-- dump date 20140620_010547 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 1215088000001 SEQ_END SEQ_END NC_019905.1 5875750 5875750 DR NC_019905.1; contig end 5875750..5875750 Pseudomonas putida HB3267 1215088000002 SEQ_END SEQ_END NC_019906.1 80360 80360 DR NC_019906.1; contig end 80360..80360 Pseudomonas putida HB3267 YP_007226862.1 CDS B479_00005 NC_019905.1 5874729 664 R COG2217 Cation transport ATPase; mercuric reductase complement(join(5874729..5875750,1..664)) Pseudomonas putida HB3267 14291773 YP_007226863.1 CDS B479_00010 NC_019905.1 736 1011 R COG2608 Copper chaperone; MerP complement(736..1011) Pseudomonas putida HB3267 14286412 YP_007226864.1 CDS B479_00015 NC_019905.1 1024 1374 R COG0463 Glycosyltransferases involved in cell wall biogenesis; mercuric transport protein complement(1024..1374) Pseudomonas putida HB3267 14291772 YP_007226865.1 CDS B479_00020 NC_019905.1 1446 1880 D COG0789 Predicted transcriptional regulators; transcriptional regulator MerR 1446..1880 Pseudomonas putida HB3267 14286413 YP_007226866.1 CDS B479_00025 NC_019905.1 1943 4204 D COG4644 Transposase and inactivated derivatives, TnpA family; transposase 1943..4204 Pseudomonas putida HB3267 14286414 YP_007226867.1 CDS B479_00030 NC_019905.1 4340 4753 D COG3192 Ethanolamine utilization protein; ethanolamine utilization protein EutH 4340..4753 Pseudomonas putida HB3267 14286415 YP_007226868.1 CDS B479_00035 NC_019905.1 4773 5642 D COG2771 DNA-binding HTH domain-containing proteins; LuxR family transcriptional regulator 4773..5642 Pseudomonas putida HB3267 14286416 YP_007226869.1 CDS B479_00040 NC_019905.1 5667 7412 R COG3217 Uncharacterized Fe-S protein; oxidoreductase, FAD-binding/iron-sulfur cluster binding protein complement(5667..7412) Pseudomonas putida HB3267 14286417 YP_007226870.1 CDS B479_00045 NC_019905.1 7631 9121 R COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase complement(7631..9121) Pseudomonas putida HB3267 14286418 YP_007226871.1 CDS B479_00050 NC_019905.1 9134 10027 R COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthase complement(9134..10027) Pseudomonas putida HB3267 14286419 YP_007226872.1 CDS B479_00055 NC_019905.1 10099 11427 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(10099..11427) Pseudomonas putida HB3267 14286420 YP_007226873.1 CDS B479_00060 NC_019905.1 11612 12931 R COG0665 Glycine/D-amino acid oxidases (deaminating); FAD dependent oxidoreductase complement(11612..12931) Pseudomonas putida HB3267 14286421 YP_007226874.1 CDS B479_00065 NC_019905.1 13026 13748 R COG1802 Transcriptional regulators; GntR family transcriptional regulator complement(13026..13748) Pseudomonas putida HB3267 14286422 YP_007226875.1 CDS B479_00070 NC_019905.1 14088 14780 D COG1802 Transcriptional regulators; transcriptional regulator protein 14088..14780 Pseudomonas putida HB3267 14286423 YP_007226876.1 CDS B479_00075 NC_019905.1 14907 15758 D COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components; ABC transporter substrate binding protein (glycine-betaine) 14907..15758 Pseudomonas putida HB3267 14286424 YP_007226877.1 CDS B479_00080 NC_019905.1 15833 16945 D COG4175 ABC-type proline/glycine betaine transport system, ATPase component; glycine betaine/L-proline ABC transporter 15833..16945 Pseudomonas putida HB3267 14286425 YP_007226878.1 CDS B479_00085 NC_019905.1 16942 17799 D COG4176 ABC-type proline/glycine betaine transport system, permease component; protein ProW 16942..17799 Pseudomonas putida HB3267 14286426 YP_007226879.1 CDS B479_00090 NC_019905.1 17786 18637 D COG4176 ABC-type proline/glycine betaine transport system, permease component; protein ProW 17786..18637 Pseudomonas putida HB3267 14286427 YP_007226880.1 CDS B479_00095 NC_019905.1 18703 19743 D COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; putative transcriptional regulator 18703..19743 Pseudomonas putida HB3267 14286428 YP_007226881.1 CDS B479_00100 NC_019905.1 19787 21010 R COG1113 Gamma-aminobutyrate permease and related permeases; GABA permease complement(19787..21010) Pseudomonas putida HB3267 14286429 YP_007226882.1 CDS B479_00105 NC_019905.1 21339 22241 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein complement(21339..22241) Pseudomonas putida HB3267 14286430 YP_007226883.1 CDS B479_00110 NC_019905.1 23044 24897 D COG1061 DNA or RNA helicases of superfamily II; hypothetical protein 23044..24897 Pseudomonas putida HB3267 14286431 YP_007226884.1 CDS B479_00115 NC_019905.1 24894 25322 D hypothetical protein 24894..25322 Pseudomonas putida HB3267 14286432 YP_007226885.1 CDS B479_00120 NC_019905.1 25353 25754 R hypothetical protein complement(25353..25754) Pseudomonas putida HB3267 14286433 YP_007226886.1 CDS B479_00125 NC_019905.1 28447 28671 R hypothetical protein complement(28447..28671) Pseudomonas putida HB3267 14286434 YP_007226887.1 CDS B479_00130 NC_019905.1 29936 31396 R Tn7-like transposition protein C complement(29936..31396) Pseudomonas putida HB3267 14286435 YP_007226888.1 CDS B479_00135 NC_019905.1 31393 33561 R COG2801 Transposase and inactivated derivatives; Tn7-like transposition protein B complement(31393..33561) Pseudomonas putida HB3267 14286436 YP_007226889.1 CDS B479_00140 NC_019905.1 33558 34412 R hypothetical protein complement(33558..34412) Pseudomonas putida HB3267 14286437 YP_007226890.1 CDS B479_00145 NC_019905.1 34695 36530 R COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains; glucosamine--fructose-6-phosphate aminotransferase complement(34695..36530) Pseudomonas putida HB3267 14286438 YP_007226891.1 CDS B479_00150 NC_019905.1 36534 37310 R COG1349 Transcriptional regulators of sugar metabolism; DeoR family transcriptional regulator complement(36534..37310) Pseudomonas putida HB3267 14286439 YP_007226892.1 CDS B479_00155 NC_019905.1 37617 38984 R COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); UDP-N-acetylglucosamine pyrophosphorylase complement(37617..38984) Pseudomonas putida HB3267 14286440 YP_007226893.1 CDS atpC NC_019905.1 39107 39526 R COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit); F0F1 ATP synthase subunit epsilon complement(39107..39526) Pseudomonas putida HB3267 14286441 YP_007226894.1 CDS B479_00165 NC_019905.1 39570 40946 R COG0055 F0F1-type ATP synthase, beta subunit; F0F1 ATP synthase subunit beta complement(39570..40946) Pseudomonas putida HB3267 14286442 YP_007226895.1 CDS B479_00170 NC_019905.1 40974 41834 R COG0224 F0F1-type ATP synthase, gamma subunit; F0F1 ATP synthase subunit gamma complement(40974..41834) Pseudomonas putida HB3267 14286443 YP_007226896.1 CDS B479_00175 NC_019905.1 41883 43427 R COG0056 F0F1-type ATP synthase, alpha subunit; F0F1 ATP synthase subunit alpha complement(41883..43427) Pseudomonas putida HB3267 14286444 YP_007226897.1 CDS B479_00180 NC_019905.1 43449 43985 R COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein); F0F1 ATP synthase subunit delta complement(43449..43985) Pseudomonas putida HB3267 14286445 YP_007226898.1 CDS B479_00185 NC_019905.1 43998 44468 R COG0711 F0F1-type ATP synthase, subunit b; F0F1 ATP synthase subunit B complement(43998..44468) Pseudomonas putida HB3267 14286446 YP_007226899.1 CDS B479_00190 NC_019905.1 44525 44782 R COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K; F0F1 ATP synthase subunit C complement(44525..44782) Pseudomonas putida HB3267 14286447 YP_007226900.1 CDS B479_00195 NC_019905.1 44927 45796 R COG0356 F0F1-type ATP synthase, subunit a; F0F1 ATP synthase subunit A complement(44927..45796) Pseudomonas putida HB3267 14286448 YP_007226901.1 CDS B479_00200 NC_019905.1 45813 46220 R COG3312 F0F1-type ATP synthase, subunit I; F0F1 ATP synthase subunit I complement(45813..46220) Pseudomonas putida HB3267 14286449 YP_007226902.1 CDS B479_00205 NC_019905.1 46370 47242 R COG1475 Predicted transcriptional regulators; ParB family partitioning protein complement(46370..47242) Pseudomonas putida HB3267 14286450 YP_007226903.1 CDS B479_00210 NC_019905.1 47252 48043 R COG1192 ATPases involved in chromosome partitioning; cobyrinic acid ac-diamide synthase complement(47252..48043) Pseudomonas putida HB3267 14286451 YP_007226904.1 CDS gidB NC_019905.1 48062 48712 R COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division; 16S rRNA methyltransferase GidB complement(48062..48712) Pseudomonas putida HB3267 14286452 YP_007226905.1 CDS B479_00220 NC_019905.1 48709 50601 R COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA complement(48709..50601) Pseudomonas putida HB3267 14286453 YP_007226906.1 CDS trmE NC_019905.1 51172 52542 R COG0486 Predicted GTPase; tRNA modification GTPase TrmE complement(51172..52542) Pseudomonas putida HB3267 14286454 YP_007226907.1 CDS B479_00230 NC_019905.1 52630 54312 R COG0706 Preprotein translocase subunit YidC; membrane protein insertase complement(52630..54312) Pseudomonas putida HB3267 14286455 YP_007226908.1 CDS B479_00235 NC_019905.1 54315 54560 R COG0759 Uncharacterized conserved protein; hypothetical protein complement(54315..54560) Pseudomonas putida HB3267 14286456 YP_007226909.1 CDS rnpA NC_019905.1 54553 54957 R COG0594 RNase P protein component; ribonuclease P complement(54553..54957) Pseudomonas putida HB3267 14286457 YP_007226910.1 CDS rpmH NC_019905.1 54971 55105 R COG0230 Ribosomal protein L34; 50S ribosomal protein L34 complement(54971..55105) Pseudomonas putida HB3267 14286458 YP_007226911.1 CDS dnaA NC_019905.1 55701 57227 D COG0593 ATPase involved in DNA replication initiation; chromosomal replication initiation protein 55701..57227 Pseudomonas putida HB3267 14286459 YP_007226912.1 CDS B479_00255 NC_019905.1 57268 58371 D COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); DNA polymerase III subunit beta 57268..58371 Pseudomonas putida HB3267 14286460 YP_007226913.1 CDS recF NC_019905.1 58387 59490 D COG1195 Recombinational DNA repair ATPase (RecF pathway); recombination protein F 58387..59490 Pseudomonas putida HB3267 14286461 YP_007226914.1 CDS gyrB NC_019905.1 59495 61915 D COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA gyrase subunit B 59495..61915 Pseudomonas putida HB3267 14286462 YP_007226915.1 CDS B479_00270 NC_019905.1 62752 63390 D hypothetical protein 62752..63390 Pseudomonas putida HB3267 14286463 YP_007226916.1 CDS B479_00275 NC_019905.1 63371 65329 D COG2801 Transposase and inactivated derivatives; integrase catalytic region 63371..65329 Pseudomonas putida HB3267 14286464 YP_007226917.1 CDS B479_00280 NC_019905.1 65326 66285 D COG2842 Uncharacterized ATPase, putative transposase; ATPase AAA 65326..66285 Pseudomonas putida HB3267 14286465 YP_007226918.1 CDS B479_00285 NC_019905.1 66748 68277 D hypothetical protein 66748..68277 Pseudomonas putida HB3267 14286466 YP_007226919.1 CDS B479_00290 NC_019905.1 68334 68693 D hypothetical protein 68334..68693 Pseudomonas putida HB3267 14286467 YP_007226920.1 CDS B479_00295 NC_019905.1 69065 69397 D hypothetical protein 69065..69397 Pseudomonas putida HB3267 14286468 YP_007226921.1 CDS B479_00300 NC_019905.1 69495 69950 R COG3019 Predicted metal-binding protein; hypothetical protein complement(69495..69950) Pseudomonas putida HB3267 14286469 YP_007226922.1 CDS B479_00305 NC_019905.1 69940 70719 R COG2010 Cytochrome c, mono- and diheme variants; hypothetical protein complement(69940..70719) Pseudomonas putida HB3267 14286470 YP_007226923.1 CDS B479_00310 NC_019905.1 70729 71742 R COG3667 Uncharacterized protein involved in copper resistance; copper resistance B complement(70729..71742) Pseudomonas putida HB3267 14286471 YP_007226924.1 CDS B479_00315 NC_019905.1 71834 72175 R hypothetical protein complement(71834..72175) Pseudomonas putida HB3267 14286472 YP_007226925.1 CDS B479_00320 NC_019905.1 72172 74130 R COG2132 Putative multicopper oxidases; CopA family copper resistance protein complement(72172..74130) Pseudomonas putida HB3267 14286473 YP_007226926.1 CDS B479_00325 NC_019905.1 74313 74519 R hypothetical protein complement(74313..74519) Pseudomonas putida HB3267 14286474 YP_007226927.1 CDS B479_00330 NC_019905.1 74686 75363 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component heavy metal response transcriptional regulator 74686..75363 Pseudomonas putida HB3267 14286475 YP_007226928.1 CDS B479_00335 NC_019905.1 75363 76769 D COG0642 Signal transduction histidine kinase; heavy metal sensor signal transduction histidine kinase 75363..76769 Pseudomonas putida HB3267 14286476 YP_007226929.1 CDS B479_00340 NC_019905.1 77240 78493 D COG1538 Outer membrane protein; outer membrane efflux protein 77240..78493 Pseudomonas putida HB3267 14286477 YP_007226930.1 CDS B479_00345 NC_019905.1 78490 79956 D COG0845 Membrane-fusion protein; RND family efflux transporter MFP subunit 78490..79956 Pseudomonas putida HB3267 14286478 YP_007226931.1 CDS B479_00350 NC_019905.1 79953 83111 D COG3696 Putative silver efflux pump; CzcA family heavy metal efflux protein 79953..83111 Pseudomonas putida HB3267 14286479 YP_007226932.1 CDS B479_00355 NC_019905.1 83108 83455 D COG5569 Uncharacterized conserved protein; hypothetical protein 83108..83455 Pseudomonas putida HB3267 14286480 YP_007226933.1 CDS B479_00360 NC_019905.1 83870 84529 R COG2020 Putative protein-S-isoprenylcysteine methyltransferase; isoprenylcysteine carboxyl methyltransferase complement(83870..84529) Pseudomonas putida HB3267 14286481 YP_007226934.1 CDS B479_00365 NC_019905.1 84547 84753 D hypothetical protein 84547..84753 Pseudomonas putida HB3267 14286482 YP_007226935.1 CDS B479_00370 NC_019905.1 84827 85282 R hypothetical protein complement(84827..85282) Pseudomonas putida HB3267 14286483 YP_007226936.1 CDS B479_00375 NC_019905.1 85421 86443 R COG3391 Uncharacterized conserved protein; hypothetical protein complement(85421..86443) Pseudomonas putida HB3267 14286484 YP_007226937.1 CDS B479_00380 NC_019905.1 86709 86909 R COG2608 Copper chaperone; heavy metal transport/detoxification protein complement(86709..86909) Pseudomonas putida HB3267 14286485 YP_007226938.1 CDS B479_00385 NC_019905.1 87247 89640 R COG2217 Cation transport ATPase; copper-translocating P-type ATPase complement(87247..89640) Pseudomonas putida HB3267 14286486 YP_007226939.1 CDS B479_00390 NC_019905.1 89825 89983 R hypothetical protein complement(89825..89983) Pseudomonas putida HB3267 14286487 YP_007226940.1 CDS B479_00395 NC_019905.1 90052 90258 D putative transcriptional regulator 90052..90258 Pseudomonas putida HB3267 14286488 YP_007226941.1 CDS B479_00400 NC_019905.1 90790 91809 D hypothetical protein 90790..91809 Pseudomonas putida HB3267 14286489 YP_007226942.1 CDS B479_00405 NC_019905.1 91993 92325 R hypothetical protein complement(91993..92325) Pseudomonas putida HB3267 14286490 YP_007226943.1 CDS B479_00410 NC_019905.1 92556 92744 R COG0846 NAD-dependent protein deacetylases, SIR2 family; silent information regulator protein Sir2 complement(92556..92744) Pseudomonas putida HB3267 14286491 YP_007226944.1 CDS B479_00415 NC_019905.1 93551 94207 D hypothetical protein 93551..94207 Pseudomonas putida HB3267 14286492 YP_007226945.1 CDS B479_00420 NC_019905.1 94620 94928 D hypothetical protein 94620..94928 Pseudomonas putida HB3267 14286493 YP_007226946.1 CDS B479_00425 NC_019905.1 95085 95273 D hypothetical protein 95085..95273 Pseudomonas putida HB3267 14286494 YP_007226947.1 CDS B479_00430 NC_019905.1 95494 95703 D hypothetical protein 95494..95703 Pseudomonas putida HB3267 14286495 YP_007226948.1 CDS B479_00435 NC_019905.1 95718 95924 D hypothetical protein 95718..95924 Pseudomonas putida HB3267 14286496 YP_007226949.1 CDS B479_00440 NC_019905.1 96067 96195 R hypothetical protein complement(96067..96195) Pseudomonas putida HB3267 14286497 YP_007226950.1 CDS B479_00445 NC_019905.1 96318 98015 R COG2194 Predicted membrane-associated, metal-dependent hydrolase; hypothetical protein complement(96318..98015) Pseudomonas putida HB3267 14286498 YP_007226951.1 CDS B479_00450 NC_019905.1 98962 99804 D COG1230 Co/Zn/Cd efflux system component; cation diffusion facilitator family transporter 98962..99804 Pseudomonas putida HB3267 14286499 YP_007226952.1 CDS B479_00455 NC_019905.1 99962 100312 D hypothetical protein 99962..100312 Pseudomonas putida HB3267 14286500 YP_007226953.1 CDS B479_00460 NC_019905.1 100345 100422 R hypothetical protein complement(100345..100422) Pseudomonas putida HB3267 14286501 YP_007226954.1 CDS B479_00465 NC_019905.1 101369 102043 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component heavy metal response transcriptional regulator 101369..102043 Pseudomonas putida HB3267 14286502 YP_007226955.1 CDS B479_00470 NC_019905.1 102040 103458 D COG0642 Signal transduction histidine kinase; heavy metal sensor signal transduction histidine kinase 102040..103458 Pseudomonas putida HB3267 14286503 YP_007226956.1 CDS B479_00475 NC_019905.1 103516 104103 R hypothetical protein complement(103516..104103) Pseudomonas putida HB3267 14286504 YP_007226957.1 CDS B479_00480 NC_019905.1 104370 104591 D hypothetical protein 104370..104591 Pseudomonas putida HB3267 14286505 YP_007226958.1 CDS B479_00485 NC_019905.1 104674 106128 R COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family; glycosyl transferase family protein complement(104674..106128) Pseudomonas putida HB3267 14286506 YP_007226959.1 CDS B479_00490 NC_019905.1 106122 107054 R COG0463 Glycosyltransferases involved in cell wall biogenesis; ribonuclease III complement(106122..107054) Pseudomonas putida HB3267 14286507 YP_007226960.1 CDS B479_00495 NC_019905.1 107071 107490 R COG2246 Predicted membrane protein; GtrA family protein complement(107071..107490) Pseudomonas putida HB3267 14286508 YP_007226961.1 CDS B479_00500 NC_019905.1 107748 108716 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 107748..108716 Pseudomonas putida HB3267 14286509 YP_007226962.1 CDS B479_00505 NC_019905.1 108927 110234 D COG3746 Phosphate-selective porin; phosphate-selective porin O and P 108927..110234 Pseudomonas putida HB3267 14286510 YP_007226963.1 CDS B479_00510 NC_019905.1 110533 111558 D hypothetical protein 110533..111558 Pseudomonas putida HB3267 14286511 YP_007226964.1 CDS B479_00515 NC_019905.1 111686 111910 D hypothetical protein 111686..111910 Pseudomonas putida HB3267 14286512 YP_007226965.1 CDS B479_00520 NC_019905.1 112003 114000 R COG2217 Cation transport ATPase; heavy metal translocating P-type ATPase complement(112003..114000) Pseudomonas putida HB3267 14286513 YP_007226966.1 CDS B479_00525 NC_019905.1 114203 114526 R hypothetical protein complement(114203..114526) Pseudomonas putida HB3267 14286514 YP_007226967.1 CDS B479_00530 NC_019905.1 114689 117850 R COG3696 Putative silver efflux pump; CzcA family heavy metal efflux protein complement(114689..117850) Pseudomonas putida HB3267 14286515 YP_007226968.1 CDS B479_00535 NC_019905.1 117875 119125 R COG0845 Membrane-fusion protein; RND family efflux transporter MFP subunit complement(117875..119125) Pseudomonas putida HB3267 14286516 YP_007226969.1 CDS B479_00540 NC_019905.1 119194 120321 R COG1538 Outer membrane protein; outer membrane efflux protein complement(119194..120321) Pseudomonas putida HB3267 14286517 YP_007226970.1 CDS B479_00545 NC_019905.1 120869 122212 D outer membrane porin 120869..122212 Pseudomonas putida HB3267 14286518 YP_007226971.1 CDS B479_00550 NC_019905.1 122701 123375 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component heavy metal response transcriptional regulator 122701..123375 Pseudomonas putida HB3267 14286519 YP_007226972.1 CDS B479_00555 NC_019905.1 123918 124445 R hypothetical protein complement(123918..124445) Pseudomonas putida HB3267 14286520 YP_007226973.1 CDS B479_00560 NC_019905.1 126115 126564 R hypothetical protein complement(126115..126564) Pseudomonas putida HB3267 14286521 YP_007226974.1 CDS B479_00565 NC_019905.1 128100 129794 D COG4951 Uncharacterized protein conserved in bacteria; DEAD/DEAH box helicase, putative 128100..129794 Pseudomonas putida HB3267 14286522 YP_007226975.1 CDS B479_00570 NC_019905.1 130068 130439 R COG5499 Predicted transcription regulator containing HTH domain; DNA-binding protein complement(130068..130439) Pseudomonas putida HB3267 14286523 YP_007226976.1 CDS B479_00575 NC_019905.1 130446 130748 R COG4680 Uncharacterized protein conserved in bacteria; hypothetical protein complement(130446..130748) Pseudomonas putida HB3267 14286524 YP_007226977.1 CDS B479_00580 NC_019905.1 130839 131246 R COG5455 Predicted integral membrane protein; hypothetical protein complement(130839..131246) Pseudomonas putida HB3267 14286525 YP_007226978.1 CDS B479_00585 NC_019905.1 131474 132766 R COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains; sigma-54 dependent transcription regulator complement(131474..132766) Pseudomonas putida HB3267 14286526 YP_007226979.1 CDS B479_00590 NC_019905.1 132989 133873 D COG0491 Zn-dependent hydrolases, including glyoxylases; beta-lactamase domain-containing protein 132989..133873 Pseudomonas putida HB3267 14286527 YP_007226980.1 CDS B479_00595 NC_019905.1 133913 135184 D COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 133913..135184 Pseudomonas putida HB3267 14286528 YP_007226981.1 CDS B479_00600 NC_019905.1 135181 135999 D COG0730 Predicted permeases; hypothetical protein 135181..135999 Pseudomonas putida HB3267 14286529 YP_007226982.1 CDS B479_00605 NC_019905.1 135988 136875 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(135988..136875) Pseudomonas putida HB3267 14286530 YP_007226983.1 CDS B479_00610 NC_019905.1 137097 138743 D COG2303 Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase 137097..138743 Pseudomonas putida HB3267 14286531 YP_007226984.1 CDS B479_00615 NC_019905.1 138842 140461 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 138842..140461 Pseudomonas putida HB3267 14286532 YP_007226985.1 CDS B479_00620 NC_019905.1 140661 141431 R COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; phospholipid/glycerol acyltransferase complement(140661..141431) Pseudomonas putida HB3267 14286533 YP_007226986.1 CDS B479_00625 NC_019905.1 141493 142020 R COG0241 Histidinol phosphatase and related phosphatases; D,D-heptose 1,7-bisphosphate phosphatase complement(141493..142020) Pseudomonas putida HB3267 14286534 YP_007226987.1 CDS glyS NC_019905.1 142024 144075 R COG0751 Glycyl-tRNA synthetase, beta subunit; glycyl-tRNA ligase subunit beta complement(142024..144075) Pseudomonas putida HB3267 14286535 YP_007226988.1 CDS glyQ NC_019905.1 144072 145019 R COG0752 Glycyl-tRNA synthetase, alpha subunit; glycyl-tRNA ligase subunit alpha complement(144072..145019) Pseudomonas putida HB3267 14286536 YP_007226989.1 CDS B479_00640 NC_019905.1 145103 145654 D COG2818 3-methyladenine DNA glycosylase; DNA-3-methyladenine glycosylase I 145103..145654 Pseudomonas putida HB3267 14286537 YP_007226990.1 CDS B479_00645 NC_019905.1 145696 146583 D COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis lauroyl acyltransferase 145696..146583 Pseudomonas putida HB3267 14286538 YP_007226991.1 CDS B479_00650 NC_019905.1 146681 146995 R COG0457 FOG: TPR repeat; hypothetical protein complement(146681..146995) Pseudomonas putida HB3267 14286539 YP_007226992.1 CDS trkA NC_019905.1 147007 148380 R COG0569 K+ transport systems, NAD-binding component; potassium transporter peripheral membrane component complement(147007..148380) Pseudomonas putida HB3267 14286540 YP_007226993.1 CDS B479_00660 NC_019905.1 148404 149714 R COG0144 tRNA and rRNA cytosine-C5-methylases; 16S rRNA methyltransferase B complement(148404..149714) Pseudomonas putida HB3267 14286541 YP_007226994.1 CDS fmt NC_019905.1 149711 150643 R COG0223 Methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(149711..150643) Pseudomonas putida HB3267 14286542 YP_007226995.1 CDS def NC_019905.1 150704 151210 R COG0242 N-formylmethionyl-tRNA deformylase; peptide deformylase complement(150704..151210) Pseudomonas putida HB3267 14286543 YP_007226996.1 CDS B479_00675 NC_019905.1 151418 152515 D COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; DNA protecting protein DprA 151418..152515 Pseudomonas putida HB3267 14286544 YP_007226997.1 CDS B479_00680 NC_019905.1 152558 153115 D COG0009 Putative translation factor (SUA5); SUA5/yciO/yrdC domain-containing protein 152558..153115 Pseudomonas putida HB3267 14286545 YP_007226998.1 CDS B479_00685 NC_019905.1 153541 153867 D hypothetical protein 153541..153867 Pseudomonas putida HB3267 14286546 YP_007226999.1 CDS B479_00690 NC_019905.1 154027 155004 R COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases; alcohol dehydrogenase complement(154027..155004) Pseudomonas putida HB3267 14286547 YP_007227000.1 CDS B479_00695 NC_019905.1 155139 156050 D COG0408 Coproporphyrinogen III oxidase; coproporphyrinogen III oxidase 155139..156050 Pseudomonas putida HB3267 14286548 YP_007227001.1 CDS aroE NC_019905.1 156076 156900 D COG0169 Shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 156076..156900 Pseudomonas putida HB3267 14286549 YP_007227002.1 CDS B479_00705 NC_019905.1 157014 158579 R COG0659 Sulfate permease and related transporters (MFS superfamily); sulfate transporter complement(157014..158579) Pseudomonas putida HB3267 14286550 YP_007227003.1 CDS B479_00710 NC_019905.1 158709 159638 R COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components; glycine betaine ABC transporter substrate-binding protein complement(158709..159638) Pseudomonas putida HB3267 14286551 YP_007227004.1 CDS B479_00715 NC_019905.1 159653 161170 R COG3119 Arylsulfatase A and related enzymes; choline-sulfatase complement(159653..161170) Pseudomonas putida HB3267 14286552 YP_007227005.1 CDS B479_00720 NC_019905.1 161169 161270 D hypothetical protein 161169..161270 Pseudomonas putida HB3267 14286553 YP_007227006.1 CDS B479_00725 NC_019905.1 161279 162178 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 161279..162178 Pseudomonas putida HB3267 14286554 YP_007227007.1 CDS B479_00730 NC_019905.1 162299 162916 R COG2910 Putative NADH-flavin reductase; hypothetical protein complement(162299..162916) Pseudomonas putida HB3267 14286555 YP_007227008.1 CDS B479_00735 NC_019905.1 162969 163301 D COG3805 Aromatic ring-cleaving dioxygenase; DOPA 45-dioxygenase 162969..163301 Pseudomonas putida HB3267 14286556 YP_007227009.1 CDS trpA NC_019905.1 163422 164231 R COG0159 Tryptophan synthase alpha chain; tryptophan synthase subunit alpha complement(163422..164231) Pseudomonas putida HB3267 14286557 YP_007227010.1 CDS B479_00745 NC_019905.1 164228 165445 R COG0133 Tryptophan synthase beta chain; tryptophan synthase subunit beta complement(164228..165445) Pseudomonas putida HB3267 14286558 YP_007227011.1 CDS B479_00750 NC_019905.1 165557 166453 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 165557..166453 Pseudomonas putida HB3267 14286559 YP_007227012.1 CDS B479_00755 NC_019905.1 166450 166773 R COG4575 Uncharacterized conserved protein; hypothetical protein complement(166450..166773) Pseudomonas putida HB3267 14286560 YP_007227013.1 CDS B479_00760 NC_019905.1 166924 167139 D COG3360 Uncharacterized conserved protein; hypothetical protein 166924..167139 Pseudomonas putida HB3267 14286561 YP_007227014.1 CDS B479_00765 NC_019905.1 167241 167462 D hypothetical protein 167241..167462 Pseudomonas putida HB3267 14286562 YP_007227015.1 CDS B479_00770 NC_019905.1 167561 168565 R COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; luciferase-like monooxygenase complement(167561..168565) Pseudomonas putida HB3267 14286563 YP_007227016.1 CDS B479_00775 NC_019905.1 168719 169144 D COG1764 Predicted redox protein, regulator of disulfide bond formation; OsmC family protein 168719..169144 Pseudomonas putida HB3267 14286564 YP_007227017.1 CDS B479_00780 NC_019905.1 169218 169451 D hypothetical protein 169218..169451 Pseudomonas putida HB3267 14286565 YP_007227018.1 CDS B479_00785 NC_019905.1 169572 169985 R lipoprotein complement(169572..169985) Pseudomonas putida HB3267 14286566 YP_007227019.1 CDS B479_00790 NC_019905.1 170041 170454 R lipoprotein complement(170041..170454) Pseudomonas putida HB3267 14286567 YP_007227020.1 CDS B479_00795 NC_019905.1 170540 171613 D COG4324 Predicted aminopeptidase; hypothetical protein 170540..171613 Pseudomonas putida HB3267 14286568 YP_007227021.1 CDS B479_00800 NC_019905.1 171750 172400 R COG0546 Predicted phosphatases; HAD family hydrolase complement(171750..172400) Pseudomonas putida HB3267 14286569 YP_007227022.1 CDS B479_00805 NC_019905.1 172520 173068 R COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily; carbonic anhydrase complement(172520..173068) Pseudomonas putida HB3267 14286570 YP_007227023.1 CDS B479_00810 NC_019905.1 173171 175222 D COG0339 Zn-dependent oligopeptidases; oligopeptidase A 173171..175222 Pseudomonas putida HB3267 14286571 YP_007227024.1 CDS B479_00815 NC_019905.1 175219 175500 D COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain; hypothetical protein 175219..175500 Pseudomonas putida HB3267 14286572 YP_007227025.1 CDS B479_00820 NC_019905.1 175625 177619 D COG0339 Zn-dependent oligopeptidases; peptidase M3A and M3B, thimet/oligopeptidase F 175625..177619 Pseudomonas putida HB3267 14286573 YP_007227026.1 CDS B479_00825 NC_019905.1 177697 178755 D COG1533 DNA repair photolyase; radical SAM domain-containing protein 177697..178755 Pseudomonas putida HB3267 14286574 YP_007227027.1 CDS B479_00830 NC_019905.1 179178 179897 D COG0288 Carbonic anhydrase; carbonate dehydratase 179178..179897 Pseudomonas putida HB3267 14286575 YP_007227028.1 CDS B479_00835 NC_019905.1 180090 181622 D COG0659 Sulfate permease and related transporters (MFS superfamily); sulfate transporter 180090..181622 Pseudomonas putida HB3267 14286576 YP_007227029.1 CDS B479_00840 NC_019905.1 182765 183892 D COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2; cytochrome c oxidase subunit II 182765..183892 Pseudomonas putida HB3267 14286577 YP_007227030.1 CDS B479_00845 NC_019905.1 183936 185525 D COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; cytochrome c oxidase subunit I 183936..185525 Pseudomonas putida HB3267 14286578 YP_007227031.1 CDS B479_00850 NC_019905.1 185536 186102 D COG3175 Cytochrome oxidase assembly factor; cytochrome C oxidase assembly protein 185536..186102 Pseudomonas putida HB3267 14286579 YP_007227032.1 CDS B479_00855 NC_019905.1 186119 187006 D COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3; cytochrome c oxidase subunit III 186119..187006 Pseudomonas putida HB3267 14286580 YP_007227033.1 CDS B479_00860 NC_019905.1 187117 187320 R hypothetical protein complement(187117..187320) Pseudomonas putida HB3267 14286581 YP_007227034.1 CDS B479_00865 NC_019905.1 187384 188121 D COG3346 Uncharacterized conserved protein; hypothetical protein 187384..188121 Pseudomonas putida HB3267 14286582 YP_007227035.1 CDS B479_00870 NC_019905.1 188090 188671 D hypothetical protein 188090..188671 Pseudomonas putida HB3267 14286583 YP_007227036.1 CDS B479_00875 NC_019905.1 188681 189760 D COG1612 Uncharacterized protein required for cytochrome oxidase assembly; cytochrome oxidase assembly 188681..189760 Pseudomonas putida HB3267 14286584 YP_007227037.1 CDS B479_00880 NC_019905.1 189745 190638 D COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor); protoheme IX farnesyltransferase 189745..190638 Pseudomonas putida HB3267 14286585 YP_007227038.1 CDS B479_00885 NC_019905.1 190635 191267 D COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems; electron transport protein SCO1/SenC 190635..191267 Pseudomonas putida HB3267 14286586 YP_007227039.1 CDS B479_00890 NC_019905.1 191478 192248 R COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; NLPA lipoprotein complement(191478..192248) Pseudomonas putida HB3267 14286587 YP_007227040.1 CDS B479_00895 NC_019905.1 192313 192984 R COG2011 ABC-type metal ion transport system, permease component; binding-protein-dependent transport system inner membrane protein complement(192313..192984) Pseudomonas putida HB3267 14286588 YP_007227041.1 CDS metN NC_019905.1 192984 193991 R COG1135 ABC-type metal ion transport system, ATPase component; DL-methionine transporter ATP-binding subunit complement(192984..193991) Pseudomonas putida HB3267 14286589 YP_007227042.1 CDS katE NC_019905.1 194219 196354 D COG0753 Catalase; hydroperoxidase II 194219..196354 Pseudomonas putida HB3267 14286590 YP_007227043.1 CDS B479_00910 NC_019905.1 196464 197171 R lipoprotein complement(196464..197171) Pseudomonas putida HB3267 14286591 YP_007227044.1 CDS B479_00915 NC_019905.1 197299 198081 R COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; zinc ABC transporter permease complement(197299..198081) Pseudomonas putida HB3267 14286592 YP_007227045.1 CDS B479_00920 NC_019905.1 198074 198850 R COG1121 ABC-type Mn/Zn transport systems, ATPase component; zinc ABC transporter ATP-binding protein complement(198074..198850) Pseudomonas putida HB3267 14286593 YP_007227046.1 CDS B479_00925 NC_019905.1 198847 199332 R COG0735 Fe2+/Zn2+ uptake regulation proteins; ferric uptake regulator family protein complement(198847..199332) Pseudomonas putida HB3267 14286594 YP_007227047.1 CDS B479_00930 NC_019905.1 199399 200307 D COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin; periplasmic solute binding protein 199399..200307 Pseudomonas putida HB3267 14286595 YP_007227048.1 CDS B479_00935 NC_019905.1 200621 201571 R COG2334 Putative homoserine kinase type II (protein kinase fold); homoserine kinase complement(200621..201571) Pseudomonas putida HB3267 14286596 YP_007227049.1 CDS B479_00940 NC_019905.1 201641 201928 R hypothetical protein complement(201641..201928) Pseudomonas putida HB3267 14286597 YP_007227050.1 CDS B479_00945 NC_019905.1 202004 204751 D COG0258 5'-3' exonuclease (including N-terminal domain of PolI); DNA polymerase I 202004..204751 Pseudomonas putida HB3267 14286598 YP_007227051.1 CDS engB NC_019905.1 205174 205806 R COG0218 Predicted GTPase; GTP-binding protein YsxC complement(205174..205806) Pseudomonas putida HB3267 14286599 YP_007227052.1 CDS B479_00955 NC_019905.1 206008 206310 D COG3245 Cytochrome c5; Cytochrome c-type protein 206008..206310 Pseudomonas putida HB3267 14286600 YP_007227053.1 CDS B479_00960 NC_019905.1 206342 206959 D COG2863 Cytochrome c553; cytochrome c4 206342..206959 Pseudomonas putida HB3267 14286601 YP_007227054.1 CDS B479_00965 NC_019905.1 207134 207766 D COG0526 Thiol-disulfide isomerase and thioredoxins; thiol:disulfide interchange protein DsbA 207134..207766 Pseudomonas putida HB3267 14286602 YP_007227055.1 CDS B479_00970 NC_019905.1 207779 208633 D COG3568 Metal-dependent hydrolase; endonuclease/exonuclease/phosphatase 207779..208633 Pseudomonas putida HB3267 14286603 YP_007227056.1 CDS B479_00975 NC_019905.1 208661 210604 D COG2199 FOG: GGDEF domain; diguanylate cyclase 208661..210604 Pseudomonas putida HB3267 14286604 YP_007227057.1 CDS B479_00980 NC_019905.1 210685 211473 D COG3023 Negative regulator of beta-lactamase expression; N-acetylmuramoyl-L-alanine amidase 210685..211473 Pseudomonas putida HB3267 14286605 YP_007227058.1 CDS B479_00985 NC_019905.1 211596 213200 D COG4943 Predicted signal transduction protein containing sensor and EAL domains; EAL domain-containing protein 211596..213200 Pseudomonas putida HB3267 14286606 YP_007227059.1 CDS B479_00990 NC_019905.1 213241 215022 R COG0642 Signal transduction histidine kinase; multi-sensor signal transduction histidine kinase complement(213241..215022) Pseudomonas putida HB3267 14286607 YP_007227060.1 CDS B479_00995 NC_019905.1 215019 216365 R COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; two component sigma-54 specific Fis family transcriptional regulator complement(215019..216365) Pseudomonas putida HB3267 14286608 YP_007227061.1 CDS B479_01000 NC_019905.1 216577 217398 D COG2823 Predicted periplasmic or secreted lipoprotein; transport-associated protein 216577..217398 Pseudomonas putida HB3267 14286609 YP_007227062.1 CDS B479_01005 NC_019905.1 217573 217863 D hypothetical protein 217573..217863 Pseudomonas putida HB3267 14286610 YP_007227063.1 CDS B479_01010 NC_019905.1 217905 218066 D hypothetical protein 217905..218066 Pseudomonas putida HB3267 14286611 YP_007227064.1 CDS B479_01015 NC_019905.1 218069 218539 D inhibitor of vertebrate lysozyme 218069..218539 Pseudomonas putida HB3267 14286612 YP_007227065.1 CDS gltP NC_019905.1 219283 220611 D COG1301 Na+/H+-dicarboxylate symporters; glutamate/aspartate:proton symporter 219283..220611 Pseudomonas putida HB3267 14286613 YP_007227066.1 CDS B479_01025 NC_019905.1 220883 222112 D COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis.; nucleoside recognition domain-containing protein 220883..222112 Pseudomonas putida HB3267 14286614 YP_007227067.1 CDS B479_01030 NC_019905.1 222253 222879 R COG3218 ABC-type uncharacterized transport system, auxiliary component; ABC transporter auxiliary component-like protein complement(222253..222879) Pseudomonas putida HB3267 14286615 YP_007227068.1 CDS B479_01035 NC_019905.1 222876 223814 R COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component; hypothetical protein complement(222876..223814) Pseudomonas putida HB3267 14286616 YP_007227069.1 CDS B479_01040 NC_019905.1 223818 224609 R COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component; ABC transporter ATP-binding protein complement(223818..224609) Pseudomonas putida HB3267 14286617 YP_007227070.1 CDS B479_01045 NC_019905.1 224606 225730 R COG0767 ABC-type transport system involved in resistance to organic solvents, permease component; hypothetical protein complement(224606..225730) Pseudomonas putida HB3267 14286618 YP_007227071.1 CDS B479_01050 NC_019905.1 225856 226878 R hypothetical protein complement(225856..226878) Pseudomonas putida HB3267 14286619 YP_007227072.1 CDS B479_01055 NC_019905.1 227008 228408 R COG0612 Predicted Zn-dependent peptidases; peptidase M16 domain-containing protein complement(227008..228408) Pseudomonas putida HB3267 14286620 YP_007227073.1 CDS B479_01060 NC_019905.1 228439 230097 R COG1283 Na+/phosphate symporter; sodium-dependent inorganic phosphate (Pi) transporter complement(228439..230097) Pseudomonas putida HB3267 14286621 YP_007227074.1 CDS B479_01065 NC_019905.1 230292 231062 R COG0861 Membrane protein TerC, possibly involved in tellurium resistance; integral membrane protein TerC complement(230292..231062) Pseudomonas putida HB3267 14286622 YP_007227075.1 CDS B479_01070 NC_019905.1 231134 232441 R COG2851 H+/citrate symporter; CitMHS family citrate/H+ symporter complement(231134..232441) Pseudomonas putida HB3267 14286623 YP_007227076.1 CDS B479_01075 NC_019905.1 232709 233110 D COG3791 Uncharacterized conserved protein; glutathione-dependent formaldehyde-activating protein 232709..233110 Pseudomonas putida HB3267 14286624 YP_007227077.1 CDS B479_01080 NC_019905.1 233237 235192 R hypothetical protein complement(233237..235192) Pseudomonas putida HB3267 14286625 YP_007227078.1 CDS B479_01085 NC_019905.1 235189 235509 R hypothetical protein complement(235189..235509) Pseudomonas putida HB3267 14286626 YP_007227079.1 CDS B479_01090 NC_019905.1 235546 235839 R hypothetical protein complement(235546..235839) Pseudomonas putida HB3267 14286627 YP_007227080.1 CDS B479_01095 NC_019905.1 235928 236245 R hypothetical protein complement(235928..236245) Pseudomonas putida HB3267 14286628 YP_007227081.1 CDS B479_01100 NC_019905.1 236552 236767 R hypothetical protein complement(236552..236767) Pseudomonas putida HB3267 14286629 YP_007227082.1 CDS B479_01105 NC_019905.1 237161 238654 R COG0427 Acetyl-CoA hydrolase; succinate CoA transferase complement(237161..238654) Pseudomonas putida HB3267 14286630 YP_007227083.1 CDS B479_01110 NC_019905.1 238841 240277 R COG1282 NAD/NADP transhydrogenase beta subunit; NAD(P)(+) transhydrogenase complement(238841..240277) Pseudomonas putida HB3267 14286631 YP_007227084.1 CDS B479_01115 NC_019905.1 240280 240594 R COG3288 NAD/NADP transhydrogenase alpha subunit; pyridine proton-translocating NAD(P) transhydrogenase complement(240280..240594) Pseudomonas putida HB3267 14286632 YP_007227085.1 CDS B479_01120 NC_019905.1 240606 241727 R COG3288 NAD/NADP transhydrogenase alpha subunit; NAD(P) transhydrogenase subunit alpha complement(240606..241727) Pseudomonas putida HB3267 14286633 YP_007227086.1 CDS B479_01125 NC_019905.1 242164 243063 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(242164..243063) Pseudomonas putida HB3267 14286634 YP_007227087.1 CDS B479_01130 NC_019905.1 243225 244406 D COG1960 Acyl-CoA dehydrogenases; glutaryl-CoA dehydrogenase 243225..244406 Pseudomonas putida HB3267 14286635 YP_007227088.1 CDS B479_01135 NC_019905.1 244421 245641 D COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F 244421..245641 Pseudomonas putida HB3267 14286636 YP_007227089.1 CDS B479_01140 NC_019905.1 257121 259496 R COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent siderophore receptor complement(257121..259496) Pseudomonas putida HB3267 14291776 YP_007227090.1 CDS B479_01145 NC_019905.1 259833 260789 R COG3712 Fe2+-dicitrate sensor, membrane component; anti-FecI sigma factor FecR complement(259833..260789) Pseudomonas putida HB3267 14286638 YP_007227091.1 CDS B479_01150 NC_019905.1 260794 261297 R COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; ECF subfamily RNA polymerase sigma-24 factor complement(260794..261297) Pseudomonas putida HB3267 14286639 YP_007227092.1 CDS B479_01155 NC_019905.1 261405 262094 R COG1802 Transcriptional regulators; GntR family transcriptional regulator complement(261405..262094) Pseudomonas putida HB3267 14286640 YP_007227093.1 CDS B479_01160 NC_019905.1 262300 263061 D COG3672 Predicted periplasmic protein; hypothetical protein 262300..263061 Pseudomonas putida HB3267 14286641 YP_007227094.1 CDS B479_01165 NC_019905.1 263072 265018 D COG2199 FOG: GGDEF domain; diguanylate cyclase/phosphodiesterase 263072..265018 Pseudomonas putida HB3267 14286642 YP_007227095.1 CDS B479_01170 NC_019905.1 265173 266549 R COG0845 Membrane-fusion protein; HlyD family type I secretion membrane fusion protein complement(265173..266549) Pseudomonas putida HB3267 14286643 YP_007227096.1 CDS B479_01175 NC_019905.1 266539 268695 R COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; type I secretion system ATPase complement(266539..268695) Pseudomonas putida HB3267 14286644 YP_007227097.1 CDS B479_01180 NC_019905.1 269682 295709 D COG2931 RTX toxins and related Ca2+-binding proteins; Surface adhesion protein, putative 269682..295709 Pseudomonas putida HB3267 14286645 YP_007227098.1 CDS B479_01185 NC_019905.1 296015 296356 D hypothetical protein 296015..296356 Pseudomonas putida HB3267 14286646 YP_007227099.1 CDS B479_01190 NC_019905.1 296556 297455 D COG2175 Probable taurine catabolism dioxygenase; taurine dioxygenase 296556..297455 Pseudomonas putida HB3267 14286647 YP_007227100.1 CDS B479_01195 NC_019905.1 297474 298493 D COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components; ABC transporter substrate-binding protein 297474..298493 Pseudomonas putida HB3267 14286648 YP_007227101.1 CDS B479_01200 NC_019905.1 298500 299363 D COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; ABC transporter ATP-binding protein 298500..299363 Pseudomonas putida HB3267 14286649 YP_007227102.1 CDS B479_01205 NC_019905.1 299378 300241 D COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; binding-protein-dependent transport system inner membrane protein 299378..300241 Pseudomonas putida HB3267 14286650 YP_007227103.1 CDS B479_01210 NC_019905.1 300466 300954 D COG3157 Hemolysin-coregulated protein (uncharacterized); Hcp1 family type VI secretion system effector 300466..300954 Pseudomonas putida HB3267 14286651 YP_007227104.1 CDS B479_01215 NC_019905.1 300964 301938 D hypothetical protein 300964..301938 Pseudomonas putida HB3267 14286652 YP_007227105.1 CDS B479_01220 NC_019905.1 301935 302306 D hypothetical protein 301935..302306 Pseudomonas putida HB3267 14286653 YP_007227106.1 CDS B479_01225 NC_019905.1 302563 302907 D hypothetical protein 302563..302907 Pseudomonas putida HB3267 14286654 YP_007227107.1 CDS B479_01230 NC_019905.1 303581 304144 R COG1438 Arginine repressor; transcriptional factor-like protein complement(303581..304144) Pseudomonas putida HB3267 14286655 YP_007227108.1 CDS B479_01235 NC_019905.1 304352 305146 D COG0790 FOG: TPR repeat, SEL1 subfamily; Sel1 domain-containing protein 304352..305146 Pseudomonas putida HB3267 14286656 YP_007227109.1 CDS B479_01240 NC_019905.1 305382 305834 D COG1846 Transcriptional regulators; MarR family transcriptional regulator 305382..305834 Pseudomonas putida HB3267 14286657 YP_007227110.1 CDS B479_01245 NC_019905.1 305831 307918 D COG1289 Predicted membrane protein; fusaric acid resistance protein region 305831..307918 Pseudomonas putida HB3267 14286658 YP_007227111.1 CDS B479_01250 NC_019905.1 307915 308127 D hypothetical protein 307915..308127 Pseudomonas putida HB3267 14286659 YP_007227112.1 CDS B479_01255 NC_019905.1 308124 308999 D COG1566 Multidrug resistance efflux pump; Secretion protein HlyD family protein 308124..308999 Pseudomonas putida HB3267 14286660 YP_007227113.1 CDS B479_01260 NC_019905.1 308996 310414 D COG1538 Outer membrane protein; RND efflux system outer membrane lipoprotein 308996..310414 Pseudomonas putida HB3267 14286661 YP_007227114.1 CDS B479_01265 NC_019905.1 310894 311169 D hypothetical protein 310894..311169 Pseudomonas putida HB3267 14286662 YP_007227115.1 CDS B479_01270 NC_019905.1 311166 311417 D hypothetical protein 311166..311417 Pseudomonas putida HB3267 14286663 YP_007227116.1 CDS B479_01275 NC_019905.1 311622 312077 R COG1943 Transposase and inactivated derivatives; hypothetical protein complement(311622..312077) Pseudomonas putida HB3267 14286664 YP_007227117.1 CDS B479_01280 NC_019905.1 312430 314340 D COG2010 Cytochrome c, mono- and diheme variants; cytochrome c family protein 312430..314340 Pseudomonas putida HB3267 14286665 YP_007227118.1 CDS B479_01285 NC_019905.1 314474 314719 R hypothetical protein complement(314474..314719) Pseudomonas putida HB3267 14286666 YP_007227119.1 CDS B479_01290 NC_019905.1 314790 315092 R hypothetical protein complement(314790..315092) Pseudomonas putida HB3267 14286667 YP_007227120.1 CDS B479_01295 NC_019905.1 315240 315902 D COG0625 Glutathione S-transferase; glutathione S-transferase domain-containing protein 315240..315902 Pseudomonas putida HB3267 14286668 YP_007227121.1 CDS B479_01300 NC_019905.1 316035 317429 R COG0165 Argininosuccinate lyase; argininosuccinate lyase complement(316035..317429) Pseudomonas putida HB3267 14286669 YP_007227122.1 CDS B479_01305 NC_019905.1 317728 318471 D COG3279 Response regulator of the LytR/AlgR family; LytTR family two component transcriptional regulator 317728..318471 Pseudomonas putida HB3267 14286670 YP_007227123.1 CDS hemC NC_019905.1 318664 319605 D COG0181 Porphobilinogen deaminase; porphobilinogen deaminase 318664..319605 Pseudomonas putida HB3267 14286671 YP_007227124.1 CDS B479_01315 NC_019905.1 319602 320369 D COG1587 Uroporphyrinogen-III synthase; uroporphyrinogen-III synthase 319602..320369 Pseudomonas putida HB3267 14286672 YP_007227125.1 CDS B479_01320 NC_019905.1 320415 321515 D COG2959 Uncharacterized enzyme of heme biosynthesis; uroporphyrin-III C-methyltransferase 320415..321515 Pseudomonas putida HB3267 14286673 YP_007227126.1 CDS B479_01325 NC_019905.1 321512 322750 D COG3071 Uncharacterized enzyme of heme biosynthesis; HemY domain-containing protein 321512..322750 Pseudomonas putida HB3267 14286674 YP_007227127.1 CDS B479_01330 NC_019905.1 322972 323478 D COG1495 Disulfide bond formation protein DsbB; disulfide bond formation protein DsbB 322972..323478 Pseudomonas putida HB3267 14286675 YP_007227128.1 CDS B479_01335 NC_019905.1 323709 324179 D COG3160 Regulator of sigma D; anti-RNA polymerase sigma 70 factor 323709..324179 Pseudomonas putida HB3267 14286676 YP_007227129.1 CDS B479_01340 NC_019905.1 324189 324827 R COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; FKBP-type peptidylprolyl isomerase complement(324189..324827) Pseudomonas putida HB3267 14286677 YP_007227130.1 CDS B479_01345 NC_019905.1 325208 326326 D alginate regulatory protein AlgP 325208..326326 Pseudomonas putida HB3267 14286678 YP_007227131.1 CDS B479_01350 NC_019905.1 326302 326784 R hypothetical protein complement(326302..326784) Pseudomonas putida HB3267 14286679 YP_007227132.1 CDS B479_01355 NC_019905.1 326835 328745 D COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein 326835..328745 Pseudomonas putida HB3267 14286680 YP_007227133.1 CDS B479_01360 NC_019905.1 328745 329332 D COG0668 Small-conductance mechanosensitive channel; hypothetical protein 328745..329332 Pseudomonas putida HB3267 14286681 YP_007227134.1 CDS B479_01365 NC_019905.1 329536 330168 D COG1280 Putative threonine efflux protein; lysine exporter protein LysE/YggA 329536..330168 Pseudomonas putida HB3267 14286682 YP_007227135.1 CDS B479_01370 NC_019905.1 330217 330969 R COG0330 Membrane protease subunits, stomatin/prohibitin homologs; hypothetical protein complement(330217..330969) Pseudomonas putida HB3267 14286683 YP_007227136.1 CDS B479_01375 NC_019905.1 330972 332318 R COG1030 Membrane-bound serine protease (ClpP class); membrane-bound protease complement(330972..332318) Pseudomonas putida HB3267 14286684 YP_007227137.1 CDS B479_01380 NC_019905.1 332417 332875 D COG2606 Uncharacterized conserved protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 332417..332875 Pseudomonas putida HB3267 14286685 YP_007227138.1 CDS B479_01385 NC_019905.1 332937 333179 D hypothetical protein 332937..333179 Pseudomonas putida HB3267 14286686 YP_007227139.1 CDS B479_01390 NC_019905.1 333249 333887 D hypothetical protein 333249..333887 Pseudomonas putida HB3267 14286687 YP_007227140.1 CDS B479_01395 NC_019905.1 333894 334331 R COG0517 FOG: CBS domain; hypothetical protein complement(333894..334331) Pseudomonas putida HB3267 14286688 YP_007227141.1 CDS B479_01400 NC_019905.1 334562 336292 R COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; hypothetical protein complement(334562..336292) Pseudomonas putida HB3267 14286689 YP_007227142.1 CDS B479_01405 NC_019905.1 336467 336790 R hypothetical protein complement(336467..336790) Pseudomonas putida HB3267 14286690 YP_007227143.1 CDS B479_01410 NC_019905.1 336848 337378 R hypothetical protein complement(336848..337378) Pseudomonas putida HB3267 14286691 YP_007227144.1 CDS B479_01415 NC_019905.1 337390 337893 R outer membrane lipoprotein complement(337390..337893) Pseudomonas putida HB3267 14286692 YP_007227145.1 CDS B479_01420 NC_019905.1 338395 339144 D COG2188 Transcriptional regulators; GntR family transcriptional regulator 338395..339144 Pseudomonas putida HB3267 14291704 YP_007227146.1 CDS B479_01425 NC_019905.1 339141 340865 D COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; oxidoreductase 339141..340865 Pseudomonas putida HB3267 14286694 YP_007227147.1 CDS B479_01430 NC_019905.1 340929 341174 D COG1146 Ferredoxin; 4Fe-4S ferredoxin 340929..341174 Pseudomonas putida HB3267 14286695 YP_007227148.1 CDS B479_01435 NC_019905.1 341293 342699 D COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components; putative nitrate ABC transporter periplasmic nitrate-binding protein 341293..342699 Pseudomonas putida HB3267 14286696 YP_007227149.1 CDS B479_01440 NC_019905.1 342715 343497 D COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; nitrate ABC transporter permease 342715..343497 Pseudomonas putida HB3267 14286697 YP_007227150.1 CDS B479_01445 NC_019905.1 343497 344348 D COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; nitrate ABC transporter ATP-binding protein 343497..344348 Pseudomonas putida HB3267 14286698 YP_007227151.1 CDS B479_01450 NC_019905.1 344345 345310 D COG1413 FOG: HEAT repeat; putative phycobiliprotein 344345..345310 Pseudomonas putida HB3267 14286699 YP_007227152.1 CDS B479_01455 NC_019905.1 345310 345591 D COG3536 Uncharacterized protein conserved in bacteria; hypothetical protein 345310..345591 Pseudomonas putida HB3267 14286700 YP_007227153.1 CDS B479_01460 NC_019905.1 345781 346644 R COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; ABC transporter-like protein complement(345781..346644) Pseudomonas putida HB3267 14286701 YP_007227154.1 CDS B479_01465 NC_019905.1 346641 348080 R COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; binding-protein-dependent transport system inner membrane protein complement(346641..348080) Pseudomonas putida HB3267 14286702 YP_007227155.1 CDS B479_01470 NC_019905.1 348528 349565 D COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components; NMT1/THI5-like domain-containing protein 348528..349565 Pseudomonas putida HB3267 14286703 YP_007227156.1 CDS B479_01475 NC_019905.1 349603 350508 D COG2175 Probable taurine catabolism dioxygenase; taurine dioxygenase 349603..350508 Pseudomonas putida HB3267 14286704 YP_007227157.1 CDS B479_01480 NC_019905.1 350638 351552 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(350638..351552) Pseudomonas putida HB3267 14286705 YP_007227158.1 CDS B479_01485 NC_019905.1 351745 354081 D COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent receptor 351745..354081 Pseudomonas putida HB3267 14286706 YP_007227159.1 CDS B479_01490 NC_019905.1 354099 355775 D arylsulfotransferase 354099..355775 Pseudomonas putida HB3267 14286707 YP_007227160.1 CDS gabD NC_019905.1 356114 357556 D COG1012 NAD-dependent aldehyde dehydrogenases; succinate-semialdehyde dehydrogenase I 356114..357556 Pseudomonas putida HB3267 14286708 YP_007227161.1 CDS B479_01500 NC_019905.1 357740 359017 D COG0160 4-aminobutyrate aminotransferase and related aminotransferases; 4-aminobutyrate aminotransferase 357740..359017 Pseudomonas putida HB3267 14286709 YP_007227162.1 CDS B479_01505 NC_019905.1 359153 360415 D COG0784 FOG: CheY-like receiver; Putative signal transduction protein 359153..360415 Pseudomonas putida HB3267 14286710 YP_007227163.1 CDS B479_01510 NC_019905.1 360531 361559 R COG2202 FOG: PAS/PAC domain; Diguanylate cyclase with PAS/PAC sensor complement(360531..361559) Pseudomonas putida HB3267 14286711 YP_007227164.1 CDS B479_01515 NC_019905.1 361660 362844 R COG1398 Fatty-acid desaturase; fatty acid desaturase complement(361660..362844) Pseudomonas putida HB3267 14286712 YP_007227165.1 CDS B479_01520 NC_019905.1 363021 364886 D COG2199 FOG: GGDEF domain; GAF and PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 363021..364886 Pseudomonas putida HB3267 14286713 YP_007227166.1 CDS B479_01525 NC_019905.1 364980 365624 R COG2011 ABC-type metal ion transport system, permease component; binding-protein-dependent transport system inner membrane protein complement(364980..365624) Pseudomonas putida HB3267 14286714 YP_007227167.1 CDS B479_01530 NC_019905.1 365614 366723 R COG1135 ABC-type metal ion transport system, ATPase component; ABC transporter ATP-binding protein complement(365614..366723) Pseudomonas putida HB3267 14286715 YP_007227168.1 CDS B479_01535 NC_019905.1 366725 367525 R COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; NLPA lipoprotein complement(366725..367525) Pseudomonas putida HB3267 14286716 YP_007227169.1 CDS B479_01540 NC_019905.1 367518 368909 R COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; DszA family monooxygenase complement(367518..368909) Pseudomonas putida HB3267 14286717 YP_007227170.1 CDS B479_01545 NC_019905.1 368909 370090 R COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase type 2 complement(368909..370090) Pseudomonas putida HB3267 14286718 YP_007227171.1 CDS B479_01550 NC_019905.1 370225 371466 R COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase type 2 complement(370225..371466) Pseudomonas putida HB3267 14286719 YP_007227172.1 CDS B479_01555 NC_019905.1 371793 372551 R COG1126 ABC-type polar amino acid transport system, ATPase component; amino-acid ABC transporter ATP-binding protein YecC complement(371793..372551) Pseudomonas putida HB3267 14286720 YP_007227173.1 CDS B479_01560 NC_019905.1 372554 373222 R COG0765 ABC-type amino acid transport system, permease component; amino acid ABC transporter permease complement(372554..373222) Pseudomonas putida HB3267 14286721 YP_007227174.1 CDS B479_01565 NC_019905.1 373219 374013 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; cystine transporter subunit complement(373219..374013) Pseudomonas putida HB3267 14286722 YP_007227175.1 CDS B479_01570 NC_019905.1 374406 375338 D COG1045 Serine acetyltransferase; serine O-acetyltransferase 374406..375338 Pseudomonas putida HB3267 14286723 YP_007227176.1 CDS B479_01575 NC_019905.1 375630 377633 D COG1292 Choline-glycine betaine transporter; choline/carnitine/betaine transporter 375630..377633 Pseudomonas putida HB3267 14286724 YP_007227177.1 CDS tauD NC_019905.1 377748 378581 R COG2175 Probable taurine catabolism dioxygenase; taurine dioxygenase complement(377748..378581) Pseudomonas putida HB3267 14286725 YP_007227178.1 CDS tauB NC_019905.1 379466 380248 R COG4525 ABC-type taurine transport system, ATPase component; taurine transporter ATP-binding subunit complement(379466..380248) Pseudomonas putida HB3267 14286726 YP_007227179.1 CDS B479_01600 NC_019905.1 380283 381254 R COG4521 ABC-type taurine transport system, periplasmic component; taurine ABC transporter periplasmic binding protein complement(380283..381254) Pseudomonas putida HB3267 14286727 YP_007227180.1 CDS B479_01605 NC_019905.1 381763 383097 D outer membrane porin 381763..383097 Pseudomonas putida HB3267 14286728 YP_007227181.1 CDS B479_01610 NC_019905.1 383263 383901 D COG0450 Peroxiredoxin; peroxidase 383263..383901 Pseudomonas putida HB3267 14286729 YP_007227182.1 CDS B479_01615 NC_019905.1 384129 384722 D COG0431 Predicted flavoprotein; NAD(P)H-dependent FMN reductase 384129..384722 Pseudomonas putida HB3267 14286730 YP_007227183.1 CDS B479_01620 NC_019905.1 384807 385772 D COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components; aliphatic sulfonates ABC transporter substrate-binding protein 384807..385772 Pseudomonas putida HB3267 14286731 YP_007227184.1 CDS B479_01625 NC_019905.1 385831 386979 D COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; alkanesulfonate monooxygenase 385831..386979 Pseudomonas putida HB3267 14286732 YP_007227185.1 CDS B479_01630 NC_019905.1 386990 387787 D COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; binding-protein-dependent transport system inner membrane protein 386990..387787 Pseudomonas putida HB3267 14286733 YP_007227186.1 CDS ssuB NC_019905.1 387784 388596 D COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; aliphatic sulfonates transport ATP-binding subunit 387784..388596 Pseudomonas putida HB3267 14286734 YP_007227187.1 CDS B479_01640 NC_019905.1 388641 388856 D COG3585 Molybdopterin-binding protein; TOBE domain-containing protein 388641..388856 Pseudomonas putida HB3267 14286735 YP_007227188.1 CDS B479_01645 NC_019905.1 388984 389610 R COG1309 Transcriptional regulator; TetR family transcriptional regulator complement(388984..389610) Pseudomonas putida HB3267 14286736 YP_007227189.1 CDS B479_01650 NC_019905.1 389610 391187 R COG2918 Gamma-glutamylcysteine synthetase; glutamate--cysteine ligase complement(389610..391187) Pseudomonas putida HB3267 14286737 YP_007227190.1 CDS B479_01655 NC_019905.1 391341 391724 R COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; thioesterase superfamily protein complement(391341..391724) Pseudomonas putida HB3267 14286738 YP_007227191.1 CDS B479_01660 NC_019905.1 391724 394048 R COG2183 Transcriptional accessory protein; RNA-binding S1 domain-containing protein complement(391724..394048) Pseudomonas putida HB3267 14286739 YP_007227192.1 CDS ompR NC_019905.1 394266 395006 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; osmolarity response regulator 394266..395006 Pseudomonas putida HB3267 14286740 YP_007227193.1 CDS B479_01670 NC_019905.1 395020 396333 D COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 395020..396333 Pseudomonas putida HB3267 14286741 YP_007227194.1 CDS B479_01675 NC_019905.1 396448 397353 R COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); ribosomal protein S6 modification protein complement(396448..397353) Pseudomonas putida HB3267 14286742 YP_007227195.1 CDS B479_01680 NC_019905.1 397350 397832 R COG4067 Uncharacterized protein conserved in archaea; hypothetical protein complement(397350..397832) Pseudomonas putida HB3267 14286743 YP_007227196.1 CDS B479_01685 NC_019905.1 397942 398343 D COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); RNA-binding S4 domain-containing protein 397942..398343 Pseudomonas putida HB3267 14286744 YP_007227197.1 CDS B479_01690 NC_019905.1 398538 399332 R COG0671 Membrane-associated phospholipid phosphatase; phosphoesterase PA-phosphatase-like protein complement(398538..399332) Pseudomonas putida HB3267 14286745 YP_007227198.1 CDS hslO NC_019905.1 399455 400354 D COG1281 Disulfide bond chaperones of the HSP33 family; Hsp33-like chaperonin 399455..400354 Pseudomonas putida HB3267 14286746 YP_007227199.1 CDS B479_01700 NC_019905.1 400534 402075 D COG1866 Phosphoenolpyruvate carboxykinase (ATP); phosphoenolpyruvate carboxykinase 400534..402075 Pseudomonas putida HB3267 14286747 YP_007227200.1 CDS B479_01705 NC_019905.1 402252 402692 D COG0824 Predicted thioesterase; thioesterase superfamily protein 402252..402692 Pseudomonas putida HB3267 14286748 YP_007227201.1 CDS B479_01710 NC_019905.1 402748 403230 R 17 kDa surface antigen complement(402748..403230) Pseudomonas putida HB3267 14286749 YP_007227202.1 CDS B479_01715 NC_019905.1 403548 405893 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; oxidoreductase alpha (molybdopterin) subunit complement(403548..405893) Pseudomonas putida HB3267 14286750 YP_007227203.1 CDS B479_01720 NC_019905.1 405899 406729 R COG1526 Uncharacterized protein required for formate dehydrogenase activity; formate dehydrogenase family accessory protein FdhD complement(405899..406729) Pseudomonas putida HB3267 14286751 YP_007227204.1 CDS B479_01725 NC_019905.1 406915 407355 D COG1652 Uncharacterized protein containing LysM domain; LysM domain/BON superfamily protein 406915..407355 Pseudomonas putida HB3267 14286752 YP_007227205.1 CDS B479_01730 NC_019905.1 407468 408130 R COG1011 Predicted hydrolase (HAD superfamily); HAD family hydrolase complement(407468..408130) Pseudomonas putida HB3267 14286753 YP_007227206.1 CDS nudE NC_019905.1 408195 408761 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; adenosine nucleotide hydrolase NudE 408195..408761 Pseudomonas putida HB3267 14286754 YP_007227207.1 CDS B479_01740 NC_019905.1 408758 409576 D COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; 3'(2'),5'-bisphosphate nucleotidase 408758..409576 Pseudomonas putida HB3267 14286755 YP_007227208.1 CDS B479_01745 NC_019905.1 409790 410245 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; thioesterase domain-containing protein complement(409790..410245) Pseudomonas putida HB3267 14286756 YP_007227209.1 CDS B479_01750 NC_019905.1 410245 411651 R COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; two component sigma54 specific Fis family transcriptional regulator complement(410245..411651) Pseudomonas putida HB3267 14286757 YP_007227210.1 CDS B479_01755 NC_019905.1 411648 413462 R COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; histidine kinase complement(411648..413462) Pseudomonas putida HB3267 14286758 YP_007227211.1 CDS B479_01760 NC_019905.1 413505 414050 R COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes; dTDP-4-dehydrorhamnose 3,5-epimerase complement(413505..414050) Pseudomonas putida HB3267 14286759 YP_007227212.1 CDS B479_01765 NC_019905.1 414330 415436 D COG2957 Peptidylarginine deiminase and related enzymes; agmatine deiminase 414330..415436 Pseudomonas putida HB3267 14286760 YP_007227213.1 CDS B479_01770 NC_019905.1 415952 418030 R COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent siderophore receptor complement(415952..418030) Pseudomonas putida HB3267 14286761 YP_007227214.1 CDS B479_01775 NC_019905.1 418533 419852 D outer membrane porin 418533..419852 Pseudomonas putida HB3267 14286762 YP_007227215.1 CDS B479_01780 NC_019905.1 419970 421637 R COG0069 Glutamate synthase domain 2; glutamate synthase complement(419970..421637) Pseudomonas putida HB3267 14286763 YP_007227216.1 CDS B479_01785 NC_019905.1 421878 423254 R COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(421878..423254) Pseudomonas putida HB3267 14286764 YP_007227217.1 CDS B479_01790 NC_019905.1 423247 423966 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component transcriptional regulator complement(423247..423966) Pseudomonas putida HB3267 14286765 YP_007227218.1 CDS B479_01795 NC_019905.1 424107 426404 D COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; TonB-dependent siderophore receptor 424107..426404 Pseudomonas putida HB3267 14286766 YP_007227219.1 CDS B479_01800 NC_019905.1 426686 426892 R hypothetical protein complement(426686..426892) Pseudomonas putida HB3267 14286767 YP_007227220.1 CDS B479_01805 NC_019905.1 427219 427467 R hypothetical protein complement(427219..427467) Pseudomonas putida HB3267 14291705 YP_007227221.1 CDS B479_01810 NC_019905.1 428032 428307 D hypothetical protein 428032..428307 Pseudomonas putida HB3267 14286769 YP_007227222.1 CDS B479_01815 NC_019905.1 428659 429864 R hypothetical protein complement(428659..429864) Pseudomonas putida HB3267 14286770 YP_007227223.1 CDS B479_01820 NC_019905.1 429993 430682 R COG4160 ABC-type arginine/histidine transport system, permease component; polar amino acid ABC transporter inner membrane subunit complement(429993..430682) Pseudomonas putida HB3267 14286771 YP_007227224.1 CDS B479_01825 NC_019905.1 430682 431374 R COG4215 ABC-type arginine transport system, permease component; polar amino acid ABC transporter inner membrane subunit complement(430682..431374) Pseudomonas putida HB3267 14286772 YP_007227225.1 CDS B479_01830 NC_019905.1 431429 432184 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter periplasmic amino acid-binding protein complement(431429..432184) Pseudomonas putida HB3267 14286773 YP_007227226.1 CDS B479_01835 NC_019905.1 432196 432969 R COG4598 ABC-type histidine transport system, ATPase component; amino acid ABC transporter ATP-binding protein complement(432196..432969) Pseudomonas putida HB3267 14286774 YP_007227227.1 CDS B479_01840 NC_019905.1 433634 435019 D COG1113 Gamma-aminobutyrate permease and related permeases; GABA permease 433634..435019 Pseudomonas putida HB3267 14286775 YP_007227228.1 CDS B479_01845 NC_019905.1 435199 435642 R hypothetical protein complement(435199..435642) Pseudomonas putida HB3267 14286776 YP_007227229.1 CDS B479_01850 NC_019905.1 435700 436680 R COG2326 Uncharacterized conserved protein; hypothetical protein complement(435700..436680) Pseudomonas putida HB3267 14286777 YP_007227230.1 CDS B479_01855 NC_019905.1 436924 437226 D COG3636 Predicted transcriptional regulator; transcriptional regulator protein 436924..437226 Pseudomonas putida HB3267 14286778 YP_007227231.1 CDS B479_01860 NC_019905.1 437531 437803 R COG2924 Fe-S cluster protector protein; oxidative damage protection protein complement(437531..437803) Pseudomonas putida HB3267 14291706 YP_007227232.1 CDS B479_01865 NC_019905.1 437800 438867 R COG1194 A/G-specific DNA glycosylase; A/G-specific adenine glycosylase complement(437800..438867) Pseudomonas putida HB3267 14286780 YP_007227233.1 CDS B479_01870 NC_019905.1 438864 441110 R COG2982 Uncharacterized protein involved in outer membrane biogenesis; AsmA family protein complement(438864..441110) Pseudomonas putida HB3267 14286781 YP_007227234.1 CDS B479_01875 NC_019905.1 441416 443077 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 441416..443077 Pseudomonas putida HB3267 14286782 YP_007227235.1 CDS hisB NC_019905.1 443361 443954 D COG0131 Imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 443361..443954 Pseudomonas putida HB3267 14286783 YP_007227236.1 CDS hisH NC_019905.1 443955 444593 D COG0118 Glutamine amidotransferase; imidazole glycerol phosphate synthase subunit HisH 443955..444593 Pseudomonas putida HB3267 14286784 YP_007227237.1 CDS B479_01890 NC_019905.1 444594 444854 D COG5460 Uncharacterized conserved protein; hypothetical protein 444594..444854 Pseudomonas putida HB3267 14286785 YP_007227238.1 CDS B479_01895 NC_019905.1 444882 445619 D COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 444882..445619 Pseudomonas putida HB3267 14286786 YP_007227239.1 CDS B479_01900 NC_019905.1 445630 446400 D COG0107 Imidazoleglycerol-phosphate synthase; imidazole glycerol phosphate synthase subunit HisF 445630..446400 Pseudomonas putida HB3267 14286787 YP_007227240.1 CDS B479_01905 NC_019905.1 446521 447699 R COG4175 ABC-type proline/glycine betaine transport system, ATPase component; choline ABC transporter ATP-binding protein complement(446521..447699) Pseudomonas putida HB3267 14286788 YP_007227241.1 CDS B479_01910 NC_019905.1 447696 448541 R COG4176 ABC-type proline/glycine betaine transport system, permease component; choline ABC transporter permease complement(447696..448541) Pseudomonas putida HB3267 14286789 YP_007227242.1 CDS B479_01915 NC_019905.1 448626 449573 R COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components; glycine betaine/L-proline ABC transporter periplasmic binding protein complement(448626..449573) Pseudomonas putida HB3267 14286790 YP_007227243.1 CDS B479_01920 NC_019905.1 450027 451403 D COG1760 L-serine deaminase; L-serine dehydratase 1 450027..451403 Pseudomonas putida HB3267 14286791 YP_007227244.1 CDS B479_01925 NC_019905.1 451861 452967 D COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; AraC family transcriptional regulator 451861..452967 Pseudomonas putida HB3267 14286792 YP_007227245.1 CDS B479_01930 NC_019905.1 453088 453345 R hypothetical protein complement(453088..453345) Pseudomonas putida HB3267 14286793 YP_007227246.1 CDS B479_01935 NC_019905.1 453713 454189 R COG0824 Predicted thioesterase; hypothetical protein complement(453713..454189) Pseudomonas putida HB3267 14286794 YP_007227247.1 CDS B479_01940 NC_019905.1 454200 455165 R COG1250 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase complement(454200..455165) Pseudomonas putida HB3267 14286795 YP_007227248.1 CDS B479_01945 NC_019905.1 455184 456068 R COG3246 Uncharacterized conserved protein; hypothetical protein complement(455184..456068) Pseudomonas putida HB3267 14286796 YP_007227249.1 CDS B479_01950 NC_019905.1 456195 457139 R COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components; choline ABC transporter periplasmic binding protein complement(456195..457139) Pseudomonas putida HB3267 14286797 YP_007227250.1 CDS B479_01955 NC_019905.1 457287 458231 D COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; AraC family transcriptional regulator 457287..458231 Pseudomonas putida HB3267 14286798 YP_007227251.1 CDS B479_01960 NC_019905.1 458353 458604 R COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; colicin immunity protein/pyocin immunity protein complement(458353..458604) Pseudomonas putida HB3267 14286799 YP_007227252.1 CDS B479_01965 NC_019905.1 458607 459884 R S-type Pyocin complement(458607..459884) Pseudomonas putida HB3267 14286800 YP_007227253.1 CDS B479_01970 NC_019905.1 460813 460932 R hypothetical protein complement(460813..460932) Pseudomonas putida HB3267 14286801 YP_007227254.1 CDS B479_01975 NC_019905.1 461277 461828 R hypothetical protein complement(461277..461828) Pseudomonas putida HB3267 14286802 YP_007227255.1 CDS B479_01980 NC_019905.1 461895 462635 R COG0442 Prolyl-tRNA synthetase; hypothetical protein complement(461895..462635) Pseudomonas putida HB3267 14286803 YP_007227256.1 CDS B479_01985 NC_019905.1 462727 463119 R COG3755 Uncharacterized protein conserved in bacteria; hypothetical protein complement(462727..463119) Pseudomonas putida HB3267 14286804 YP_007227257.1 CDS B479_01990 NC_019905.1 463416 464393 D COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog; membrane dipeptidase 463416..464393 Pseudomonas putida HB3267 14286805 YP_007227258.1 CDS B479_01995 NC_019905.1 464471 465001 D hypothetical protein 464471..465001 Pseudomonas putida HB3267 14286806 YP_007227259.1 CDS B479_02000 NC_019905.1 465017 467077 D COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; NADH:flavin oxidoreductase 465017..467077 Pseudomonas putida HB3267 14286807 YP_007227260.1 CDS B479_02005 NC_019905.1 467255 469207 D COG0247 Fe-S oxidoreductase; iron-sulfur cluster-binding protein 467255..469207 Pseudomonas putida HB3267 14286808 YP_007227261.1 CDS B479_02010 NC_019905.1 469207 470439 D COG2025 Electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 469207..470439 Pseudomonas putida HB3267 14286809 YP_007227262.1 CDS B479_02015 NC_019905.1 470450 471220 D COG2086 Electron transfer flavoprotein, beta subunit; electron transfer flavoprotein subunit alpha/beta-like protein 470450..471220 Pseudomonas putida HB3267 14286810 YP_007227263.1 CDS B479_02020 NC_019905.1 471899 472657 D COG3209 Rhs family protein; hypothetical protein 471899..472657 Pseudomonas putida HB3267 14286811 YP_007227264.1 CDS B479_02025 NC_019905.1 472691 473983 R COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit; Rieske family iron-sulfur cluster-binding protein complement(472691..473983) Pseudomonas putida HB3267 14286812 YP_007227265.1 CDS B479_02030 NC_019905.1 474278 475378 D COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; oxidoreductase FAD-binding domain-containing protein 474278..475378 Pseudomonas putida HB3267 14286813 YP_007227266.1 CDS B479_02035 NC_019905.1 475539 476204 D COG3209 Rhs family protein; hypothetical protein 475539..476204 Pseudomonas putida HB3267 14286814 YP_007227267.1 CDS B479_02040 NC_019905.1 476547 476777 D hypothetical protein 476547..476777 Pseudomonas putida HB3267 14286815 YP_007227268.1 CDS B479_02045 NC_019905.1 476774 477076 D COG3027 Uncharacterized protein conserved in bacteria; hypothetical protein 476774..477076 Pseudomonas putida HB3267 14286816 YP_007227269.1 CDS B479_02050 NC_019905.1 477254 479191 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 477254..479191 Pseudomonas putida HB3267 14286817 YP_007227270.1 CDS B479_02055 NC_019905.1 479428 480468 R COG2008 Threonine aldolase; threonine aldolase complement(479428..480468) Pseudomonas putida HB3267 14286818 YP_007227271.1 CDS B479_02060 NC_019905.1 480807 482060 D COG0112 Glycine/serine hydroxymethyltransferase; serine hydroxymethyltransferase 480807..482060 Pseudomonas putida HB3267 14286819 YP_007227272.1 CDS B479_02065 NC_019905.1 482076 483326 D COG0665 Glycine/D-amino acid oxidases (deaminating); sarcosine oxidase subunit beta 482076..483326 Pseudomonas putida HB3267 14286820 YP_007227273.1 CDS B479_02070 NC_019905.1 483341 483676 D COG4311 Sarcosine oxidase delta subunit; sarcosine oxidase subunit delta 483341..483676 Pseudomonas putida HB3267 14286821 YP_007227274.1 CDS B479_02075 NC_019905.1 483673 486690 D COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; sarcosine oxidase subunit alpha 483673..486690 Pseudomonas putida HB3267 14286822 YP_007227275.1 CDS B479_02080 NC_019905.1 486870 487502 D COG4583 Sarcosine oxidase gamma subunit; sarcosine oxidase subunit gamma 486870..487502 Pseudomonas putida HB3267 14286823 YP_007227276.1 CDS B479_02085 NC_019905.1 487515 488372 D COG0788 Formyltetrahydrofolate hydrolase; formyltetrahydrofolate deformylase 487515..488372 Pseudomonas putida HB3267 14286824 YP_007227277.1 CDS B479_02090 NC_019905.1 488379 488711 R hypothetical protein complement(488379..488711) Pseudomonas putida HB3267 14286825 YP_007227278.1 CDS B479_02095 NC_019905.1 488983 490182 D COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; formaldehyde dehydrogenase 488983..490182 Pseudomonas putida HB3267 14286826 YP_007227279.1 CDS B479_02100 NC_019905.1 490413 490526 R hypothetical protein complement(490413..490526) Pseudomonas putida HB3267 14286827 YP_007227280.1 CDS B479_02105 NC_019905.1 492036 492941 D COG3209 Rhs family protein; hypothetical protein 492036..492941 Pseudomonas putida HB3267 14286828 YP_007227281.1 CDS B479_02110 NC_019905.1 493111 493278 R COG1004 Predicted UDP-glucose 6-dehydrogenase; hypothetical protein complement(493111..493278) Pseudomonas putida HB3267 14286829 YP_007227282.1 CDS B479_02115 NC_019905.1 493736 494656 R COG3209 Rhs family protein; hypothetical protein complement(493736..494656) Pseudomonas putida HB3267 14286830 YP_007227283.1 CDS B479_02120 NC_019905.1 494913 495494 D hypothetical protein 494913..495494 Pseudomonas putida HB3267 14286831 YP_007227284.1 CDS B479_02125 NC_019905.1 495709 497058 R COG0531 Amino acid transporters; amino acid permease-associated protein complement(495709..497058) Pseudomonas putida HB3267 14286832 YP_007227285.1 CDS B479_02130 NC_019905.1 497304 498191 R COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; acyltransferase complement(497304..498191) Pseudomonas putida HB3267 14286833 YP_007227286.1 CDS B479_02135 NC_019905.1 498374 498874 D COG4067 Uncharacterized protein conserved in archaea; hypothetical protein 498374..498874 Pseudomonas putida HB3267 14286834 YP_007227287.1 CDS B479_02140 NC_019905.1 499115 499795 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding response regulator CreB 499115..499795 Pseudomonas putida HB3267 14286835 YP_007227288.1 CDS B479_02145 NC_019905.1 499795 501231 D COG0642 Signal transduction histidine kinase; sensory histidine kinase CreC 499795..501231 Pseudomonas putida HB3267 14286836 YP_007227289.1 CDS B479_02150 NC_019905.1 501422 502750 D COG4452 Inner membrane protein involved in colicin E2 resistance; hypothetical protein 501422..502750 Pseudomonas putida HB3267 14286837 YP_007227290.1 CDS B479_02155 NC_019905.1 502900 503523 R COG0625 Glutathione S-transferase; glutathione S-transferase complement(502900..503523) Pseudomonas putida HB3267 14286838 YP_007227291.1 CDS B479_02160 NC_019905.1 503527 504195 R COG0225 Peptide methionine sulfoxide reductase; methionine sulfoxide reductase A complement(503527..504195) Pseudomonas putida HB3267 14286839 YP_007227292.1 CDS B479_02165 NC_019905.1 504364 507054 R COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; GAF and PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(504364..507054) Pseudomonas putida HB3267 14286840 YP_007227293.1 CDS B479_02170 NC_019905.1 507337 508977 R COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; dihydrolipoamide acetyltransferase complement(507337..508977) Pseudomonas putida HB3267 14286841 YP_007227294.1 CDS aceE NC_019905.1 508991 511636 R COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component; pyruvate dehydrogenase subunit E1 complement(508991..511636) Pseudomonas putida HB3267 14286842 YP_007227295.1 CDS B479_02180 NC_019905.1 512020 514953 D COG1391 Glutamine synthetase adenylyltransferase; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 512020..514953 Pseudomonas putida HB3267 14286843 YP_007227296.1 CDS B479_02185 NC_019905.1 515178 516227 D COG0859 ADP-heptose:LPS heptosyltransferase; lipopolysaccharide heptosyltransferase II 515178..516227 Pseudomonas putida HB3267 14286844 YP_007227297.1 CDS B479_02190 NC_019905.1 516228 517286 D COG0859 ADP-heptose:LPS heptosyltransferase; lipopolysaccharide heptosyltransferase I 516228..517286 Pseudomonas putida HB3267 14286845 YP_007227298.1 CDS B479_02195 NC_019905.1 517286 518410 D COG0438 Glycosyltransferase; lipopolysaccharide core biosynthesis protein WaaG 517286..518410 Pseudomonas putida HB3267 14286846 YP_007227299.1 CDS B479_02200 NC_019905.1 518407 519213 D COG0515 Serine/threonine protein kinase; lipopolysaccharide core heptose(I) kinase RfaP 518407..519213 Pseudomonas putida HB3267 14286847 YP_007227300.1 CDS B479_02205 NC_019905.1 519213 519947 D COG0515 Serine/threonine protein kinase; lipopolysaccharide kinase 519213..519947 Pseudomonas putida HB3267 14286848 YP_007227301.1 CDS B479_02210 NC_019905.1 519944 520696 D COG0515 Serine/threonine protein kinase; lipopolysaccharide kinase 519944..520696 Pseudomonas putida HB3267 14286849 YP_007227302.1 CDS B479_02215 NC_019905.1 520696 522138 D COG0515 Serine/threonine protein kinase; hypothetical protein 520696..522138 Pseudomonas putida HB3267 14286850 YP_007227303.1 CDS B479_02220 NC_019905.1 524985 525170 R hypothetical protein complement(524985..525170) Pseudomonas putida HB3267 14286851 YP_007227304.1 CDS B479_02225 NC_019905.1 525167 526279 R COG3182 Uncharacterized iron-regulated membrane protein; PepSY-associated TM helix domain-containing protein complement(525167..526279) Pseudomonas putida HB3267 14286852 YP_007227305.1 CDS B479_02230 NC_019905.1 526409 528844 R COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent siderophore receptor complement(526409..528844) Pseudomonas putida HB3267 14286853 YP_007227306.1 CDS B479_02235 NC_019905.1 529064 530020 R COG3712 Fe2+-dicitrate sensor, membrane component; anti-FecI sigma factor FecR complement(529064..530020) Pseudomonas putida HB3267 14286854 YP_007227307.1 CDS B479_02240 NC_019905.1 530017 530535 R COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; RNA polymerase sigma factor complement(530017..530535) Pseudomonas putida HB3267 14286855 YP_007227308.1 CDS B479_02245 NC_019905.1 530741 531451 R COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; DNA polymerase III subunit epsilon complement(530741..531451) Pseudomonas putida HB3267 14286856 YP_007227309.1 CDS B479_02250 NC_019905.1 531448 533385 R COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains; hypothetical protein complement(531448..533385) Pseudomonas putida HB3267 14286857 YP_007227310.1 CDS B479_02255 NC_019905.1 533565 534041 D COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; response regulator receiver protein 533565..534041 Pseudomonas putida HB3267 14286858 YP_007227311.1 CDS B479_02260 NC_019905.1 534181 536358 R COG2225 Malate synthase; malate synthase G complement(534181..536358) Pseudomonas putida HB3267 14286859 YP_007227312.1 CDS B479_02265 NC_019905.1 536809 537327 D COG2716 Glycine cleavage system regulatory protein; ACT domain-containing protein 536809..537327 Pseudomonas putida HB3267 14286860 YP_007227313.1 CDS B479_02270 NC_019905.1 537660 538547 R COG2962 Predicted permeases; transporter DMT superfamily protein complement(537660..538547) Pseudomonas putida HB3267 14286861 YP_007227314.1 CDS B479_02275 NC_019905.1 538612 539586 R COG2334 Putative homoserine kinase type II (protein kinase fold); serine/threonine protein kinase complement(538612..539586) Pseudomonas putida HB3267 14286862 YP_007227315.1 CDS B479_02280 NC_019905.1 539688 540452 R COG2005 N-terminal domain of molybdenum-binding protein; ModE family transcriptional regulator complement(539688..540452) Pseudomonas putida HB3267 14286863 YP_007227316.1 CDS B479_02285 NC_019905.1 540625 541356 R COG1040 Predicted amidophosphoribosyltransferases; phosphoribosyltransferase complement(540625..541356) Pseudomonas putida HB3267 14286864 YP_007227317.1 CDS B479_02290 NC_019905.1 541446 542504 D COG0502 Biotin synthase and related enzymes; biotin synthase 541446..542504 Pseudomonas putida HB3267 14286865 YP_007227318.1 CDS B479_02295 NC_019905.1 542506 543678 D COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; 8-amino-7-oxononanoate synthase 542506..543678 Pseudomonas putida HB3267 14286866 YP_007227319.1 CDS B479_02300 NC_019905.1 543671 544402 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); carboxylesterase 543671..544402 Pseudomonas putida HB3267 14286867 YP_007227320.1 CDS B479_02305 NC_019905.1 544395 545213 D COG0500 SAM-dependent methyltransferases; biotin biosynthesis protein BioC 544395..545213 Pseudomonas putida HB3267 14286868 YP_007227321.1 CDS bioD NC_019905.1 545224 545904 D COG0132 Dethiobiotin synthetase; dithiobiotin synthetase 545224..545904 Pseudomonas putida HB3267 14286869 YP_007227322.1 CDS B479_02315 NC_019905.1 546135 546431 D hypothetical protein 546135..546431 Pseudomonas putida HB3267 14286870 YP_007227323.1 CDS B479_02320 NC_019905.1 546718 548523 D COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase 546718..548523 Pseudomonas putida HB3267 14286871 YP_007227324.1 CDS B479_02325 NC_019905.1 548874 550076 D COG2199 FOG: GGDEF domain; diguanylate cyclase 548874..550076 Pseudomonas putida HB3267 14286872 YP_007227325.1 CDS B479_02330 NC_019905.1 550200 551978 D COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase 550200..551978 Pseudomonas putida HB3267 14286873 YP_007227326.1 CDS B479_02335 NC_019905.1 552333 553256 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(552333..553256) Pseudomonas putida HB3267 14286874 YP_007227327.1 CDS B479_02340 NC_019905.1 553465 554745 D COG4992 Ornithine/acetylornithine aminotransferase; class III aminotransferase 553465..554745 Pseudomonas putida HB3267 14286875 YP_007227328.1 CDS B479_02345 NC_019905.1 554899 555057 D COG0401 Uncharacterized homolog of Blt101; hypothetical protein 554899..555057 Pseudomonas putida HB3267 14286876 YP_007227329.1 CDS B479_02350 NC_019905.1 555190 556998 R COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; peptidase S9 prolyl oligopeptidase complement(555190..556998) Pseudomonas putida HB3267 14286877 YP_007227330.1 CDS B479_02355 NC_019905.1 556979 558139 R COG0535 Predicted Fe-S oxidoreductases; pyrroloquinoline quinone biosynthesis protein PqqE complement(556979..558139) Pseudomonas putida HB3267 14286878 YP_007227331.1 CDS B479_02360 NC_019905.1 558111 558386 R pyrroloquinoline quinone biosynthesis protein PqqD complement(558111..558386) Pseudomonas putida HB3267 14286879 YP_007227332.1 CDS B479_02365 NC_019905.1 558383 559138 R COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C; pyrroloquinoline quinone biosynthesis protein PqqC complement(558383..559138) Pseudomonas putida HB3267 14286880 YP_007227333.1 CDS B479_02370 NC_019905.1 559295 560206 R COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I; pyrroloquinoline quinone biosynthesis protein PqqB complement(559295..560206) Pseudomonas putida HB3267 14286881 YP_007227334.1 CDS B479_02375 NC_019905.1 560285 560356 R coenzyme PQQ biosynthesis protein A complement(560285..560356) Pseudomonas putida HB3267 14286882 YP_007227335.1 CDS B479_02380 NC_019905.1 560515 562815 R COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like; coenzyme PQQ biosynthesis protein PqqF complement(560515..562815) Pseudomonas putida HB3267 14286883 YP_007227336.1 CDS B479_02385 NC_019905.1 562975 563769 R COG0388 Predicted amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(562975..563769) Pseudomonas putida HB3267 14286884 YP_007227337.1 CDS B479_02390 NC_019905.1 563784 565466 R COG1231 Monoamine oxidase; amine oxidase complement(563784..565466) Pseudomonas putida HB3267 14286885 YP_007227338.1 CDS B479_02395 NC_019905.1 566067 566357 D hypothetical protein 566067..566357 Pseudomonas putida HB3267 14286886 YP_007227339.1 CDS B479_02400 NC_019905.1 566371 566832 R COG1522 Transcriptional regulators; AsnC family transcriptional regulator complement(566371..566832) Pseudomonas putida HB3267 14286887 YP_007227340.1 CDS B479_02405 NC_019905.1 567302 568240 D COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; 6-hydroxy-3-succinoylpyridine hydroxylase 567302..568240 Pseudomonas putida HB3267 14286888 YP_007227341.1 CDS B479_02410 NC_019905.1 568408 572151 R COG2202 FOG: PAS/PAC domain; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(568408..572151) Pseudomonas putida HB3267 14291707 YP_007227342.1 CDS B479_02415 NC_019905.1 572465 574315 R COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase sigma factor RpoD complement(572465..574315) Pseudomonas putida HB3267 14286890 YP_007227343.1 CDS dnaG NC_019905.1 574383 576365 R COG0358 DNA primase (bacterial type); DNA primase complement(574383..576365) Pseudomonas putida HB3267 14286891 YP_007227344.1 CDS rpsU NC_019905.1 576669 576884 R COG0828 Ribosomal protein S21; 30S ribosomal protein S21 complement(576669..576884) Pseudomonas putida HB3267 14286892 YP_007227345.1 CDS B479_02430 NC_019905.1 577089 578114 D COG0533 Metal-dependent proteases with possible chaperone activity; UGMP family protein 577089..578114 Pseudomonas putida HB3267 14286893 YP_007227346.1 CDS B479_02435 NC_019905.1 578118 578687 R COG0344 Predicted membrane protein; glycerol-3-phosphate acyltransferase PlsY complement(578118..578687) Pseudomonas putida HB3267 14286894 YP_007227347.1 CDS B479_02440 NC_019905.1 578762 579118 D COG1539 Dihydroneopterin aldolase; dihydroneopterin aldolase 578762..579118 Pseudomonas putida HB3267 14286895 YP_007227348.1 CDS B479_02445 NC_019905.1 579109 579618 D COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 579109..579618 Pseudomonas putida HB3267 14286896 YP_007227349.1 CDS cca NC_019905.1 579667 580773 R COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase complement(579667..580773) Pseudomonas putida HB3267 14286897 YP_007227350.1 CDS B479_02455 NC_019905.1 580829 582397 R COG2719 Uncharacterized conserved protein; SpoVR family protein complement(580829..582397) Pseudomonas putida HB3267 14286898 YP_007227351.1 CDS B479_02460 NC_019905.1 582394 583665 R COG2718 Uncharacterized conserved protein; hypothetical protein complement(582394..583665) Pseudomonas putida HB3267 14286899 YP_007227352.1 CDS B479_02465 NC_019905.1 583796 585718 R COG2766 Putative Ser protein kinase; PrkA family serine protein kinase complement(583796..585718) Pseudomonas putida HB3267 14286900 YP_007227353.1 CDS glpE NC_019905.1 586002 586331 R COG0607 Rhodanese-related sulfurtransferase; thiosulfate sulfurtransferase complement(586002..586331) Pseudomonas putida HB3267 14286901 YP_007227354.1 CDS apaH NC_019905.1 586346 587212 R COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases; diadenosine tetraphosphatase complement(586346..587212) Pseudomonas putida HB3267 14286902 YP_007227355.1 CDS apaG NC_019905.1 587212 587592 R COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport; CO2+/MG2+ efflux protein ApaG complement(587212..587592) Pseudomonas putida HB3267 14286903 YP_007227356.1 CDS ksgA NC_019905.1 587913 588713 R COG0030 Dimethyladenosine transferase (rRNA methylation); 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein complement(587913..588713) Pseudomonas putida HB3267 14286904 YP_007227357.1 CDS pdxA NC_019905.1 588710 589699 R COG1995 Pyridoxal phosphate biosynthesis protein; 4-hydroxythreonine-4-phosphate dehydrogenase complement(588710..589699) Pseudomonas putida HB3267 14286905 YP_007227358.1 CDS B479_02495 NC_019905.1 589696 591015 R COG0760 Parvulin-like peptidyl-prolyl isomerase; SurA domain-containing protein complement(589696..591015) Pseudomonas putida HB3267 14286906 YP_007227359.1 CDS B479_02500 NC_019905.1 590996 593797 R COG1452 Organic solvent tolerance protein OstA; organic solvent tolerance protein complement(590996..593797) Pseudomonas putida HB3267 14286907 YP_007227360.1 CDS B479_02505 NC_019905.1 593928 594947 D COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases; aminoglycoside phosphotransferase 593928..594947 Pseudomonas putida HB3267 14286908 YP_007227361.1 CDS B479_02510 NC_019905.1 594944 595615 D COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); nucleotidyl transferase subunit 594944..595615 Pseudomonas putida HB3267 14286909 YP_007227362.1 CDS B479_02515 NC_019905.1 595617 596384 D COG1076 DnaJ-domain-containing proteins 1; heat shock protein DnaJ domain-containing protein 595617..596384 Pseudomonas putida HB3267 14286910 YP_007227363.1 CDS B479_02520 NC_019905.1 596493 597491 R COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); hypothetical protein complement(596493..597491) Pseudomonas putida HB3267 14286911 YP_007227364.1 CDS B479_02525 NC_019905.1 597586 599973 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; PAS/PAC sensor signal transduction histidine kinase 597586..599973 Pseudomonas putida HB3267 14286912 YP_007227365.1 CDS B479_02530 NC_019905.1 599984 600613 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; two component LuxR family transcriptional regulator 599984..600613 Pseudomonas putida HB3267 14286913 YP_007227366.1 CDS B479_02535 NC_019905.1 600907 602031 D COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; spermidine/putrescine ABC transporter ATPase 600907..602031 Pseudomonas putida HB3267 14286914 YP_007227367.1 CDS B479_02540 NC_019905.1 602072 603106 D COG0687 Spermidine/putrescine-binding periplasmic protein; extracellular solute-binding protein 602072..603106 Pseudomonas putida HB3267 14286915 YP_007227368.1 CDS B479_02545 NC_019905.1 603261 604508 D COG1176 ABC-type spermidine/putrescine transport system, permease component I; binding-protein-dependent transport system inner membrane protein 603261..604508 Pseudomonas putida HB3267 14286916 YP_007227369.1 CDS B479_02550 NC_019905.1 604520 605347 D COG1177 ABC-type spermidine/putrescine transport system, permease component II; binding-protein-dependent transport system inner membrane protein 604520..605347 Pseudomonas putida HB3267 14286917 YP_007227370.1 CDS B479_02555 NC_019905.1 605566 606240 D COG0036 Pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase 605566..606240 Pseudomonas putida HB3267 14286918 YP_007227371.1 CDS B479_02560 NC_019905.1 606237 607055 D COG0546 Predicted phosphatases; phosphoglycolate phosphatase 606237..607055 Pseudomonas putida HB3267 14286919 YP_007227372.1 CDS B479_02565 NC_019905.1 607125 608606 D COG0147 Anthranilate/para-aminobenzoate synthases component I; anthranilate synthase component I 607125..608606 Pseudomonas putida HB3267 14286920 YP_007227373.1 CDS B479_02570 NC_019905.1 608639 610519 R COG3240 Phospholipase/lecithinase/hemolysin; outer membrane autotransporter complement(608639..610519) Pseudomonas putida HB3267 14286921 YP_007227374.1 CDS B479_02575 NC_019905.1 610653 610751 D hypothetical protein 610653..610751 Pseudomonas putida HB3267 14286922 YP_007227375.1 CDS B479_02580 NC_019905.1 610888 611481 D COG0512 Anthranilate/para-aminobenzoate synthases component II; anthranilate synthase component II 610888..611481 Pseudomonas putida HB3267 14286923 YP_007227376.1 CDS trpD NC_019905.1 611491 612540 D COG0547 Anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase 611491..612540 Pseudomonas putida HB3267 14286924 YP_007227377.1 CDS trpC NC_019905.1 612537 613370 D COG0134 Indole-3-glycerol phosphate synthase; indole-3-glycerol-phosphate synthase 612537..613370 Pseudomonas putida HB3267 14286925 YP_007227378.1 CDS B479_02595 NC_019905.1 613474 614178 D COG0095 Lipoate-protein ligase A; hypothetical protein 613474..614178 Pseudomonas putida HB3267 14286926 YP_007227379.1 CDS B479_02600 NC_019905.1 614175 614819 R COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; DNA-binding transcriptional dual regulator Crp complement(614175..614819) Pseudomonas putida HB3267 14286927 YP_007227380.1 CDS B479_02605 NC_019905.1 615011 615439 D COG1765 Predicted redox protein, regulator of disulfide bond formation; OsmC family protein 615011..615439 Pseudomonas putida HB3267 14286928 YP_007227381.1 CDS B479_02610 NC_019905.1 615556 616596 R hypothetical protein complement(615556..616596) Pseudomonas putida HB3267 14286929 YP_007227382.1 CDS B479_02615 NC_019905.1 616607 617254 R COG2941 Ubiquinone biosynthesis protein COQ7; ubiquinone biosynthesis protein COQ7-like protein complement(616607..617254) Pseudomonas putida HB3267 14286930 YP_007227383.1 CDS B479_02620 NC_019905.1 617320 617658 R COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; histidine triad (HIT) protein complement(617320..617658) Pseudomonas putida HB3267 14286931 YP_007227384.1 CDS B479_02625 NC_019905.1 617722 618504 R COG0300 Short-chain dehydrogenases of various substrate specificities; short-chain dehydrogenase/reductase SDR complement(617722..618504) Pseudomonas putida HB3267 14286932 YP_007227385.1 CDS B479_02630 NC_019905.1 618572 619528 R COG2070 Dioxygenases related to 2-nitropropane dioxygenase; 2-nitropropane dioxygenase complement(618572..619528) Pseudomonas putida HB3267 14286933 YP_007227386.1 CDS B479_02635 NC_019905.1 619557 619982 R COG1981 Predicted membrane protein; hypothetical protein complement(619557..619982) Pseudomonas putida HB3267 14286934 YP_007227387.1 CDS argC NC_019905.1 620124 621158 D COG0002 Acetylglutamate semialdehyde dehydrogenase; N-acetyl-gamma-glutamyl-phosphate reductase 620124..621158 Pseudomonas putida HB3267 14286935 YP_007227388.1 CDS B479_02645 NC_019905.1 621305 621655 D COG0316 Uncharacterized conserved protein; iron-sulfur cluster insertion protein ErpA 621305..621655 Pseudomonas putida HB3267 14286936 YP_007227389.1 CDS anmK NC_019905.1 621715 622806 R COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases; anhydro-N-acetylmuramic acid kinase complement(621715..622806) Pseudomonas putida HB3267 14286937 YP_007227390.1 CDS B479_02655 NC_019905.1 622811 624232 R COG0739 Membrane proteins related to metalloendopeptidases; peptidase M23B complement(622811..624232) Pseudomonas putida HB3267 14286938 YP_007227391.1 CDS B479_02660 NC_019905.1 624446 625645 D COG0162 Tyrosyl-tRNA synthetase; tyrosyl-tRNA ligase 624446..625645 Pseudomonas putida HB3267 14286939 YP_007227392.1 CDS B479_02665 NC_019905.1 631390 632349 D COG1654 Biotin operon repressor; bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor 631390..632349 Pseudomonas putida HB3267 14291777 YP_007227393.1 CDS B479_02670 NC_019905.1 632339 633088 D COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor; pantothenate kinase 632339..633088 Pseudomonas putida HB3267 14286941 YP_007227394.1 CDS B479_02675 NC_019905.1 633096 633521 D hypothetical protein 633096..633521 Pseudomonas putida HB3267 14286942 YP_007227395.1 CDS B479_02680 NC_019905.1 634303 634653 D COG0050 GTPases - translation elongation factors; elongation factor Tu 634303..634653 Pseudomonas putida HB3267 14291710 YP_007227396.1 CDS B479_02685 NC_019905.1 634568 635233 D COG0050 GTPases - translation elongation factors; elongation factor Tu 634568..635233 Pseudomonas putida HB3267 14286944 YP_007227397.1 CDS secE NC_019905.1 635408 635776 D COG0690 Preprotein translocase subunit SecE; preprotein translocase subunit SecE 635408..635776 Pseudomonas putida HB3267 14291711 YP_007227398.1 CDS nusG NC_019905.1 635786 636319 D COG0250 Transcription antiterminator; transcription antitermination protein NusG 635786..636319 Pseudomonas putida HB3267 14286946 YP_007227399.1 CDS rplK NC_019905.1 636439 636870 D COG0080 Ribosomal protein L11; 50S ribosomal protein L11 636439..636870 Pseudomonas putida HB3267 14286947 YP_007227400.1 CDS rplA NC_019905.1 636870 637565 D COG0081 Ribosomal protein L1; 50S ribosomal protein L1 636870..637565 Pseudomonas putida HB3267 14286948 YP_007227401.1 CDS rplJ NC_019905.1 637763 638263 D COG0244 Ribosomal protein L10; 50S ribosomal protein L10 637763..638263 Pseudomonas putida HB3267 14286949 YP_007227402.1 CDS rplL NC_019905.1 638342 638713 D COG0222 Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 638342..638713 Pseudomonas putida HB3267 14286950 YP_007227403.1 CDS rpoB NC_019905.1 638934 643007 D COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; DNA-directed RNA polymerase subunit beta 638934..643007 Pseudomonas putida HB3267 14286951 YP_007227404.1 CDS B479_02725 NC_019905.1 643072 647271 D COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit; DNA-directed RNA polymerase subunit beta' 643072..647271 Pseudomonas putida HB3267 14286952 YP_007227405.1 CDS rpsL NC_019905.1 647483 647854 D COG0048 Ribosomal protein S12; 30S ribosomal protein S12 647483..647854 Pseudomonas putida HB3267 14286953 YP_007227406.1 CDS B479_02735 NC_019905.1 647961 648431 D COG0049 Ribosomal protein S7; 30S ribosomal protein S7 647961..648431 Pseudomonas putida HB3267 14286954 YP_007227407.1 CDS B479_02740 NC_019905.1 648462 650609 D COG0480 Translation elongation factors (GTPases); elongation factor G 648462..650609 Pseudomonas putida HB3267 14286955 YP_007227408.1 CDS B479_02745 NC_019905.1 650637 651887 D COG0050 GTPases - translation elongation factors; elongation factor Tu 650637..651887 Pseudomonas putida HB3267 14286956 YP_007227409.1 CDS rpsJ NC_019905.1 651973 652284 D COG0051 Ribosomal protein S10; 30S ribosomal protein S10 651973..652284 Pseudomonas putida HB3267 14286957 YP_007227410.1 CDS rplC NC_019905.1 652365 653000 D COG0087 Ribosomal protein L3; 50S ribosomal protein L3 652365..653000 Pseudomonas putida HB3267 14286958 YP_007227411.1 CDS rplD NC_019905.1 653013 653615 D COG0088 Ribosomal protein L4; 50S ribosomal protein L4 653013..653615 Pseudomonas putida HB3267 14286959 YP_007227412.1 CDS rplW NC_019905.1 653612 653911 D COG0089 Ribosomal protein L23; 50S ribosomal protein L23 653612..653911 Pseudomonas putida HB3267 14286960 YP_007227413.1 CDS rplB NC_019905.1 653926 654750 D COG0090 Ribosomal protein L2; 50S ribosomal protein L2 653926..654750 Pseudomonas putida HB3267 14286961 YP_007227414.1 CDS rpsS NC_019905.1 654767 655042 D COG0185 Ribosomal protein S19; 30S ribosomal protein S19 654767..655042 Pseudomonas putida HB3267 14286962 YP_007227415.1 CDS rplV NC_019905.1 655054 655386 D COG0091 Ribosomal protein L22; 50S ribosomal protein L22 655054..655386 Pseudomonas putida HB3267 14286963 YP_007227416.1 CDS rpsC NC_019905.1 655400 656086 D COG0092 Ribosomal protein S3; 30S ribosomal protein S3 655400..656086 Pseudomonas putida HB3267 14286964 YP_007227417.1 CDS rplP NC_019905.1 656099 656512 D COG0197 Ribosomal protein L16/L10E; 50S ribosomal protein L16 656099..656512 Pseudomonas putida HB3267 14286965 YP_007227418.1 CDS B479_02795 NC_019905.1 656512 656703 D COG0255 Ribosomal protein L29; 50S ribosomal protein L29 656512..656703 Pseudomonas putida HB3267 14286966 YP_007227419.1 CDS rpsQ NC_019905.1 656706 656972 D COG0186 Ribosomal protein S17; 30S ribosomal protein S17 656706..656972 Pseudomonas putida HB3267 14286967 YP_007227420.1 CDS rplN NC_019905.1 656996 657364 D COG0093 Ribosomal protein L14; 50S ribosomal protein L14 656996..657364 Pseudomonas putida HB3267 14286968 YP_007227421.1 CDS rplX NC_019905.1 657376 657690 D COG0198 Ribosomal protein L24; 50S ribosomal protein L24 657376..657690 Pseudomonas putida HB3267 14286969 YP_007227422.1 CDS rplE NC_019905.1 657711 658250 D COG0094 Ribosomal protein L5; 50S ribosomal protein L5 657711..658250 Pseudomonas putida HB3267 14286970 YP_007227423.1 CDS rpsN NC_019905.1 658264 658569 D COG0199 Ribosomal protein S14; 30S ribosomal protein S14 658264..658569 Pseudomonas putida HB3267 14286971 YP_007227424.1 CDS rpsH NC_019905.1 658779 659171 D COG0096 Ribosomal protein S8; 30S ribosomal protein S8 658779..659171 Pseudomonas putida HB3267 14286972 YP_007227425.1 CDS rplF NC_019905.1 659184 659717 D COG0097 Ribosomal protein L6P/L9E; 50S ribosomal protein L6 659184..659717 Pseudomonas putida HB3267 14286973 YP_007227426.1 CDS rplR NC_019905.1 659728 660078 D COG0256 Ribosomal protein L18; 50S ribosomal protein L18 659728..660078 Pseudomonas putida HB3267 14286974 YP_007227427.1 CDS rpsE NC_019905.1 660082 660582 D COG0098 Ribosomal protein S5; 30S ribosomal protein S5 660082..660582 Pseudomonas putida HB3267 14286975 YP_007227428.1 CDS rpmD NC_019905.1 660585 660761 D COG1841 Ribosomal protein L30/L7E; 50S ribosomal protein L30 660585..660761 Pseudomonas putida HB3267 14286976 YP_007227429.1 CDS rplO NC_019905.1 660765 661199 D COG0200 Ribosomal protein L15; 50S ribosomal protein L15 660765..661199 Pseudomonas putida HB3267 14286977 YP_007227430.1 CDS secY NC_019905.1 661200 662531 D COG0201 Preprotein translocase subunit SecY; preprotein translocase subunit SecY 661200..662531 Pseudomonas putida HB3267 14286978 YP_007227431.1 CDS B479_02860 NC_019905.1 662560 662676 D COG0257 Ribosomal protein L36; 50S ribosomal protein L36 662560..662676 Pseudomonas putida HB3267 14286979 YP_007227432.1 CDS rpsM NC_019905.1 662808 663164 D COG0099 Ribosomal protein S13; 30S ribosomal protein S13 662808..663164 Pseudomonas putida HB3267 14286980 YP_007227433.1 CDS B479_02870 NC_019905.1 663183 663572 D COG0100 Ribosomal protein S11; 30S ribosomal protein S11 663183..663572 Pseudomonas putida HB3267 14286981 YP_007227434.1 CDS rpsD NC_019905.1 663588 664208 D COG0522 Ribosomal protein S4 and related proteins; 30S ribosomal protein S4 663588..664208 Pseudomonas putida HB3267 14286982 YP_007227435.1 CDS B479_02880 NC_019905.1 664231 665232 D COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit; DNA-directed RNA polymerase subunit alpha 664231..665232 Pseudomonas putida HB3267 14286983 YP_007227436.1 CDS rplQ NC_019905.1 665275 665661 D COG0203 Ribosomal protein L17; 50S ribosomal protein L17 665275..665661 Pseudomonas putida HB3267 14286984 YP_007227437.1 CDS B479_02890 NC_019905.1 665834 667273 D COG0753 Catalase; catalase 665834..667273 Pseudomonas putida HB3267 14286985 YP_007227438.1 CDS B479_02895 NC_019905.1 667438 667902 D COG2193 Bacterioferritin (cytochrome b1); bacterioferritin 667438..667902 Pseudomonas putida HB3267 14286986 YP_007227439.1 CDS uvrA NC_019905.1 668039 670873 R COG0178 Excinuclease ATPase subunit; excinuclease ABC subunit A complement(668039..670873) Pseudomonas putida HB3267 14286987 YP_007227440.1 CDS B479_02905 NC_019905.1 671003 672397 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 671003..672397 Pseudomonas putida HB3267 14286988 YP_007227441.1 CDS B479_02910 NC_019905.1 672407 672949 D COG0629 Single-stranded DNA-binding protein; single-stranded DNA-binding protein 672407..672949 Pseudomonas putida HB3267 14286989 YP_007227442.1 CDS B479_02915 NC_019905.1 673093 674475 R COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; GntR family transcriptional regulator complement(673093..674475) Pseudomonas putida HB3267 14286990 YP_007227443.1 CDS B479_02920 NC_019905.1 674663 675460 D COG0730 Predicted permeases; hypothetical protein 674663..675460 Pseudomonas putida HB3267 14286991 YP_007227444.1 CDS B479_02925 NC_019905.1 675482 676243 D COG4221 Short-chain alcohol dehydrogenase of unknown specificity; short-chain dehydrogenase 675482..676243 Pseudomonas putida HB3267 14286992 YP_007227445.1 CDS B479_02930 NC_019905.1 676515 677105 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; molybdopterin oxidoreductase Fe4S4 region 676515..677105 Pseudomonas putida HB3267 14286993 YP_007227446.1 CDS B479_02935 NC_019905.1 677154 679583 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; formate dehydrogenase subunit alpha 677154..679583 Pseudomonas putida HB3267 14286994 YP_007227447.1 CDS B479_02940 NC_019905.1 679583 680533 D COG0437 Fe-S-cluster-containing hydrogenase components 1; nitrate-inducible formate dehydrogenase subunit beta 679583..680533 Pseudomonas putida HB3267 14286995 YP_007227448.1 CDS B479_02945 NC_019905.1 680530 681186 D COG2864 Cytochrome b subunit of formate dehydrogenase; formate dehydrogenase subunit gamma 680530..681186 Pseudomonas putida HB3267 14286996 YP_007227449.1 CDS B479_02950 NC_019905.1 681191 682111 D COG3058 Uncharacterized protein involved in formate dehydrogenase formation; formate dehydrogenase accessory protein FdhE 681191..682111 Pseudomonas putida HB3267 14286997 YP_007227450.1 CDS B479_02955 NC_019905.1 682270 683697 D COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; selenocysteine synthase 682270..683697 Pseudomonas putida HB3267 14286998 YP_007227451.1 CDS B479_02960 NC_019905.1 683694 685616 D COG3276 Selenocysteine-specific translation elongation factor; selenocysteine-specific elongation factor 683694..685616 Pseudomonas putida HB3267 14286999 YP_007227452.1 CDS B479_02965 NC_019905.1 685845 686834 R COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; asparaginase complement(685845..686834) Pseudomonas putida HB3267 14291712 YP_007227453.1 CDS B479_02970 NC_019905.1 686906 688348 R COG1115 Na+/alanine symporter; amino acid carrier protein complement(686906..688348) Pseudomonas putida HB3267 14287001 YP_007227454.1 CDS B479_02975 NC_019905.1 688527 689336 D COG1396 Predicted transcriptional regulators; Cro/CI family transcriptional regulator 688527..689336 Pseudomonas putida HB3267 14287002 YP_007227455.1 CDS B479_02980 NC_019905.1 689345 690139 R COG0730 Predicted permeases; hypothetical protein complement(689345..690139) Pseudomonas putida HB3267 14287003 YP_007227456.1 CDS B479_02985 NC_019905.1 690157 690555 R hypothetical protein complement(690157..690555) Pseudomonas putida HB3267 14287004 YP_007227457.1 CDS B479_02990 NC_019905.1 691462 692346 D COG1091 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 691462..692346 Pseudomonas putida HB3267 14287005 YP_007227458.1 CDS B479_02995 NC_019905.1 692339 693271 D COG0451 Nucleoside-diphosphate-sugar epimerases; NAD-dependent epimerase/dehydratase 692339..693271 Pseudomonas putida HB3267 14287006 YP_007227459.1 CDS B479_03000 NC_019905.1 693386 693829 R COG1733 Predicted transcriptional regulators; HxlR family transcriptional regulator complement(693386..693829) Pseudomonas putida HB3267 14287007 YP_007227460.1 CDS B479_03005 NC_019905.1 693932 695137 D COG0477 Permeases of the major facilitator superfamily; Major facilitator family transporter 693932..695137 Pseudomonas putida HB3267 14287008 YP_007227461.1 CDS B479_03010 NC_019905.1 695125 695808 R COG3047 Outer membrane protein W; OmpW family protein complement(695125..695808) Pseudomonas putida HB3267 14287009 YP_007227462.1 CDS B479_03015 NC_019905.1 695918 696412 R COG3495 Uncharacterized protein conserved in bacteria; lipoprotein complement(695918..696412) Pseudomonas putida HB3267 14287010 YP_007227463.1 CDS B479_03020 NC_019905.1 696500 697765 R COG0577 ABC-type antimicrobial peptide transport system, permease component; efflux ABC transporter permease complement(696500..697765) Pseudomonas putida HB3267 14287011 YP_007227464.1 CDS B479_03025 NC_019905.1 697765 698475 R COG1136 ABC-type antimicrobial peptide transport system, ATPase component; efflux ABC transporter ATP-binding protein complement(697765..698475) Pseudomonas putida HB3267 14287012 YP_007227465.1 CDS B479_03030 NC_019905.1 698476 699054 R hypothetical protein complement(698476..699054) Pseudomonas putida HB3267 14287013 YP_007227466.1 CDS B479_03035 NC_019905.1 699219 699530 D hypothetical protein 699219..699530 Pseudomonas putida HB3267 14287014 YP_007227467.1 CDS B479_03040 NC_019905.1 699662 700534 R COG3118 Thioredoxin domain-containing protein; thioredoxin complement(699662..700534) Pseudomonas putida HB3267 14287015 YP_007227468.1 CDS B479_03045 NC_019905.1 700566 701237 R COG3897 Predicted methyltransferase; type 12 methyltransferase complement(700566..701237) Pseudomonas putida HB3267 14287016 YP_007227469.1 CDS B479_03050 NC_019905.1 701238 701690 R COG3126 Uncharacterized protein conserved in bacteria; hypothetical protein complement(701238..701690) Pseudomonas putida HB3267 14287017 YP_007227470.1 CDS nrdR NC_019905.1 701797 702261 D COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains; transcriptional regulator NrdR 701797..702261 Pseudomonas putida HB3267 14287018 YP_007227471.1 CDS B479_03060 NC_019905.1 702264 703394 D COG0117 Pyrimidine deaminase; riboflavin biosynthesis protein RibD 702264..703394 Pseudomonas putida HB3267 14287019 YP_007227472.1 CDS B479_03065 NC_019905.1 703437 704102 D COG0307 Riboflavin synthase alpha chain; riboflavin synthase subunit alpha 703437..704102 Pseudomonas putida HB3267 14287020 YP_007227473.1 CDS B479_03070 NC_019905.1 704121 705212 D COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 704121..705212 Pseudomonas putida HB3267 14287021 YP_007227474.1 CDS ribH NC_019905.1 705305 705781 D COG0054 Riboflavin synthase beta-chain; 6,7-dimethyl-8-ribityllumazine synthase 705305..705781 Pseudomonas putida HB3267 14287022 YP_007227475.1 CDS nusB NC_019905.1 705778 706278 D COG0781 Transcription termination factor; transcription antitermination protein NusB 705778..706278 Pseudomonas putida HB3267 14287023 YP_007227476.1 CDS B479_03085 NC_019905.1 706297 707265 D COG0611 Thiamine monophosphate kinase; thiamine monophosphate kinase 706297..707265 Pseudomonas putida HB3267 14287024 YP_007227477.1 CDS B479_03090 NC_019905.1 707262 707765 D COG1267 Phosphatidylglycerophosphatase A and related proteins; phosphatidylglycerophosphatase A 707262..707765 Pseudomonas putida HB3267 14287025 YP_007227478.1 CDS B479_03095 NC_019905.1 707782 708525 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; hypothetical protein 707782..708525 Pseudomonas putida HB3267 14287026 YP_007227479.1 CDS ribA NC_019905.1 708690 709307 D COG0807 GTP cyclohydrolase II; GTP cyclohydrolase II 708690..709307 Pseudomonas putida HB3267 14287027 YP_007227480.1 CDS B479_03105 NC_019905.1 709304 709723 D hypothetical protein 709304..709723 Pseudomonas putida HB3267 14287028 YP_007227481.1 CDS B479_03110 NC_019905.1 709723 710535 D COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; periplasmic binding protein 709723..710535 Pseudomonas putida HB3267 14287029 YP_007227482.1 CDS B479_03115 NC_019905.1 710651 712546 R COG1154 Deoxyxylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase complement(710651..712546) Pseudomonas putida HB3267 14287030 YP_007227483.1 CDS B479_03120 NC_019905.1 712724 713611 R COG0142 Geranylgeranyl pyrophosphate synthase; polyprenyl synthetase complement(712724..713611) Pseudomonas putida HB3267 14287031 YP_007227484.1 CDS B479_03125 NC_019905.1 713608 713850 R COG1722 Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit complement(713608..713850) Pseudomonas putida HB3267 14287032 YP_007227485.1 CDS ribB NC_019905.1 714048 714698 R COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(714048..714698) Pseudomonas putida HB3267 14287033 YP_007227486.1 CDS B479_03135 NC_019905.1 715012 716217 D COG1690 Uncharacterized conserved protein; hypothetical protein 715012..716217 Pseudomonas putida HB3267 14287034 YP_007227487.1 CDS B479_03140 NC_019905.1 716592 716834 D hypothetical protein 716592..716834 Pseudomonas putida HB3267 14287035 YP_007227488.1 CDS B479_03145 NC_019905.1 716992 717255 D hypothetical protein 716992..717255 Pseudomonas putida HB3267 14287036 YP_007227489.1 CDS B479_03150 NC_019905.1 717650 718288 R COG2010 Cytochrome c, mono- and diheme variants; cytochrome c family protein complement(717650..718288) Pseudomonas putida HB3267 14287037 YP_007227490.1 CDS B479_03155 NC_019905.1 718337 719284 R COG3667 Uncharacterized protein involved in copper resistance; copper resistance B complement(718337..719284) Pseudomonas putida HB3267 14287038 YP_007227491.1 CDS B479_03160 NC_019905.1 719274 719579 R COG3667 Uncharacterized protein involved in copper resistance; hypothetical protein complement(719274..719579) Pseudomonas putida HB3267 14287039 YP_007227492.1 CDS B479_03165 NC_019905.1 719594 721363 R COG2132 Putative multicopper oxidases; CopA family copper resistance protein complement(719594..721363) Pseudomonas putida HB3267 14287040 YP_007227493.1 CDS B479_03170 NC_019905.1 721697 722893 R COG0577 ABC-type antimicrobial peptide transport system, permease component; peptide ABC transporter permease complement(721697..722893) Pseudomonas putida HB3267 14287041 YP_007227494.1 CDS B479_03175 NC_019905.1 722893 724119 R COG0577 ABC-type antimicrobial peptide transport system, permease component; peptide ABC transporter permease complement(722893..724119) Pseudomonas putida HB3267 14287042 YP_007227495.1 CDS B479_03180 NC_019905.1 724104 724790 R COG1136 ABC-type antimicrobial peptide transport system, ATPase component; peptide ABC transporter ATPase complement(724104..724790) Pseudomonas putida HB3267 14287043 YP_007227496.1 CDS B479_03185 NC_019905.1 724787 725938 R COG0845 Membrane-fusion protein; efflux transporter, RND family, MFP subunit complement(724787..725938) Pseudomonas putida HB3267 14287044 YP_007227497.1 CDS B479_03190 NC_019905.1 726370 727071 R COG2932 Predicted transcriptional regulator; transcriptional regulator complement(726370..727071) Pseudomonas putida HB3267 14287045 YP_007227498.1 CDS B479_03195 NC_019905.1 727447 727974 R COG0221 Inorganic pyrophosphatase; inorganic pyrophosphatase complement(727447..727974) Pseudomonas putida HB3267 14287046 YP_007227499.1 CDS B479_03200 NC_019905.1 728068 728883 R COG3228 Uncharacterized protein conserved in bacteria; hypothetical protein complement(728068..728883) Pseudomonas putida HB3267 14287047 YP_007227500.1 CDS B479_03205 NC_019905.1 728893 729540 R COG0586 Uncharacterized membrane-associated protein; hypothetical protein complement(728893..729540) Pseudomonas putida HB3267 14287048 YP_007227501.1 CDS B479_03210 NC_019905.1 729791 730249 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; N-acetyltransferase GCN5 complement(729791..730249) Pseudomonas putida HB3267 14287049 YP_007227502.1 CDS B479_03215 NC_019905.1 730358 731176 R COG4302 Ethanolamine ammonia-lyase, small subunit; ethanolamine ammonia-lyase small subunit complement(730358..731176) Pseudomonas putida HB3267 14287050 YP_007227503.1 CDS B479_03220 NC_019905.1 731185 732579 R COG4303 Ethanolamine ammonia-lyase, large subunit; ethanolamine ammonia lyase large subunit complement(731185..732579) Pseudomonas putida HB3267 14287051 YP_007227504.1 CDS B479_03225 NC_019905.1 732626 734074 R COG0531 Amino acid transporters; ethanolamine transporter complement(732626..734074) Pseudomonas putida HB3267 14287052 YP_007227505.1 CDS B479_03230 NC_019905.1 734309 735829 R COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase complement(734309..735829) Pseudomonas putida HB3267 14287053 YP_007227506.1 CDS B479_03235 NC_019905.1 736085 737860 D COG3284 Transcriptional activator of acetoin/glycerol metabolism; Fis family GAF modulated sigma54 specific transcriptional regulator 736085..737860 Pseudomonas putida HB3267 14287054 YP_007227507.1 CDS B479_03240 NC_019905.1 738277 739626 D COG0773 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 738277..739626 Pseudomonas putida HB3267 14287055 YP_007227508.1 CDS B479_03245 NC_019905.1 739623 740252 D COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; aromatic acid decarboxylase 739623..740252 Pseudomonas putida HB3267 14287056 YP_007227509.1 CDS B479_03250 NC_019905.1 740249 740536 D hypothetical protein 740249..740536 Pseudomonas putida HB3267 14287057 YP_007227510.1 CDS B479_03255 NC_019905.1 740645 741289 R COG0702 Predicted nucleoside-diphosphate-sugar epimerases; hypothetical protein complement(740645..741289) Pseudomonas putida HB3267 14287058 YP_007227511.1 CDS B479_03260 NC_019905.1 741317 743116 R COG4642 Uncharacterized protein conserved in bacteria; MORN repeat-containing protein complement(741317..743116) Pseudomonas putida HB3267 14287059 YP_007227512.1 CDS B479_03265 NC_019905.1 743170 743304 D sensory box protein/GGDEF family protein 743170..743304 Pseudomonas putida HB3267 14287060 YP_007227513.1 CDS B479_03270 NC_019905.1 743399 744487 R COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; alcohol dehydrogenase complement(743399..744487) Pseudomonas putida HB3267 14287061 YP_007227514.1 CDS B479_03275 NC_019905.1 744516 745622 R COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase complement(744516..745622) Pseudomonas putida HB3267 14287062 YP_007227515.1 CDS B479_03280 NC_019905.1 745619 746641 R COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit; transketolase central region complement(745619..746641) Pseudomonas putida HB3267 14287063 YP_007227516.1 CDS B479_03285 NC_019905.1 746675 747652 R COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit; TPP-dependent acetoin dehydrogenase subunit alpha complement(746675..747652) Pseudomonas putida HB3267 14287064 YP_007227517.1 CDS B479_03290 NC_019905.1 747675 748730 R COG3199 Uncharacterized conserved protein; ATP-NAD/AcoX kinase complement(747675..748730) Pseudomonas putida HB3267 14287065 YP_007227518.1 CDS B479_03295 NC_019905.1 749013 750866 D COG3284 Transcriptional activator of acetoin/glycerol metabolism; GAF modulated sigma-54 specific Fis family transcriptional regulator 749013..750866 Pseudomonas putida HB3267 14287066 YP_007227519.1 CDS B479_03300 NC_019905.1 751041 752396 R COG0439 Biotin carboxylase; acetyl-CoA carboxylase biotin carboxylase subunit complement(751041..752396) Pseudomonas putida HB3267 14287067 YP_007227520.1 CDS B479_03305 NC_019905.1 752414 752875 R COG0511 Biotin carboxyl carrier protein; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit complement(752414..752875) Pseudomonas putida HB3267 14287068 YP_007227521.1 CDS B479_03310 NC_019905.1 752976 753431 R COG0757 3-dehydroquinate dehydratase II; 3-dehydroquinate dehydratase complement(752976..753431) Pseudomonas putida HB3267 14287069 YP_007227522.1 CDS dipZ NC_019905.1 753611 755383 R COG4232 Thiol:disulfide interchange protein; thiol:disulfide interchange protein precursor complement(753611..755383) Pseudomonas putida HB3267 14287070 YP_007227523.1 CDS B479_03320 NC_019905.1 755585 757546 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(755585..757546) Pseudomonas putida HB3267 14287071 YP_007227524.1 CDS B479_03325 NC_019905.1 757775 759133 R COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; response regulator receiver modulated diguanylate cyclase complement(757775..759133) Pseudomonas putida HB3267 14287072 YP_007227525.1 CDS B479_03330 NC_019905.1 759382 760449 D COG5345 Uncharacterized protein conserved in bacteria; hypothetical protein 759382..760449 Pseudomonas putida HB3267 14287073 YP_007227526.1 CDS B479_03335 NC_019905.1 760452 760988 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; NUDIX hydrolase 760452..760988 Pseudomonas putida HB3267 14287074 YP_007227527.1 CDS B479_03340 NC_019905.1 761308 761679 D COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins; translation initiation factor SUI1 761308..761679 Pseudomonas putida HB3267 14287075 YP_007227528.1 CDS B479_03345 NC_019905.1 761831 763744 D COG1166 Arginine decarboxylase (spermidine biosynthesis); arginine decarboxylase 761831..763744 Pseudomonas putida HB3267 14287076 YP_007227529.1 CDS B479_03350 NC_019905.1 763979 764434 D COG1943 Transposase and inactivated derivatives; hypothetical protein 763979..764434 Pseudomonas putida HB3267 14287077 YP_007227530.1 CDS B479_03355 NC_019905.1 764516 765853 R COG0534 Na+-driven multidrug efflux pump; MATE efflux family protein complement(764516..765853) Pseudomonas putida HB3267 14287078 YP_007227531.1 CDS B479_03360 NC_019905.1 766104 771005 D COG2373 Large extracellular alpha-helical protein; alpha-2-macroglobulin domain-containing protein 766104..771005 Pseudomonas putida HB3267 14287079 YP_007227532.1 CDS B479_03365 NC_019905.1 771139 771432 R hypothetical protein complement(771139..771432) Pseudomonas putida HB3267 14287080 YP_007227533.1 CDS B479_03370 NC_019905.1 771573 773864 D COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC; penicillin-binding protein 1C 771573..773864 Pseudomonas putida HB3267 14287081 YP_007227534.1 CDS B479_03375 NC_019905.1 774090 775754 D COG2831 Hemolysin activation/secretion protein; polypeptide-transport-associated domain-containing protein 774090..775754 Pseudomonas putida HB3267 14287082 YP_007227535.1 CDS B479_03380 NC_019905.1 775890 776663 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; two component LuxR family transcriptional regulator complement(775890..776663) Pseudomonas putida HB3267 14287083 YP_007227536.1 CDS B479_03385 NC_019905.1 776788 777258 R peptidase A24A prepilin type IV complement(776788..777258) Pseudomonas putida HB3267 14287084 YP_007227537.1 CDS B479_03390 NC_019905.1 777538 778107 R hypothetical protein complement(777538..778107) Pseudomonas putida HB3267 14287085 YP_007227538.1 CDS B479_03395 NC_019905.1 778127 778762 R hypothetical protein complement(778127..778762) Pseudomonas putida HB3267 14287086 YP_007227539.1 CDS B479_03400 NC_019905.1 778784 779533 R COG0500 SAM-dependent methyltransferases; type 12 methyltransferase complement(778784..779533) Pseudomonas putida HB3267 14287087 YP_007227540.1 CDS B479_03405 NC_019905.1 779530 779835 R COG1694 Predicted pyrophosphatase; hypothetical protein complement(779530..779835) Pseudomonas putida HB3267 14287088 YP_007227541.1 CDS B479_03410 NC_019905.1 780026 780877 R COG2030 Acyl dehydratase; dehydratase complement(780026..780877) Pseudomonas putida HB3267 14287089 YP_007227542.1 CDS fabG NC_019905.1 780880 782232 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 3-ketoacyl-(acyl-carrier-protein) reductase complement(780880..782232) Pseudomonas putida HB3267 14287090 YP_007227543.1 CDS B479_03420 NC_019905.1 782351 783628 D COG0183 Acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 782351..783628 Pseudomonas putida HB3267 14287091 YP_007227544.1 CDS B479_03425 NC_019905.1 783668 784447 D COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator 783668..784447 Pseudomonas putida HB3267 14287092 YP_007227545.1 CDS B479_03430 NC_019905.1 784582 786525 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(784582..786525) Pseudomonas putida HB3267 14287093 YP_007227546.1 CDS B479_03435 NC_019905.1 786692 787102 R COG0789 Predicted transcriptional regulators; MerR family transcriptional regulator complement(786692..787102) Pseudomonas putida HB3267 14287094 YP_007227547.1 CDS B479_03440 NC_019905.1 787099 789498 R COG2217 Cation transport ATPase; heavy metal translocating P-type ATPase complement(787099..789498) Pseudomonas putida HB3267 14287095 YP_007227548.1 CDS B479_03445 NC_019905.1 789551 789937 R hypothetical protein complement(789551..789937) Pseudomonas putida HB3267 14287096 YP_007227549.1 CDS B479_03450 NC_019905.1 790083 790280 D COG2608 Copper chaperone; heavy metal transport/detoxification protein 790083..790280 Pseudomonas putida HB3267 14287097 YP_007227550.1 CDS B479_03455 NC_019905.1 790515 791696 D COG0477 Permeases of the major facilitator superfamily; Bcr/CflA family multidrug resistance transporter 790515..791696 Pseudomonas putida HB3267 14287098 YP_007227551.1 CDS B479_03460 NC_019905.1 791647 791844 R hypothetical protein complement(791647..791844) Pseudomonas putida HB3267 14287099 YP_007227552.1 CDS B479_03465 NC_019905.1 792332 793045 D COG0640 Predicted transcriptional regulators; ArsR family transcriptional regulator 792332..793045 Pseudomonas putida HB3267 14287100 YP_007227553.1 CDS B479_03470 NC_019905.1 793077 794024 R COG1816 Adenosine deaminase; adenosine deaminase complement(793077..794024) Pseudomonas putida HB3267 14287101 YP_007227554.1 CDS B479_03475 NC_019905.1 794111 794797 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short chain dehydrogenase complement(794111..794797) Pseudomonas putida HB3267 14287102 YP_007227555.1 CDS B479_03480 NC_019905.1 795167 795751 R COG1739 Uncharacterized conserved protein; thymidylate synthase complement(795167..795751) Pseudomonas putida HB3267 14287103 YP_007227556.1 CDS B479_03485 NC_019905.1 795761 796423 R COG1309 Transcriptional regulator; TetR family transcriptional regulator complement(795761..796423) Pseudomonas putida HB3267 14287104 YP_007227557.1 CDS B479_03490 NC_019905.1 796514 797431 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(796514..797431) Pseudomonas putida HB3267 14287105 YP_007227558.1 CDS B479_03495 NC_019905.1 797550 798896 D COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; beta alanine--pyruvate transaminase 797550..798896 Pseudomonas putida HB3267 14287106 YP_007227559.1 CDS B479_03500 NC_019905.1 798970 800463 D COG1012 NAD-dependent aldehyde dehydrogenases; methylmalonate-semialdehyde dehydrogenase 798970..800463 Pseudomonas putida HB3267 14287107 YP_007227560.1 CDS B479_03505 NC_019905.1 806683 807342 D COG2995 Uncharacterized paraquat-inducible protein A; paraquat-inducible protein A 806683..807342 Pseudomonas putida HB3267 14291778 YP_007227561.1 CDS B479_03510 NC_019905.1 807329 807952 D COG2995 Uncharacterized paraquat-inducible protein A; paraquat-inducible protein A 807329..807952 Pseudomonas putida HB3267 14287109 YP_007227562.1 CDS B479_03515 NC_019905.1 807945 810245 D COG3008 Paraquat-inducible protein B; hypothetical protein 807945..810245 Pseudomonas putida HB3267 14287110 YP_007227563.1 CDS B479_03520 NC_019905.1 810309 810461 D urocanate hydratase 810309..810461 Pseudomonas putida HB3267 14287111 YP_007227564.1 CDS rpsT NC_019905.1 810488 810766 R COG0268 Ribosomal protein S20; 30S ribosomal protein S20 complement(810488..810766) Pseudomonas putida HB3267 14287112 YP_007227565.1 CDS B479_03530 NC_019905.1 811017 812555 D COG0728 Uncharacterized membrane protein, putative virulence factor; integral membrane protein MviN 811017..812555 Pseudomonas putida HB3267 14287113 YP_007227566.1 CDS B479_03535 NC_019905.1 812674 813624 D COG0196 FAD synthase; bifunctional riboflavin kinase/FMN adenylyltransferase 812674..813624 Pseudomonas putida HB3267 14287114 YP_007227567.1 CDS ileS NC_019905.1 813621 816452 D COG0060 Isoleucyl-tRNA synthetase; isoleucyl-tRNA ligase 813621..816452 Pseudomonas putida HB3267 14287115 YP_007227568.1 CDS lspA NC_019905.1 816445 816960 D COG0597 Lipoprotein signal peptidase; lipoprotein signal peptidase 816445..816960 Pseudomonas putida HB3267 14287116 YP_007227569.1 CDS B479_03550 NC_019905.1 816953 817390 D COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2; FKBP-type peptidylprolyl isomerase 816953..817390 Pseudomonas putida HB3267 14287117 YP_007227570.1 CDS ispH NC_019905.1 817405 818352 D COG0761 Penicillin tolerance protein; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 817405..818352 Pseudomonas putida HB3267 14287118 YP_007227571.1 CDS B479_03560 NC_019905.1 818487 818972 R type IV pili biogenesis protein FimT complement(818487..818972) Pseudomonas putida HB3267 14287119 YP_007227572.1 CDS B479_03565 NC_019905.1 819112 819294 D hypothetical protein 819112..819294 Pseudomonas putida HB3267 14287120 YP_007227573.1 CDS B479_03570 NC_019905.1 819291 819935 D hypothetical protein 819291..819935 Pseudomonas putida HB3267 14287121 YP_007227574.1 CDS B479_03575 NC_019905.1 819932 820396 D hypothetical protein 819932..820396 Pseudomonas putida HB3267 14287122 YP_007227575.1 CDS B479_03580 NC_019905.1 820398 820787 D COG4968 Tfp pilus assembly protein PilE; type IV pili biogenesis protein PilE 820398..820787 Pseudomonas putida HB3267 14287123 YP_007227576.1 CDS B479_03585 NC_019905.1 820842 821939 D COG0665 Glycine/D-amino acid oxidases (deaminating); FAD dependent oxidoreductase 820842..821939 Pseudomonas putida HB3267 14287124 YP_007227577.1 CDS B479_03590 NC_019905.1 822027 822257 R hypothetical protein complement(822027..822257) Pseudomonas putida HB3267 14287125 YP_007227578.1 CDS B479_03595 NC_019905.1 822352 823371 R COG4105 DNA uptake lipoprotein; putative competence lipoprotein ComL complement(822352..823371) Pseudomonas putida HB3267 14287126 YP_007227579.1 CDS B479_03600 NC_019905.1 823519 824481 D COG0564 Pseudouridylate synthases, 23S RNA-specific; RluA family pseudouridine synthase 823519..824481 Pseudomonas putida HB3267 14287127 YP_007227580.1 CDS B479_03605 NC_019905.1 824478 825218 D COG1496 Uncharacterized conserved protein; multi-copper polyphenol oxidoreductase, laccase 824478..825218 Pseudomonas putida HB3267 14287128 YP_007227581.1 CDS B479_03610 NC_019905.1 825459 828023 D COG0542 ATPases with chaperone activity, ATP-binding subunit; ATPase 825459..828023 Pseudomonas putida HB3267 14287129 YP_007227582.1 CDS B479_03615 NC_019905.1 829076 830371 R COG1252 NADH dehydrogenase, FAD-containing subunit; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(829076..830371) Pseudomonas putida HB3267 14291717 YP_007227583.1 CDS B479_03620 NC_019905.1 830456 830629 R hypothetical protein complement(830456..830629) Pseudomonas putida HB3267 14287131 YP_007227584.1 CDS B479_03625 NC_019905.1 830763 831392 R hypothetical protein complement(830763..831392) Pseudomonas putida HB3267 14287132 YP_007227585.1 CDS B479_03630 NC_019905.1 831448 831879 R hypothetical protein complement(831448..831879) Pseudomonas putida HB3267 14287133 YP_007227586.1 CDS B479_03635 NC_019905.1 831990 832673 D COG3235 Predicted membrane protein; hypothetical protein 831990..832673 Pseudomonas putida HB3267 14287134 YP_007227587.1 CDS B479_03640 NC_019905.1 833042 833242 R COG3024 Uncharacterized protein conserved in bacteria; DNA gyrase inhibitor complement(833042..833242) Pseudomonas putida HB3267 14287135 YP_007227588.1 CDS coaE NC_019905.1 833239 833862 R COG0237 Dephospho-CoA kinase; dephospho-CoA kinase complement(833239..833862) Pseudomonas putida HB3267 14287136 YP_007227589.1 CDS B479_03650 NC_019905.1 833862 834728 R COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases; prepilin peptidase complement(833862..834728) Pseudomonas putida HB3267 14287137 YP_007227590.1 CDS B479_03655 NC_019905.1 834731 835939 R COG1459 Type II secretory pathway, component PulF; type II secretion system protein complement(834731..835939) Pseudomonas putida HB3267 14287138 YP_007227591.1 CDS B479_03660 NC_019905.1 836155 836565 D COG4969 Tfp pilus assembly protein, major pilin PilA; fimbrial protein pilin 836155..836565 Pseudomonas putida HB3267 14287139 YP_007227592.1 CDS B479_03665 NC_019905.1 838628 839608 D hypothetical protein 838628..839608 Pseudomonas putida HB3267 14291718 YP_007227593.1 CDS B479_03670 NC_019905.1 839983 841188 D hypothetical protein 839983..841188 Pseudomonas putida HB3267 14287141 YP_007227594.1 CDS B479_03675 NC_019905.1 841215 842438 D COG0270 Site-specific DNA methylase; C-5 cytosine-specific DNA methylase 841215..842438 Pseudomonas putida HB3267 14287142 YP_007227595.1 CDS B479_03680 NC_019905.1 843072 843515 D COG3791 Uncharacterized conserved protein; hypothetical protein 843072..843515 Pseudomonas putida HB3267 14287143 YP_007227596.1 CDS B479_03685 NC_019905.1 844126 844353 D hypothetical protein 844126..844353 Pseudomonas putida HB3267 14287144 YP_007227597.1 CDS B479_03690 NC_019905.1 845012 846550 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily drug efflux transporter complement(845012..846550) Pseudomonas putida HB3267 14287145 YP_007227598.1 CDS B479_03695 NC_019905.1 846660 847550 D COG0583 Transcriptional regulator; transcriptional regulator 846660..847550 Pseudomonas putida HB3267 14287146 YP_007227599.1 CDS B479_03700 NC_019905.1 847736 848989 R COG1055 Na+/H+ antiporter NhaD and related arsenite permeases; arsenical pump membrane protein complement(847736..848989) Pseudomonas putida HB3267 14287147 YP_007227600.1 CDS B479_03705 NC_019905.1 849066 849503 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(849066..849503) Pseudomonas putida HB3267 14287148 YP_007227601.1 CDS B479_03710 NC_019905.1 849601 850308 R COG0631 Serine/threonine protein phosphatase; hypothetical protein complement(849601..850308) Pseudomonas putida HB3267 14287149 YP_007227602.1 CDS B479_03715 NC_019905.1 850308 851015 R hypothetical protein complement(850308..851015) Pseudomonas putida HB3267 14287150 YP_007227603.1 CDS B479_03720 NC_019905.1 851012 851587 R hypothetical protein complement(851012..851587) Pseudomonas putida HB3267 14287151 YP_007227604.1 CDS B479_03725 NC_019905.1 851929 852858 D COG0039 Malate/lactate dehydrogenases; malate dehydrogenase 851929..852858 Pseudomonas putida HB3267 14287152 YP_007227605.1 CDS B479_03730 NC_019905.1 853016 853837 R COG0765 ABC-type amino acid transport system, permease component; polar amino acid ABC transporter inner membrane subunit complement(853016..853837) Pseudomonas putida HB3267 14287153 YP_007227606.1 CDS B479_03735 NC_019905.1 853834 854655 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter periplasmic amino acid-binding protein complement(853834..854655) Pseudomonas putida HB3267 14287154 YP_007227607.1 CDS B479_03740 NC_019905.1 854759 855658 D COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent); homocysteine S-methyltransferase family protein 854759..855658 Pseudomonas putida HB3267 14287155 YP_007227608.1 CDS B479_03745 NC_019905.1 855828 857099 D COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; cystathionine gamma-synthase 855828..857099 Pseudomonas putida HB3267 14287156 YP_007227609.1 CDS B479_03750 NC_019905.1 857300 858691 D COG0833 Amino acid transporters; amino acid transporter 857300..858691 Pseudomonas putida HB3267 14287157 YP_007227610.1 CDS B479_03755 NC_019905.1 858729 859613 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 858729..859613 Pseudomonas putida HB3267 14287158 YP_007227611.1 CDS B479_03760 NC_019905.1 859637 861025 D COG0498 Threonine synthase; threonine synthase 859637..861025 Pseudomonas putida HB3267 14287159 YP_007227612.1 CDS B479_03765 NC_019905.1 861022 861459 D COG1522 Transcriptional regulators; AsnC family transcriptional regulator 861022..861459 Pseudomonas putida HB3267 14287160 YP_007227613.1 CDS B479_03770 NC_019905.1 861669 862712 D COG0460 Homoserine dehydrogenase; homoserine dehydrogenase 861669..862712 Pseudomonas putida HB3267 14287161 YP_007227614.1 CDS B479_03775 NC_019905.1 862725 864143 D COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase 862725..864143 Pseudomonas putida HB3267 14287162 YP_007227615.1 CDS B479_03780 NC_019905.1 864158 864511 D COG0251 Putative translation initiation inhibitor, yjgF family; endoribonuclease L-PSP 864158..864511 Pseudomonas putida HB3267 14287163 YP_007227616.1 CDS B479_03785 NC_019905.1 864535 865488 R COG0798 Arsenite efflux pump ACR3 and related permeases; bile acid:sodium symporter family protein complement(864535..865488) Pseudomonas putida HB3267 14287164 YP_007227617.1 CDS glyA NC_019905.1 865682 866935 R COG0112 Glycine/serine hydroxymethyltransferase; serine hydroxymethyltransferase complement(865682..866935) Pseudomonas putida HB3267 14287165 YP_007227618.1 CDS B479_03795 NC_019905.1 867277 871056 R COG2199 FOG: GGDEF domain; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(867277..871056) Pseudomonas putida HB3267 14287166 YP_007227619.1 CDS B479_03800 NC_019905.1 871356 871757 D hypothetical protein 871356..871757 Pseudomonas putida HB3267 14287167 YP_007227620.1 CDS B479_03805 NC_019905.1 872049 873716 D COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein 872049..873716 Pseudomonas putida HB3267 14287168 YP_007227621.1 CDS B479_03810 NC_019905.1 874030 875370 D COG0334 Glutamate dehydrogenase/leucine dehydrogenase; glutamate dehydrogenase 874030..875370 Pseudomonas putida HB3267 14287169 YP_007227622.1 CDS B479_03815 NC_019905.1 875510 876007 R COG0782 Transcription elongation factor; GreA/GreB family elongation factor complement(875510..876007) Pseudomonas putida HB3267 14287170 YP_007227623.1 CDS B479_03820 NC_019905.1 876075 876431 R putative lipoprotein complement(876075..876431) Pseudomonas putida HB3267 14287171 YP_007227624.1 CDS B479_03825 NC_019905.1 876569 878422 R COG2308 Uncharacterized conserved protein; hypothetical protein complement(876569..878422) Pseudomonas putida HB3267 14287172 YP_007227625.1 CDS B479_03830 NC_019905.1 878497 878985 R hypothetical protein complement(878497..878985) Pseudomonas putida HB3267 14287173 YP_007227626.1 CDS B479_03835 NC_019905.1 879239 881677 D COG1067 Predicted ATP-dependent protease; putative ATP-dependent protease 879239..881677 Pseudomonas putida HB3267 14287174 YP_007227627.1 CDS B479_03840 NC_019905.1 881839 882177 D hypothetical protein 881839..882177 Pseudomonas putida HB3267 14287175 YP_007227628.1 CDS B479_03845 NC_019905.1 882330 882818 D COG2862 Predicted membrane protein; hypothetical protein 882330..882818 Pseudomonas putida HB3267 14287176 YP_007227629.1 CDS B479_03850 NC_019905.1 882977 883282 D hypothetical protein 882977..883282 Pseudomonas putida HB3267 14287177 YP_007227630.1 CDS B479_03855 NC_019905.1 883368 883985 D COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; FKBP-type peptidylprolyl isomerase 883368..883985 Pseudomonas putida HB3267 14287178 YP_007227631.1 CDS B479_03860 NC_019905.1 884104 884349 R hypothetical protein complement(884104..884349) Pseudomonas putida HB3267 14287179 YP_007227632.1 CDS B479_03865 NC_019905.1 884434 884775 R COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; alkylphosphonate utilization operon protein PhnA complement(884434..884775) Pseudomonas putida HB3267 14287180 YP_007227633.1 CDS B479_03870 NC_019905.1 884942 885910 R COG0142 Geranylgeranyl pyrophosphate synthase; polyprenyl synthetase complement(884942..885910) Pseudomonas putida HB3267 14287181 YP_007227634.1 CDS rplU NC_019905.1 886155 886469 D COG0261 Ribosomal protein L21; 50S ribosomal protein L21 886155..886469 Pseudomonas putida HB3267 14287182 YP_007227635.1 CDS rpmA NC_019905.1 886508 886765 D COG0211 Ribosomal protein L27; 50S ribosomal protein L27 886508..886765 Pseudomonas putida HB3267 14287183 YP_007227636.1 CDS obgE NC_019905.1 886955 888181 D COG0536 Predicted GTPase; GTPase CgtA 886955..888181 Pseudomonas putida HB3267 14287184 YP_007227637.1 CDS B479_03890 NC_019905.1 888267 889385 D COG0263 Glutamate 5-kinase; gamma-glutamyl kinase 888267..889385 Pseudomonas putida HB3267 14287185 YP_007227638.1 CDS B479_03895 NC_019905.1 889382 889843 D COG3045 Uncharacterized protein conserved in bacteria; CreA family protein 889382..889843 Pseudomonas putida HB3267 14287186 YP_007227639.1 CDS B479_03900 NC_019905.1 889983 892817 R COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); hypothetical protein complement(889983..892817) Pseudomonas putida HB3267 14287187 YP_007227640.1 CDS B479_03905 NC_019905.1 892814 893521 R COG3095 Uncharacterized protein involved in chromosome partitioning; hypothetical protein complement(892814..893521) Pseudomonas putida HB3267 14287188 YP_007227641.1 CDS B479_03910 NC_019905.1 893511 894800 R hypothetical protein complement(893511..894800) Pseudomonas putida HB3267 14287189 YP_007227642.1 CDS B479_03915 NC_019905.1 895086 895871 D hypothetical protein 895086..895871 Pseudomonas putida HB3267 14287190 YP_007227643.1 CDS B479_03920 NC_019905.1 895868 896323 D COG0456 Acetyltransferases; ribosomal-protein-alanine acetyltransferase 895868..896323 Pseudomonas putida HB3267 14287191 YP_007227644.1 CDS B479_03925 NC_019905.1 896340 897497 R hypothetical protein complement(896340..897497) Pseudomonas putida HB3267 14287192 YP_007227645.1 CDS B479_03930 NC_019905.1 897718 898146 D hypothetical protein 897718..898146 Pseudomonas putida HB3267 14287193 YP_007227646.1 CDS B479_03935 NC_019905.1 898086 899003 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(898086..899003) Pseudomonas putida HB3267 14287194 YP_007227647.1 CDS B479_03940 NC_019905.1 899229 899843 D COG1280 Putative threonine efflux protein; lysine exporter protein LysE/YggA 899229..899843 Pseudomonas putida HB3267 14287195 YP_007227648.1 CDS B479_03945 NC_019905.1 900098 900685 R COG3712 Fe2+-dicitrate sensor, membrane component; anti-FecI sigma factor FecR complement(900098..900685) Pseudomonas putida HB3267 14291719 YP_007227649.1 CDS B479_03950 NC_019905.1 900876 902090 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 900876..902090 Pseudomonas putida HB3267 14287197 YP_007227650.1 CDS B479_03955 NC_019905.1 902537 903715 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 902537..903715 Pseudomonas putida HB3267 14287198 YP_007227651.1 CDS B479_03960 NC_019905.1 903790 904416 D COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; DNA-3-methyladenine glycosylase II 903790..904416 Pseudomonas putida HB3267 14287199 YP_007227652.1 CDS B479_03965 NC_019905.1 904564 905616 D COG2169 Adenosine deaminase; methylated-DNA--protein-cysteine methyltransferase 904564..905616 Pseudomonas putida HB3267 14287200 YP_007227653.1 CDS B479_03970 NC_019905.1 905673 908084 D COG3264 Small-conductance mechanosensitive channel; mechanosensitive ion channel protein MscS 905673..908084 Pseudomonas putida HB3267 14287201 YP_007227654.1 CDS B479_03975 NC_019905.1 908196 909413 R hypothetical protein complement(908196..909413) Pseudomonas putida HB3267 14287202 YP_007227655.1 CDS B479_03980 NC_019905.1 909767 911197 R COG1012 NAD-dependent aldehyde dehydrogenases; putative betaine-aldehyde dehydrogenase complement(909767..911197) Pseudomonas putida HB3267 14287203 YP_007227656.1 CDS B479_03985 NC_019905.1 911211 912710 R COG1457 Purine-cytosine permease and related proteins; NCS1 nucleoside transporter complement(911211..912710) Pseudomonas putida HB3267 14287204 YP_007227657.1 CDS B479_03990 NC_019905.1 912803 913192 R hypothetical protein complement(912803..913192) Pseudomonas putida HB3267 14287205 YP_007227658.1 CDS B479_03995 NC_019905.1 913372 914373 D COG3177 Uncharacterized conserved protein; hypothetical protein 913372..914373 Pseudomonas putida HB3267 14287206 YP_007227659.1 CDS B479_04000 NC_019905.1 914680 915699 D COG0598 Mg2+ and Co2+ transporters; Mg2 transporter protein CorA family protein 914680..915699 Pseudomonas putida HB3267 14287207 YP_007227660.1 CDS B479_04005 NC_019905.1 915715 916569 R COG1126 ABC-type polar amino acid transport system, ATPase component; amino acid ABC transporter ATP-binding protein complement(915715..916569) Pseudomonas putida HB3267 14287208 YP_007227661.1 CDS B479_04010 NC_019905.1 916569 917225 R COG0765 ABC-type amino acid transport system, permease component; amino acid ABC transporter permease complement(916569..917225) Pseudomonas putida HB3267 14287209 YP_007227662.1 CDS B479_04015 NC_019905.1 917222 917881 R COG0765 ABC-type amino acid transport system, permease component; amino acid ABC transporter permease complement(917222..917881) Pseudomonas putida HB3267 14287210 YP_007227663.1 CDS B479_04020 NC_019905.1 917944 918798 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter periplasmic amino acid-binding protein complement(917944..918798) Pseudomonas putida HB3267 14287211 YP_007227664.1 CDS B479_04025 NC_019905.1 919035 920432 D COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; GntR family transcriptional regulator 919035..920432 Pseudomonas putida HB3267 14287212 YP_007227665.1 CDS B479_04030 NC_019905.1 920647 921618 D COG1171 Threonine dehydratase; EutB ectoine utilization protein 920647..921618 Pseudomonas putida HB3267 14287213 YP_007227666.1 CDS B479_04035 NC_019905.1 921649 922641 D COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog; ectoine utilization protein EutC 921649..922641 Pseudomonas putida HB3267 14287214 YP_007227667.1 CDS B479_04040 NC_019905.1 922678 923868 D COG0006 Xaa-Pro aminopeptidase; EutD ectoine utilization protein 922678..923868 Pseudomonas putida HB3267 14287215 YP_007227668.1 CDS B479_04045 NC_019905.1 923872 924891 D COG3608 Predicted deacylase; EutE ectoine utilization protein 923872..924891 Pseudomonas putida HB3267 14287216 YP_007227669.1 CDS B479_04050 NC_019905.1 924928 926394 D COG1012 NAD-dependent aldehyde dehydrogenases; succinate-semialdehyde dehydrogenase 924928..926394 Pseudomonas putida HB3267 14287217 YP_007227670.1 CDS B479_04055 NC_019905.1 926407 927792 D COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; hypothetical protein 926407..927792 Pseudomonas putida HB3267 14287218 YP_007227671.1 CDS B479_04060 NC_019905.1 927918 928538 D COG1335 Amidases related to nicotinamidase; isochorismatase superfamily hydrolase 927918..928538 Pseudomonas putida HB3267 14287219 YP_007227672.1 CDS B479_04065 NC_019905.1 928724 929542 D COG2326 Uncharacterized conserved protein; hypothetical protein 928724..929542 Pseudomonas putida HB3267 14287220 YP_007227673.1 CDS B479_04070 NC_019905.1 929578 930774 D COG0475 Kef-type K+ transport systems, membrane components; potassium efflux system protein 929578..930774 Pseudomonas putida HB3267 14287221 YP_007227674.1 CDS B479_04075 NC_019905.1 930814 931911 D COG0628 Predicted permease; permease 930814..931911 Pseudomonas putida HB3267 14287222 YP_007227675.1 CDS B479_04080 NC_019905.1 931925 933445 D COG1538 Outer membrane protein; RND efflux system outer membrane lipoprotein 931925..933445 Pseudomonas putida HB3267 14287223 YP_007227676.1 CDS B479_04085 NC_019905.1 933442 934539 D COG1566 Multidrug resistance efflux pump; secretion protein HlyD family protein 933442..934539 Pseudomonas putida HB3267 14287224 YP_007227677.1 CDS B479_04090 NC_019905.1 934529 935551 D hypothetical protein 934529..935551 Pseudomonas putida HB3267 14287225 YP_007227678.1 CDS B479_04095 NC_019905.1 935641 937353 R COG0659 Sulfate permease and related transporters (MFS superfamily); sulfate transporter complement(935641..937353) Pseudomonas putida HB3267 14287226 YP_007227679.1 CDS B479_04100 NC_019905.1 937648 938748 R COG0012 Predicted GTPase, probable translation factor; GTP-binding protein YchF complement(937648..938748) Pseudomonas putida HB3267 14287227 YP_007227680.1 CDS B479_04105 NC_019905.1 938773 939357 R COG0193 Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase complement(938773..939357) Pseudomonas putida HB3267 14287228 YP_007227681.1 CDS B479_04110 NC_019905.1 939437 940030 R COG1825 Ribosomal protein L25 (general stress protein Ctc); 50S ribosomal protein L25/general stress protein Ctc complement(939437..940030) Pseudomonas putida HB3267 14287229 YP_007227682.1 CDS B479_04115 NC_019905.1 940152 941093 R COG0462 Phosphoribosylpyrophosphate synthetase; ribose-phosphate pyrophosphokinase complement(940152..941093) Pseudomonas putida HB3267 14287230 YP_007227683.1 CDS ipk NC_019905.1 941236 942096 R COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(941236..942096) Pseudomonas putida HB3267 14291720 YP_007227684.1 CDS lolB NC_019905.1 942100 942717 R COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis; outer membrane lipoprotein LolB complement(942100..942717) Pseudomonas putida HB3267 14287232 YP_007227685.1 CDS B479_04130 NC_019905.1 942722 944443 R COG0457 FOG: TPR repeat; hypothetical protein complement(942722..944443) Pseudomonas putida HB3267 14287233 YP_007227686.1 CDS B479_04135 NC_019905.1 945593 945817 D hypothetical protein 945593..945817 Pseudomonas putida HB3267 14287234 YP_007227687.1 CDS B479_04140 NC_019905.1 945877 946236 R hypothetical protein complement(945877..946236) Pseudomonas putida HB3267 14287235 YP_007227688.1 CDS B479_04145 NC_019905.1 946233 947210 R hypothetical protein complement(946233..947210) Pseudomonas putida HB3267 14287236 YP_007227689.1 CDS B479_04150 NC_019905.1 947220 947708 R COG3157 Hemolysin-coregulated protein (uncharacterized); Hcp1 family type VI secretion system effector complement(947220..947708) Pseudomonas putida HB3267 14287237 YP_007227690.1 CDS hemA NC_019905.1 948264 949541 D COG0373 Glutamyl-tRNA reductase; glutamyl-tRNA reductase 948264..949541 Pseudomonas putida HB3267 14287238 YP_007227691.1 CDS prfA NC_019905.1 949538 950620 D COG0216 Protein chain release factor A; peptide chain release factor 1 949538..950620 Pseudomonas putida HB3267 14287239 YP_007227692.1 CDS B479_04165 NC_019905.1 950620 951450 D COG2890 Methylase of polypeptide chain release factors; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 950620..951450 Pseudomonas putida HB3267 14287240 YP_007227693.1 CDS B479_04170 NC_019905.1 951444 952199 D COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2; molybdopterin biosynthesis protein MoeB 951444..952199 Pseudomonas putida HB3267 14287241 YP_007227694.1 CDS B479_04175 NC_019905.1 952192 952989 D COG0796 Glutamate racemase; glutamate racemase 952192..952989 Pseudomonas putida HB3267 14287242 YP_007227695.1 CDS B479_04180 NC_019905.1 953091 953609 D hypothetical protein 953091..953609 Pseudomonas putida HB3267 14287243 YP_007227696.1 CDS B479_04185 NC_019905.1 953850 954431 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain dehydrogenase complement(953850..954431) Pseudomonas putida HB3267 14287244 YP_007227697.1 CDS B479_04190 NC_019905.1 954557 955999 R COG0415 Deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photolyase complement(954557..955999) Pseudomonas putida HB3267 14287245 YP_007227698.1 CDS B479_04195 NC_019905.1 955990 956889 R COG0789 Predicted transcriptional regulators; MerR family transcriptional regulator complement(955990..956889) Pseudomonas putida HB3267 14287246 YP_007227699.1 CDS B479_04200 NC_019905.1 956879 957847 R COG1683 Uncharacterized conserved protein; hypothetical protein complement(956879..957847) Pseudomonas putida HB3267 14287247 YP_007227700.1 CDS B479_04205 NC_019905.1 957948 958934 R COG3380 Predicted NAD/FAD-dependent oxidoreductase; FAD dependent oxidoreductase complement(957948..958934) Pseudomonas putida HB3267 14287248 YP_007227701.1 CDS B479_04210 NC_019905.1 959122 960027 D COG1090 Predicted nucleoside-diphosphate sugar epimerase; NAD-dependent epimerase/dehydratase 959122..960027 Pseudomonas putida HB3267 14287249 YP_007227702.1 CDS hemH NC_019905.1 960041 961054 D COG0276 Protoheme ferro-lyase (ferrochelatase); ferrochelatase 960041..961054 Pseudomonas putida HB3267 14287250 YP_007227703.1 CDS B479_04220 NC_019905.1 961187 962461 R COG2233 Xanthine/uracil permeases; uracil-xanthine permease complement(961187..962461) Pseudomonas putida HB3267 14287251 YP_007227704.1 CDS upp NC_019905.1 962464 963102 R COG0035 Uracil phosphoribosyltransferase; uracil phosphoribosyltransferase complement(962464..963102) Pseudomonas putida HB3267 14287252 YP_007227705.1 CDS B479_04230 NC_019905.1 963264 963821 D COG0634 Hypoxanthine-guanine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase 963264..963821 Pseudomonas putida HB3267 14287253 YP_007227706.1 CDS B479_04235 NC_019905.1 963824 964297 D hypothetical protein 963824..964297 Pseudomonas putida HB3267 14287254 YP_007227707.1 CDS B479_04240 NC_019905.1 964485 964955 D COG1469 Uncharacterized conserved protein; hypothetical protein 964485..964955 Pseudomonas putida HB3267 14287255 YP_007227708.1 CDS B479_04245 NC_019905.1 965024 965314 D hypothetical protein 965024..965314 Pseudomonas putida HB3267 14287256 YP_007227709.1 CDS B479_04250 NC_019905.1 965494 967002 R COG0579 Predicted dehydrogenase; malate:quinone oxidoreductase complement(965494..967002) Pseudomonas putida HB3267 14287257 YP_007227710.1 CDS B479_04255 NC_019905.1 967603 967836 R hypothetical protein complement(967603..967836) Pseudomonas putida HB3267 14287258 YP_007227711.1 CDS B479_04260 NC_019905.1 967982 968566 D lipoprotein 967982..968566 Pseudomonas putida HB3267 14287259 YP_007227712.1 CDS B479_04265 NC_019905.1 968764 969024 D hypothetical protein 968764..969024 Pseudomonas putida HB3267 14287260 YP_007227713.1 CDS B479_04270 NC_019905.1 969141 970310 R COG2937 Glycerol-3-phosphate O-acyltransferase; phospholipid/glycerol acyltransferase complement(969141..970310) Pseudomonas putida HB3267 14287261 YP_007227714.1 CDS B479_04275 NC_019905.1 970433 970615 D hypothetical protein 970433..970615 Pseudomonas putida HB3267 14287262 YP_007227715.1 CDS B479_04280 NC_019905.1 970615 970875 D hypothetical protein 970615..970875 Pseudomonas putida HB3267 14287263 YP_007227716.1 CDS B479_04285 NC_019905.1 970891 971511 D COG2135 Uncharacterized conserved protein; hypothetical protein 970891..971511 Pseudomonas putida HB3267 14287264 YP_007227717.1 CDS B479_04290 NC_019905.1 971691 972506 D COG0501 Zn-dependent protease with chaperone function; peptidase M48 Ste24p 971691..972506 Pseudomonas putida HB3267 14287265 YP_007227718.1 CDS B479_04295 NC_019905.1 972657 973241 R COG2119 Predicted membrane protein; hypothetical protein complement(972657..973241) Pseudomonas putida HB3267 14287266 YP_007227719.1 CDS B479_04300 NC_019905.1 973509 974507 R COG2813 16S RNA G1207 methylase RsmC; ribosomal RNA small subunit methyltransferase C complement(973509..974507) Pseudomonas putida HB3267 14287267 YP_007227720.1 CDS B479_04305 NC_019905.1 974562 975527 R COG1052 Lactate dehydrogenase and related dehydrogenases; glycerate dehydrogenase complement(974562..975527) Pseudomonas putida HB3267 14287268 YP_007227721.1 CDS B479_04310 NC_019905.1 975778 977460 D COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; long-chain-fatty-acid--CoA ligase 975778..977460 Pseudomonas putida HB3267 14287269 YP_007227722.1 CDS B479_04315 NC_019905.1 977792 979678 D hypothetical protein 977792..979678 Pseudomonas putida HB3267 14287270 YP_007227723.1 CDS B479_04320 NC_019905.1 979704 981068 D hypothetical protein 979704..981068 Pseudomonas putida HB3267 14287271 YP_007227724.1 CDS B479_04325 NC_019905.1 981422 984139 D COG2909 ATP-dependent transcriptional regulator; LuxR family transcriptional regulator 981422..984139 Pseudomonas putida HB3267 14287272 YP_007227725.1 CDS B479_04330 NC_019905.1 984299 985906 D COG0784 FOG: CheY-like receiver; response regulator/TPR domain-containing protein 984299..985906 Pseudomonas putida HB3267 14287273 YP_007227726.1 CDS B479_04335 NC_019905.1 985903 986595 D COG2205 Osmosensitive K+ channel histidine kinase; histidine kinase 985903..986595 Pseudomonas putida HB3267 14287274 YP_007227727.1 CDS B479_04340 NC_019905.1 986764 987042 D COG2336 Growth regulator; transcriptional regulator/antitoxin MazE 986764..987042 Pseudomonas putida HB3267 14287275 YP_007227728.1 CDS B479_04345 NC_019905.1 987039 987386 D COG2337 Growth inhibitor; toxin ChpB 987039..987386 Pseudomonas putida HB3267 14287276 YP_007227729.1 CDS B479_04350 NC_019905.1 987405 988049 D COG0491 Zn-dependent hydrolases, including glyoxylases; beta-lactamase domain-containing protein 987405..988049 Pseudomonas putida HB3267 14287277 YP_007227730.1 CDS B479_04355 NC_019905.1 988158 988868 D COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; OmpA/MotB domain-containing protein 988158..988868 Pseudomonas putida HB3267 14287278 YP_007227731.1 CDS B479_04360 NC_019905.1 989004 991091 R COG0857 BioD-like N-terminal domain of phosphotransacetylase; phosphate acetyltransferase complement(989004..991091) Pseudomonas putida HB3267 14287279 YP_007227732.1 CDS B479_04365 NC_019905.1 991123 991425 R hypothetical protein complement(991123..991425) Pseudomonas putida HB3267 14287280 YP_007227733.1 CDS B479_04370 NC_019905.1 991424 991909 D COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2; FKBP-type peptidylprolyl isomerase 991424..991909 Pseudomonas putida HB3267 14287281 YP_007227734.1 CDS B479_04375 NC_019905.1 992054 992536 D COG0386 Glutathione peroxidase; glutathione peroxidase 992054..992536 Pseudomonas putida HB3267 14287282 YP_007227735.1 CDS B479_04380 NC_019905.1 992665 993855 R COG0438 Glycosyltransferase; group 1 glycosyl transferase complement(992665..993855) Pseudomonas putida HB3267 14287283 YP_007227736.1 CDS B479_04385 NC_019905.1 994029 995345 D COG2202 FOG: PAS/PAC domain; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 994029..995345 Pseudomonas putida HB3267 14287284 YP_007227737.1 CDS B479_04390 NC_019905.1 995572 996918 D hypothetical protein 995572..996918 Pseudomonas putida HB3267 14287285 YP_007227738.1 CDS B479_04395 NC_019905.1 996937 997554 D COG5620 Uncharacterized conserved protein; hypothetical protein 996937..997554 Pseudomonas putida HB3267 14287286 YP_007227739.1 CDS B479_04400 NC_019905.1 997600 998328 R COG2981 Uncharacterized protein involved in cysteine biosynthesis; sulfate transport protein CysZ complement(997600..998328) Pseudomonas putida HB3267 14287287 YP_007227740.1 CDS B479_04405 NC_019905.1 998658 999620 D COG0492 Thioredoxin reductase; thioredoxin reductase 998658..999620 Pseudomonas putida HB3267 14287288 YP_007227741.1 CDS B479_04410 NC_019905.1 999684 1000532 R COG0157 Nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase complement(999684..1000532) Pseudomonas putida HB3267 14287289 YP_007227742.1 CDS B479_04415 NC_019905.1 1000775 1002934 D hypothetical protein 1000775..1002934 Pseudomonas putida HB3267 14287290 YP_007227743.1 CDS B479_04420 NC_019905.1 1003056 1003628 D COG3023 Negative regulator of beta-lactamase expression; N-acetyl-anhydromuranmyl-L-alanine amidase 1003056..1003628 Pseudomonas putida HB3267 14287291 YP_007227744.1 CDS B479_04425 NC_019905.1 1003625 1004455 D COG3725 Membrane protein required for beta-lactamase induction; signaling modulator of AmpD, AmpE 1003625..1004455 Pseudomonas putida HB3267 14287292 YP_007227745.1 CDS B479_04430 NC_019905.1 1004653 1005429 R COG0084 Mg-dependent DNase; TatD-related deoxyribonuclease complement(1004653..1005429) Pseudomonas putida HB3267 14287293 YP_007227746.1 CDS B479_04435 NC_019905.1 1005432 1006427 R COG1609 Transcriptional regulators; DNA-binding transcriptional regulator FruR complement(1005432..1006427) Pseudomonas putida HB3267 14287294 YP_007227747.1 CDS B479_04440 NC_019905.1 1006712 1009564 D COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain; mulitfunctional PTS system fructose-like transporter subunit IIA/phosphocarrier protein HPr/phosphoenolpyruvate-protein phosphotransferase 1006712..1009564 Pseudomonas putida HB3267 14287295 YP_007227748.1 CDS B479_04445 NC_019905.1 1009565 1010512 D COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); 1-phosphofructokinase 1009565..1010512 Pseudomonas putida HB3267 14287296 YP_007227749.1 CDS B479_04450 NC_019905.1 1010509 1012248 D COG1445 Phosphotransferase system fructose-specific component IIB; PTS system fructose-specific transporter subunits IIBC 1010509..1012248 Pseudomonas putida HB3267 14287297 YP_007227750.1 CDS B479_04455 NC_019905.1 1012370 1012591 R COG3530 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1012370..1012591) Pseudomonas putida HB3267 14287298 YP_007227751.1 CDS B479_04460 NC_019905.1 1012795 1013271 D hypothetical protein 1012795..1013271 Pseudomonas putida HB3267 14287299 YP_007227752.1 CDS B479_04465 NC_019905.1 1013268 1014758 R COG2199 FOG: GGDEF domain; diguanylate cyclase complement(1013268..1014758) Pseudomonas putida HB3267 14287300 YP_007227753.1 CDS B479_04470 NC_019905.1 1014981 1016315 R outer membrane porin complement(1014981..1016315) Pseudomonas putida HB3267 14287301 YP_007227754.1 CDS B479_04475 NC_019905.1 1016521 1016745 R hypothetical protein complement(1016521..1016745) Pseudomonas putida HB3267 14287302 YP_007227755.1 CDS B479_04480 NC_019905.1 1017013 1018416 R COG0642 Signal transduction histidine kinase; heavy metal sensor signal transduction histidine kinase complement(1017013..1018416) Pseudomonas putida HB3267 14287303 YP_007227756.1 CDS B479_04485 NC_019905.1 1018391 1019065 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component heavy metal response transcriptional regulator complement(1018391..1019065) Pseudomonas putida HB3267 14287304 YP_007227757.1 CDS B479_04490 NC_019905.1 1019075 1022167 R COG0841 Cation/multidrug efflux pump; acriflavin resistance protein complement(1019075..1022167) Pseudomonas putida HB3267 14287305 YP_007227758.1 CDS B479_04495 NC_019905.1 1022164 1023327 R COG0845 Membrane-fusion protein; RND family efflux transporter, MFP subunit complement(1022164..1023327) Pseudomonas putida HB3267 14287306 YP_007227759.1 CDS B479_04500 NC_019905.1 1023819 1024553 R COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein complement(1023819..1024553) Pseudomonas putida HB3267 14287307 YP_007227760.1 CDS B479_04505 NC_019905.1 1024550 1024861 R hypothetical protein complement(1024550..1024861) Pseudomonas putida HB3267 14287308 YP_007227761.1 CDS B479_04510 NC_019905.1 1024949 1025848 R COG0835 Chemotaxis signal transduction protein; response regulator receiver modulated CheW protein complement(1024949..1025848) Pseudomonas putida HB3267 14287309 YP_007227762.1 CDS B479_04515 NC_019905.1 1026038 1027591 R COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains; anaerobic nitric oxide reductase transcription regulator complement(1026038..1027591) Pseudomonas putida HB3267 14287310 YP_007227763.1 CDS B479_04520 NC_019905.1 1027746 1028924 D COG1017 Hemoglobin-like flavoprotein; bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2 1027746..1028924 Pseudomonas putida HB3267 14287311 YP_007227764.1 CDS B479_04525 NC_019905.1 1029461 1029967 D COG1495 Disulfide bond formation protein DsbB; disulfide bond formation protein B 1029461..1029967 Pseudomonas putida HB3267 14287312 YP_007227765.1 CDS B479_04530 NC_019905.1 1030527 1031471 D COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2; cytochrome o ubiquinol oxidase subunit II 1030527..1031471 Pseudomonas putida HB3267 14287313 YP_007227766.1 CDS B479_04535 NC_019905.1 1031475 1033493 D COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; cytochrome o ubiquinol oxidase subunit I 1031475..1033493 Pseudomonas putida HB3267 14287314 YP_007227767.1 CDS B479_04540 NC_019905.1 1033512 1034120 D COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3; cytochrome o ubiquinol oxidase subunit III 1033512..1034120 Pseudomonas putida HB3267 14287315 YP_007227768.1 CDS B479_04545 NC_019905.1 1034120 1034452 D COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4; cytochrome o ubiquinol oxidase subunit IV 1034120..1034452 Pseudomonas putida HB3267 14287316 YP_007227769.1 CDS B479_04550 NC_019905.1 1034464 1035351 D COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor); protoheme IX farnesyltransferase 1034464..1035351 Pseudomonas putida HB3267 14287317 YP_007227770.1 CDS B479_04555 NC_019905.1 1035628 1036836 D COG0436 Aspartate/tyrosine/aromatic aminotransferase; aminotransferase 1035628..1036836 Pseudomonas putida HB3267 14287318 YP_007227771.1 CDS B479_04560 NC_019905.1 1036968 1038095 D hypothetical protein 1036968..1038095 Pseudomonas putida HB3267 14287319 YP_007227772.1 CDS B479_04565 NC_019905.1 1038255 1038638 D COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein 1038255..1038638 Pseudomonas putida HB3267 14287320 YP_007227773.1 CDS B479_04570 NC_019905.1 1039024 1039278 D hypothetical protein 1039024..1039278 Pseudomonas putida HB3267 14287321 YP_007227774.1 CDS B479_04575 NC_019905.1 1039275 1039526 D hypothetical protein 1039275..1039526 Pseudomonas putida HB3267 14287322 YP_007227775.1 CDS B479_04580 NC_019905.1 1039723 1040286 D COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; N-acetyltransferase GCN5 1039723..1040286 Pseudomonas putida HB3267 14287323 YP_007227776.1 CDS B479_04585 NC_019905.1 1040299 1040838 D hypothetical protein 1040299..1040838 Pseudomonas putida HB3267 14287324 YP_007227777.1 CDS B479_04590 NC_019905.1 1040858 1041244 D COG3755 Uncharacterized protein conserved in bacteria; hypothetical protein 1040858..1041244 Pseudomonas putida HB3267 14287325 YP_007227778.1 CDS B479_04595 NC_019905.1 1041367 1042479 R COG2603 Predicted ATPase; tRNA 2-selenouridine synthase complement(1041367..1042479) Pseudomonas putida HB3267 14287326 YP_007227779.1 CDS B479_04600 NC_019905.1 1042479 1043513 R COG0709 Selenophosphate synthase; selenophosphate synthetase complement(1042479..1043513) Pseudomonas putida HB3267 14287327 YP_007227780.1 CDS B479_04605 NC_019905.1 1043641 1044495 D COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component; phosphonate ABC transporter periplasmic phosphonate-binding protein 1043641..1044495 Pseudomonas putida HB3267 14287328 YP_007227781.1 CDS B479_04610 NC_019905.1 1044516 1045310 D COG3638 ABC-type phosphate/phosphonate transport system, ATPase component; phosphonates import ATP-binding protein phnC 1044516..1045310 Pseudomonas putida HB3267 14287329 YP_007227782.1 CDS B479_04615 NC_019905.1 1045304 1046131 D COG3639 ABC-type phosphate/phosphonate transport system, permease component; binding-protein-dependent transport system inner membrane protein 1045304..1046131 Pseudomonas putida HB3267 14287330 YP_007227783.1 CDS B479_04620 NC_019905.1 1046128 1046895 D COG3639 ABC-type phosphate/phosphonate transport system, permease component; phosphonate ABC transporter permease 1046128..1046895 Pseudomonas putida HB3267 14287331 YP_007227784.1 CDS B479_04625 NC_019905.1 1047035 1047928 R COG3781 Predicted membrane protein; hypothetical protein complement(1047035..1047928) Pseudomonas putida HB3267 14287332 YP_007227785.1 CDS B479_04630 NC_019905.1 1048251 1048442 D COG3657 Uncharacterized protein conserved in bacteria; addiction module killer protein 1048251..1048442 Pseudomonas putida HB3267 14287333 YP_007227786.1 CDS B479_04635 NC_019905.1 1048475 1048864 D COG3636 Predicted transcriptional regulator; hypothetical protein 1048475..1048864 Pseudomonas putida HB3267 14287334 YP_007227787.1 CDS B479_04640 NC_019905.1 1048890 1049792 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; extracellular solute-binding protein complement(1048890..1049792) Pseudomonas putida HB3267 14287335 YP_007227788.1 CDS B479_04645 NC_019905.1 1049820 1051091 R COG0665 Glycine/D-amino acid oxidases (deaminating); D-amino-acid dehydrogenase complement(1049820..1051091) Pseudomonas putida HB3267 14287336 YP_007227789.1 CDS B479_04650 NC_019905.1 1051199 1052104 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 1051199..1052104 Pseudomonas putida HB3267 14287337 YP_007227790.1 CDS queA NC_019905.1 1052346 1053395 D COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1052346..1053395 Pseudomonas putida HB3267 14291721 YP_007227791.1 CDS tgt NC_019905.1 1053410 1054525 D COG0343 Queuine/archaeosine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 1053410..1054525 Pseudomonas putida HB3267 14287339 YP_007227792.1 CDS yajC NC_019905.1 1054568 1054903 D COG1862 Preprotein translocase subunit YajC; preprotein translocase subunit YajC 1054568..1054903 Pseudomonas putida HB3267 14287340 YP_007227793.1 CDS secD NC_019905.1 1054968 1056830 D COG0342 Preprotein translocase subunit SecD; preprotein translocase subunit SecD 1054968..1056830 Pseudomonas putida HB3267 14287341 YP_007227794.1 CDS secF NC_019905.1 1056841 1057749 D COG0341 Preprotein translocase subunit SecF; preprotein translocase subunit SecF 1056841..1057749 Pseudomonas putida HB3267 14287342 YP_007227795.1 CDS B479_04680 NC_019905.1 1057870 1058412 D COG3134 Predicted outer membrane lipoprotein; hypothetical protein 1057870..1058412 Pseudomonas putida HB3267 14287343 YP_007227796.1 CDS B479_04685 NC_019905.1 1058629 1059447 R COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; protein SuhB complement(1058629..1059447) Pseudomonas putida HB3267 14287344 YP_007227797.1 CDS B479_04690 NC_019905.1 1059599 1060354 D COG0565 rRNA methylase; RNA methyltransferase 1059599..1060354 Pseudomonas putida HB3267 14287345 YP_007227798.1 CDS B479_04695 NC_019905.1 1060358 1061143 D COG1045 Serine acetyltransferase; serine O-acetyltransferase 1060358..1061143 Pseudomonas putida HB3267 14287346 YP_007227799.1 CDS B479_04700 NC_019905.1 1061323 1061814 D COG1959 Predicted transcriptional regulator; BadM/Rrf2 family transcriptional regulator 1061323..1061814 Pseudomonas putida HB3267 14287347 YP_007227800.1 CDS B479_04705 NC_019905.1 1061861 1063075 D COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; cysteine desulfurase 1061861..1063075 Pseudomonas putida HB3267 14287348 YP_007227801.1 CDS B479_04710 NC_019905.1 1063122 1063508 D COG0822 NifU homolog involved in Fe-S cluster formation; scaffold protein 1063122..1063508 Pseudomonas putida HB3267 14287349 YP_007227802.1 CDS B479_04715 NC_019905.1 1063537 1063860 D COG0316 Uncharacterized conserved protein; iron-sulfur cluster assembly protein IscA 1063537..1063860 Pseudomonas putida HB3267 14287350 YP_007227803.1 CDS hscB NC_019905.1 1063869 1064390 D COG1076 DnaJ-domain-containing proteins 1; co-chaperone HscB 1063869..1064390 Pseudomonas putida HB3267 14287351 YP_007227804.1 CDS hscA NC_019905.1 1064433 1066295 D COG0443 Molecular chaperone; chaperone protein HscA 1064433..1066295 Pseudomonas putida HB3267 14287352 YP_007227805.1 CDS B479_04730 NC_019905.1 1066299 1066640 D COG0633 Ferredoxin; ferredoxin, 2Fe-2S type, ISC system 1066299..1066640 Pseudomonas putida HB3267 14287353 YP_007227806.1 CDS B479_04735 NC_019905.1 1066651 1066851 D COG2975 Uncharacterized protein conserved in bacteria; hypothetical protein 1066651..1066851 Pseudomonas putida HB3267 14287354 YP_007227807.1 CDS ndk NC_019905.1 1066941 1067372 D COG0105 Nucleoside diphosphate kinase; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase 1066941..1067372 Pseudomonas putida HB3267 14287355 YP_007227808.1 CDS B479_04745 NC_019905.1 1067406 1068542 D COG0820 Predicted Fe-S-cluster redox enzyme; radical SAM protein 1067406..1068542 Pseudomonas putida HB3267 14287356 YP_007227809.1 CDS B479_04750 NC_019905.1 1068557 1069318 D COG3063 Tfp pilus assembly protein PilF; type IV pilus biogenesis/stability protein PilW 1068557..1069318 Pseudomonas putida HB3267 14287357 YP_007227810.1 CDS B479_04755 NC_019905.1 1069315 1070358 D COG1426 Uncharacterized protein conserved in bacteria; XRE family transcriptional regulator 1069315..1070358 Pseudomonas putida HB3267 14287358 YP_007227811.1 CDS ispG NC_019905.1 1070361 1071470 D COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1070361..1071470 Pseudomonas putida HB3267 14287359 YP_007227812.1 CDS hisS NC_019905.1 1071496 1072785 D COG0124 Histidyl-tRNA synthetase; histidyl-tRNA ligase 1071496..1072785 Pseudomonas putida HB3267 14287360 YP_007227813.1 CDS B479_04770 NC_019905.1 1072825 1073463 D COG2976 Uncharacterized protein conserved in bacteria; hypothetical protein 1072825..1073463 Pseudomonas putida HB3267 14287361 YP_007227814.1 CDS B479_04775 NC_019905.1 1073464 1074606 D COG1520 FOG: WD40-like repeat; outer membrane assembly lipoprotein YfgL 1073464..1074606 Pseudomonas putida HB3267 14287362 YP_007227815.1 CDS B479_04780 NC_019905.1 1074724 1076187 D COG1160 Predicted GTPases; GTP-binding protein Der 1074724..1076187 Pseudomonas putida HB3267 14287363 YP_007227816.1 CDS B479_04785 NC_019905.1 1076997 1077365 D hypothetical protein 1076997..1077365 Pseudomonas putida HB3267 14287364 YP_007227817.1 CDS B479_04790 NC_019905.1 1077603 1078751 D COG0436 Aspartate/tyrosine/aromatic aminotransferase; methionine aminotransferase 1077603..1078751 Pseudomonas putida HB3267 14287365 YP_007227818.1 CDS B479_04795 NC_019905.1 1078739 1079530 D COG0388 Predicted amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1078739..1079530 Pseudomonas putida HB3267 14287366 YP_007227819.1 CDS B479_04800 NC_019905.1 1079708 1082260 R COG3182 Uncharacterized iron-regulated membrane protein; flavodoxin/nitric oxide synthase complement(1079708..1082260) Pseudomonas putida HB3267 14287367 YP_007227820.1 CDS B479_04805 NC_019905.1 1082464 1084776 R COG4774 Outer membrane receptor for monomeric catechols; TonB-dependent siderophore receptor complement(1082464..1084776) Pseudomonas putida HB3267 14287368 YP_007227821.1 CDS B479_04810 NC_019905.1 1084999 1085679 D COG3128 Uncharacterized iron-regulated protein; Fe(II)-dependent oxygenase superfamily protein 1084999..1085679 Pseudomonas putida HB3267 14287369 YP_007227822.1 CDS B479_04815 NC_019905.1 1085719 1086432 D COG0790 FOG: TPR repeat, SEL1 subfamily; Sel1 domain-containing protein 1085719..1086432 Pseudomonas putida HB3267 14287370 YP_007227823.1 CDS B479_04820 NC_019905.1 1086607 1087770 R COG0019 Diaminopimelate decarboxylase; ornithine decarboxylase complement(1086607..1087770) Pseudomonas putida HB3267 14287371 YP_007227824.1 CDS B479_04825 NC_019905.1 1088265 1088762 D COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; ECF subfamily RNA polymerase sigma-24 factor 1088265..1088762 Pseudomonas putida HB3267 14287372 YP_007227825.1 CDS B479_04830 NC_019905.1 1088783 1089745 D COG3712 Fe2+-dicitrate sensor, membrane component; anti-FecI sigma factor FecR 1088783..1089745 Pseudomonas putida HB3267 14287373 YP_007227826.1 CDS B479_04835 NC_019905.1 1089854 1092283 D COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent siderophore receptor 1089854..1092283 Pseudomonas putida HB3267 14287374 YP_007227827.1 CDS B479_04840 NC_019905.1 1092475 1093632 R COG1125 ABC-type proline/glycine betaine transport systems, ATPase components; glycine betaine/L-proline ABC transporter ATPase complement(1092475..1093632) Pseudomonas putida HB3267 14287375 YP_007227828.1 CDS B479_04845 NC_019905.1 1093629 1094282 R COG1174 ABC-type proline/glycine betaine transport systems, permease component; binding-protein-dependent transport system inner membrane protein complement(1093629..1094282) Pseudomonas putida HB3267 14287376 YP_007227829.1 CDS B479_04850 NC_019905.1 1094279 1095193 R COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein); glycine betaine ABC transporter substrate-binding protein complement(1094279..1095193) Pseudomonas putida HB3267 14287377 YP_007227830.1 CDS B479_04855 NC_019905.1 1095207 1095920 R COG1174 ABC-type proline/glycine betaine transport systems, permease component; binding-protein-dependent transport system inner membrane protein complement(1095207..1095920) Pseudomonas putida HB3267 14287378 YP_007227831.1 CDS prfC NC_019905.1 1096480 1098063 D COG4108 Peptide chain release factor RF-3; peptide chain release factor 3 1096480..1098063 Pseudomonas putida HB3267 14287379 YP_007227832.1 CDS B479_04865 NC_019905.1 1098181 1099260 R COG0687 Spermidine/putrescine-binding periplasmic protein; extracellular solute-binding protein complement(1098181..1099260) Pseudomonas putida HB3267 14287380 YP_007227833.1 CDS B479_04870 NC_019905.1 1099313 1099654 R COG3450 Predicted enzyme of the cupin superfamily; hypothetical protein complement(1099313..1099654) Pseudomonas putida HB3267 14287381 YP_007227834.1 CDS B479_04875 NC_019905.1 1099689 1101095 R COG0665 Glycine/D-amino acid oxidases (deaminating); FAD dependent oxidoreductase complement(1099689..1101095) Pseudomonas putida HB3267 14287382 YP_007227835.1 CDS B479_04880 NC_019905.1 1101160 1101969 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(1101160..1101969) Pseudomonas putida HB3267 14287383 YP_007227836.1 CDS dppF NC_019905.1 1102342 1103310 R COG4608 ABC-type oligopeptide transport system, ATPase component; dipeptide transporter ATP-binding subunit complement(1102342..1103310) Pseudomonas putida HB3267 14287384 YP_007227837.1 CDS B479_04890 NC_019905.1 1103310 1104278 R COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; oligopeptide/dipeptide ABC transporter ATPase complement(1103310..1104278) Pseudomonas putida HB3267 14287385 YP_007227838.1 CDS B479_04895 NC_019905.1 1104289 1105215 R COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; binding-protein-dependent transport system inner membrane protein complement(1104289..1105215) Pseudomonas putida HB3267 14287386 YP_007227839.1 CDS B479_04900 NC_019905.1 1105226 1106236 R COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; alkaline phosphatase complement(1105226..1106236) Pseudomonas putida HB3267 14287387 YP_007227840.1 CDS B479_04905 NC_019905.1 1106328 1107923 R COG0747 ABC-type dipeptide transport system, periplasmic component; peptide ABC transporter substrate-binding protein complement(1106328..1107923) Pseudomonas putida HB3267 14287388 YP_007227841.1 CDS B479_04910 NC_019905.1 1108016 1109395 R outer membrane porin complement(1108016..1109395) Pseudomonas putida HB3267 14287389 YP_007227842.1 CDS B479_04915 NC_019905.1 1109620 1111212 R COG0747 ABC-type dipeptide transport system, periplasmic component; extracellular solute-binding protein complement(1109620..1111212) Pseudomonas putida HB3267 14287390 YP_007227843.1 CDS B479_04920 NC_019905.1 1111359 1112984 R COG0747 ABC-type dipeptide transport system, periplasmic component; extracellular solute-binding protein complement(1111359..1112984) Pseudomonas putida HB3267 14287391 YP_007227844.1 CDS B479_04925 NC_019905.1 1113377 1114093 R COG3471 Predicted periplasmic/secreted protein; hypothetical protein complement(1113377..1114093) Pseudomonas putida HB3267 14287392 YP_007227845.1 CDS B479_04930 NC_019905.1 1114296 1115552 D COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1114296..1115552 Pseudomonas putida HB3267 14287393 YP_007227846.1 CDS B479_04935 NC_019905.1 1115552 1116112 D COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain; two component Fis family transcriptional regulator 1115552..1116112 Pseudomonas putida HB3267 14287394 YP_007227847.1 CDS B479_04940 NC_019905.1 1116328 1117269 D COG0679 Predicted permeases; auxin efflux carrier 1116328..1117269 Pseudomonas putida HB3267 14287395 YP_007227848.1 CDS B479_04945 NC_019905.1 1117325 1118683 D COG1113 Gamma-aminobutyrate permease and related permeases; amino acid permease-associated protein 1117325..1118683 Pseudomonas putida HB3267 14287396 YP_007227849.1 CDS B479_04950 NC_019905.1 1118810 1119184 R COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit; carboxymuconolactone decarboxylase complement(1118810..1119184) Pseudomonas putida HB3267 14287397 YP_007227850.1 CDS B479_04955 NC_019905.1 1119195 1120220 R COG0530 Ca2+/Na+ antiporter; CaCA family Na+/Ca+ antiporter complement(1119195..1120220) Pseudomonas putida HB3267 14287398 YP_007227851.1 CDS B479_04960 NC_019905.1 1120299 1120673 R COG0797 Lipoproteins; rare lipoprotein A complement(1120299..1120673) Pseudomonas putida HB3267 14287399 YP_007227852.1 CDS gatB NC_019905.1 1120810 1122255 R COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); aspartyl/glutamyl-tRNA amidotransferase subunit B complement(1120810..1122255) Pseudomonas putida HB3267 14287400 YP_007227853.1 CDS gatA NC_019905.1 1122267 1123718 R COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(1122267..1123718) Pseudomonas putida HB3267 14287401 YP_007227854.1 CDS gatC NC_019905.1 1123734 1124021 R COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; asparaginyl/glutamyl-tRNA amidotransferase subunit C complement(1123734..1124021) Pseudomonas putida HB3267 14287402 YP_007227855.1 CDS B479_04980 NC_019905.1 1124227 1125264 D COG1077 Actin-like ATPase involved in cell morphogenesis; rod shape-determining protein MreB 1124227..1125264 Pseudomonas putida HB3267 14287403 YP_007227856.1 CDS B479_04985 NC_019905.1 1125491 1126495 D COG1792 Cell shape-determining protein; rod shape-determining protein MreC 1125491..1126495 Pseudomonas putida HB3267 14287404 YP_007227857.1 CDS B479_04990 NC_019905.1 1126495 1126983 D COG2891 Cell shape-determining protein; rod shape-determining protein MreD 1126495..1126983 Pseudomonas putida HB3267 14287405 YP_007227858.1 CDS B479_04995 NC_019905.1 1127017 1127628 D COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Maf-like protein 1127017..1127628 Pseudomonas putida HB3267 14287406 YP_007227859.1 CDS B479_05000 NC_019905.1 1127683 1129140 D COG1530 Ribonucleases G and E; cytoplasmic axial filament protein 1127683..1129140 Pseudomonas putida HB3267 14287407 YP_007227860.1 CDS B479_05005 NC_019905.1 1129229 1133056 D COG3164 Predicted membrane protein; hypothetical protein 1129229..1133056 Pseudomonas putida HB3267 14287408 YP_007227861.1 CDS B479_05010 NC_019905.1 1133065 1133916 D COG0388 Predicted amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1133065..1133916 Pseudomonas putida HB3267 14287409 YP_007227862.1 CDS B479_05015 NC_019905.1 1133919 1135358 D COG0312 Predicted Zn-dependent proteases and their inactivated homologs; peptidase U62 modulator of DNA gyrase 1133919..1135358 Pseudomonas putida HB3267 14287410 YP_007227863.1 CDS B479_05020 NC_019905.1 1135477 1135998 R COG3028 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1135477..1135998) Pseudomonas putida HB3267 14287411 YP_007227864.1 CDS B479_05025 NC_019905.1 1136107 1137453 D COG0312 Predicted Zn-dependent proteases and their inactivated homologs; C69 family peptidase 1136107..1137453 Pseudomonas putida HB3267 14287412 YP_007227865.1 CDS B479_05030 NC_019905.1 1137705 1138097 D hypothetical protein 1137705..1138097 Pseudomonas putida HB3267 14287413 YP_007227866.1 CDS fumC NC_019905.1 1138090 1139466 D COG0114 Fumarase; fumarate hydratase 1138090..1139466 Pseudomonas putida HB3267 14287414 YP_007227867.1 CDS B479_05040 NC_019905.1 1139542 1140153 D COG0605 Superoxide dismutase; superoxide dismutase 1139542..1140153 Pseudomonas putida HB3267 14287415 YP_007227868.1 CDS B479_05045 NC_019905.1 1140569 1140841 R COG1925 Phosphotransferase system, HPr-related proteins; phosphotransferase system, phosphocarrier protein HPr complement(1140569..1140841) Pseudomonas putida HB3267 14287416 YP_007227869.1 CDS B479_05050 NC_019905.1 1140861 1141715 R COG1660 Predicted P-loop-containing kinase; glmZ(sRNA)-inactivating NTPase complement(1140861..1141715) Pseudomonas putida HB3267 14287417 YP_007227870.1 CDS B479_05055 NC_019905.1 1141718 1142182 R COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN complement(1141718..1142182) Pseudomonas putida HB3267 14287418 YP_007227871.1 CDS B479_05060 NC_019905.1 1142195 1142503 R COG1544 Ribosome-associated protein Y (PSrp-1); RpoX complement(1142195..1142503) Pseudomonas putida HB3267 14287419 YP_007227872.1 CDS B479_05065 NC_019905.1 1142583 1144076 R COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; RNA polymerase factor sigma-54 complement(1142583..1144076) Pseudomonas putida HB3267 14287420 YP_007227873.1 CDS B479_05070 NC_019905.1 1144252 1144977 R COG1137 ABC-type (unclassified) transport system, ATPase component; ABC transporter ATP-binding protein complement(1144252..1144977) Pseudomonas putida HB3267 14287421 YP_007227874.1 CDS B479_05075 NC_019905.1 1144978 1145502 R COG1934 Uncharacterized protein conserved in bacteria; lipopolysaccharide transport periplasmic protein LptA complement(1144978..1145502) Pseudomonas putida HB3267 14287422 YP_007227875.1 CDS B479_05080 NC_019905.1 1145489 1146061 R COG3117 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1145489..1146061) Pseudomonas putida HB3267 14287423 YP_007227876.1 CDS B479_05085 NC_019905.1 1146070 1146594 R COG1778 Low specificity phosphatase (HAD superfamily); 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(1146070..1146594) Pseudomonas putida HB3267 14287424 YP_007227877.1 CDS B479_05090 NC_019905.1 1146607 1147581 R COG0794 Predicted sugar phosphate isomerase involved in capsule formation; KpsF/GutQ family protein complement(1146607..1147581) Pseudomonas putida HB3267 14287425 YP_007227878.1 CDS B479_05095 NC_019905.1 1147830 1148639 D COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component; toluene tolerance ABC efflux transporter ATP-binding protein 1147830..1148639 Pseudomonas putida HB3267 14287426 YP_007227879.1 CDS B479_05100 NC_019905.1 1148639 1149436 D COG0767 ABC-type transport system involved in resistance to organic solvents, permease component; hypothetical protein 1148639..1149436 Pseudomonas putida HB3267 14287427 YP_007227880.1 CDS B479_05105 NC_019905.1 1149436 1149921 D COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component; toluene tolerance protein Ttg2C 1149436..1149921 Pseudomonas putida HB3267 14287428 YP_007227881.1 CDS B479_05110 NC_019905.1 1149931 1150578 D COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component; toluene tolerance family protein 1149931..1150578 Pseudomonas putida HB3267 14287429 YP_007227882.1 CDS B479_05115 NC_019905.1 1150575 1150877 D COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); toluene tolerance protein Ttg2E 1150575..1150877 Pseudomonas putida HB3267 14287430 YP_007227883.1 CDS B479_05120 NC_019905.1 1150995 1151234 D COG5007 Predicted transcriptional regulator, BolA superfamily; Ttg2F 1150995..1151234 Pseudomonas putida HB3267 14287431 YP_007227884.1 CDS B479_05125 NC_019905.1 1151258 1152523 D COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1151258..1152523 Pseudomonas putida HB3267 14287432 YP_007227885.1 CDS hisG NC_019905.1 1152647 1153282 D COG0040 ATP phosphoribosyltransferase; ATP phosphoribosyltransferase catalytic subunit 1152647..1153282 Pseudomonas putida HB3267 14287433 YP_007227886.1 CDS hisD NC_019905.1 1153417 1154742 D COG0141 Histidinol dehydrogenase; bifunctional histidinal dehydrogenase/ histidinol dehydrogenase 1153417..1154742 Pseudomonas putida HB3267 14287434 YP_007227887.1 CDS B479_05140 NC_019905.1 1154745 1155791 D COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; histidinol-phosphate aminotransferase 1154745..1155791 Pseudomonas putida HB3267 14287435 YP_007227888.1 CDS B479_05145 NC_019905.1 1156033 1156683 D COG2186 Transcriptional regulators; GntR family transcriptional regulator 1156033..1156683 Pseudomonas putida HB3267 14287436 YP_007227889.1 CDS B479_05150 NC_019905.1 1156697 1157977 D COG2807 Cyanate permease; cyanate transporter 1156697..1157977 Pseudomonas putida HB3267 14287437 YP_007227890.1 CDS B479_05155 NC_019905.1 1158157 1158633 D COG3631 Ketosteroid isomerase-related protein; hypothetical protein 1158157..1158633 Pseudomonas putida HB3267 14287438 YP_007227891.1 CDS B479_05160 NC_019905.1 1158626 1158922 D COG2827 Predicted endonuclease containing a URI domain; GIY-YIG nuclease superfamily protein 1158626..1158922 Pseudomonas putida HB3267 14287439 YP_007227892.1 CDS B479_05165 NC_019905.1 1159045 1160052 R COG3081 Nucleoid-associated protein; nucleoid-associated protein NdpA complement(1159045..1160052) Pseudomonas putida HB3267 14287440 YP_007227893.1 CDS B479_05170 NC_019905.1 1160423 1160704 D COG0776 Bacterial nucleoid DNA-binding protein; histone family protein DNA-binding protein 1160423..1160704 Pseudomonas putida HB3267 14287441 YP_007227894.1 CDS B479_05175 NC_019905.1 1160755 1161708 R COG3129 Predicted SAM-dependent methyltransferase; 23S rRNA mA1618 methyltransferase complement(1160755..1161708) Pseudomonas putida HB3267 14287442 YP_007227895.1 CDS valS NC_019905.1 1161887 1164733 R COG0525 Valyl-tRNA synthetase; valyl-tRNA ligase complement(1161887..1164733) Pseudomonas putida HB3267 14287443 YP_007227896.1 CDS B479_05185 NC_019905.1 1164881 1165246 R hypothetical protein complement(1164881..1165246) Pseudomonas putida HB3267 14287444 YP_007227897.1 CDS B479_05190 NC_019905.1 1165252 1165683 R COG2927 DNA polymerase III, chi subunit; DNA polymerase III subunit chi complement(1165252..1165683) Pseudomonas putida HB3267 14287445 YP_007227898.1 CDS B479_05195 NC_019905.1 1165733 1167226 R COG0260 Leucyl aminopeptidase; multifunctional aminopeptidase A complement(1165733..1167226) Pseudomonas putida HB3267 14287446 YP_007227899.1 CDS B479_05200 NC_019905.1 1167241 1167531 D hypothetical protein 1167241..1167531 Pseudomonas putida HB3267 14287447 YP_007227900.1 CDS B479_05205 NC_019905.1 1167528 1168643 D COG0795 Predicted permeases; YjgP/YjgQ family permease 1167528..1168643 Pseudomonas putida HB3267 14287448 YP_007227901.1 CDS B479_05210 NC_019905.1 1168636 1169697 D COG0795 Predicted permeases; YjgP/YjgQ family permease 1168636..1169697 Pseudomonas putida HB3267 14287449 YP_007227902.1 CDS B479_05215 NC_019905.1 1169900 1170388 R COG1714 Predicted membrane protein/domain; RDD domain-containing protein complement(1169900..1170388) Pseudomonas putida HB3267 14287450 YP_007227903.1 CDS B479_05220 NC_019905.1 1170480 1170692 R COG1278 Cold shock proteins; cold-shock DNA-binding domain-containing protein complement(1170480..1170692) Pseudomonas putida HB3267 14287451 YP_007227904.1 CDS B479_05225 NC_019905.1 1171049 1172170 R COG0404 Glycine cleavage system T protein (aminomethyltransferase); glycine cleavage system T protein complement(1171049..1172170) Pseudomonas putida HB3267 14287452 YP_007227905.1 CDS B479_05230 NC_019905.1 1172198 1173574 R COG1760 L-serine deaminase; L-serine dehydratase complement(1172198..1173574) Pseudomonas putida HB3267 14287453 YP_007227906.1 CDS B479_05235 NC_019905.1 1173777 1176632 R COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain; glycine dehydrogenase complement(1173777..1176632) Pseudomonas putida HB3267 14287454 YP_007227907.1 CDS B479_05240 NC_019905.1 1176644 1177027 R COG0509 Glycine cleavage system H protein (lipoate-binding); glycine cleavage system protein H complement(1176644..1177027) Pseudomonas putida HB3267 14287455 YP_007227908.1 CDS B479_05245 NC_019905.1 1177368 1178429 R COG0451 Nucleoside-diphosphate-sugar epimerases; NAD-dependent epimerase/dehydratase complement(1177368..1178429) Pseudomonas putida HB3267 14287456 YP_007227909.1 CDS B479_05250 NC_019905.1 1178433 1178855 R hypothetical protein complement(1178433..1178855) Pseudomonas putida HB3267 14287457 YP_007227910.1 CDS B479_05255 NC_019905.1 1178974 1179876 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 1178974..1179876 Pseudomonas putida HB3267 14287458 YP_007227911.1 CDS B479_05260 NC_019905.1 1179893 1181089 R COG0786 Na+/glutamate symporter; sodium/glutamate symport carrier protein GltS complement(1179893..1181089) Pseudomonas putida HB3267 14287459 YP_007227912.1 CDS B479_05265 NC_019905.1 1181542 1183050 R COG3283 Transcriptional regulator of aromatic amino acids metabolism; sigma-54 dependent transcriptional regulator/sensory box protein complement(1181542..1183050) Pseudomonas putida HB3267 14287460 YP_007227913.1 CDS B479_05270 NC_019905.1 1183219 1183587 R hypothetical protein complement(1183219..1183587) Pseudomonas putida HB3267 14287461 YP_007227914.1 CDS B479_05275 NC_019905.1 1183643 1184572 R COG0549 Carbamate kinase; carbamate kinase complement(1183643..1184572) Pseudomonas putida HB3267 14287462 YP_007227915.1 CDS B479_05280 NC_019905.1 1184716 1185726 R COG0078 Ornithine carbamoyltransferase; ornithine carbamoyltransferase complement(1184716..1185726) Pseudomonas putida HB3267 14287463 YP_007227916.1 CDS B479_05285 NC_019905.1 1185796 1187049 R COG2235 Arginine deiminase; arginine deiminase complement(1185796..1187049) Pseudomonas putida HB3267 14287464 YP_007227917.1 CDS B479_05290 NC_019905.1 1187083 1188510 R COG0531 Amino acid transporters; arginine/ornithine antiporter complement(1187083..1188510) Pseudomonas putida HB3267 14287465 YP_007227918.1 CDS B479_05295 NC_019905.1 1188946 1190373 D COG0531 Amino acid transporters; arginine/ornithine antiporter 1188946..1190373 Pseudomonas putida HB3267 14287466 YP_007227919.1 CDS B479_05300 NC_019905.1 1190353 1190769 R COG2832 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1190353..1190769) Pseudomonas putida HB3267 14287467 YP_007227920.1 CDS B479_05305 NC_019905.1 1190826 1191419 R COG3230 Heme oxygenase; heme oxygenase complement(1190826..1191419) Pseudomonas putida HB3267 14287468 YP_007227921.1 CDS B479_05310 NC_019905.1 1191622 1194225 R COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent hemoglobin/transferrin/lactoferrin family receptor complement(1191622..1194225) Pseudomonas putida HB3267 14287469 YP_007227922.1 CDS B479_05315 NC_019905.1 1194503 1195465 R COG3712 Fe2+-dicitrate sensor, membrane component; anti-FecI sigma factor FecR complement(1194503..1195465) Pseudomonas putida HB3267 14287470 YP_007227923.1 CDS B479_05320 NC_019905.1 1195537 1196049 R COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; ECF subfamily RNA polymerase sigma-24 factor complement(1195537..1196049) Pseudomonas putida HB3267 14287471 YP_007227924.1 CDS B479_05325 NC_019905.1 1196295 1197296 R COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(1196295..1197296) Pseudomonas putida HB3267 14287472 YP_007227925.1 CDS B479_05330 NC_019905.1 1197562 1199388 D COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; phosphogluconate dehydratase 1197562..1199388 Pseudomonas putida HB3267 14287473 YP_007227926.1 CDS glk NC_019905.1 1199385 1200347 D COG0837 Glucokinase; glucokinase 1199385..1200347 Pseudomonas putida HB3267 14287474 YP_007227927.1 CDS B479_05340 NC_019905.1 1200515 1201240 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component transcriptional regulator 1200515..1201240 Pseudomonas putida HB3267 14287475 YP_007227928.1 CDS B479_05345 NC_019905.1 1201230 1202675 D COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1201230..1202675 Pseudomonas putida HB3267 14287476 YP_007227929.1 CDS B479_05350 NC_019905.1 1202916 1204166 D COG2942 N-acyl-D-glucosamine 2-epimerase; N-acylglucosamine 2-epimerase 1202916..1204166 Pseudomonas putida HB3267 14287477 YP_007227930.1 CDS B479_05355 NC_019905.1 1204271 1205623 D COG1653 ABC-type sugar transport system, periplasmic component; extracellular solute-binding protein 1204271..1205623 Pseudomonas putida HB3267 14287478 YP_007227931.1 CDS B479_05360 NC_019905.1 1205541 1206449 D COG1175 ABC-type sugar transport systems, permease components; binding-protein-dependent transport system inner membrane protein 1205541..1206449 Pseudomonas putida HB3267 14287479 YP_007227932.1 CDS B479_05365 NC_019905.1 1206442 1207287 D COG0395 ABC-type sugar transport system, permease component; binding-protein-dependent transport system inner membrane protein 1206442..1207287 Pseudomonas putida HB3267 14287480 YP_007227933.1 CDS B479_05370 NC_019905.1 1207291 1208445 D COG3839 ABC-type sugar transport systems, ATPase components; sugar ABC transporter ATP-binding protein 1207291..1208445 Pseudomonas putida HB3267 14287481 YP_007227934.1 CDS B479_05375 NC_019905.1 1208487 1209839 D COG3659 Carbohydrate-selective porin; carbohydrate-selective porin OprB 1208487..1209839 Pseudomonas putida HB3267 14287482 YP_007227935.1 CDS B479_05380 NC_019905.1 1209956 1210810 D COG0676 Uncharacterized enzymes related to aldose 1-epimerase; aldose 1-epimerase 1209956..1210810 Pseudomonas putida HB3267 14287483 YP_007227936.1 CDS B479_05385 NC_019905.1 1210803 1211675 R COG1737 Transcriptional regulators; DNA-binding transcriptional regulator HexR complement(1210803..1211675) Pseudomonas putida HB3267 14287484 YP_007227937.1 CDS B479_05390 NC_019905.1 1211878 1213347 D COG0364 Glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 1211878..1213347 Pseudomonas putida HB3267 14287485 YP_007227938.1 CDS B479_05395 NC_019905.1 1213334 1214047 D COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; 6-phosphogluconolactonase 1213334..1214047 Pseudomonas putida HB3267 14287486 YP_007227939.1 CDS B479_05400 NC_019905.1 1214065 1214745 D COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 1214065..1214745 Pseudomonas putida HB3267 14287487 YP_007227940.1 CDS B479_05405 NC_019905.1 1214987 1216660 R COG0119 Isopropylmalate/homocitrate/citramalate synthases; 2-isopropylmalate synthase complement(1214987..1216660) Pseudomonas putida HB3267 14287488 YP_007227941.1 CDS B479_05410 NC_019905.1 1217092 1217919 R COG0739 Membrane proteins related to metalloendopeptidases; peptidase M23B complement(1217092..1217919) Pseudomonas putida HB3267 14287489 YP_007227942.1 CDS xseA NC_019905.1 1217923 1219302 R COG1570 Exonuclease VII, large subunit; exodeoxyribonuclease VII large subunit complement(1217923..1219302) Pseudomonas putida HB3267 14287490 YP_007227943.1 CDS B479_05420 NC_019905.1 1219439 1220317 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(1219439..1220317) Pseudomonas putida HB3267 14287491 YP_007227944.1 CDS B479_05425 NC_019905.1 1220415 1221170 D COG0730 Predicted permeases; hypothetical protein 1220415..1221170 Pseudomonas putida HB3267 14287492 YP_007227945.1 CDS B479_05430 NC_019905.1 1221222 1221779 D hypothetical protein 1221222..1221779 Pseudomonas putida HB3267 14287493 YP_007227946.1 CDS B479_05435 NC_019905.1 1221866 1223335 D COG0516 IMP dehydrogenase/GMP reductase; inosine 5'-monophosphate dehydrogenase 1221866..1223335 Pseudomonas putida HB3267 14287494 YP_007227947.1 CDS guaA NC_019905.1 1223414 1224991 D COG0518 GMP synthase - Glutamine amidotransferase domain; GMP synthase 1223414..1224991 Pseudomonas putida HB3267 14287495 YP_007227948.1 CDS B479_05445 NC_019905.1 1225087 1226967 R COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; sulfatase complement(1225087..1226967) Pseudomonas putida HB3267 14287496 YP_007227949.1 CDS B479_05450 NC_019905.1 1227493 1228560 R COG1397 ADP-ribosylglycohydrolase; ADP-ribosyl-(dinitrogen reductase) hydrolase complement(1227493..1228560) Pseudomonas putida HB3267 14287497 YP_007227950.1 CDS B479_05455 NC_019905.1 1228557 1230032 R COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; hypothetical protein complement(1228557..1230032) Pseudomonas putida HB3267 14287498 YP_007227951.1 CDS B479_05460 NC_019905.1 1230370 1231752 D COG2132 Putative multicopper oxidases; multicopper oxidase type 3 1230370..1231752 Pseudomonas putida HB3267 14287499 YP_007227952.1 CDS B479_05465 NC_019905.1 1231752 1232231 D COG0590 Cytosine/adenosine deaminases; CMP/dCMP deaminase zinc-binding protein 1231752..1232231 Pseudomonas putida HB3267 14287500 YP_007227953.1 CDS B479_05470 NC_019905.1 1232342 1233799 R COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; membrane-bound lytic transglycosylase F complement(1232342..1233799) Pseudomonas putida HB3267 14287501 YP_007227954.1 CDS B479_05475 NC_019905.1 1234293 1238192 D COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain; phosphoribosylformylglycinamidine synthase 1234293..1238192 Pseudomonas putida HB3267 14287502 YP_007227955.1 CDS B479_05480 NC_019905.1 1238196 1238507 D COG3323 Uncharacterized protein conserved in bacteria; hypothetical protein 1238196..1238507 Pseudomonas putida HB3267 14287503 YP_007227956.1 CDS B479_05485 NC_019905.1 1238611 1239372 R COG0805 Sec-independent protein secretion pathway component TatC; Sec-independent protein translocase subunit TatC complement(1238611..1239372) Pseudomonas putida HB3267 14287504 YP_007227957.1 CDS B479_05490 NC_019905.1 1239369 1239674 R COG1826 Sec-independent protein secretion pathway components; twin-arginine translocation protein subunit TatB complement(1239369..1239674) Pseudomonas putida HB3267 14287505 YP_007227958.1 CDS B479_05495 NC_019905.1 1239674 1239907 R COG1826 Sec-independent protein secretion pathway components; twin arginine-targeting protein translocase complement(1239674..1239907) Pseudomonas putida HB3267 14287506 YP_007227959.1 CDS B479_05500 NC_019905.1 1240053 1241018 D COG3156 Type II secretory pathway, component PulK; general secretion pathway protein K 1240053..1241018 Pseudomonas putida HB3267 14287507 YP_007227960.1 CDS B479_05505 NC_019905.1 1242519 1244579 R COG3211 Predicted phosphatase; hypothetical protein complement(1242519..1244579) Pseudomonas putida HB3267 14287508 YP_007227961.1 CDS B479_05510 NC_019905.1 1244803 1246443 D COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; lipoprotein UxpA 1244803..1246443 Pseudomonas putida HB3267 14287509 YP_007227962.1 CDS B479_05515 NC_019905.1 1246443 1246865 D COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain; type II secretion protein C 1246443..1246865 Pseudomonas putida HB3267 14287510 YP_007227963.1 CDS B479_05520 NC_019905.1 1246887 1248632 D COG1450 Type II secretory pathway, component PulD; general secretion pathway protein D 1246887..1248632 Pseudomonas putida HB3267 14287511 YP_007227964.1 CDS B479_05525 NC_019905.1 1248632 1250080 D COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; type II secretion system protein E 1248632..1250080 Pseudomonas putida HB3267 14287512 YP_007227965.1 CDS B479_05530 NC_019905.1 1250084 1251286 D COG1459 Type II secretory pathway, component PulF; general secretion pathway protein F 1250084..1251286 Pseudomonas putida HB3267 14287513 YP_007227966.1 CDS B479_05535 NC_019905.1 1251304 1251738 D COG2165 Type II secretory pathway, pseudopilin PulG; general secretion pathway protein G 1251304..1251738 Pseudomonas putida HB3267 14287514 YP_007227967.1 CDS B479_05540 NC_019905.1 1251742 1252179 D COG2165 Type II secretory pathway, pseudopilin PulG; general secretion pathway protein H 1251742..1252179 Pseudomonas putida HB3267 14287515 YP_007227968.1 CDS B479_05545 NC_019905.1 1252176 1252544 D type II secretion system protein I/J 1252176..1252544 Pseudomonas putida HB3267 14287516 YP_007227969.1 CDS B479_05550 NC_019905.1 1252616 1253287 D COG4966 Tfp pilus assembly protein PilW; type II secretion system protein J 1252616..1253287 Pseudomonas putida HB3267 14287517 YP_007227970.1 CDS B479_05555 NC_019905.1 1253284 1254360 D general secretion pathway protein L 1253284..1254360 Pseudomonas putida HB3267 14287518 YP_007227971.1 CDS B479_05560 NC_019905.1 1254357 1254743 D type II secretion system protein M 1254357..1254743 Pseudomonas putida HB3267 14287519 YP_007227972.1 CDS B479_05565 NC_019905.1 1254764 1255399 D type II secretion pathway protein GspN 1254764..1255399 Pseudomonas putida HB3267 14287520 YP_007227973.1 CDS B479_05570 NC_019905.1 1255647 1260173 R COG3210 Large exoproteins involved in heme utilization or adhesion; filamentous hemagglutinin outer membrane protein complement(1255647..1260173) Pseudomonas putida HB3267 14287521 YP_007227974.1 CDS B479_05575 NC_019905.1 1260201 1261883 R COG2831 Hemolysin activation/secretion protein; TPS family activation/secretion protein complement(1260201..1261883) Pseudomonas putida HB3267 14287522 YP_007227975.1 CDS B479_05580 NC_019905.1 1262044 1262598 R COG3034 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1262044..1262598) Pseudomonas putida HB3267 14287523 YP_007227976.1 CDS B479_05585 NC_019905.1 1262621 1263172 R COG1051 ADP-ribose pyrophosphatase; NUDIX hydrolase complement(1262621..1263172) Pseudomonas putida HB3267 14287524 YP_007227977.1 CDS B479_05590 NC_019905.1 1263297 1263896 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; NUDIX hydrolase 1263297..1263896 Pseudomonas putida HB3267 14287525 YP_007227978.1 CDS B479_05595 NC_019905.1 1263941 1264465 D COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily; transferase 1263941..1264465 Pseudomonas putida HB3267 14287526 YP_007227979.1 CDS B479_05600 NC_019905.1 1264458 1264652 D COG3313 Predicted Fe-S protein; hypothetical protein 1264458..1264652 Pseudomonas putida HB3267 14287527 YP_007227980.1 CDS B479_05605 NC_019905.1 1264835 1265302 D COG1738 Uncharacterized conserved protein; hypothetical protein 1264835..1265302 Pseudomonas putida HB3267 14287528 YP_007227981.1 CDS purT NC_019905.1 1265379 1266560 D COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase); phosphoribosylglycinamide formyltransferase 2 1265379..1266560 Pseudomonas putida HB3267 14287529 YP_007227982.1 CDS B479_05615 NC_019905.1 1266675 1267976 R COG0477 Permeases of the major facilitator superfamily; metabolite-proton symporter complement(1266675..1267976) Pseudomonas putida HB3267 14287530 YP_007227983.1 CDS B479_05620 NC_019905.1 1268252 1269457 R COG1253 Hemolysins and related proteins containing CBS domains; transporter-associated protein complement(1268252..1269457) Pseudomonas putida HB3267 14287531 YP_007227984.1 CDS B479_05625 NC_019905.1 1269467 1270276 R COG4137 ABC-type uncharacterized transport system, permease component; cytochrome c assembly protein complement(1269467..1270276) Pseudomonas putida HB3267 14287532 YP_007227985.1 CDS B479_05630 NC_019905.1 1270601 1271977 D COG0541 Signal recognition particle GTPase; signal recognition particle protein 1270601..1271977 Pseudomonas putida HB3267 14287533 YP_007227986.1 CDS rpsP NC_019905.1 1272237 1272488 D COG0228 Ribosomal protein S16; 30S ribosomal protein S16 1272237..1272488 Pseudomonas putida HB3267 14287534 YP_007227987.1 CDS rimM NC_019905.1 1272494 1273030 D COG0806 RimM protein, required for 16S rRNA processing; 16S rRNA-processing protein RimM 1272494..1273030 Pseudomonas putida HB3267 14287535 YP_007227988.1 CDS trmD NC_019905.1 1273034 1273786 D COG0336 tRNA-(guanine-N1)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase 1273034..1273786 Pseudomonas putida HB3267 14287536 YP_007227989.1 CDS rplS NC_019905.1 1273829 1274179 D COG0335 Ribosomal protein L19; 50S ribosomal protein L19 1273829..1274179 Pseudomonas putida HB3267 14287537 YP_007227990.1 CDS B479_05655 NC_019905.1 1274273 1274680 D COG1607 Acyl-CoA hydrolase; thioesterase superfamily protein 1274273..1274680 Pseudomonas putida HB3267 14287538 YP_007227991.1 CDS xerD NC_019905.1 1274913 1275809 D COG4974 Site-specific recombinase XerD; site-specific tyrosine recombinase XerD 1274913..1275809 Pseudomonas putida HB3267 14287539 YP_007227992.1 CDS B479_05665 NC_019905.1 1275963 1276706 D COG1651 Protein-disulfide isomerase; thiol:disulfide interchange protein DsbC 1275963..1276706 Pseudomonas putida HB3267 14287540 YP_007227993.1 CDS B479_05670 NC_019905.1 1276790 1278094 D COG0460 Homoserine dehydrogenase; homoserine dehydrogenase 1276790..1278094 Pseudomonas putida HB3267 14287541 YP_007227994.1 CDS B479_05675 NC_019905.1 1278153 1279562 D COG0498 Threonine synthase; threonine synthase 1278153..1279562 Pseudomonas putida HB3267 14287542 YP_007227995.1 CDS B479_05680 NC_019905.1 1279783 1280202 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; response regulator receiver protein 1279783..1280202 Pseudomonas putida HB3267 14287543 YP_007227996.1 CDS B479_05685 NC_019905.1 1280282 1280563 D hypothetical protein 1280282..1280563 Pseudomonas putida HB3267 14287544 YP_007227997.1 CDS B479_05690 NC_019905.1 1280849 1281721 R hypothetical protein complement(1280849..1281721) Pseudomonas putida HB3267 14287545 YP_007227998.1 CDS B479_05695 NC_019905.1 1281742 1282941 R COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F complement(1281742..1282941) Pseudomonas putida HB3267 14287546 YP_007227999.1 CDS B479_05700 NC_019905.1 1283075 1283617 D COG4681 Uncharacterized protein conserved in bacteria; YaeQ family protein 1283075..1283617 Pseudomonas putida HB3267 14287547 YP_007228000.1 CDS B479_05705 NC_019905.1 1283626 1285335 D COG0608 Single-stranded DNA-specific exonuclease; single-stranded-DNA-specific exonuclease RecJ 1283626..1285335 Pseudomonas putida HB3267 14287548 YP_007228001.1 CDS B479_05710 NC_019905.1 1286119 1287225 D COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; NADH:flavin oxidoreductase 1286119..1287225 Pseudomonas putida HB3267 14287549 YP_007228002.1 CDS B479_05715 NC_019905.1 1287585 1289009 R COG1012 NAD-dependent aldehyde dehydrogenases; gamma-aminobutyraldehyde dehydrogenase complement(1287585..1289009) Pseudomonas putida HB3267 14287550 YP_007228003.1 CDS B479_05720 NC_019905.1 1289027 1289833 R COG1177 ABC-type spermidine/putrescine transport system, permease component II; ABC transporter permease complement(1289027..1289833) Pseudomonas putida HB3267 14287551 YP_007228004.1 CDS B479_05725 NC_019905.1 1289823 1290734 R COG1176 ABC-type spermidine/putrescine transport system, permease component I; binding-protein-dependent transport system inner membrane protein complement(1289823..1290734) Pseudomonas putida HB3267 14287552 YP_007228005.1 CDS B479_05730 NC_019905.1 1290736 1291773 R COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; spermidine/putrescine ABC transporter ATPase complement(1290736..1291773) Pseudomonas putida HB3267 14287553 YP_007228006.1 CDS B479_05735 NC_019905.1 1291922 1293073 R COG0687 Spermidine/putrescine-binding periplasmic protein; extracellular solute-binding protein complement(1291922..1293073) Pseudomonas putida HB3267 14287554 YP_007228007.1 CDS B479_05740 NC_019905.1 1293292 1293984 D COG2979 Uncharacterized protein conserved in bacteria; hypothetical protein 1293292..1293984 Pseudomonas putida HB3267 14287555 YP_007228008.1 CDS B479_05745 NC_019905.1 1294241 1295863 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1294241..1295863 Pseudomonas putida HB3267 14287556 YP_007228009.1 CDS B479_05750 NC_019905.1 1295869 1296375 D COG0835 Chemotaxis signal transduction protein; CheW protein 1295869..1296375 Pseudomonas putida HB3267 14287557 YP_007228010.1 CDS B479_05755 NC_019905.1 1296372 1297646 D COG1352 Methylase of chemotaxis methyl-accepting proteins; CheR-like methyltransferase 1296372..1297646 Pseudomonas putida HB3267 14287558 YP_007228011.1 CDS B479_05760 NC_019905.1 1297658 1298305 D COG0835 Chemotaxis signal transduction protein; CheW protein 1297658..1298305 Pseudomonas putida HB3267 14287559 YP_007228012.1 CDS B479_05765 NC_019905.1 1298302 1300605 D COG0643 Chemotaxis protein histidine kinase and related kinases; CheA signal transduction histidine kinase 1298302..1300605 Pseudomonas putida HB3267 14287560 YP_007228013.1 CDS B479_05770 NC_019905.1 1300602 1301615 D COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; chemotaxis-specific methylesterase 1300602..1301615 Pseudomonas putida HB3267 14287561 YP_007228014.1 CDS B479_05775 NC_019905.1 1301667 1302671 D COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; response regulator receiver modulated diguanylate cyclase 1301667..1302671 Pseudomonas putida HB3267 14287562 YP_007228015.1 CDS B479_05780 NC_019905.1 1302783 1302857 D peptide chain release factor 2 1302783..1302857 Pseudomonas putida HB3267 14287563 YP_007228016.1 CDS B479_05785 NC_019905.1 1303132 1303878 D COG1186 Protein chain release factor B; peptide chain release factor 2 1303132..1303878 Pseudomonas putida HB3267 14287564 YP_007228017.1 CDS lysS NC_019905.1 1303971 1305473 D COG1190 Lysyl-tRNA synthetase (class II); lysyl-tRNA ligase 1303971..1305473 Pseudomonas putida HB3267 14287565 YP_007228018.1 CDS B479_05795 NC_019905.1 1305685 1306389 D COG3226 Uncharacterized protein conserved in bacteria; TetR family transcriptional regulator 1305685..1306389 Pseudomonas putida HB3267 14287566 YP_007228019.1 CDS B479_05800 NC_019905.1 1306419 1306967 D lipoprotein 1306419..1306967 Pseudomonas putida HB3267 14287567 YP_007228020.1 CDS B479_05805 NC_019905.1 1307107 1308384 D COG3930 Uncharacterized protein conserved in bacteria; hypothetical protein 1307107..1308384 Pseudomonas putida HB3267 14287568 YP_007228021.1 CDS B479_05810 NC_019905.1 1308410 1309279 D COG1073 Hydrolases of the alpha/beta superfamily; lipoprotein 1308410..1309279 Pseudomonas putida HB3267 14287569 YP_007228022.1 CDS B479_05815 NC_019905.1 1309276 1309602 D hypothetical protein 1309276..1309602 Pseudomonas putida HB3267 14287570 YP_007228023.1 CDS B479_05820 NC_019905.1 1309764 1310555 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; OmpA/MotB domain-containing protein complement(1309764..1310555) Pseudomonas putida HB3267 14287571 YP_007228024.1 CDS B479_05825 NC_019905.1 1310606 1311019 R hypothetical protein complement(1310606..1311019) Pseudomonas putida HB3267 14287572 YP_007228025.1 CDS B479_05830 NC_019905.1 1311279 1311620 R hypothetical protein complement(1311279..1311620) Pseudomonas putida HB3267 14287573 YP_007228026.1 CDS B479_05835 NC_019905.1 1311821 1314448 D COG2352 Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 1311821..1314448 Pseudomonas putida HB3267 14287574 YP_007228027.1 CDS adk NC_019905.1 1314706 1315356 D COG0563 Adenylate kinase and related kinases; adenylate kinase 1314706..1315356 Pseudomonas putida HB3267 14287575 YP_007228028.1 CDS B479_05845 NC_019905.1 1315663 1316337 D COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone; peptidase M22 glycoprotease 1315663..1316337 Pseudomonas putida HB3267 14287576 YP_007228029.1 CDS B479_05850 NC_019905.1 1316469 1316759 D hypothetical protein 1316469..1316759 Pseudomonas putida HB3267 14287577 YP_007228030.1 CDS B479_05855 NC_019905.1 1316763 1317632 D COG1801 Uncharacterized conserved protein; hypothetical protein 1316763..1317632 Pseudomonas putida HB3267 14287578 YP_007228031.1 CDS B479_05860 NC_019905.1 1317661 1318491 D COG2513 PEP phosphonomutase and related enzymes; putative carboxyvinyl-carboxyphosphonate phosphorylmutase 1317661..1318491 Pseudomonas putida HB3267 14287579 YP_007228032.1 CDS B479_05865 NC_019905.1 1318491 1319180 D COG3921 Uncharacterized protein conserved in bacteria; extensin family protein 1318491..1319180 Pseudomonas putida HB3267 14287580 YP_007228033.1 CDS B479_05870 NC_019905.1 1319193 1319813 R hypothetical protein complement(1319193..1319813) Pseudomonas putida HB3267 14287581 YP_007228034.1 CDS B479_05875 NC_019905.1 1319917 1320693 D COG0500 SAM-dependent methyltransferases; hypothetical protein 1319917..1320693 Pseudomonas putida HB3267 14287582 YP_007228035.1 CDS B479_05880 NC_019905.1 1320733 1321659 R COG3209 Rhs family protein; hypothetical protein complement(1320733..1321659) Pseudomonas putida HB3267 14287583 YP_007228036.1 CDS B479_05885 NC_019905.1 1321810 1322451 R COG1309 Transcriptional regulator; TetR family transcriptional regulator complement(1321810..1322451) Pseudomonas putida HB3267 14287584 YP_007228037.1 CDS B479_05890 NC_019905.1 1323197 1323535 D hypothetical protein 1323197..1323535 Pseudomonas putida HB3267 14287585 YP_007228038.1 CDS B479_05895 NC_019905.1 1323516 1323965 R hypothetical protein complement(1323516..1323965) Pseudomonas putida HB3267 14287586 YP_007228039.1 CDS B479_05900 NC_019905.1 1324338 1325438 D COG0845 Membrane-fusion protein; RND family efflux transporter, MFP subunit 1324338..1325438 Pseudomonas putida HB3267 14287587 YP_007228040.1 CDS B479_05905 NC_019905.1 1325445 1328510 D COG0841 Cation/multidrug efflux pump; acriflavin resistance protein 1325445..1328510 Pseudomonas putida HB3267 14287588 YP_007228041.1 CDS B479_05910 NC_019905.1 1328642 1329331 R hypothetical protein complement(1328642..1329331) Pseudomonas putida HB3267 14287589 YP_007228042.1 CDS B479_05915 NC_019905.1 1329365 1329763 R COG3126 Uncharacterized protein conserved in bacteria; lipoprotein complement(1329365..1329763) Pseudomonas putida HB3267 14287590 YP_007228043.1 CDS B479_05920 NC_019905.1 1329891 1330604 R hypothetical protein complement(1329891..1330604) Pseudomonas putida HB3267 14287591 YP_007228044.1 CDS B479_05925 NC_019905.1 1330644 1331009 R COG3126 Uncharacterized protein conserved in bacteria; putative lipoprotein complement(1330644..1331009) Pseudomonas putida HB3267 14287592 YP_007228045.1 CDS B479_05930 NC_019905.1 1331098 1333584 R COG2937 Glycerol-3-phosphate O-acyltransferase; glycerol-3-phosphate acyltransferase complement(1331098..1333584) Pseudomonas putida HB3267 14287593 YP_007228046.1 CDS B479_05935 NC_019905.1 1333816 1334025 D COG1278 Cold shock proteins; cold-shock DNA-binding domain-containing protein 1333816..1334025 Pseudomonas putida HB3267 14287594 YP_007228047.1 CDS B479_05940 NC_019905.1 1334148 1334522 R hypothetical protein complement(1334148..1334522) Pseudomonas putida HB3267 14287595 YP_007228048.1 CDS B479_05945 NC_019905.1 1334540 1335352 R COG0500 SAM-dependent methyltransferases; rRNA (guanine-N(1)-)-methyltransferase complement(1334540..1335352) Pseudomonas putida HB3267 14287596 YP_007228049.1 CDS B479_05950 NC_019905.1 1335352 1336503 R COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; succinyl-diaminopimelate desuccinylase complement(1335352..1336503) Pseudomonas putida HB3267 14287597 YP_007228050.1 CDS B479_05955 NC_019905.1 1336703 1339294 R COG5309 Exo-beta-1,3-glucanase; glycosyl transferase family protein complement(1336703..1339294) Pseudomonas putida HB3267 14287598 YP_007228051.1 CDS B479_05960 NC_019905.1 1339414 1340223 D COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1; UBA/THIF-type NAD/FAD binding protein 1339414..1340223 Pseudomonas putida HB3267 14287599 YP_007228052.1 CDS B479_05965 NC_019905.1 1340335 1340745 R COG2166 SufE protein probably involved in Fe-S center assembly; Fe-S metabolism associated SufE complement(1340335..1340745) Pseudomonas putida HB3267 14287600 YP_007228053.1 CDS B479_05970 NC_019905.1 1340742 1341947 R COG0520 Selenocysteine lyase; class V aminotransferase complement(1340742..1341947) Pseudomonas putida HB3267 14287601 YP_007228054.1 CDS B479_05975 NC_019905.1 1342068 1343102 R COG2171 Tetrahydrodipicolinate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(1342068..1343102) Pseudomonas putida HB3267 14287602 YP_007228055.1 CDS B479_05980 NC_019905.1 1343134 1343481 R COG1393 Arsenate reductase and related proteins, glutaredoxin family; oxidoreductase, FAD-binding protein complement(1343134..1343481) Pseudomonas putida HB3267 14287603 YP_007228056.1 CDS B479_05985 NC_019905.1 1343800 1344114 D COG2944 Predicted transcriptional regulator; virulence gene repressor 1343800..1344114 Pseudomonas putida HB3267 14287604 YP_007228057.1 CDS B479_05990 NC_019905.1 1344305 1345951 D COG0025 NhaP-type Na+/H+ and K+/H+ antiporters; Na+/H+ antiporter 1344305..1345951 Pseudomonas putida HB3267 14287605 YP_007228058.1 CDS B479_05995 NC_019905.1 1346103 1347299 R COG0436 Aspartate/tyrosine/aromatic aminotransferase; succinyldiaminopimelate transaminase complement(1346103..1347299) Pseudomonas putida HB3267 14287606 YP_007228059.1 CDS glnD NC_019905.1 1347330 1350032 R COG2844 UTP:GlnB (protein PII) uridylyltransferase; PII uridylyl-transferase complement(1347330..1350032) Pseudomonas putida HB3267 14287607 YP_007228060.1 CDS B479_06005 NC_019905.1 1350074 1350856 R COG0024 Methionine aminopeptidase; methionine aminopeptidase complement(1350074..1350856) Pseudomonas putida HB3267 14287608 YP_007228061.1 CDS rpsB NC_019905.1 1351203 1351940 D COG0052 Ribosomal protein S2; 30S ribosomal protein S2 1351203..1351940 Pseudomonas putida HB3267 14287609 YP_007228062.1 CDS tsf NC_019905.1 1352127 1352990 D COG0264 Translation elongation factor Ts; elongation factor Ts 1352127..1352990 Pseudomonas putida HB3267 14287610 YP_007228063.1 CDS pyrH NC_019905.1 1353171 1353914 D COG0528 Uridylate kinase; uridylate kinase 1353171..1353914 Pseudomonas putida HB3267 14287611 YP_007228064.1 CDS frr NC_019905.1 1353911 1354468 D COG0233 Ribosome recycling factor; ribosome recycling factor 1353911..1354468 Pseudomonas putida HB3267 14287612 YP_007228065.1 CDS B479_06030 NC_019905.1 1354484 1355239 D COG0020 Undecaprenyl pyrophosphate synthase; undecaprenyl diphosphate synthase 1354484..1355239 Pseudomonas putida HB3267 14287613 YP_007228066.1 CDS B479_06035 NC_019905.1 1355239 1356054 D COG0575 CDP-diglyceride synthetase; phosphatidate cytidylyltransferase 1355239..1356054 Pseudomonas putida HB3267 14287614 YP_007228067.1 CDS B479_06040 NC_019905.1 1356051 1357241 D COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1356051..1357241 Pseudomonas putida HB3267 14287615 YP_007228068.1 CDS B479_06045 NC_019905.1 1357313 1358665 D COG0750 Predicted membrane-associated Zn-dependent proteases 1; putative membrane-associated zinc metalloprotease 1357313..1358665 Pseudomonas putida HB3267 14287616 YP_007228069.1 CDS B479_06050 NC_019905.1 1358740 1361100 D COG4775 Outer membrane protein/protective antigen OMA87; surface antigen family outer membrane protein 1358740..1361100 Pseudomonas putida HB3267 14287617 YP_007228070.1 CDS B479_06055 NC_019905.1 1361145 1361648 D COG2825 Outer membrane protein; outer membrane chaperone Skp 1361145..1361648 Pseudomonas putida HB3267 14287618 YP_007228071.1 CDS lpxD NC_019905.1 1361650 1362705 D COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1361650..1362705 Pseudomonas putida HB3267 14287619 YP_007228072.1 CDS fabZ NC_019905.1 1362820 1363260 D COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; (3R)-hydroxymyristoyl-ACP dehydratase 1362820..1363260 Pseudomonas putida HB3267 14287620 YP_007228073.1 CDS B479_06070 NC_019905.1 1363257 1364033 D COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase; UDP-N-acetylglucosamine acyltransferase 1363257..1364033 Pseudomonas putida HB3267 14287621 YP_007228074.1 CDS lpxB NC_019905.1 1364035 1365162 D COG0763 Lipid A disaccharide synthetase; lipid-A-disaccharide synthase 1364035..1365162 Pseudomonas putida HB3267 14287622 YP_007228075.1 CDS rnhB NC_019905.1 1365164 1365787 D COG0164 Ribonuclease HII; ribonuclease HII 1365164..1365787 Pseudomonas putida HB3267 14287623 YP_007228076.1 CDS dnaE NC_019905.1 1365975 1369499 D COG0587 DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha 1365975..1369499 Pseudomonas putida HB3267 14287624 YP_007228077.1 CDS B479_06090 NC_019905.1 1369606 1370553 D COG0825 Acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1369606..1370553 Pseudomonas putida HB3267 14287625 YP_007228078.1 CDS B479_06095 NC_019905.1 1370692 1371975 D COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA(Ile)-lysidine synthetase 1370692..1371975 Pseudomonas putida HB3267 14287626 YP_007228079.1 CDS pyrG NC_019905.1 1372245 1373873 D COG0504 CTP synthase (UTP-ammonia lyase); CTP synthetase 1372245..1373873 Pseudomonas putida HB3267 14287627 YP_007228080.1 CDS B479_06105 NC_019905.1 1373877 1374722 D COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase 1373877..1374722 Pseudomonas putida HB3267 14287628 YP_007228081.1 CDS eno NC_019905.1 1374876 1376165 D COG0148 Enolase; enolase 1374876..1376165 Pseudomonas putida HB3267 14287629 YP_007228082.1 CDS B479_06115 NC_019905.1 1376334 1376615 D COG2919 Septum formation initiator; septum formation initiator 1376334..1376615 Pseudomonas putida HB3267 14287630 YP_007228083.1 CDS ispD NC_019905.1 1376612 1377319 D COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1376612..1377319 Pseudomonas putida HB3267 14287631 YP_007228084.1 CDS B479_06125 NC_019905.1 1377451 1378347 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(1377451..1378347) Pseudomonas putida HB3267 14287632 YP_007228085.1 CDS B479_06130 NC_019905.1 1378455 1379567 D COG1062 Zn-dependent alcohol dehydrogenases, class III; S-(hydroxymethyl)glutathione dehydrogenase 1378455..1379567 Pseudomonas putida HB3267 14287633 YP_007228086.1 CDS B479_06135 NC_019905.1 1379576 1380430 D COG0627 Predicted esterase; S-formylglutathione hydrolase 1379576..1380430 Pseudomonas putida HB3267 14287634 YP_007228087.1 CDS ispF NC_019905.1 1380632 1381105 D COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1380632..1381105 Pseudomonas putida HB3267 14287635 YP_007228088.1 CDS truD NC_019905.1 1381102 1382160 D COG0585 Uncharacterized conserved protein; tRNA pseudouridine synthase D 1381102..1382160 Pseudomonas putida HB3267 14287636 YP_007228089.1 CDS surE NC_019905.1 1382148 1382897 D COG0496 Predicted acid phosphatase; 5'(3')-nucleotidase/polyphosphatase 1382148..1382897 Pseudomonas putida HB3267 14287637 YP_007228090.1 CDS pcm NC_019905.1 1382933 1383571 D COG2518 Protein-L-isoaspartate carboxylmethyltransferase; protein-L-isoaspartate O-methyltransferase 1382933..1383571 Pseudomonas putida HB3267 14287638 YP_007228091.1 CDS B479_06160 NC_019905.1 1383792 1384649 D COG0739 Membrane proteins related to metalloendopeptidases; peptidase M23B 1383792..1384649 Pseudomonas putida HB3267 14287639 YP_007228092.1 CDS B479_06165 NC_019905.1 1384758 1385765 D COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase sigma factor RpoS 1384758..1385765 Pseudomonas putida HB3267 14287640 YP_007228093.1 CDS B479_06170 NC_019905.1 1386383 1386706 R COG1146 Ferredoxin; 4Fe-4S ferredoxin complement(1386383..1386706) Pseudomonas putida HB3267 14287641 YP_007228094.1 CDS B479_06175 NC_019905.1 1386847 1389432 R COG0249 Mismatch repair ATPase (MutS family); DNA mismatch repair protein MutS complement(1386847..1389432) Pseudomonas putida HB3267 14287642 YP_007228095.1 CDS B479_06180 NC_019905.1 1389722 1390375 D COG3306 Glycosyltransferase involved in LPS biosynthesis; hypothetical protein 1389722..1390375 Pseudomonas putida HB3267 14287643 YP_007228096.1 CDS B479_06185 NC_019905.1 1390571 1391053 D COG1546 Uncharacterized protein (competence- and mitomycin-induced); CinA domain-containing protein 1390571..1391053 Pseudomonas putida HB3267 14287644 YP_007228097.1 CDS recA NC_019905.1 1391157 1392224 D COG0468 RecA/RadA recombinase; recombinase A 1391157..1392224 Pseudomonas putida HB3267 14287645 YP_007228098.1 CDS recX NC_019905.1 1392246 1392716 D COG2137 Uncharacterized protein conserved in bacteria; recombination regulator RecX 1392246..1392716 Pseudomonas putida HB3267 14287646 YP_007228099.1 CDS B479_06200 NC_019905.1 1392766 1393884 R COG1611 Predicted Rossmann fold nucleotide-binding protein; hypothetical protein complement(1392766..1393884) Pseudomonas putida HB3267 14287647 YP_007228100.1 CDS B479_06205 NC_019905.1 1394047 1394256 D hypothetical protein 1394047..1394256 Pseudomonas putida HB3267 14287648 YP_007228101.1 CDS B479_06210 NC_019905.1 1394271 1394690 R hypothetical protein complement(1394271..1394690) Pseudomonas putida HB3267 14287649 YP_007228102.1 CDS B479_06215 NC_019905.1 1394911 1395621 D COG3148 Uncharacterized conserved protein; DTW domain-containing protein 1394911..1395621 Pseudomonas putida HB3267 14287650 YP_007228103.1 CDS B479_06220 NC_019905.1 1395700 1396350 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; two component LuxR family transcriptional regulator 1395700..1396350 Pseudomonas putida HB3267 14287651 YP_007228104.1 CDS B479_06225 NC_019905.1 1396424 1396789 D COG0818 Diacylglycerol kinase; diacylglycerol kinase 1396424..1396789 Pseudomonas putida HB3267 14287652 YP_007228105.1 CDS B479_06230 NC_019905.1 1396786 1397712 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(1396786..1397712) Pseudomonas putida HB3267 14287653 YP_007228106.1 CDS B479_06235 NC_019905.1 1397834 1398613 D COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; oxidoreductase FAD/NAD(P)-binding subunit 1397834..1398613 Pseudomonas putida HB3267 14287654 YP_007228107.1 CDS B479_06240 NC_019905.1 1398802 1399296 R COG3091 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1398802..1399296) Pseudomonas putida HB3267 14287655 YP_007228108.1 CDS B479_06245 NC_019905.1 1399429 1400028 R hypothetical protein complement(1399429..1400028) Pseudomonas putida HB3267 14287656 YP_007228109.1 CDS B479_06250 NC_019905.1 1400291 1401115 D COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA 2-thiocytidine biosynthesis protein TtcA 1400291..1401115 Pseudomonas putida HB3267 14287657 YP_007228110.1 CDS B479_06255 NC_019905.1 1401120 1401791 D COG2818 3-methyladenine DNA glycosylase; DNA-glycosylase 1401120..1401791 Pseudomonas putida HB3267 14287658 YP_007228111.1 CDS B479_06260 NC_019905.1 1401924 1402337 R COG3308 Predicted membrane protein; hypothetical protein complement(1401924..1402337) Pseudomonas putida HB3267 14287659 YP_007228112.1 CDS B479_06265 NC_019905.1 1402330 1402935 R COG0655 Multimeric flavodoxin WrbA; flavoprotein WrbA complement(1402330..1402935) Pseudomonas putida HB3267 14287660 YP_007228113.1 CDS B479_06270 NC_019905.1 1402932 1403285 R COG1393 Arsenate reductase and related proteins, glutaredoxin family; arsenate reductase complement(1402932..1403285) Pseudomonas putida HB3267 14287661 YP_007228114.1 CDS B479_06275 NC_019905.1 1403371 1403835 D COG0526 Thiol-disulfide isomerase and thioredoxins; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 1403371..1403835 Pseudomonas putida HB3267 14287662 YP_007228115.1 CDS B479_06280 NC_019905.1 1403953 1404357 R COG3187 Heat shock protein; putative lipoprotein complement(1403953..1404357) Pseudomonas putida HB3267 14287663 YP_007228116.1 CDS B479_06285 NC_019905.1 1404354 1404791 R hypothetical protein complement(1404354..1404791) Pseudomonas putida HB3267 14287664 YP_007228117.1 CDS B479_06290 NC_019905.1 1404823 1405812 R COG1052 Lactate dehydrogenase and related dehydrogenases; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(1404823..1405812) Pseudomonas putida HB3267 14287665 YP_007228118.1 CDS B479_06295 NC_019905.1 1405981 1408737 R COG0642 Signal transduction histidine kinase; multi-sensor hybrid histidine kinase complement(1405981..1408737) Pseudomonas putida HB3267 14287666 YP_007228119.1 CDS B479_06300 NC_019905.1 1408931 1409650 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component transcriptional regulator 1408931..1409650 Pseudomonas putida HB3267 14287667 YP_007228120.1 CDS B479_06305 NC_019905.1 1409654 1411036 D COG0642 Signal transduction histidine kinase; sensor histidine kinase 1409654..1411036 Pseudomonas putida HB3267 14287668 YP_007228121.1 CDS cysM NC_019905.1 1411280 1412173 D COG0031 Cysteine synthase; cysteine synthase B 1411280..1412173 Pseudomonas putida HB3267 14287669 YP_007228122.1 CDS rumA NC_019905.1 1412174 1413532 D COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; 23S rRNA m(5)U1939 methyltransferase 1412174..1413532 Pseudomonas putida HB3267 14287670 YP_007228123.1 CDS B479_06320 NC_019905.1 1413629 1415869 D COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; (p)ppGpp synthetase I SpoT/RelA 1413629..1415869 Pseudomonas putida HB3267 14287671 YP_007228124.1 CDS mazG NC_019905.1 1416015 1416848 D COG1694 Predicted pyrophosphatase; nucleoside triphosphate pyrophosphohydrolase 1416015..1416848 Pseudomonas putida HB3267 14287672 YP_007228125.1 CDS B479_06330 NC_019905.1 1416875 1417414 D COG3122 Uncharacterized protein conserved in bacteria; hypothetical protein 1416875..1417414 Pseudomonas putida HB3267 14287673 YP_007228126.1 CDS B479_06335 NC_019905.1 1417460 1417642 R COG0554 Glycerol kinase; hypothetical protein complement(1417460..1417642) Pseudomonas putida HB3267 14287674 YP_007228127.1 CDS B479_06340 NC_019905.1 1417880 1418590 R hypothetical protein complement(1417880..1418590) Pseudomonas putida HB3267 14287675 YP_007228128.1 CDS purN NC_019905.1 1418599 1419252 R COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; phosphoribosylglycinamide formyltransferase complement(1418599..1419252) Pseudomonas putida HB3267 14287676 YP_007228129.1 CDS B479_06350 NC_019905.1 1419252 1420310 R COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; phosphoribosylaminoimidazole synthetase complement(1419252..1420310) Pseudomonas putida HB3267 14287677 YP_007228130.1 CDS B479_06355 NC_019905.1 1420737 1421804 D COG3249 Uncharacterized protein conserved in bacteria; hypothetical protein 1420737..1421804 Pseudomonas putida HB3267 14287678 YP_007228131.1 CDS B479_06360 NC_019905.1 1421817 1422890 D COG0628 Predicted permease; hypothetical protein 1421817..1422890 Pseudomonas putida HB3267 14287679 YP_007228132.1 CDS B479_06365 NC_019905.1 1423185 1423892 D COG0593 ATPase involved in DNA replication initiation; DNA replication initiation factor 1423185..1423892 Pseudomonas putida HB3267 14287680 YP_007228133.1 CDS B479_06370 NC_019905.1 1424018 1424671 D COG0791 Cell wall-associated hydrolases (invasion-associated proteins); NLP/P60 protein 1424018..1424671 Pseudomonas putida HB3267 14287681 YP_007228134.1 CDS B479_06375 NC_019905.1 1424811 1425344 D COG0791 Cell wall-associated hydrolases (invasion-associated proteins); NLP/P60 protein 1424811..1425344 Pseudomonas putida HB3267 14287682 YP_007228135.1 CDS B479_06380 NC_019905.1 1425310 1426656 R COG2133 Glucose/sorbosone dehydrogenases; L-sorbosone dehydrogenase complement(1425310..1426656) Pseudomonas putida HB3267 14287683 YP_007228136.1 CDS B479_06385 NC_019905.1 1426827 1427024 R hypothetical protein complement(1426827..1427024) Pseudomonas putida HB3267 14287684 YP_007228137.1 CDS B479_06390 NC_019905.1 1427291 1427869 R hypothetical protein complement(1427291..1427869) Pseudomonas putida HB3267 14287685 YP_007228138.1 CDS B479_06395 NC_019905.1 1428377 1428988 D COG2109 ATP:corrinoid adenosyltransferase; cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase 1428377..1428988 Pseudomonas putida HB3267 14287686 YP_007228139.1 CDS B479_06400 NC_019905.1 1428985 1430280 D COG1797 Cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 1428985..1430280 Pseudomonas putida HB3267 14287687 YP_007228140.1 CDS B479_06405 NC_019905.1 1430277 1430927 D COG0778 Nitroreductase; cob(II)yrinic acid a,c-diamide reductase 1430277..1430927 Pseudomonas putida HB3267 14287688 YP_007228141.1 CDS B479_06410 NC_019905.1 1430924 1431832 D COG1270 Cobalamin biosynthesis protein CobD/CbiB; cobalamin biosynthesis protein 1430924..1431832 Pseudomonas putida HB3267 14287689 YP_007228142.1 CDS B479_06415 NC_019905.1 1431825 1432817 D COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; threonine-phosphate decarboxylase 1431825..1432817 Pseudomonas putida HB3267 14287690 YP_007228143.1 CDS B479_06420 NC_019905.1 1432814 1434268 D COG1492 Cobyric acid synthase; cobyric acid synthase 1432814..1434268 Pseudomonas putida HB3267 14287691 YP_007228144.1 CDS cobU NC_019905.1 1434270 1434791 D COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 1434270..1434791 Pseudomonas putida HB3267 14287692 YP_007228145.1 CDS cobT NC_019905.1 1434788 1435843 D COG2038 NaMN:DMB phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1434788..1435843 Pseudomonas putida HB3267 14287693 YP_007228146.1 CDS B479_06435 NC_019905.1 1435840 1436406 D COG0406 Fructose-2,6-bisphosphatase; alpha-ribazole phosphatase 1435840..1436406 Pseudomonas putida HB3267 14287694 YP_007228147.1 CDS cobS NC_019905.1 1436408 1437130 D COG0368 Cobalamin-5-phosphate synthase; cobalamin synthase 1436408..1437130 Pseudomonas putida HB3267 14287695 YP_007228148.1 CDS B479_06445 NC_019905.1 1437408 1438589 D glycoside hydrolase 1437408..1438589 Pseudomonas putida HB3267 14287696 YP_007228149.1 CDS B479_06450 NC_019905.1 1438650 1439054 D COG1846 Transcriptional regulators; MarR family transcriptional regulator 1438650..1439054 Pseudomonas putida HB3267 14287697 YP_007228150.1 CDS B479_06455 NC_019905.1 1439119 1440321 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 1439119..1440321 Pseudomonas putida HB3267 14287698 YP_007228151.1 CDS B479_06460 NC_019905.1 1440318 1440440 D hypothetical protein 1440318..1440440 Pseudomonas putida HB3267 14287699 YP_007228152.1 CDS B479_06465 NC_019905.1 1440487 1441038 D COG0386 Glutathione peroxidase; glutathione peroxidase 1440487..1441038 Pseudomonas putida HB3267 14287700 YP_007228153.1 CDS B479_06470 NC_019905.1 1441090 1441560 D hypothetical protein 1441090..1441560 Pseudomonas putida HB3267 14287701 YP_007228154.1 CDS B479_06475 NC_019905.1 1441467 1441766 R hypothetical protein complement(1441467..1441766) Pseudomonas putida HB3267 14287702 YP_007228155.1 CDS B479_06480 NC_019905.1 1441842 1442771 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 1441842..1442771 Pseudomonas putida HB3267 14287703 YP_007228156.1 CDS B479_06485 NC_019905.1 1442813 1444093 R COG2067 Long-chain fatty acid transport protein; aromatic hydrocarbon degradation membrane protein complement(1442813..1444093) Pseudomonas putida HB3267 14287704 YP_007228157.1 CDS B479_06490 NC_019905.1 1444241 1444723 R hypothetical protein complement(1444241..1444723) Pseudomonas putida HB3267 14287705 YP_007228158.1 CDS B479_06495 NC_019905.1 1444973 1445197 R hypothetical protein complement(1444973..1445197) Pseudomonas putida HB3267 14287706 YP_007228159.1 CDS B479_06500 NC_019905.1 1446234 1446569 D COG0790 FOG: TPR repeat, SEL1 subfamily; Sel1 domain-containing protein 1446234..1446569 Pseudomonas putida HB3267 14287707 YP_007228160.1 CDS B479_06505 NC_019905.1 1446687 1448174 D COG1322 Uncharacterized protein conserved in bacteria; hypothetical protein 1446687..1448174 Pseudomonas putida HB3267 14287708 YP_007228161.1 CDS B479_06510 NC_019905.1 1448146 1451622 R COG0591 Na+/proline symporter; integral membrane sensor hybrid histidine kinase complement(1448146..1451622) Pseudomonas putida HB3267 14287709 YP_007228162.1 CDS B479_06515 NC_019905.1 1451749 1452927 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(1451749..1452927) Pseudomonas putida HB3267 14287710 YP_007228163.1 CDS B479_06520 NC_019905.1 1453197 1455074 D COG0477 Permeases of the major facilitator superfamily; phospholipid/glycerol acyltransferase 1453197..1455074 Pseudomonas putida HB3267 14287711 YP_007228164.1 CDS B479_06525 NC_019905.1 1455084 1455401 R COG2076 Membrane transporters of cations and cationic drugs; multidrug efflux pump complement(1455084..1455401) Pseudomonas putida HB3267 14287712 YP_007228165.1 CDS B479_06530 NC_019905.1 1455630 1456595 R COG0385 Predicted Na+-dependent transporter; bile acid:sodium symporter complement(1455630..1456595) Pseudomonas putida HB3267 14287713 YP_007228166.1 CDS rdgC NC_019905.1 1456784 1457704 R COG2974 DNA recombination-dependent growth factor C; recombination associated protein complement(1456784..1457704) Pseudomonas putida HB3267 14287714 YP_007228167.1 CDS B479_06540 NC_019905.1 1458649 1459425 R COG0024 Methionine aminopeptidase; methionine aminopeptidase complement(1458649..1459425) Pseudomonas putida HB3267 14291725 YP_007228168.1 CDS B479_06545 NC_019905.1 1459764 1463789 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; molybdopterin oxidoreductase 1459764..1463789 Pseudomonas putida HB3267 14287716 YP_007228169.1 CDS B479_06550 NC_019905.1 1464096 1466648 D COG1251 NAD(P)H-nitrite reductase; nitrite reductase, (NAD(P)H) large subunit 1464096..1466648 Pseudomonas putida HB3267 14287717 YP_007228170.1 CDS B479_06555 NC_019905.1 1466648 1467010 D COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases; nitrite reductase, (NAD(P)H) small subunit 1466648..1467010 Pseudomonas putida HB3267 14287718 YP_007228171.1 CDS B479_06560 NC_019905.1 1467162 1468094 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 1467162..1468094 Pseudomonas putida HB3267 14287719 YP_007228172.1 CDS B479_06565 NC_019905.1 1468085 1469368 R hypothetical protein complement(1468085..1469368) Pseudomonas putida HB3267 14287720 YP_007228173.1 CDS B479_06570 NC_019905.1 1469716 1470480 D COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; FKBP-type peptidylprolyl isomerase 1469716..1470480 Pseudomonas putida HB3267 14287721 YP_007228174.1 CDS B479_06575 NC_019905.1 1470773 1471213 D COG3339 Uncharacterized conserved protein; hypothetical protein 1470773..1471213 Pseudomonas putida HB3267 14287722 YP_007228175.1 CDS B479_06580 NC_019905.1 1471325 1471663 D COG1396 Predicted transcriptional regulators; Cro/CI family transcriptional regulator 1471325..1471663 Pseudomonas putida HB3267 14287723 YP_007228176.1 CDS B479_06585 NC_019905.1 1471660 1472028 D hypothetical protein 1471660..1472028 Pseudomonas putida HB3267 14287724 YP_007228177.1 CDS B479_06590 NC_019905.1 1472090 1473058 R COG2200 FOG: EAL domain; diguanylate phosphodiesterase complement(1472090..1473058) Pseudomonas putida HB3267 14287725 YP_007228178.1 CDS B479_06595 NC_019905.1 1473175 1475256 R COG0793 Periplasmic protease; carboxyl-terminal protease complement(1473175..1475256) Pseudomonas putida HB3267 14287726 YP_007228179.1 CDS B479_06600 NC_019905.1 1475401 1476363 D COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases; zinc-containing alcohol dehydrogenase 1475401..1476363 Pseudomonas putida HB3267 14287727 YP_007228180.1 CDS B479_06605 NC_019905.1 1476481 1477134 R COG0560 Phosphoserine phosphatase; HAD family hydrolase complement(1476481..1477134) Pseudomonas putida HB3267 14287728 YP_007228181.1 CDS B479_06610 NC_019905.1 1477149 1478138 R COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; ABC transporter ATP-binding protein complement(1477149..1478138) Pseudomonas putida HB3267 14287729 YP_007228182.1 CDS B479_06615 NC_019905.1 1478140 1478934 R COG1177 ABC-type spermidine/putrescine transport system, permease component II; binding-protein-dependent transport system inner membrane protein complement(1478140..1478934) Pseudomonas putida HB3267 14287730 YP_007228183.1 CDS B479_06620 NC_019905.1 1478924 1479775 R COG4132 ABC-type uncharacterized transport system, permease component; binding-protein-dependent transport system inner membrane protein complement(1478924..1479775) Pseudomonas putida HB3267 14287731 YP_007228184.1 CDS B479_06625 NC_019905.1 1479772 1480578 R COG1524 Uncharacterized proteins of the AP superfamily; type I phosphodiesterase/nucleotide pyrophosphatase complement(1479772..1480578) Pseudomonas putida HB3267 14287732 YP_007228185.1 CDS B479_06630 NC_019905.1 1480725 1481789 R COG1840 ABC-type Fe3+ transport system, periplasmic component; ABC transporter substrate-binding protein complement(1480725..1481789) Pseudomonas putida HB3267 14287733 YP_007228186.1 CDS B479_06635 NC_019905.1 1482105 1482818 D COG2188 Transcriptional regulators; GntR family transcriptional regulator 1482105..1482818 Pseudomonas putida HB3267 14287734 YP_007228187.1 CDS B479_06640 NC_019905.1 1482931 1485087 R COG0668 Small-conductance mechanosensitive channel; mechanosensitive ion channel protein MscS complement(1482931..1485087) Pseudomonas putida HB3267 14287735 YP_007228188.1 CDS B479_06645 NC_019905.1 1485132 1485299 R hypothetical protein complement(1485132..1485299) Pseudomonas putida HB3267 14287736 YP_007228189.1 CDS B479_06650 NC_019905.1 1485496 1486785 R COG1362 Aspartyl aminopeptidase; aminopeptidase 2 complement(1485496..1486785) Pseudomonas putida HB3267 14287737 YP_007228190.1 CDS B479_06655 NC_019905.1 1486955 1487590 R COG0564 Pseudouridylate synthases, 23S RNA-specific; ribosomal large subunit pseudouridine synthase A complement(1486955..1487590) Pseudomonas putida HB3267 14287738 YP_007228191.1 CDS minE NC_019905.1 1487747 1488001 R COG0851 Septum formation topological specificity factor; cell division topological specificity factor MinE complement(1487747..1488001) Pseudomonas putida HB3267 14287739 YP_007228192.1 CDS B479_06665 NC_019905.1 1488005 1488817 R COG2894 Septum formation inhibitor-activating ATPase; septum site-determining protein MinD complement(1488005..1488817) Pseudomonas putida HB3267 14287740 YP_007228193.1 CDS minC NC_019905.1 1488919 1489668 R COG0850 Septum formation inhibitor; septum formation inhibitor complement(1488919..1489668) Pseudomonas putida HB3267 14287741 YP_007228194.1 CDS B479_06675 NC_019905.1 1489789 1490724 D COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis lauroyl acyltransferase 1489789..1490724 Pseudomonas putida HB3267 14287742 YP_007228195.1 CDS B479_06680 NC_019905.1 1490874 1492022 D COG1752 Predicted esterase of the alpha-beta hydrolase superfamily; patatin 1490874..1492022 Pseudomonas putida HB3267 14287743 YP_007228196.1 CDS B479_06685 NC_019905.1 1492122 1492946 R COG2853 Surface lipoprotein; VacJ family lipoprotein complement(1492122..1492946) Pseudomonas putida HB3267 14287744 YP_007228197.1 CDS B479_06690 NC_019905.1 1492939 1494237 R putative serine protein kinase PrkA complement(1492939..1494237) Pseudomonas putida HB3267 14287745 YP_007228198.1 CDS B479_06695 NC_019905.1 1494428 1494796 D hypothetical protein 1494428..1494796 Pseudomonas putida HB3267 14287746 YP_007228199.1 CDS B479_06700 NC_019905.1 1494924 1496477 R COG5309 Exo-beta-1,3-glucanase; putative beta (1-6) glucans synthase complement(1494924..1496477) Pseudomonas putida HB3267 14287747 YP_007228200.1 CDS B479_06705 NC_019905.1 1496705 1497547 D COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components; glycine betaine ABC transporter substrate-binding protein 1496705..1497547 Pseudomonas putida HB3267 14287748 YP_007228201.1 CDS B479_06710 NC_019905.1 1497798 1498109 D COG3162 Predicted membrane protein; hypothetical protein 1497798..1498109 Pseudomonas putida HB3267 14287749 YP_007228202.1 CDS actP NC_019905.1 1498106 1499770 D COG4147 Predicted symporter; acetate permease 1498106..1499770 Pseudomonas putida HB3267 14287750 YP_007228203.1 CDS B479_06720 NC_019905.1 1499825 1499977 R hypothetical protein complement(1499825..1499977) Pseudomonas putida HB3267 14287751 YP_007228204.1 CDS B479_06725 NC_019905.1 1500259 1501068 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short chain dehydrogenase 1500259..1501068 Pseudomonas putida HB3267 14287752 YP_007228205.1 CDS B479_06730 NC_019905.1 1501189 1501377 D COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); carbon storage regulator CsrA 1501189..1501377 Pseudomonas putida HB3267 14287753 YP_007228206.1 CDS B479_06735 NC_019905.1 1501421 1501657 R COG3089 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1501421..1501657) Pseudomonas putida HB3267 14287754 YP_007228207.1 CDS B479_06740 NC_019905.1 1501669 1502889 R COG1363 Cellulase M and related proteins; peptidase M42 family protein complement(1501669..1502889) Pseudomonas putida HB3267 14287755 YP_007228208.1 CDS B479_06745 NC_019905.1 1503020 1504765 R COG0456 Acetyltransferases; acetyltransferase complement(1503020..1504765) Pseudomonas putida HB3267 14287756 YP_007228209.1 CDS B479_06750 NC_019905.1 1504769 1506556 R COG0367 Asparagine synthase (glutamine-hydrolyzing); asparagine synthase complement(1504769..1506556) Pseudomonas putida HB3267 14287757 YP_007228210.1 CDS mnmC NC_019905.1 1506784 1508748 R COG4121 Uncharacterized conserved protein; bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase complement(1506784..1508748) Pseudomonas putida HB3267 14287758 YP_007228211.1 CDS B479_06760 NC_019905.1 1508902 1510395 D COG2326 Uncharacterized conserved protein; hypothetical protein 1508902..1510395 Pseudomonas putida HB3267 14287759 YP_007228212.1 CDS B479_06765 NC_019905.1 1510651 1511616 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein 1510651..1511616 Pseudomonas putida HB3267 14287760 YP_007228213.1 CDS B479_06770 NC_019905.1 1511748 1513142 R COG0114 Fumarase; fumarate hydratase complement(1511748..1513142) Pseudomonas putida HB3267 14287761 YP_007228214.1 CDS B479_06775 NC_019905.1 1513298 1513822 D COG3184 Uncharacterized protein conserved in bacteria; hypothetical protein 1513298..1513822 Pseudomonas putida HB3267 14287762 YP_007228215.1 CDS B479_06780 NC_019905.1 1513833 1514129 D COG0271 Stress-induced morphogen (activity unknown); BolA family protein 1513833..1514129 Pseudomonas putida HB3267 14287763 YP_007228216.1 CDS B479_06785 NC_019905.1 1514356 1515288 D COG1054 Predicted sulfurtransferase; rhodanese-related sulfurtransferase 1514356..1515288 Pseudomonas putida HB3267 14287764 YP_007228217.1 CDS B479_06790 NC_019905.1 1515292 1515924 D COG3531 Predicted protein-disulfide isomerase; DSBA oxidoreductase 1515292..1515924 Pseudomonas putida HB3267 14287765 YP_007228218.1 CDS B479_06795 NC_019905.1 1515917 1517749 D COG1132 ABC-type multidrug transport system, ATPase and permease components; ABC transporter ATP-binding protein 1515917..1517749 Pseudomonas putida HB3267 14287766 YP_007228219.1 CDS B479_06800 NC_019905.1 1517988 1520432 D COG2202 FOG: PAS/PAC domain; GAF and PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1517988..1520432 Pseudomonas putida HB3267 14287767 YP_007228220.1 CDS B479_06805 NC_019905.1 1520463 1521248 D COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C; hypothetical protein 1520463..1521248 Pseudomonas putida HB3267 14287768 YP_007228221.1 CDS B479_06810 NC_019905.1 1521370 1522110 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); oxoacyl-(acyl carrier protein) reductase complement(1521370..1522110) Pseudomonas putida HB3267 14287769 YP_007228222.1 CDS B479_06815 NC_019905.1 1522203 1522874 R COG0546 Predicted phosphatases; phosphoglycolate phosphatase complement(1522203..1522874) Pseudomonas putida HB3267 14287770 YP_007228223.1 CDS B479_06820 NC_019905.1 1522877 1523575 R COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase; bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase complement(1522877..1523575) Pseudomonas putida HB3267 14287771 YP_007228224.1 CDS mtnA NC_019905.1 1523687 1524763 D COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family; methylthioribose-1-phosphate isomerase 1523687..1524763 Pseudomonas putida HB3267 14287772 YP_007228225.1 CDS B479_06830 NC_019905.1 1525322 1528087 D COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA gyrase subunit A 1525322..1528087 Pseudomonas putida HB3267 14287773 YP_007228226.1 CDS B479_06835 NC_019905.1 1528355 1529440 D COG1932 Phosphoserine aminotransferase; 3-phosphoserine/phosphohydroxythreonine aminotransferase 1528355..1529440 Pseudomonas putida HB3267 14287774 YP_007228227.1 CDS B479_06840 NC_019905.1 1529440 1530534 D COG1605 Chorismate mutase; chorismate mutase 1529440..1530534 Pseudomonas putida HB3267 14287775 YP_007228228.1 CDS B479_06845 NC_019905.1 1530713 1532953 D COG0287 Prephenate dehydrogenase; bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase 1530713..1532953 Pseudomonas putida HB3267 14287776 YP_007228229.1 CDS cmk NC_019905.1 1532950 1533636 D COG0283 Cytidylate kinase; cytidylate kinase 1532950..1533636 Pseudomonas putida HB3267 14287777 YP_007228230.1 CDS rpsA NC_019905.1 1533761 1535437 D COG0539 Ribosomal protein S1; 30S ribosomal protein S1 1533761..1535437 Pseudomonas putida HB3267 14287778 YP_007228231.1 CDS B479_06860 NC_019905.1 1535520 1536584 D COG1835 Predicted acyltransferases; sugar acetylase 1535520..1536584 Pseudomonas putida HB3267 14287779 YP_007228232.1 CDS B479_06865 NC_019905.1 1537472 1538065 R hypothetical protein complement(1537472..1538065) Pseudomonas putida HB3267 14287780 YP_007228233.1 CDS ihfB NC_019905.1 1538422 1538721 D COG0776 Bacterial nucleoid DNA-binding protein; integration host factor subunit beta 1538422..1538721 Pseudomonas putida HB3267 14287781 YP_007228234.1 CDS B479_06875 NC_019905.1 1538741 1539004 D hypothetical protein 1538741..1539004 Pseudomonas putida HB3267 14287782 YP_007228235.1 CDS B479_06880 NC_019905.1 1539106 1540533 D COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing; beta-lactamase domain-containing protein 1539106..1540533 Pseudomonas putida HB3267 14287783 YP_007228236.1 CDS B479_06885 NC_019905.1 1540752 1541816 D COG3765 Chain length determinant protein; hypothetical protein 1540752..1541816 Pseudomonas putida HB3267 14287784 YP_007228237.1 CDS B479_06890 NC_019905.1 1541996 1543333 D COG3765 Chain length determinant protein; chain length determinant protein 1541996..1543333 Pseudomonas putida HB3267 14287785 YP_007228238.1 CDS B479_06895 NC_019905.1 1543624 1544934 D COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase 1543624..1544934 Pseudomonas putida HB3267 14287786 YP_007228239.1 CDS B479_06900 NC_019905.1 1545009 1545959 D COG0673 Predicted dehydrogenases and related proteins; UDP-2-acetamido-2-deoxy-d-glucuronic acid 3-dehydrogenase, WbpB 1545009..1545959 Pseudomonas putida HB3267 14287787 YP_007228240.1 CDS B479_06905 NC_019905.1 1546091 1547923 D COG1835 Predicted acyltransferases; acetyltransferase 1546091..1547923 Pseudomonas putida HB3267 14287788 YP_007228241.1 CDS B479_06910 NC_019905.1 1547920 1548495 D COG0110 Acetyltransferase (isoleucine patch superfamily); UDP-2-acetamido-3-amino-2,3-dideoxy-d-glucuronic acid N-acetyltransferase, WbpD 1547920..1548495 Pseudomonas putida HB3267 14287789 YP_007228242.1 CDS B479_06915 NC_019905.1 1548498 1549595 D COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; UDP-2-acetamido-2-dideoxy-d-ribo-hex-3-uluronic acid transaminase, wbpE 1548498..1549595 Pseudomonas putida HB3267 14287790 YP_007228243.1 CDS B479_06920 NC_019905.1 1549592 1550875 D COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; polysaccharide biosynthesis protein 1549592..1550875 Pseudomonas putida HB3267 14287791 YP_007228244.1 CDS B479_06925 NC_019905.1 1551438 1552346 D COG3507 Beta-xylosidase; putative B-band O-antigen polymerase 1551438..1552346 Pseudomonas putida HB3267 14287792 YP_007228245.1 CDS B479_06930 NC_019905.1 1552592 1552951 D COG0110 Acetyltransferase (isoleucine patch superfamily); putative acetyltransferase 1552592..1552951 Pseudomonas putida HB3267 14287793 YP_007228246.1 CDS B479_06935 NC_019905.1 1553197 1554090 D COG0438 Glycosyltransferase; group 1 glycosyl transferase 1553197..1554090 Pseudomonas putida HB3267 14287794 YP_007228247.1 CDS B479_06940 NC_019905.1 1554106 1555242 D COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; LPS biosynthesis protein WbpG 1554106..1555242 Pseudomonas putida HB3267 14287795 YP_007228248.1 CDS hisH NC_019905.1 1555239 1555853 D COG0118 Glutamine amidotransferase; imidazole glycerol phosphate synthase subunit HisH 1555239..1555853 Pseudomonas putida HB3267 14287796 YP_007228249.1 CDS B479_06950 NC_019905.1 1555919 1556650 D COG0107 Imidazoleglycerol-phosphate synthase; imidazole glycerol phosphate synthase subunit HisF 1555919..1556650 Pseudomonas putida HB3267 14287797 YP_007228250.1 CDS B479_06955 NC_019905.1 1556682 1557716 D COG1086 Predicted nucleoside-diphosphate sugar epimerases; polysaccharide biosynthesis protein 1556682..1557716 Pseudomonas putida HB3267 14287798 YP_007228251.1 CDS B479_06960 NC_019905.1 1557720 1558832 D COG0451 Nucleoside-diphosphate-sugar epimerases; NAD-dependent epimerase/dehydratase 1557720..1558832 Pseudomonas putida HB3267 14287799 YP_007228252.1 CDS B479_06965 NC_019905.1 1558860 1559990 D COG0381 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 1558860..1559990 Pseudomonas putida HB3267 14287800 YP_007228253.1 CDS B479_06970 NC_019905.1 1560004 1561257 D COG0438 Glycosyltransferase; glycosyl transferase group 1 protein 1560004..1561257 Pseudomonas putida HB3267 14287801 YP_007228254.1 CDS B479_06975 NC_019905.1 1561254 1562219 D COG0451 Nucleoside-diphosphate-sugar epimerases; NAD-dependent epimerase/dehydratase 1561254..1562219 Pseudomonas putida HB3267 14287802 YP_007228255.1 CDS B479_06980 NC_019905.1 1562216 1563235 D COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; glycosyl transferase family protein 1562216..1563235 Pseudomonas putida HB3267 14287803 YP_007228256.1 CDS B479_06985 NC_019905.1 1563286 1565283 D COG1086 Predicted nucleoside-diphosphate sugar epimerases; polysaccharide biosynthesis protein CapD 1563286..1565283 Pseudomonas putida HB3267 14287804 YP_007228257.1 CDS B479_06990 NC_019905.1 1565466 1566008 D COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes; dTDP-4-dehydrorhamnose 3,5-epimerase 1565466..1566008 Pseudomonas putida HB3267 14287805 YP_007228258.1 CDS B479_06995 NC_019905.1 1566135 1567205 D COG1088 dTDP-D-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 1566135..1567205 Pseudomonas putida HB3267 14287806 YP_007228259.1 CDS B479_07000 NC_019905.1 1567202 1568098 D COG1091 dTDP-4-dehydrorhamnose reductase; DTDP-4-dehydrorhamnose reductase 1567202..1568098 Pseudomonas putida HB3267 14287807 YP_007228260.1 CDS B479_07005 NC_019905.1 1568095 1568985 D COG1209 dTDP-glucose pyrophosphorylase; glucose-1-phosphate thymidylyltransferase 1568095..1568985 Pseudomonas putida HB3267 14287808 YP_007228261.1 CDS B479_07010 NC_019905.1 1569179 1570339 R COG0381 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(1569179..1570339) Pseudomonas putida HB3267 14287809 YP_007228262.1 CDS B479_07015 NC_019905.1 1570797 1571213 D COG1555 DNA uptake protein and related DNA-binding proteins; Helix-hairpin-helix repeat-containing competence protein ComEA 1570797..1571213 Pseudomonas putida HB3267 14287810 YP_007228263.1 CDS B479_07020 NC_019905.1 1571442 1571609 R hypothetical protein complement(1571442..1571609) Pseudomonas putida HB3267 14287811 YP_007228264.1 CDS B479_07025 NC_019905.1 1571791 1572492 D COG0284 Orotidine-5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 1571791..1572492 Pseudomonas putida HB3267 14287812 YP_007228265.1 CDS B479_07030 NC_019905.1 1572552 1573382 R COG1968 Uncharacterized bacitracin resistance protein; undecaprenyl pyrophosphate phosphatase complement(1572552..1573382) Pseudomonas putida HB3267 14287813 YP_007228266.1 CDS B479_07035 NC_019905.1 1573576 1573851 R COG0457 FOG: TPR repeat; hypothetical protein complement(1573576..1573851) Pseudomonas putida HB3267 14287814 YP_007228267.1 CDS B479_07040 NC_019905.1 1574525 1575526 R COG2130 Putative NADP-dependent oxidoreductases; alcohol dehydrogenase complement(1574525..1575526) Pseudomonas putida HB3267 14287815 YP_007228268.1 CDS B479_07045 NC_019905.1 1575702 1576463 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short chain dehydrogenase 1575702..1576463 Pseudomonas putida HB3267 14287816 YP_007228269.1 CDS B479_07050 NC_019905.1 1576838 1577284 D COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; GntR family transcriptional regulator 1576838..1577284 Pseudomonas putida HB3267 14287817 YP_007228270.1 CDS B479_07055 NC_019905.1 1577384 1579324 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1577384..1579324 Pseudomonas putida HB3267 14287818 YP_007228271.1 CDS B479_07060 NC_019905.1 1579408 1580598 R COG3135 Uncharacterized protein involved in benzoate metabolism; benzoate transporter complement(1579408..1580598) Pseudomonas putida HB3267 14287819 YP_007228272.1 CDS B479_07065 NC_019905.1 1580891 1581493 D COG0625 Glutathione S-transferase; glutathione S-transferase domain-containing protein 1580891..1581493 Pseudomonas putida HB3267 14287820 YP_007228273.1 CDS B479_07070 NC_019905.1 1581624 1581995 R COG0695 Glutaredoxin and related proteins; glutaredoxin complement(1581624..1581995) Pseudomonas putida HB3267 14287821 YP_007228274.1 CDS folE NC_019905.1 1582055 1582600 R COG0302 GTP cyclohydrolase I; GTP cyclohydrolase I complement(1582055..1582600) Pseudomonas putida HB3267 14287822 YP_007228275.1 CDS B479_07080 NC_019905.1 1582671 1583231 R COG2840 Uncharacterized protein conserved in bacteria; Smr protein/MutS2 complement(1582671..1583231) Pseudomonas putida HB3267 14287823 YP_007228276.1 CDS B479_07085 NC_019905.1 1583395 1583715 R hypothetical protein complement(1583395..1583715) Pseudomonas putida HB3267 14287824 YP_007228277.1 CDS B479_07090 NC_019905.1 1583802 1584392 R COG1335 Amidases related to nicotinamidase; isochorismatase hydrolase complement(1583802..1584392) Pseudomonas putida HB3267 14287825 YP_007228278.1 CDS B479_07095 NC_019905.1 1584573 1585481 D COG2890 Methylase of polypeptide chain release factors; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1584573..1585481 Pseudomonas putida HB3267 14287826 YP_007228279.1 CDS B479_07100 NC_019905.1 1585573 1586355 R hypothetical protein complement(1585573..1586355) Pseudomonas putida HB3267 14287827 YP_007228280.1 CDS B479_07105 NC_019905.1 1586556 1587518 R COG1073 Hydrolases of the alpha/beta superfamily; alpha/beta hydrolase fold protein complement(1586556..1587518) Pseudomonas putida HB3267 14287828 YP_007228281.1 CDS B479_07110 NC_019905.1 1588892 1590046 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 1588892..1590046 Pseudomonas putida HB3267 14287829 YP_007228282.1 CDS B479_07115 NC_019905.1 1590046 1590582 D COG1791 Uncharacterized conserved protein, contains double-stranded beta-helix domain; putative oxidase 1590046..1590582 Pseudomonas putida HB3267 14287830 YP_007228283.1 CDS B479_07120 NC_019905.1 1590708 1590980 R hypothetical protein complement(1590708..1590980) Pseudomonas putida HB3267 14287831 YP_007228284.1 CDS B479_07125 NC_019905.1 1591246 1591770 D COG0666 FOG: Ankyrin repeat; ankyrin 1591246..1591770 Pseudomonas putida HB3267 14287832 YP_007228285.1 CDS B479_07130 NC_019905.1 1591831 1592361 D hypothetical protein 1591831..1592361 Pseudomonas putida HB3267 14287833 YP_007228286.1 CDS B479_07135 NC_019905.1 1592484 1593422 R COG0428 Predicted divalent heavy-metal cations transporter; zinc/iron permease complement(1592484..1593422) Pseudomonas putida HB3267 14287834 YP_007228287.1 CDS B479_07140 NC_019905.1 1593548 1593739 D hypothetical protein 1593548..1593739 Pseudomonas putida HB3267 14287835 YP_007228288.1 CDS B479_07145 NC_019905.1 1593980 1596055 D COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; sulfatase 1593980..1596055 Pseudomonas putida HB3267 14287836 YP_007228289.1 CDS B479_07150 NC_019905.1 1596263 1596499 D hypothetical protein 1596263..1596499 Pseudomonas putida HB3267 14287837 YP_007228290.1 CDS B479_07155 NC_019905.1 1596676 1597008 D hypothetical protein 1596676..1597008 Pseudomonas putida HB3267 14287838 YP_007228291.1 CDS B479_07160 NC_019905.1 1597131 1597931 R COG2010 Cytochrome c, mono- and diheme variants; cytochrome c complement(1597131..1597931) Pseudomonas putida HB3267 14287839 YP_007228292.1 CDS B479_07165 NC_019905.1 1597998 1598093 R hypothetical protein complement(1597998..1598093) Pseudomonas putida HB3267 14287840 YP_007228293.1 CDS B479_07170 NC_019905.1 1598460 1599191 D COG0518 GMP synthase - Glutamine amidotransferase domain; amidotransferase 1598460..1599191 Pseudomonas putida HB3267 14287841 YP_007228294.1 CDS B479_07175 NC_019905.1 1599324 1600295 R COG0598 Mg2+ and Co2+ transporters; magnesium and cobalt transport protein CorA complement(1599324..1600295) Pseudomonas putida HB3267 14287842 YP_007228295.1 CDS B479_07180 NC_019905.1 1600360 1601079 R COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(1600360..1601079) Pseudomonas putida HB3267 14287843 YP_007228296.1 CDS B479_07185 NC_019905.1 1601199 1601888 R COG1024 Enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase complement(1601199..1601888) Pseudomonas putida HB3267 14287844 YP_007228297.1 CDS B479_07190 NC_019905.1 1602347 1604479 R COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent siderophore receptor complement(1602347..1604479) Pseudomonas putida HB3267 14291726 YP_007228298.1 CDS B479_07195 NC_019905.1 1604621 1605001 R hypothetical protein complement(1604621..1605001) Pseudomonas putida HB3267 14287846 YP_007228299.1 CDS B479_07200 NC_019905.1 1605122 1606309 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(1605122..1606309) Pseudomonas putida HB3267 14287847 YP_007228300.1 CDS fabG NC_019905.1 1606695 1607444 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 3-ketoacyl-(acyl-carrier-protein) reductase complement(1606695..1607444) Pseudomonas putida HB3267 14287848 YP_007228301.1 CDS B479_07210 NC_019905.1 1607569 1608501 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 1607569..1608501 Pseudomonas putida HB3267 14287849 YP_007228302.1 CDS B479_07215 NC_019905.1 1608626 1609096 R COG0782 Transcription elongation factor; GreA/GreB family elongation factor complement(1608626..1609096) Pseudomonas putida HB3267 14287850 YP_007228303.1 CDS B479_07220 NC_019905.1 1609099 1609497 R hypothetical protein complement(1609099..1609497) Pseudomonas putida HB3267 14287851 YP_007228304.1 CDS B479_07225 NC_019905.1 1609628 1610755 D COG4394 Uncharacterized protein conserved in bacteria; hypothetical protein 1609628..1610755 Pseudomonas putida HB3267 14287852 YP_007228305.1 CDS B479_07230 NC_019905.1 1610804 1611373 D COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P 1610804..1611373 Pseudomonas putida HB3267 14287853 YP_007228306.1 CDS B479_07235 NC_019905.1 1611431 1611859 R COG1764 Predicted redox protein, regulator of disulfide bond formation; OsmC family protein complement(1611431..1611859) Pseudomonas putida HB3267 14287854 YP_007228307.1 CDS B479_07240 NC_019905.1 1612001 1612456 R COG1846 Transcriptional regulators; MarR family transcriptional regulator complement(1612001..1612456) Pseudomonas putida HB3267 14287855 YP_007228308.1 CDS B479_07245 NC_019905.1 1612515 1613468 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(1612515..1613468) Pseudomonas putida HB3267 14287856 YP_007228309.1 CDS B479_07250 NC_019905.1 1613583 1614332 D COG0730 Predicted permeases; hypothetical protein 1613583..1614332 Pseudomonas putida HB3267 14287857 YP_007228310.1 CDS B479_07255 NC_019905.1 1614403 1615254 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(1614403..1615254) Pseudomonas putida HB3267 14287858 YP_007228311.1 CDS B479_07260 NC_019905.1 1615351 1615569 D COG5457 Uncharacterized conserved small protein; hypothetical protein 1615351..1615569 Pseudomonas putida HB3267 14287859 YP_007228312.1 CDS B479_07265 NC_019905.1 1615681 1617027 R COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase complement(1615681..1617027) Pseudomonas putida HB3267 14287860 YP_007228313.1 CDS B479_07270 NC_019905.1 1617144 1617899 D COG0421 Spermidine synthase; hypothetical protein 1617144..1617899 Pseudomonas putida HB3267 14287861 YP_007228314.1 CDS B479_07275 NC_019905.1 1618392 1620071 D COG0513 Superfamily II DNA and RNA helicases; DEAD/DEAH box helicase 1618392..1620071 Pseudomonas putida HB3267 14287862 YP_007228315.1 CDS B479_07280 NC_019905.1 1620197 1620964 R COG3384 Uncharacterized conserved protein; extradiol ring-cleavage dioxygenase class III protein subunit B complement(1620197..1620964) Pseudomonas putida HB3267 14287863 YP_007228316.1 CDS B479_07285 NC_019905.1 1621066 1621728 D COG0500 SAM-dependent methyltransferases; thiopurine S-methyltransferase 1621066..1621728 Pseudomonas putida HB3267 14287864 YP_007228317.1 CDS B479_07290 NC_019905.1 1621770 1622657 R COG0501 Zn-dependent protease with chaperone function; heat shock protein HtpX complement(1621770..1622657) Pseudomonas putida HB3267 14287865 YP_007228318.1 CDS B479_07295 NC_019905.1 1622933 1624144 R COG0436 Aspartate/tyrosine/aromatic aminotransferase; aminotransferase AlaT complement(1622933..1624144) Pseudomonas putida HB3267 14287866 YP_007228319.1 CDS B479_07300 NC_019905.1 1624312 1624707 D COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; methionine sulfoxide reductase B 1624312..1624707 Pseudomonas putida HB3267 14287867 YP_007228320.1 CDS B479_07305 NC_019905.1 1624721 1625209 D COG0386 Glutathione peroxidase; glutathione peroxidase 1624721..1625209 Pseudomonas putida HB3267 14287868 YP_007228321.1 CDS B479_07310 NC_019905.1 1625199 1627556 R COG0642 Signal transduction histidine kinase; histidine kinase complement(1625199..1627556) Pseudomonas putida HB3267 14287869 YP_007228322.1 CDS B479_07315 NC_019905.1 1627698 1628585 D COG2607 Predicted ATPase (AAA+ superfamily); hypothetical protein 1627698..1628585 Pseudomonas putida HB3267 14287870 YP_007228323.1 CDS B479_07320 NC_019905.1 1628586 1629068 D COG1956 GAF domain-containing protein; GAF domain-containing protein 1628586..1629068 Pseudomonas putida HB3267 14287871 YP_007228324.1 CDS B479_07325 NC_019905.1 1629196 1629963 R hypothetical protein complement(1629196..1629963) Pseudomonas putida HB3267 14287872 YP_007228325.1 CDS B479_07330 NC_019905.1 1630921 1632006 R COG3539 P pilus assembly protein, pilin FimA; fimbrial protein-like protein complement(1630921..1632006) Pseudomonas putida HB3267 14291731 YP_007228326.1 CDS B479_07335 NC_019905.1 1632003 1633115 R COG3188 P pilus assembly protein, porin PapC; fimbrial biogenesis outer membrane usher protein complement(1632003..1633115) Pseudomonas putida HB3267 14287874 YP_007228327.1 CDS B479_07340 NC_019905.1 1633132 1635129 D COG3468 Type V secretory pathway, adhesin AidA; outer membrane autotransporter 1633132..1635129 Pseudomonas putida HB3267 14287875 YP_007228328.1 CDS B479_07345 NC_019905.1 1635192 1636688 D hypothetical protein 1635192..1636688 Pseudomonas putida HB3267 14287876 YP_007228329.1 CDS B479_07350 NC_019905.1 1636695 1637441 R COG3121 P pilus assembly protein, chaperone PapD; pili assembly chaperone complement(1636695..1637441) Pseudomonas putida HB3267 14287877 YP_007228330.1 CDS B479_07355 NC_019905.1 1637505 1638047 R COG3539 P pilus assembly protein, pilin FimA; fimbrial protein-like protein complement(1637505..1638047) Pseudomonas putida HB3267 14287878 YP_007228331.1 CDS B479_07360 NC_019905.1 1638210 1638623 R hypothetical protein complement(1638210..1638623) Pseudomonas putida HB3267 14287879 YP_007228332.1 CDS B479_07365 NC_019905.1 1638897 1639331 D hypothetical protein 1638897..1639331 Pseudomonas putida HB3267 14287880 YP_007228333.1 CDS fadE NC_019905.1 1639464 1641911 R COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase complement(1639464..1641911) Pseudomonas putida HB3267 14287881 YP_007228334.1 CDS B479_07375 NC_019905.1 1642193 1642816 D COG0625 Glutathione S-transferase; glutathione S-transferase domain-containing protein 1642193..1642816 Pseudomonas putida HB3267 14287882 YP_007228335.1 CDS B479_07380 NC_019905.1 1642961 1643893 D COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein 1642961..1643893 Pseudomonas putida HB3267 14287883 YP_007228336.1 CDS B479_07385 NC_019905.1 1643890 1644669 D COG0842 ABC-type multidrug transport system, permease component; inner membrane transport permease 1643890..1644669 Pseudomonas putida HB3267 14287884 YP_007228337.1 CDS B479_07390 NC_019905.1 1644553 1645185 R COG3216 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1644553..1645185) Pseudomonas putida HB3267 14287885 YP_007228338.1 CDS B479_07395 NC_019905.1 1645340 1647541 D COG0658 Predicted membrane metal-binding protein; DNA internalization-related competence protein ComEC/Rec2 1645340..1647541 Pseudomonas putida HB3267 14287886 YP_007228339.1 CDS B479_07400 NC_019905.1 1647765 1648400 D COG0811 Biopolymer transport proteins; MotA/TolQ/ExbB proton channel 1647765..1648400 Pseudomonas putida HB3267 14287887 YP_007228340.1 CDS B479_07405 NC_019905.1 1648397 1648831 D COG0848 Biopolymer transport protein; biopolymer transport protein ExbD/TolR 1648397..1648831 Pseudomonas putida HB3267 14287888 YP_007228341.1 CDS lpxK NC_019905.1 1648831 1649832 D COG1663 Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase 1648831..1649832 Pseudomonas putida HB3267 14287889 YP_007228342.1 CDS B479_07415 NC_019905.1 1649877 1650062 D COG2835 Uncharacterized conserved protein; hypothetical protein 1649877..1650062 Pseudomonas putida HB3267 14287890 YP_007228343.1 CDS B479_07420 NC_019905.1 1650059 1650823 D COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; 3-deoxy-manno-octulosonate cytidylyltransferase 1650059..1650823 Pseudomonas putida HB3267 14287891 YP_007228344.1 CDS B479_07425 NC_019905.1 1650823 1651287 D COG0394 Protein-tyrosine-phosphatase; protein tyrosine phosphatase 1650823..1651287 Pseudomonas putida HB3267 14287892 YP_007228345.1 CDS murB NC_019905.1 1651284 1652303 D COG0812 UDP-N-acetylmuramate dehydrogenase; UDP-N-acetylenolpyruvoylglucosamine reductase 1651284..1652303 Pseudomonas putida HB3267 14287893 YP_007228346.1 CDS B479_07435 NC_019905.1 1652489 1655731 R COG1530 Ribonucleases G and E; ribonuclease E complement(1652489..1655731) Pseudomonas putida HB3267 14287894 YP_007228347.1 CDS B479_07440 NC_019905.1 1656539 1657495 D COG0564 Pseudouridylate synthases, 23S RNA-specific; ribosomal large subunit pseudouridine synthase C 1656539..1657495 Pseudomonas putida HB3267 14287895 YP_007228348.1 CDS B479_07445 NC_019905.1 1657499 1658173 D COG0546 Predicted phosphatases; HAD family hydrolase 1657499..1658173 Pseudomonas putida HB3267 14287896 YP_007228349.1 CDS B479_07450 NC_019905.1 1658180 1659172 D COG0616 Periplasmic serine proteases (ClpP class); signal peptide peptidase SppA, 36K type 1658180..1659172 Pseudomonas putida HB3267 14287897 YP_007228350.1 CDS B479_07455 NC_019905.1 1659211 1659789 R COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Maf-like protein complement(1659211..1659789) Pseudomonas putida HB3267 14287898 YP_007228351.1 CDS B479_07460 NC_019905.1 1659886 1660413 D COG1399 Predicted metal-binding, possibly nucleic acid-binding protein; hypothetical protein 1659886..1660413 Pseudomonas putida HB3267 14287899 YP_007228352.1 CDS rpmF NC_019905.1 1660427 1660609 D COG0333 Ribosomal protein L32; 50S ribosomal protein L32 1660427..1660609 Pseudomonas putida HB3267 14287900 YP_007228353.1 CDS B479_07470 NC_019905.1 1660643 1661623 D COG0416 Fatty acid/phospholipid biosynthesis enzyme; phosphate acyltransferase 1660643..1661623 Pseudomonas putida HB3267 14287901 YP_007228354.1 CDS B479_07475 NC_019905.1 1661930 1662814 D COG0331 (acyl-carrier-protein) S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase 1661930..1662814 Pseudomonas putida HB3267 14287902 YP_007228355.1 CDS fabG NC_019905.1 1662830 1663570 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 3-ketoacyl-(acyl-carrier-protein) reductase 1662830..1663570 Pseudomonas putida HB3267 14287903 YP_007228356.1 CDS acpP NC_019905.1 1663774 1664010 D COG0236 Acyl carrier protein; acyl carrier protein 1663774..1664010 Pseudomonas putida HB3267 14287904 YP_007228357.1 CDS B479_07490 NC_019905.1 1664199 1665443 D COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-(acyl carrier protein) synthase II 1664199..1665443 Pseudomonas putida HB3267 14287905 YP_007228358.1 CDS B479_07495 NC_019905.1 1665443 1666258 D COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; 4-amino-4-deoxychorismate lyase 1665443..1666258 Pseudomonas putida HB3267 14287906 YP_007228359.1 CDS B479_07500 NC_019905.1 1666263 1667465 D COG1559 Predicted periplasmic solute-binding protein; aminodeoxychorismate lyase 1666263..1667465 Pseudomonas putida HB3267 14287907 YP_007228360.1 CDS tmk NC_019905.1 1667475 1668107 D COG0125 Thymidylate kinase; thymidylate kinase 1667475..1668107 Pseudomonas putida HB3267 14287908 YP_007228361.1 CDS B479_07510 NC_019905.1 1668100 1669086 D COG0470 ATPase involved in DNA replication; DNA polymerase III subunit delta' 1668100..1669086 Pseudomonas putida HB3267 14287909 YP_007228362.1 CDS B479_07515 NC_019905.1 1669117 1669899 D COG0084 Mg-dependent DNase; TatD family deoxyribonuclease 1669117..1669899 Pseudomonas putida HB3267 14287910 YP_007228363.1 CDS B479_07520 NC_019905.1 1670299 1670934 D COG1309 Transcriptional regulator; TetR family transcriptional regulator 1670299..1670934 Pseudomonas putida HB3267 14287911 YP_007228364.1 CDS B479_07525 NC_019905.1 1671144 1672112 D COG2896 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor synthesis domain-containing protein 1671144..1672112 Pseudomonas putida HB3267 14287912 YP_007228365.1 CDS B479_07530 NC_019905.1 1672179 1672784 D lipoprotein 1672179..1672784 Pseudomonas putida HB3267 14287913 YP_007228366.1 CDS B479_07535 NC_019905.1 1672795 1673355 D COG3816 Uncharacterized protein conserved in bacteria; hypothetical protein 1672795..1673355 Pseudomonas putida HB3267 14287914 YP_007228367.1 CDS B479_07540 NC_019905.1 1673511 1673927 D COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain; cupin 1673511..1673927 Pseudomonas putida HB3267 14287915 YP_007228368.1 CDS B479_07545 NC_019905.1 1673900 1675186 R COG0590 Cytosine/adenosine deaminases; hypothetical protein complement(1673900..1675186) Pseudomonas putida HB3267 14287916 YP_007228369.1 CDS B479_07550 NC_019905.1 1675439 1676635 R COG1448 Aspartate/tyrosine/aromatic aminotransferase; aromatic amino acid aminotransferase complement(1675439..1676635) Pseudomonas putida HB3267 14291732 YP_007228370.1 CDS B479_07555 NC_019905.1 1676924 1678939 D COG0556 Helicase subunit of the DNA excision repair complex; excinuclease ABC subunit B 1676924..1678939 Pseudomonas putida HB3267 14287918 YP_007228371.1 CDS B479_07560 NC_019905.1 1679067 1680617 R COG0477 Permeases of the major facilitator superfamily; EmrB/QacA family drug resistance transporter complement(1679067..1680617) Pseudomonas putida HB3267 14287919 YP_007228372.1 CDS B479_07565 NC_019905.1 1680607 1681662 R COG1566 Multidrug resistance efflux pump; secretion protein HlyD family protein complement(1680607..1681662) Pseudomonas putida HB3267 14287920 YP_007228373.1 CDS gltX NC_019905.1 1681806 1683287 D COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-tRNA ligase 1681806..1683287 Pseudomonas putida HB3267 14287921 YP_007228374.1 CDS B479_07575 NC_019905.1 1684177 1684716 D COG1309 Transcriptional regulator; TetR family transcriptional regulator 1684177..1684716 Pseudomonas putida HB3267 14291736 YP_007228375.1 CDS B479_07580 NC_019905.1 1684732 1685613 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); hydrolase 1684732..1685613 Pseudomonas putida HB3267 14287923 YP_007228376.1 CDS B479_07585 NC_019905.1 1685754 1686188 D COG0824 Predicted thioesterase; thioesterase superfamily protein 1685754..1686188 Pseudomonas putida HB3267 14287924 YP_007228377.1 CDS B479_07590 NC_019905.1 1686240 1687211 D COG0042 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase C 1686240..1687211 Pseudomonas putida HB3267 14287925 YP_007228378.1 CDS B479_07595 NC_019905.1 1687384 1687827 D COG0071 Molecular chaperone (small heat shock protein); heat shock protein Hsp20 1687384..1687827 Pseudomonas putida HB3267 14287926 YP_007228379.1 CDS B479_07600 NC_019905.1 1687928 1691224 R COG2202 FOG: PAS/PAC domain; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(1687928..1691224) Pseudomonas putida HB3267 14287927 YP_007228380.1 CDS B479_07605 NC_019905.1 1691287 1692165 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(1691287..1692165) Pseudomonas putida HB3267 14287928 YP_007228381.1 CDS B479_07610 NC_019905.1 1692297 1693730 D COG0065 3-isopropylmalate dehydratase large subunit; isopropylmalate isomerase large subunit 1692297..1693730 Pseudomonas putida HB3267 14287929 YP_007228382.1 CDS leuD NC_019905.1 1693727 1694371 D COG0066 3-isopropylmalate dehydratase small subunit; isopropylmalate isomerase small subunit 1693727..1694371 Pseudomonas putida HB3267 14287930 YP_007228383.1 CDS B479_07620 NC_019905.1 1694519 1695283 D COG0500 SAM-dependent methyltransferases; type 11 methyltransferase 1694519..1695283 Pseudomonas putida HB3267 14287931 YP_007228384.1 CDS B479_07625 NC_019905.1 1695338 1696420 D COG0473 Isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 1695338..1696420 Pseudomonas putida HB3267 14287932 YP_007228385.1 CDS B479_07630 NC_019905.1 1696484 1697596 D COG0136 Aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase 1696484..1697596 Pseudomonas putida HB3267 14287933 YP_007228386.1 CDS B479_07635 NC_019905.1 1697968 1698972 D COG0136 Aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase 1697968..1698972 Pseudomonas putida HB3267 14287934 YP_007228387.1 CDS B479_07640 NC_019905.1 1699044 1701767 D COG3170 Tfp pilus assembly protein FimV; peptidoglycan-binding LysM 1699044..1701767 Pseudomonas putida HB3267 14287935 YP_007228388.1 CDS truA NC_019905.1 1701968 1702822 D COG0101 Pseudouridylate synthase; tRNA pseudouridine synthase A 1701968..1702822 Pseudomonas putida HB3267 14287936 YP_007228389.1 CDS B479_07650 NC_019905.1 1702884 1703504 D COG0135 Phosphoribosylanthranilate isomerase; N-(5'-phosphoribosyl)anthranilate isomerase 1702884..1703504 Pseudomonas putida HB3267 14287937 YP_007228390.1 CDS B479_07655 NC_019905.1 1703726 1704619 D COG0777 Acetyl-CoA carboxylase beta subunit; acetyl-CoA carboxylase subunit beta 1703726..1704619 Pseudomonas putida HB3267 14287938 YP_007228391.1 CDS B479_07660 NC_019905.1 1704619 1705926 D COG0285 Folylpolyglutamate synthase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 1704619..1705926 Pseudomonas putida HB3267 14287939 YP_007228392.1 CDS B479_07665 NC_019905.1 1705910 1706575 D COG3147 Uncharacterized protein conserved in bacteria; sporulation domain-containing protein 1705910..1706575 Pseudomonas putida HB3267 14287940 YP_007228393.1 CDS B479_07670 NC_019905.1 1706804 1707361 D COG1286 Uncharacterized membrane protein, required for colicin V production; colicin V production protein 1706804..1707361 Pseudomonas putida HB3267 14287941 YP_007228394.1 CDS B479_07675 NC_019905.1 1707404 1708909 D COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; amidophosphoribosyltransferase 1707404..1708909 Pseudomonas putida HB3267 14287942 YP_007228395.1 CDS B479_07680 NC_019905.1 1708926 1710137 D COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; O-succinylhomoserine sulfhydrylase 1708926..1710137 Pseudomonas putida HB3267 14287943 YP_007228396.1 CDS B479_07685 NC_019905.1 1710134 1710907 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); oxidoreductase 1710134..1710907 Pseudomonas putida HB3267 14287944 YP_007228397.1 CDS B479_07690 NC_019905.1 1711898 1712737 D hypothetical protein 1711898..1712737 Pseudomonas putida HB3267 14291740 YP_007228398.1 CDS B479_07695 NC_019905.1 1712945 1713814 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein complement(1712945..1713814) Pseudomonas putida HB3267 14287946 YP_007228399.1 CDS B479_07700 NC_019905.1 1713969 1715345 D COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; GntR family transcriptional regulator 1713969..1715345 Pseudomonas putida HB3267 14287947 YP_007228400.1 CDS B479_07705 NC_019905.1 1715692 1716732 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(1715692..1716732) Pseudomonas putida HB3267 14287948 YP_007228401.1 CDS B479_07710 NC_019905.1 1716737 1717855 R COG0388 Predicted amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(1716737..1717855) Pseudomonas putida HB3267 14287949 YP_007228402.1 CDS B479_07715 NC_019905.1 1718047 1720083 D COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; NADH:flavin oxidoreductase 1718047..1720083 Pseudomonas putida HB3267 14287950 YP_007228403.1 CDS B479_07720 NC_019905.1 1720237 1721127 D COG2515 1-aminocyclopropane-1-carboxylate deaminase; 1-aminocyclopropane-1-carboxylate deaminase 1720237..1721127 Pseudomonas putida HB3267 14287951 YP_007228404.1 CDS B479_07725 NC_019905.1 1721118 1721663 R COG3038 Cytochrome B561; cytochrome B561 complement(1721118..1721663) Pseudomonas putida HB3267 14287952 YP_007228405.1 CDS B479_07730 NC_019905.1 1721826 1722755 R COG3782 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1721826..1722755) Pseudomonas putida HB3267 14287953 YP_007228406.1 CDS ppnK NC_019905.1 1722847 1723737 D COG0061 Predicted sugar kinase; inorganic polyphosphate/ATP-NAD kinase 1722847..1723737 Pseudomonas putida HB3267 14287954 YP_007228407.1 CDS B479_07740 NC_019905.1 1723737 1724708 D COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases; metallophosphoesterase 1723737..1724708 Pseudomonas putida HB3267 14287955 YP_007228408.1 CDS B479_07745 NC_019905.1 1724705 1725592 D COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid); rhomboid family protein 1724705..1725592 Pseudomonas putida HB3267 14287956 YP_007228409.1 CDS B479_07750 NC_019905.1 1725606 1725866 D COG3139 Uncharacterized protein conserved in bacteria; hypothetical protein 1725606..1725866 Pseudomonas putida HB3267 14287957 YP_007228410.1 CDS B479_07755 NC_019905.1 1725863 1726693 D hypothetical protein 1725863..1726693 Pseudomonas putida HB3267 14287958 YP_007228411.1 CDS pepN NC_019905.1 1726707 1729364 D COG0308 Aminopeptidase N; aminopeptidase N 1726707..1729364 Pseudomonas putida HB3267 14287959 YP_007228412.1 CDS B479_07765 NC_019905.1 1729654 1730673 D COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor; hypothetical protein 1729654..1730673 Pseudomonas putida HB3267 14287960 YP_007228413.1 CDS B479_07770 NC_019905.1 1730670 1733069 D COG1033 Predicted exporters of the RND superfamily; hypothetical protein 1730670..1733069 Pseudomonas putida HB3267 14287961 YP_007228414.1 CDS B479_07775 NC_019905.1 1733205 1733495 D hypothetical protein 1733205..1733495 Pseudomonas putida HB3267 14287962 YP_007228415.1 CDS B479_07780 NC_019905.1 1733500 1734591 D COG2706 3-carboxymuconate cyclase; hypothetical protein 1733500..1734591 Pseudomonas putida HB3267 14287963 YP_007228416.1 CDS B479_07785 NC_019905.1 1734805 1735380 R COG0625 Glutathione S-transferase; glutathione S-transferase domain-containing protein complement(1734805..1735380) Pseudomonas putida HB3267 14287964 YP_007228417.1 CDS B479_07790 NC_019905.1 1735377 1739021 R COG0419 ATPase involved in DNA repair; SMC domain-containing protein complement(1735377..1739021) Pseudomonas putida HB3267 14287965 YP_007228418.1 CDS B479_07795 NC_019905.1 1739018 1740256 R COG0420 DNA repair exonuclease; nuclease SbcCD subunit D complement(1739018..1740256) Pseudomonas putida HB3267 14287966 YP_007228419.1 CDS B479_07810 NC_019905.1 1744818 1745306 D hypothetical protein 1744818..1745306 Pseudomonas putida HB3267 14287967 YP_007228420.1 CDS B479_07815 NC_019905.1 1745474 1745725 D YD repeat-containing protein 1745474..1745725 Pseudomonas putida HB3267 14287968 YP_007228421.1 CDS B479_07820 NC_019905.1 1745895 1746326 D hypothetical protein 1745895..1746326 Pseudomonas putida HB3267 14287969 YP_007228422.1 CDS B479_07825 NC_019905.1 1746528 1746686 R hypothetical protein complement(1746528..1746686) Pseudomonas putida HB3267 14287970 YP_007228423.1 CDS B479_07830 NC_019905.1 1747337 1748971 R hypothetical protein complement(1747337..1748971) Pseudomonas putida HB3267 14287971 YP_007228424.1 CDS B479_07835 NC_019905.1 1748968 1750686 R COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; hypothetical protein complement(1748968..1750686) Pseudomonas putida HB3267 14287972 YP_007228425.1 CDS B479_07840 NC_019905.1 1750683 1751759 R COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; von Willebrand factor type A complement(1750683..1751759) Pseudomonas putida HB3267 14287973 YP_007228426.1 CDS B479_07845 NC_019905.1 1751752 1752246 R hypothetical protein complement(1751752..1752246) Pseudomonas putida HB3267 14287974 YP_007228427.1 CDS B479_07850 NC_019905.1 1752260 1753204 R COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain); hypothetical protein complement(1752260..1753204) Pseudomonas putida HB3267 14287975 YP_007228428.1 CDS B479_07855 NC_019905.1 1753209 1754168 R COG0714 MoxR-like ATPases; ATPase complement(1753209..1754168) Pseudomonas putida HB3267 14287976 YP_007228429.1 CDS B479_07860 NC_019905.1 1754400 1755707 D hypothetical protein 1754400..1755707 Pseudomonas putida HB3267 14287977 YP_007228430.1 CDS B479_07865 NC_019905.1 1755796 1756992 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily protein complement(1755796..1756992) Pseudomonas putida HB3267 14287978 YP_007228431.1 CDS B479_07870 NC_019905.1 1757052 1758206 R COG3135 Uncharacterized protein involved in benzoate metabolism; benzoate transporter complement(1757052..1758206) Pseudomonas putida HB3267 14287979 YP_007228432.1 CDS B479_07875 NC_019905.1 1758369 1759880 D COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; aminotransferase domain-containing GntR family transcriptional regulator 1758369..1759880 Pseudomonas putida HB3267 14287980 YP_007228433.1 CDS B479_07880 NC_019905.1 1759918 1760805 R COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthetase complement(1759918..1760805) Pseudomonas putida HB3267 14287981 YP_007228434.1 CDS B479_07885 NC_019905.1 1760850 1761632 R COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; class II aldolase/adducin domain protein complement(1760850..1761632) Pseudomonas putida HB3267 14287982 YP_007228435.1 CDS B479_07890 NC_019905.1 1761920 1763416 D COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; long-chain-fatty-acid--CoA ligase 1761920..1763416 Pseudomonas putida HB3267 14287983 YP_007228436.1 CDS B479_07895 NC_019905.1 1763431 1764597 D COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase 1763431..1764597 Pseudomonas putida HB3267 14287984 YP_007228437.1 CDS B479_07900 NC_019905.1 1764700 1765953 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 1764700..1765953 Pseudomonas putida HB3267 14287985 YP_007228438.1 CDS B479_07905 NC_019905.1 1765859 1766908 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(1765859..1766908) Pseudomonas putida HB3267 14287986 YP_007228439.1 CDS B479_07910 NC_019905.1 1767295 1768977 D hypothetical protein 1767295..1768977 Pseudomonas putida HB3267 14287987 YP_007228440.1 CDS B479_07915 NC_019905.1 1769000 1770310 D hypothetical protein 1769000..1770310 Pseudomonas putida HB3267 14287988 YP_007228441.1 CDS B479_07920 NC_019905.1 1770310 1770696 D COG2149 Predicted membrane protein; hypothetical protein 1770310..1770696 Pseudomonas putida HB3267 14287989 YP_007228442.1 CDS B479_07925 NC_019905.1 1770689 1770982 D hypothetical protein 1770689..1770982 Pseudomonas putida HB3267 14287990 YP_007228443.1 CDS B479_07930 NC_019905.1 1771065 1773026 R COG2015 Alkyl sulfatase and related hydrolases; beta-lactamase domain-containing protein complement(1771065..1773026) Pseudomonas putida HB3267 14287991 YP_007228444.1 CDS B479_07935 NC_019905.1 1773128 1774033 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(1773128..1774033) Pseudomonas putida HB3267 14287992 YP_007228445.1 CDS B479_07940 NC_019905.1 1774135 1775373 D COG1250 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase 1774135..1775373 Pseudomonas putida HB3267 14287993 YP_007228446.1 CDS B479_07945 NC_019905.1 1775370 1777145 D COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase 1775370..1777145 Pseudomonas putida HB3267 14287994 YP_007228447.1 CDS B479_07950 NC_019905.1 1777176 1778339 D COG1454 Alcohol dehydrogenase, class IV; Alcohol dehydrogenase, iron-containing 1777176..1778339 Pseudomonas putida HB3267 14287995 YP_007228448.1 CDS B479_07955 NC_019905.1 1778339 1778791 D COG0824 Predicted thioesterase; Thioesterase superfamily protein 1778339..1778791 Pseudomonas putida HB3267 14287996 YP_007228449.1 CDS B479_07960 NC_019905.1 1778788 1779972 D COG0183 Acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 1778788..1779972 Pseudomonas putida HB3267 14287997 YP_007228450.1 CDS B479_07965 NC_019905.1 1780068 1780928 R COG2340 Uncharacterized protein with SCP/PR1 domains; hypothetical protein complement(1780068..1780928) Pseudomonas putida HB3267 14287998 YP_007228451.1 CDS B479_07970 NC_019905.1 1781072 1781368 D hypothetical protein 1781072..1781368 Pseudomonas putida HB3267 14287999 YP_007228452.1 CDS B479_07975 NC_019905.1 1781543 1781977 R COG0789 Predicted transcriptional regulators; MerR family transcriptional regulator complement(1781543..1781977) Pseudomonas putida HB3267 14288000 YP_007228453.1 CDS B479_07980 NC_019905.1 1782129 1783181 D COG0845 Membrane-fusion protein; RND family efflux transporter MFP subunit 1782129..1783181 Pseudomonas putida HB3267 14288001 YP_007228454.1 CDS B479_07985 NC_019905.1 1783178 1786258 D COG0841 Cation/multidrug efflux pump; acriflavin resistance protein 1783178..1786258 Pseudomonas putida HB3267 14288002 YP_007228455.1 CDS B479_07990 NC_019905.1 1786458 1787195 R COG2188 Transcriptional regulators; GntR family transcriptional regulator complement(1786458..1787195) Pseudomonas putida HB3267 14288003 YP_007228456.1 CDS B479_07995 NC_019905.1 1787254 1787697 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; N-acetyltransferase GCN5 complement(1787254..1787697) Pseudomonas putida HB3267 14288004 YP_007228457.1 CDS B479_08000 NC_019905.1 1787932 1789164 R COG0019 Diaminopimelate decarboxylase; diaminopimelate decarboxylase complement(1787932..1789164) Pseudomonas putida HB3267 14288005 YP_007228458.1 CDS B479_08005 NC_019905.1 1789289 1790194 D COG0583 Transcriptional regulator; DNA-binding transcriptional regulator LysR 1789289..1790194 Pseudomonas putida HB3267 14288006 YP_007228459.1 CDS B479_08010 NC_019905.1 1790354 1790707 R hypothetical protein complement(1790354..1790707) Pseudomonas putida HB3267 14288007 YP_007228460.1 CDS B479_08015 NC_019905.1 1790982 1795847 D COG2902 NAD-specific glutamate dehydrogenase; NAD-glutamate dehydrogenase 1790982..1795847 Pseudomonas putida HB3267 14288008 YP_007228461.1 CDS B479_08020 NC_019905.1 1795978 1796796 R COG1806 Uncharacterized protein conserved in bacteria; PEP synthetase regulatory protein complement(1795978..1796796) Pseudomonas putida HB3267 14288009 YP_007228462.1 CDS B479_08025 NC_019905.1 1796974 1799349 D COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; phosphoenolpyruvate synthase 1796974..1799349 Pseudomonas putida HB3267 14288010 YP_007228463.1 CDS B479_08030 NC_019905.1 1799452 1800444 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta fold family hydrolase 1799452..1800444 Pseudomonas putida HB3267 14288011 YP_007228464.1 CDS B479_08035 NC_019905.1 1800658 1801149 D COG0684 Demethylmenaquinone methyltransferase; ribonuclease activity regulator protein RraA 1800658..1801149 Pseudomonas putida HB3267 14288012 YP_007228465.1 CDS B479_08040 NC_019905.1 1801177 1802172 D COG0598 Mg2+ and Co2+ transporters; Mg2 transporter protein CorA family protein 1801177..1802172 Pseudomonas putida HB3267 14288013 YP_007228466.1 CDS B479_08045 NC_019905.1 1802387 1802659 D hypothetical protein 1802387..1802659 Pseudomonas putida HB3267 14288014 YP_007228467.1 CDS B479_08050 NC_019905.1 1802662 1803486 D COG0668 Small-conductance mechanosensitive channel; TM helix repeat-containing protein 1802662..1803486 Pseudomonas putida HB3267 14288015 YP_007228468.1 CDS B479_08055 NC_019905.1 1803599 1804165 D COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; RNA polymerase sigma factor SigX 1803599..1804165 Pseudomonas putida HB3267 14288016 YP_007228469.1 CDS B479_08060 NC_019905.1 1804277 1805314 D COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; OmpF family protein 1804277..1805314 Pseudomonas putida HB3267 14288017 YP_007228470.1 CDS B479_08065 NC_019905.1 1805504 1806244 R COG0007 Uroporphyrinogen-III methylase; uroporphyrin-III C-methyltransferase complement(1805504..1806244) Pseudomonas putida HB3267 14288018 YP_007228471.1 CDS B479_08070 NC_019905.1 1806272 1807942 R COG0631 Serine/threonine protein phosphatase; serine/threonine-protein kinase complement(1806272..1807942) Pseudomonas putida HB3267 14288019 YP_007228472.1 CDS B479_08075 NC_019905.1 1807952 1809163 R COG2223 Nitrate/nitrite transporter; nitrite transporter complement(1807952..1809163) Pseudomonas putida HB3267 14288020 YP_007228473.1 CDS B479_08080 NC_019905.1 1809473 1810048 R COG3707 Response regulator with putative antiterminator output domain; response regulator receiver/ANTAR domain-containing protein complement(1809473..1810048) Pseudomonas putida HB3267 14288021 YP_007228474.1 CDS B479_08085 NC_019905.1 1810061 1811275 R COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components; putative nitrate-binding protein NasS complement(1810061..1811275) Pseudomonas putida HB3267 14288022 YP_007228475.1 CDS B479_08090 NC_019905.1 1811555 1812580 D COG0167 Dihydroorotate dehydrogenase; dihydroorotate dehydrogenase 2 1811555..1812580 Pseudomonas putida HB3267 14288023 YP_007228476.1 CDS B479_08095 NC_019905.1 1812675 1812890 R COG3130 Ribosome modulation factor; ribosome modulation factor complement(1812675..1812890) Pseudomonas putida HB3267 14288024 YP_007228477.1 CDS rlmL NC_019905.1 1813452 1815644 D COG0116 Predicted N6-adenine-specific DNA methylase; 23S rRNA m(2)G2445 methyltransferase 1813452..1815644 Pseudomonas putida HB3267 14288025 YP_007228478.1 CDS B479_08105 NC_019905.1 1815739 1818129 D COG2202 FOG: PAS/PAC domain; PAS/PAC sensor-containing diguanylate cyclase 1815739..1818129 Pseudomonas putida HB3267 14288026 YP_007228479.1 CDS B479_08110 NC_019905.1 1818266 1819723 R COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase complement(1818266..1819723) Pseudomonas putida HB3267 14288027 YP_007228480.1 CDS B479_08115 NC_019905.1 1819910 1820254 R COG3171 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1819910..1820254) Pseudomonas putida HB3267 14288028 YP_007228481.1 CDS B479_08120 NC_019905.1 1820296 1823928 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; PAS/PAC sensor hybrid histidine kinase complement(1820296..1823928) Pseudomonas putida HB3267 14288029 YP_007228482.1 CDS B479_08125 NC_019905.1 1823937 1824554 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; two component LuxR family transcriptional regulator complement(1823937..1824554) Pseudomonas putida HB3267 14288030 YP_007228483.1 CDS B479_08130 NC_019905.1 1824838 1826169 R COG0232 dGTP triphosphohydrolase; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(1824838..1826169) Pseudomonas putida HB3267 14288031 YP_007228484.1 CDS B479_08135 NC_019905.1 1826315 1826644 R hypothetical protein complement(1826315..1826644) Pseudomonas putida HB3267 14288032 YP_007228485.1 CDS B479_08140 NC_019905.1 1826641 1827015 R COG5393 Predicted membrane protein; hypothetical protein complement(1826641..1827015) Pseudomonas putida HB3267 14288033 YP_007228486.1 CDS B479_08145 NC_019905.1 1827025 1827339 R COG4575 Uncharacterized conserved protein; hypothetical protein complement(1827025..1827339) Pseudomonas putida HB3267 14288034 YP_007228487.1 CDS B479_08150 NC_019905.1 1827653 1828861 D COG0004 Ammonia permease; Rh family protein/ammonium transporter 1827653..1828861 Pseudomonas putida HB3267 14288035 YP_007228488.1 CDS B479_08155 NC_019905.1 1828933 1829172 D COG0526 Thiol-disulfide isomerase and thioredoxins; glutaredoxin 1828933..1829172 Pseudomonas putida HB3267 14288036 YP_007228489.1 CDS B479_08160 NC_019905.1 1829281 1829712 D COG3108 Uncharacterized protein conserved in bacteria; peptidase M15A 1829281..1829712 Pseudomonas putida HB3267 14288037 YP_007228490.1 CDS B479_08165 NC_019905.1 1829778 1830086 D hypothetical protein 1829778..1830086 Pseudomonas putida HB3267 14288038 YP_007228491.1 CDS B479_08170 NC_019905.1 1830138 1831022 D COG0564 Pseudouridylate synthases, 23S RNA-specific; pseudouridine synthase 1830138..1831022 Pseudomonas putida HB3267 14288039 YP_007228492.1 CDS B479_08175 NC_019905.1 1831158 1832723 R COG2202 FOG: PAS/PAC domain; methyl-accepting chemotaxis sensory transducer complement(1831158..1832723) Pseudomonas putida HB3267 14288040 YP_007228493.1 CDS acnA NC_019905.1 1833778 1836519 R COG1048 Aconitase A; aconitate hydratase complement(1833778..1836519) Pseudomonas putida HB3267 14288041 YP_007228494.1 CDS B479_08195 NC_019905.1 1836736 1837800 D COG2933 Predicted SAM-dependent methyltransferase; 23S rRNA C2498 ribose 2'-O-ribose methyltransferase 1836736..1837800 Pseudomonas putida HB3267 14288042 YP_007228495.1 CDS B479_08200 NC_019905.1 1838024 1838266 D COG0425 Predicted redox protein, regulator of disulfide bond formation; sulfur transfer protein SirA 1838024..1838266 Pseudomonas putida HB3267 14288043 YP_007228496.1 CDS B479_08205 NC_019905.1 1838327 1839469 D COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; erythronate-4-phosphate dehydrogenase 1838327..1839469 Pseudomonas putida HB3267 14288044 YP_007228497.1 CDS B479_08210 NC_019905.1 1839564 1839737 R hypothetical protein complement(1839564..1839737) Pseudomonas putida HB3267 14288045 YP_007228498.1 CDS B479_08215 NC_019905.1 1839950 1841713 D COG1132 ABC-type multidrug transport system, ATPase and permease components; lipid ABC transporter ATPase/inner membrane protein 1839950..1841713 Pseudomonas putida HB3267 14288046 YP_007228499.1 CDS B479_08220 NC_019905.1 1841906 1843522 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1841906..1843522 Pseudomonas putida HB3267 14288047 YP_007228500.1 CDS B479_08225 NC_019905.1 1843836 1845410 D COG0579 Predicted dehydrogenase; malate:quinone oxidoreductase 1843836..1845410 Pseudomonas putida HB3267 14288048 YP_007228501.1 CDS B479_08230 NC_019905.1 1845757 1845978 R putative lipoprotein complement(1845757..1845978) Pseudomonas putida HB3267 14291741 YP_007228502.1 CDS B479_08235 NC_019905.1 1846167 1846706 D COG0521 Molybdopterin biosynthesis enzymes; molybdenum cofactor biosynthesis protein B 1846167..1846706 Pseudomonas putida HB3267 14288050 YP_007228503.1 CDS B479_08240 NC_019905.1 1846699 1847916 D COG0303 Molybdopterin biosynthesis enzyme; molybdopterin biosynthesis MoeA protein 1846699..1847916 Pseudomonas putida HB3267 14288051 YP_007228504.1 CDS B479_08245 NC_019905.1 1847905 1849152 R COG0438 Glycosyltransferase; group 1 glycosyl transferase complement(1847905..1849152) Pseudomonas putida HB3267 14288052 YP_007228505.1 CDS B479_08250 NC_019905.1 1849498 1850385 D COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase; lipid kinase 1849498..1850385 Pseudomonas putida HB3267 14288053 YP_007228506.1 CDS B479_08255 NC_019905.1 1850369 1851028 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; two component LuxR family transcriptional regulator complement(1850369..1851028) Pseudomonas putida HB3267 14288054 YP_007228507.1 CDS B479_08260 NC_019905.1 1851018 1851890 R COG4564 Signal transduction histidine kinase; sensor histidine kinase complement(1851018..1851890) Pseudomonas putida HB3267 14288055 YP_007228508.1 CDS B479_08265 NC_019905.1 1852290 1852799 R putative CheA signal transduction histidine kinase complement(1852290..1852799) Pseudomonas putida HB3267 14288056 YP_007228509.1 CDS B479_08270 NC_019905.1 1853150 1854085 D COG0835 Chemotaxis signal transduction protein; response regulator receiver modulated CheW protein 1853150..1854085 Pseudomonas putida HB3267 14288057 YP_007228510.1 CDS B479_08275 NC_019905.1 1854142 1854945 D COG3217 Uncharacterized Fe-S protein; MOSC domain-containing protein 1854142..1854945 Pseudomonas putida HB3267 14288058 YP_007228511.1 CDS B479_08280 NC_019905.1 1855013 1856938 R COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); lytic transglycosylase complement(1855013..1856938) Pseudomonas putida HB3267 14288059 YP_007228512.1 CDS B479_08285 NC_019905.1 1857160 1859088 D COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein 1857160..1859088 Pseudomonas putida HB3267 14288060 YP_007228513.1 CDS B479_08290 NC_019905.1 1859214 1859654 R COG0589 Universal stress protein UspA and related nucleotide-binding proteins; UspA domain-containing protein complement(1859214..1859654) Pseudomonas putida HB3267 14288061 YP_007228514.1 CDS B479_08295 NC_019905.1 1859765 1860202 D hypothetical protein 1859765..1860202 Pseudomonas putida HB3267 14288062 YP_007228515.1 CDS fadB NC_019905.1 1860848 1862995 D COG1024 Enoyl-CoA hydratase/carnithine racemase; multifunctional fatty acid oxidation complex subunit alpha 1860848..1862995 Pseudomonas putida HB3267 14288063 YP_007228516.1 CDS fadA NC_019905.1 1863027 1864202 D COG0183 Acetyl-CoA acetyltransferase; 3-ketoacyl-CoA thiolase 1863027..1864202 Pseudomonas putida HB3267 14288064 YP_007228517.1 CDS B479_08310 NC_019905.1 1864280 1864531 D COG4728 Uncharacterized protein conserved in bacteria; hypothetical protein 1864280..1864531 Pseudomonas putida HB3267 14288065 YP_007228518.1 CDS B479_08315 NC_019905.1 1864632 1867241 D COG0550 Topoisomerase IA; DNA topoisomerase I subunit omega 1864632..1867241 Pseudomonas putida HB3267 14288066 YP_007228519.1 CDS B479_08320 NC_019905.1 1868066 1868299 D hypothetical protein 1868066..1868299 Pseudomonas putida HB3267 14288067 YP_007228520.1 CDS B479_08325 NC_019905.1 1868349 1868825 R COG5404 SOS-response cell division inhibitor, blocks FtsZ ring formation; cell division inhibitor complement(1868349..1868825) Pseudomonas putida HB3267 14288068 YP_007228521.1 CDS B479_08330 NC_019905.1 1868839 1869447 R COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); LexA repressor complement(1868839..1869447) Pseudomonas putida HB3267 14288069 YP_007228522.1 CDS B479_08335 NC_019905.1 1869663 1870376 D COG1309 Transcriptional regulator; TetR family transcriptional regulator 1869663..1870376 Pseudomonas putida HB3267 14288070 YP_007228523.1 CDS B479_08340 NC_019905.1 1870417 1870941 D COG1376 Uncharacterized protein conserved in bacteria; ErfK/YbiS/YcfS/YnhG family protein 1870417..1870941 Pseudomonas putida HB3267 14288071 YP_007228524.1 CDS B479_08345 NC_019905.1 1870952 1871962 D COG1472 Beta-glucosidase-related glycosidases; beta-hexosaminidase 1870952..1871962 Pseudomonas putida HB3267 14288072 YP_007228525.1 CDS B479_08350 NC_019905.1 1872145 1873155 D COG1472 Beta-glucosidase-related glycosidases; beta-hexosaminidase 1872145..1873155 Pseudomonas putida HB3267 14288073 YP_007228526.1 CDS B479_08355 NC_019905.1 1873282 1876590 R COG4715 Uncharacterized conserved protein; non-specific serine/threonine protein kinase complement(1873282..1876590) Pseudomonas putida HB3267 14288074 YP_007228527.1 CDS B479_08360 NC_019905.1 1876595 1877167 R hypothetical protein complement(1876595..1877167) Pseudomonas putida HB3267 14288075 YP_007228528.1 CDS B479_08365 NC_019905.1 1877177 1880626 R COG1197 Transcription-repair coupling factor (superfamily II helicase); transcription-repair coupling factor complement(1877177..1880626) Pseudomonas putida HB3267 14288076 YP_007228529.1 CDS B479_08370 NC_019905.1 1880809 1882257 D COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 1880809..1882257 Pseudomonas putida HB3267 14288077 YP_007228530.1 CDS B479_08375 NC_019905.1 1882495 1883466 D COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; ApbE family lipoprotein 1882495..1883466 Pseudomonas putida HB3267 14288078 YP_007228531.1 CDS B479_08380 NC_019905.1 1883669 1885063 D COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; soluble pyridine nucleotide transhydrogenase 1883669..1885063 Pseudomonas putida HB3267 14288079 YP_007228532.1 CDS B479_08385 NC_019905.1 1885106 1885828 R COG0584 Glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(1885106..1885828) Pseudomonas putida HB3267 14288080 YP_007228533.1 CDS B479_08390 NC_019905.1 1885860 1886444 R type IV pilus assembly PilZ complement(1885860..1886444) Pseudomonas putida HB3267 14288081 YP_007228534.1 CDS B479_08395 NC_019905.1 1886538 1887788 D COG4591 ABC-type transport system, involved in lipoprotein release, permease component; LolC/E family lipoprotein releasing system, transmembrane protein 1886538..1887788 Pseudomonas putida HB3267 14288082 YP_007228535.1 CDS lolD NC_019905.1 1887781 1888479 D COG1136 ABC-type antimicrobial peptide transport system, ATPase component; lipoprotein transporter ATP-binding subunit 1887781..1888479 Pseudomonas putida HB3267 14288083 YP_007228536.1 CDS B479_08405 NC_019905.1 1888541 1889782 D COG4591 ABC-type transport system, involved in lipoprotein release, permease component; LolC/E family lipoprotein releasing system, transmembrane protein 1888541..1889782 Pseudomonas putida HB3267 14288084 YP_007228537.1 CDS B479_08410 NC_019905.1 1890001 1891350 R COG0642 Signal transduction histidine kinase; heavy metal sensor signal transduction histidine kinase complement(1890001..1891350) Pseudomonas putida HB3267 14288085 YP_007228538.1 CDS B479_08415 NC_019905.1 1891350 1892030 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component heavy metal response transcriptional regulator complement(1891350..1892030) Pseudomonas putida HB3267 14288086 YP_007228539.1 CDS queF NC_019905.1 1892295 1893125 D COG2904 Uncharacterized protein conserved in bacteria; 7-cyano-7-deazaguanine reductase 1892295..1893125 Pseudomonas putida HB3267 14288087 YP_007228540.1 CDS B479_08425 NC_019905.1 1893272 1893535 R hypothetical protein complement(1893272..1893535) Pseudomonas putida HB3267 14288088 YP_007228541.1 CDS B479_08430 NC_019905.1 1893658 1894221 R COG0637 Predicted phosphatase/phosphohexomutase; hypothetical protein complement(1893658..1894221) Pseudomonas putida HB3267 14288089 YP_007228542.1 CDS B479_08435 NC_019905.1 1894422 1895129 D COG2853 Surface lipoprotein; VacJ family lipoprotein 1894422..1895129 Pseudomonas putida HB3267 14288090 YP_007228543.1 CDS B479_08440 NC_019905.1 1895297 1895596 R type IV pilus assembly PilZ complement(1895297..1895596) Pseudomonas putida HB3267 14288091 YP_007228544.1 CDS B479_08445 NC_019905.1 1895878 1897062 D COG0784 FOG: CheY-like receiver; response regulator receiver modulated serine phosphatase 1895878..1897062 Pseudomonas putida HB3267 14288092 YP_007228545.1 CDS B479_08450 NC_019905.1 1897059 1897541 D COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); anti-sigma-factor antagonist 1897059..1897541 Pseudomonas putida HB3267 14288093 YP_007228546.1 CDS B479_08455 NC_019905.1 1897808 1899640 R hypothetical protein complement(1897808..1899640) Pseudomonas putida HB3267 14288094 YP_007228547.1 CDS B479_08460 NC_019905.1 1899878 1900804 R COG0176 Transaldolase; transaldolase B complement(1899878..1900804) Pseudomonas putida HB3267 14288095 YP_007228548.1 CDS B479_08465 NC_019905.1 1901100 1902110 R COG0042 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase A complement(1901100..1902110) Pseudomonas putida HB3267 14288096 YP_007228549.1 CDS B479_08470 NC_019905.1 1902210 1903337 D COG0582 Integrase; integrase family protein 1902210..1903337 Pseudomonas putida HB3267 14288097 YP_007228550.1 CDS B479_08475 NC_019905.1 1903321 1903599 R hypothetical protein complement(1903321..1903599) Pseudomonas putida HB3267 14288098 YP_007228551.1 CDS B479_08480 NC_019905.1 1903653 1903865 R hypothetical protein complement(1903653..1903865) Pseudomonas putida HB3267 14288099 YP_007228552.1 CDS B479_08485 NC_019905.1 1903876 1905177 R hypothetical protein complement(1903876..1905177) Pseudomonas putida HB3267 14288100 YP_007228553.1 CDS B479_08490 NC_019905.1 1905338 1907272 R COG0270 Site-specific DNA methylase; C-5 cytosine-specific DNA methylase complement(1905338..1907272) Pseudomonas putida HB3267 14288101 YP_007228554.1 CDS B479_08495 NC_019905.1 1907345 1907956 R hypothetical protein complement(1907345..1907956) Pseudomonas putida HB3267 14288102 YP_007228555.1 CDS B479_08500 NC_019905.1 1908268 1908579 R hypothetical protein complement(1908268..1908579) Pseudomonas putida HB3267 14288103 YP_007228556.1 CDS B479_08505 NC_019905.1 1908621 1908815 R hypothetical protein complement(1908621..1908815) Pseudomonas putida HB3267 14288104 YP_007228557.1 CDS B479_08510 NC_019905.1 1908819 1909484 R COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; exodeoxyribonuclease X complement(1908819..1909484) Pseudomonas putida HB3267 14288105 YP_007228558.1 CDS B479_08515 NC_019905.1 1909548 1910201 R hypothetical protein complement(1909548..1910201) Pseudomonas putida HB3267 14288106 YP_007228559.1 CDS B479_08520 NC_019905.1 1910213 1910845 R hypothetical protein complement(1910213..1910845) Pseudomonas putida HB3267 14288107 YP_007228560.1 CDS B479_08525 NC_019905.1 1911121 1911315 R hypothetical protein complement(1911121..1911315) Pseudomonas putida HB3267 14288108 YP_007228561.1 CDS B479_08530 NC_019905.1 1911312 1911542 R hypothetical protein complement(1911312..1911542) Pseudomonas putida HB3267 14288109 YP_007228562.1 CDS B479_08535 NC_019905.1 1911539 1911793 R hypothetical protein complement(1911539..1911793) Pseudomonas putida HB3267 14288110 YP_007228563.1 CDS B479_08540 NC_019905.1 1912044 1912406 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; hypothetical protein complement(1912044..1912406) Pseudomonas putida HB3267 14288111 YP_007228564.1 CDS B479_08545 NC_019905.1 1912901 1913104 R hypothetical protein complement(1912901..1913104) Pseudomonas putida HB3267 14288112 YP_007228565.1 CDS B479_08550 NC_019905.1 1913136 1913483 R hypothetical protein complement(1913136..1913483) Pseudomonas putida HB3267 14288113 YP_007228566.1 CDS B479_08555 NC_019905.1 1914003 1914263 R hypothetical protein complement(1914003..1914263) Pseudomonas putida HB3267 14288114 YP_007228567.1 CDS B479_08560 NC_019905.1 1914265 1914939 R cI repressor protein complement(1914265..1914939) Pseudomonas putida HB3267 14288115 YP_007228568.1 CDS B479_08565 NC_019905.1 1915054 1915251 D prophage Pfl 6 Cro repressor 1915054..1915251 Pseudomonas putida HB3267 14288116 YP_007228569.1 CDS B479_08570 NC_019905.1 1915283 1915477 D hypothetical protein 1915283..1915477 Pseudomonas putida HB3267 14288117 YP_007228570.1 CDS B479_08575 NC_019905.1 1915516 1915713 D hypothetical protein 1915516..1915713 Pseudomonas putida HB3267 14288118 YP_007228571.1 CDS B479_08580 NC_019905.1 1915830 1916774 D phage replication protein O 1915830..1916774 Pseudomonas putida HB3267 14288119 YP_007228572.1 CDS B479_08585 NC_019905.1 1916771 1918111 D COG0305 Replicative DNA helicase; replicative DNA helicase 1916771..1918111 Pseudomonas putida HB3267 14288120 YP_007228573.1 CDS B479_08590 NC_019905.1 1918111 1918764 D hypothetical protein 1918111..1918764 Pseudomonas putida HB3267 14288121 YP_007228574.1 CDS B479_08595 NC_019905.1 1918832 1919074 D hypothetical protein 1918832..1919074 Pseudomonas putida HB3267 14288122 YP_007228575.1 CDS B479_08600 NC_019905.1 1919074 1919349 D hypothetical protein 1919074..1919349 Pseudomonas putida HB3267 14288123 YP_007228576.1 CDS B479_08605 NC_019905.1 1919346 1919744 D NinB family protein 1919346..1919744 Pseudomonas putida HB3267 14288124 YP_007228577.1 CDS B479_08610 NC_019905.1 1919744 1920346 D bacteriophage lambda NinG family protein 1919744..1920346 Pseudomonas putida HB3267 14288125 YP_007228578.1 CDS B479_08615 NC_019905.1 1920501 1920869 D hypothetical protein 1920501..1920869 Pseudomonas putida HB3267 14288126 YP_007228579.1 CDS B479_08620 NC_019905.1 1921037 1921330 D hypothetical protein 1921037..1921330 Pseudomonas putida HB3267 14288127 YP_007228580.1 CDS B479_08625 NC_019905.1 1921317 1921826 D COG3772 Phage-related lysozyme (muraminidase); glycoside hydrolase 1921317..1921826 Pseudomonas putida HB3267 14288128 YP_007228581.1 CDS B479_08630 NC_019905.1 1921823 1922050 D hypothetical protein 1921823..1922050 Pseudomonas putida HB3267 14288129 YP_007228582.1 CDS B479_08635 NC_019905.1 1922055 1922507 D lysis protein 1922055..1922507 Pseudomonas putida HB3267 14288130 YP_007228583.1 CDS B479_08640 NC_019905.1 1922504 1922749 D hypothetical protein 1922504..1922749 Pseudomonas putida HB3267 14288131 YP_007228584.1 CDS B479_08645 NC_019905.1 1922757 1923299 D COG3728 Phage terminase, small subunit; terminase small subunit 1922757..1923299 Pseudomonas putida HB3267 14288132 YP_007228585.1 CDS B479_08650 NC_019905.1 1923277 1924773 D putative phage terminase large subunit 1923277..1924773 Pseudomonas putida HB3267 14288133 YP_007228586.1 CDS B479_08655 NC_019905.1 1924785 1925048 D hypothetical protein 1924785..1925048 Pseudomonas putida HB3267 14288134 YP_007228587.1 CDS B479_08660 NC_019905.1 1925051 1926745 D putative tail protein 1925051..1926745 Pseudomonas putida HB3267 14288135 YP_007228588.1 CDS B479_08665 NC_019905.1 1926746 1927051 D hypothetical protein 1926746..1927051 Pseudomonas putida HB3267 14288136 YP_007228589.1 CDS B479_08670 NC_019905.1 1927048 1927755 D hypothetical protein 1927048..1927755 Pseudomonas putida HB3267 14288137 YP_007228590.1 CDS B479_08675 NC_019905.1 1927766 1928758 D hypothetical protein 1927766..1928758 Pseudomonas putida HB3267 14288138 YP_007228591.1 CDS B479_08680 NC_019905.1 1928798 1929244 D hypothetical protein 1928798..1929244 Pseudomonas putida HB3267 14288139 YP_007228592.1 CDS B479_08685 NC_019905.1 1929254 1929706 D hypothetical protein 1929254..1929706 Pseudomonas putida HB3267 14288140 YP_007228593.1 CDS B479_08690 NC_019905.1 1929761 1930396 D hypothetical protein 1929761..1930396 Pseudomonas putida HB3267 14288141 YP_007228594.1 CDS B479_08695 NC_019905.1 1930393 1932717 D hypothetical protein 1930393..1932717 Pseudomonas putida HB3267 14288142 YP_007228595.1 CDS B479_08700 NC_019905.1 1932698 1933162 D hypothetical protein 1932698..1933162 Pseudomonas putida HB3267 14288143 YP_007228596.1 CDS B479_08705 NC_019905.1 1933162 1933632 D hypothetical protein 1933162..1933632 Pseudomonas putida HB3267 14288144 YP_007228597.1 CDS B479_08710 NC_019905.1 1933668 1935743 D hypothetical protein 1933668..1935743 Pseudomonas putida HB3267 14288145 YP_007228598.1 CDS B479_08715 NC_019905.1 1935815 1937494 D hypothetical protein 1935815..1937494 Pseudomonas putida HB3267 14288146 YP_007228599.1 CDS B479_08720 NC_019905.1 1937494 1940061 D COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit; hypothetical protein 1937494..1940061 Pseudomonas putida HB3267 14288147 YP_007228600.1 CDS B479_08725 NC_019905.1 1940062 1940319 R hypothetical protein complement(1940062..1940319) Pseudomonas putida HB3267 14288148 YP_007228601.1 CDS B479_08730 NC_019905.1 1940549 1942918 D COG2755 Lysophospholipase L1 and related esterases; hypothetical protein 1940549..1942918 Pseudomonas putida HB3267 14288149 YP_007228602.1 CDS B479_08755 NC_019905.1 1945792 1946214 R COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; hypothetical protein complement(1945792..1946214) Pseudomonas putida HB3267 14288150 YP_007228603.1 CDS B479_08760 NC_019905.1 1947098 1948039 R hypothetical protein complement(1947098..1948039) Pseudomonas putida HB3267 14288151 YP_007228604.1 CDS B479_08765 NC_019905.1 1948214 1948420 R hypothetical protein complement(1948214..1948420) Pseudomonas putida HB3267 14288152 YP_007228605.1 CDS B479_08770 NC_019905.1 1948661 1949278 R hypothetical protein complement(1948661..1949278) Pseudomonas putida HB3267 14288153 YP_007228606.1 CDS B479_08775 NC_019905.1 1949256 1950725 R COG0419 ATPase involved in DNA repair; hypothetical protein complement(1949256..1950725) Pseudomonas putida HB3267 14288154 YP_007228607.1 CDS B479_08780 NC_019905.1 1951292 1952161 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(1951292..1952161) Pseudomonas putida HB3267 14288155 YP_007228608.1 CDS B479_08785 NC_019905.1 1952567 1953604 D COG3000 Sterol desaturase; sterol desaturase 1952567..1953604 Pseudomonas putida HB3267 14288156 YP_007228609.1 CDS B479_08790 NC_019905.1 1953601 1954530 R COG0726 Predicted xylanase/chitin deacetylase; urate catabolism protein complement(1953601..1954530) Pseudomonas putida HB3267 14288157 YP_007228610.1 CDS B479_08795 NC_019905.1 1954530 1955402 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; N-acetyltransferase GCN5 complement(1954530..1955402) Pseudomonas putida HB3267 14288158 YP_007228611.1 CDS B479_08800 NC_019905.1 1955901 1956557 D hypothetical protein 1955901..1956557 Pseudomonas putida HB3267 14288159 YP_007228612.1 CDS B479_08815 NC_019905.1 1961418 1962686 R hypothetical protein complement(1961418..1962686) Pseudomonas putida HB3267 14288160 YP_007228613.1 CDS B479_08820 NC_019905.1 1962711 1963064 R hypothetical protein complement(1962711..1963064) Pseudomonas putida HB3267 14288161 YP_007228614.1 CDS B479_08825 NC_019905.1 1963061 1963396 R COG3575 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1963061..1963396) Pseudomonas putida HB3267 14288162 YP_007228615.1 CDS B479_08830 NC_019905.1 1963685 1963975 D hypothetical protein 1963685..1963975 Pseudomonas putida HB3267 14288163 YP_007228616.1 CDS B479_08835 NC_019905.1 1963972 1964619 D hypothetical protein 1963972..1964619 Pseudomonas putida HB3267 14288164 YP_007228617.1 CDS B479_08840 NC_019905.1 1965054 1965308 D hypothetical protein 1965054..1965308 Pseudomonas putida HB3267 14288165 YP_007228618.1 CDS B479_08845 NC_019905.1 1965412 1965699 D hypothetical protein 1965412..1965699 Pseudomonas putida HB3267 14288166 YP_007228619.1 CDS B479_08850 NC_019905.1 1965875 1966969 D COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; luciferase family protein 1965875..1966969 Pseudomonas putida HB3267 14288167 YP_007228620.1 CDS B479_08855 NC_019905.1 1967063 1967638 D hypothetical protein 1967063..1967638 Pseudomonas putida HB3267 14288168 YP_007228621.1 CDS B479_08860 NC_019905.1 1968106 1968588 D COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; formate dehydrogenase subunit gamma 1968106..1968588 Pseudomonas putida HB3267 14288169 YP_007228622.1 CDS B479_08865 NC_019905.1 1968582 1970141 D COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; NADH dehydrogenase (quinone) 1968582..1970141 Pseudomonas putida HB3267 14288170 YP_007228623.1 CDS B479_08870 NC_019905.1 1970138 1973020 D COG3383 Uncharacterized anaerobic dehydrogenase; formate dehydrogenase subunit alpha 1970138..1973020 Pseudomonas putida HB3267 14288171 YP_007228624.1 CDS B479_08875 NC_019905.1 1973017 1973220 D putative formate dehydrogenase subunit delta 1973017..1973220 Pseudomonas putida HB3267 14288172 YP_007228625.1 CDS B479_08880 NC_019905.1 1973356 1974219 R COG0589 Universal stress protein UspA and related nucleotide-binding proteins; UspA domain-containing protein complement(1973356..1974219) Pseudomonas putida HB3267 14288173 YP_007228626.1 CDS B479_08885 NC_019905.1 1974374 1974991 D COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA; tRNA-hydroxylase 1974374..1974991 Pseudomonas putida HB3267 14288174 YP_007228627.1 CDS B479_08890 NC_019905.1 1975014 1975334 R COG4575 Uncharacterized conserved protein; hypothetical protein complement(1975014..1975334) Pseudomonas putida HB3267 14288175 YP_007228628.1 CDS B479_08895 NC_019905.1 1975464 1975727 D hypothetical protein 1975464..1975727 Pseudomonas putida HB3267 14288176 YP_007228629.1 CDS B479_08900 NC_019905.1 1975746 1976228 R water stress/hypersensitive response domain-containing protein complement(1975746..1976228) Pseudomonas putida HB3267 14288177 YP_007228630.1 CDS B479_08905 NC_019905.1 1976364 1977485 D COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; anti-FecI sigma factor FecR 1976364..1977485 Pseudomonas putida HB3267 14288178 YP_007228631.1 CDS B479_08910 NC_019905.1 1977699 1980125 D COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent siderophore receptor 1977699..1980125 Pseudomonas putida HB3267 14288179 YP_007228632.1 CDS B479_08915 NC_019905.1 1980240 1981130 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(1980240..1981130) Pseudomonas putida HB3267 14288180 YP_007228633.1 CDS B479_08920 NC_019905.1 1981233 1982312 D COG0687 Spermidine/putrescine-binding periplasmic protein; extracellular solute-binding protein 1981233..1982312 Pseudomonas putida HB3267 14288181 YP_007228634.1 CDS B479_08925 NC_019905.1 1982338 1983303 D COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; agmatinase 1982338..1983303 Pseudomonas putida HB3267 14288182 YP_007228635.1 CDS B479_08930 NC_019905.1 1983489 1983806 D hypothetical protein 1983489..1983806 Pseudomonas putida HB3267 14288183 YP_007228636.1 CDS B479_08935 NC_019905.1 1983830 1984978 D COG2133 Glucose/sorbosone dehydrogenases; glucose sorbosone dehydrogenase 1983830..1984978 Pseudomonas putida HB3267 14288184 YP_007228637.1 CDS B479_08940 NC_019905.1 1985108 1986214 D COG1485 Predicted ATPase; AFG1 family ATPase 1985108..1986214 Pseudomonas putida HB3267 14288185 YP_007228638.1 CDS B479_08945 NC_019905.1 1986229 1986810 D COG2318 Uncharacterized protein conserved in bacteria; DinB family protein 1986229..1986810 Pseudomonas putida HB3267 14288186 YP_007228639.1 CDS B479_08950 NC_019905.1 1986986 1987984 R COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold protein complement(1986986..1987984) Pseudomonas putida HB3267 14288187 YP_007228640.1 CDS B479_08955 NC_019905.1 1988060 1988497 R COG1238 Predicted membrane protein; hypothetical protein complement(1988060..1988497) Pseudomonas putida HB3267 14288188 YP_007228641.1 CDS B479_08960 NC_019905.1 1988497 1988925 R COG3019 Predicted metal-binding protein; hypothetical protein complement(1988497..1988925) Pseudomonas putida HB3267 14288189 YP_007228642.1 CDS B479_08965 NC_019905.1 1988940 1989170 R copper resistance protein B complement(1988940..1989170) Pseudomonas putida HB3267 14288190 YP_007228643.1 CDS B479_08970 NC_019905.1 1989195 1989845 D hypothetical protein 1989195..1989845 Pseudomonas putida HB3267 14288191 YP_007228644.1 CDS B479_08975 NC_019905.1 1989861 1991180 R COG0826 Collagenase and related proteases; protease complement(1989861..1991180) Pseudomonas putida HB3267 14288192 YP_007228645.1 CDS B479_08980 NC_019905.1 1991314 1992378 D COG0628 Predicted permease; hypothetical protein 1991314..1992378 Pseudomonas putida HB3267 14288193 YP_007228646.1 CDS B479_08985 NC_019905.1 1992510 1993337 R COG0637 Predicted phosphatase/phosphohexomutase; phosphonoacetaldehyde hydrolase complement(1992510..1993337) Pseudomonas putida HB3267 14288194 YP_007228647.1 CDS B479_08990 NC_019905.1 1993372 1994478 R COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; 2-aminoethylphosphonate--pyruvate transaminase complement(1993372..1994478) Pseudomonas putida HB3267 14288195 YP_007228648.1 CDS B479_08995 NC_019905.1 1994591 1995454 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 1994591..1995454 Pseudomonas putida HB3267 14288196 YP_007228649.1 CDS B479_09000 NC_019905.1 1995512 1996534 D COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator 1995512..1996534 Pseudomonas putida HB3267 14288197 YP_007228650.1 CDS B479_09005 NC_019905.1 1996613 2001121 D COG4886 Leucine-rich repeat (LRR) protein; hypothetical protein 1996613..2001121 Pseudomonas putida HB3267 14288198 YP_007228651.1 CDS B479_09010 NC_019905.1 2001242 2005672 D COG4886 Leucine-rich repeat (LRR) protein; hypothetical protein 2001242..2005672 Pseudomonas putida HB3267 14288199 YP_007228652.1 CDS B479_09015 NC_019905.1 2005795 2007441 D COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; AMP-dependent synthetase and ligase 2005795..2007441 Pseudomonas putida HB3267 14288200 YP_007228653.1 CDS B479_09020 NC_019905.1 2007454 2008221 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain dehydrogenase/reductase SDR 2007454..2008221 Pseudomonas putida HB3267 14288201 YP_007228654.1 CDS B479_09025 NC_019905.1 2008233 2009426 D COG0183 Acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 2008233..2009426 Pseudomonas putida HB3267 14288202 YP_007228655.1 CDS B479_09030 NC_019905.1 2009435 2010562 D COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase family protein 2009435..2010562 Pseudomonas putida HB3267 14288203 YP_007228656.1 CDS B479_09035 NC_019905.1 2010576 2011349 D COG1024 Enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase/isomerase 2010576..2011349 Pseudomonas putida HB3267 14288204 YP_007228657.1 CDS B479_09040 NC_019905.1 2011765 2013066 D COG3385 FOG: Transposase and inactivated derivatives; ISPpu8, transposase 2011765..2013066 Pseudomonas putida HB3267 14288205 YP_007228658.1 CDS B479_09045 NC_019905.1 2013247 2013600 D hypothetical protein 2013247..2013600 Pseudomonas putida HB3267 14288206 YP_007228659.1 CDS B479_09050 NC_019905.1 2013609 2014013 D COG1734 DnaK suppressor protein; TraR/DksA family transcriptional regulator 2013609..2014013 Pseudomonas putida HB3267 14288207 YP_007228660.1 CDS B479_09055 NC_019905.1 2014049 2014192 D hypothetical protein 2014049..2014192 Pseudomonas putida HB3267 14288208 YP_007228661.1 CDS B479_09060 NC_019905.1 2014192 2014383 D hypothetical protein 2014192..2014383 Pseudomonas putida HB3267 14288209 YP_007228662.1 CDS B479_09065 NC_019905.1 2014795 2015265 D hypothetical protein 2014795..2015265 Pseudomonas putida HB3267 14288210 YP_007228663.1 CDS B479_09070 NC_019905.1 2015262 2015474 D hypothetical protein 2015262..2015474 Pseudomonas putida HB3267 14288211 YP_007228664.1 CDS B479_09075 NC_019905.1 2015487 2015852 R COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit; monovalent cation/H+ antiporter subunit G complement(2015487..2015852) Pseudomonas putida HB3267 14288212 YP_007228665.1 CDS B479_09080 NC_019905.1 2015849 2016127 R COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit; monovalent cation/H+ antiporter subunit F complement(2015849..2016127) Pseudomonas putida HB3267 14288213 YP_007228666.1 CDS B479_09085 NC_019905.1 2016124 2016612 R COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit; monovalent cation/H+ antiporter subunit E complement(2016124..2016612) Pseudomonas putida HB3267 14288214 YP_007228667.1 CDS B479_09090 NC_019905.1 2016609 2018288 R COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; monovalent cation/H+ antiporter subunit D complement(2016609..2018288) Pseudomonas putida HB3267 14288215 YP_007228668.1 CDS B479_09095 NC_019905.1 2018285 2018629 R COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit; monovalent cation/H+ antiporter subunit C complement(2018285..2018629) Pseudomonas putida HB3267 14288216 YP_007228669.1 CDS B479_09100 NC_019905.1 2018629 2021544 R COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit; monovalent cation/H+ antiporter subunit A complement(2018629..2021544) Pseudomonas putida HB3267 14288217 YP_007228670.1 CDS B479_09105 NC_019905.1 2021695 2022645 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein complement(2021695..2022645) Pseudomonas putida HB3267 14288218 YP_007228671.1 CDS B479_09110 NC_019905.1 2022729 2023292 D COG1396 Predicted transcriptional regulators; XRE family transcriptional regulator 2022729..2023292 Pseudomonas putida HB3267 14288219 YP_007228672.1 CDS B479_09115 NC_019905.1 2023434 2023982 R COG1335 Amidases related to nicotinamidase; isochorismatase hydrolase complement(2023434..2023982) Pseudomonas putida HB3267 14288220 YP_007228673.1 CDS B479_09120 NC_019905.1 2024065 2025048 D COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; AraC family transcriptional regulator 2024065..2025048 Pseudomonas putida HB3267 14288221 YP_007228674.1 CDS B479_09125 NC_019905.1 2025154 2025534 D hypothetical protein 2025154..2025534 Pseudomonas putida HB3267 14288222 YP_007228675.1 CDS B479_09140 NC_019905.1 2026266 2027384 R hypothetical protein complement(2026266..2027384) Pseudomonas putida HB3267 14288223 YP_007228676.1 CDS B479_09145 NC_019905.1 2027605 2029413 D COG0006 Xaa-Pro aminopeptidase; peptidase M24 2027605..2029413 Pseudomonas putida HB3267 14288224 YP_007228677.1 CDS B479_09150 NC_019905.1 2029455 2029736 R lipoprotein complement(2029455..2029736) Pseudomonas putida HB3267 14288225 YP_007228678.1 CDS B479_09155 NC_019905.1 2029927 2030814 R COG5006 Predicted permease, DMT superfamily; hypothetical protein complement(2029927..2030814) Pseudomonas putida HB3267 14288226 YP_007228679.1 CDS B479_09160 NC_019905.1 2036775 2038583 D COG4178 ABC-type uncharacterized transport system, permease and ATPase components; ABC transporter 2036775..2038583 Pseudomonas putida HB3267 14291779 YP_007228680.1 CDS B479_09165 NC_019905.1 2038580 2039782 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(2038580..2039782) Pseudomonas putida HB3267 14288228 YP_007228681.1 CDS B479_09170 NC_019905.1 2040111 2042345 D COG4771 Outer membrane receptor for ferrienterochelin and colicins; outer membrane receptor FepA 2040111..2042345 Pseudomonas putida HB3267 14288229 YP_007228682.1 CDS B479_09175 NC_019905.1 2042477 2043016 D COG0406 Fructose-2,6-bisphosphatase; phosphoglycerate mutase 2042477..2043016 Pseudomonas putida HB3267 14288230 YP_007228683.1 CDS B479_09180 NC_019905.1 2043020 2043805 R COG0730 Predicted permeases; hypothetical protein complement(2043020..2043805) Pseudomonas putida HB3267 14288231 YP_007228684.1 CDS B479_09185 NC_019905.1 2044024 2044617 R COG1396 Predicted transcriptional regulators; XRE family transcriptional regulator complement(2044024..2044617) Pseudomonas putida HB3267 14288232 YP_007228685.1 CDS B479_09190 NC_019905.1 2044732 2045868 D COG0665 Glycine/D-amino acid oxidases (deaminating); FAD dependent oxidoreductase 2044732..2045868 Pseudomonas putida HB3267 14288233 YP_007228686.1 CDS B479_09195 NC_019905.1 2045881 2046258 D COG0251 Putative translation initiation inhibitor, yjgF family; endoribonuclease L-PSP 2045881..2046258 Pseudomonas putida HB3267 14288234 YP_007228687.1 CDS B479_09200 NC_019905.1 2046409 2047479 D COG3949 Uncharacterized membrane protein; hypothetical protein 2046409..2047479 Pseudomonas putida HB3267 14288235 YP_007228688.1 CDS B479_09205 NC_019905.1 2047637 2049523 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(2047637..2049523) Pseudomonas putida HB3267 14288236 YP_007228689.1 CDS B479_09210 NC_019905.1 2049666 2050544 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2049666..2050544) Pseudomonas putida HB3267 14288237 YP_007228690.1 CDS B479_09215 NC_019905.1 2050646 2051074 D COG4125 Predicted membrane protein; transmembrane pair domain-containing protein 2050646..2051074 Pseudomonas putida HB3267 14288238 YP_007228691.1 CDS B479_09220 NC_019905.1 2051172 2052233 R hypothetical protein complement(2051172..2052233) Pseudomonas putida HB3267 14288239 YP_007228692.1 CDS B479_09225 NC_019905.1 2052426 2053094 R COG1802 Transcriptional regulators; GntR family transcriptional regulator complement(2052426..2053094) Pseudomonas putida HB3267 14288240 YP_007228693.1 CDS B479_09230 NC_019905.1 2053111 2053815 R COG2186 Transcriptional regulators; GntR family transcriptional regulator complement(2053111..2053815) Pseudomonas putida HB3267 14288241 YP_007228694.1 CDS B479_09235 NC_019905.1 2053860 2055170 R COG1301 Na+/H+-dicarboxylate symporters; C4-dicarboxylate transporter DctA complement(2053860..2055170) Pseudomonas putida HB3267 14288242 YP_007228695.1 CDS B479_09240 NC_019905.1 2055676 2057241 D COG2202 FOG: PAS/PAC domain; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 2055676..2057241 Pseudomonas putida HB3267 14288243 YP_007228696.1 CDS B479_09245 NC_019905.1 2057255 2058940 D COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2057255..2058940 Pseudomonas putida HB3267 14288244 YP_007228697.1 CDS B479_09250 NC_019905.1 2058944 2059423 R COG1522 Transcriptional regulators; AsnC family transcriptional regulator complement(2058944..2059423) Pseudomonas putida HB3267 14288245 YP_007228698.1 CDS B479_09255 NC_019905.1 2059586 2060650 R COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog; ornithine cyclodeaminase complement(2059586..2060650) Pseudomonas putida HB3267 14288246 YP_007228699.1 CDS B479_09260 NC_019905.1 2060912 2062660 R COG3284 Transcriptional activator of acetoin/glycerol metabolism; Fis family GAF modulated sigma54 specific transcriptional regulator complement(2060912..2062660) Pseudomonas putida HB3267 14288247 YP_007228700.1 CDS B479_09265 NC_019905.1 2062885 2063979 D COG3839 ABC-type sugar transport systems, ATPase components; sugar ABC transporter ATP-binding protein 2062885..2063979 Pseudomonas putida HB3267 14288248 YP_007228701.1 CDS B479_09270 NC_019905.1 2063979 2065091 D COG3839 ABC-type sugar transport systems, ATPase components; sugar ABC transporter ATP-binding protein 2063979..2065091 Pseudomonas putida HB3267 14288249 YP_007228702.1 CDS B479_09275 NC_019905.1 2065088 2065951 D COG1175 ABC-type sugar transport systems, permease components; binding-protein-dependent transport system inner membrane protein 2065088..2065951 Pseudomonas putida HB3267 14288250 YP_007228703.1 CDS B479_09280 NC_019905.1 2065955 2066755 D COG0395 ABC-type sugar transport system, permease component; binding-protein-dependent transport system inner membrane protein 2065955..2066755 Pseudomonas putida HB3267 14288251 YP_007228704.1 CDS B479_09285 NC_019905.1 2066768 2067040 D COG5477 Predicted small integral membrane protein; small integral membrane protein-like protein 2066768..2067040 Pseudomonas putida HB3267 14288252 YP_007228705.1 CDS B479_09290 NC_019905.1 2067080 2068819 D COG1653 ABC-type sugar transport system, periplasmic component; extracellular solute-binding protein 2067080..2068819 Pseudomonas putida HB3267 14288253 YP_007228706.1 CDS B479_09295 NC_019905.1 2068986 2069840 R COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(2068986..2069840) Pseudomonas putida HB3267 14288254 YP_007228707.1 CDS B479_09300 NC_019905.1 2070638 2070940 R hypothetical protein complement(2070638..2070940) Pseudomonas putida HB3267 14291747 YP_007228708.1 CDS B479_09305 NC_019905.1 2070937 2071293 R COG4679 Phage-related protein; hypothetical protein complement(2070937..2071293) Pseudomonas putida HB3267 14288256 YP_007228709.1 CDS B479_09310 NC_019905.1 2071500 2071799 D hypothetical protein 2071500..2071799 Pseudomonas putida HB3267 14288257 YP_007228710.1 CDS tig NC_019905.1 2072047 2073360 D COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); trigger factor 2072047..2073360 Pseudomonas putida HB3267 14288258 YP_007228711.1 CDS clpP NC_019905.1 2073452 2074093 D COG0740 Protease subunit of ATP-dependent Clp proteases; ATP-dependent Clp protease proteolytic subunit 2073452..2074093 Pseudomonas putida HB3267 14288259 YP_007228712.1 CDS clpX NC_019905.1 2074202 2075485 D COG1219 ATP-dependent protease Clp, ATPase subunit; ATP-dependent protease ATP-binding subunit ClpX 2074202..2075485 Pseudomonas putida HB3267 14288260 YP_007228713.1 CDS B479_09330 NC_019905.1 2075649 2078045 D COG0466 ATP-dependent Lon protease, bacterial type; ATP-dependent protease La 2075649..2078045 Pseudomonas putida HB3267 14288261 YP_007228714.1 CDS B479_09335 NC_019905.1 2078198 2078470 D COG0776 Bacterial nucleoid DNA-binding protein; histone family protein DNA-binding protein 2078198..2078470 Pseudomonas putida HB3267 14288262 YP_007228715.1 CDS B479_09340 NC_019905.1 2078654 2080525 D COG0760 Parvulin-like peptidyl-prolyl isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 2078654..2080525 Pseudomonas putida HB3267 14288263 YP_007228716.1 CDS B479_09345 NC_019905.1 2080763 2081803 R COG1752 Predicted esterase of the alpha-beta hydrolase superfamily; patatin complement(2080763..2081803) Pseudomonas putida HB3267 14288264 YP_007228717.1 CDS B479_09350 NC_019905.1 2081982 2082260 D lipoprotein 2081982..2082260 Pseudomonas putida HB3267 14288265 YP_007228718.1 CDS B479_09355 NC_019905.1 2082278 2083057 D CHAD domain-containing protein 2082278..2083057 Pseudomonas putida HB3267 14288266 YP_007228719.1 CDS B479_09360 NC_019905.1 2083135 2083932 D COG1946 Acyl-CoA thioesterase; putative acyl-CoA thioesterase II 2083135..2083932 Pseudomonas putida HB3267 14288267 YP_007228720.1 CDS B479_09365 NC_019905.1 2084101 2084469 R hypothetical protein complement(2084101..2084469) Pseudomonas putida HB3267 14288268 YP_007228721.1 CDS B479_09370 NC_019905.1 2084545 2086023 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(2084545..2086023) Pseudomonas putida HB3267 14288269 YP_007228722.1 CDS B479_09375 NC_019905.1 2086280 2087077 R COG0084 Mg-dependent DNase; TatD-related deoxyribonuclease complement(2086280..2087077) Pseudomonas putida HB3267 14288270 YP_007228723.1 CDS B479_09380 NC_019905.1 2087236 2088642 D COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; lytic transglycosylase 2087236..2088642 Pseudomonas putida HB3267 14288271 YP_007228724.1 CDS B479_09385 NC_019905.1 2088756 2089193 D COG2259 Predicted membrane protein; DoxX family protein 2088756..2089193 Pseudomonas putida HB3267 14288272 YP_007228725.1 CDS B479_09390 NC_019905.1 2089417 2089725 D hypothetical protein 2089417..2089725 Pseudomonas putida HB3267 14288273 YP_007228726.1 CDS greB NC_019905.1 2089737 2090210 D COG0782 Transcription elongation factor; transcription elongation factor GreB 2089737..2090210 Pseudomonas putida HB3267 14288274 YP_007228727.1 CDS B479_09400 NC_019905.1 2090337 2092844 R COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component; hypothetical protein complement(2090337..2092844) Pseudomonas putida HB3267 14288275 YP_007228728.1 CDS B479_09405 NC_019905.1 2092844 2093527 R COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component; ABC transporter ATP-binding protein complement(2092844..2093527) Pseudomonas putida HB3267 14288276 YP_007228729.1 CDS B479_09410 NC_019905.1 2093538 2094143 D COG2755 Lysophospholipase L1 and related esterases; arylesterase 2093538..2094143 Pseudomonas putida HB3267 14288277 YP_007228730.1 CDS B479_09415 NC_019905.1 2094202 2094492 D COG1158 Transcription termination factor; hypothetical protein 2094202..2094492 Pseudomonas putida HB3267 14288278 YP_007228731.1 CDS B479_09420 NC_019905.1 2094604 2095581 D COG1376 Uncharacterized protein conserved in bacteria; ErfK/YbiS/YcfS/YnhG family protein 2094604..2095581 Pseudomonas putida HB3267 14288279 YP_007228732.1 CDS B479_09425 NC_019905.1 2095714 2095965 R outer membrane lipoprotein OprI complement(2095714..2095965) Pseudomonas putida HB3267 14288280 YP_007228733.1 CDS B479_09430 NC_019905.1 2096476 2096757 D COG2388 Predicted acetyltransferase; hypothetical protein 2096476..2096757 Pseudomonas putida HB3267 14288281 YP_007228734.1 CDS B479_09435 NC_019905.1 2096794 2097870 R COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase complement(2096794..2097870) Pseudomonas putida HB3267 14288282 YP_007228735.1 CDS B479_09440 NC_019905.1 2098102 2099049 D COG1893 Ketopantoate reductase; 2-dehydropantoate 2-reductase 2098102..2099049 Pseudomonas putida HB3267 14288283 YP_007228736.1 CDS B479_09445 NC_019905.1 2099174 2099671 D COG0589 Universal stress protein UspA and related nucleotide-binding proteins; UspA domain-containing protein 2099174..2099671 Pseudomonas putida HB3267 14288284 YP_007228737.1 CDS cysB NC_019905.1 2099801 2100775 D COG0583 Transcriptional regulator; transcriptional regulator CysB 2099801..2100775 Pseudomonas putida HB3267 14288285 YP_007228738.1 CDS B479_09455 NC_019905.1 2100898 2101632 R COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes; phosphoadenosine phosphosulfate reductase complement(2100898..2101632) Pseudomonas putida HB3267 14288286 YP_007228739.1 CDS B479_09460 NC_019905.1 2101799 2103142 R COG0147 Anthranilate/para-aminobenzoate synthases component I; para-aminobenzoate synthase subunit I complement(2101799..2103142) Pseudomonas putida HB3267 14288287 YP_007228740.1 CDS B479_09465 NC_019905.1 2103357 2104337 R COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); alpha-L-glutamate ligase-like protein complement(2103357..2104337) Pseudomonas putida HB3267 14288288 YP_007228741.1 CDS B479_09470 NC_019905.1 2104337 2105872 R hypothetical protein complement(2104337..2105872) Pseudomonas putida HB3267 14288289 YP_007228742.1 CDS B479_09475 NC_019905.1 2105878 2106393 R COG4067 Uncharacterized protein conserved in archaea; hypothetical protein complement(2105878..2106393) Pseudomonas putida HB3267 14288290 YP_007228743.1 CDS B479_09480 NC_019905.1 2106744 2107460 D COG1802 Transcriptional regulators; GntR family transcriptional regulator 2106744..2107460 Pseudomonas putida HB3267 14288291 YP_007228744.1 CDS prpB NC_019905.1 2107457 2108347 D COG2513 PEP phosphonomutase and related enzymes; 2-methylisocitrate lyase 2107457..2108347 Pseudomonas putida HB3267 14288292 YP_007228745.1 CDS B479_09490 NC_019905.1 2108515 2109642 D COG0372 Citrate synthase; methylcitrate synthase 2108515..2109642 Pseudomonas putida HB3267 14288293 YP_007228746.1 CDS B479_09495 NC_019905.1 2109834 2112422 D COG1048 Aconitase A; aconitate hydratase 2109834..2112422 Pseudomonas putida HB3267 14288294 YP_007228747.1 CDS B479_09500 NC_019905.1 2112580 2113770 D COG2828 Uncharacterized protein conserved in bacteria; putative AcnD-accessory protein PrpF 2112580..2113770 Pseudomonas putida HB3267 14288295 YP_007228748.1 CDS prpD NC_019905.1 2113925 2115409 D COG2079 Uncharacterized protein involved in propionate catabolism; 2-methylcitrate dehydratase 2113925..2115409 Pseudomonas putida HB3267 14288296 YP_007228749.1 CDS B479_09510 NC_019905.1 2115618 2118227 R COG1049 Aconitase B; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(2115618..2118227) Pseudomonas putida HB3267 14288297 YP_007228750.1 CDS B479_09515 NC_019905.1 2118634 2119113 D COG3313 Predicted Fe-S protein; hypothetical protein 2118634..2119113 Pseudomonas putida HB3267 14288298 YP_007228751.1 CDS B479_09520 NC_019905.1 2119183 2119539 R COG0720 6-pyruvoyl-tetrahydropterin synthase; queuosine biosynthesis protein QueD complement(2119183..2119539) Pseudomonas putida HB3267 14288299 YP_007228752.1 CDS B479_09525 NC_019905.1 2119593 2120672 R hypothetical protein complement(2119593..2120672) Pseudomonas putida HB3267 14288300 YP_007228753.1 CDS B479_09530 NC_019905.1 2120870 2121181 D COG3212 Predicted membrane protein; peptidase 2120870..2121181 Pseudomonas putida HB3267 14288301 YP_007228754.1 CDS B479_09535 NC_019905.1 2121181 2121495 D COG3212 Predicted membrane protein; peptidase 2121181..2121495 Pseudomonas putida HB3267 14288302 YP_007228755.1 CDS B479_09540 NC_019905.1 2121496 2122164 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component winged helix family transcriptional regulator 2121496..2122164 Pseudomonas putida HB3267 14288303 YP_007228756.1 CDS B479_09545 NC_019905.1 2122161 2123480 D COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2122161..2123480 Pseudomonas putida HB3267 14288304 YP_007228757.1 CDS B479_09550 NC_019905.1 2124049 2125203 D COG3448 CBS-domain-containing membrane protein; hypothetical protein 2124049..2125203 Pseudomonas putida HB3267 14288305 YP_007228758.1 CDS B479_09555 NC_019905.1 2125177 2126043 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2125177..2126043) Pseudomonas putida HB3267 14288306 YP_007228759.1 CDS B479_09560 NC_019905.1 2126224 2128113 D COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; AMP-dependent synthetase and ligase 2126224..2128113 Pseudomonas putida HB3267 14288307 YP_007228760.1 CDS B479_09565 NC_019905.1 2128241 2129311 R COG1485 Predicted ATPase; AFG1 family ATPase complement(2128241..2129311) Pseudomonas putida HB3267 14288308 YP_007228761.1 CDS B479_09570 NC_019905.1 2129470 2129895 D COG5579 Uncharacterized conserved protein; hypothetical protein 2129470..2129895 Pseudomonas putida HB3267 14288309 YP_007228762.1 CDS B479_09575 NC_019905.1 2129897 2130139 R hypothetical protein complement(2129897..2130139) Pseudomonas putida HB3267 14288310 YP_007228763.1 CDS B479_09580 NC_019905.1 2130568 2132955 R COG0784 FOG: CheY-like receiver; multi-sensor hybrid histidine kinase complement(2130568..2132955) Pseudomonas putida HB3267 14291748 YP_007228764.1 CDS B479_09585 NC_019905.1 2132969 2133430 R COG0784 FOG: CheY-like receiver; response regulator receiver protein complement(2132969..2133430) Pseudomonas putida HB3267 14288312 YP_007228765.1 CDS B479_09590 NC_019905.1 2133446 2135695 R COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); GAF sensor signal transduction histidine kinase complement(2133446..2135695) Pseudomonas putida HB3267 14288313 YP_007228766.1 CDS B479_09595 NC_019905.1 2135957 2136484 D COG5430 Uncharacterized secreted protein; spore coat U domain-containing protein 2135957..2136484 Pseudomonas putida HB3267 14288314 YP_007228767.1 CDS B479_09600 NC_019905.1 2136515 2137051 D COG5430 Uncharacterized secreted protein; spore coat U domain-containing protein 2136515..2137051 Pseudomonas putida HB3267 14288315 YP_007228768.1 CDS B479_09605 NC_019905.1 2137070 2137600 D COG5430 Uncharacterized secreted protein; spore coat U domain-containing protein 2137070..2137600 Pseudomonas putida HB3267 14288316 YP_007228769.1 CDS B479_09610 NC_019905.1 2137604 2138107 D COG5430 Uncharacterized secreted protein; spore coat U domain-containing protein 2137604..2138107 Pseudomonas putida HB3267 14288317 YP_007228770.1 CDS B479_09615 NC_019905.1 2138147 2138923 D COG3121 P pilus assembly protein, chaperone PapD; type 1 pili usher pathway chaperone CsuC 2138147..2138923 Pseudomonas putida HB3267 14288318 YP_007228771.1 CDS B479_09620 NC_019905.1 2138987 2141320 D COG3188 P pilus assembly protein, porin PapC; fimbrial biogenesis outer membrane usher protein 2138987..2141320 Pseudomonas putida HB3267 14288319 YP_007228772.1 CDS B479_09625 NC_019905.1 2141317 2142285 D COG5430 Uncharacterized secreted protein; spore coat U domain-containing protein 2141317..2142285 Pseudomonas putida HB3267 14288320 YP_007228773.1 CDS B479_09630 NC_019905.1 2142437 2143585 R COG2866 Predicted carboxypeptidase; peptidase M14, carboxypeptidase A complement(2142437..2143585) Pseudomonas putida HB3267 14288321 YP_007228774.1 CDS B479_09635 NC_019905.1 2143695 2144468 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(2143695..2144468) Pseudomonas putida HB3267 14288322 YP_007228775.1 CDS B479_09640 NC_019905.1 2144505 2145737 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(2144505..2145737) Pseudomonas putida HB3267 14288323 YP_007228776.1 CDS B479_09645 NC_019905.1 2145811 2146116 R hypothetical protein complement(2145811..2146116) Pseudomonas putida HB3267 14288324 YP_007228777.1 CDS B479_09650 NC_019905.1 2146106 2146888 R COG2853 Surface lipoprotein; VacJ family lipoprotein complement(2146106..2146888) Pseudomonas putida HB3267 14288325 YP_007228778.1 CDS B479_09655 NC_019905.1 2147057 2147767 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component transcriptional regulator 2147057..2147767 Pseudomonas putida HB3267 14288326 YP_007228779.1 CDS B479_09660 NC_019905.1 2147764 2149119 D COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2147764..2149119 Pseudomonas putida HB3267 14288327 YP_007228780.1 CDS B479_09665 NC_019905.1 2149120 2149584 R COG3558 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2149120..2149584) Pseudomonas putida HB3267 14288328 YP_007228781.1 CDS dkgB NC_019905.1 2150458 2151261 R COG0656 Aldo/keto reductases, related to diketogulonate reductase; 2,5-diketo-D-gluconate reductase B complement(2150458..2151261) Pseudomonas putida HB3267 14288329 YP_007228782.1 CDS B479_09685 NC_019905.1 2151618 2152112 R COG3749 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2151618..2152112) Pseudomonas putida HB3267 14288330 YP_007228783.1 CDS B479_09690 NC_019905.1 2152096 2153748 R COG0155 Sulfite reductase, beta subunit (hemoprotein); sulfite reductase (ferredoxin) complement(2152096..2153748) Pseudomonas putida HB3267 14288331 YP_007228784.1 CDS B479_09695 NC_019905.1 2153962 2155038 D COG1879 ABC-type sugar transport system, periplasmic component; periplasmic binding protein/LacI transcriptional regulator 2153962..2155038 Pseudomonas putida HB3267 14288332 YP_007228785.1 CDS B479_09700 NC_019905.1 2155124 2155237 D hypothetical protein 2155124..2155237 Pseudomonas putida HB3267 14288333 YP_007228786.1 CDS B479_09705 NC_019905.1 2155302 2155517 R hypothetical protein complement(2155302..2155517) Pseudomonas putida HB3267 14288334 YP_007228787.1 CDS metH NC_019905.1 2155678 2159385 R COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain; B12-dependent methionine synthase complement(2155678..2159385) Pseudomonas putida HB3267 14288335 YP_007228788.1 CDS B479_09715 NC_019905.1 2159569 2161869 D fatty acid cistrans isomerase 2159569..2161869 Pseudomonas putida HB3267 14288336 YP_007228789.1 CDS B479_09720 NC_019905.1 2162078 2163112 D COG1835 Predicted acyltransferases; acyltransferase 3 2162078..2163112 Pseudomonas putida HB3267 14288337 YP_007228790.1 CDS B479_09725 NC_019905.1 2163171 2163755 D COG0316 Uncharacterized conserved protein; protein YhgI 2163171..2163755 Pseudomonas putida HB3267 14288338 YP_007228791.1 CDS B479_09730 NC_019905.1 2164016 2164585 D COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems; electron transport protein SCO1/SenC 2164016..2164585 Pseudomonas putida HB3267 14288339 YP_007228792.1 CDS B479_09735 NC_019905.1 2164586 2165068 D COG2847 Uncharacterized protein conserved in bacteria; hypothetical protein 2164586..2165068 Pseudomonas putida HB3267 14288340 YP_007228793.1 CDS B479_09740 NC_019905.1 2165113 2165340 R hypothetical protein complement(2165113..2165340) Pseudomonas putida HB3267 14288341 YP_007228794.1 CDS B479_09745 NC_019905.1 2165413 2166246 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(2165413..2166246) Pseudomonas putida HB3267 14288342 YP_007228795.1 CDS B479_09750 NC_019905.1 2166243 2166557 R COG4392 Predicted membrane protein; branched chain amino acid ABC transporter complement(2166243..2166557) Pseudomonas putida HB3267 14288343 YP_007228796.1 CDS B479_09755 NC_019905.1 2166554 2167282 R COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); AzlC family protein complement(2166554..2167282) Pseudomonas putida HB3267 14288344 YP_007228797.1 CDS B479_09760 NC_019905.1 2167471 2168166 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(2167471..2168166) Pseudomonas putida HB3267 14288345 YP_007228798.1 CDS B479_09765 NC_019905.1 2168305 2169387 R hypothetical protein complement(2168305..2169387) Pseudomonas putida HB3267 14288346 YP_007228799.1 CDS B479_09770 NC_019905.1 2169427 2170053 R COG1280 Putative threonine efflux protein; lysine exporter protein LysE/YggA complement(2169427..2170053) Pseudomonas putida HB3267 14288347 YP_007228800.1 CDS B479_09775 NC_019905.1 2170056 2170844 R COG3403 Uncharacterized conserved protein; hypothetical protein complement(2170056..2170844) Pseudomonas putida HB3267 14288348 YP_007228801.1 CDS B479_09780 NC_019905.1 2171004 2171924 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 2171004..2171924 Pseudomonas putida HB3267 14288349 YP_007228802.1 CDS B479_09785 NC_019905.1 2172079 2174439 D COG0417 DNA polymerase elongation subunit (family B); DNA polymerase II 2172079..2174439 Pseudomonas putida HB3267 14288350 YP_007228803.1 CDS B479_09790 NC_019905.1 2174521 2179008 D COG4886 Leucine-rich repeat (LRR) protein; hypothetical protein 2174521..2179008 Pseudomonas putida HB3267 14288351 YP_007228804.1 CDS B479_09795 NC_019905.1 2179208 2179762 D hypothetical protein 2179208..2179762 Pseudomonas putida HB3267 14288352 YP_007228805.1 CDS B479_09800 NC_019905.1 2179926 2180417 D hypothetical protein 2179926..2180417 Pseudomonas putida HB3267 14288353 YP_007228806.1 CDS B479_09805 NC_019905.1 2180494 2181342 D COG3220 Uncharacterized protein conserved in bacteria; hypothetical protein 2180494..2181342 Pseudomonas putida HB3267 14288354 YP_007228807.1 CDS B479_09810 NC_019905.1 2181335 2182033 D COG3219 Uncharacterized protein conserved in bacteria; hypothetical protein 2181335..2182033 Pseudomonas putida HB3267 14288355 YP_007228808.1 CDS B479_09815 NC_019905.1 2182184 2182672 R COG2259 Predicted membrane protein; hypothetical protein complement(2182184..2182672) Pseudomonas putida HB3267 14288356 YP_007228809.1 CDS B479_09820 NC_019905.1 2182687 2183304 R ferric reductase domain-containing protein complement(2182687..2183304) Pseudomonas putida HB3267 14288357 YP_007228810.1 CDS B479_09825 NC_019905.1 2183553 2184839 R COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(2183553..2184839) Pseudomonas putida HB3267 14288358 YP_007228811.1 CDS B479_09830 NC_019905.1 2184836 2185576 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component winged helix family transcriptional regulator complement(2184836..2185576) Pseudomonas putida HB3267 14288359 YP_007228812.1 CDS B479_09835 NC_019905.1 2185797 2186072 D hypothetical protein 2185797..2186072 Pseudomonas putida HB3267 14288360 YP_007228813.1 CDS B479_09840 NC_019905.1 2186080 2186598 D COG0526 Thiol-disulfide isomerase and thioredoxins; redoxin domain-containing protein 2186080..2186598 Pseudomonas putida HB3267 14288361 YP_007228814.1 CDS B479_09845 NC_019905.1 2186655 2187503 R COG0169 Shikimate 5-dehydrogenase; shikimate 5-dehydrogenase complement(2186655..2187503) Pseudomonas putida HB3267 14288362 YP_007228815.1 CDS B479_09850 NC_019905.1 2187500 2187949 R COG0757 3-dehydroquinate dehydratase II; 3-dehydroquinate dehydratase complement(2187500..2187949) Pseudomonas putida HB3267 14288363 YP_007228816.1 CDS B479_09855 NC_019905.1 2188165 2189418 D COG1538 Outer membrane protein; outer membrane efflux protein 2188165..2189418 Pseudomonas putida HB3267 14288364 YP_007228817.1 CDS B479_09860 NC_019905.1 2189411 2190610 D COG0845 Membrane-fusion protein; RND family efflux transporter, MFP subunit 2189411..2190610 Pseudomonas putida HB3267 14288365 YP_007228818.1 CDS B479_09865 NC_019905.1 2190627 2193773 D COG3696 Putative silver efflux pump; CzcA family heavy metal efflux protein 2190627..2193773 Pseudomonas putida HB3267 14288366 YP_007228819.1 CDS B479_09870 NC_019905.1 2193908 2195245 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(2193908..2195245) Pseudomonas putida HB3267 14288367 YP_007228820.1 CDS B479_09875 NC_019905.1 2195575 2197725 R COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent siderophore receptor complement(2195575..2197725) Pseudomonas putida HB3267 14288368 YP_007228821.1 CDS B479_09880 NC_019905.1 2197796 2198206 R hypothetical protein complement(2197796..2198206) Pseudomonas putida HB3267 14288369 YP_007228822.1 CDS B479_09885 NC_019905.1 2198291 2199067 R COG1192 ATPases involved in chromosome partitioning; cobyrinic acid a,c-diamide synthase complement(2198291..2199067) Pseudomonas putida HB3267 14288370 YP_007228823.1 CDS B479_09890 NC_019905.1 2199234 2200805 R COG2199 FOG: GGDEF domain; diguanylate cyclase complement(2199234..2200805) Pseudomonas putida HB3267 14288371 YP_007228824.1 CDS B479_09895 NC_019905.1 2200884 2201363 R hypothetical protein complement(2200884..2201363) Pseudomonas putida HB3267 14288372 YP_007228825.1 CDS B479_09900 NC_019905.1 2201572 2202912 R outer membrane porin complement(2201572..2202912) Pseudomonas putida HB3267 14288373 YP_007228826.1 CDS B479_09905 NC_019905.1 2202929 2203717 R COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; iron ABC transporter ATP-binding protein complement(2202929..2203717) Pseudomonas putida HB3267 14288374 YP_007228827.1 CDS B479_09910 NC_019905.1 2203714 2204730 R COG0609 ABC-type Fe3+-siderophore transport system, permease component; transport system permease complement(2203714..2204730) Pseudomonas putida HB3267 14288375 YP_007228828.1 CDS B479_09915 NC_019905.1 2204730 2205740 R COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; periplasmic binding protein complement(2204730..2205740) Pseudomonas putida HB3267 14288376 YP_007228829.1 CDS B479_09920 NC_019905.1 2206078 2207244 R COG3503 Predicted membrane protein; hypothetical protein complement(2206078..2207244) Pseudomonas putida HB3267 14288377 YP_007228830.1 CDS B479_09925 NC_019905.1 2207535 2209661 R COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent siderophore receptor complement(2207535..2209661) Pseudomonas putida HB3267 14288378 YP_007228831.1 CDS B479_09930 NC_019905.1 2210013 2210906 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2210013..2210906) Pseudomonas putida HB3267 14288379 YP_007228832.1 CDS B479_09935 NC_019905.1 2211041 2211280 D putative lipoprotein 2211041..2211280 Pseudomonas putida HB3267 14288380 YP_007228833.1 CDS B479_09940 NC_019905.1 2211310 2212062 D COG0861 Membrane protein TerC, possibly involved in tellurium resistance; integral membrane protein TerC 2211310..2212062 Pseudomonas putida HB3267 14288381 YP_007228834.1 CDS B479_09945 NC_019905.1 2212196 2212372 R hypothetical protein complement(2212196..2212372) Pseudomonas putida HB3267 14288382 YP_007228835.1 CDS B479_09950 NC_019905.1 2212595 2213272 D hypothetical protein 2212595..2213272 Pseudomonas putida HB3267 14288383 YP_007228836.1 CDS B479_09955 NC_019905.1 2213384 2214667 R COG0665 Glycine/D-amino acid oxidases (deaminating); gamma-glutamylputrescine oxidoreductase complement(2213384..2214667) Pseudomonas putida HB3267 14288384 YP_007228837.1 CDS B479_09960 NC_019905.1 2215322 2215891 D sporulation domain-containing protein 2215322..2215891 Pseudomonas putida HB3267 14291750 YP_007228838.1 CDS B479_09965 NC_019905.1 2216131 2216556 D COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; hypothetical protein 2216131..2216556 Pseudomonas putida HB3267 14288386 YP_007228839.1 CDS B479_09970 NC_019905.1 2216569 2216811 R COG0443 Molecular chaperone; hypothetical protein complement(2216569..2216811) Pseudomonas putida HB3267 14288387 YP_007228840.1 CDS B479_09975 NC_019905.1 2216943 2218031 R COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; glutaminase-asparaginase complement(2216943..2218031) Pseudomonas putida HB3267 14288388 YP_007228841.1 CDS B479_09980 NC_019905.1 2218436 2219392 D COG1879 ABC-type sugar transport system, periplasmic component; monosaccharide-transporting ATPase 2218436..2219392 Pseudomonas putida HB3267 14288389 YP_007228842.1 CDS B479_09985 NC_019905.1 2219414 2220967 D COG1129 ABC-type sugar transport system, ATPase component; ribose ABC transporter ATP-binding protein 2219414..2220967 Pseudomonas putida HB3267 14288390 YP_007228843.1 CDS B479_09990 NC_019905.1 2220964 2221959 D COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; monosaccharide-transporting ATPase 2220964..2221959 Pseudomonas putida HB3267 14288391 YP_007228844.1 CDS B479_09995 NC_019905.1 2221964 2222986 D COG1609 Transcriptional regulators; alanine racemase 2221964..2222986 Pseudomonas putida HB3267 14288392 YP_007228845.1 CDS B479_10000 NC_019905.1 2223002 2223910 D COG0524 Sugar kinases, ribokinase family; ribokinase 2223002..2223910 Pseudomonas putida HB3267 14288393 YP_007228846.1 CDS B479_10005 NC_019905.1 2223907 2224305 D COG1869 ABC-type ribose transport system, auxiliary component; D-ribose pyranase 2223907..2224305 Pseudomonas putida HB3267 14288394 YP_007228847.1 CDS B479_10010 NC_019905.1 2224495 2225463 D COG1957 Inosine-uridine nucleoside N-ribohydrolase; inosine/uridine-preferring nucleoside hydrolase 2224495..2225463 Pseudomonas putida HB3267 14288395 YP_007228848.1 CDS B479_10015 NC_019905.1 2225435 2225647 R hypothetical protein complement(2225435..2225647) Pseudomonas putida HB3267 14288396 YP_007228849.1 CDS B479_10020 NC_019905.1 2225924 2226244 D hypothetical protein 2225924..2226244 Pseudomonas putida HB3267 14288397 YP_007228850.1 CDS B479_10025 NC_019905.1 2226452 2226664 R COG1278 Cold shock proteins; cold shock protein CspA complement(2226452..2226664) Pseudomonas putida HB3267 14288398 YP_007228851.1 CDS B479_10030 NC_019905.1 2226827 2227132 R hypothetical protein complement(2226827..2227132) Pseudomonas putida HB3267 14288399 YP_007228852.1 CDS thrS NC_019905.1 2227471 2229393 D COG0441 Threonyl-tRNA synthetase; threonyl-tRNA ligase 2227471..2229393 Pseudomonas putida HB3267 14288400 YP_007228853.1 CDS infC NC_019905.1 2229411 2229944 D COG0290 Translation initiation factor 3 (IF-3); translation initiation factor IF-3 2229411..2229944 Pseudomonas putida HB3267 14288401 YP_007228854.1 CDS rpmI NC_019905.1 2230006 2230200 D COG0291 Ribosomal protein L35; 50S ribosomal protein L35 2230006..2230200 Pseudomonas putida HB3267 14288402 YP_007228855.1 CDS rplT NC_019905.1 2230228 2230584 D COG0292 Ribosomal protein L20; 50S ribosomal protein L20 2230228..2230584 Pseudomonas putida HB3267 14288403 YP_007228856.1 CDS pheS NC_019905.1 2230694 2231710 D COG0016 Phenylalanyl-tRNA synthetase alpha subunit; phenylalanyl-tRNA ligase subunit alpha 2230694..2231710 Pseudomonas putida HB3267 14288404 YP_007228857.1 CDS pheT NC_019905.1 2231744 2234125 D COG0073 EMAP domain; phenylalanyl-tRNA ligase subunit beta 2231744..2234125 Pseudomonas putida HB3267 14288405 YP_007228858.1 CDS ihfA NC_019905.1 2234130 2234432 D COG0776 Bacterial nucleoid DNA-binding protein; integration host factor subunit alpha 2234130..2234432 Pseudomonas putida HB3267 14288406 YP_007228859.1 CDS B479_10070 NC_019905.1 2234413 2234769 D COG0789 Predicted transcriptional regulators; MerR family transcriptional regulator 2234413..2234769 Pseudomonas putida HB3267 14288407 YP_007228860.1 CDS B479_10075 NC_019905.1 2235042 2236223 R COG0582 Integrase; integrase family protein complement(2235042..2236223) Pseudomonas putida HB3267 14291751 YP_007228861.1 CDS B479_10080 NC_019905.1 2236528 2236704 R hypothetical protein complement(2236528..2236704) Pseudomonas putida HB3267 14288409 YP_007228862.1 CDS B479_10085 NC_019905.1 2236719 2237456 R COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases; phosphoprotein phosphatase complement(2236719..2237456) Pseudomonas putida HB3267 14288410 YP_007228863.1 CDS B479_10090 NC_019905.1 2237749 2238144 R hypothetical protein complement(2237749..2238144) Pseudomonas putida HB3267 14288411 YP_007228864.1 CDS B479_10095 NC_019905.1 2238141 2238341 R hypothetical protein complement(2238141..2238341) Pseudomonas putida HB3267 14288412 YP_007228865.1 CDS B479_10100 NC_019905.1 2238407 2238616 R hypothetical protein complement(2238407..2238616) Pseudomonas putida HB3267 14288413 YP_007228866.1 CDS B479_10105 NC_019905.1 2238613 2238885 R hypothetical protein complement(2238613..2238885) Pseudomonas putida HB3267 14288414 YP_007228867.1 CDS B479_10110 NC_019905.1 2238882 2239391 R hypothetical protein complement(2238882..2239391) Pseudomonas putida HB3267 14288415 YP_007228868.1 CDS B479_10115 NC_019905.1 2239566 2239769 D hypothetical protein 2239566..2239769 Pseudomonas putida HB3267 14288416 YP_007228869.1 CDS B479_10120 NC_019905.1 2239798 2240265 R hypothetical protein complement(2239798..2240265) Pseudomonas putida HB3267 14288417 YP_007228870.1 CDS B479_10125 NC_019905.1 2240337 2241998 R COG0270 Site-specific DNA methylase; DNA-cytosine methyltransferase complement(2240337..2241998) Pseudomonas putida HB3267 14288418 YP_007228871.1 CDS B479_10130 NC_019905.1 2242066 2242623 R COG0621 2-methylthioadenine synthetase; hypothetical protein complement(2242066..2242623) Pseudomonas putida HB3267 14288419 YP_007228872.1 CDS B479_10135 NC_019905.1 2242638 2243183 R hypothetical protein complement(2242638..2243183) Pseudomonas putida HB3267 14288420 YP_007228873.1 CDS B479_10140 NC_019905.1 2243246 2243809 R hypothetical protein complement(2243246..2243809) Pseudomonas putida HB3267 14288421 YP_007228874.1 CDS B479_10145 NC_019905.1 2243784 2244149 R hypothetical protein complement(2243784..2244149) Pseudomonas putida HB3267 14288422 YP_007228875.1 CDS B479_10150 NC_019905.1 2244231 2244773 R hypothetical protein complement(2244231..2244773) Pseudomonas putida HB3267 14288423 YP_007228876.1 CDS B479_10155 NC_019905.1 2244770 2245597 R hypothetical protein complement(2244770..2245597) Pseudomonas putida HB3267 14288424 YP_007228877.1 CDS B479_10160 NC_019905.1 2245594 2246406 R phage-related exonuclease complement(2245594..2246406) Pseudomonas putida HB3267 14288425 YP_007228878.1 CDS B479_10165 NC_019905.1 2246417 2246851 R hypothetical protein complement(2246417..2246851) Pseudomonas putida HB3267 14288426 YP_007228879.1 CDS B479_10170 NC_019905.1 2246908 2247342 R EndY protein complement(2246908..2247342) Pseudomonas putida HB3267 14288427 YP_007228880.1 CDS B479_10175 NC_019905.1 2247475 2247591 R hypothetical protein complement(2247475..2247591) Pseudomonas putida HB3267 14288428 YP_007228881.1 CDS B479_10180 NC_019905.1 2247588 2247788 R hypothetical protein complement(2247588..2247788) Pseudomonas putida HB3267 14288429 YP_007228882.1 CDS B479_10185 NC_019905.1 2247785 2247988 R hypothetical protein complement(2247785..2247988) Pseudomonas putida HB3267 14288430 YP_007228883.1 CDS B479_10190 NC_019905.1 2247985 2248401 R hypothetical protein complement(2247985..2248401) Pseudomonas putida HB3267 14288431 YP_007228884.1 CDS B479_10195 NC_019905.1 2248414 2248659 R hypothetical protein complement(2248414..2248659) Pseudomonas putida HB3267 14288432 YP_007228885.1 CDS B479_10200 NC_019905.1 2248680 2248922 R hypothetical protein complement(2248680..2248922) Pseudomonas putida HB3267 14288433 YP_007228886.1 CDS B479_10205 NC_019905.1 2248955 2249152 D hypothetical protein 2248955..2249152 Pseudomonas putida HB3267 14288434 YP_007228887.1 CDS B479_10210 NC_019905.1 2249694 2250092 R hypothetical protein complement(2249694..2250092) Pseudomonas putida HB3267 14288435 YP_007228888.1 CDS B479_10215 NC_019905.1 2250119 2250685 R hypothetical protein complement(2250119..2250685) Pseudomonas putida HB3267 14288436 YP_007228889.1 CDS B479_10220 NC_019905.1 2251206 2251532 D hypothetical protein 2251206..2251532 Pseudomonas putida HB3267 14288437 YP_007228890.1 CDS B479_10225 NC_019905.1 2251578 2251955 R hypothetical protein complement(2251578..2251955) Pseudomonas putida HB3267 14288438 YP_007228891.1 CDS B479_10230 NC_019905.1 2252072 2252878 R COG1396 Predicted transcriptional regulators; putative phage repressor complement(2252072..2252878) Pseudomonas putida HB3267 14288439 YP_007228892.1 CDS B479_10235 NC_019905.1 2252982 2253197 D COG1396 Predicted transcriptional regulators; Cro repressor 2252982..2253197 Pseudomonas putida HB3267 14288440 YP_007228893.1 CDS B479_10240 NC_019905.1 2253228 2253416 D hypothetical protein 2253228..2253416 Pseudomonas putida HB3267 14288441 YP_007228894.1 CDS B479_10245 NC_019905.1 2253677 2253883 D hypothetical protein 2253677..2253883 Pseudomonas putida HB3267 14288442 YP_007228895.1 CDS B479_10250 NC_019905.1 2253901 2254113 D hypothetical protein 2253901..2254113 Pseudomonas putida HB3267 14288443 YP_007228896.1 CDS B479_10255 NC_019905.1 2254255 2254449 R hypothetical protein complement(2254255..2254449) Pseudomonas putida HB3267 14288444 YP_007228897.1 CDS B479_10260 NC_019905.1 2254448 2255437 D phage replication protein O 2254448..2255437 Pseudomonas putida HB3267 14288445 YP_007228898.1 CDS B479_10265 NC_019905.1 2255434 2256774 D COG0305 Replicative DNA helicase; replicative DNA helicase 2255434..2256774 Pseudomonas putida HB3267 14288446 YP_007228899.1 CDS B479_10270 NC_019905.1 2256774 2257427 D hypothetical protein 2256774..2257427 Pseudomonas putida HB3267 14288447 YP_007228900.1 CDS B479_10275 NC_019905.1 2257495 2257737 D hypothetical protein 2257495..2257737 Pseudomonas putida HB3267 14288448 YP_007228901.1 CDS B479_10280 NC_019905.1 2257737 2258327 D hypothetical protein 2257737..2258327 Pseudomonas putida HB3267 14288449 YP_007228902.1 CDS B479_10285 NC_019905.1 2258483 2258950 D hypothetical protein 2258483..2258950 Pseudomonas putida HB3267 14288450 YP_007228903.1 CDS B479_10290 NC_019905.1 2258947 2259513 D prophage LambdaSa2, HNH endonuclease family protein 2258947..2259513 Pseudomonas putida HB3267 14288451 YP_007228904.1 CDS B479_10295 NC_019905.1 2259665 2260258 D COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); bacteriophage lambda NinG family protein 2259665..2260258 Pseudomonas putida HB3267 14288452 YP_007228905.1 CDS B479_10300 NC_019905.1 2260255 2260398 D hypothetical protein 2260255..2260398 Pseudomonas putida HB3267 14288453 YP_007228906.1 CDS B479_10305 NC_019905.1 2260398 2261078 D hypothetical protein 2260398..2261078 Pseudomonas putida HB3267 14288454 YP_007228907.1 CDS B479_10310 NC_019905.1 2261263 2261463 D hypothetical protein 2261263..2261463 Pseudomonas putida HB3267 14288455 YP_007228908.1 CDS B479_10315 NC_019905.1 2261452 2261751 R hypothetical protein complement(2261452..2261751) Pseudomonas putida HB3267 14288456 YP_007228909.1 CDS B479_10320 NC_019905.1 2262036 2262224 D phage holin 2262036..2262224 Pseudomonas putida HB3267 14288457 YP_007228910.1 CDS B479_10325 NC_019905.1 2262282 2262512 D hypothetical protein 2262282..2262512 Pseudomonas putida HB3267 14288458 YP_007228911.1 CDS B479_10330 NC_019905.1 2262522 2262956 D COG0638 20S proteasome, alpha and beta subunits; 20S proteasome subunits A/B 2262522..2262956 Pseudomonas putida HB3267 14288459 YP_007228912.1 CDS B479_10335 NC_019905.1 2262966 2263484 D putative phage-like protein 2262966..2263484 Pseudomonas putida HB3267 14288460 YP_007228913.1 CDS B479_10340 NC_019905.1 2263487 2264974 D putative phage terminase large subunit 2263487..2264974 Pseudomonas putida HB3267 14288461 YP_007228914.1 CDS B479_10345 NC_019905.1 2264983 2266407 D hypothetical protein 2264983..2266407 Pseudomonas putida HB3267 14288462 YP_007228915.1 CDS B479_10350 NC_019905.1 2266397 2267443 D COG5585 NAD+--asparagine ADP-ribosyltransferase; SPP1 family phage head morphogenesis protein 2266397..2267443 Pseudomonas putida HB3267 14288463 YP_007228916.1 CDS B479_10355 NC_019905.1 2267561 2268271 D hypothetical protein 2267561..2268271 Pseudomonas putida HB3267 14288464 YP_007228917.1 CDS B479_10360 NC_019905.1 2268284 2269252 D hypothetical protein 2268284..2269252 Pseudomonas putida HB3267 14288465 YP_007228918.1 CDS B479_10365 NC_019905.1 2269301 2269903 D COG0009 Putative translation factor (SUA5); hypothetical protein 2269301..2269903 Pseudomonas putida HB3267 14288466 YP_007228919.1 CDS B479_10370 NC_019905.1 2269943 2270335 D hypothetical protein 2269943..2270335 Pseudomonas putida HB3267 14288467 YP_007228920.1 CDS B479_10375 NC_019905.1 2270338 2270718 D hypothetical protein 2270338..2270718 Pseudomonas putida HB3267 14288468 YP_007228921.1 CDS B479_10380 NC_019905.1 2270721 2271149 D hypothetical protein 2270721..2271149 Pseudomonas putida HB3267 14288469 YP_007228922.1 CDS B479_10385 NC_019905.1 2271146 2271550 D hypothetical protein 2271146..2271550 Pseudomonas putida HB3267 14288470 YP_007228923.1 CDS B479_10390 NC_019905.1 2271677 2272198 D COG0666 FOG: Ankyrin repeat; hypothetical protein 2271677..2272198 Pseudomonas putida HB3267 14288471 YP_007228924.1 CDS B479_10395 NC_019905.1 2272265 2273434 D COG5492 Bacterial surface proteins containing Ig-like domains; Ig domain-containing protein 2272265..2273434 Pseudomonas putida HB3267 14288472 YP_007228925.1 CDS B479_10400 NC_019905.1 2273492 2273932 D hypothetical protein 2273492..2273932 Pseudomonas putida HB3267 14288473 YP_007228926.1 CDS B479_10405 NC_019905.1 2274007 2274282 D hypothetical protein 2274007..2274282 Pseudomonas putida HB3267 14288474 YP_007228927.1 CDS B479_10410 NC_019905.1 2274310 2274759 R COG1396 Predicted transcriptional regulators; helix-turn-helix domain-containing protein complement(2274310..2274759) Pseudomonas putida HB3267 14288475 YP_007228928.1 CDS B479_10415 NC_019905.1 2275137 2275976 D COG3646 Uncharacterized phage-encoded protein; prophage antirepressor 2275137..2275976 Pseudomonas putida HB3267 14288476 YP_007228929.1 CDS B479_10420 NC_019905.1 2275973 2276548 D hypothetical protein 2275973..2276548 Pseudomonas putida HB3267 14288477 YP_007228930.1 CDS B479_10425 NC_019905.1 2276541 2276999 D hypothetical protein 2276541..2276999 Pseudomonas putida HB3267 14288478 YP_007228931.1 CDS B479_10430 NC_019905.1 2277355 2277651 D putative phage-related membrane protein 2277355..2277651 Pseudomonas putida HB3267 14288479 YP_007228932.1 CDS B479_10435 NC_019905.1 2277707 2280442 D COG5281 Phage-related minor tail protein; phage-related minor tail protein 2277707..2280442 Pseudomonas putida HB3267 14288480 YP_007228933.1 CDS B479_10440 NC_019905.1 2280640 2281092 D hypothetical protein 2280640..2281092 Pseudomonas putida HB3267 14288481 YP_007228934.1 CDS B479_10445 NC_019905.1 2281089 2281568 D hypothetical protein 2281089..2281568 Pseudomonas putida HB3267 14288482 YP_007228935.1 CDS B479_10450 NC_019905.1 2281571 2281975 D COG0791 Cell wall-associated hydrolases (invasion-associated proteins); hypothetical protein 2281571..2281975 Pseudomonas putida HB3267 14288483 YP_007228936.1 CDS B479_10455 NC_019905.1 2281944 2284994 D hypothetical protein 2281944..2284994 Pseudomonas putida HB3267 14288484 YP_007228937.1 CDS B479_10460 NC_019905.1 2285052 2287211 D hypothetical protein 2285052..2287211 Pseudomonas putida HB3267 14288485 YP_007228938.1 CDS B479_10465 NC_019905.1 2287261 2287455 D hypothetical protein 2287261..2287455 Pseudomonas putida HB3267 14288486 YP_007228939.1 CDS B479_10470 NC_019905.1 2288861 2289349 D COG4678 Muramidase (phage lambda lysozyme); lysozyme 2288861..2289349 Pseudomonas putida HB3267 14288487 YP_007228940.1 CDS B479_10475 NC_019905.1 2289346 2289861 D COG0542 ATPases with chaperone activity, ATP-binding subunit; hypothetical protein 2289346..2289861 Pseudomonas putida HB3267 14288488 YP_007228941.1 CDS B479_10480 NC_019905.1 2289928 2290236 D hypothetical protein 2289928..2290236 Pseudomonas putida HB3267 14288489 YP_007228942.1 CDS B479_10485 NC_019905.1 2290226 2290432 D hypothetical protein 2290226..2290432 Pseudomonas putida HB3267 14288490 YP_007228943.1 CDS B479_10490 NC_019905.1 2291430 2292632 R hypothetical protein complement(2291430..2292632) Pseudomonas putida HB3267 14288491 YP_007228944.1 CDS B479_10495 NC_019905.1 2292695 2293567 R COG2378 Predicted transcriptional regulator; transcriptional regulator-like protein complement(2292695..2293567) Pseudomonas putida HB3267 14288492 YP_007228945.1 CDS B479_10500 NC_019905.1 2293687 2293947 D hypothetical protein 2293687..2293947 Pseudomonas putida HB3267 14288493 YP_007228946.1 CDS B479_10505 NC_019905.1 2293956 2295008 D COG1397 ADP-ribosylglycohydrolase; ADP-ribosylation/Crystallin J1 2293956..2295008 Pseudomonas putida HB3267 14288494 YP_007228947.1 CDS B479_10510 NC_019905.1 2295253 2295693 R COG3293 Transposase and inactivated derivatives; IS4, transposase complement(2295253..2295693) Pseudomonas putida HB3267 14288495 YP_007228948.1 CDS B479_10515 NC_019905.1 2295729 2296109 R COG3293 Transposase and inactivated derivatives; ISPs1, transposase OrfA complement(2295729..2296109) Pseudomonas putida HB3267 14288496 YP_007228949.1 CDS B479_10520 NC_019905.1 2296604 2297341 D hypothetical protein 2296604..2297341 Pseudomonas putida HB3267 14288497 YP_007228950.1 CDS B479_10525 NC_019905.1 2297459 2298355 R hypothetical protein complement(2297459..2298355) Pseudomonas putida HB3267 14288498 YP_007228951.1 CDS B479_10530 NC_019905.1 2298355 2299095 R COG4735 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2298355..2299095) Pseudomonas putida HB3267 14288499 YP_007228952.1 CDS B479_10535 NC_019905.1 2299106 2299420 R COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein complement(2299106..2299420) Pseudomonas putida HB3267 14288500 YP_007228953.1 CDS B479_10540 NC_019905.1 2299428 2301062 R COG0486 Predicted GTPase; HSR1-like GTP-binding protein complement(2299428..2301062) Pseudomonas putida HB3267 14288501 YP_007228954.1 CDS B479_10545 NC_019905.1 2301059 2302822 R COG0699 Predicted GTPases (dynamin-related); dynamin family protein complement(2301059..2302822) Pseudomonas putida HB3267 14288502 YP_007228955.1 CDS B479_10550 NC_019905.1 2302830 2303423 R hypothetical protein complement(2302830..2303423) Pseudomonas putida HB3267 14288503 YP_007228956.1 CDS B479_10555 NC_019905.1 2303435 2304304 R COG1159 GTPase; GTPase complement(2303435..2304304) Pseudomonas putida HB3267 14288504 YP_007228957.1 CDS B479_10560 NC_019905.1 2304787 2305530 D hypothetical protein 2304787..2305530 Pseudomonas putida HB3267 14288505 YP_007228958.1 CDS B479_10565 NC_019905.1 2305620 2307047 D COG1479 Uncharacterized conserved protein; hypothetical protein 2305620..2307047 Pseudomonas putida HB3267 14288506 YP_007228959.1 CDS B479_10570 NC_019905.1 2307037 2309067 D COG1479 Uncharacterized conserved protein; hypothetical protein 2307037..2309067 Pseudomonas putida HB3267 14288507 YP_007228960.1 CDS B479_10575 NC_019905.1 2309435 2311627 D hypothetical protein 2309435..2311627 Pseudomonas putida HB3267 14288508 YP_007228961.1 CDS B479_10580 NC_019905.1 2311641 2312384 D COG1360 Flagellar motor protein; hypothetical protein 2311641..2312384 Pseudomonas putida HB3267 14288509 YP_007228962.1 CDS B479_10585 NC_019905.1 2312381 2314009 D hypothetical protein 2312381..2314009 Pseudomonas putida HB3267 14288510 YP_007228963.1 CDS B479_10590 NC_019905.1 2314009 2317296 D COG0553 Superfamily II DNA/RNA helicases, SNF2 family; non-specific serine/threonine protein kinase 2314009..2317296 Pseudomonas putida HB3267 14288511 YP_007228964.1 CDS B479_10595 NC_019905.1 2317844 2319652 R COG0542 ATPases with chaperone activity, ATP-binding subunit; hypothetical protein complement(2317844..2319652) Pseudomonas putida HB3267 14288512 YP_007228965.1 CDS B479_10600 NC_019905.1 2319652 2320446 R hypothetical protein complement(2319652..2320446) Pseudomonas putida HB3267 14288513 YP_007228966.1 CDS B479_10605 NC_019905.1 2320649 2323498 R endonuclease complement(2320649..2323498) Pseudomonas putida HB3267 14288514 YP_007228967.1 CDS B479_10610 NC_019905.1 2323498 2323887 R hypothetical protein complement(2323498..2323887) Pseudomonas putida HB3267 14288515 YP_007228968.1 CDS B479_10615 NC_019905.1 2324996 2326648 R COG0270 Site-specific DNA methylase; DNA-cytosine methyltransferase complement(2324996..2326648) Pseudomonas putida HB3267 14288516 YP_007228969.1 CDS B479_10620 NC_019905.1 2326678 2327109 D COG3727 DNA G:T-mismatch repair endonuclease; DNA mismatch endonuclease Vsr 2326678..2327109 Pseudomonas putida HB3267 14288517 YP_007228970.1 CDS B479_10625 NC_019905.1 2327112 2328185 R hypothetical protein complement(2327112..2328185) Pseudomonas putida HB3267 14288518 YP_007228971.1 CDS B479_10630 NC_019905.1 2328504 2329271 D hypothetical protein 2328504..2329271 Pseudomonas putida HB3267 14288519 YP_007228972.1 CDS B479_10635 NC_019905.1 2329386 2329649 R hypothetical protein complement(2329386..2329649) Pseudomonas putida HB3267 14288520 YP_007228973.1 CDS B479_10640 NC_019905.1 2329815 2330057 R hypothetical protein complement(2329815..2330057) Pseudomonas putida HB3267 14288521 YP_007228974.1 CDS B479_10645 NC_019905.1 2330599 2331267 D COG1418 Predicted HD superfamily hydrolase; Metal dependent phosphohydrolase 2330599..2331267 Pseudomonas putida HB3267 14288522 YP_007228975.1 CDS B479_10650 NC_019905.1 2331815 2332852 R COG2203 FOG: GAF domain; diguanylate cyclase complement(2331815..2332852) Pseudomonas putida HB3267 14288523 YP_007228976.1 CDS B479_10655 NC_019905.1 2333053 2333961 D COG2066 Glutaminase; glutaminase 2333053..2333961 Pseudomonas putida HB3267 14288524 YP_007228977.1 CDS B479_10660 NC_019905.1 2334001 2334723 R COG2186 Transcriptional regulators; GntR family transcriptional regulator complement(2334001..2334723) Pseudomonas putida HB3267 14288525 YP_007228978.1 CDS B479_10665 NC_019905.1 2335231 2336964 R COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; dihydroxy-acid dehydratase complement(2335231..2336964) Pseudomonas putida HB3267 14288526 YP_007228979.1 CDS B479_10670 NC_019905.1 2337149 2338456 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 2337149..2338456 Pseudomonas putida HB3267 14288527 YP_007228980.1 CDS B479_10675 NC_019905.1 2338485 2339474 D COG3802 Uncharacterized protein conserved in bacteria; hypothetical protein 2338485..2339474 Pseudomonas putida HB3267 14288528 YP_007228981.1 CDS B479_10680 NC_019905.1 2339685 2341259 D COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase 2339685..2341259 Pseudomonas putida HB3267 14288529 YP_007228982.1 CDS B479_10685 NC_019905.1 2341318 2342082 R COG5486 Predicted metal-binding integral membrane protein; hypothetical protein complement(2341318..2342082) Pseudomonas putida HB3267 14288530 YP_007228983.1 CDS B479_10690 NC_019905.1 2342063 2342698 R COG5588 Uncharacterized conserved protein; hypothetical protein complement(2342063..2342698) Pseudomonas putida HB3267 14288531 YP_007228984.1 CDS B479_10695 NC_019905.1 2342821 2343303 R hypothetical protein complement(2342821..2343303) Pseudomonas putida HB3267 14288532 YP_007228985.1 CDS B479_10710 NC_019905.1 2347743 2347964 D hypothetical protein 2347743..2347964 Pseudomonas putida HB3267 14288533 YP_007228986.1 CDS B479_10715 NC_019905.1 2348315 2349079 R hypothetical protein complement(2348315..2349079) Pseudomonas putida HB3267 14288534 YP_007228987.1 CDS B479_10720 NC_019905.1 2349143 2350420 R COG2873 O-acetylhomoserine sulfhydrylase; O-acetylhomoserine aminocarboxypropyltransferase complement(2349143..2350420) Pseudomonas putida HB3267 14288535 YP_007228988.1 CDS B479_10725 NC_019905.1 2350538 2350975 R hypothetical protein complement(2350538..2350975) Pseudomonas putida HB3267 14288536 YP_007228989.1 CDS B479_10730 NC_019905.1 2351039 2351728 R hypothetical protein complement(2351039..2351728) Pseudomonas putida HB3267 14288537 YP_007228990.1 CDS B479_10735 NC_019905.1 2351909 2352625 R COG4126 Hydantoin racemase; racemase complement(2351909..2352625) Pseudomonas putida HB3267 14288538 YP_007228991.1 CDS B479_10740 NC_019905.1 2352622 2353818 R COG3535 Uncharacterized conserved protein; hypothetical protein complement(2352622..2353818) Pseudomonas putida HB3267 14288539 YP_007228992.1 CDS B479_10745 NC_019905.1 2353849 2356107 R COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; putative sigma-54 specific transcriptional regulator complement(2353849..2356107) Pseudomonas putida HB3267 14288540 YP_007228993.1 CDS B479_10750 NC_019905.1 2356206 2356553 D hypothetical protein 2356206..2356553 Pseudomonas putida HB3267 14288541 YP_007228994.1 CDS B479_10755 NC_019905.1 2356677 2357123 D hypothetical protein 2356677..2357123 Pseudomonas putida HB3267 14288542 YP_007228995.1 CDS B479_10760 NC_019905.1 2357222 2358193 R COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; AraC family transcriptional regulator complement(2357222..2358193) Pseudomonas putida HB3267 14288543 YP_007228996.1 CDS B479_10765 NC_019905.1 2358324 2358965 D COG1480 Predicted membrane-associated HD superfamily hydrolase; metal dependent phosphohydrolase 2358324..2358965 Pseudomonas putida HB3267 14288544 YP_007228997.1 CDS B479_10770 NC_019905.1 2359082 2360068 R 5'-nucleotidase complement(2359082..2360068) Pseudomonas putida HB3267 14288545 YP_007228998.1 CDS B479_10775 NC_019905.1 2360151 2360642 R hypothetical protein complement(2360151..2360642) Pseudomonas putida HB3267 14288546 YP_007228999.1 CDS B479_10790 NC_019905.1 2361840 2363015 D COG2814 Arabinose efflux permease; major facilitator superfamily transporter 2361840..2363015 Pseudomonas putida HB3267 14288547 YP_007229000.1 CDS B479_10795 NC_019905.1 2363146 2363769 R COG0625 Glutathione S-transferase; glutathione S-transferase domain-containing protein complement(2363146..2363769) Pseudomonas putida HB3267 14288548 YP_007229001.1 CDS B479_10800 NC_019905.1 2363967 2364269 D hypothetical protein 2363967..2364269 Pseudomonas putida HB3267 14288549 YP_007229002.1 CDS B479_10805 NC_019905.1 2364348 2365070 D hypothetical protein 2364348..2365070 Pseudomonas putida HB3267 14288550 YP_007229003.1 CDS B479_10810 NC_019905.1 2365170 2365649 R COG1943 Transposase and inactivated derivatives; hypothetical protein complement(2365170..2365649) Pseudomonas putida HB3267 14288551 YP_007229004.1 CDS B479_10815 NC_019905.1 2365906 2366448 R transcriptional factor-like protein complement(2365906..2366448) Pseudomonas putida HB3267 14288552 YP_007229005.1 CDS B479_10820 NC_019905.1 2367184 2368377 D COG2814 Arabinose efflux permease; major facilitator superfamily transporter 2367184..2368377 Pseudomonas putida HB3267 14288553 YP_007229006.1 CDS B479_10825 NC_019905.1 2368408 2369514 D COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; NADH:flavin oxidoreductase 2368408..2369514 Pseudomonas putida HB3267 14288554 YP_007229007.1 CDS B479_10830 NC_019905.1 2369758 2370003 D COG2161 Antitoxin of toxin-antitoxin stability system; hypothetical protein 2369758..2370003 Pseudomonas putida HB3267 14288555 YP_007229008.1 CDS B479_10835 NC_019905.1 2369993 2370274 D COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system; hypothetical protein 2369993..2370274 Pseudomonas putida HB3267 14288556 YP_007229009.1 CDS B479_10840 NC_019905.1 2370290 2370922 R COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase complement(2370290..2370922) Pseudomonas putida HB3267 14288557 YP_007229010.1 CDS B479_10845 NC_019905.1 2370939 2371109 R hypothetical protein complement(2370939..2371109) Pseudomonas putida HB3267 14288558 YP_007229011.1 CDS B479_10850 NC_019905.1 2371423 2372331 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2371423..2372331) Pseudomonas putida HB3267 14288559 YP_007229012.1 CDS B479_10855 NC_019905.1 2372623 2373927 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 2372623..2373927 Pseudomonas putida HB3267 14288560 YP_007229013.1 CDS B479_10860 NC_019905.1 2373958 2375199 D COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; allantoate amidohydrolase 2373958..2375199 Pseudomonas putida HB3267 14288561 YP_007229014.1 CDS B479_10865 NC_019905.1 2375199 2376221 D COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein; histone deacetylase superfamily protein 2375199..2376221 Pseudomonas putida HB3267 14288562 YP_007229015.1 CDS B479_10870 NC_019905.1 2376565 2377989 R COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; GntR family transcriptional regulator complement(2376565..2377989) Pseudomonas putida HB3267 14288563 YP_007229016.1 CDS B479_10875 NC_019905.1 2378312 2379721 D COG1113 Gamma-aminobutyrate permease and related permeases; amino acid permease-associated protein 2378312..2379721 Pseudomonas putida HB3267 14288564 YP_007229017.1 CDS B479_10880 NC_019905.1 2379851 2380627 D COG4106 Trans-aconitate methyltransferase; trans-aconitate 2-methyltransferase 2379851..2380627 Pseudomonas putida HB3267 14288565 YP_007229018.1 CDS B479_10885 NC_019905.1 2380617 2380988 R hypothetical protein complement(2380617..2380988) Pseudomonas putida HB3267 14288566 YP_007229019.1 CDS B479_10890 NC_019905.1 2381145 2382014 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2381145..2382014) Pseudomonas putida HB3267 14288567 YP_007229020.1 CDS B479_10895 NC_019905.1 2382258 2383574 D COG2271 Sugar phosphate permease; major facilitator superfamily transporter 2382258..2383574 Pseudomonas putida HB3267 14288568 YP_007229021.1 CDS B479_10900 NC_019905.1 2383590 2384981 D COG0665 Glycine/D-amino acid oxidases (deaminating); aminophosphonate oxidoreductase 2383590..2384981 Pseudomonas putida HB3267 14288569 YP_007229022.1 CDS B479_10905 NC_019905.1 2385208 2385918 D COG0217 Uncharacterized conserved protein; hypothetical protein 2385208..2385918 Pseudomonas putida HB3267 14288570 YP_007229023.1 CDS B479_10910 NC_019905.1 2386063 2387007 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 2386063..2387007 Pseudomonas putida HB3267 14288571 YP_007229024.1 CDS B479_10915 NC_019905.1 2387128 2388540 D COG0076 Glutamate decarboxylase and related PLP-dependent proteins; aromatic-L-amino-acid decarboxylase 2387128..2388540 Pseudomonas putida HB3267 14288572 YP_007229025.1 CDS B479_10920 NC_019905.1 2388815 2390188 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(2388815..2390188) Pseudomonas putida HB3267 14288573 YP_007229026.1 CDS B479_10925 NC_019905.1 2390563 2392470 D COG1082 Sugar phosphate isomerases/epimerases; 4-hydroxyphenylpyruvate dioxygenase 2390563..2392470 Pseudomonas putida HB3267 14288574 YP_007229027.1 CDS B479_10930 NC_019905.1 2392615 2393283 R COG0500 SAM-dependent methyltransferases; type 12 methyltransferase complement(2392615..2393283) Pseudomonas putida HB3267 14288575 YP_007229028.1 CDS B479_10935 NC_019905.1 2393423 2394781 R COG2059 Chromate transport protein ChrA; chromate transporter complement(2393423..2394781) Pseudomonas putida HB3267 14288576 YP_007229029.1 CDS B479_10940 NC_019905.1 2394799 2395617 R COG2202 FOG: PAS/PAC domain; PAS/PAC sensor-containing diguanylate cyclase complement(2394799..2395617) Pseudomonas putida HB3267 14288577 YP_007229030.1 CDS B479_10945 NC_019905.1 2395753 2397081 R COG1538 Outer membrane protein; TolC family type I secretion outer membrane protein complement(2395753..2397081) Pseudomonas putida HB3267 14288578 YP_007229031.1 CDS B479_10950 NC_019905.1 2397083 2398423 R COG0845 Membrane-fusion protein; HlyD family type I secretion membrane fusion protein complement(2397083..2398423) Pseudomonas putida HB3267 14288579 YP_007229032.1 CDS B479_10955 NC_019905.1 2398430 2400166 R COG4618 ABC-type protease/lipase transport system, ATPase and permease components; type I secretion system ATPase complement(2398430..2400166) Pseudomonas putida HB3267 14288580 YP_007229033.1 CDS B479_10960 NC_019905.1 2400715 2411472 D COG2931 RTX toxins and related Ca2+-binding proteins; heme peroxidase 2400715..2411472 Pseudomonas putida HB3267 14288581 YP_007229034.1 CDS B479_10965 NC_019905.1 2411676 2411918 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 2411676..2411918 Pseudomonas putida HB3267 14288582 YP_007229035.1 CDS B479_10970 NC_019905.1 2411980 2412465 D COG1335 Amidases related to nicotinamidase; hypothetical protein 2411980..2412465 Pseudomonas putida HB3267 14288583 YP_007229036.1 CDS B479_10975 NC_019905.1 2412628 2413326 R COG1741 Pirin-related protein; pirin domain-containing protein complement(2412628..2413326) Pseudomonas putida HB3267 14288584 YP_007229037.1 CDS B479_10980 NC_019905.1 2413502 2416018 D COG0210 Superfamily I DNA and RNA helicases; UvrD/REP helicase 2413502..2416018 Pseudomonas putida HB3267 14288585 YP_007229038.1 CDS B479_10985 NC_019905.1 2416026 2420828 R COG4886 Leucine-rich repeat (LRR) protein; hypothetical protein complement(2416026..2420828) Pseudomonas putida HB3267 14288586 YP_007229039.1 CDS B479_10990 NC_019905.1 2421152 2422078 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold protein 2421152..2422078 Pseudomonas putida HB3267 14288587 YP_007229040.1 CDS B479_10995 NC_019905.1 2422389 2422814 D COG0346 Lactoylglutathione lyase and related lyases; glyoxalase/bleomycin resistance protein/dioxygenase 2422389..2422814 Pseudomonas putida HB3267 14288588 YP_007229041.1 CDS B479_11000 NC_019905.1 2423028 2424704 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 2423028..2424704 Pseudomonas putida HB3267 14288589 YP_007229042.1 CDS B479_11005 NC_019905.1 2424816 2425385 R hypothetical protein complement(2424816..2425385) Pseudomonas putida HB3267 14288590 YP_007229043.1 CDS B479_11010 NC_019905.1 2425497 2426174 D hypothetical protein 2425497..2426174 Pseudomonas putida HB3267 14288591 YP_007229044.1 CDS B479_11015 NC_019905.1 2426164 2427624 D COG1022 Long-chain acyl-CoA synthetases (AMP-forming); long-chain-fatty-acid-CoA ligase 2426164..2427624 Pseudomonas putida HB3267 14288592 YP_007229045.1 CDS B479_11020 NC_019905.1 2427640 2428320 D hypothetical protein 2427640..2428320 Pseudomonas putida HB3267 14288593 YP_007229046.1 CDS B479_11025 NC_019905.1 2428307 2429113 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short chain dehydrogenase 2428307..2429113 Pseudomonas putida HB3267 14288594 YP_007229047.1 CDS B479_11030 NC_019905.1 2429110 2429751 D COG0457 FOG: TPR repeat; hypothetical protein 2429110..2429751 Pseudomonas putida HB3267 14288595 YP_007229048.1 CDS B479_11035 NC_019905.1 2429754 2430416 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component transcriptional regulator 2429754..2430416 Pseudomonas putida HB3267 14288596 YP_007229049.1 CDS B479_11040 NC_019905.1 2430413 2431780 D COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2430413..2431780 Pseudomonas putida HB3267 14288597 YP_007229050.1 CDS B479_11045 NC_019905.1 2431788 2432174 R COG0346 Lactoylglutathione lyase and related lyases; glyoxalase/bleomycin resistance protein/dioxygenase complement(2431788..2432174) Pseudomonas putida HB3267 14288598 YP_007229051.1 CDS B479_11050 NC_019905.1 2432380 2432565 D hypothetical protein 2432380..2432565 Pseudomonas putida HB3267 14288599 YP_007229052.1 CDS B479_11055 NC_019905.1 2432714 2433619 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 2432714..2433619 Pseudomonas putida HB3267 14288600 YP_007229053.1 CDS B479_11060 NC_019905.1 2433658 2434131 R hypothetical protein complement(2433658..2434131) Pseudomonas putida HB3267 14288601 YP_007229054.1 CDS B479_11065 NC_019905.1 2434282 2434878 D COG2995 Uncharacterized paraquat-inducible protein A; paraquat-inducible protein A 2434282..2434878 Pseudomonas putida HB3267 14288602 YP_007229055.1 CDS B479_11070 NC_019905.1 2434875 2435519 D COG2995 Uncharacterized paraquat-inducible protein A; paraquat-inducible protein A 2434875..2435519 Pseudomonas putida HB3267 14288603 YP_007229056.1 CDS B479_11075 NC_019905.1 2435503 2437143 D COG3008 Paraquat-inducible protein B; hypothetical protein 2435503..2437143 Pseudomonas putida HB3267 14288604 YP_007229057.1 CDS B479_11080 NC_019905.1 2437155 2437688 D hypothetical protein 2437155..2437688 Pseudomonas putida HB3267 14288605 YP_007229058.1 CDS B479_11085 NC_019905.1 2437827 2439569 R COG2194 Predicted membrane-associated, metal-dependent hydrolase; hypothetical protein complement(2437827..2439569) Pseudomonas putida HB3267 14288606 YP_007229059.1 CDS B479_11090 NC_019905.1 2439759 2439905 D hypothetical protein 2439759..2439905 Pseudomonas putida HB3267 14288607 YP_007229060.1 CDS B479_11095 NC_019905.1 2440063 2440431 R hypothetical protein complement(2440063..2440431) Pseudomonas putida HB3267 14288608 YP_007229061.1 CDS B479_11100 NC_019905.1 2440718 2441209 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; DNA internalization-related competence protein ComEC/Rec2 2440718..2441209 Pseudomonas putida HB3267 14288609 YP_007229062.1 CDS B479_11105 NC_019905.1 2441270 2442583 R COG0402 Cytosine deaminase and related metal-dependent hydrolases; hydroxydechloroatrazine ethylaminohydrolase complement(2441270..2442583) Pseudomonas putida HB3267 14288610 YP_007229063.1 CDS B479_11110 NC_019905.1 2442803 2444098 R COG0531 Amino acid transporters; amino acid permease-associated protein complement(2442803..2444098) Pseudomonas putida HB3267 14288611 YP_007229064.1 CDS B479_11115 NC_019905.1 2444476 2445306 D COG2771 DNA-binding HTH domain-containing proteins; LuxR family transcriptional regulator 2444476..2445306 Pseudomonas putida HB3267 14288612 YP_007229065.1 CDS B479_11120 NC_019905.1 2445349 2446731 D COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; aminotransferase 2445349..2446731 Pseudomonas putida HB3267 14288613 YP_007229066.1 CDS B479_11125 NC_019905.1 2446910 2448403 D COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase family protein 2446910..2448403 Pseudomonas putida HB3267 14288614 YP_007229067.1 CDS B479_11130 NC_019905.1 2448673 2451558 D COG0840 Methyl-accepting chemotaxis protein; metal dependent phosphohydrolase 2448673..2451558 Pseudomonas putida HB3267 14288615 YP_007229068.1 CDS B479_11135 NC_019905.1 2452079 2452342 D hypothetical protein 2452079..2452342 Pseudomonas putida HB3267 14288616 YP_007229069.1 CDS B479_11140 NC_019905.1 2452537 2454249 R COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; FAD-binding dehydrogenase complement(2452537..2454249) Pseudomonas putida HB3267 14288617 YP_007229070.1 CDS B479_11145 NC_019905.1 2454444 2455220 D COG1414 Transcriptional regulator; IclR family transcriptional regulator 2454444..2455220 Pseudomonas putida HB3267 14288618 YP_007229071.1 CDS B479_11150 NC_019905.1 2455361 2456413 D COG0673 Predicted dehydrogenases and related proteins; oxidoreductase domain-containing protein 2455361..2456413 Pseudomonas putida HB3267 14288619 YP_007229072.1 CDS B479_11155 NC_019905.1 2456431 2457246 D COG1082 Sugar phosphate isomerases/epimerases; xylose isomerase domain-containing protein 2456431..2457246 Pseudomonas putida HB3267 14288620 YP_007229073.1 CDS B479_11160 NC_019905.1 2457605 2458930 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(2457605..2458930) Pseudomonas putida HB3267 14288621 YP_007229074.1 CDS B479_11165 NC_019905.1 2459122 2460801 R COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein complement(2459122..2460801) Pseudomonas putida HB3267 14288622 YP_007229075.1 CDS B479_11170 NC_019905.1 2460841 2461161 R NIPSNAP family protein complement(2460841..2461161) Pseudomonas putida HB3267 14288623 YP_007229076.1 CDS B479_11175 NC_019905.1 2461146 2462879 R COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein complement(2461146..2462879) Pseudomonas putida HB3267 14288624 YP_007229077.1 CDS B479_11180 NC_019905.1 2462884 2463693 R COG0169 Shikimate 5-dehydrogenase; shikimate dehydrogenase complement(2462884..2463693) Pseudomonas putida HB3267 14288625 YP_007229078.1 CDS B479_11185 NC_019905.1 2463848 2464618 D COG1414 Transcriptional regulator; IclR family transcriptional regulator 2463848..2464618 Pseudomonas putida HB3267 14288626 YP_007229079.1 CDS B479_11190 NC_019905.1 2464858 2465901 R COG1840 ABC-type Fe3+ transport system, periplasmic component; extracellular solute-binding protein complement(2464858..2465901) Pseudomonas putida HB3267 14288627 YP_007229080.1 CDS B479_11195 NC_019905.1 2465898 2467031 R COG0665 Glycine/D-amino acid oxidases (deaminating); FAD dependent oxidoreductase complement(2465898..2467031) Pseudomonas putida HB3267 14288628 YP_007229081.1 CDS B479_11200 NC_019905.1 2467028 2468386 R COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; BFD/(2Fe-2S)-binding domain-containing protein complement(2467028..2468386) Pseudomonas putida HB3267 14288629 YP_007229082.1 CDS B479_11205 NC_019905.1 2468383 2468673 R COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; hypothetical protein complement(2468383..2468673) Pseudomonas putida HB3267 14288630 YP_007229083.1 CDS B479_11210 NC_019905.1 2468688 2469482 R COG1177 ABC-type spermidine/putrescine transport system, permease component II; binding-protein-dependent transport system inner membrane protein complement(2468688..2469482) Pseudomonas putida HB3267 14288631 YP_007229084.1 CDS B479_11215 NC_019905.1 2469487 2470356 R COG1176 ABC-type spermidine/putrescine transport system, permease component I; binding-protein-dependent transport system inner membrane protein complement(2469487..2470356) Pseudomonas putida HB3267 14288632 YP_007229085.1 CDS B479_11220 NC_019905.1 2470353 2471372 R COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; ABC transporter ATP-binding protein complement(2470353..2471372) Pseudomonas putida HB3267 14288633 YP_007229086.1 CDS B479_11225 NC_019905.1 2471622 2472449 D COG1414 Transcriptional regulator; IclR family transcriptional regulator 2471622..2472449 Pseudomonas putida HB3267 14288634 YP_007229087.1 CDS B479_11230 NC_019905.1 2472678 2474531 R COG1132 ABC-type multidrug transport system, ATPase and permease components; ABC transporter ATP-binding protein complement(2472678..2474531) Pseudomonas putida HB3267 14288635 YP_007229088.1 CDS B479_11235 NC_019905.1 2474775 2475692 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2474775..2475692) Pseudomonas putida HB3267 14288636 YP_007229089.1 CDS B479_11240 NC_019905.1 2475812 2476570 D COG1540 Uncharacterized proteins, homologs of lactam utilization protein B; hypothetical protein 2475812..2476570 Pseudomonas putida HB3267 14288637 YP_007229090.1 CDS B479_11245 NC_019905.1 2476661 2477548 D COG2049 Allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 2476661..2477548 Pseudomonas putida HB3267 14288638 YP_007229091.1 CDS B479_11250 NC_019905.1 2477545 2478516 D COG1984 Allophanate hydrolase subunit 2; acetyltransferase subunit 2477545..2478516 Pseudomonas putida HB3267 14288639 YP_007229092.1 CDS B479_11255 NC_019905.1 2478749 2479621 D COG3455 Uncharacterized protein conserved in bacteria; hypothetical protein 2478749..2479621 Pseudomonas putida HB3267 14288640 YP_007229093.1 CDS B479_11260 NC_019905.1 2479636 2481714 D COG3501 Uncharacterized protein conserved in bacteria; ImpA family type VI secretion-associated protein 2479636..2481714 Pseudomonas putida HB3267 14288641 YP_007229094.1 CDS B479_11265 NC_019905.1 2481714 2482637 D hypothetical protein 2481714..2482637 Pseudomonas putida HB3267 14288642 YP_007229095.1 CDS B479_11270 NC_019905.1 2482634 2485858 D hypothetical protein 2482634..2485858 Pseudomonas putida HB3267 14288643 YP_007229096.1 CDS B479_11275 NC_019905.1 2486197 2486664 D hypothetical protein 2486197..2486664 Pseudomonas putida HB3267 14288644 YP_007229097.1 CDS B479_11280 NC_019905.1 2486661 2486918 D COG4104 Uncharacterized conserved protein; hypothetical protein 2486661..2486918 Pseudomonas putida HB3267 14288645 YP_007229098.1 CDS B479_11285 NC_019905.1 2487296 2488162 D COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthase 2487296..2488162 Pseudomonas putida HB3267 14288646 YP_007229099.1 CDS B479_11290 NC_019905.1 2488377 2490059 R COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; iron-sulfur cluster-binding protein complement(2488377..2490059) Pseudomonas putida HB3267 14288647 YP_007229100.1 CDS B479_11295 NC_019905.1 2490132 2491679 D COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; GntR family transcriptional regulator 2490132..2491679 Pseudomonas putida HB3267 14288648 YP_007229101.1 CDS B479_11300 NC_019905.1 2491805 2493049 R hypothetical protein complement(2491805..2493049) Pseudomonas putida HB3267 14288649 YP_007229102.1 CDS B479_11305 NC_019905.1 2493239 2493637 R COG0457 FOG: TPR repeat; hypothetical protein complement(2493239..2493637) Pseudomonas putida HB3267 14288650 YP_007229103.1 CDS B479_11310 NC_019905.1 2493891 2495516 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2493891..2495516 Pseudomonas putida HB3267 14288651 YP_007229104.1 CDS B479_11315 NC_019905.1 2495625 2495945 R hypothetical protein complement(2495625..2495945) Pseudomonas putida HB3267 14288652 YP_007229105.1 CDS B479_11320 NC_019905.1 2496093 2497994 R COG3158 K+ transporter; Kup system potassium uptake protein complement(2496093..2497994) Pseudomonas putida HB3267 14288653 YP_007229106.1 CDS B479_11325 NC_019905.1 2498173 2499399 R COG2814 Arabinose efflux permease; major facilitator superfamily transporter complement(2498173..2499399) Pseudomonas putida HB3267 14288654 YP_007229107.1 CDS B479_11330 NC_019905.1 2499771 2500646 R COG0589 Universal stress protein UspA and related nucleotide-binding proteins; universal stress protein complement(2499771..2500646) Pseudomonas putida HB3267 14288655 YP_007229108.1 CDS B479_11335 NC_019905.1 2500892 2501125 D hypothetical protein 2500892..2501125 Pseudomonas putida HB3267 14288656 YP_007229109.1 CDS B479_11340 NC_019905.1 2501222 2501599 R COG3668 Plasmid stabilization system protein; hypothetical protein complement(2501222..2501599) Pseudomonas putida HB3267 14288657 YP_007229110.1 CDS B479_11345 NC_019905.1 2501890 2502921 D COG0226 ABC-type phosphate transport system, periplasmic component; phosphate ABC transporter substrate-binding protein 2501890..2502921 Pseudomonas putida HB3267 14288658 YP_007229111.1 CDS B479_11350 NC_019905.1 2502994 2503959 D COG0573 ABC-type phosphate transport system, permease component; phosphate ABC transporter permease 2502994..2503959 Pseudomonas putida HB3267 14288659 YP_007229112.1 CDS B479_11355 NC_019905.1 2503959 2504852 D COG0581 ABC-type phosphate transport system, permease component; phosphate ABC transporter permease 2503959..2504852 Pseudomonas putida HB3267 14288660 YP_007229113.1 CDS B479_11360 NC_019905.1 2504904 2505689 D COG1117 ABC-type phosphate transport system, ATPase component; phosphate ABC transporter ATP-binding protein 2504904..2505689 Pseudomonas putida HB3267 14288661 YP_007229114.1 CDS B479_11365 NC_019905.1 2505783 2506481 D COG3177 Uncharacterized conserved protein; hypothetical protein 2505783..2506481 Pseudomonas putida HB3267 14288662 YP_007229115.1 CDS B479_11370 NC_019905.1 2506481 2507080 D COG0637 Predicted phosphatase/phosphohexomutase; hypothetical protein 2506481..2507080 Pseudomonas putida HB3267 14288663 YP_007229116.1 CDS B479_11375 NC_019905.1 2507241 2507795 D COG1396 Predicted transcriptional regulators; XRE family transcriptional regulator 2507241..2507795 Pseudomonas putida HB3267 14288664 YP_007229117.1 CDS B479_11380 NC_019905.1 2507823 2509169 D COG0174 Glutamine synthetase; glutamine synthetase 2507823..2509169 Pseudomonas putida HB3267 14288665 YP_007229118.1 CDS B479_11385 NC_019905.1 2509254 2510027 D COG2071 Predicted glutamine amidotransferases; peptidase C26 2509254..2510027 Pseudomonas putida HB3267 14288666 YP_007229119.1 CDS B479_11390 NC_019905.1 2510097 2511455 D COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; aminotransferase 2510097..2511455 Pseudomonas putida HB3267 14288667 YP_007229120.1 CDS B479_11395 NC_019905.1 2511684 2512238 D COG1396 Predicted transcriptional regulators; XRE family transcriptional regulator 2511684..2512238 Pseudomonas putida HB3267 14288668 YP_007229121.1 CDS B479_11400 NC_019905.1 2512265 2513035 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain dehydrogenase/reductase SDR complement(2512265..2513035) Pseudomonas putida HB3267 14288669 YP_007229122.1 CDS B479_11405 NC_019905.1 2513179 2513715 D hypothetical protein 2513179..2513715 Pseudomonas putida HB3267 14288670 YP_007229123.1 CDS B479_11410 NC_019905.1 2513759 2515285 D COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photolyase-like protein 2513759..2515285 Pseudomonas putida HB3267 14288671 YP_007229124.1 CDS B479_11415 NC_019905.1 2515282 2515464 D COG4338 Uncharacterized protein conserved in bacteria; hypothetical protein 2515282..2515464 Pseudomonas putida HB3267 14288672 YP_007229125.1 CDS B479_11420 NC_019905.1 2515402 2515890 R hypothetical protein complement(2515402..2515890) Pseudomonas putida HB3267 14288673 YP_007229126.1 CDS B479_11425 NC_019905.1 2515890 2517152 R COG2230 Cyclopropane fatty acid synthase and related methyltransferases; cyclopropane-fatty-acyl-phospholipid synthase complement(2515890..2517152) Pseudomonas putida HB3267 14288674 YP_007229127.1 CDS B479_11430 NC_019905.1 2517127 2517936 R COG3496 Uncharacterized conserved protein; hypothetical protein complement(2517127..2517936) Pseudomonas putida HB3267 14288675 YP_007229128.1 CDS B479_11435 NC_019905.1 2517933 2519180 R COG2907 Predicted NAD/FAD-binding protein; amine oxidase complement(2517933..2519180) Pseudomonas putida HB3267 14288676 YP_007229129.1 CDS B479_11440 NC_019905.1 2519187 2519939 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain dehydrogenase/reductase complement(2519187..2519939) Pseudomonas putida HB3267 14288677 YP_007229130.1 CDS B479_11445 NC_019905.1 2519936 2520358 R hypothetical protein complement(2519936..2520358) Pseudomonas putida HB3267 14288678 YP_007229131.1 CDS B479_11450 NC_019905.1 2520461 2520907 R COG2202 FOG: PAS/PAC domain; putative PAS/PAC sensor protein complement(2520461..2520907) Pseudomonas putida HB3267 14288679 YP_007229132.1 CDS B479_11455 NC_019905.1 2521062 2521949 D COG0789 Predicted transcriptional regulators; MerR family transcriptional regulator 2521062..2521949 Pseudomonas putida HB3267 14288680 YP_007229133.1 CDS B479_11460 NC_019905.1 2522167 2523351 D hypothetical protein 2522167..2523351 Pseudomonas putida HB3267 14288681 YP_007229134.1 CDS B479_11465 NC_019905.1 2523621 2524784 D COG3287 Uncharacterized conserved protein; hypothetical protein 2523621..2524784 Pseudomonas putida HB3267 14288682 YP_007229135.1 CDS B479_11470 NC_019905.1 2524753 2526648 D COG0642 Signal transduction histidine kinase; PAS/PAC sensor hybrid histidine kinase 2524753..2526648 Pseudomonas putida HB3267 14288683 YP_007229136.1 CDS B479_11475 NC_019905.1 2526819 2527484 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; two component LuxR family transcriptional regulator complement(2526819..2527484) Pseudomonas putida HB3267 14288684 YP_007229137.1 CDS B479_11480 NC_019905.1 2527542 2528102 R COG0607 Rhodanese-related sulfurtransferase; hypothetical protein complement(2527542..2528102) Pseudomonas putida HB3267 14288685 YP_007229138.1 CDS B479_11485 NC_019905.1 2528407 2529198 R COG0842 ABC-type multidrug transport system, permease component; ABC transporter complement(2528407..2529198) Pseudomonas putida HB3267 14288686 YP_007229139.1 CDS B479_11490 NC_019905.1 2529195 2529935 R COG1131 ABC-type multidrug transport system, ATPase component; efflux ABC transporter ATP-binding protein complement(2529195..2529935) Pseudomonas putida HB3267 14288687 YP_007229140.1 CDS B479_11495 NC_019905.1 2529932 2530921 R COG3391 Uncharacterized conserved protein; hypothetical protein complement(2529932..2530921) Pseudomonas putida HB3267 14288688 YP_007229141.1 CDS B479_11500 NC_019905.1 2530953 2532146 R ABC-type branched-chain amino acid transport systems periplasmic compoment-like protein complement(2530953..2532146) Pseudomonas putida HB3267 14288689 YP_007229142.1 CDS B479_11505 NC_019905.1 2532298 2533572 D COG4585 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2532298..2533572 Pseudomonas putida HB3267 14288690 YP_007229143.1 CDS B479_11510 NC_019905.1 2533572 2534210 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; two component LuxR family transcriptional regulator 2533572..2534210 Pseudomonas putida HB3267 14288691 YP_007229144.1 CDS B479_11515 NC_019905.1 2534390 2535049 R COG1357 Uncharacterized low-complexity proteins; pentapeptide repeat-containing protein complement(2534390..2535049) Pseudomonas putida HB3267 14288692 YP_007229145.1 CDS B479_11520 NC_019905.1 2535228 2537069 R COG4993 Glucose dehydrogenase; quinoprotein ethanol dehydrogenase complement(2535228..2537069) Pseudomonas putida HB3267 14288693 YP_007229146.1 CDS B479_11525 NC_019905.1 2537399 2537839 D COG2010 Cytochrome c, mono- and diheme variants; cytochrome c class I 2537399..2537839 Pseudomonas putida HB3267 14288694 YP_007229147.1 CDS B479_11530 NC_019905.1 2537845 2538720 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; extracellular solute-binding protein 2537845..2538720 Pseudomonas putida HB3267 14288695 YP_007229148.1 CDS B479_11535 NC_019905.1 2538883 2539650 D hypothetical protein 2538883..2539650 Pseudomonas putida HB3267 14288696 YP_007229149.1 CDS B479_11540 NC_019905.1 2539691 2540629 D COG0491 Zn-dependent hydrolases, including glyoxylases; beta-lactamase domain-containing protein 2539691..2540629 Pseudomonas putida HB3267 14288697 YP_007229150.1 CDS B479_11545 NC_019905.1 2540816 2542576 D COG4993 Glucose dehydrogenase; putative quinoprotein ethanol dehydrogenase 2540816..2542576 Pseudomonas putida HB3267 14288698 YP_007229151.1 CDS B479_11550 NC_019905.1 2542739 2544259 D COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase 2542739..2544259 Pseudomonas putida HB3267 14288699 YP_007229152.1 CDS B479_11555 NC_019905.1 2544532 2544603 D coenzyme PQQ biosynthesis protein A 2544532..2544603 Pseudomonas putida HB3267 14288700 YP_007229153.1 CDS B479_11560 NC_019905.1 2544656 2544928 D pyrroloquinoline quinone biosynthesis protein PqqD 2544656..2544928 Pseudomonas putida HB3267 14288701 YP_007229154.1 CDS B479_11565 NC_019905.1 2545018 2546181 D COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 2545018..2546181 Pseudomonas putida HB3267 14288702 YP_007229155.1 CDS B479_11570 NC_019905.1 2546165 2547892 D COG0642 Signal transduction histidine kinase; PAS/PAC sensor hybrid histidine kinase 2546165..2547892 Pseudomonas putida HB3267 14288703 YP_007229156.1 CDS B479_11575 NC_019905.1 2548130 2549782 R COG0659 Sulfate permease and related transporters (MFS superfamily); sulfate permease complement(2548130..2549782) Pseudomonas putida HB3267 14288704 YP_007229157.1 CDS B479_11580 NC_019905.1 2550549 2551163 D hypothetical protein 2550549..2551163 Pseudomonas putida HB3267 14288705 YP_007229158.1 CDS B479_11585 NC_019905.1 2551324 2551566 D hypothetical protein 2551324..2551566 Pseudomonas putida HB3267 14288706 YP_007229159.1 CDS B479_11590 NC_019905.1 2551563 2552357 D COG0708 Exonuclease III; exodeoxyribonuclease III 2551563..2552357 Pseudomonas putida HB3267 14288707 YP_007229160.1 CDS B479_11595 NC_019905.1 2552376 2552804 R hypothetical protein complement(2552376..2552804) Pseudomonas putida HB3267 14288708 YP_007229161.1 CDS B479_11600 NC_019905.1 2552831 2553940 R COG0668 Small-conductance mechanosensitive channel; mechanosensitive ion channel protein MscS complement(2552831..2553940) Pseudomonas putida HB3267 14288709 YP_007229162.1 CDS B479_11605 NC_019905.1 2554234 2554479 R hypothetical protein complement(2554234..2554479) Pseudomonas putida HB3267 14288710 YP_007229163.1 CDS B479_11610 NC_019905.1 2554479 2554943 R COG2846 Regulator of cell morphogenesis and NO signaling; hemerythrin HHE cation binding domain-containing protein complement(2554479..2554943) Pseudomonas putida HB3267 14288711 YP_007229164.1 CDS B479_11615 NC_019905.1 2555376 2555879 R COG1546 Uncharacterized protein (competence- and mitomycin-induced); CinA domain-containing protein complement(2555376..2555879) Pseudomonas putida HB3267 14288712 YP_007229165.1 CDS B479_11620 NC_019905.1 2556066 2556299 D hypothetical protein 2556066..2556299 Pseudomonas putida HB3267 14288713 YP_007229166.1 CDS B479_11625 NC_019905.1 2556596 2557795 R COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; alcohol dehydrogenase complement(2556596..2557795) Pseudomonas putida HB3267 14288714 YP_007229167.1 CDS B479_11630 NC_019905.1 2558040 2558717 D COG3647 Predicted membrane protein; hypothetical protein 2558040..2558717 Pseudomonas putida HB3267 14288715 YP_007229168.1 CDS B479_11635 NC_019905.1 2559068 2559553 D 17 kDa surface antigen 2559068..2559553 Pseudomonas putida HB3267 14288716 YP_007229169.1 CDS B479_11640 NC_019905.1 2559604 2560434 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(2559604..2560434) Pseudomonas putida HB3267 14288717 YP_007229170.1 CDS B479_11645 NC_019905.1 2560565 2561083 D COG2128 Uncharacterized conserved protein; alkylhydroperoxidase 2560565..2561083 Pseudomonas putida HB3267 14288718 YP_007229171.1 CDS B479_11650 NC_019905.1 2561097 2561351 D COG0695 Glutaredoxin and related proteins; glutaredoxin 3 2561097..2561351 Pseudomonas putida HB3267 14288719 YP_007229172.1 CDS B479_11655 NC_019905.1 2561472 2562488 R COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; AraC family transcriptional regulator complement(2561472..2562488) Pseudomonas putida HB3267 14288720 YP_007229173.1 CDS B479_11660 NC_019905.1 2562712 2564097 R COG1113 Gamma-aminobutyrate permease and related permeases; gamma-aminobutyrate permease complement(2562712..2564097) Pseudomonas putida HB3267 14288721 YP_007229174.1 CDS B479_11665 NC_019905.1 2564181 2564954 R COG1402 Uncharacterized protein, putative amidase; creatininase complement(2564181..2564954) Pseudomonas putida HB3267 14288722 YP_007229175.1 CDS B479_11670 NC_019905.1 2565286 2565849 D COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; hypothetical protein 2565286..2565849 Pseudomonas putida HB3267 14288723 YP_007229176.1 CDS B479_11675 NC_019905.1 2566049 2567260 D COG0006 Xaa-Pro aminopeptidase; creatinase 2566049..2567260 Pseudomonas putida HB3267 14288724 YP_007229177.1 CDS B479_11680 NC_019905.1 2567353 2567733 R COG0662 Mannose-6-phosphate isomerase; hypothetical protein complement(2567353..2567733) Pseudomonas putida HB3267 14288725 YP_007229178.1 CDS B479_11685 NC_019905.1 2567844 2568695 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 2567844..2568695 Pseudomonas putida HB3267 14288726 YP_007229179.1 CDS B479_11690 NC_019905.1 2568795 2568995 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2568795..2568995) Pseudomonas putida HB3267 14288727 YP_007229180.1 CDS B479_11695 NC_019905.1 2569045 2569254 D COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases; alcohol dehydrogenase 2569045..2569254 Pseudomonas putida HB3267 14288728 YP_007229181.1 CDS B479_11700 NC_019905.1 2569379 2570602 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(2569379..2570602) Pseudomonas putida HB3267 14288729 YP_007229182.1 CDS B479_11705 NC_019905.1 2570612 2571616 R COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(2570612..2571616) Pseudomonas putida HB3267 14288730 YP_007229183.1 CDS B479_11710 NC_019905.1 2571640 2572356 R COG0431 Predicted flavoprotein; arsenical resistance protein ArsH complement(2571640..2572356) Pseudomonas putida HB3267 14288731 YP_007229184.1 CDS B479_11715 NC_019905.1 2572360 2573421 R COG0798 Arsenite efflux pump ACR3 and related permeases; arsenical-resistance protein complement(2572360..2573421) Pseudomonas putida HB3267 14288732 YP_007229185.1 CDS B479_11720 NC_019905.1 2573536 2573892 R COG0640 Predicted transcriptional regulators; ArsR family transcriptional regulator complement(2573536..2573892) Pseudomonas putida HB3267 14288733 YP_007229186.1 CDS B479_11725 NC_019905.1 2574276 2575196 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 2574276..2575196 Pseudomonas putida HB3267 14288734 YP_007229187.1 CDS B479_11730 NC_019905.1 2575345 2576799 D COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; tricarballylate dehydrogenase 2575345..2576799 Pseudomonas putida HB3267 14288735 YP_007229188.1 CDS B479_11735 NC_019905.1 2576780 2577961 D COG1145 Ferredoxin; tricarballylate utilization protein B 2576780..2577961 Pseudomonas putida HB3267 14288736 YP_007229189.1 CDS B479_11740 NC_019905.1 2578022 2578915 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2578022..2578915) Pseudomonas putida HB3267 14288737 YP_007229190.1 CDS B479_11745 NC_019905.1 2579063 2580142 D COG2828 Uncharacterized protein conserved in bacteria; hypothetical protein 2579063..2580142 Pseudomonas putida HB3267 14288738 YP_007229191.1 CDS B479_11750 NC_019905.1 2580216 2581529 D COG1301 Na+/H+-dicarboxylate symporters; sodium:dicarboxylate symporter 2580216..2581529 Pseudomonas putida HB3267 14288739 YP_007229192.1 CDS B479_11755 NC_019905.1 2581653 2582957 D COG2851 H+/citrate symporter; citrate transporter 2581653..2582957 Pseudomonas putida HB3267 14288740 YP_007229193.1 CDS B479_11760 NC_019905.1 2583016 2584269 D outer membrane porin 2583016..2584269 Pseudomonas putida HB3267 14288741 YP_007229194.1 CDS B479_11765 NC_019905.1 2584318 2585217 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; putative permeases of the drug/metabolite transporter superfamily protein complement(2584318..2585217) Pseudomonas putida HB3267 14288742 YP_007229195.1 CDS B479_11770 NC_019905.1 2585242 2586672 R COG2199 FOG: GGDEF domain; diguanylate cyclase complement(2585242..2586672) Pseudomonas putida HB3267 14288743 YP_007229196.1 CDS B479_11775 NC_019905.1 2586914 2588014 R COG0451 Nucleoside-diphosphate-sugar epimerases; hypothetical protein complement(2586914..2588014) Pseudomonas putida HB3267 14288744 YP_007229197.1 CDS B479_11780 NC_019905.1 2588121 2588474 D COG0789 Predicted transcriptional regulators; MerR family transcriptional regulator 2588121..2588474 Pseudomonas putida HB3267 14288745 YP_007229198.1 CDS B479_11785 NC_019905.1 2588568 2589092 D COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; RNA polymerase ECF-subfamily sigma-70 factor 2588568..2589092 Pseudomonas putida HB3267 14288746 YP_007229199.1 CDS B479_11790 NC_019905.1 2589089 2589925 D COG3712 Fe2+-dicitrate sensor, membrane component; putative transmembrane sensor 2589089..2589925 Pseudomonas putida HB3267 14288747 YP_007229200.1 CDS B479_11795 NC_019905.1 2590069 2592441 D COG1629 Outer membrane receptor proteins, mostly Fe transport; hypothetical protein 2590069..2592441 Pseudomonas putida HB3267 14288748 YP_007229201.1 CDS B479_11800 NC_019905.1 2592533 2593039 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; N-acetyltransferase GCN5 2592533..2593039 Pseudomonas putida HB3267 14288749 YP_007229202.1 CDS B479_11805 NC_019905.1 2593317 2595014 D COG0119 Isopropylmalate/homocitrate/citramalate synthases; 2-isopropylmalate synthase 2593317..2595014 Pseudomonas putida HB3267 14288750 YP_007229203.1 CDS B479_11810 NC_019905.1 2595313 2596029 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short chain dehydrogenase/reductase oxidoreductase 2595313..2596029 Pseudomonas putida HB3267 14288751 YP_007229204.1 CDS ftrA NC_019905.1 2596155 2597096 R COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; transcriptional activator FtrA complement(2596155..2597096) Pseudomonas putida HB3267 14288752 YP_007229205.1 CDS B479_11820 NC_019905.1 2597210 2597644 D COG0607 Rhodanese-related sulfurtransferase; rhodanese-like protein 2597210..2597644 Pseudomonas putida HB3267 14288753 YP_007229206.1 CDS B479_11825 NC_019905.1 2597993 2599429 R COG3666 Transposase and inactivated derivatives; hypothetical protein complement(2597993..2599429) Pseudomonas putida HB3267 14288754 YP_007229207.1 CDS B479_11830 NC_019905.1 2599621 2600103 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; acetyltransferase 2599621..2600103 Pseudomonas putida HB3267 14288755 YP_007229208.1 CDS B479_11835 NC_019905.1 2600330 2601241 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2600330..2601241) Pseudomonas putida HB3267 14288756 YP_007229209.1 CDS B479_11840 NC_019905.1 2601335 2602282 D COG1893 Ketopantoate reductase; 2-dehydropantoate 2-reductase 2601335..2602282 Pseudomonas putida HB3267 14288757 YP_007229210.1 CDS B479_11845 NC_019905.1 2602279 2602677 D COG0346 Lactoylglutathione lyase and related lyases; glyoxalase 2602279..2602677 Pseudomonas putida HB3267 14288758 YP_007229211.1 CDS B479_11850 NC_019905.1 2602674 2603129 D COG2030 Acyl dehydratase; dehydratase 2602674..2603129 Pseudomonas putida HB3267 14288759 YP_007229212.1 CDS B479_11855 NC_019905.1 2603126 2604358 D COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F 2603126..2604358 Pseudomonas putida HB3267 14288760 YP_007229213.1 CDS B479_11860 NC_019905.1 2604355 2605173 D COG0169 Shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 2604355..2605173 Pseudomonas putida HB3267 14288761 YP_007229214.1 CDS B479_11865 NC_019905.1 2605227 2605946 R COG3484 Predicted proteasome-type protease; proteasome-type protease complement(2605227..2605946) Pseudomonas putida HB3267 14288762 YP_007229215.1 CDS B479_11870 NC_019905.1 2605988 2606767 R COG1305 Transglutaminase-like enzymes, putative cysteine proteases; transglutaminase complement(2605988..2606767) Pseudomonas putida HB3267 14288763 YP_007229216.1 CDS B479_11875 NC_019905.1 2606764 2607714 R COG2307 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2606764..2607714) Pseudomonas putida HB3267 14288764 YP_007229217.1 CDS B479_11880 NC_019905.1 2607718 2609127 R COG2308 Uncharacterized conserved protein; hypothetical protein complement(2607718..2609127) Pseudomonas putida HB3267 14288765 YP_007229218.1 CDS B479_11885 NC_019905.1 2609554 2610024 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; GNAT family acetyltransferase complement(2609554..2610024) Pseudomonas putida HB3267 14288766 YP_007229219.1 CDS B479_11890 NC_019905.1 2610533 2611798 R COG0477 Permeases of the major facilitator superfamily; major facilitator transporter complement(2610533..2611798) Pseudomonas putida HB3267 14288767 YP_007229220.1 CDS B479_11895 NC_019905.1 2611832 2612902 R sugar phosphate isomerase complement(2611832..2612902) Pseudomonas putida HB3267 14288768 YP_007229221.1 CDS B479_11900 NC_019905.1 2613014 2614501 R COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; MocR family transcriptional regulator complement(2613014..2614501) Pseudomonas putida HB3267 14288769 YP_007229222.1 CDS B479_11905 NC_019905.1 2615416 2615652 D hypothetical protein 2615416..2615652 Pseudomonas putida HB3267 14288770 YP_007229223.1 CDS B479_11910 NC_019905.1 2616199 2618751 D COG2202 FOG: PAS/PAC domain; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2616199..2618751 Pseudomonas putida HB3267 14288771 YP_007229224.1 CDS B479_11915 NC_019905.1 2618774 2619688 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2618774..2619688) Pseudomonas putida HB3267 14288772 YP_007229225.1 CDS B479_11920 NC_019905.1 2619888 2620856 D COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components; putative histidine transporter substrate-binding protein 2619888..2620856 Pseudomonas putida HB3267 14288773 YP_007229226.1 CDS B479_11925 NC_019905.1 2620932 2621783 D COG4176 ABC-type proline/glycine betaine transport system, permease component; glycine betaine ABC transporter permease 2620932..2621783 Pseudomonas putida HB3267 14288774 YP_007229227.1 CDS B479_11930 NC_019905.1 2621780 2622613 D COG4175 ABC-type proline/glycine betaine transport system, ATPase component; glycine betaine ABC transporter ATP-binding protein 2621780..2622613 Pseudomonas putida HB3267 14288775 YP_007229228.1 CDS B479_11935 NC_019905.1 2622626 2624149 D COG2986 Histidine ammonia-lyase; histidine ammonia-lyase 2622626..2624149 Pseudomonas putida HB3267 14288776 YP_007229229.1 CDS B479_11940 NC_019905.1 2624562 2625887 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short chain dehydrogenase complement(2624562..2625887) Pseudomonas putida HB3267 14288777 YP_007229230.1 CDS B479_11945 NC_019905.1 2626249 2627877 D COG0668 Small-conductance mechanosensitive channel; mechanosensitive ion channel protein MscS 2626249..2627877 Pseudomonas putida HB3267 14288778 YP_007229231.1 CDS B479_11950 NC_019905.1 2628070 2629128 R COG3174 Predicted membrane protein; hypothetical protein complement(2628070..2629128) Pseudomonas putida HB3267 14288779 YP_007229232.1 CDS B479_11955 NC_019905.1 2629113 2629934 R COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; CRP/FNR family transcriptional regulator complement(2629113..2629934) Pseudomonas putida HB3267 14288780 YP_007229233.1 CDS B479_11960 NC_019905.1 2629937 2630203 R hypothetical protein complement(2629937..2630203) Pseudomonas putida HB3267 14288781 YP_007229234.1 CDS B479_11965 NC_019905.1 2630558 2631484 D COG0589 Universal stress protein UspA and related nucleotide-binding proteins; UspA domain-containing protein 2630558..2631484 Pseudomonas putida HB3267 14288782 YP_007229235.1 CDS B479_11970 NC_019905.1 2631512 2632060 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; acetyltransferase complement(2631512..2632060) Pseudomonas putida HB3267 14288783 YP_007229236.1 CDS B479_11975 NC_019905.1 2632247 2633161 D COG0589 Universal stress protein UspA and related nucleotide-binding proteins; UspA domain-containing protein 2632247..2633161 Pseudomonas putida HB3267 14288784 YP_007229237.1 CDS B479_11980 NC_019905.1 2633164 2634531 D COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing; metallo-beta-lactamase 2633164..2634531 Pseudomonas putida HB3267 14288785 YP_007229238.1 CDS B479_11985 NC_019905.1 2634620 2635195 D COG0448 ADP-glucose pyrophosphorylase; hypothetical protein 2634620..2635195 Pseudomonas putida HB3267 14288786 YP_007229239.1 CDS B479_11990 NC_019905.1 2635381 2635950 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; Acetyltransferase complement(2635381..2635950) Pseudomonas putida HB3267 14288787 YP_007229240.1 CDS B479_11995 NC_019905.1 2636008 2636466 R hypothetical protein complement(2636008..2636466) Pseudomonas putida HB3267 14288788 YP_007229241.1 CDS B479_12000 NC_019905.1 2636617 2637432 D COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; Crp/Fnr family transcriptional regulator 2636617..2637432 Pseudomonas putida HB3267 14288789 YP_007229242.1 CDS B479_12005 NC_019905.1 2637407 2638132 R COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; hypothetical protein complement(2637407..2638132) Pseudomonas putida HB3267 14288790 YP_007229243.1 CDS B479_12010 NC_019905.1 2638327 2638881 D COG0071 Molecular chaperone (small heat shock protein); heat shock protein Hsp20 2638327..2638881 Pseudomonas putida HB3267 14288791 YP_007229244.1 CDS B479_12015 NC_019905.1 2639022 2639447 R COG1226 Kef-type K+ transport systems, predicted NAD-binding component; hypothetical protein complement(2639022..2639447) Pseudomonas putida HB3267 14288792 YP_007229245.1 CDS B479_12020 NC_019905.1 2639475 2639618 R ATP-dependent metalloprotease FtsH complement(2639475..2639618) Pseudomonas putida HB3267 14288793 YP_007229246.1 CDS B479_12025 NC_019905.1 2639645 2639959 R COG1914 Mn2+ and Fe2+ transporters of the NRAMP family; Mn2+/Fe2+ transporter complement(2639645..2639959) Pseudomonas putida HB3267 14288794 YP_007229247.1 CDS B479_12030 NC_019905.1 2640250 2640819 D COG0236 Acyl carrier protein; Acyl carrier protein, putative 2640250..2640819 Pseudomonas putida HB3267 14288795 YP_007229248.1 CDS B479_12035 NC_019905.1 2640831 2642105 D COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-ACP synthase 2640831..2642105 Pseudomonas putida HB3267 14288796 YP_007229249.1 CDS B479_12040 NC_019905.1 2642263 2643189 D hypothetical protein 2642263..2643189 Pseudomonas putida HB3267 14288797 YP_007229250.1 CDS B479_12045 NC_019905.1 2643186 2644484 D COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-ACP synthase 2643186..2644484 Pseudomonas putida HB3267 14288798 YP_007229251.1 CDS B479_12050 NC_019905.1 2644481 2645686 D COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; beta-ketoacyl synthase-like protein 2644481..2645686 Pseudomonas putida HB3267 14288799 YP_007229252.1 CDS B479_12055 NC_019905.1 2645730 2648600 D COG4992 Ornithine/acetylornithine aminotransferase; Pyridoxalphosphate dependent aminotransferase, class III 2645730..2648600 Pseudomonas putida HB3267 14288800 YP_007229253.1 CDS B479_12060 NC_019905.1 2648610 2649347 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain dehydrogenase 2648610..2649347 Pseudomonas putida HB3267 14288801 YP_007229254.1 CDS B479_12065 NC_019905.1 2649344 2650108 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain dehydrogenase 2649344..2650108 Pseudomonas putida HB3267 14288802 YP_007229255.1 CDS B479_12080 NC_019905.1 2651445 2652281 D COG2834 Outer membrane lipoprotein-sorting protein; putative sigma E regulatory protein, MucB/RseB 2651445..2652281 Pseudomonas putida HB3267 14288803 YP_007229256.1 CDS B479_12085 NC_019905.1 2652315 2654924 D COG1033 Predicted exporters of the RND superfamily; RND efflux transporter 2652315..2654924 Pseudomonas putida HB3267 14288804 YP_007229257.1 CDS B479_12090 NC_019905.1 2654994 2655377 R COG0789 Predicted transcriptional regulators; MerR family transcriptional regulator complement(2654994..2655377) Pseudomonas putida HB3267 14288805 YP_007229258.1 CDS B479_12095 NC_019905.1 2655542 2656120 R COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); oxidoreductase complement(2655542..2656120) Pseudomonas putida HB3267 14288806 YP_007229259.1 CDS B479_12100 NC_019905.1 2656485 2657399 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2656485..2657399) Pseudomonas putida HB3267 14288807 YP_007229260.1 CDS B479_12105 NC_019905.1 2657606 2658628 D COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases; alcohol dehydrogenase 2657606..2658628 Pseudomonas putida HB3267 14288808 YP_007229261.1 CDS B479_12110 NC_019905.1 2659165 2660526 D hypothetical protein 2659165..2660526 Pseudomonas putida HB3267 14288809 YP_007229262.1 CDS B479_12115 NC_019905.1 2660526 2661881 D COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; GntR family transcriptional regulator 2660526..2661881 Pseudomonas putida HB3267 14288810 YP_007229263.1 CDS B479_12120 NC_019905.1 2662193 2663842 D VRR-NUC domain-containing protein 2662193..2663842 Pseudomonas putida HB3267 14288811 YP_007229264.1 CDS B479_12125 NC_019905.1 2663839 2666100 D COG1199 Rad3-related DNA helicases; DEAD/DEAH box helicase 2663839..2666100 Pseudomonas putida HB3267 14288812 YP_007229265.1 CDS B479_12130 NC_019905.1 2666273 2667454 R COG3213 Uncharacterized protein involved in response to NO; NnrS family protein complement(2666273..2667454) Pseudomonas putida HB3267 14288813 YP_007229266.1 CDS B479_12135 NC_019905.1 2667669 2668583 D COG0582 Integrase; integrase family protein 2667669..2668583 Pseudomonas putida HB3267 14288814 YP_007229267.1 CDS B479_12140 NC_019905.1 2669139 2669972 D COG0829 Urease accessory protein UreH; urease accessory protein UreD 2669139..2669972 Pseudomonas putida HB3267 14288815 YP_007229268.1 CDS ureA NC_019905.1 2669982 2670284 D COG0831 Urea amidohydrolase (urease) gamma subunit; urease subunit gamma 2669982..2670284 Pseudomonas putida HB3267 14288816 YP_007229269.1 CDS ureB NC_019905.1 2670304 2670621 D COG0832 Urea amidohydrolase (urease) beta subunit; urease subunit beta 2670304..2670621 Pseudomonas putida HB3267 14288817 YP_007229270.1 CDS ureC NC_019905.1 2670618 2672321 D COG0804 Urea amidohydrolase (urease) alpha subunit; urease subunit alpha 2670618..2672321 Pseudomonas putida HB3267 14288818 YP_007229271.1 CDS ureE NC_019905.1 2672332 2672835 D COG2371 Urease accessory protein UreE; urease accessory protein UreE 2672332..2672835 Pseudomonas putida HB3267 14288819 YP_007229272.1 CDS B479_12165 NC_019905.1 2672853 2673398 D COG2370 Hydrogenase/urease accessory protein; HupE/UreJ protein 2672853..2673398 Pseudomonas putida HB3267 14288820 YP_007229273.1 CDS B479_12170 NC_019905.1 2673398 2674072 D COG0830 Urease accessory protein UreF; urease accessory protein UreF 2673398..2674072 Pseudomonas putida HB3267 14288821 YP_007229274.1 CDS B479_12175 NC_019905.1 2674084 2674707 D COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; urease accessory protein UreG 2674084..2674707 Pseudomonas putida HB3267 14288822 YP_007229275.1 CDS B479_12180 NC_019905.1 2674892 2675620 R COG4312 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2674892..2675620) Pseudomonas putida HB3267 14288823 YP_007229276.1 CDS B479_12185 NC_019905.1 2675714 2677915 R COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; sulfatase complement(2675714..2677915) Pseudomonas putida HB3267 14288824 YP_007229277.1 CDS B479_12190 NC_019905.1 2678051 2679331 R hypothetical protein complement(2678051..2679331) Pseudomonas putida HB3267 14288825 YP_007229278.1 CDS B479_12195 NC_019905.1 2679378 2680130 R hypothetical protein complement(2679378..2680130) Pseudomonas putida HB3267 14288826 YP_007229279.1 CDS B479_12200 NC_019905.1 2680177 2680857 R COG3271 Predicted double-glycine peptidase; peptidase C39, bacteriocin processing complement(2680177..2680857) Pseudomonas putida HB3267 14288827 YP_007229280.1 CDS B479_12205 NC_019905.1 2680920 2682218 R hypothetical protein complement(2680920..2682218) Pseudomonas putida HB3267 14288828 YP_007229281.1 CDS B479_12210 NC_019905.1 2682420 2682998 R hypothetical protein complement(2682420..2682998) Pseudomonas putida HB3267 14288829 YP_007229282.1 CDS B479_12215 NC_019905.1 2683000 2683434 R hypothetical protein complement(2683000..2683434) Pseudomonas putida HB3267 14288830 YP_007229283.1 CDS B479_12220 NC_019905.1 2683733 2684284 R COG3172 Predicted ATPase/kinase involved in NAD metabolism; hypothetical protein complement(2683733..2684284) Pseudomonas putida HB3267 14288831 YP_007229284.1 CDS B479_12225 NC_019905.1 2684299 2684865 R COG3201 Nicotinamide mononucleotide transporter; nicotinamide mononucleotide transporter PnuC complement(2684299..2684865) Pseudomonas putida HB3267 14288832 YP_007229285.1 CDS B479_12230 NC_019905.1 2685051 2686685 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(2685051..2686685) Pseudomonas putida HB3267 14288833 YP_007229286.1 CDS B479_12235 NC_019905.1 2686985 2687815 D COG1968 Uncharacterized bacitracin resistance protein; undecaprenyl pyrophosphate phosphatase 2686985..2687815 Pseudomonas putida HB3267 14288834 YP_007229287.1 CDS B479_12240 NC_019905.1 2687853 2688221 D COG3326 Predicted membrane protein; hypothetical protein 2687853..2688221 Pseudomonas putida HB3267 14288835 YP_007229288.1 CDS B479_12245 NC_019905.1 2688342 2688686 R COG2315 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2688342..2688686) Pseudomonas putida HB3267 14288836 YP_007229289.1 CDS B479_12250 NC_019905.1 2688694 2689596 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2688694..2689596) Pseudomonas putida HB3267 14288837 YP_007229290.1 CDS B479_12255 NC_019905.1 2689730 2690341 D COG1182 Acyl carrier protein phosphodiesterase; azoreductase 2689730..2690341 Pseudomonas putida HB3267 14288838 YP_007229291.1 CDS B479_12260 NC_019905.1 2690379 2691581 R COG1252 NADH dehydrogenase, FAD-containing subunit; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2690379..2691581) Pseudomonas putida HB3267 14288839 YP_007229292.1 CDS B479_12265 NC_019905.1 2691651 2692250 R COG1396 Predicted transcriptional regulators; XRE family transcriptional regulator complement(2691651..2692250) Pseudomonas putida HB3267 14288840 YP_007229293.1 CDS B479_12270 NC_019905.1 2692290 2694242 R COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; NADH:flavin oxidoreductase complement(2692290..2694242) Pseudomonas putida HB3267 14288841 YP_007229294.1 CDS B479_12275 NC_019905.1 2694419 2695462 D COG0687 Spermidine/putrescine-binding periplasmic protein; extracellular solute-binding protein 2694419..2695462 Pseudomonas putida HB3267 14288842 YP_007229295.1 CDS B479_12280 NC_019905.1 2695486 2696241 D COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; aldolase II superfamily protein 2695486..2696241 Pseudomonas putida HB3267 14288843 YP_007229296.1 CDS B479_12285 NC_019905.1 2696382 2697266 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein 2696382..2697266 Pseudomonas putida HB3267 14288844 YP_007229297.1 CDS B479_12290 NC_019905.1 2697381 2697701 D COG0393 Uncharacterized conserved protein; hypothetical protein 2697381..2697701 Pseudomonas putida HB3267 14288845 YP_007229298.1 CDS B479_12295 NC_019905.1 2697840 2698028 D hypothetical protein 2697840..2698028 Pseudomonas putida HB3267 14288846 YP_007229299.1 CDS B479_12300 NC_019905.1 2698175 2698480 D hypothetical protein 2698175..2698480 Pseudomonas putida HB3267 14288847 YP_007229300.1 CDS B479_12305 NC_019905.1 2698527 2698859 R hypothetical protein complement(2698527..2698859) Pseudomonas putida HB3267 14288848 YP_007229301.1 CDS ampC NC_019905.1 2699161 2700303 R COG1680 Beta-lactamase class C and other penicillin binding proteins; beta-lactamase/D-alanine carboxypeptidase complement(2699161..2700303) Pseudomonas putida HB3267 14288849 YP_007229302.1 CDS B479_12315 NC_019905.1 2700423 2701415 D COG0385 Predicted Na+-dependent transporter; bile acid:sodium symporter 2700423..2701415 Pseudomonas putida HB3267 14288850 YP_007229303.1 CDS B479_12320 NC_019905.1 2701586 2702161 R COG1132 ABC-type multidrug transport system, ATPase and permease components; hypothetical protein complement(2701586..2702161) Pseudomonas putida HB3267 14288851 YP_007229304.1 CDS B479_12325 NC_019905.1 2702166 2702729 R COG1309 Transcriptional regulator; TetR family transcriptional regulator complement(2702166..2702729) Pseudomonas putida HB3267 14288852 YP_007229305.1 CDS B479_12330 NC_019905.1 2702819 2703550 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain dehydrogenase 2702819..2703550 Pseudomonas putida HB3267 14288853 YP_007229306.1 CDS B479_12335 NC_019905.1 2703582 2704193 D COG3917 2-hydroxychromene-2-carboxylate isomerase; DSBA oxidoreductase 2703582..2704193 Pseudomonas putida HB3267 14288854 YP_007229307.1 CDS B479_12340 NC_019905.1 2704288 2704833 R COG1396 Predicted transcriptional regulators; XRE family transcriptional regulator complement(2704288..2704833) Pseudomonas putida HB3267 14288855 YP_007229308.1 CDS B479_12345 NC_019905.1 2704915 2706120 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(2704915..2706120) Pseudomonas putida HB3267 14288856 YP_007229309.1 CDS B479_12350 NC_019905.1 2706205 2706738 R COG3038 Cytochrome B561; cytochrome B561 complement(2706205..2706738) Pseudomonas putida HB3267 14288857 YP_007229310.1 CDS B479_12355 NC_019905.1 2706735 2707787 R COG0753 Catalase; catalase domain-containing protein complement(2706735..2707787) Pseudomonas putida HB3267 14288858 YP_007229311.1 CDS B479_12360 NC_019905.1 2707912 2708433 D COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; ECF subfamily RNA polymerase sigma-24 factor 2707912..2708433 Pseudomonas putida HB3267 14288859 YP_007229312.1 CDS B479_12365 NC_019905.1 2708430 2709182 D COG5662 Predicted transmembrane transcriptional regulator (anti-sigma factor); putative transmembrane anti-sigma factor 2708430..2709182 Pseudomonas putida HB3267 14288860 YP_007229313.1 CDS B479_12370 NC_019905.1 2709491 2710498 R COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; AraC family transcriptional regulator complement(2709491..2710498) Pseudomonas putida HB3267 14288861 YP_007229314.1 CDS B479_12375 NC_019905.1 2710659 2711129 D hypothetical protein 2710659..2711129 Pseudomonas putida HB3267 14288862 YP_007229315.1 CDS B479_12380 NC_019905.1 2711354 2711566 D COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; hypothetical protein 2711354..2711566 Pseudomonas putida HB3267 14288863 YP_007229316.1 CDS B479_12385 NC_019905.1 2711611 2711934 R hypothetical protein complement(2711611..2711934) Pseudomonas putida HB3267 14288864 YP_007229317.1 CDS B479_12390 NC_019905.1 2712145 2712555 D COG0251 Putative translation initiation inhibitor, yjgF family; endoribonuclease L-PSP 2712145..2712555 Pseudomonas putida HB3267 14288865 YP_007229318.1 CDS B479_12395 NC_019905.1 2712664 2713536 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein 2712664..2713536 Pseudomonas putida HB3267 14288866 YP_007229319.1 CDS B479_12400 NC_019905.1 2713533 2714252 R hypothetical protein complement(2713533..2714252) Pseudomonas putida HB3267 14288867 YP_007229320.1 CDS B479_12405 NC_019905.1 2714334 2714585 R hypothetical protein complement(2714334..2714585) Pseudomonas putida HB3267 14288868 YP_007229321.1 CDS B479_12410 NC_019905.1 2714708 2715367 D hypothetical protein 2714708..2715367 Pseudomonas putida HB3267 14288869 YP_007229322.1 CDS B479_12415 NC_019905.1 2715557 2717014 D hypothetical protein 2715557..2717014 Pseudomonas putida HB3267 14288870 YP_007229323.1 CDS B479_12420 NC_019905.1 2717011 2717904 D hypothetical protein 2717011..2717904 Pseudomonas putida HB3267 14288871 YP_007229324.1 CDS B479_12425 NC_019905.1 2718142 2719182 D COG3209 Rhs family protein; hypothetical protein 2718142..2719182 Pseudomonas putida HB3267 14288872 YP_007229325.1 CDS B479_12430 NC_019905.1 2719318 2719503 D hypothetical protein 2719318..2719503 Pseudomonas putida HB3267 14288873 YP_007229326.1 CDS B479_12435 NC_019905.1 2719663 2720526 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2719663..2720526) Pseudomonas putida HB3267 14288874 YP_007229327.1 CDS B479_12440 NC_019905.1 2720619 2721047 D COG4125 Predicted membrane protein; transmembrane pair domain-containing protein 2720619..2721047 Pseudomonas putida HB3267 14288875 YP_007229328.1 CDS B479_12445 NC_019905.1 2721278 2722297 R COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; branched-chain amino acid aminotransferase complement(2721278..2722297) Pseudomonas putida HB3267 14288876 YP_007229329.1 CDS B479_12450 NC_019905.1 2722696 2723763 D COG0523 Putative GTPases (G3E family); cobalamin biosynthesis protein CobW 2722696..2723763 Pseudomonas putida HB3267 14288877 YP_007229330.1 CDS cobN NC_019905.1 2723767 2727528 D COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases; cobaltochelatase subunit CobN 2723767..2727528 Pseudomonas putida HB3267 14288878 YP_007229331.1 CDS B479_12460 NC_019905.1 2727530 2728552 D COG1239 Mg-chelatase subunit ChlI; magnesium chelatase 2727530..2728552 Pseudomonas putida HB3267 14288879 YP_007229332.1 CDS B479_12465 NC_019905.1 2728654 2729220 D COG1240 Mg-chelatase subunit ChlD; magnesium chelatase subunit ChlD 2728654..2729220 Pseudomonas putida HB3267 14288880 YP_007229333.1 CDS B479_12470 NC_019905.1 2729329 2729595 R hypothetical protein complement(2729329..2729595) Pseudomonas putida HB3267 14288881 YP_007229334.1 CDS B479_12475 NC_019905.1 2729938 2731263 D COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; sigma-54 dependent transcription regulator 2729938..2731263 Pseudomonas putida HB3267 14288882 YP_007229335.1 CDS B479_12480 NC_019905.1 2731388 2732230 R COG0625 Glutathione S-transferase; S-transferase complement(2731388..2732230) Pseudomonas putida HB3267 14288883 YP_007229336.1 CDS B479_12485 NC_019905.1 2732431 2733477 D COG4188 Predicted dienelactone hydrolase; hypothetical protein 2732431..2733477 Pseudomonas putida HB3267 14288884 YP_007229337.1 CDS B479_12490 NC_019905.1 2733439 2734632 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(2733439..2734632) Pseudomonas putida HB3267 14288885 YP_007229338.1 CDS B479_12495 NC_019905.1 2734817 2736403 R COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein complement(2734817..2736403) Pseudomonas putida HB3267 14288886 YP_007229339.1 CDS B479_12500 NC_019905.1 2736424 2736588 R hypothetical protein complement(2736424..2736588) Pseudomonas putida HB3267 14288887 YP_007229340.1 CDS B479_12505 NC_019905.1 2736879 2737340 D hypothetical protein 2736879..2737340 Pseudomonas putida HB3267 14288888 YP_007229341.1 CDS B479_12510 NC_019905.1 2737472 2738137 R COG2135 Uncharacterized conserved protein; hypothetical protein complement(2737472..2738137) Pseudomonas putida HB3267 14288889 YP_007229342.1 CDS B479_12515 NC_019905.1 2738268 2739635 R COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; response regulator receiver domain-containing protein complement(2738268..2739635) Pseudomonas putida HB3267 14288890 YP_007229343.1 CDS B479_12520 NC_019905.1 2739807 2740733 D COG1858 Cytochrome c peroxidase; cytochrome c551 peroxidase 2739807..2740733 Pseudomonas putida HB3267 14288891 YP_007229344.1 CDS B479_12525 NC_019905.1 2740730 2742541 D COG0642 Signal transduction histidine kinase; sensor histidine kinase/response regulator 2740730..2742541 Pseudomonas putida HB3267 14288892 YP_007229345.1 CDS B479_12530 NC_019905.1 2742609 2742707 D hypothetical protein 2742609..2742707 Pseudomonas putida HB3267 14288893 YP_007229346.1 CDS B479_12535 NC_019905.1 2743419 2743751 D hypothetical protein 2743419..2743751 Pseudomonas putida HB3267 14288894 YP_007229347.1 CDS B479_12540 NC_019905.1 2743881 2744192 D hypothetical protein 2743881..2744192 Pseudomonas putida HB3267 14288895 YP_007229348.1 CDS B479_12545 NC_019905.1 2744706 2751482 D COG2931 RTX toxins and related Ca2+-binding proteins; hypothetical protein 2744706..2751482 Pseudomonas putida HB3267 14288896 YP_007229349.1 CDS B479_12550 NC_019905.1 2751482 2752753 D COG1538 Outer membrane protein; hypothetical protein 2751482..2752753 Pseudomonas putida HB3267 14288897 YP_007229350.1 CDS B479_12555 NC_019905.1 2752743 2754317 D COG1301 Na+/H+-dicarboxylate symporters; sodium:dicarboxylate symporter 2752743..2754317 Pseudomonas putida HB3267 14288898 YP_007229351.1 CDS B479_12560 NC_019905.1 2754576 2754998 D hypothetical protein 2754576..2754998 Pseudomonas putida HB3267 14288899 YP_007229352.1 CDS B479_12565 NC_019905.1 2755413 2755742 D hypothetical protein 2755413..2755742 Pseudomonas putida HB3267 14288900 YP_007229353.1 CDS B479_12570 NC_019905.1 2755744 2756100 R DNA-binding transcriptional activator OsmE complement(2755744..2756100) Pseudomonas putida HB3267 14288901 YP_007229354.1 CDS B479_12575 NC_019905.1 2756181 2757416 R COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; NADH:flavin oxidoreductase complement(2756181..2757416) Pseudomonas putida HB3267 14288902 YP_007229355.1 CDS B479_12580 NC_019905.1 2757528 2757947 D COG0789 Predicted transcriptional regulators; MerR family transcriptional regulator 2757528..2757947 Pseudomonas putida HB3267 14288903 YP_007229356.1 CDS B479_12585 NC_019905.1 2758114 2758320 R hypothetical protein complement(2758114..2758320) Pseudomonas putida HB3267 14288904 YP_007229357.1 CDS B479_12590 NC_019905.1 2758550 2759530 D COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases; alcohol dehydrogenase 2758550..2759530 Pseudomonas putida HB3267 14288905 YP_007229358.1 CDS B479_12595 NC_019905.1 2759544 2760392 D COG2175 Probable taurine catabolism dioxygenase; taurine dioxygenase 2759544..2760392 Pseudomonas putida HB3267 14288906 YP_007229359.1 CDS B479_12600 NC_019905.1 2760447 2761496 D COG3246 Uncharacterized conserved protein; hypothetical protein 2760447..2761496 Pseudomonas putida HB3267 14288907 YP_007229360.1 CDS B479_12605 NC_019905.1 2761691 2763004 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 2761691..2763004 Pseudomonas putida HB3267 14288908 YP_007229361.1 CDS B479_12610 NC_019905.1 2763001 2763654 D COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis; DSBA oxidoreductase 2763001..2763654 Pseudomonas putida HB3267 14288909 YP_007229362.1 CDS B479_12615 NC_019905.1 2763651 2763977 D COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases; Rieske (2Fe-2S) domain-containing protein 2763651..2763977 Pseudomonas putida HB3267 14288910 YP_007229363.1 CDS B479_12620 NC_019905.1 2763974 2764984 D COG2855 Predicted membrane protein; membrane protein 2763974..2764984 Pseudomonas putida HB3267 14288911 YP_007229364.1 CDS B479_12625 NC_019905.1 2765137 2766195 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(2765137..2766195) Pseudomonas putida HB3267 14288912 YP_007229365.1 CDS B479_12630 NC_019905.1 2766503 2767081 D COG3545 Predicted esterase of the alpha/beta hydrolase fold; hypothetical protein 2766503..2767081 Pseudomonas putida HB3267 14288913 YP_007229366.1 CDS B479_12635 NC_019905.1 2767156 2769111 D hypothetical protein 2767156..2769111 Pseudomonas putida HB3267 14288914 YP_007229367.1 CDS B479_12640 NC_019905.1 2769150 2770508 D hypothetical protein 2769150..2770508 Pseudomonas putida HB3267 14288915 YP_007229368.1 CDS B479_12645 NC_019905.1 2770530 2771525 D COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor; glycosyl hydrolase 2770530..2771525 Pseudomonas putida HB3267 14288916 YP_007229369.1 CDS B479_12650 NC_019905.1 2771541 2774006 D COG1033 Predicted exporters of the RND superfamily; putative transporter 2771541..2774006 Pseudomonas putida HB3267 14288917 YP_007229370.1 CDS B479_12655 NC_019905.1 2773999 2775777 D COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase domain-containing protein 2773999..2775777 Pseudomonas putida HB3267 14288918 YP_007229371.1 CDS B479_12660 NC_019905.1 2775774 2777429 D COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; long-chain-fatty-acid--CoA ligase 2775774..2777429 Pseudomonas putida HB3267 14288919 YP_007229372.1 CDS B479_12665 NC_019905.1 2777749 2778249 D COG0350 Methylated DNA-protein cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 2777749..2778249 Pseudomonas putida HB3267 14288920 YP_007229373.1 CDS B479_12670 NC_019905.1 2778254 2778496 R hypothetical protein complement(2778254..2778496) Pseudomonas putida HB3267 14288921 YP_007229374.1 CDS B479_12675 NC_019905.1 2778493 2779236 R COG0388 Predicted amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(2778493..2779236) Pseudomonas putida HB3267 14288922 YP_007229375.1 CDS B479_12680 NC_019905.1 2779313 2779828 R hypothetical protein complement(2779313..2779828) Pseudomonas putida HB3267 14288923 YP_007229376.1 CDS B479_12685 NC_019905.1 2779904 2780611 D COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases; metallophosphoesterase 2779904..2780611 Pseudomonas putida HB3267 14288924 YP_007229377.1 CDS B479_12690 NC_019905.1 2780577 2781191 R COG1280 Putative threonine efflux protein; lysine exporter protein LysE/YggA complement(2780577..2781191) Pseudomonas putida HB3267 14288925 YP_007229378.1 CDS B479_12695 NC_019905.1 2781402 2782211 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(2781402..2782211) Pseudomonas putida HB3267 14288926 YP_007229379.1 CDS B479_12700 NC_019905.1 2782343 2782969 D COG1280 Putative threonine efflux protein; lysine exporter protein LysE/YggA 2782343..2782969 Pseudomonas putida HB3267 14288927 YP_007229380.1 CDS B479_12705 NC_019905.1 2782966 2783241 R COG0760 Parvulin-like peptidyl-prolyl isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(2782966..2783241) Pseudomonas putida HB3267 14288928 YP_007229381.1 CDS B479_12710 NC_019905.1 2783450 2785402 R COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; acetoacetyl-CoA synthetase complement(2783450..2785402) Pseudomonas putida HB3267 14288929 YP_007229382.1 CDS B479_12715 NC_019905.1 2785546 2786025 R COG4574 Serine protease inhibitor ecotin; ecotin complement(2785546..2786025) Pseudomonas putida HB3267 14288930 YP_007229383.1 CDS B479_12720 NC_019905.1 2786081 2786851 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 3-hydroxybutyrate dehydrogenase complement(2786081..2786851) Pseudomonas putida HB3267 14288931 YP_007229384.1 CDS B479_12725 NC_019905.1 2786862 2788253 R COG2610 H+/gluconate symporter and related permeases; citrate transporter complement(2786862..2788253) Pseudomonas putida HB3267 14288932 YP_007229385.1 CDS B479_12730 NC_019905.1 2788523 2789905 R COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains; sigma-54 dependent transcription regulator complement(2788523..2789905) Pseudomonas putida HB3267 14288933 YP_007229386.1 CDS B479_12735 NC_019905.1 2789962 2790954 D COG3209 Rhs family protein; hypothetical protein 2789962..2790954 Pseudomonas putida HB3267 14288934 YP_007229387.1 CDS B479_12740 NC_019905.1 2790911 2791927 R COG4239 ABC-type uncharacterized transport system, permease component; binding-protein-dependent transport system inner membrane protein complement(2790911..2791927) Pseudomonas putida HB3267 14288935 YP_007229388.1 CDS B479_12745 NC_019905.1 2791927 2792985 R COG4174 ABC-type uncharacterized transport system, permease component; binding-protein-dependent transport system inner membrane protein complement(2791927..2792985) Pseudomonas putida HB3267 14288936 YP_007229389.1 CDS B479_12750 NC_019905.1 2792982 2794826 R COG4166 ABC-type oligopeptide transport system, periplasmic component; extracellular solute-binding protein complement(2792982..2794826) Pseudomonas putida HB3267 14288937 YP_007229390.1 CDS B479_12755 NC_019905.1 2794922 2795203 R COG0760 Parvulin-like peptidyl-prolyl isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(2794922..2795203) Pseudomonas putida HB3267 14288938 YP_007229391.1 CDS B479_12760 NC_019905.1 2795284 2796339 R COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase complement(2795284..2796339) Pseudomonas putida HB3267 14288939 YP_007229392.1 CDS B479_12765 NC_019905.1 2796895 2797446 R COG1881 Phospholipid-binding protein; PEBP family protein complement(2796895..2797446) Pseudomonas putida HB3267 14288940 YP_007229393.1 CDS B479_12770 NC_019905.1 2797495 2797803 R hypothetical protein complement(2797495..2797803) Pseudomonas putida HB3267 14288941 YP_007229394.1 CDS B479_12775 NC_019905.1 2797950 2798915 R COG2356 Endonuclease I; deoxyribonuclease I complement(2797950..2798915) Pseudomonas putida HB3267 14288942 YP_007229395.1 CDS B479_12780 NC_019905.1 2798930 2799229 R hypothetical protein complement(2798930..2799229) Pseudomonas putida HB3267 14288943 YP_007229396.1 CDS B479_12785 NC_019905.1 2799617 2800750 R COG2814 Arabinose efflux permease; major facilitator superfamily transporter complement(2799617..2800750) Pseudomonas putida HB3267 14288944 YP_007229397.1 CDS B479_12790 NC_019905.1 2800882 2801763 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2800882..2801763) Pseudomonas putida HB3267 14288945 YP_007229398.1 CDS B479_12795 NC_019905.1 2801934 2803577 D COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; acetolactate synthase 2801934..2803577 Pseudomonas putida HB3267 14288946 YP_007229399.1 CDS B479_12800 NC_019905.1 2803838 2805160 R COG0531 Amino acid transporters; amino acid permease family protein complement(2803838..2805160) Pseudomonas putida HB3267 14288947 YP_007229400.1 CDS B479_12805 NC_019905.1 2805260 2806081 R COG0388 Predicted amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(2805260..2806081) Pseudomonas putida HB3267 14288948 YP_007229401.1 CDS B479_12810 NC_019905.1 2806244 2807032 D COG2771 DNA-binding HTH domain-containing proteins; LuxR family transcriptional regulator 2806244..2807032 Pseudomonas putida HB3267 14288949 YP_007229402.1 CDS B479_12815 NC_019905.1 2807124 2807765 D COG0125 Thymidylate kinase; hypothetical protein 2807124..2807765 Pseudomonas putida HB3267 14288950 YP_007229403.1 CDS B479_12820 NC_019905.1 2807784 2808206 R hypothetical protein complement(2807784..2808206) Pseudomonas putida HB3267 14288951 YP_007229404.1 CDS B479_12825 NC_019905.1 2808446 2808883 D COG2391 Predicted transporter component; hypothetical protein 2808446..2808883 Pseudomonas putida HB3267 14288952 YP_007229405.1 CDS B479_12830 NC_019905.1 2808885 2809304 D COG2391 Predicted transporter component; YeeE/YedE family protein 2808885..2809304 Pseudomonas putida HB3267 14288953 YP_007229406.1 CDS B479_12835 NC_019905.1 2809395 2809898 D COG0678 Peroxiredoxin; redoxin domain-containing protein 2809395..2809898 Pseudomonas putida HB3267 14288954 YP_007229407.1 CDS B479_12840 NC_019905.1 2810463 2811329 R COG1752 Predicted esterase of the alpha-beta hydrolase superfamily; patatin complement(2810463..2811329) Pseudomonas putida HB3267 14288955 YP_007229408.1 CDS B479_12845 NC_019905.1 2811570 2811788 D hypothetical protein 2811570..2811788 Pseudomonas putida HB3267 14288956 YP_007229409.1 CDS B479_12850 NC_019905.1 2811807 2812103 D hypothetical protein 2811807..2812103 Pseudomonas putida HB3267 14288957 YP_007229410.1 CDS B479_12855 NC_019905.1 2812103 2812816 D COG1801 Uncharacterized conserved protein; hypothetical protein 2812103..2812816 Pseudomonas putida HB3267 14288958 YP_007229411.1 CDS B479_12860 NC_019905.1 2812929 2813225 D hypothetical protein 2812929..2813225 Pseudomonas putida HB3267 14288959 YP_007229412.1 CDS B479_12865 NC_019905.1 2813333 2813857 D hypothetical protein 2813333..2813857 Pseudomonas putida HB3267 14288960 YP_007229413.1 CDS B479_12870 NC_019905.1 2814156 2814686 D hypothetical protein 2814156..2814686 Pseudomonas putida HB3267 14288961 YP_007229414.1 CDS B479_12875 NC_019905.1 2814686 2815114 D hypothetical protein 2814686..2815114 Pseudomonas putida HB3267 14288962 YP_007229415.1 CDS B479_12880 NC_019905.1 2815111 2815917 D hypothetical protein 2815111..2815917 Pseudomonas putida HB3267 14288963 YP_007229416.1 CDS B479_12885 NC_019905.1 2816001 2816975 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 2816001..2816975 Pseudomonas putida HB3267 14288964 YP_007229417.1 CDS B479_12890 NC_019905.1 2817025 2818032 R COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases; zinc-binding alcohol dehydrogenase family protein complement(2817025..2818032) Pseudomonas putida HB3267 14288965 YP_007229418.1 CDS B479_12895 NC_019905.1 2818205 2818969 R COG3967 Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein); short-chain dehydrogenase/reductase SDR complement(2818205..2818969) Pseudomonas putida HB3267 14288966 YP_007229419.1 CDS B479_12900 NC_019905.1 2818990 2819787 R COG0300 Short-chain dehydrogenases of various substrate specificities; short-chain dehydrogenase/reductase SDR complement(2818990..2819787) Pseudomonas putida HB3267 14288967 YP_007229420.1 CDS B479_12905 NC_019905.1 2819894 2820847 D COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; transcriptional regulator 2819894..2820847 Pseudomonas putida HB3267 14288968 YP_007229421.1 CDS B479_12910 NC_019905.1 2820893 2821180 R COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; MutT/nudix family protein complement(2820893..2821180) Pseudomonas putida HB3267 14288969 YP_007229422.1 CDS B479_12915 NC_019905.1 2821440 2821652 R hypothetical protein complement(2821440..2821652) Pseudomonas putida HB3267 14288970 YP_007229423.1 CDS B479_12920 NC_019905.1 2821865 2823469 R hypothetical protein complement(2821865..2823469) Pseudomonas putida HB3267 14288971 YP_007229424.1 CDS B479_12925 NC_019905.1 2823549 2825285 R hypothetical protein complement(2823549..2825285) Pseudomonas putida HB3267 14288972 YP_007229425.1 CDS B479_12930 NC_019905.1 2825282 2826997 R tyrosinase complement(2825282..2826997) Pseudomonas putida HB3267 14288973 YP_007229426.1 CDS B479_12935 NC_019905.1 2827268 2827747 D COG1522 Transcriptional regulators; AsnC family transcriptional regulator 2827268..2827747 Pseudomonas putida HB3267 14288974 YP_007229427.1 CDS B479_12940 NC_019905.1 2827795 2828247 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(2827795..2828247) Pseudomonas putida HB3267 14288975 YP_007229428.1 CDS B479_12945 NC_019905.1 2828421 2829107 R COG1335 Amidases related to nicotinamidase; isochorismatase superfamily hydrolase complement(2828421..2829107) Pseudomonas putida HB3267 14288976 YP_007229429.1 CDS B479_12950 NC_019905.1 2829371 2829832 D COG0251 Putative translation initiation inhibitor, yjgF family; endoribonuclease L-PSP 2829371..2829832 Pseudomonas putida HB3267 14288977 YP_007229430.1 CDS B479_12955 NC_019905.1 2829853 2830767 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2829853..2830767) Pseudomonas putida HB3267 14288978 YP_007229431.1 CDS B479_12960 NC_019905.1 2830996 2831418 D lipoprotein 2830996..2831418 Pseudomonas putida HB3267 14288979 YP_007229432.1 CDS B479_12965 NC_019905.1 2831496 2831909 D COG1186 Protein chain release factor B; hypothetical protein 2831496..2831909 Pseudomonas putida HB3267 14288980 YP_007229433.1 CDS B479_12970 NC_019905.1 2832358 2833503 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily MFS_1 complement(2832358..2833503) Pseudomonas putida HB3267 14288981 YP_007229434.1 CDS B479_12975 NC_019905.1 2834221 2835057 R COG1414 Transcriptional regulator; IclR family transcriptional regulator complement(2834221..2835057) Pseudomonas putida HB3267 14288982 YP_007229435.1 CDS B479_12980 NC_019905.1 2835140 2836081 D COG1024 Enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase 2835140..2836081 Pseudomonas putida HB3267 14288983 YP_007229436.1 CDS B479_12985 NC_019905.1 2836108 2838021 D COG1042 Acyl-CoA synthetase (NDP forming); CoA-binding domain-containing protein 2836108..2838021 Pseudomonas putida HB3267 14288984 YP_007229437.1 CDS B479_12990 NC_019905.1 2838239 2839066 D COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; taurine-transporting AtPase 2838239..2839066 Pseudomonas putida HB3267 14288985 YP_007229438.1 CDS B479_12995 NC_019905.1 2839093 2839860 D COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; binding-protein-dependent transport system inner membrane protein 2839093..2839860 Pseudomonas putida HB3267 14288986 YP_007229439.1 CDS B479_13000 NC_019905.1 2839942 2840895 D COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components; hypothetical protein 2839942..2840895 Pseudomonas putida HB3267 14288987 YP_007229440.1 CDS B479_13005 NC_019905.1 2840976 2842229 D porin 2840976..2842229 Pseudomonas putida HB3267 14288988 YP_007229441.1 CDS B479_13010 NC_019905.1 2842257 2844341 D COG1024 Enoyl-CoA hydratase/carnithine racemase; 3-hydroxybutyryl-CoA epimerase 2842257..2844341 Pseudomonas putida HB3267 14288989 YP_007229442.1 CDS B479_13015 NC_019905.1 2844352 2844918 R COG3180 Putative ammonia monooxygenase; abrB protein complement(2844352..2844918) Pseudomonas putida HB3267 14288990 YP_007229443.1 CDS B479_13020 NC_019905.1 2845562 2846464 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 2845562..2846464 Pseudomonas putida HB3267 14288991 YP_007229444.1 CDS B479_13025 NC_019905.1 2846568 2847785 D COG0183 Acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase 2846568..2847785 Pseudomonas putida HB3267 14288992 YP_007229445.1 CDS B479_13030 NC_019905.1 2847859 2848785 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2847859..2848785) Pseudomonas putida HB3267 14288993 YP_007229446.1 CDS B479_13035 NC_019905.1 2848938 2849861 D COG0388 Predicted amidohydrolase; putative amidohydrolase 2848938..2849861 Pseudomonas putida HB3267 14288994 YP_007229447.1 CDS B479_13040 NC_019905.1 2850003 2850896 R COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); hypothetical protein complement(2850003..2850896) Pseudomonas putida HB3267 14288995 YP_007229448.1 CDS B479_13045 NC_019905.1 2850893 2851705 R COG0725 ABC-type molybdate transport system, periplasmic component; extracellular solute-binding protein complement(2850893..2851705) Pseudomonas putida HB3267 14288996 YP_007229449.1 CDS B479_13050 NC_019905.1 2851731 2852546 R COG3386 Gluconolactonase; gluconolactonase complement(2851731..2852546) Pseudomonas putida HB3267 14288997 YP_007229450.1 CDS B479_13055 NC_019905.1 2852703 2853095 R COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold; dicarboxylic acid hydrolase complement(2852703..2853095) Pseudomonas putida HB3267 14288998 YP_007229451.1 CDS B479_13060 NC_019905.1 2853708 2854526 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain dehydrogenase complement(2853708..2854526) Pseudomonas putida HB3267 14288999 YP_007229452.1 CDS B479_13065 NC_019905.1 2854537 2855097 R COG2128 Uncharacterized conserved protein; carboxymuconolactone decarboxylase complement(2854537..2855097) Pseudomonas putida HB3267 14289000 YP_007229453.1 CDS B479_13070 NC_019905.1 2855109 2856461 R COG1301 Na+/H+-dicarboxylate symporters; C4-dicarboxylate transporter complement(2855109..2856461) Pseudomonas putida HB3267 14289001 YP_007229454.1 CDS B479_13075 NC_019905.1 2856628 2857554 D COG0583 Transcriptional regulator; transcriptional regulator 2856628..2857554 Pseudomonas putida HB3267 14289002 YP_007229455.1 CDS B479_13080 NC_019905.1 2857767 2858648 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); hypothetical protein 2857767..2858648 Pseudomonas putida HB3267 14289003 YP_007229456.1 CDS B479_13085 NC_019905.1 2858746 2858934 D COG0066 3-isopropylmalate dehydratase small subunit; 3-isopropylmalate dehydratase small subunit 2858746..2858934 Pseudomonas putida HB3267 14289004 YP_007229457.1 CDS B479_13090 NC_019905.1 2861128 2862051 R COG3327 Phenylacetic acid-responsive transcriptional repressor; PaaX family transcriptional regulator complement(2861128..2862051) Pseudomonas putida HB3267 14289005 YP_007229458.1 CDS B479_13095 NC_019905.1 2862129 2862728 R COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily; phenylacetic acid degradation protein PaaY complement(2862129..2862728) Pseudomonas putida HB3267 14289006 YP_007229459.1 CDS B479_13100 NC_019905.1 2863084 2863857 D COG1024 Enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase-isomerase 2863084..2863857 Pseudomonas putida HB3267 14289007 YP_007229460.1 CDS B479_13105 NC_019905.1 2863892 2864683 D COG1024 Enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase 2863892..2864683 Pseudomonas putida HB3267 14289008 YP_007229461.1 CDS B479_13110 NC_019905.1 2864686 2866203 D COG1250 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxy-acyl-CoA dehydrogenase 2864686..2866203 Pseudomonas putida HB3267 14289009 YP_007229462.1 CDS B479_13115 NC_019905.1 2866196 2866636 D COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; phenylacetic acid degradation protein PaaD 2866196..2866636 Pseudomonas putida HB3267 14289010 YP_007229463.1 CDS B479_13120 NC_019905.1 2866629 2867849 D COG0183 Acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase 2866629..2867849 Pseudomonas putida HB3267 14289011 YP_007229464.1 CDS B479_13125 NC_019905.1 2867971 2869290 D COG1541 Coenzyme F390 synthetase; phenylacetate-CoA ligase 2867971..2869290 Pseudomonas putida HB3267 14289012 YP_007229465.1 CDS paaA NC_019905.1 2869583 2870572 D COG3396 Uncharacterized conserved protein; phenylacetate-CoA oxygenase subunit PaaA 2869583..2870572 Pseudomonas putida HB3267 14289013 YP_007229466.1 CDS paaB NC_019905.1 2870597 2870878 D COG3460 Uncharacterized enzyme of phenylacetate metabolism; phenylacetate-CoA oxygenase subunit PaaB 2870597..2870878 Pseudomonas putida HB3267 14289014 YP_007229467.1 CDS B479_13140 NC_019905.1 2870887 2871645 D COG3396 Uncharacterized conserved protein; phenylacetate-CoA oxygenase subunit PaaI 2870887..2871645 Pseudomonas putida HB3267 14289015 YP_007229468.1 CDS B479_13145 NC_019905.1 2871632 2872165 D COG2151 Predicted metal-sulfur cluster biosynthetic enzyme; phenylacetate-CoA oxygenase subunit PaaJ 2871632..2872165 Pseudomonas putida HB3267 14289016 YP_007229469.1 CDS B479_13150 NC_019905.1 2872181 2873257 D COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; phenylacetate-CoA oxygenase/reductase subunit PaaK 2872181..2873257 Pseudomonas putida HB3267 14289017 YP_007229470.1 CDS B479_13155 NC_019905.1 2873484 2873792 D COG3162 Predicted membrane protein; hypothetical protein 2873484..2873792 Pseudomonas putida HB3267 14289018 YP_007229471.1 CDS B479_13160 NC_019905.1 2873789 2875351 D COG4147 Predicted symporter; acetate permease 2873789..2875351 Pseudomonas putida HB3267 14289019 YP_007229472.1 CDS B479_13165 NC_019905.1 2875392 2876624 D outer membrane porin 2875392..2876624 Pseudomonas putida HB3267 14289020 YP_007229473.1 CDS B479_13170 NC_019905.1 2876653 2878704 D COG1012 NAD-dependent aldehyde dehydrogenases; bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase 2876653..2878704 Pseudomonas putida HB3267 14289021 YP_007229474.1 CDS B479_13175 NC_019905.1 2879420 2879689 R hypothetical protein complement(2879420..2879689) Pseudomonas putida HB3267 14289022 YP_007229475.1 CDS B479_13180 NC_019905.1 2879857 2880066 R COG3729 General stress protein; hypothetical protein complement(2879857..2880066) Pseudomonas putida HB3267 14289023 YP_007229476.1 CDS B479_13185 NC_019905.1 2880346 2884128 D COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; signal transduction histidine kinase with CheB and CheR activity 2880346..2884128 Pseudomonas putida HB3267 14289024 YP_007229477.1 CDS B479_13190 NC_019905.1 2884210 2884608 D COG1051 ADP-ribose pyrophosphatase; MutT/nudix family protein 2884210..2884608 Pseudomonas putida HB3267 14289025 YP_007229478.1 CDS B479_13195 NC_019905.1 2884734 2885285 R COG0740 Protease subunit of ATP-dependent Clp proteases; putative Clp protease complement(2884734..2885285) Pseudomonas putida HB3267 14289026 YP_007229479.1 CDS B479_13200 NC_019905.1 2885308 2885682 R COG5478 Predicted small integral membrane protein; hypothetical protein complement(2885308..2885682) Pseudomonas putida HB3267 14289027 YP_007229480.1 CDS B479_13205 NC_019905.1 2885848 2886765 D COG1801 Uncharacterized conserved protein; hypothetical protein 2885848..2886765 Pseudomonas putida HB3267 14289028 YP_007229481.1 CDS B479_13210 NC_019905.1 2886762 2887547 D COG3568 Metal-dependent hydrolase; endonuclease/exonuclease/phosphatase 2886762..2887547 Pseudomonas putida HB3267 14289029 YP_007229482.1 CDS B479_13215 NC_019905.1 2887544 2888746 D COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; cardiolipin synthase 2 2887544..2888746 Pseudomonas putida HB3267 14289030 YP_007229483.1 CDS B479_13220 NC_019905.1 2888746 2889693 D COG0392 Predicted integral membrane protein; hypothetical protein 2888746..2889693 Pseudomonas putida HB3267 14289031 YP_007229484.1 CDS B479_13225 NC_019905.1 2889728 2890156 D hypothetical protein 2889728..2890156 Pseudomonas putida HB3267 14289032 YP_007229485.1 CDS B479_13230 NC_019905.1 2890348 2890572 R Metallothionein, putative complement(2890348..2890572) Pseudomonas putida HB3267 14289033 YP_007229486.1 CDS B479_13235 NC_019905.1 2890569 2891033 R hypothetical protein complement(2890569..2891033) Pseudomonas putida HB3267 14289034 YP_007229487.1 CDS ligD NC_019905.1 2891162 2893654 D COG1793 ATP-dependent DNA ligase; ATP-dependent DNA ligase 2891162..2893654 Pseudomonas putida HB3267 14289035 YP_007229488.1 CDS B479_13245 NC_019905.1 2893709 2894752 D COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase 2893709..2894752 Pseudomonas putida HB3267 14289036 YP_007229489.1 CDS B479_13250 NC_019905.1 2894749 2895504 D COG2120 Uncharacterized proteins, LmbE homologs; LmbE family protein 2894749..2895504 Pseudomonas putida HB3267 14289037 YP_007229490.1 CDS B479_13255 NC_019905.1 2895516 2896115 D COG0500 SAM-dependent methyltransferases; type 12 methyltransferase 2895516..2896115 Pseudomonas putida HB3267 14289038 YP_007229491.1 CDS B479_13260 NC_019905.1 2896112 2896771 D COG0463 Glycosyltransferases involved in cell wall biogenesis; glycosyl transferase family protein 2896112..2896771 Pseudomonas putida HB3267 14289039 YP_007229492.1 CDS B479_13265 NC_019905.1 2896994 2897815 R COG1273 Uncharacterized conserved protein; Ku family containing protein complement(2896994..2897815) Pseudomonas putida HB3267 14289040 YP_007229493.1 CDS B479_13270 NC_019905.1 2897890 2898795 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); oxidoreductase complement(2897890..2898795) Pseudomonas putida HB3267 14289041 YP_007229494.1 CDS B479_13275 NC_019905.1 2898923 2899510 R COG0775 Nucleoside phosphorylase; nucleoside phosphorylase-like protein complement(2898923..2899510) Pseudomonas putida HB3267 14289042 YP_007229495.1 CDS B479_13280 NC_019905.1 2899567 2900673 R COG2170 Uncharacterized conserved protein; carboxylate-amine ligase complement(2899567..2900673) Pseudomonas putida HB3267 14289043 YP_007229496.1 CDS B479_13285 NC_019905.1 2900680 2901633 R COG2890 Methylase of polypeptide chain release factors; methyltransferase small complement(2900680..2901633) Pseudomonas putida HB3267 14289044 YP_007229497.1 CDS B479_13290 NC_019905.1 2901633 2902958 R COG0225 Peptide methionine sulfoxide reductase; hypothetical protein complement(2901633..2902958) Pseudomonas putida HB3267 14289045 YP_007229498.1 CDS B479_13295 NC_019905.1 2902989 2903186 R hypothetical protein complement(2902989..2903186) Pseudomonas putida HB3267 14289046 YP_007229499.1 CDS B479_13300 NC_019905.1 2903237 2903413 R hypothetical protein complement(2903237..2903413) Pseudomonas putida HB3267 14289047 YP_007229500.1 CDS B479_13305 NC_019905.1 2903562 2904845 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(2903562..2904845) Pseudomonas putida HB3267 14289048 YP_007229501.1 CDS B479_13310 NC_019905.1 2904850 2905758 R COG0656 Aldo/keto reductases, related to diketogulonate reductase; aldo/keto reductase complement(2904850..2905758) Pseudomonas putida HB3267 14289049 YP_007229502.1 CDS B479_13315 NC_019905.1 2905848 2906711 R COG2837 Predicted iron-dependent peroxidase; Dyp-type peroxidase family protein complement(2905848..2906711) Pseudomonas putida HB3267 14289050 YP_007229503.1 CDS B479_13320 NC_019905.1 2906896 2907789 D COG0385 Predicted Na+-dependent transporter; bile acid:sodium symporter 2906896..2907789 Pseudomonas putida HB3267 14289051 YP_007229504.1 CDS B479_13325 NC_019905.1 2907825 2908292 R beta-carotene hydroxylase complement(2907825..2908292) Pseudomonas putida HB3267 14289052 YP_007229505.1 CDS B479_13330 NC_019905.1 2908459 2908968 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; N-acetyltransferase GCN5 2908459..2908968 Pseudomonas putida HB3267 14289053 YP_007229506.1 CDS B479_13335 NC_019905.1 2909101 2910669 R COG2199 FOG: GGDEF domain; diguanylate cyclase complement(2909101..2910669) Pseudomonas putida HB3267 14289054 YP_007229507.1 CDS B479_13340 NC_019905.1 2910822 2911322 D COG3652 Predicted outer membrane protein; lipoprotein 2910822..2911322 Pseudomonas putida HB3267 14289055 YP_007229508.1 CDS B479_13345 NC_019905.1 2911331 2911582 D hypothetical protein 2911331..2911582 Pseudomonas putida HB3267 14289056 YP_007229509.1 CDS B479_13350 NC_019905.1 2911758 2912750 R Tn4652, cointegrate resolution protein T complement(2911758..2912750) Pseudomonas putida HB3267 14289057 YP_007229510.1 CDS B479_13355 NC_019905.1 2912979 2914220 R COG0402 Cytosine deaminase and related metal-dependent hydrolases; N-isopropylammelide isopropylaminohydrolase complement(2912979..2914220) Pseudomonas putida HB3267 14289058 YP_007229511.1 CDS B479_13360 NC_019905.1 2914399 2915055 R COG0819 Putative transcription activator; TenA family transcription regulator complement(2914399..2915055) Pseudomonas putida HB3267 14289059 YP_007229512.1 CDS B479_13365 NC_019905.1 2915058 2915705 R COG0819 Putative transcription activator; TenA family transcription regulator complement(2915058..2915705) Pseudomonas putida HB3267 14289060 YP_007229513.1 CDS B479_13370 NC_019905.1 2916125 2919517 D COG2132 Putative multicopper oxidases; multicopper oxidase type 2 2916125..2919517 Pseudomonas putida HB3267 14289061 YP_007229514.1 CDS B479_13375 NC_019905.1 2919617 2920657 D COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems; electron transport protein SCO1/SenC 2919617..2920657 Pseudomonas putida HB3267 14289062 YP_007229515.1 CDS B479_13380 NC_019905.1 2920739 2923060 D COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; diguanylate cyclase/phosphodiesterase 2920739..2923060 Pseudomonas putida HB3267 14289063 YP_007229516.1 CDS B479_13385 NC_019905.1 2923302 2924252 D COG0582 Integrase; integrase family protein 2923302..2924252 Pseudomonas putida HB3267 14289064 YP_007229517.1 CDS B479_13390 NC_019905.1 2924242 2925237 R COG3386 Gluconolactonase; SMP-30/gluconolaconase/LRE domain-containing protein complement(2924242..2925237) Pseudomonas putida HB3267 14289065 YP_007229518.1 CDS B479_13395 NC_019905.1 2925325 2926464 R COG1929 Glycerate kinase; glycerate kinase complement(2925325..2926464) Pseudomonas putida HB3267 14289066 YP_007229519.1 CDS B479_13400 NC_019905.1 2926687 2927784 R COG3835 Sugar diacid utilization regulator; CdaR family transcriptional regulator complement(2926687..2927784) Pseudomonas putida HB3267 14289067 YP_007229520.1 CDS B479_13405 NC_019905.1 2927948 2929276 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 2927948..2929276 Pseudomonas putida HB3267 14289068 YP_007229521.1 CDS B479_13410 NC_019905.1 2929475 2930995 D COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2929475..2930995 Pseudomonas putida HB3267 14289069 YP_007229522.1 CDS B479_13415 NC_019905.1 2931067 2932077 D COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); aldo/keto reductase 2931067..2932077 Pseudomonas putida HB3267 14289070 YP_007229523.1 CDS B479_13420 NC_019905.1 2932194 2933174 R COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; luciferase family protein complement(2932194..2933174) Pseudomonas putida HB3267 14289071 YP_007229524.1 CDS B479_13425 NC_019905.1 2933275 2934186 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2933275..2934186) Pseudomonas putida HB3267 14289072 YP_007229525.1 CDS B479_13430 NC_019905.1 2934264 2934917 R TraX family protein complement(2934264..2934917) Pseudomonas putida HB3267 14289073 YP_007229526.1 CDS B479_13435 NC_019905.1 2934960 2936036 R COG1988 Predicted membrane-bound metal-dependent hydrolases; membrane-bound metal-dependent hydrolase complement(2934960..2936036) Pseudomonas putida HB3267 14289074 YP_007229527.1 CDS B479_13440 NC_019905.1 2936289 2937539 R outer membrane porin complement(2936289..2937539) Pseudomonas putida HB3267 14289075 YP_007229528.1 CDS B479_13445 NC_019905.1 2937594 2938793 R COG3135 Uncharacterized protein involved in benzoate metabolism; benzoate transporter complement(2937594..2938793) Pseudomonas putida HB3267 14289076 YP_007229529.1 CDS B479_13450 NC_019905.1 2938925 2939839 R COG3485 Protocatechuate 3,4-dioxygenase beta subunit; catechol 1,2-dioxygenase complement(2938925..2939839) Pseudomonas putida HB3267 14289077 YP_007229530.1 CDS B479_13455 NC_019905.1 2939870 2941198 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(2939870..2941198) Pseudomonas putida HB3267 14289078 YP_007229531.1 CDS benD NC_019905.1 2941256 2942017 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase complement(2941256..2942017) Pseudomonas putida HB3267 14289079 YP_007229532.1 CDS B479_13465 NC_019905.1 2942163 2943173 R COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; oxidoreductase, FAD/NAD(P)-binding subunit complement(2942163..2943173) Pseudomonas putida HB3267 14289080 YP_007229533.1 CDS B479_13470 NC_019905.1 2943247 2943732 R COG5517 Small subunit of phenylpropionate dioxygenase; benzoate 1,2-dioxygenase small subunit complement(2943247..2943732) Pseudomonas putida HB3267 14289081 YP_007229534.1 CDS B479_13475 NC_019905.1 2943729 2945087 R COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit; benzoate dioxygenase subunit alpha complement(2943729..2945087) Pseudomonas putida HB3267 14289082 YP_007229535.1 CDS B479_13480 NC_019905.1 2945171 2946076 R COG3209 Rhs family protein; hypothetical protein complement(2945171..2946076) Pseudomonas putida HB3267 14289083 YP_007229536.1 CDS B479_13485 NC_019905.1 2946171 2947127 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(2946171..2947127) Pseudomonas putida HB3267 14289084 YP_007229537.1 CDS B479_13490 NC_019905.1 2947386 2948078 R hypothetical protein complement(2947386..2948078) Pseudomonas putida HB3267 14289085 YP_007229538.1 CDS B479_13495 NC_019905.1 2948343 2949134 R COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; histidinol-phosphate phosphatase complement(2948343..2949134) Pseudomonas putida HB3267 14289086 YP_007229539.1 CDS B479_13500 NC_019905.1 2949282 2950172 D COG0589 Universal stress protein UspA and related nucleotide-binding proteins; UspA domain-containing protein 2949282..2950172 Pseudomonas putida HB3267 14289087 YP_007229540.1 CDS B479_13505 NC_019905.1 2950619 2952754 D COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent siderophore receptor 2950619..2952754 Pseudomonas putida HB3267 14289088 YP_007229541.1 CDS B479_13510 NC_019905.1 2952923 2953444 R hypothetical protein complement(2952923..2953444) Pseudomonas putida HB3267 14289089 YP_007229542.1 CDS B479_13515 NC_019905.1 2953642 2954388 R phytanoyl-CoA dioxygenase complement(2953642..2954388) Pseudomonas putida HB3267 14289090 YP_007229543.1 CDS B479_13520 NC_019905.1 2954443 2954886 R hypothetical protein complement(2954443..2954886) Pseudomonas putida HB3267 14289091 YP_007229544.1 CDS B479_13525 NC_019905.1 2955012 2955878 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(2955012..2955878) Pseudomonas putida HB3267 14289092 YP_007229545.1 CDS B479_13530 NC_019905.1 2955986 2957371 D COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase 2955986..2957371 Pseudomonas putida HB3267 14289093 YP_007229546.1 CDS B479_13535 NC_019905.1 2957524 2959434 R COG0210 Superfamily I DNA and RNA helicases; hypothetical protein complement(2957524..2959434) Pseudomonas putida HB3267 14289094 YP_007229547.1 CDS B479_13540 NC_019905.1 2959612 2960511 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(2959612..2960511) Pseudomonas putida HB3267 14289095 YP_007229548.1 CDS B479_13545 NC_019905.1 2960695 2962053 D COG0174 Glutamine synthetase; glutamate-putrescine ligase 2960695..2962053 Pseudomonas putida HB3267 14289096 YP_007229549.1 CDS B479_13550 NC_019905.1 2962244 2963332 D COG0687 Spermidine/putrescine-binding periplasmic protein; extracellular solute-binding protein 2962244..2963332 Pseudomonas putida HB3267 14289097 YP_007229550.1 CDS B479_13555 NC_019905.1 2963346 2964641 D COG0665 Glycine/D-amino acid oxidases (deaminating); FAD dependent oxidoreductase 2963346..2964641 Pseudomonas putida HB3267 14289098 YP_007229551.1 CDS B479_13560 NC_019905.1 2964746 2965051 R COG2944 Predicted transcriptional regulator; DNA-binding protein complement(2964746..2965051) Pseudomonas putida HB3267 14289099 YP_007229552.1 CDS B479_13565 NC_019905.1 2965322 2965999 D hypothetical protein 2965322..2965999 Pseudomonas putida HB3267 14289100 YP_007229553.1 CDS B479_13570 NC_019905.1 2966140 2967516 R COG1760 L-serine deaminase; L-serine dehydratase 1 complement(2966140..2967516) Pseudomonas putida HB3267 14289101 YP_007229554.1 CDS B479_13575 NC_019905.1 2967663 2968604 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 2967663..2968604 Pseudomonas putida HB3267 14289102 YP_007229555.1 CDS B479_13580 NC_019905.1 2968832 2970253 R COG2148 Sugar transferases involved in lipopolysaccharide synthesis; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase complement(2968832..2970253) Pseudomonas putida HB3267 14289103 YP_007229556.1 CDS B479_13585 NC_019905.1 2970403 2971179 R COG1922 Teichoic acid biosynthesis proteins; WecB/TagA/CpsF family glycosyl transferase complement(2970403..2971179) Pseudomonas putida HB3267 14289104 YP_007229557.1 CDS B479_13590 NC_019905.1 2971179 2972366 R COG1215 Glycosyltransferases, probably involved in cell wall biogenesis; glycosyl transferase family protein complement(2971179..2972366) Pseudomonas putida HB3267 14289105 YP_007229558.1 CDS B479_13595 NC_019905.1 2972363 2973565 R COG0438 Glycosyltransferase; group 1 glycosyl transferase complement(2972363..2973565) Pseudomonas putida HB3267 14289106 YP_007229559.1 CDS B479_13600 NC_019905.1 2973626 2974627 R COG2990 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2973626..2974627) Pseudomonas putida HB3267 14289107 YP_007229560.1 CDS B479_13605 NC_019905.1 2974640 2975617 R COG0463 Glycosyltransferases involved in cell wall biogenesis; glycosyl transferase family protein complement(2974640..2975617) Pseudomonas putida HB3267 14289108 YP_007229561.1 CDS B479_13610 NC_019905.1 2975623 2976147 R COG1045 Serine acetyltransferase; serine O-acetyltransferase complement(2975623..2976147) Pseudomonas putida HB3267 14289109 YP_007229562.1 CDS B479_13615 NC_019905.1 2976156 2977112 R COG1216 Predicted glycosyltransferases; glycosyl transferase family protein complement(2976156..2977112) Pseudomonas putida HB3267 14289110 YP_007229563.1 CDS B479_13620 NC_019905.1 2977105 2977698 R COG0110 Acetyltransferase (isoleucine patch superfamily); hexapeptide repeat-containing transferase complement(2977105..2977698) Pseudomonas putida HB3267 14289111 YP_007229564.1 CDS B479_13625 NC_019905.1 2977828 2979294 R COG2303 Choline dehydrogenase and related flavoproteins; GMC oxidoreductase complement(2977828..2979294) Pseudomonas putida HB3267 14289112 YP_007229565.1 CDS B479_13630 NC_019905.1 2979531 2980907 R COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; polysaccharide biosynthesis protein complement(2979531..2980907) Pseudomonas putida HB3267 14289113 YP_007229566.1 CDS B479_13635 NC_019905.1 2981004 2982530 D hypothetical protein 2981004..2982530 Pseudomonas putida HB3267 14289114 YP_007229567.1 CDS B479_13640 NC_019905.1 2982536 2985151 D hypothetical protein 2982536..2985151 Pseudomonas putida HB3267 14289115 YP_007229568.1 CDS B479_13645 NC_019905.1 2985231 2986208 D COG1087 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 2985231..2986208 Pseudomonas putida HB3267 14289116 YP_007229569.1 CDS B479_13650 NC_019905.1 2986400 2987206 R COG0489 ATPases involved in chromosome partitioning; non-specific protein-tyrosine kinase complement(2986400..2987206) Pseudomonas putida HB3267 14289117 YP_007229570.1 CDS B479_13655 NC_019905.1 2987217 2988707 R COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; lipopolysaccharide biosynthesis protein complement(2987217..2988707) Pseudomonas putida HB3267 14289118 YP_007229571.1 CDS B479_13660 NC_019905.1 2988799 2989785 R hypothetical protein complement(2988799..2989785) Pseudomonas putida HB3267 14289119 YP_007229572.1 CDS B479_13665 NC_019905.1 2989939 2990496 R COG1596 Periplasmic protein involved in polysaccharide export; polysaccharide export protein complement(2989939..2990496) Pseudomonas putida HB3267 14289120 YP_007229573.1 CDS B479_13670 NC_019905.1 2990755 2990931 R hypothetical protein complement(2990755..2990931) Pseudomonas putida HB3267 14289121 YP_007229574.1 CDS B479_13675 NC_019905.1 2991181 2991723 R COG1396 Predicted transcriptional regulators; XRE family transcriptional regulator complement(2991181..2991723) Pseudomonas putida HB3267 14289122 YP_007229575.1 CDS B479_13680 NC_019905.1 2991946 2993364 R COG2031 Short chain fatty acids transporter; short-chain fatty acid transporter complement(2991946..2993364) Pseudomonas putida HB3267 14289123 YP_007229576.1 CDS B479_13685 NC_019905.1 2993540 2994196 R COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; 3-oxoacid CoA-transferase subunit B complement(2993540..2994196) Pseudomonas putida HB3267 14289124 YP_007229577.1 CDS B479_13690 NC_019905.1 2994232 2994930 R COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; 3-oxoacid CoA-transferase subunit A complement(2994232..2994930) Pseudomonas putida HB3267 14289125 YP_007229578.1 CDS B479_13695 NC_019905.1 2995071 2995976 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 2995071..2995976 Pseudomonas putida HB3267 14289126 YP_007229579.1 CDS B479_13700 NC_019905.1 2995964 2996785 D COG0656 Aldo/keto reductases, related to diketogulonate reductase; aldo/keto reductase 2995964..2996785 Pseudomonas putida HB3267 14289127 YP_007229580.1 CDS dnaE2 NC_019905.1 2996916 2999996 R COG0587 DNA polymerase III, alpha subunit; error-prone DNA polymerase complement(2996916..2999996) Pseudomonas putida HB3267 14289128 YP_007229581.1 CDS B479_13710 NC_019905.1 2999993 3001411 R COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; hypothetical protein complement(2999993..3001411) Pseudomonas putida HB3267 14289129 YP_007229582.1 CDS B479_13715 NC_019905.1 3001418 3002038 R hypothetical protein complement(3001418..3002038) Pseudomonas putida HB3267 14289130 YP_007229583.1 CDS B479_13720 NC_019905.1 3002038 3002646 R COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); LexA repressor complement(3002038..3002646) Pseudomonas putida HB3267 14289131 YP_007229584.1 CDS B479_13725 NC_019905.1 3003036 3003437 D hypothetical protein 3003036..3003437 Pseudomonas putida HB3267 14289132 YP_007229585.1 CDS B479_13730 NC_019905.1 3003434 3003751 D hypothetical protein 3003434..3003751 Pseudomonas putida HB3267 14289133 YP_007229586.1 CDS B479_13735 NC_019905.1 3004054 3005772 R COG0210 Superfamily I DNA and RNA helicases; putative ATP-dependent helicase complement(3004054..3005772) Pseudomonas putida HB3267 14289134 YP_007229587.1 CDS B479_13740 NC_019905.1 3005776 3007587 R COG3593 Predicted ATP-dependent endonuclease of the OLD family; ATP-dependent endonuclease family protein complement(3005776..3007587) Pseudomonas putida HB3267 14289135 YP_007229588.1 CDS B479_13745 NC_019905.1 3007823 3008791 R hypothetical protein complement(3007823..3008791) Pseudomonas putida HB3267 14289136 YP_007229589.1 CDS B479_13750 NC_019905.1 3009218 3009892 D COG1309 Transcriptional regulator; TetR family transcriptional regulator 3009218..3009892 Pseudomonas putida HB3267 14289137 YP_007229590.1 CDS B479_13755 NC_019905.1 3010150 3010350 D hypothetical protein 3010150..3010350 Pseudomonas putida HB3267 14289138 YP_007229591.1 CDS B479_13760 NC_019905.1 3010479 3012098 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis transducer 3010479..3012098 Pseudomonas putida HB3267 14289139 YP_007229592.1 CDS B479_13765 NC_019905.1 3012182 3013288 D hypothetical protein 3012182..3013288 Pseudomonas putida HB3267 14289140 YP_007229593.1 CDS B479_13770 NC_019905.1 3013299 3013703 D hypothetical protein 3013299..3013703 Pseudomonas putida HB3267 14289141 YP_007229594.1 CDS B479_13775 NC_019905.1 3013882 3014439 D COG1309 Transcriptional regulator; NfxB family transcriptional regulator 3013882..3014439 Pseudomonas putida HB3267 14289142 YP_007229595.1 CDS B479_13780 NC_019905.1 3014525 3015928 R COG1538 Outer membrane protein; outer membrane protein OprJ complement(3014525..3015928) Pseudomonas putida HB3267 14289143 YP_007229596.1 CDS B479_13785 NC_019905.1 3015928 3019056 R COG0841 Cation/multidrug efflux pump; multidrug efflux RND transporter MexD complement(3015928..3019056) Pseudomonas putida HB3267 14289144 YP_007229597.1 CDS B479_13790 NC_019905.1 3019072 3020181 R COG0845 Membrane-fusion protein; multidrug efflux RND membrane fusion protein MexC complement(3019072..3020181) Pseudomonas putida HB3267 14289145 YP_007229598.1 CDS B479_13795 NC_019905.1 3020300 3020866 D COG1309 Transcriptional regulator; NfxB family transcriptional regulator 3020300..3020866 Pseudomonas putida HB3267 14289146 YP_007229599.1 CDS B479_13800 NC_019905.1 3020927 3022240 R hypothetical protein complement(3020927..3022240) Pseudomonas putida HB3267 14289147 YP_007229600.1 CDS B479_13805 NC_019905.1 3022420 3023289 D COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; hypothetical protein 3022420..3023289 Pseudomonas putida HB3267 14289148 YP_007229601.1 CDS B479_13810 NC_019905.1 3023401 3024363 R COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor; BNR repeat-containing protein complement(3023401..3024363) Pseudomonas putida HB3267 14289149 YP_007229602.1 CDS B479_13815 NC_019905.1 3024374 3026725 R COG1033 Predicted exporters of the RND superfamily; hypothetical protein complement(3024374..3026725) Pseudomonas putida HB3267 14289150 YP_007229603.1 CDS B479_13820 NC_019905.1 3026797 3028383 R hypothetical protein complement(3026797..3028383) Pseudomonas putida HB3267 14289151 YP_007229604.1 CDS B479_13825 NC_019905.1 3028468 3029889 R hypothetical protein complement(3028468..3029889) Pseudomonas putida HB3267 14289152 YP_007229605.1 CDS B479_13830 NC_019905.1 3030282 3030989 R hypothetical protein complement(3030282..3030989) Pseudomonas putida HB3267 14289153 YP_007229606.1 CDS B479_13835 NC_019905.1 3031007 3032374 R COG0665 Glycine/D-amino acid oxidases (deaminating); phytoene dehydrogenase complement(3031007..3032374) Pseudomonas putida HB3267 14289154 YP_007229607.1 CDS B479_13840 NC_019905.1 3032411 3033298 R COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; hypothetical protein complement(3032411..3033298) Pseudomonas putida HB3267 14289155 YP_007229608.1 CDS B479_13845 NC_019905.1 3033843 3034373 D COG1309 Transcriptional regulator; TetR family transcriptional regulator 3033843..3034373 Pseudomonas putida HB3267 14289156 YP_007229609.1 CDS B479_13850 NC_019905.1 3034809 3036194 D COG2072 Predicted flavoprotein involved in K+ transport; monooxygenase flavin-binding family protein 3034809..3036194 Pseudomonas putida HB3267 14289157 YP_007229610.1 CDS B479_13855 NC_019905.1 3036191 3037066 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase 3036191..3037066 Pseudomonas putida HB3267 14289158 YP_007229611.1 CDS B479_13860 NC_019905.1 3037261 3038418 D COG1454 Alcohol dehydrogenase, class IV; 1,3-propanediol dehydrogenase 3037261..3038418 Pseudomonas putida HB3267 14289159 YP_007229612.1 CDS B479_13865 NC_019905.1 3038431 3039762 D COG0531 Amino acid transporters; amino acid permease 3038431..3039762 Pseudomonas putida HB3267 14289160 YP_007229613.1 CDS B479_13870 NC_019905.1 3039842 3041266 D COG1012 NAD-dependent aldehyde dehydrogenases; gamma-aminobutyraldehyde dehydrogenase 3039842..3041266 Pseudomonas putida HB3267 14289161 YP_007229614.1 CDS B479_13875 NC_019905.1 3041312 3042565 D COG0160 4-aminobutyrate aminotransferase and related aminotransferases; diaminobutyrate--2-oxoglutarate aminotransferase 3041312..3042565 Pseudomonas putida HB3267 14289162 YP_007229615.1 CDS B479_13880 NC_019905.1 3042662 3044041 D COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; aminotransferase 3042662..3044041 Pseudomonas putida HB3267 14289163 YP_007229616.1 CDS B479_13885 NC_019905.1 3044096 3045004 D COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; oxidoreductase 3044096..3045004 Pseudomonas putida HB3267 14289164 YP_007229617.1 CDS B479_13890 NC_019905.1 3045273 3046931 R COG4147 Predicted symporter; acetate permease complement(3045273..3046931) Pseudomonas putida HB3267 14289165 YP_007229618.1 CDS B479_13895 NC_019905.1 3046928 3047251 R COG3162 Predicted membrane protein; hypothetical protein complement(3046928..3047251) Pseudomonas putida HB3267 14289166 YP_007229619.1 CDS B479_13900 NC_019905.1 3047308 3049002 R COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; acyl-CoA synthetase complement(3047308..3049002) Pseudomonas putida HB3267 14289167 YP_007229620.1 CDS B479_13905 NC_019905.1 3049044 3049811 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short chain dehydrogenase/reductase oxidoreductase complement(3049044..3049811) Pseudomonas putida HB3267 14289168 YP_007229621.1 CDS B479_13910 NC_019905.1 3049811 3050983 R COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase complement(3049811..3050983) Pseudomonas putida HB3267 14289169 YP_007229622.1 CDS B479_13915 NC_019905.1 3051037 3051393 R hypothetical protein complement(3051037..3051393) Pseudomonas putida HB3267 14289170 YP_007229623.1 CDS B479_13920 NC_019905.1 3051390 3052448 R COG3173 Predicted aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(3051390..3052448) Pseudomonas putida HB3267 14289171 YP_007229624.1 CDS B479_13925 NC_019905.1 3052651 3054603 D COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains; Fis family transcriptional regulator 3052651..3054603 Pseudomonas putida HB3267 14289172 YP_007229625.1 CDS B479_13930 NC_019905.1 3055164 3055517 R hypothetical protein complement(3055164..3055517) Pseudomonas putida HB3267 14289173 YP_007229626.1 CDS B479_13935 NC_019905.1 3055700 3057193 D COG1961 Site-specific recombinases, DNA invertase Pin homologs; Putative recombinase 3055700..3057193 Pseudomonas putida HB3267 14289174 YP_007229627.1 CDS B479_13940 NC_019905.1 3057193 3058086 D COG1475 Predicted transcriptional regulators; Putative ParB-like protein 3057193..3058086 Pseudomonas putida HB3267 14289175 YP_007229628.1 CDS B479_13945 NC_019905.1 3058083 3058988 D COG1475 Predicted transcriptional regulators; Putative plasmid partitioning protein 3058083..3058988 Pseudomonas putida HB3267 14289176 YP_007229629.1 CDS B479_13950 NC_019905.1 3059110 3059334 R hypothetical protein complement(3059110..3059334) Pseudomonas putida HB3267 14289177 YP_007229630.1 CDS B479_13955 NC_019905.1 3059786 3060877 D COG0582 Integrase; putative phage-related integrase/recombinase 3059786..3060877 Pseudomonas putida HB3267 14289178 YP_007229631.1 CDS B479_13960 NC_019905.1 3060923 3061402 R hypothetical protein complement(3060923..3061402) Pseudomonas putida HB3267 14289179 YP_007229632.1 CDS B479_13965 NC_019905.1 3062241 3062843 R hypothetical protein complement(3062241..3062843) Pseudomonas putida HB3267 14289180 YP_007229633.1 CDS B479_13970 NC_019905.1 3063152 3065065 R hypothetical protein complement(3063152..3065065) Pseudomonas putida HB3267 14289181 YP_007229634.1 CDS B479_13975 NC_019905.1 3065062 3065760 R hypothetical protein complement(3065062..3065760) Pseudomonas putida HB3267 14289182 YP_007229635.1 CDS B479_13980 NC_019905.1 3067387 3068436 R COG4188 Predicted dienelactone hydrolase; hypothetical protein complement(3067387..3068436) Pseudomonas putida HB3267 14289183 YP_007229636.1 CDS B479_13985 NC_019905.1 3068656 3068901 D hypothetical protein 3068656..3068901 Pseudomonas putida HB3267 14289184 YP_007229637.1 CDS B479_13990 NC_019905.1 3069127 3069783 D COG0637 Predicted phosphatase/phosphohexomutase; HAD family hydrolase 3069127..3069783 Pseudomonas putida HB3267 14289185 YP_007229638.1 CDS B479_13995 NC_019905.1 3069962 3070873 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 3069962..3070873 Pseudomonas putida HB3267 14289186 YP_007229639.1 CDS B479_14000 NC_019905.1 3071021 3071794 R COG1414 Transcriptional regulator; IclR family transcriptional regulator complement(3071021..3071794) Pseudomonas putida HB3267 14289187 YP_007229640.1 CDS B479_14005 NC_019905.1 3071860 3073314 R COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; amidase complement(3071860..3073314) Pseudomonas putida HB3267 14289188 YP_007229641.1 CDS B479_14010 NC_019905.1 3073314 3074624 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(3073314..3074624) Pseudomonas putida HB3267 14289189 YP_007229642.1 CDS B479_14015 NC_019905.1 3074707 3075882 R COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; amidohydrolase complement(3074707..3075882) Pseudomonas putida HB3267 14289190 YP_007229643.1 CDS B479_14020 NC_019905.1 3076289 3076657 R hypothetical protein complement(3076289..3076657) Pseudomonas putida HB3267 14289191 YP_007229644.1 CDS B479_14025 NC_019905.1 3076865 3077389 R hypothetical protein complement(3076865..3077389) Pseudomonas putida HB3267 14289192 YP_007229645.1 CDS B479_14030 NC_019905.1 3079557 3080138 R hypothetical protein complement(3079557..3080138) Pseudomonas putida HB3267 14289193 YP_007229646.1 CDS B479_14045 NC_019905.1 3084177 3084980 R hypothetical protein complement(3084177..3084980) Pseudomonas putida HB3267 14289194 YP_007229647.1 CDS B479_14050 NC_019905.1 3084988 3089223 R COG3209 Rhs family protein; YD repeat-containing protein complement(3084988..3089223) Pseudomonas putida HB3267 14289195 YP_007229648.1 CDS B479_14055 NC_019905.1 3089228 3089689 R COG5435 Uncharacterized conserved protein; hypothetical protein complement(3089228..3089689) Pseudomonas putida HB3267 14289196 YP_007229649.1 CDS B479_14060 NC_019905.1 3089730 3090179 R hypothetical protein complement(3089730..3090179) Pseudomonas putida HB3267 14289197 YP_007229650.1 CDS B479_14065 NC_019905.1 3090329 3092182 R COG3501 Uncharacterized protein conserved in bacteria; Rhs element Vgr protein complement(3090329..3092182) Pseudomonas putida HB3267 14289198 YP_007229651.1 CDS B479_14070 NC_019905.1 3092797 3093099 D hypothetical protein 3092797..3093099 Pseudomonas putida HB3267 14289199 YP_007229652.1 CDS B479_14075 NC_019905.1 3093297 3093845 D COG0395 ABC-type sugar transport system, permease component; hypothetical protein 3093297..3093845 Pseudomonas putida HB3267 14289200 YP_007229653.1 CDS B479_14080 NC_019905.1 3093873 3094442 D hypothetical protein 3093873..3094442 Pseudomonas putida HB3267 14289201 YP_007229654.1 CDS B479_14085 NC_019905.1 3094866 3095630 D hypothetical protein 3094866..3095630 Pseudomonas putida HB3267 14289202 YP_007229655.1 CDS B479_14090 NC_019905.1 3095659 3096234 D COG3516 Uncharacterized protein conserved in bacteria; type VI secretion protein 3095659..3096234 Pseudomonas putida HB3267 14289203 YP_007229656.1 CDS B479_14095 NC_019905.1 3096249 3097751 D COG3517 Uncharacterized protein conserved in bacteria; EvpB family type VI secretion protein 3096249..3097751 Pseudomonas putida HB3267 14289204 YP_007229657.1 CDS B479_14100 NC_019905.1 3097778 3098260 D COG3518 Uncharacterized protein conserved in bacteria; type VI secretion system lysozyme-like protein 3097778..3098260 Pseudomonas putida HB3267 14289205 YP_007229658.1 CDS B479_14105 NC_019905.1 3098260 3100080 D COG3519 Uncharacterized protein conserved in bacteria; type VI secretion protein 3098260..3100080 Pseudomonas putida HB3267 14289206 YP_007229659.1 CDS B479_14110 NC_019905.1 3100044 3101114 D COG3520 Uncharacterized protein conserved in bacteria; hypothetical protein 3100044..3101114 Pseudomonas putida HB3267 14289207 YP_007229660.1 CDS B479_14115 NC_019905.1 3101111 3103708 D COG0542 ATPases with chaperone activity, ATP-binding subunit; type VI secretion ATPase 3101111..3103708 Pseudomonas putida HB3267 14289208 YP_007229661.1 CDS B479_14120 NC_019905.1 3103733 3104455 D COG3521 Uncharacterized protein conserved in bacteria; putative lipoprotein 3103733..3104455 Pseudomonas putida HB3267 14289209 YP_007229662.1 CDS B479_14125 NC_019905.1 3104452 3105795 D COG3522 Uncharacterized protein conserved in bacteria; type VI secretion protein 3104452..3105795 Pseudomonas putida HB3267 14289210 YP_007229663.1 CDS B479_14130 NC_019905.1 3105792 3106508 D COG3455 Uncharacterized protein conserved in bacteria; hypothetical protein 3105792..3106508 Pseudomonas putida HB3267 14289211 YP_007229664.1 CDS B479_14135 NC_019905.1 3106539 3110342 D COG3523 Uncharacterized protein conserved in bacteria; ImcF domain-containing protein 3106539..3110342 Pseudomonas putida HB3267 14289212 YP_007229665.1 CDS B479_14140 NC_019905.1 3110339 3111247 D COG3913 Uncharacterized protein conserved in bacteria; hypothetical protein 3110339..3111247 Pseudomonas putida HB3267 14289213 YP_007229666.1 CDS B479_14145 NC_019905.1 3111244 3113739 D COG3523 Uncharacterized protein conserved in bacteria; OmpA/MotB domain-containing protein 3111244..3113739 Pseudomonas putida HB3267 14289214 YP_007229667.1 CDS B479_14150 NC_019905.1 3113883 3114401 D COG3157 Hemolysin-coregulated protein (uncharacterized); Hcp1 family type VI secretion system effector 3113883..3114401 Pseudomonas putida HB3267 14289215 YP_007229668.1 CDS B479_14155 NC_019905.1 3114497 3115594 D COG3515 Uncharacterized protein conserved in bacteria; ImpA family type VI secretion-associated protein 3114497..3115594 Pseudomonas putida HB3267 14289216 YP_007229669.1 CDS B479_14160 NC_019905.1 3115750 3118266 D COG0178 Excinuclease ATPase subunit; excinuclease ABC subunit A 3115750..3118266 Pseudomonas putida HB3267 14289217 YP_007229670.1 CDS B479_14165 NC_019905.1 3118426 3120075 D COG0477 Permeases of the major facilitator superfamily; Major facilitator transporter 3118426..3120075 Pseudomonas putida HB3267 14289218 YP_007229671.1 CDS B479_14170 NC_019905.1 3120072 3121205 D COG1566 Multidrug resistance efflux pump; secretion protein HlyD family protein 3120072..3121205 Pseudomonas putida HB3267 14289219 YP_007229672.1 CDS B479_14175 NC_019905.1 3121621 3122214 D hypothetical protein 3121621..3122214 Pseudomonas putida HB3267 14289220 YP_007229673.1 CDS B479_14180 NC_019905.1 3122335 3123210 R COG0679 Predicted permeases; auxin efflux carrier complement(3122335..3123210) Pseudomonas putida HB3267 14289221 YP_007229674.1 CDS B479_14185 NC_019905.1 3123731 3125035 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 3123731..3125035 Pseudomonas putida HB3267 14289222 YP_007229675.1 CDS B479_14190 NC_019905.1 3125112 3126074 R COG1052 Lactate dehydrogenase and related dehydrogenases; gluconate 2-dehydrogenase complement(3125112..3126074) Pseudomonas putida HB3267 14289223 YP_007229676.1 CDS B479_14195 NC_019905.1 3126086 3127378 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(3126086..3127378) Pseudomonas putida HB3267 14289224 YP_007229677.1 CDS B479_14200 NC_019905.1 3127436 3128386 R COG0524 Sugar kinases, ribokinase family; ribokinase-like domain-containing protein complement(3127436..3128386) Pseudomonas putida HB3267 14289225 YP_007229678.1 CDS B479_14205 NC_019905.1 3128379 3129167 R COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; xylose isomerase domain-containing protein TIM barrel complement(3128379..3129167) Pseudomonas putida HB3267 14289226 YP_007229679.1 CDS B479_14210 NC_019905.1 3129235 3130254 R COG1609 Transcriptional regulators; LacI family transcriptional regulator complement(3129235..3130254) Pseudomonas putida HB3267 14289227 YP_007229680.1 CDS B479_14215 NC_019905.1 3130527 3131771 R COG2010 Cytochrome c, mono- and diheme variants; gluconate 2-dehydrogenase complement(3130527..3131771) Pseudomonas putida HB3267 14289228 YP_007229681.1 CDS B479_14220 NC_019905.1 3131784 3133568 R COG2303 Choline dehydrogenase and related flavoproteins; gluconate 2-dehydrogenase complement(3131784..3133568) Pseudomonas putida HB3267 14289229 YP_007229682.1 CDS B479_14225 NC_019905.1 3133572 3134312 R Gluconate 2-dehydrogenase acceptor subunit complement(3133572..3134312) Pseudomonas putida HB3267 14289230 YP_007229683.1 CDS B479_14230 NC_019905.1 3134759 3136087 D hypothetical protein 3134759..3136087 Pseudomonas putida HB3267 14289231 YP_007229684.1 CDS B479_14235 NC_019905.1 3136120 3138351 D hypothetical protein 3136120..3138351 Pseudomonas putida HB3267 14289232 YP_007229685.1 CDS B479_14240 NC_019905.1 3138367 3138840 D curlin-associated protein 3138367..3138840 Pseudomonas putida HB3267 14289233 YP_007229686.1 CDS B479_14245 NC_019905.1 3138857 3140302 D curlin-associated protein 3138857..3140302 Pseudomonas putida HB3267 14289234 YP_007229687.1 CDS B479_14250 NC_019905.1 3140437 3141114 D COG3145 Alkylated DNA repair protein; alpha-ketoglutarate-dependent dioxygenase AlkB 3140437..3141114 Pseudomonas putida HB3267 14289235 YP_007229688.1 CDS B479_14255 NC_019905.1 3141282 3141569 D hypothetical protein 3141282..3141569 Pseudomonas putida HB3267 14289236 YP_007229689.1 CDS B479_14260 NC_019905.1 3141666 3142280 D hypothetical protein 3141666..3142280 Pseudomonas putida HB3267 14289237 YP_007229690.1 CDS B479_14265 NC_019905.1 3142300 3142539 R hypothetical protein complement(3142300..3142539) Pseudomonas putida HB3267 14289238 YP_007229691.1 CDS B479_14270 NC_019905.1 3142745 3143674 R COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; alcohol dehydrogenase complement(3142745..3143674) Pseudomonas putida HB3267 14289239 YP_007229692.1 CDS B479_14275 NC_019905.1 3143746 3144633 R COG1741 Pirin-related protein; pirin domain-containing protein complement(3143746..3144633) Pseudomonas putida HB3267 14289240 YP_007229693.1 CDS B479_14280 NC_019905.1 3144754 3145638 R COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold protein complement(3144754..3145638) Pseudomonas putida HB3267 14289241 YP_007229694.1 CDS B479_14285 NC_019905.1 3145660 3146280 R COG1280 Putative threonine efflux protein; lysine exporter protein LysE/YggA complement(3145660..3146280) Pseudomonas putida HB3267 14289242 YP_007229695.1 CDS B479_14290 NC_019905.1 3146414 3146893 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; acetyltransferase 3146414..3146893 Pseudomonas putida HB3267 14289243 YP_007229696.1 CDS B479_14295 NC_019905.1 3147332 3147520 D cobalt transporter, CbtB subunit 3147332..3147520 Pseudomonas putida HB3267 14289244 YP_007229697.1 CDS B479_14300 NC_019905.1 3147531 3148217 D COG5446 Predicted integral membrane protein; cobalt transporter, CbtA subunit 3147531..3148217 Pseudomonas putida HB3267 14289245 YP_007229698.1 CDS B479_14305 NC_019905.1 3148217 3148603 D COG2073 Cobalamin biosynthesis protein CbiG; putative cobalamin biosynthesis protein cobE 3148217..3148603 Pseudomonas putida HB3267 14289246 YP_007229699.1 CDS B479_14310 NC_019905.1 3148637 3149389 D COG2875 Precorrin-4 methylase; precorrin-4 C(11)-methyltransferase 3148637..3149389 Pseudomonas putida HB3267 14289247 YP_007229700.1 CDS B479_14315 NC_019905.1 3149456 3149698 D COG3813 Uncharacterized protein conserved in bacteria; hypothetical protein 3149456..3149698 Pseudomonas putida HB3267 14289248 YP_007229701.1 CDS B479_14320 NC_019905.1 3149918 3150532 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; two component LuxR family transcriptional regulator 3149918..3150532 Pseudomonas putida HB3267 14289249 YP_007229702.1 CDS B479_14325 NC_019905.1 3150546 3153818 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Hpt sensor hybrid histidine kinase 3150546..3153818 Pseudomonas putida HB3267 14289250 YP_007229703.1 CDS B479_14330 NC_019905.1 3153793 3155112 R COG2202 FOG: PAS/PAC domain; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor complement(3153793..3155112) Pseudomonas putida HB3267 14289251 YP_007229704.1 CDS B479_14335 NC_019905.1 3155392 3156411 R COG1609 Transcriptional regulators; LacI family transcriptional regulator complement(3155392..3156411) Pseudomonas putida HB3267 14289252 YP_007229705.1 CDS B479_14340 NC_019905.1 3156618 3157157 D COG3265 Gluconate kinase; gluconokinase 3156618..3157157 Pseudomonas putida HB3267 14289253 YP_007229706.1 CDS B479_14345 NC_019905.1 3157269 3158621 D COG2610 H+/gluconate symporter and related permeases; gluconate transporter 3157269..3158621 Pseudomonas putida HB3267 14289254 YP_007229707.1 CDS B479_14350 NC_019905.1 3158706 3158999 D hypothetical protein 3158706..3158999 Pseudomonas putida HB3267 14289255 YP_007229708.1 CDS B479_14355 NC_019905.1 3159219 3160646 R COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; two component sigma54 specific Fis family transcriptional regulator complement(3159219..3160646) Pseudomonas putida HB3267 14289256 YP_007229709.1 CDS B479_14360 NC_019905.1 3160615 3162108 R COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(3160615..3162108) Pseudomonas putida HB3267 14289257 YP_007229710.1 CDS B479_14365 NC_019905.1 3162406 3163866 R COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(3162406..3163866) Pseudomonas putida HB3267 14289258 YP_007229711.1 CDS B479_14370 NC_019905.1 3164220 3164804 R COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); lytic transglycosylase complement(3164220..3164804) Pseudomonas putida HB3267 14289259 YP_007229712.1 CDS B479_14375 NC_019905.1 3164991 3165416 D COG2165 Type II secretory pathway, pseudopilin PulG; general secretion pathway protein G 3164991..3165416 Pseudomonas putida HB3267 14289260 YP_007229713.1 CDS B479_14380 NC_019905.1 3165428 3166618 D COG1459 Type II secretory pathway, component PulF; type II secretion system protein 3165428..3166618 Pseudomonas putida HB3267 14289261 YP_007229714.1 CDS B479_14385 NC_019905.1 3166788 3168029 D COG0845 Membrane-fusion protein; RND family efflux transporter, MFP subunit 3166788..3168029 Pseudomonas putida HB3267 14289262 YP_007229715.1 CDS B479_14390 NC_019905.1 3168042 3171221 D COG0841 Cation/multidrug efflux pump; hydrophobe/amphiphile efflux-1 (HAE1) family protein 3168042..3171221 Pseudomonas putida HB3267 14289263 YP_007229716.1 CDS B479_14395 NC_019905.1 3171218 3172633 D COG1538 Outer membrane protein; RND efflux system outer membrane lipoprotein 3171218..3172633 Pseudomonas putida HB3267 14289264 YP_007229717.1 CDS B479_14400 NC_019905.1 3172910 3173965 D COG0457 FOG: TPR repeat; hypothetical protein 3172910..3173965 Pseudomonas putida HB3267 14289265 YP_007229718.1 CDS B479_14405 NC_019905.1 3174046 3175662 D COG0642 Signal transduction histidine kinase; histidine kinase 3174046..3175662 Pseudomonas putida HB3267 14289266 YP_007229719.1 CDS B479_14410 NC_019905.1 3175669 3177699 R COG2202 FOG: PAS/PAC domain; PAS/PAC sensor hybrid histidine kinase complement(3175669..3177699) Pseudomonas putida HB3267 14289267 YP_007229720.1 CDS B479_14415 NC_019905.1 3177911 3178597 D COG0693 Putative intracellular protease/amidase; ThiJ/PfpI domain-containing protein 3177911..3178597 Pseudomonas putida HB3267 14289268 YP_007229721.1 CDS B479_14420 NC_019905.1 3178724 3179530 D hypothetical protein 3178724..3179530 Pseudomonas putida HB3267 14289269 YP_007229722.1 CDS B479_14425 NC_019905.1 3179547 3180623 R COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins; 4-hydroxyphenylpyruvate dioxygenase complement(3179547..3180623) Pseudomonas putida HB3267 14289270 YP_007229723.1 CDS B479_14430 NC_019905.1 3180924 3182510 D COG2200 FOG: EAL domain; diguanylate phosphodiesterase 3180924..3182510 Pseudomonas putida HB3267 14289271 YP_007229724.1 CDS B479_14435 NC_019905.1 3182543 3183430 D COG2962 Predicted permeases; transporter DMT superfamily protein 3182543..3183430 Pseudomonas putida HB3267 14289272 YP_007229725.1 CDS B479_14440 NC_019905.1 3183393 3184964 R COG0861 Membrane protein TerC, possibly involved in tellurium resistance; hypothetical protein complement(3183393..3184964) Pseudomonas putida HB3267 14289273 YP_007229726.1 CDS B479_14445 NC_019905.1 3185361 3185942 D COG1280 Putative threonine efflux protein; lysine exporter protein LysE/YggA 3185361..3185942 Pseudomonas putida HB3267 14289274 YP_007229727.1 CDS B479_14450 NC_019905.1 3186042 3186824 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(3186042..3186824) Pseudomonas putida HB3267 14289275 YP_007229728.1 CDS B479_14455 NC_019905.1 3186869 3187987 R hypothetical protein complement(3186869..3187987) Pseudomonas putida HB3267 14289276 YP_007229729.1 CDS B479_14460 NC_019905.1 3188060 3189121 R hypothetical protein complement(3188060..3189121) Pseudomonas putida HB3267 14289277 YP_007229730.1 CDS B479_14465 NC_019905.1 3189554 3193381 D COG4886 Leucine-rich repeat (LRR) protein; hypothetical protein 3189554..3193381 Pseudomonas putida HB3267 14289278 YP_007229731.1 CDS B479_14470 NC_019905.1 3193530 3195149 D COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase 3193530..3195149 Pseudomonas putida HB3267 14289279 YP_007229732.1 CDS B479_14475 NC_019905.1 3195260 3195733 D COG2764 Uncharacterized protein conserved in bacteria; glyoxalase/bleomycin resistance protein/dioxygenase 3195260..3195733 Pseudomonas putida HB3267 14289280 YP_007229733.1 CDS B479_14480 NC_019905.1 3195790 3196971 D COG0656 Aldo/keto reductases, related to diketogulonate reductase; hypothetical protein 3195790..3196971 Pseudomonas putida HB3267 14289281 YP_007229734.1 CDS B479_14485 NC_019905.1 3197204 3198763 R COG1171 Threonine dehydratase; threonine dehydratase complement(3197204..3198763) Pseudomonas putida HB3267 14289282 YP_007229735.1 CDS B479_14490 NC_019905.1 3198945 3199376 R COG4125 Predicted membrane protein; transmembrane pair domain-containing protein complement(3198945..3199376) Pseudomonas putida HB3267 14289283 YP_007229736.1 CDS nfrB NC_019905.1 3199570 3201744 D COG1215 Glycosyltransferases, probably involved in cell wall biogenesis; bacteriophage N4 adsorption protein B 3199570..3201744 Pseudomonas putida HB3267 14289284 YP_007229737.1 CDS B479_14500 NC_019905.1 3201741 3204746 D COG0457 FOG: TPR repeat; bacteriophage N4 receptor, outer membrane subunit 3201741..3204746 Pseudomonas putida HB3267 14289285 YP_007229738.1 CDS B479_14505 NC_019905.1 3204746 3205585 D hypothetical protein 3204746..3205585 Pseudomonas putida HB3267 14289286 YP_007229739.1 CDS B479_14510 NC_019905.1 3205709 3206800 D COG2199 FOG: GGDEF domain; diguanylate cyclase 3205709..3206800 Pseudomonas putida HB3267 14289287 YP_007229740.1 CDS B479_14515 NC_019905.1 3206917 3208215 R COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(3206917..3208215) Pseudomonas putida HB3267 14289288 YP_007229741.1 CDS B479_14520 NC_019905.1 3208222 3208923 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component winged helix family transcriptional regulator complement(3208222..3208923) Pseudomonas putida HB3267 14289289 YP_007229742.1 CDS B479_14525 NC_019905.1 3209205 3210380 D COG0845 Membrane-fusion protein; RND family efflux transporter, MFP subunit 3209205..3210380 Pseudomonas putida HB3267 14289290 YP_007229743.1 CDS B479_14530 NC_019905.1 3210392 3213520 D COG0841 Cation/multidrug efflux pump; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3210392..3213520 Pseudomonas putida HB3267 14289291 YP_007229744.1 CDS mobA NC_019905.1 3213582 3214157 D COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA 3213582..3214157 Pseudomonas putida HB3267 14289292 YP_007229745.1 CDS B479_14540 NC_019905.1 3214341 3216014 R COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; acyl-CoA synthetase complement(3214341..3216014) Pseudomonas putida HB3267 14289293 YP_007229746.1 CDS B479_14545 NC_019905.1 3216146 3217267 R COG3391 Uncharacterized conserved protein; hypothetical protein complement(3216146..3217267) Pseudomonas putida HB3267 14289294 YP_007229747.1 CDS B479_14550 NC_019905.1 3217300 3217623 R quinohemoprotein amine dehydrogenase subunit gamma complement(3217300..3217623) Pseudomonas putida HB3267 14289295 YP_007229748.1 CDS B479_14555 NC_019905.1 3217625 3219055 R COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); quinohemoprotein amine dehydrogenase complement(3217625..3219055) Pseudomonas putida HB3267 14289296 YP_007229749.1 CDS B479_14560 NC_019905.1 3219105 3220733 R hypothetical protein complement(3219105..3220733) Pseudomonas putida HB3267 14289297 YP_007229750.1 CDS B479_14565 NC_019905.1 3221163 3222656 D COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase 3221163..3222656 Pseudomonas putida HB3267 14289298 YP_007229751.1 CDS B479_14570 NC_019905.1 3222794 3224107 D hypothetical protein 3222794..3224107 Pseudomonas putida HB3267 14289299 YP_007229752.1 CDS B479_14575 NC_019905.1 3224247 3225539 R COG0644 Dehydrogenases (flavoproteins); monooxygenase FAD-binding protein complement(3224247..3225539) Pseudomonas putida HB3267 14289300 YP_007229753.1 CDS B479_14580 NC_019905.1 3225532 3226209 R COG1404 Subtilisin-like serine proteases; hypothetical protein complement(3225532..3226209) Pseudomonas putida HB3267 14289301 YP_007229754.1 CDS B479_14585 NC_019905.1 3226199 3227932 R COG1132 ABC-type multidrug transport system, ATPase and permease components; efflux ABC transporter ATP-binding protein complement(3226199..3227932) Pseudomonas putida HB3267 14289302 YP_007229755.1 CDS B479_14590 NC_019905.1 3227934 3229844 R COG3284 Transcriptional activator of acetoin/glycerol metabolism; Fis family GAF modulated sigma54 specific transcriptional regulator complement(3227934..3229844) Pseudomonas putida HB3267 14289303 YP_007229756.1 CDS B479_14595 NC_019905.1 3230066 3230314 R hypothetical protein complement(3230066..3230314) Pseudomonas putida HB3267 14289304 YP_007229757.1 CDS B479_14600 NC_019905.1 3230571 3232673 D COG3501 Uncharacterized protein conserved in bacteria; Rhs element Vgr protein 3230571..3232673 Pseudomonas putida HB3267 14289305 YP_007229758.1 CDS B479_14605 NC_019905.1 3232670 3233245 D hypothetical protein 3232670..3233245 Pseudomonas putida HB3267 14289306 YP_007229759.1 CDS B479_14610 NC_019905.1 3233242 3234084 D hypothetical protein 3233242..3234084 Pseudomonas putida HB3267 14289307 YP_007229760.1 CDS B479_14615 NC_019905.1 3234077 3234676 D hypothetical protein 3234077..3234676 Pseudomonas putida HB3267 14289308 YP_007229761.1 CDS B479_14620 NC_019905.1 3234758 3235957 D hypothetical protein 3234758..3235957 Pseudomonas putida HB3267 14289309 YP_007229762.1 CDS B479_14625 NC_019905.1 3236280 3236888 D hypothetical protein 3236280..3236888 Pseudomonas putida HB3267 14289310 YP_007229763.1 CDS B479_14630 NC_019905.1 3237511 3237825 R COG1462 Uncharacterized protein involved in formation of curli polymers; curli production assembly/transport component CsgG complement(3237511..3237825) Pseudomonas putida HB3267 14289311 YP_007229764.1 CDS B479_14635 NC_019905.1 3237927 3238712 R COG3209 Rhs family protein; hypothetical protein complement(3237927..3238712) Pseudomonas putida HB3267 14289312 YP_007229765.1 CDS B479_14640 NC_019905.1 3238975 3239136 R curli production assembly/transport component CsgG complement(3238975..3239136) Pseudomonas putida HB3267 14289313 YP_007229766.1 CDS B479_14645 NC_019905.1 3239528 3239764 R hypothetical protein complement(3239528..3239764) Pseudomonas putida HB3267 14289314 YP_007229767.1 CDS B479_14650 NC_019905.1 3240359 3241207 R COG1462 Uncharacterized protein involved in formation of curli polymers; curli production assembly/transport component CsgG complement(3240359..3241207) Pseudomonas putida HB3267 14289315 YP_007229768.1 CDS B479_14655 NC_019905.1 3241242 3241655 R curli production assembly/transport component CsgF complement(3241242..3241655) Pseudomonas putida HB3267 14289316 YP_007229769.1 CDS B479_14660 NC_019905.1 3241652 3242053 R curli assembly protein CsgE complement(3241652..3242053) Pseudomonas putida HB3267 14289317 YP_007229770.1 CDS B479_14665 NC_019905.1 3242050 3242577 R hypothetical protein complement(3242050..3242577) Pseudomonas putida HB3267 14289318 YP_007229771.1 CDS B479_14670 NC_019905.1 3242552 3242926 R COG2165 Type II secretory pathway, pseudopilin PulG; type II secretion system protein G complement(3242552..3242926) Pseudomonas putida HB3267 14289319 YP_007229772.1 CDS B479_14675 NC_019905.1 3242932 3243411 R secretion type II protein complement(3242932..3243411) Pseudomonas putida HB3267 14289320 YP_007229773.1 CDS B479_14680 NC_019905.1 3243408 3245273 R COG0457 FOG: TPR repeat; type II and III secretion system protein complement(3243408..3245273) Pseudomonas putida HB3267 14289321 YP_007229774.1 CDS B479_14685 NC_019905.1 3245270 3245518 R hypothetical protein complement(3245270..3245518) Pseudomonas putida HB3267 14289322 YP_007229775.1 CDS B479_14690 NC_019905.1 3245779 3246342 R hypothetical protein complement(3245779..3246342) Pseudomonas putida HB3267 14289323 YP_007229776.1 CDS B479_14695 NC_019905.1 3246329 3246871 R hypothetical protein complement(3246329..3246871) Pseudomonas putida HB3267 14289324 YP_007229777.1 CDS B479_14700 NC_019905.1 3246873 3247664 R hypothetical protein complement(3246873..3247664) Pseudomonas putida HB3267 14289325 YP_007229778.1 CDS B479_14705 NC_019905.1 3247648 3249321 R COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; type II secretion system protein E complement(3247648..3249321) Pseudomonas putida HB3267 14289326 YP_007229779.1 CDS B479_14710 NC_019905.1 3249487 3250017 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; response regulator receiver protein complement(3249487..3250017) Pseudomonas putida HB3267 14289327 YP_007229780.1 CDS B479_14715 NC_019905.1 3250270 3250911 R COG0760 Parvulin-like peptidyl-prolyl isomerase; SurA domain-containing protein complement(3250270..3250911) Pseudomonas putida HB3267 14289328 YP_007229781.1 CDS B479_14720 NC_019905.1 3250924 3252444 R COG2010 Cytochrome c, mono- and diheme variants; cytochrome c complement(3250924..3252444) Pseudomonas putida HB3267 14289329 YP_007229782.1 CDS B479_14725 NC_019905.1 3252668 3253333 R COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems; electron transport protein SCO1/SenC complement(3252668..3253333) Pseudomonas putida HB3267 14289330 YP_007229783.1 CDS B479_14730 NC_019905.1 3253330 3253986 R COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems; electron transport protein SCO1/SenC complement(3253330..3253986) Pseudomonas putida HB3267 14289331 YP_007229784.1 CDS B479_14735 NC_019905.1 3253983 3255959 R COG3391 Uncharacterized conserved protein; hypothetical protein complement(3253983..3255959) Pseudomonas putida HB3267 14289332 YP_007229785.1 CDS B479_14740 NC_019905.1 3255980 3261829 R hypothetical protein complement(3255980..3261829) Pseudomonas putida HB3267 14289333 YP_007229786.1 CDS B479_14745 NC_019905.1 3262648 3262920 D hypothetical protein 3262648..3262920 Pseudomonas putida HB3267 14289334 YP_007229787.1 CDS B479_14750 NC_019905.1 3263147 3263911 R malonate transporter subunit MadM complement(3263147..3263911) Pseudomonas putida HB3267 14289335 YP_007229788.1 CDS B479_14755 NC_019905.1 3263914 3264336 R COG0642 Signal transduction histidine kinase; malonate transporter subunit MadL complement(3263914..3264336) Pseudomonas putida HB3267 14289336 YP_007229789.1 CDS B479_14760 NC_019905.1 3264529 3265449 R COG0331 (acyl-carrier-protein) S-malonyltransferase; malonate decarboxylase subunit epsilon complement(3264529..3265449) Pseudomonas putida HB3267 14289337 YP_007229790.1 CDS B479_14765 NC_019905.1 3265446 3266060 R phosphoribosyl-dephospho-CoA transferase complement(3265446..3266060) Pseudomonas putida HB3267 14289338 YP_007229791.1 CDS B479_14770 NC_019905.1 3266062 3266853 R COG0018 Arginyl-tRNA synthetase; malonate decarboxylase subunit gamma complement(3266062..3266853) Pseudomonas putida HB3267 14289339 YP_007229792.1 CDS B479_14775 NC_019905.1 3266850 3267698 R COG0777 Acetyl-CoA carboxylase beta subunit; malonate decarboxylase subunit beta complement(3266850..3267698) Pseudomonas putida HB3267 14289340 YP_007229793.1 CDS B479_14780 NC_019905.1 3267691 3267990 R malonate decarboxylase subunit delta complement(3267691..3267990) Pseudomonas putida HB3267 14289341 YP_007229794.1 CDS B479_14785 NC_019905.1 3267992 3268843 R COG1767 Triphosphoribosyl-dephospho-CoA synthetase; triphosphoribosyl-dephospho-CoA synthase complement(3267992..3268843) Pseudomonas putida HB3267 14289342 YP_007229795.1 CDS B479_14790 NC_019905.1 3268936 3270597 R COG0488 ATPase components of ABC transporters with duplicated ATPase domains; malonate decarboxylase subunit alpha complement(3268936..3270597) Pseudomonas putida HB3267 14289343 YP_007229796.1 CDS B479_14795 NC_019905.1 3270992 3272062 D COG1024 Enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase/isomerase 3270992..3272062 Pseudomonas putida HB3267 14289344 YP_007229797.1 CDS B479_14800 NC_019905.1 3272079 3273230 D COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase domain-containing protein 3272079..3273230 Pseudomonas putida HB3267 14289345 YP_007229798.1 CDS B479_14805 NC_019905.1 3273393 3274325 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(3273393..3274325) Pseudomonas putida HB3267 14289346 YP_007229799.1 CDS B479_14810 NC_019905.1 3274449 3274712 D COG0371 Glycerol dehydrogenase and related enzymes; hypothetical protein 3274449..3274712 Pseudomonas putida HB3267 14289347 YP_007229800.1 CDS B479_14815 NC_019905.1 3274714 3275406 R COG2384 Predicted SAM-dependent methyltransferase; hypothetical protein complement(3274714..3275406) Pseudomonas putida HB3267 14289348 YP_007229801.1 CDS B479_14820 NC_019905.1 3275543 3275923 D COG0251 Putative translation initiation inhibitor, yjgF family; endoribonuclease L-PSP 3275543..3275923 Pseudomonas putida HB3267 14289349 YP_007229802.1 CDS B479_14825 NC_019905.1 3276139 3278139 D COG0826 Collagenase and related proteases; U32 family peptidase 3276139..3278139 Pseudomonas putida HB3267 14289350 YP_007229803.1 CDS B479_14830 NC_019905.1 3278337 3280040 D COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; amidase 3278337..3280040 Pseudomonas putida HB3267 14289351 YP_007229804.1 CDS B479_14835 NC_019905.1 3280286 3280960 D COG2964 Uncharacterized protein conserved in bacteria; YheO domain-containing protein 3280286..3280960 Pseudomonas putida HB3267 14289352 YP_007229805.1 CDS B479_14840 NC_019905.1 3280957 3281874 D COG1171 Threonine dehydratase; putative L-serine dehydratase 3280957..3281874 Pseudomonas putida HB3267 14289353 YP_007229806.1 CDS B479_14845 NC_019905.1 3282208 3283305 D COG0019 Diaminopimelate decarboxylase; carboxynorspermidine decarboxylase 3282208..3283305 Pseudomonas putida HB3267 14289354 YP_007229807.1 CDS B479_14850 NC_019905.1 3283337 3284581 D COG1748 Saccharopine dehydrogenase and related proteins; saccharopine dehydrogenase 3283337..3284581 Pseudomonas putida HB3267 14289355 YP_007229808.1 CDS B479_14855 NC_019905.1 3284644 3285507 R COG0693 Putative intracellular protease/amidase; ThiJ/PfpI domain-containing protein complement(3284644..3285507) Pseudomonas putida HB3267 14289356 YP_007229809.1 CDS B479_14860 NC_019905.1 3285609 3286562 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 3285609..3286562 Pseudomonas putida HB3267 14289357 YP_007229810.1 CDS B479_14865 NC_019905.1 3286611 3287948 D COG1004 Predicted UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 3286611..3287948 Pseudomonas putida HB3267 14289358 YP_007229811.1 CDS B479_14870 NC_019905.1 3287936 3288046 D COG0451 Nucleoside-diphosphate-sugar epimerases; NAD-dependent epimerase/dehydratase 3287936..3288046 Pseudomonas putida HB3267 14289359 YP_007229812.1 CDS B479_14875 NC_019905.1 3288036 3289613 R COG0579 Predicted dehydrogenase; malate:quinone oxidoreductase complement(3288036..3289613) Pseudomonas putida HB3267 14289360 YP_007229813.1 CDS B479_14880 NC_019905.1 3289758 3290978 D COG4277 Predicted DNA-binding protein with the Helix-hairpin-helix motif; radical SAM domain-containing protein 3289758..3290978 Pseudomonas putida HB3267 14289361 YP_007229814.1 CDS B479_14885 NC_019905.1 3290975 3291811 D hypothetical protein 3290975..3291811 Pseudomonas putida HB3267 14289362 YP_007229815.1 CDS B479_14890 NC_019905.1 3292015 3294081 D COG0366 Glycosidases; trehalose synthase 3292015..3294081 Pseudomonas putida HB3267 14289363 YP_007229816.1 CDS B479_14895 NC_019905.1 3294238 3294864 D COG0307 Riboflavin synthase alpha chain; riboflavin synthase subunit alpha 3294238..3294864 Pseudomonas putida HB3267 14289364 YP_007229817.1 CDS B479_14900 NC_019905.1 3294875 3295576 D COG3619 Predicted membrane protein; hypothetical protein 3294875..3295576 Pseudomonas putida HB3267 14289365 YP_007229818.1 CDS B479_14905 NC_019905.1 3295577 3297079 R COG0477 Permeases of the major facilitator superfamily; proline/glycine betaine transporter complement(3295577..3297079) Pseudomonas putida HB3267 14289366 YP_007229819.1 CDS B479_14910 NC_019905.1 3297239 3298213 R COG0113 Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase complement(3297239..3298213) Pseudomonas putida HB3267 14289367 YP_007229820.1 CDS B479_14915 NC_019905.1 3298494 3299387 R COG1718 Serine/threonine protein kinase involved in cell cycle control; hypothetical protein complement(3298494..3299387) Pseudomonas putida HB3267 14289368 YP_007229821.1 CDS B479_14920 NC_019905.1 3299475 3300812 R COG1113 Gamma-aminobutyrate permease and related permeases; GABA permease complement(3299475..3300812) Pseudomonas putida HB3267 14289369 YP_007229822.1 CDS B479_14925 NC_019905.1 3301018 3302280 R COG0579 Predicted dehydrogenase; hydroxyglutarate oxidase complement(3301018..3302280) Pseudomonas putida HB3267 14289370 YP_007229823.1 CDS B479_14930 NC_019905.1 3302395 3303372 R carbon starvation induced protein complement(3302395..3303372) Pseudomonas putida HB3267 14289371 YP_007229824.1 CDS B479_14935 NC_019905.1 3303568 3304263 D COG1802 Transcriptional regulators; DNA-binding transcriptional regulator CsiR 3303568..3304263 Pseudomonas putida HB3267 14289372 YP_007229825.1 CDS B479_14940 NC_019905.1 3304475 3305155 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component transcriptional regulator 3304475..3305155 Pseudomonas putida HB3267 14289373 YP_007229826.1 CDS B479_14945 NC_019905.1 3305133 3306524 D COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 3305133..3306524 Pseudomonas putida HB3267 14289374 YP_007229827.1 CDS cysS NC_019905.1 3306659 3308041 R COG0215 Cysteinyl-tRNA synthetase; cysteinyl-tRNA ligase complement(3306659..3308041) Pseudomonas putida HB3267 14289375 YP_007229828.1 CDS B479_14955 NC_019905.1 3308051 3309754 R COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutaminyl-tRNA ligase complement(3308051..3309754) Pseudomonas putida HB3267 14289376 YP_007229829.1 CDS B479_14960 NC_019905.1 3310002 3310502 D COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; cyclophilin type peptidyl-prolyl cis-trans isomerase 3310002..3310502 Pseudomonas putida HB3267 14289377 YP_007229830.1 CDS B479_14965 NC_019905.1 3310499 3311221 D COG2908 Uncharacterized protein conserved in bacteria; UDP-2,3-diacylglucosamine hydrolase 3310499..3311221 Pseudomonas putida HB3267 14289378 YP_007229831.1 CDS B479_14970 NC_019905.1 3311335 3313626 R COG2366 Protein related to penicillin acylase; penicillin amidase family protein complement(3311335..3313626) Pseudomonas putida HB3267 14289379 YP_007229832.1 CDS B479_14975 NC_019905.1 3313842 3314216 D COG0735 Fe2+/Zn2+ uptake regulation proteins; hypothetical protein 3313842..3314216 Pseudomonas putida HB3267 14289380 YP_007229833.1 CDS B479_14980 NC_019905.1 3314253 3314441 R hypothetical protein complement(3314253..3314441) Pseudomonas putida HB3267 14289381 YP_007229834.1 CDS B479_14985 NC_019905.1 3314593 3315051 D hypothetical protein 3314593..3315051 Pseudomonas putida HB3267 14289382 YP_007229835.1 CDS B479_14990 NC_019905.1 3315303 3315683 D hypothetical protein 3315303..3315683 Pseudomonas putida HB3267 14289383 YP_007229836.1 CDS B479_14995 NC_019905.1 3315748 3316407 D hypothetical protein 3315748..3316407 Pseudomonas putida HB3267 14289384 YP_007229837.1 CDS B479_15000 NC_019905.1 3316504 3317037 D hypothetical protein 3316504..3317037 Pseudomonas putida HB3267 14289385 YP_007229838.1 CDS B479_15005 NC_019905.1 3317056 3320730 R COG2911 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3317056..3320730) Pseudomonas putida HB3267 14289386 YP_007229839.1 CDS B479_15010 NC_019905.1 3320727 3322469 R COG0729 Outer membrane protein; surface antigen (D15) complement(3320727..3322469) Pseudomonas putida HB3267 14289387 YP_007229840.1 CDS B479_15015 NC_019905.1 3322522 3323172 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; acetyltransferase complement(3322522..3323172) Pseudomonas putida HB3267 14289388 YP_007229841.1 CDS B479_15020 NC_019905.1 3323306 3324118 D COG0708 Exonuclease III; exonuclease III 3323306..3324118 Pseudomonas putida HB3267 14289389 YP_007229842.1 CDS B479_15025 NC_019905.1 3324218 3324901 R COG1309 Transcriptional regulator; TetR family transcriptional regulator complement(3324218..3324901) Pseudomonas putida HB3267 14289390 YP_007229843.1 CDS B479_15030 NC_019905.1 3325206 3326186 D COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components; aliphatic sulfonates ABC transporter substrate-binding protein 3325206..3326186 Pseudomonas putida HB3267 14289391 YP_007229844.1 CDS B479_15035 NC_019905.1 3326203 3327594 D COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; monooxygenase 3326203..3327594 Pseudomonas putida HB3267 14289392 YP_007229845.1 CDS B479_15040 NC_019905.1 3327701 3328537 D COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization; hypothetical protein 3327701..3328537 Pseudomonas putida HB3267 14289393 YP_007229846.1 CDS B479_15045 NC_019905.1 3328698 3329297 D lipid-binding START domain-containing protein 3328698..3329297 Pseudomonas putida HB3267 14289394 YP_007229847.1 CDS B479_15050 NC_019905.1 3329432 3330313 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(3329432..3330313) Pseudomonas putida HB3267 14289395 YP_007229848.1 CDS B479_15055 NC_019905.1 3330385 3332175 R COG0405 Gamma-glutamyltransferase; gamma-glutamyltransferase complement(3330385..3332175) Pseudomonas putida HB3267 14289396 YP_007229849.1 CDS B479_15060 NC_019905.1 3332293 3332943 D COG0666 FOG: Ankyrin repeat; ankyrin 3332293..3332943 Pseudomonas putida HB3267 14289397 YP_007229850.1 CDS B479_15065 NC_019905.1 3333083 3334270 R COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; 4-hydroxybenzoate 3-monooxygenase complement(3333083..3334270) Pseudomonas putida HB3267 14289398 YP_007229851.1 CDS B479_15070 NC_019905.1 3334443 3335321 D COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator 3334443..3335321 Pseudomonas putida HB3267 14289399 YP_007229852.1 CDS B479_15075 NC_019905.1 3335521 3335919 D COG0789 Predicted transcriptional regulators; MerR family transcriptional regulator 3335521..3335919 Pseudomonas putida HB3267 14289400 YP_007229853.1 CDS B479_15080 NC_019905.1 3335939 3336838 D COG0119 Isopropylmalate/homocitrate/citramalate synthases; hydroxymethylglutaryl-CoA lyase 3335939..3336838 Pseudomonas putida HB3267 14289401 YP_007229854.1 CDS B479_15085 NC_019905.1 3337371 3337889 R COG1285 Uncharacterized membrane protein; MgtC/SapB transporter complement(3337371..3337889) Pseudomonas putida HB3267 14289402 YP_007229855.1 CDS B479_15090 NC_019905.1 3338126 3338365 D hypothetical protein 3338126..3338365 Pseudomonas putida HB3267 14289403 YP_007229856.1 CDS B479_15095 NC_019905.1 3338487 3339890 D COG0348 Polyferredoxin; cytochrome c oxidase accessory protein CcoG 3338487..3339890 Pseudomonas putida HB3267 14289404 YP_007229857.1 CDS B479_15100 NC_019905.1 3339941 3341350 D COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; GntR family transcriptional regulator 3339941..3341350 Pseudomonas putida HB3267 14289405 YP_007229858.1 CDS B479_15105 NC_019905.1 3341432 3343063 D COG0642 Signal transduction histidine kinase; PAS/PAC sensor hybrid histidine kinase 3341432..3343063 Pseudomonas putida HB3267 14289406 YP_007229859.1 CDS B479_15110 NC_019905.1 3343127 3344821 D COG2202 FOG: PAS/PAC domain; PAS/PAC sensor hybrid histidine kinase 3343127..3344821 Pseudomonas putida HB3267 14289407 YP_007229860.1 CDS B479_15115 NC_019905.1 3344831 3345577 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain dehydrogenase/reductase SDR complement(3344831..3345577) Pseudomonas putida HB3267 14289408 YP_007229861.1 CDS B479_15120 NC_019905.1 3345654 3346667 R COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; putative ApbE-like lipoprotein complement(3345654..3346667) Pseudomonas putida HB3267 14289409 YP_007229862.1 CDS B479_15125 NC_019905.1 3346921 3348321 D COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC; electron transport complex protein RnfC 3346921..3348321 Pseudomonas putida HB3267 14289410 YP_007229863.1 CDS B479_15130 NC_019905.1 3348318 3349268 D COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD; RnfABCDGE type electron transport complex subunit D 3348318..3349268 Pseudomonas putida HB3267 14289411 YP_007229864.1 CDS B479_15135 NC_019905.1 3349311 3350846 R COG0477 Permeases of the major facilitator superfamily; EmrB/QacA family drug resistance transporter complement(3349311..3350846) Pseudomonas putida HB3267 14289412 YP_007229865.1 CDS B479_15140 NC_019905.1 3350843 3352036 R COG1566 Multidrug resistance efflux pump; secretion protein HlyD family protein complement(3350843..3352036) Pseudomonas putida HB3267 14289413 YP_007229866.1 CDS B479_15145 NC_019905.1 3352067 3352540 R COG1846 Transcriptional regulators; MarR family transcriptional regulator complement(3352067..3352540) Pseudomonas putida HB3267 14289414 YP_007229867.1 CDS B479_15150 NC_019905.1 3352784 3353419 R COG4566 Response regulator; LuxR family DNA-binding response regulator complement(3352784..3353419) Pseudomonas putida HB3267 14289415 YP_007229868.1 CDS B479_15155 NC_019905.1 3353426 3354832 R COG2202 FOG: PAS/PAC domain; PAS/PAC sensor signal transduction histidine kinase complement(3353426..3354832) Pseudomonas putida HB3267 14289416 YP_007229869.1 CDS B479_15160 NC_019905.1 3355027 3356649 D COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; acyl-CoA synthetase 3355027..3356649 Pseudomonas putida HB3267 14289417 YP_007229870.1 CDS B479_15165 NC_019905.1 3356723 3358492 D COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase domain-containing protein 3356723..3358492 Pseudomonas putida HB3267 14289418 YP_007229871.1 CDS B479_15170 NC_019905.1 3358761 3359768 D COG3712 Fe2+-dicitrate sensor, membrane component; anti-FecI sigma factor FecR 3358761..3359768 Pseudomonas putida HB3267 14289419 YP_007229872.1 CDS B479_15175 NC_019905.1 3359782 3361101 R COG2056 Predicted permease; Na+/H+ antiporter NhaC complement(3359782..3361101) Pseudomonas putida HB3267 14289420 YP_007229873.1 CDS B479_15180 NC_019905.1 3361360 3363504 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3361360..3363504 Pseudomonas putida HB3267 14289421 YP_007229874.1 CDS B479_15185 NC_019905.1 3363610 3364626 D COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components; glycine betaine ABC transporter substrate-binding protein 3363610..3364626 Pseudomonas putida HB3267 14289422 YP_007229875.1 CDS B479_15190 NC_019905.1 3364623 3365471 D COG4176 ABC-type proline/glycine betaine transport system, permease component; binding-protein-dependent transport system inner membrane protein 3364623..3365471 Pseudomonas putida HB3267 14289423 YP_007229876.1 CDS B479_15195 NC_019905.1 3365580 3366443 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 3365580..3366443 Pseudomonas putida HB3267 14289424 YP_007229877.1 CDS B479_15200 NC_019905.1 3366695 3367612 D COG0679 Predicted permeases; auxin efflux carrier 3366695..3367612 Pseudomonas putida HB3267 14289425 YP_007229878.1 CDS B479_15205 NC_019905.1 3367648 3368259 D COG3773 Cell wall hydrolyses involved in spore germination; cell wall hydrolase SleB 3367648..3368259 Pseudomonas putida HB3267 14289426 YP_007229879.1 CDS B479_15210 NC_019905.1 3368479 3369330 D COG2340 Uncharacterized protein with SCP/PR1 domains; hypothetical protein 3368479..3369330 Pseudomonas putida HB3267 14289427 YP_007229880.1 CDS B479_15215 NC_019905.1 3369482 3370456 R COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; AraC family transcriptional regulator complement(3369482..3370456) Pseudomonas putida HB3267 14289428 YP_007229881.1 CDS B479_15220 NC_019905.1 3370563 3371174 D COG1280 Putative threonine efflux protein; lysine exporter protein LysE/YggA 3370563..3371174 Pseudomonas putida HB3267 14289429 YP_007229882.1 CDS B479_15225 NC_019905.1 3371345 3372544 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(3371345..3372544) Pseudomonas putida HB3267 14289430 YP_007229883.1 CDS B479_15230 NC_019905.1 3372650 3373555 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(3372650..3373555) Pseudomonas putida HB3267 14289431 YP_007229884.1 CDS B479_15235 NC_019905.1 3373673 3374023 D cupin 3373673..3374023 Pseudomonas putida HB3267 14289432 YP_007229885.1 CDS B479_15240 NC_019905.1 3374358 3376775 D COG4993 Glucose dehydrogenase; pyrroloquinoline quinone 3374358..3376775 Pseudomonas putida HB3267 14289433 YP_007229886.1 CDS B479_15245 NC_019905.1 3376902 3378170 D COG3659 Carbohydrate-selective porin; carbohydrate-selective porin OprB 3376902..3378170 Pseudomonas putida HB3267 14289434 YP_007229887.1 CDS B479_15250 NC_019905.1 3378495 3379655 R COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; acetylornithine deacetylase complement(3378495..3379655) Pseudomonas putida HB3267 14289435 YP_007229888.1 CDS B479_15255 NC_019905.1 3379648 3380325 R COG3342 Uncharacterized conserved protein; hypothetical protein complement(3379648..3380325) Pseudomonas putida HB3267 14289436 YP_007229889.1 CDS B479_15260 NC_019905.1 3380697 3382016 D COG2072 Predicted flavoprotein involved in K+ transport; putative monooxygenase 3380697..3382016 Pseudomonas putida HB3267 14289437 YP_007229890.1 CDS B479_15265 NC_019905.1 3382016 3382432 D COG0251 Putative translation initiation inhibitor, yjgF family; endoribonuclease L-PSP 3382016..3382432 Pseudomonas putida HB3267 14289438 YP_007229891.1 CDS B479_15270 NC_019905.1 3382533 3384938 R COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent siderophore receptor complement(3382533..3384938) Pseudomonas putida HB3267 14289439 YP_007229892.1 CDS B479_15275 NC_019905.1 3385005 3385949 R COG3712 Fe2+-dicitrate sensor, membrane component; anti-FecI sigma factor FecR complement(3385005..3385949) Pseudomonas putida HB3267 14289440 YP_007229893.1 CDS B479_15280 NC_019905.1 3385946 3386458 R COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; ECF subfamily RNA polymerase sigma-24 factor complement(3385946..3386458) Pseudomonas putida HB3267 14289441 YP_007229894.1 CDS B479_15285 NC_019905.1 3386537 3388174 R COG0033 Phosphoglucomutase; phosphoglucomutase complement(3386537..3388174) Pseudomonas putida HB3267 14289442 YP_007229895.1 CDS B479_15290 NC_019905.1 3388476 3389123 D COG4291 Predicted membrane protein; hypothetical protein 3388476..3389123 Pseudomonas putida HB3267 14289443 YP_007229896.1 CDS B479_15295 NC_019905.1 3389398 3389658 D hypothetical protein 3389398..3389658 Pseudomonas putida HB3267 14289444 YP_007229897.1 CDS B479_15300 NC_019905.1 3389655 3391745 R COG3300 MHYT domain (predicted integral membrane sensor domain); diguanylate cyclase/phosphodiesterase complement(3389655..3391745) Pseudomonas putida HB3267 14289445 YP_007229898.1 CDS B479_15305 NC_019905.1 3392015 3393502 R COG1538 Outer membrane protein; RND efflux system outer membrane lipoprotein complement(3392015..3393502) Pseudomonas putida HB3267 14289446 YP_007229899.1 CDS B479_15310 NC_019905.1 3393499 3396606 R COG0841 Cation/multidrug efflux pump; acriflavin resistance protein complement(3393499..3396606) Pseudomonas putida HB3267 14289447 YP_007229900.1 CDS B479_15315 NC_019905.1 3396603 3399701 R COG0841 Cation/multidrug efflux pump; acriflavin resistance protein complement(3396603..3399701) Pseudomonas putida HB3267 14289448 YP_007229901.1 CDS B479_15320 NC_019905.1 3399698 3401020 R COG0845 Membrane-fusion protein; RND family efflux transporter, MFP subunit complement(3399698..3401020) Pseudomonas putida HB3267 14289449 YP_007229902.1 CDS B479_15325 NC_019905.1 3401484 3401984 R COG2077 Peroxiredoxin; redoxin domain-containing protein complement(3401484..3401984) Pseudomonas putida HB3267 14289450 YP_007229903.1 CDS B479_15330 NC_019905.1 3402149 3403429 R COG0814 Amino acid permeases; aromatic amino acid permease complement(3402149..3403429) Pseudomonas putida HB3267 14289451 YP_007229904.1 CDS B479_15335 NC_019905.1 3403776 3404972 R COG1448 Aspartate/tyrosine/aromatic aminotransferase; aromatic amino acid aminotransferase complement(3403776..3404972) Pseudomonas putida HB3267 14289452 YP_007229905.1 CDS B479_15340 NC_019905.1 3405198 3406223 R COG2055 Malate/L-lactate dehydrogenases; malate/L-lactate dehydrogenase complement(3405198..3406223) Pseudomonas putida HB3267 14289453 YP_007229906.1 CDS B479_15345 NC_019905.1 3406367 3407239 D COG1737 Transcriptional regulators; RpiR family transcriptional regulator 3406367..3407239 Pseudomonas putida HB3267 14289454 YP_007229907.1 CDS B479_15350 NC_019905.1 3407262 3408014 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter periplasmic binding protein 3407262..3408014 Pseudomonas putida HB3267 14289455 YP_007229908.1 CDS B479_15355 NC_019905.1 3408186 3408905 D COG4215 ABC-type arginine transport system, permease component; polar amino acid ABC transporter inner membrane subunit 3408186..3408905 Pseudomonas putida HB3267 14289456 YP_007229909.1 CDS B479_15360 NC_019905.1 3408902 3409612 D COG4160 ABC-type arginine/histidine transport system, permease component; polar amino acid ABC transporter inner membrane subunit 3408902..3409612 Pseudomonas putida HB3267 14289457 YP_007229910.1 CDS B479_15365 NC_019905.1 3409629 3410873 D COG0665 Glycine/D-amino acid oxidases (deaminating); FAD dependent oxidoreductase 3409629..3410873 Pseudomonas putida HB3267 14289458 YP_007229911.1 CDS B479_15370 NC_019905.1 3410896 3411678 D COG1126 ABC-type polar amino acid transport system, ATPase component; amino acid ABC transporter ATP-binding protein 3410896..3411678 Pseudomonas putida HB3267 14289459 YP_007229912.1 CDS B479_15375 NC_019905.1 3412169 3412978 D COG2071 Predicted glutamine amidotransferases; peptidase C26 3412169..3412978 Pseudomonas putida HB3267 14289460 YP_007229913.1 CDS B479_15380 NC_019905.1 3413407 3414318 D COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; 5-dehydro-4-deoxyglucarate dehydratase 3413407..3414318 Pseudomonas putida HB3267 14289461 YP_007229914.1 CDS B479_15385 NC_019905.1 3414423 3415784 D COG0477 Permeases of the major facilitator superfamily; D-galactonate transporter 3414423..3415784 Pseudomonas putida HB3267 14289462 YP_007229915.1 CDS garD NC_019905.1 3415861 3417414 D COG2721 Altronate dehydratase; galactarate dehydrogenase 3415861..3417414 Pseudomonas putida HB3267 14289463 YP_007229916.1 CDS B479_15395 NC_019905.1 3417580 3419160 D COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase 3417580..3419160 Pseudomonas putida HB3267 14289464 YP_007229917.1 CDS B479_15400 NC_019905.1 3419330 3420079 R COG2186 Transcriptional regulators; GntR family transcriptional regulator complement(3419330..3420079) Pseudomonas putida HB3267 14289465 YP_007229918.1 CDS B479_15405 NC_019905.1 3420293 3420568 D hypothetical protein 3420293..3420568 Pseudomonas putida HB3267 14289466 YP_007229919.1 CDS B479_15410 NC_019905.1 3420664 3420972 D hypothetical protein 3420664..3420972 Pseudomonas putida HB3267 14289467 YP_007229920.1 CDS B479_15415 NC_019905.1 3421234 3422142 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 3421234..3422142 Pseudomonas putida HB3267 14289468 YP_007229921.1 CDS B479_15420 NC_019905.1 3422143 3422661 R COG3238 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3422143..3422661) Pseudomonas putida HB3267 14289469 YP_007229922.1 CDS B479_15425 NC_019905.1 3422866 3423630 D COG4335 DNA alkylation repair enzyme; hypothetical protein 3422866..3423630 Pseudomonas putida HB3267 14289470 YP_007229923.1 CDS B479_15430 NC_019905.1 3423635 3424216 R hypothetical protein complement(3423635..3424216) Pseudomonas putida HB3267 14289471 YP_007229924.1 CDS B479_15435 NC_019905.1 3424445 3426574 D COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent siderophore receptor 3424445..3426574 Pseudomonas putida HB3267 14289472 YP_007229925.1 CDS B479_15440 NC_019905.1 3426795 3427094 D hypothetical protein 3426795..3427094 Pseudomonas putida HB3267 14289473 YP_007229926.1 CDS B479_15445 NC_019905.1 3427112 3427924 R COG0500 SAM-dependent methyltransferases; type 11 methyltransferase complement(3427112..3427924) Pseudomonas putida HB3267 14289474 YP_007229927.1 CDS B479_15450 NC_019905.1 3428206 3430392 R COG1765 Predicted redox protein, regulator of disulfide bond formation; hypothetical protein complement(3428206..3430392) Pseudomonas putida HB3267 14289475 YP_007229928.1 CDS B479_15455 NC_019905.1 3430782 3431237 D COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; 2Fe-2S iron-sulfur cluster binding domain-containing protein 3430782..3431237 Pseudomonas putida HB3267 14289476 YP_007229929.1 CDS B479_15460 NC_019905.1 3431237 3433486 D COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 3431237..3433486 Pseudomonas putida HB3267 14289477 YP_007229930.1 CDS B479_15465 NC_019905.1 3433504 3434847 D COG2010 Cytochrome c, mono- and diheme variants; gluconate 2-dehydrogenase 3433504..3434847 Pseudomonas putida HB3267 14289478 YP_007229931.1 CDS B479_15470 NC_019905.1 3434874 3435893 D COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; hypothetical protein 3434874..3435893 Pseudomonas putida HB3267 14289479 YP_007229932.1 CDS B479_15475 NC_019905.1 3436023 3436811 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; extracellular solute-binding protein complement(3436023..3436811) Pseudomonas putida HB3267 14289480 YP_007229933.1 CDS B479_15480 NC_019905.1 3436978 3437619 R COG1280 Putative threonine efflux protein; lysine exporter protein LysE/YggA complement(3436978..3437619) Pseudomonas putida HB3267 14289481 YP_007229934.1 CDS B479_15485 NC_019905.1 3437670 3437870 R COG3313 Predicted Fe-S protein; hypothetical protein complement(3437670..3437870) Pseudomonas putida HB3267 14289482 YP_007229935.1 CDS B479_15490 NC_019905.1 3437879 3438196 R hypothetical protein complement(3437879..3438196) Pseudomonas putida HB3267 14289483 YP_007229936.1 CDS B479_15495 NC_019905.1 3438513 3440261 D COG1292 Choline-glycine betaine transporter; choline/carnitine/betaine transporter 3438513..3440261 Pseudomonas putida HB3267 14289484 YP_007229937.1 CDS B479_15500 NC_019905.1 3440328 3440807 R COG3865 Uncharacterized protein conserved in bacteria; 3-demethylubiquinone-9 3-methyltransferase complement(3440328..3440807) Pseudomonas putida HB3267 14289485 YP_007229938.1 CDS B479_15505 NC_019905.1 3441014 3441664 D COG3103 SH3 domain protein; SH3 type 3 domain-containing protein 3441014..3441664 Pseudomonas putida HB3267 14289486 YP_007229939.1 CDS B479_15510 NC_019905.1 3441783 3442055 R hypothetical protein complement(3441783..3442055) Pseudomonas putida HB3267 14289487 YP_007229940.1 CDS B479_15515 NC_019905.1 3442162 3443070 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(3442162..3443070) Pseudomonas putida HB3267 14289488 YP_007229941.1 CDS B479_15520 NC_019905.1 3443195 3443929 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain dehydrogenase/reductase SDR 3443195..3443929 Pseudomonas putida HB3267 14289489 YP_007229942.1 CDS B479_15525 NC_019905.1 3443947 3444153 D COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog; 4-oxalocrotonate tautomerase 3443947..3444153 Pseudomonas putida HB3267 14289490 YP_007229943.1 CDS B479_15530 NC_019905.1 3444271 3445152 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(3444271..3445152) Pseudomonas putida HB3267 14289491 YP_007229944.1 CDS B479_15535 NC_019905.1 3445261 3446202 D COG0002 Acetylglutamate semialdehyde dehydrogenase; N-acetyl-gamma-glutamyl-phosphate reductase 3445261..3446202 Pseudomonas putida HB3267 14289492 YP_007229945.1 CDS B479_15540 NC_019905.1 3446282 3446968 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; acetyltransferase 3446282..3446968 Pseudomonas putida HB3267 14289493 YP_007229946.1 CDS B479_15545 NC_019905.1 3447066 3447821 R COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; binding-protein-dependent transport system inner membrane protein complement(3447066..3447821) Pseudomonas putida HB3267 14289494 YP_007229947.1 CDS B479_15550 NC_019905.1 3447821 3449026 R COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components; putative sulfonate ABC transporter periplasmic sulfonate-binding protein complement(3447821..3449026) Pseudomonas putida HB3267 14289495 YP_007229948.1 CDS B479_15555 NC_019905.1 3449013 3449834 R COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; sulfonate ABC transporter ATP-binding protein complement(3449013..3449834) Pseudomonas putida HB3267 14289496 YP_007229949.1 CDS B479_15560 NC_019905.1 3449831 3450895 R COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase complement(3449831..3450895) Pseudomonas putida HB3267 14289497 YP_007229950.1 CDS B479_15565 NC_019905.1 3450995 3451555 R COG2128 Uncharacterized conserved protein; alkylhydroperoxidase complement(3450995..3451555) Pseudomonas putida HB3267 14289498 YP_007229951.1 CDS B479_15570 NC_019905.1 3451658 3452569 D COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator 3451658..3452569 Pseudomonas putida HB3267 14289499 YP_007229952.1 CDS B479_15575 NC_019905.1 3452723 3454129 R COG1457 Purine-cytosine permease and related proteins; cytosine/purines uracil thiamine allantoin permease complement(3452723..3454129) Pseudomonas putida HB3267 14289500 YP_007229953.1 CDS B479_15580 NC_019905.1 3454447 3454932 D COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family; flavin reductase domain-containing protein 3454447..3454932 Pseudomonas putida HB3267 14289501 YP_007229954.1 CDS B479_15585 NC_019905.1 3455008 3456048 D COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; luciferase family protein 3455008..3456048 Pseudomonas putida HB3267 14289502 YP_007229955.1 CDS B479_15590 NC_019905.1 3456371 3456967 D hypothetical protein 3456371..3456967 Pseudomonas putida HB3267 14289503 YP_007229956.1 CDS B479_15595 NC_019905.1 3457036 3457869 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold protein 3457036..3457869 Pseudomonas putida HB3267 14289504 YP_007229957.1 CDS B479_15600 NC_019905.1 3457866 3459347 D COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase 3457866..3459347 Pseudomonas putida HB3267 14289505 YP_007229958.1 CDS B479_15605 NC_019905.1 3459361 3459846 D COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family; flavin reductase domain-containing protein 3459361..3459846 Pseudomonas putida HB3267 14289506 YP_007229959.1 CDS B479_15610 NC_019905.1 3460056 3460445 D COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit; carboxymuconolactone decarboxylase 3460056..3460445 Pseudomonas putida HB3267 14289507 YP_007229960.1 CDS B479_15615 NC_019905.1 3460536 3461282 D COG1802 Transcriptional regulators; GntR family transcriptional regulator 3460536..3461282 Pseudomonas putida HB3267 14289508 YP_007229961.1 CDS B479_15620 NC_019905.1 3461304 3461867 D COG1051 ADP-ribose pyrophosphatase; NUDIX hydrolase 3461304..3461867 Pseudomonas putida HB3267 14289509 YP_007229962.1 CDS B479_15625 NC_019905.1 3462050 3463831 D COG2202 FOG: PAS/PAC domain; GAF sensor hybrid histidine kinase 3462050..3463831 Pseudomonas putida HB3267 14289510 YP_007229963.1 CDS B479_15630 NC_019905.1 3463835 3464467 R COG1280 Putative threonine efflux protein; lysine exporter protein LysE/YggA complement(3463835..3464467) Pseudomonas putida HB3267 14289511 YP_007229964.1 CDS B479_15635 NC_019905.1 3464598 3465212 R COG1280 Putative threonine efflux protein; lysine exporter protein LysE/YggA complement(3464598..3465212) Pseudomonas putida HB3267 14289512 YP_007229965.1 CDS B479_15640 NC_019905.1 3465325 3465777 D COG1522 Transcriptional regulators; AsnC family transcriptional regulator 3465325..3465777 Pseudomonas putida HB3267 14289513 YP_007229966.1 CDS B479_15645 NC_019905.1 3466192 3467604 D COG1457 Purine-cytosine permease and related proteins; cytosine/purines uracil thiamine allantoin permease 3466192..3467604 Pseudomonas putida HB3267 14289514 YP_007229967.1 CDS B479_15650 NC_019905.1 3467732 3469036 R COG0004 Ammonia permease; ammonium transporter complement(3467732..3469036) Pseudomonas putida HB3267 14289515 YP_007229968.1 CDS B479_15655 NC_019905.1 3469203 3470528 R COG0069 Glutamate synthase domain 2; ferredoxin-dependent glutamate synthase complement(3469203..3470528) Pseudomonas putida HB3267 14289516 YP_007229969.1 CDS B479_15660 NC_019905.1 3470544 3471218 R COG0070 Glutamate synthase domain 3; glutamate synthase subunit alpha complement(3470544..3471218) Pseudomonas putida HB3267 14289517 YP_007229970.1 CDS B479_15665 NC_019905.1 3471246 3472151 R COG0067 Glutamate synthase domain 1; glutamine amidotransferase complement(3471246..3472151) Pseudomonas putida HB3267 14289518 YP_007229971.1 CDS B479_15670 NC_019905.1 3472218 3473552 R COG0174 Glutamine synthetase; glutamine synthetase complement(3472218..3473552) Pseudomonas putida HB3267 14289519 YP_007229972.1 CDS B479_15675 NC_019905.1 3473899 3474492 D COG1396 Predicted transcriptional regulators; XRE family transcriptional regulator 3473899..3474492 Pseudomonas putida HB3267 14289520 YP_007229973.1 CDS B479_15680 NC_019905.1 3474556 3475260 R COG1051 ADP-ribose pyrophosphatase; NUDIX hydrolase complement(3474556..3475260) Pseudomonas putida HB3267 14289521 YP_007229974.1 CDS B479_15685 NC_019905.1 3475398 3476048 D COG1335 Amidases related to nicotinamidase; nicotinamidase 3475398..3476048 Pseudomonas putida HB3267 14289522 YP_007229975.1 CDS B479_15690 NC_019905.1 3476045 3477244 D COG1488 Nicotinic acid phosphoribosyltransferase; nicotinate phosphoribosyltransferase 3476045..3477244 Pseudomonas putida HB3267 14289523 YP_007229976.1 CDS B479_15695 NC_019905.1 3477256 3478143 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(3477256..3478143) Pseudomonas putida HB3267 14289524 YP_007229977.1 CDS B479_15700 NC_019905.1 3478255 3479316 D COG2855 Predicted membrane protein; hypothetical protein 3478255..3479316 Pseudomonas putida HB3267 14289525 YP_007229978.1 CDS B479_15705 NC_019905.1 3479529 3480902 D COG1611 Predicted Rossmann fold nucleotide-binding protein; decarboxylase family protein 3479529..3480902 Pseudomonas putida HB3267 14289526 YP_007229979.1 CDS B479_15710 NC_019905.1 3481123 3482265 R COG2199 FOG: GGDEF domain; diguanylate cyclase complement(3481123..3482265) Pseudomonas putida HB3267 14289527 YP_007229980.1 CDS B479_15715 NC_019905.1 3482432 3482614 R hypothetical protein complement(3482432..3482614) Pseudomonas putida HB3267 14289528 YP_007229981.1 CDS B479_15720 NC_019905.1 3482601 3482921 D hypothetical protein 3482601..3482921 Pseudomonas putida HB3267 14289529 YP_007229982.1 CDS B479_15725 NC_019905.1 3483180 3484139 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein 3483180..3484139 Pseudomonas putida HB3267 14289530 YP_007229983.1 CDS pssA NC_019905.1 3484475 3485803 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phosphatidylserine synthase complement(3484475..3485803) Pseudomonas putida HB3267 14289531 YP_007229984.1 CDS B479_15735 NC_019905.1 3486020 3488266 R COG0376 Catalase (peroxidase I); catalase/hydroperoxidase HPI(I) complement(3486020..3488266) Pseudomonas putida HB3267 14289532 YP_007229985.1 CDS B479_15740 NC_019905.1 3488629 3489534 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 3488629..3489534 Pseudomonas putida HB3267 14289533 YP_007229986.1 CDS B479_15745 NC_019905.1 3489633 3490229 D hypothetical protein 3489633..3490229 Pseudomonas putida HB3267 14289534 YP_007229987.1 CDS B479_15750 NC_019905.1 3490407 3491285 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein complement(3490407..3491285) Pseudomonas putida HB3267 14289535 YP_007229988.1 CDS B479_15755 NC_019905.1 3491533 3492357 D COG0656 Aldo/keto reductases, related to diketogulonate reductase; aldo/keto reductase 3491533..3492357 Pseudomonas putida HB3267 14289536 YP_007229989.1 CDS B479_15760 NC_019905.1 3492494 3494563 R COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(3492494..3494563) Pseudomonas putida HB3267 14289537 YP_007229990.1 CDS B479_15765 NC_019905.1 3494719 3495213 R COG5628 Predicted acetyltransferase; hypothetical protein complement(3494719..3495213) Pseudomonas putida HB3267 14289538 YP_007229991.1 CDS B479_15780 NC_019905.1 3495873 3496163 R COG4829 Muconolactone delta-isomerase; muconolactone delta-isomerase complement(3495873..3496163) Pseudomonas putida HB3267 14289539 YP_007229992.1 CDS B479_15785 NC_019905.1 3496212 3497339 R COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; muconate and chloromuconate cycloisomerase complement(3496212..3497339) Pseudomonas putida HB3267 14289540 YP_007229993.1 CDS B479_15790 NC_019905.1 3497475 3498353 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 3497475..3498353 Pseudomonas putida HB3267 14289541 YP_007229994.1 CDS B479_15795 NC_019905.1 3498350 3499684 D COG3048 D-serine dehydratase; D-serine dehydratase 3498350..3499684 Pseudomonas putida HB3267 14289542 YP_007229995.1 CDS B479_15800 NC_019905.1 3499850 3500683 R COG2771 DNA-binding HTH domain-containing proteins; LuxR family transcriptional regulator complement(3499850..3500683) Pseudomonas putida HB3267 14289543 YP_007229996.1 CDS B479_15805 NC_019905.1 3500737 3502149 R COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; hypothetical protein complement(3500737..3502149) Pseudomonas putida HB3267 14289544 YP_007229997.1 CDS B479_15810 NC_019905.1 3502184 3503287 R COG0687 Spermidine/putrescine-binding periplasmic protein; extracellular solute-binding protein complement(3502184..3503287) Pseudomonas putida HB3267 14289545 YP_007229998.1 CDS B479_15815 NC_019905.1 3503725 3504426 R COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); ribosyldihydronicotinamide dehydrogenase complement(3503725..3504426) Pseudomonas putida HB3267 14289546 YP_007229999.1 CDS B479_15820 NC_019905.1 3504470 3505885 R COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase complement(3504470..3505885) Pseudomonas putida HB3267 14289547 YP_007230000.1 CDS B479_15825 NC_019905.1 3505878 3507068 R COG0436 Aspartate/tyrosine/aromatic aminotransferase; aspartate aminotransferase complement(3505878..3507068) Pseudomonas putida HB3267 14289548 YP_007230001.1 CDS B479_15830 NC_019905.1 3507092 3508321 R COG0787 Alanine racemase; alanine racemase complement(3507092..3508321) Pseudomonas putida HB3267 14289549 YP_007230002.1 CDS B479_15835 NC_019905.1 3508356 3509963 R COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; hypothetical protein complement(3508356..3509963) Pseudomonas putida HB3267 14289550 YP_007230003.1 CDS B479_15840 NC_019905.1 3509956 3512073 R COG1042 Acyl-CoA synthetase (NDP forming); putative acyl-CoA synthetase complement(3509956..3512073) Pseudomonas putida HB3267 14289551 YP_007230004.1 CDS B479_15845 NC_019905.1 3512091 3513251 R COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase domain-containing protein complement(3512091..3513251) Pseudomonas putida HB3267 14289552 YP_007230005.1 CDS B479_15850 NC_019905.1 3513285 3514079 R COG1024 Enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase/isomerase complement(3513285..3514079) Pseudomonas putida HB3267 14289553 YP_007230006.1 CDS B479_15855 NC_019905.1 3514605 3516011 R COG0833 Amino acid transporters; amino acid permease-associated protein complement(3514605..3516011) Pseudomonas putida HB3267 14289554 YP_007230007.1 CDS B479_15860 NC_019905.1 3516229 3518481 R COG0642 Signal transduction histidine kinase; multi-sensor hybrid histidine kinase complement(3516229..3518481) Pseudomonas putida HB3267 14289555 YP_007230008.1 CDS B479_15865 NC_019905.1 3518478 3519254 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; extracellular solute-binding protein complement(3518478..3519254) Pseudomonas putida HB3267 14289556 YP_007230009.1 CDS B479_15870 NC_019905.1 3519251 3519967 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component transcriptional regulator complement(3519251..3519967) Pseudomonas putida HB3267 14289557 YP_007230010.1 CDS B479_15875 NC_019905.1 3520043 3520687 R COG1309 Transcriptional regulator; TetR family transcriptional regulator complement(3520043..3520687) Pseudomonas putida HB3267 14289558 YP_007230011.1 CDS B479_15880 NC_019905.1 3520790 3521536 D COG1024 Enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase/isomerase 3520790..3521536 Pseudomonas putida HB3267 14289559 YP_007230012.1 CDS B479_15885 NC_019905.1 3521737 3522792 R COG5621 Predicted secreted hydrolase; putative lipoprotein complement(3521737..3522792) Pseudomonas putida HB3267 14289560 YP_007230013.1 CDS B479_15890 NC_019905.1 3522782 3525244 R COG0577 ABC-type antimicrobial peptide transport system, permease component; hypothetical protein complement(3522782..3525244) Pseudomonas putida HB3267 14289561 YP_007230014.1 CDS B479_15895 NC_019905.1 3525241 3525909 R COG1136 ABC-type antimicrobial peptide transport system, ATPase component; ABC transporter ATP-binding protein complement(3525241..3525909) Pseudomonas putida HB3267 14289562 YP_007230015.1 CDS B479_15900 NC_019905.1 3526253 3527263 D COG3520 Uncharacterized protein conserved in bacteria; hypothetical protein 3526253..3527263 Pseudomonas putida HB3267 14289563 YP_007230016.1 CDS B479_15905 NC_019905.1 3527568 3530864 R COG3523 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3527568..3530864) Pseudomonas putida HB3267 14289564 YP_007230017.1 CDS B479_15910 NC_019905.1 3531187 3531861 D COG3209 Rhs family protein; YD repeat protein 3531187..3531861 Pseudomonas putida HB3267 14289565 YP_007230018.1 CDS B479_15915 NC_019905.1 3532780 3533106 D hypothetical protein 3532780..3533106 Pseudomonas putida HB3267 14289566 YP_007230019.1 CDS B479_15920 NC_019905.1 3534643 3535080 D hypothetical protein 3534643..3535080 Pseudomonas putida HB3267 14289567 YP_007230020.1 CDS B479_15925 NC_019905.1 3536534 3536893 D hypothetical protein 3536534..3536893 Pseudomonas putida HB3267 14289568 YP_007230021.1 CDS B479_15930 NC_019905.1 3537067 3537429 D hypothetical protein 3537067..3537429 Pseudomonas putida HB3267 14289569 YP_007230022.1 CDS B479_15935 NC_019905.1 3537557 3537997 R COG3293 Transposase and inactivated derivatives; IS4, transposase complement(3537557..3537997) Pseudomonas putida HB3267 14289570 YP_007230023.1 CDS B479_15940 NC_019905.1 3538033 3538413 R COG3293 Transposase and inactivated derivatives; ISPs1, transposase OrfA complement(3538033..3538413) Pseudomonas putida HB3267 14289571 YP_007230024.1 CDS B479_15945 NC_019905.1 3538802 3540697 D COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 2 3538802..3540697 Pseudomonas putida HB3267 14289572 YP_007230025.1 CDS B479_15950 NC_019905.1 3540907 3541215 R hypothetical protein complement(3540907..3541215) Pseudomonas putida HB3267 14289573 YP_007230026.1 CDS B479_15955 NC_019905.1 3541236 3541478 D hypothetical protein 3541236..3541478 Pseudomonas putida HB3267 14289574 YP_007230027.1 CDS B479_15960 NC_019905.1 3541573 3542199 R COG0625 Glutathione S-transferase; glutathione S-transferase complement(3541573..3542199) Pseudomonas putida HB3267 14289575 YP_007230028.1 CDS B479_15965 NC_019905.1 3542372 3542689 D hypothetical protein 3542372..3542689 Pseudomonas putida HB3267 14289576 YP_007230029.1 CDS B479_15970 NC_019905.1 3542821 3543585 R COG2186 Transcriptional regulators; DNA-binding transcriptional regulator GlcC complement(3542821..3543585) Pseudomonas putida HB3267 14289577 YP_007230030.1 CDS B479_15975 NC_019905.1 3543781 3545280 D COG0277 FAD/FMN-containing dehydrogenases; glycolate oxidase subunit GlcD 3543781..3545280 Pseudomonas putida HB3267 14289578 YP_007230031.1 CDS glcE NC_019905.1 3545280 3546332 D COG0277 FAD/FMN-containing dehydrogenases; glycolate oxidase FAD binding subunit 3545280..3546332 Pseudomonas putida HB3267 14289579 YP_007230032.1 CDS glcF NC_019905.1 3546342 3547577 D COG0247 Fe-S oxidoreductase; glycolate oxidase iron-sulfur subunit 3546342..3547577 Pseudomonas putida HB3267 14289580 YP_007230033.1 CDS B479_15990 NC_019905.1 3547570 3547968 D COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol; hypothetical protein 3547570..3547968 Pseudomonas putida HB3267 14289581 YP_007230034.1 CDS B479_15995 NC_019905.1 3548121 3550292 D COG2225 Malate synthase; malate synthase G 3548121..3550292 Pseudomonas putida HB3267 14289582 YP_007230035.1 CDS B479_16000 NC_019905.1 3550461 3550799 D hypothetical protein 3550461..3550799 Pseudomonas putida HB3267 14289583 YP_007230036.1 CDS B479_16005 NC_019905.1 3550892 3552325 D COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; GntR family transcriptional regulator 3550892..3552325 Pseudomonas putida HB3267 14289584 YP_007230037.1 CDS B479_16010 NC_019905.1 3552318 3553502 R COG2807 Cyanate permease; major facilitator superfamily transporter complement(3552318..3553502) Pseudomonas putida HB3267 14289585 YP_007230038.1 CDS B479_16015 NC_019905.1 3553511 3553966 R COG0590 Cytosine/adenosine deaminases; deaminase complement(3553511..3553966) Pseudomonas putida HB3267 14289586 YP_007230039.1 CDS B479_16020 NC_019905.1 3554163 3554600 D COG2128 Uncharacterized conserved protein; alkylhydroperoxidase 3554163..3554600 Pseudomonas putida HB3267 14289587 YP_007230040.1 CDS B479_16025 NC_019905.1 3554731 3555741 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(3554731..3555741) Pseudomonas putida HB3267 14289588 YP_007230041.1 CDS B479_16030 NC_019905.1 3555910 3557094 D COG0183 Acetyl-CoA acetyltransferase; beta-ketothiolase 3555910..3557094 Pseudomonas putida HB3267 14289589 YP_007230042.1 CDS B479_16035 NC_019905.1 3557108 3557956 D COG1250 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase 3557108..3557956 Pseudomonas putida HB3267 14289590 YP_007230043.1 CDS B479_16040 NC_019905.1 3557969 3558550 D COG1309 Transcriptional regulator; TetR family transcriptional regulator 3557969..3558550 Pseudomonas putida HB3267 14289591 YP_007230044.1 CDS B479_16045 NC_019905.1 3558660 3559037 R COG0784 FOG: CheY-like receiver; Response regulator receiver protein complement(3558660..3559037) Pseudomonas putida HB3267 14289592 YP_007230045.1 CDS B479_16050 NC_019905.1 3559082 3560308 R COG0642 Signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase complement(3559082..3560308) Pseudomonas putida HB3267 14289593 YP_007230046.1 CDS B479_16055 NC_019905.1 3560302 3560877 R COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; CheB methylesterase complement(3560302..3560877) Pseudomonas putida HB3267 14289594 YP_007230047.1 CDS B479_16060 NC_019905.1 3560874 3561695 R COG1352 Methylase of chemotaxis methyl-accepting proteins; chemotaxis protein CheR complement(3560874..3561695) Pseudomonas putida HB3267 14289595 YP_007230048.1 CDS B479_16065 NC_019905.1 3561692 3565159 R COG0642 Signal transduction histidine kinase; multi-sensor hybrid histidine kinase complement(3561692..3565159) Pseudomonas putida HB3267 14289596 YP_007230049.1 CDS B479_16070 NC_019905.1 3565406 3565756 D COG0784 FOG: CheY-like receiver; response regulator receiver protein 3565406..3565756 Pseudomonas putida HB3267 14289597 YP_007230050.1 CDS B479_16075 NC_019905.1 3565788 3566537 R COG2243 Precorrin-2 methylase; precorrin 6A synthase complement(3565788..3566537) Pseudomonas putida HB3267 14289598 YP_007230051.1 CDS B479_16080 NC_019905.1 3566605 3567894 R outer membrane porin complement(3566605..3567894) Pseudomonas putida HB3267 14289599 YP_007230052.1 CDS B479_16085 NC_019905.1 3568256 3568615 D transcriptional regulator MvaT, P16 subunit 3568256..3568615 Pseudomonas putida HB3267 14289600 YP_007230053.1 CDS B479_16090 NC_019905.1 3568841 3569368 D COG0346 Lactoylglutathione lyase and related lyases; lactoylglutathione lyase 3568841..3569368 Pseudomonas putida HB3267 14289601 YP_007230054.1 CDS B479_16095 NC_019905.1 3569466 3569708 D hypothetical protein 3569466..3569708 Pseudomonas putida HB3267 14289602 YP_007230055.1 CDS B479_16100 NC_019905.1 3569835 3570656 R COG0169 Shikimate 5-dehydrogenase; shikimate 5-dehydrogenase complement(3569835..3570656) Pseudomonas putida HB3267 14289603 YP_007230056.1 CDS B479_16105 NC_019905.1 3570819 3571163 D hypothetical protein 3570819..3571163 Pseudomonas putida HB3267 14289604 YP_007230057.1 CDS B479_16110 NC_019905.1 3571257 3571439 D hypothetical protein 3571257..3571439 Pseudomonas putida HB3267 14289605 YP_007230058.1 CDS B479_16115 NC_019905.1 3571513 3571998 R COG4678 Muramidase (phage lambda lysozyme); endolysin complement(3571513..3571998) Pseudomonas putida HB3267 14289606 YP_007230059.1 CDS B479_16120 NC_019905.1 3572063 3572428 R hypothetical protein complement(3572063..3572428) Pseudomonas putida HB3267 14289607 YP_007230060.1 CDS B479_16125 NC_019905.1 3572591 3573415 D COG2932 Predicted transcriptional regulator; putative phage repressor 3572591..3573415 Pseudomonas putida HB3267 14289608 YP_007230061.1 CDS B479_16130 NC_019905.1 3573553 3573825 R hypothetical protein complement(3573553..3573825) Pseudomonas putida HB3267 14289609 YP_007230062.1 CDS B479_16135 NC_019905.1 3574114 3574788 D alginate lyase 2 3574114..3574788 Pseudomonas putida HB3267 14289610 YP_007230063.1 CDS B479_16140 NC_019905.1 3575000 3575257 D hypothetical protein 3575000..3575257 Pseudomonas putida HB3267 14289611 YP_007230064.1 CDS B479_16145 NC_019905.1 3575355 3575654 R hypothetical protein complement(3575355..3575654) Pseudomonas putida HB3267 14289612 YP_007230065.1 CDS pbpG NC_019905.1 3575972 3576910 D COG1686 D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine endopeptidase 3575972..3576910 Pseudomonas putida HB3267 14289613 YP_007230066.1 CDS B479_16155 NC_019905.1 3577062 3577496 R hypothetical protein complement(3577062..3577496) Pseudomonas putida HB3267 14289614 YP_007230067.1 CDS B479_16160 NC_019905.1 3577699 3579033 D COG3486 Lysine/ornithine N-monooxygenase; L-ornithine N5-oxygenase 3577699..3579033 Pseudomonas putida HB3267 14289615 YP_007230068.1 CDS B479_16165 NC_019905.1 3579295 3580488 D COG3182 Uncharacterized iron-regulated membrane protein; peptidase 3579295..3580488 Pseudomonas putida HB3267 14289616 YP_007230069.1 CDS B479_16170 NC_019905.1 3580485 3581024 D hypothetical protein 3580485..3581024 Pseudomonas putida HB3267 14289617 YP_007230070.1 CDS B479_16175 NC_019905.1 3581021 3581341 D hypothetical protein 3581021..3581341 Pseudomonas putida HB3267 14289618 YP_007230071.1 CDS B479_16180 NC_019905.1 3581338 3581907 D hypothetical protein 3581338..3581907 Pseudomonas putida HB3267 14289619 YP_007230072.1 CDS B479_16185 NC_019905.1 3581924 3582826 D COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; periplasmic solute binding protein 3581924..3582826 Pseudomonas putida HB3267 14289620 YP_007230073.1 CDS B479_16190 NC_019905.1 3582823 3583569 D COG1121 ABC-type Mn/Zn transport systems, ATPase component; cation ABC transporter ATP-binding protein 3582823..3583569 Pseudomonas putida HB3267 14289621 YP_007230074.1 CDS B479_16195 NC_019905.1 3583569 3584468 D COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; putative ABC transport protein 3583569..3584468 Pseudomonas putida HB3267 14289622 YP_007230075.1 CDS B479_16200 NC_019905.1 3584465 3585328 D COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; hypothetical protein 3584465..3585328 Pseudomonas putida HB3267 14289623 YP_007230076.1 CDS B479_16205 NC_019905.1 3585507 3586559 R hypothetical protein complement(3585507..3586559) Pseudomonas putida HB3267 14289624 YP_007230077.1 CDS B479_16210 NC_019905.1 3586586 3587137 R COG1335 Amidases related to nicotinamidase; isochorismatase superfamily hydrolase complement(3586586..3587137) Pseudomonas putida HB3267 14289625 YP_007230078.1 CDS B479_16215 NC_019905.1 3587195 3587914 R COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis; thioesterase complement(3587195..3587914) Pseudomonas putida HB3267 14289626 YP_007230079.1 CDS B479_16220 NC_019905.1 3587911 3588132 R COG3251 Uncharacterized protein conserved in bacteria; MbtH domain-containing protein complement(3587911..3588132) Pseudomonas putida HB3267 14289627 YP_007230080.1 CDS B479_16225 NC_019905.1 3588236 3588637 R COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); hypothetical protein complement(3588236..3588637) Pseudomonas putida HB3267 14289628 YP_007230081.1 CDS B479_16230 NC_019905.1 3588876 3589742 D COG0788 Formyltetrahydrofolate hydrolase; formyltetrahydrofolate deformylase 3588876..3589742 Pseudomonas putida HB3267 14289629 YP_007230082.1 CDS B479_16235 NC_019905.1 3589739 3590650 D COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 3589739..3590650 Pseudomonas putida HB3267 14289630 YP_007230083.1 CDS B479_16240 NC_019905.1 3590632 3591873 D COG0665 Glycine/D-amino acid oxidases (deaminating); FAD dependent oxidoreductase 3590632..3591873 Pseudomonas putida HB3267 14289631 YP_007230084.1 CDS B479_16245 NC_019905.1 3591886 3592191 D COG4311 Sarcosine oxidase delta subunit; sarcosine oxidase subunit delta heterotetrameric 3591886..3592191 Pseudomonas putida HB3267 14289632 YP_007230085.1 CDS B479_16250 NC_019905.1 3592188 3595091 D COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; glycine cleavage T protein (aminomethyl transferase) 3592188..3595091 Pseudomonas putida HB3267 14289633 YP_007230086.1 CDS B479_16255 NC_019905.1 3595095 3595700 D COG4583 Sarcosine oxidase gamma subunit; hypothetical protein 3595095..3595700 Pseudomonas putida HB3267 14289634 YP_007230087.1 CDS B479_16260 NC_019905.1 3595942 3596826 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(3595942..3596826) Pseudomonas putida HB3267 14289635 YP_007230088.1 CDS B479_16265 NC_019905.1 3596972 3597991 D COG0657 Esterase/lipase; alpha/beta hydrolase domain-containing protein 3596972..3597991 Pseudomonas putida HB3267 14289636 YP_007230089.1 CDS B479_16270 NC_019905.1 3598046 3598768 D COG1741 Pirin-related protein; pirin domain-containing protein 3598046..3598768 Pseudomonas putida HB3267 14289637 YP_007230090.1 CDS B479_16275 NC_019905.1 3598895 3599188 R COG5470 Uncharacterized conserved protein; hypothetical protein complement(3598895..3599188) Pseudomonas putida HB3267 14289638 YP_007230091.1 CDS B479_16280 NC_019905.1 3599267 3600388 D COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 3599267..3600388 Pseudomonas putida HB3267 14289639 YP_007230092.1 CDS B479_16285 NC_019905.1 3600743 3601768 D COG0687 Spermidine/putrescine-binding periplasmic protein; extracellular solute-binding protein 3600743..3601768 Pseudomonas putida HB3267 14289640 YP_007230093.1 CDS B479_16290 NC_019905.1 3601765 3602682 D COG1176 ABC-type spermidine/putrescine transport system, permease component I; binding-protein-dependent transport system inner membrane protein 3601765..3602682 Pseudomonas putida HB3267 14289641 YP_007230094.1 CDS B479_16295 NC_019905.1 3602689 3603498 D COG1177 ABC-type spermidine/putrescine transport system, permease component II; binding-protein-dependent transport system inner membrane protein 3602689..3603498 Pseudomonas putida HB3267 14289642 YP_007230095.1 CDS B479_16300 NC_019905.1 3603518 3604666 D COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Polyamine ABC transporter ATP-binding protein 3603518..3604666 Pseudomonas putida HB3267 14289643 YP_007230096.1 CDS B479_16305 NC_019905.1 3604906 3606213 D COG0226 ABC-type phosphate transport system, periplasmic component; OmpA/MotB domain-containing protein 3604906..3606213 Pseudomonas putida HB3267 14289644 YP_007230097.1 CDS B479_16310 NC_019905.1 3606506 3607570 D COG0861 Membrane protein TerC, possibly involved in tellurium resistance; integral membrane protein TerC 3606506..3607570 Pseudomonas putida HB3267 14289645 YP_007230098.1 CDS B479_16315 NC_019905.1 3607648 3608877 R COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase complement(3607648..3608877) Pseudomonas putida HB3267 14289646 YP_007230099.1 CDS B479_16320 NC_019905.1 3609018 3609944 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 3609018..3609944 Pseudomonas putida HB3267 14289647 YP_007230100.1 CDS B479_16325 NC_019905.1 3610116 3611270 D COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; class V aminotransferase 3610116..3611270 Pseudomonas putida HB3267 14289648 YP_007230101.1 CDS B479_16330 NC_019905.1 3611278 3611715 R COG5654 Uncharacterized conserved protein; RES domain-containing protein complement(3611278..3611715) Pseudomonas putida HB3267 14289649 YP_007230102.1 CDS B479_16335 NC_019905.1 3611712 3612161 R COG5642 Uncharacterized conserved protein; hypothetical protein complement(3611712..3612161) Pseudomonas putida HB3267 14289650 YP_007230103.1 CDS B479_16340 NC_019905.1 3612260 3612913 R COG0778 Nitroreductase; dihydropteridine reductase complement(3612260..3612913) Pseudomonas putida HB3267 14289651 YP_007230104.1 CDS B479_16345 NC_019905.1 3613018 3613941 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 3613018..3613941 Pseudomonas putida HB3267 14289652 YP_007230105.1 CDS B479_16350 NC_019905.1 3613989 3614819 D COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator 3613989..3614819 Pseudomonas putida HB3267 14289653 YP_007230106.1 CDS B479_16355 NC_019905.1 3614870 3615454 D COG1280 Putative threonine efflux protein; lysine exporter protein LysE/YggA 3614870..3615454 Pseudomonas putida HB3267 14289654 YP_007230107.1 CDS B479_16360 NC_019905.1 3615594 3616769 R COG2814 Arabinose efflux permease; arabinose transporter complement(3615594..3616769) Pseudomonas putida HB3267 14289655 YP_007230108.1 CDS B479_16365 NC_019905.1 3616950 3618317 D hypothetical protein 3616950..3618317 Pseudomonas putida HB3267 14289656 YP_007230109.1 CDS B479_16370 NC_019905.1 3618393 3619445 R COG1064 Zn-dependent alcohol dehydrogenases; alcohol dehydrogenase complement(3618393..3619445) Pseudomonas putida HB3267 14289657 YP_007230110.1 CDS B479_16375 NC_019905.1 3619626 3620531 D COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator 3619626..3620531 Pseudomonas putida HB3267 14289658 YP_007230111.1 CDS B479_16380 NC_019905.1 3620664 3621260 R COG1309 Transcriptional regulator; TetR family transcriptional regulator complement(3620664..3621260) Pseudomonas putida HB3267 14289659 YP_007230112.1 CDS B479_16385 NC_019905.1 3621354 3621950 D COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); NAD(P)H dehydrogenase (quinone) 3621354..3621950 Pseudomonas putida HB3267 14289660 YP_007230113.1 CDS B479_16390 NC_019905.1 3621952 3622497 R COG1514 2'-5' RNA ligase; 2'-5' RNA ligase complement(3621952..3622497) Pseudomonas putida HB3267 14289661 YP_007230114.1 CDS B479_16395 NC_019905.1 3622622 3623422 D COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; hypothetical protein 3622622..3623422 Pseudomonas putida HB3267 14289662 YP_007230115.1 CDS B479_16400 NC_019905.1 3623571 3624470 D COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases; aspartyl/asparaginyl beta-hydroxylase 3623571..3624470 Pseudomonas putida HB3267 14289663 YP_007230116.1 CDS B479_16405 NC_019905.1 3624596 3624934 D COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit; alkylhydroperoxidase 3624596..3624934 Pseudomonas putida HB3267 14289664 YP_007230117.1 CDS B479_16410 NC_019905.1 3625013 3625582 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; rhs-like protein 3625013..3625582 Pseudomonas putida HB3267 14289665 YP_007230118.1 CDS B479_16415 NC_019905.1 3625661 3626872 D COG3633 Na+/serine symporter; serine/threonine transporter SstT 3625661..3626872 Pseudomonas putida HB3267 14289666 YP_007230119.1 CDS B479_16420 NC_019905.1 3627052 3627699 D COG3132 Uncharacterized protein conserved in bacteria; hypothetical protein 3627052..3627699 Pseudomonas putida HB3267 14289667 YP_007230120.1 CDS B479_16425 NC_019905.1 3627704 3627892 R hypothetical protein complement(3627704..3627892) Pseudomonas putida HB3267 14289668 YP_007230121.1 CDS B479_16430 NC_019905.1 3628062 3629624 R COG3634 Alkyl hydroperoxide reductase, large subunit; alkyl hydroperoxide reductase subunit F complement(3628062..3629624) Pseudomonas putida HB3267 14289669 YP_007230122.1 CDS B479_16435 NC_019905.1 3629749 3630312 R COG0450 Peroxiredoxin; alkyl hydroperoxide reductase subunit C complement(3629749..3630312) Pseudomonas putida HB3267 14289670 YP_007230123.1 CDS B479_16440 NC_019905.1 3630638 3631993 R COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; glutathione reductase complement(3630638..3631993) Pseudomonas putida HB3267 14289671 YP_007230124.1 CDS B479_16445 NC_019905.1 3632182 3633021 R COG1210 UDP-glucose pyrophosphorylase; UTP-glucose-1-phosphate uridylyltransferase complement(3632182..3633021) Pseudomonas putida HB3267 14289672 YP_007230125.1 CDS B479_16450 NC_019905.1 3633261 3634175 R COG3258 Cytochrome c; cytochrome c class I complement(3633261..3634175) Pseudomonas putida HB3267 14289673 YP_007230126.1 CDS B479_16455 NC_019905.1 3634172 3634822 R COG2863 Cytochrome c553; cytochrome c-type protein complement(3634172..3634822) Pseudomonas putida HB3267 14289674 YP_007230127.1 CDS B479_16460 NC_019905.1 3634900 3635259 R hypothetical protein complement(3634900..3635259) Pseudomonas putida HB3267 14289675 YP_007230128.1 CDS B479_16465 NC_019905.1 3635420 3635722 D hypothetical protein 3635420..3635722 Pseudomonas putida HB3267 14289676 YP_007230129.1 CDS B479_16470 NC_019905.1 3635730 3635900 D hypothetical protein 3635730..3635900 Pseudomonas putida HB3267 14289677 YP_007230130.1 CDS B479_16475 NC_019905.1 3635944 3637032 D COG2070 Dioxygenases related to 2-nitropropane dioxygenase; 2-nitropropane dioxygenase 3635944..3637032 Pseudomonas putida HB3267 14289678 YP_007230131.1 CDS B479_16480 NC_019905.1 3637113 3637871 D COG0725 ABC-type molybdate transport system, periplasmic component; molybdenum ABC transporter periplasmic molybdate-binding protein 3637113..3637871 Pseudomonas putida HB3267 14289679 YP_007230132.1 CDS B479_16485 NC_019905.1 3637871 3638551 D COG4149 ABC-type molybdate transport system, permease component; molybdate ABC transporter permease 3637871..3638551 Pseudomonas putida HB3267 14289680 YP_007230133.1 CDS B479_16490 NC_019905.1 3638553 3639644 D COG4148 ABC-type molybdate transport system, ATPase component; molybdate ABC transporter ATPase 3638553..3639644 Pseudomonas putida HB3267 14289681 YP_007230134.1 CDS B479_16495 NC_019905.1 3639702 3640724 D COG3569 Topoisomerase IB; DNA topoisomerase 3639702..3640724 Pseudomonas putida HB3267 14289682 YP_007230135.1 CDS B479_16500 NC_019905.1 3640978 3641175 D COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); carbon storage regulator 3640978..3641175 Pseudomonas putida HB3267 14289683 YP_007230136.1 CDS B479_16505 NC_019905.1 3641221 3641574 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; response regulator receiver protein complement(3641221..3641574) Pseudomonas putida HB3267 14289684 YP_007230137.1 CDS B479_16510 NC_019905.1 3641586 3643031 R COG0467 RecA-superfamily ATPases implicated in signal transduction; non-specific serine/threonine protein kinase complement(3641586..3643031) Pseudomonas putida HB3267 14289685 YP_007230138.1 CDS B479_16515 NC_019905.1 3643038 3644162 R COG2202 FOG: PAS/PAC domain; PAS/PAC sensor signal transduction histidine kinase complement(3643038..3644162) Pseudomonas putida HB3267 14289686 YP_007230139.1 CDS B479_16520 NC_019905.1 3644238 3644456 R hypothetical protein complement(3644238..3644456) Pseudomonas putida HB3267 14289687 YP_007230140.1 CDS B479_16525 NC_019905.1 3644905 3645318 D COG2259 Predicted membrane protein; DoxX family protein 3644905..3645318 Pseudomonas putida HB3267 14291752 YP_007230141.1 CDS B479_16530 NC_019905.1 3645320 3645517 R hypothetical protein complement(3645320..3645517) Pseudomonas putida HB3267 14289689 YP_007230142.1 CDS B479_16535 NC_019905.1 3645977 3646987 D COG1064 Zn-dependent alcohol dehydrogenases; ethanol-active dehydrogenase/acetaldehyde-active reductase 3645977..3646987 Pseudomonas putida HB3267 14289690 YP_007230143.1 CDS B479_16540 NC_019905.1 3647153 3647389 D hypothetical protein 3647153..3647389 Pseudomonas putida HB3267 14289691 YP_007230144.1 CDS B479_16545 NC_019905.1 3647406 3647642 R hypothetical protein complement(3647406..3647642) Pseudomonas putida HB3267 14289692 YP_007230145.1 CDS B479_16550 NC_019905.1 3647753 3648967 R hypothetical protein complement(3647753..3648967) Pseudomonas putida HB3267 14289693 YP_007230146.1 CDS B479_16555 NC_019905.1 3649185 3650078 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 3649185..3650078 Pseudomonas putida HB3267 14289694 YP_007230147.1 CDS B479_16560 NC_019905.1 3650177 3650881 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain dehydrogenase/reductase SDR 3650177..3650881 Pseudomonas putida HB3267 14289695 YP_007230148.1 CDS B479_16565 NC_019905.1 3650937 3651491 D COG0259 Pyridoxamine-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 3650937..3651491 Pseudomonas putida HB3267 14289696 YP_007230149.1 CDS B479_16570 NC_019905.1 3651532 3651822 D hypothetical protein 3651532..3651822 Pseudomonas putida HB3267 14289697 YP_007230150.1 CDS B479_16575 NC_019905.1 3651946 3652185 R hypothetical protein complement(3651946..3652185) Pseudomonas putida HB3267 14289698 YP_007230151.1 CDS B479_16580 NC_019905.1 3652544 3652675 D hypothetical protein 3652544..3652675 Pseudomonas putida HB3267 14289699 YP_007230152.1 CDS B479_16585 NC_019905.1 3652656 3652838 D hypothetical protein 3652656..3652838 Pseudomonas putida HB3267 14289700 YP_007230153.1 CDS B479_16590 NC_019905.1 3653041 3653262 D hypothetical protein 3653041..3653262 Pseudomonas putida HB3267 14289701 YP_007230154.1 CDS B479_16595 NC_019905.1 3653998 3654183 R hypothetical protein complement(3653998..3654183) Pseudomonas putida HB3267 14289702 YP_007230155.1 CDS B479_16600 NC_019905.1 3654532 3655104 D hypothetical protein 3654532..3655104 Pseudomonas putida HB3267 14289703 YP_007230156.1 CDS B479_16605 NC_019905.1 3655256 3655939 R hypothetical protein complement(3655256..3655939) Pseudomonas putida HB3267 14289704 YP_007230157.1 CDS B479_16610 NC_019905.1 3656586 3656807 R hypothetical protein complement(3656586..3656807) Pseudomonas putida HB3267 14289705 YP_007230158.1 CDS B479_16615 NC_019905.1 3657198 3657464 D hypothetical protein 3657198..3657464 Pseudomonas putida HB3267 14289706 YP_007230159.1 CDS B479_16620 NC_019905.1 3657621 3657719 R hypothetical protein complement(3657621..3657719) Pseudomonas putida HB3267 14291753 YP_007230160.1 CDS B479_16625 NC_019905.1 3657785 3658804 R COG0616 Periplasmic serine proteases (ClpP class); inner membrane peptidase complement(3657785..3658804) Pseudomonas putida HB3267 14289708 YP_007230161.1 CDS B479_16630 NC_019905.1 3659002 3659712 D COG0406 Fructose-2,6-bisphosphatase; phosphoglycerate mutase 3659002..3659712 Pseudomonas putida HB3267 14289709 YP_007230162.1 CDS B479_16635 NC_019905.1 3659769 3660086 D COG3255 Putative sterol carrier protein; Sterol-binding domain-containing protein 3659769..3660086 Pseudomonas putida HB3267 14289710 YP_007230163.1 CDS B479_16640 NC_019905.1 3660333 3661400 D COG3173 Predicted aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 3660333..3661400 Pseudomonas putida HB3267 14289711 YP_007230164.1 CDS B479_16645 NC_019905.1 3661437 3662204 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short chain dehydrogenase 3661437..3662204 Pseudomonas putida HB3267 14289712 YP_007230165.1 CDS B479_16650 NC_019905.1 3662205 3663026 R COG0500 SAM-dependent methyltransferases; type 12 methyltransferase complement(3662205..3663026) Pseudomonas putida HB3267 14289713 YP_007230166.1 CDS B479_16655 NC_019905.1 3663178 3663528 R COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; hypothetical protein complement(3663178..3663528) Pseudomonas putida HB3267 14289714 YP_007230167.1 CDS B479_16660 NC_019905.1 3663643 3663933 D COG5455 Predicted integral membrane protein; hypothetical protein 3663643..3663933 Pseudomonas putida HB3267 14289715 YP_007230168.1 CDS B479_16665 NC_019905.1 3664045 3664299 R hypothetical protein complement(3664045..3664299) Pseudomonas putida HB3267 14289716 YP_007230169.1 CDS B479_16670 NC_019905.1 3664332 3664715 D 17 kDa surface antigen 3664332..3664715 Pseudomonas putida HB3267 14289717 YP_007230170.1 CDS B479_16675 NC_019905.1 3664854 3666683 D COG0471 Di- and tricarboxylate transporters; citrate transporter 3664854..3666683 Pseudomonas putida HB3267 14289718 YP_007230171.1 CDS B479_16680 NC_019905.1 3666821 3668245 D COG2199 FOG: GGDEF domain; diguanylate cyclase 3666821..3668245 Pseudomonas putida HB3267 14289719 YP_007230172.1 CDS B479_16685 NC_019905.1 3668247 3669008 R COG0730 Predicted permeases; hypothetical protein complement(3668247..3669008) Pseudomonas putida HB3267 14289720 YP_007230173.1 CDS B479_16690 NC_019905.1 3669107 3670012 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 3669107..3670012 Pseudomonas putida HB3267 14289721 YP_007230174.1 CDS B479_16695 NC_019905.1 3670851 3671429 D COG1335 Amidases related to nicotinamidase; isochorismatase superfamily hydrolase 3670851..3671429 Pseudomonas putida HB3267 14289722 YP_007230175.1 CDS B479_16700 NC_019905.1 3671550 3671750 D alpha/beta hydrolase fold protein 3671550..3671750 Pseudomonas putida HB3267 14289723 YP_007230176.1 CDS B479_16705 NC_019905.1 3672071 3672256 D hypothetical protein 3672071..3672256 Pseudomonas putida HB3267 14289724 YP_007230177.1 CDS B479_16710 NC_019905.1 3673113 3673328 D hypothetical protein 3673113..3673328 Pseudomonas putida HB3267 14289725 YP_007230178.1 CDS B479_16715 NC_019905.1 3673371 3673688 D hypothetical protein 3673371..3673688 Pseudomonas putida HB3267 14289726 YP_007230179.1 CDS B479_16720 NC_019905.1 3673847 3674890 R COG5518 Bacteriophage capsid portal protein; portal vertex protein complement(3673847..3674890) Pseudomonas putida HB3267 14289727 YP_007230180.1 CDS B479_16725 NC_019905.1 3674890 3676674 R phage P2 terminase ATPase subunit, gpP-like protein complement(3674890..3676674) Pseudomonas putida HB3267 14289728 YP_007230181.1 CDS B479_16730 NC_019905.1 3676794 3677648 D putative capsid scafolding protein 3676794..3677648 Pseudomonas putida HB3267 14289729 YP_007230182.1 CDS B479_16735 NC_019905.1 3677688 3678698 D phage major capsid protein, P2 family 3677688..3678698 Pseudomonas putida HB3267 14289730 YP_007230183.1 CDS B479_16740 NC_019905.1 3678702 3679403 D phage P2 small terminase subunit gpM-like protein 3678702..3679403 Pseudomonas putida HB3267 14289731 YP_007230184.1 CDS B479_16745 NC_019905.1 3679509 3679985 D phage head completion protein (GPL), putative 3679509..3679985 Pseudomonas putida HB3267 14289732 YP_007230185.1 CDS B479_16750 NC_019905.1 3679985 3680197 D COG5004 P2-like prophage tail protein X; phage P2 tail gpX-like protein 3679985..3680197 Pseudomonas putida HB3267 14289733 YP_007230186.1 CDS B479_16755 NC_019905.1 3680240 3680554 D holin-like protein 3680240..3680554 Pseudomonas putida HB3267 14289734 YP_007230187.1 CDS B479_16760 NC_019905.1 3680551 3681408 D COG3409 Putative peptidoglycan-binding domain-containing protein; putative peptidoglycan binding domain-containing protein 3680551..3681408 Pseudomonas putida HB3267 14289735 YP_007230188.1 CDS B479_16765 NC_019905.1 3681408 3681872 D phage lysis regulatory protein, LysB family 3681408..3681872 Pseudomonas putida HB3267 14289736 YP_007230189.1 CDS B479_16770 NC_019905.1 3681947 3682480 D hypothetical protein 3681947..3682480 Pseudomonas putida HB3267 14289737 YP_007230190.1 CDS B479_16775 NC_019905.1 3682473 3682928 D phage virion morphogenesis protein 3682473..3682928 Pseudomonas putida HB3267 14289738 YP_007230191.1 CDS B479_16780 NC_019905.1 3682954 3683547 D COG4540 Phage P2 baseplate assembly protein gpV; phage baseplate assembly protein V 3682954..3683547 Pseudomonas putida HB3267 14289739 YP_007230192.1 CDS B479_16785 NC_019905.1 3683544 3683888 D COG3628 Phage baseplate assembly protein W; hypothetical protein 3683544..3683888 Pseudomonas putida HB3267 14289740 YP_007230193.1 CDS B479_16790 NC_019905.1 3683885 3684799 D COG3948 Phage-related baseplate assembly protein; baseplate assembly protein J (GpJ) 3683885..3684799 Pseudomonas putida HB3267 14289741 YP_007230194.1 CDS B479_16795 NC_019905.1 3684796 3685407 D COG4385 Bacteriophage P2-related tail formation protein; phage tail protein I 3684796..3685407 Pseudomonas putida HB3267 14289742 YP_007230195.1 CDS B479_16800 NC_019905.1 3685400 3687313 D COG5301 Phage-related tail fibre protein; Phage-related tail fiber protein-like protein 3685400..3687313 Pseudomonas putida HB3267 14289743 YP_007230196.1 CDS B479_16805 NC_019905.1 3687381 3687746 D phage protein 3687381..3687746 Pseudomonas putida HB3267 14289744 YP_007230197.1 CDS B479_16810 NC_019905.1 3687834 3689006 D COG3497 Phage tail sheath protein FI; phage tail sheath protein 3687834..3689006 Pseudomonas putida HB3267 14289745 YP_007230198.1 CDS B479_16815 NC_019905.1 3689021 3689536 D COG3498 Phage tail tube protein FII; phage P2 FII-like protein 3689021..3689536 Pseudomonas putida HB3267 14289746 YP_007230199.1 CDS B479_16820 NC_019905.1 3689566 3689916 D phage tail protein E 3689566..3689916 Pseudomonas putida HB3267 14289747 YP_007230200.1 CDS B479_16825 NC_019905.1 3689925 3690044 D phage tail protein, P2 GpE family 3689925..3690044 Pseudomonas putida HB3267 14289748 YP_007230201.1 CDS B479_16830 NC_019905.1 3690034 3693315 D phage tail tape measure protein, TP901 family 3690034..3693315 Pseudomonas putida HB3267 14289749 YP_007230202.1 CDS B479_16835 NC_019905.1 3693322 3693762 D COG3499 Phage protein U; tail formation protein, phage P2 GpU 3693322..3693762 Pseudomonas putida HB3267 14289750 YP_007230203.1 CDS B479_16840 NC_019905.1 3693759 3695042 D COG3500 Phage protein D; phage late control D 3693759..3695042 Pseudomonas putida HB3267 14289751 YP_007230204.1 CDS B479_16845 NC_019905.1 3695151 3695531 R hypothetical protein complement(3695151..3695531) Pseudomonas putida HB3267 14289752 YP_007230205.1 CDS B479_16850 NC_019905.1 3695773 3696708 R COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); hypothetical protein complement(3695773..3696708) Pseudomonas putida HB3267 14289753 YP_007230206.1 CDS B479_16855 NC_019905.1 3697052 3697408 R COG1396 Predicted transcriptional regulators; helix-turn-helix domain-containing protein complement(3697052..3697408) Pseudomonas putida HB3267 14289754 YP_007230207.1 CDS B479_16860 NC_019905.1 3697467 3697676 D hypothetical protein 3697467..3697676 Pseudomonas putida HB3267 14289755 YP_007230208.1 CDS B479_16865 NC_019905.1 3697706 3698179 D hypothetical protein 3697706..3698179 Pseudomonas putida HB3267 14289756 YP_007230209.1 CDS B479_16870 NC_019905.1 3698176 3698475 D transcriptional activator Ogr/delta 3698176..3698475 Pseudomonas putida HB3267 14289757 YP_007230210.1 CDS B479_16875 NC_019905.1 3698472 3698846 D hypothetical protein 3698472..3698846 Pseudomonas putida HB3267 14289758 YP_007230211.1 CDS B479_16880 NC_019905.1 3698916 3699161 D hypothetical protein 3698916..3699161 Pseudomonas putida HB3267 14289759 YP_007230212.1 CDS B479_16885 NC_019905.1 3699158 3701896 D Toprim domain-containing protein 3699158..3701896 Pseudomonas putida HB3267 14289760 YP_007230213.1 CDS B479_16890 NC_019905.1 3701944 3702558 D COG0125 Thymidylate kinase; hypothetical protein 3701944..3702558 Pseudomonas putida HB3267 14289761 YP_007230214.1 CDS B479_16895 NC_019905.1 3702555 3702770 D hypothetical protein 3702555..3702770 Pseudomonas putida HB3267 14289762 YP_007230215.1 CDS B479_16900 NC_019905.1 3702824 3703411 D COG1219 ATP-dependent protease Clp, ATPase subunit; hypothetical protein 3702824..3703411 Pseudomonas putida HB3267 14289763 YP_007230216.1 CDS B479_16905 NC_019905.1 3703408 3703767 D hypothetical protein 3703408..3703767 Pseudomonas putida HB3267 14289764 YP_007230217.1 CDS B479_16910 NC_019905.1 3704056 3705861 D COG0270 Site-specific DNA methylase; C-5 cytosine-specific DNA methylase 3704056..3705861 Pseudomonas putida HB3267 14289765 YP_007230218.1 CDS B479_16915 NC_019905.1 3706017 3707147 D COG0582 Integrase; phage integrase 3706017..3707147 Pseudomonas putida HB3267 14289766 YP_007230219.1 CDS B479_16920 NC_019905.1 3707491 3708162 D COG0670 Integral membrane protein, interacts with FtsH; hypothetical protein 3707491..3708162 Pseudomonas putida HB3267 14291754 YP_007230220.1 CDS B479_16925 NC_019905.1 3708479 3709858 D COG2233 Xanthine/uracil permeases; xanthine permease 3708479..3709858 Pseudomonas putida HB3267 14289768 YP_007230221.1 CDS B479_16930 NC_019905.1 3710138 3710530 D COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction; sulfur transfer complex subunit TusD 3710138..3710530 Pseudomonas putida HB3267 14289769 YP_007230222.1 CDS B479_16935 NC_019905.1 3710532 3710891 D COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur; sulfur relay protein TusC 3710532..3710891 Pseudomonas putida HB3267 14289770 YP_007230223.1 CDS B479_16940 NC_019905.1 3710891 3711187 D COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur; sulfur relay protein TusB/DsrH 3710891..3711187 Pseudomonas putida HB3267 14289771 YP_007230224.1 CDS B479_16945 NC_019905.1 3711184 3711519 D COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit; hypothetical protein 3711184..3711519 Pseudomonas putida HB3267 14289772 YP_007230225.1 CDS B479_16950 NC_019905.1 3711516 3712520 D COG0547 Anthranilate phosphoribosyltransferase; hypothetical protein 3711516..3712520 Pseudomonas putida HB3267 14289773 YP_007230226.1 CDS B479_16955 NC_019905.1 3712613 3713572 D COG0435 Predicted glutathione S-transferase; glutathione S-transferase domain-containing protein 3712613..3713572 Pseudomonas putida HB3267 14289774 YP_007230227.1 CDS B479_16960 NC_019905.1 3713690 3715081 R COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); uroporphyrin-III C-methyltransferase complement(3713690..3715081) Pseudomonas putida HB3267 14289775 YP_007230228.1 CDS B479_16965 NC_019905.1 3715082 3716362 R COG0172 Seryl-tRNA synthetase; seryl-tRNA ligase complement(3715082..3716362) Pseudomonas putida HB3267 14289776 YP_007230229.1 CDS B479_16970 NC_019905.1 3716393 3716767 R COG0239 Integral membrane protein possibly involved in chromosome condensation; camphor resistance protein CrcB complement(3716393..3716767) Pseudomonas putida HB3267 14289777 YP_007230230.1 CDS B479_16975 NC_019905.1 3716764 3718089 R COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; recombination factor protein RarA complement(3716764..3718089) Pseudomonas putida HB3267 14289778 YP_007230231.1 CDS lolA NC_019905.1 3718102 3718737 R COG2834 Outer membrane lipoprotein-sorting protein; lipoprotein chaperone complement(3718102..3718737) Pseudomonas putida HB3267 14289779 YP_007230232.1 CDS B479_16985 NC_019905.1 3718800 3721259 R COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; cell division protein FtsK complement(3718800..3721259) Pseudomonas putida HB3267 14289780 YP_007230233.1 CDS aat NC_019905.1 3721735 3722415 D COG2360 Leu/Phe-tRNA-protein transferase; leucyl/phenylalanyl-tRNA--protein transferase 3721735..3722415 Pseudomonas putida HB3267 14289781 YP_007230234.1 CDS B479_16995 NC_019905.1 3722471 3723178 D COG2935 Putative arginyl-tRNA:protein arginylyltransferase; arginyl-tRNA-protein transferase 3722471..3723178 Pseudomonas putida HB3267 14289782 YP_007230235.1 CDS infA NC_019905.1 3723281 3723499 D COG0361 Translation initiation factor 1 (IF-1); translation initiation factor IF-1 3723281..3723499 Pseudomonas putida HB3267 14289783 YP_007230236.1 CDS B479_17005 NC_019905.1 3723671 3725941 R COG0542 ATPases with chaperone activity, ATP-binding subunit; ATP-dependent Clp protease ATP-binding subunit ClpA complement(3723671..3725941) Pseudomonas putida HB3267 14289784 YP_007230237.1 CDS clpS NC_019905.1 3725972 3726334 R COG2127 Uncharacterized conserved protein; ATP-dependent Clp protease adaptor protein ClpS complement(3725972..3726334) Pseudomonas putida HB3267 14289785 YP_007230238.1 CDS B479_17015 NC_019905.1 3726564 3726824 D COG1278 Cold shock proteins; cold-shock DNA-binding domain-containing protein 3726564..3726824 Pseudomonas putida HB3267 14289786 YP_007230239.1 CDS B479_17020 NC_019905.1 3726899 3728155 R COG0538 Isocitrate dehydrogenases; isocitrate dehydrogenase complement(3726899..3728155) Pseudomonas putida HB3267 14289787 YP_007230240.1 CDS B479_17025 NC_019905.1 3728583 3730808 D COG2838 Monomeric isocitrate dehydrogenase; isocitrate dehydrogenase 3728583..3730808 Pseudomonas putida HB3267 14289788 YP_007230241.1 CDS B479_17030 NC_019905.1 3731011 3731451 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; NUDIX hydrolase 3731011..3731451 Pseudomonas putida HB3267 14289789 YP_007230242.1 CDS mnmA NC_019905.1 3731512 3732636 D COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; tRNA-specific 2-thiouridylase MnmA 3731512..3732636 Pseudomonas putida HB3267 14289790 YP_007230243.1 CDS B479_17040 NC_019905.1 3732633 3733259 D COG2915 Uncharacterized protein involved in purine metabolism; lysogenization regulator 3732633..3733259 Pseudomonas putida HB3267 14289791 YP_007230244.1 CDS B479_17045 NC_019905.1 3733497 3734867 D COG0015 Adenylosuccinate lyase; adenylosuccinate lyase 3733497..3734867 Pseudomonas putida HB3267 14289792 YP_007230245.1 CDS B479_17050 NC_019905.1 3734949 3736115 D COG2850 Uncharacterized conserved protein; cupin 4 family protein 3734949..3736115 Pseudomonas putida HB3267 14289793 YP_007230246.1 CDS B479_17055 NC_019905.1 3736108 3736536 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; N-acetyltransferase GCN5 3736108..3736536 Pseudomonas putida HB3267 14289794 YP_007230247.1 CDS B479_17060 NC_019905.1 3736698 3738653 D COG0550 Topoisomerase IA; DNA topoisomerase III 3736698..3738653 Pseudomonas putida HB3267 14289795 YP_007230248.1 CDS B479_17065 NC_019905.1 3738887 3740176 D COG0665 Glycine/D-amino acid oxidases (deaminating); FAD dependent oxidoreductase 3738887..3740176 Pseudomonas putida HB3267 14289796 YP_007230249.1 CDS B479_17070 NC_019905.1 3740257 3741087 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold protein 3740257..3741087 Pseudomonas putida HB3267 14289797 YP_007230250.1 CDS B479_17075 NC_019905.1 3741314 3742219 D COG3209 Rhs family protein; hypothetical protein 3741314..3742219 Pseudomonas putida HB3267 14289798 YP_007230251.1 CDS B479_17080 NC_019905.1 3742348 3743127 D COG0730 Predicted permeases; hypothetical protein 3742348..3743127 Pseudomonas putida HB3267 14289799 YP_007230252.1 CDS nudC NC_019905.1 3743095 3743925 R COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding; NADH pyrophosphatase complement(3743095..3743925) Pseudomonas putida HB3267 14289800 YP_007230253.1 CDS B479_17090 NC_019905.1 3743962 3744774 R COG1024 Enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase complement(3743962..3744774) Pseudomonas putida HB3267 14289801 YP_007230254.1 CDS nhaB NC_019905.1 3744925 3746427 D COG3067 Na+/H+ antiporter; sodium/proton antiporter 3744925..3746427 Pseudomonas putida HB3267 14289802 YP_007230255.1 CDS B479_17100 NC_019905.1 3746623 3747237 D COG0262 Dihydrofolate reductase; deaminase-reductase domain-containing protein 3746623..3747237 Pseudomonas putida HB3267 14289803 YP_007230256.1 CDS B479_17105 NC_019905.1 3747318 3747863 D COG3040 Bacterial lipocalin; lipocalin family protein 3747318..3747863 Pseudomonas putida HB3267 14289804 YP_007230257.1 CDS B479_17110 NC_019905.1 3747944 3748405 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; NUDIX hydrolase 3747944..3748405 Pseudomonas putida HB3267 14289805 YP_007230258.1 CDS B479_17115 NC_019905.1 3748422 3749381 D COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III; ribonuclease Z 3748422..3749381 Pseudomonas putida HB3267 14289806 YP_007230259.1 CDS B479_17120 NC_019905.1 3749416 3749955 D COG0563 Adenylate kinase and related kinases; hypothetical protein 3749416..3749955 Pseudomonas putida HB3267 14289807 YP_007230260.1 CDS B479_17125 NC_019905.1 3750097 3751380 R COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; allantoate amidohydrolase complement(3750097..3751380) Pseudomonas putida HB3267 14289808 YP_007230261.1 CDS B479_17130 NC_019905.1 3751517 3753007 R COG1953 Cytosine/uracil/thiamine/allantoin permeases; cytosine/purines uracil thiamine allantoin permease complement(3751517..3753007) Pseudomonas putida HB3267 14289809 YP_007230262.1 CDS B479_17135 NC_019905.1 3753349 3754788 D COG0044 Dihydroorotase and related cyclic amidohydrolases; phenylhydantoinase 3753349..3754788 Pseudomonas putida HB3267 14289810 YP_007230263.1 CDS B479_17140 NC_019905.1 3754954 3756321 D COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; dihydropyrimidine dehydrogenase subunit A 3754954..3756321 Pseudomonas putida HB3267 14289811 YP_007230264.1 CDS B479_17145 NC_019905.1 3756322 3757596 D COG0167 Dihydroorotate dehydrogenase; dihydropyrimidine dehydrogenase subunit B 3756322..3757596 Pseudomonas putida HB3267 14289812 YP_007230265.1 CDS B479_17150 NC_019905.1 3757744 3758364 R COG1309 Transcriptional regulator; TetR family transcriptional regulator complement(3757744..3758364) Pseudomonas putida HB3267 14289813 YP_007230266.1 CDS B479_17155 NC_019905.1 3758624 3760420 R COG3387 Glucoamylase and related glycosyl hydrolases; acetyltransferase complement(3758624..3760420) Pseudomonas putida HB3267 14289814 YP_007230267.1 CDS B479_17160 NC_019905.1 3760565 3762070 R COG0364 Glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase complement(3760565..3762070) Pseudomonas putida HB3267 14289815 YP_007230268.1 CDS B479_17165 NC_019905.1 3762067 3763050 R COG1023 Predicted 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase-like protein complement(3762067..3763050) Pseudomonas putida HB3267 14289816 YP_007230269.1 CDS B479_17170 NC_019905.1 3763254 3763421 D hypothetical protein 3763254..3763421 Pseudomonas putida HB3267 14289817 YP_007230270.1 CDS glgA NC_019905.1 3764016 3765575 D COG0297 Glycogen synthase; glycogen synthase 3764016..3765575 Pseudomonas putida HB3267 14289818 YP_007230271.1 CDS B479_17180 NC_019905.1 3765590 3767332 D COG0296 1,4-alpha-glucan branching enzyme; malto-oligosyltrehalose trehalohydrolase 3765590..3767332 Pseudomonas putida HB3267 14289819 YP_007230272.1 CDS B479_17185 NC_019905.1 3767329 3769398 D COG1640 4-alpha-glucanotransferase; 4-alpha-glucanotransferase 3767329..3769398 Pseudomonas putida HB3267 14289820 YP_007230273.1 CDS B479_17190 NC_019905.1 3769395 3772169 D COG3280 Maltooligosyl trehalose synthase; maltooligosyl trehalose synthase 3769395..3772169 Pseudomonas putida HB3267 14289821 YP_007230274.1 CDS B479_17195 NC_019905.1 3772187 3772432 D hypothetical protein 3772187..3772432 Pseudomonas putida HB3267 14289822 YP_007230275.1 CDS B479_17200 NC_019905.1 3772586 3774739 D COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; glycogen debranching protein GlgX 3772586..3774739 Pseudomonas putida HB3267 14289823 YP_007230276.1 CDS B479_17205 NC_019905.1 3774918 3775727 D COG3568 Metal-dependent hydrolase; endonuclease/exonuclease/phosphatase 3774918..3775727 Pseudomonas putida HB3267 14289824 YP_007230277.1 CDS B479_17210 NC_019905.1 3776028 3777104 D COG3468 Type V secretory pathway, adhesin AidA; outer membrane autotransporter 3776028..3777104 Pseudomonas putida HB3267 14289825 YP_007230278.1 CDS B479_17215 NC_019905.1 3777222 3779432 R COG0296 1,4-alpha-glucan branching enzyme; glycogen branching enzyme complement(3777222..3779432) Pseudomonas putida HB3267 14289826 YP_007230279.1 CDS B479_17220 NC_019905.1 3779433 3782750 R COG0366 Glycosidases; trehalose synthase complement(3779433..3782750) Pseudomonas putida HB3267 14289827 YP_007230280.1 CDS B479_17225 NC_019905.1 3782807 3784825 R COG0366 Glycosidases; alpha amylase complement(3782807..3784825) Pseudomonas putida HB3267 14289828 YP_007230281.1 CDS B479_17230 NC_019905.1 3784966 3785127 D hypothetical protein 3784966..3785127 Pseudomonas putida HB3267 14289829 YP_007230282.1 CDS B479_17235 NC_019905.1 3785468 3787150 R COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; AMP-binding domain protein complement(3785468..3787150) Pseudomonas putida HB3267 14289830 YP_007230283.1 CDS B479_17240 NC_019905.1 3787474 3788637 D COG1960 Acyl-CoA dehydrogenases; isovaleryl-CoA dehydrogenase 3787474..3788637 Pseudomonas putida HB3267 14289831 YP_007230284.1 CDS B479_17245 NC_019905.1 3788657 3790264 D COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); propionyl-CoA carboxylase 3788657..3790264 Pseudomonas putida HB3267 14289832 YP_007230285.1 CDS B479_17250 NC_019905.1 3790268 3791083 D COG1024 Enoyl-CoA hydratase/carnithine racemase; gamma-carboxygeranoyl-CoA hydratase 3790268..3791083 Pseudomonas putida HB3267 14289833 YP_007230286.1 CDS B479_17255 NC_019905.1 3791080 3793032 D COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit; acetyl-CoA carboxylase, biotin carboxylase 3791080..3793032 Pseudomonas putida HB3267 14289834 YP_007230287.1 CDS B479_17260 NC_019905.1 3793202 3793873 R COG1476 Predicted transcriptional regulators; XRE family transcriptional regulator complement(3793202..3793873) Pseudomonas putida HB3267 14289835 YP_007230288.1 CDS B479_17265 NC_019905.1 3793972 3794625 R COG1396 Predicted transcriptional regulators; XRE family transcriptional regulator complement(3793972..3794625) Pseudomonas putida HB3267 14289836 YP_007230289.1 CDS B479_17270 NC_019905.1 3794756 3795067 D hypothetical protein 3794756..3795067 Pseudomonas putida HB3267 14289837 YP_007230290.1 CDS B479_17275 NC_019905.1 3795506 3796021 D COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; sigma-70 region 4 type 2 3795506..3796021 Pseudomonas putida HB3267 14289838 YP_007230291.1 CDS B479_17280 NC_019905.1 3796075 3797265 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(3796075..3797265) Pseudomonas putida HB3267 14289839 YP_007230292.1 CDS B479_17285 NC_019905.1 3797505 3798425 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(3797505..3798425) Pseudomonas putida HB3267 14289840 YP_007230293.1 CDS B479_17290 NC_019905.1 3798624 3799373 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); putative short-chain type regulator 3798624..3799373 Pseudomonas putida HB3267 14289841 YP_007230294.1 CDS B479_17295 NC_019905.1 3799449 3800747 D COG0477 Permeases of the major facilitator superfamily; MFS transporter 3799449..3800747 Pseudomonas putida HB3267 14289842 YP_007230295.1 CDS B479_17300 NC_019905.1 3800771 3801619 D COG3959 Transketolase, N-terminal subunit; transketolase 3800771..3801619 Pseudomonas putida HB3267 14289843 YP_007230296.1 CDS B479_17305 NC_019905.1 3801616 3802614 D COG3958 Transketolase, C-terminal subunit; putative transketolase, C-terminal subunit 3801616..3802614 Pseudomonas putida HB3267 14289844 YP_007230297.1 CDS B479_17310 NC_019905.1 3802782 3803516 R COG1126 ABC-type polar amino acid transport system, ATPase component; ABC transporter-like protein complement(3802782..3803516) Pseudomonas putida HB3267 14289845 YP_007230298.1 CDS B479_17315 NC_019905.1 3803503 3804150 R COG0765 ABC-type amino acid transport system, permease component; polar amino acid ABC transporter inner membrane subunit complement(3803503..3804150) Pseudomonas putida HB3267 14289846 YP_007230299.1 CDS B479_17320 NC_019905.1 3804151 3804816 R COG0765 ABC-type amino acid transport system, permease component; polar amino acid ABC transporter inner membrane subunit complement(3804151..3804816) Pseudomonas putida HB3267 14289847 YP_007230300.1 CDS B479_17325 NC_019905.1 3804839 3805624 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter periplasmic amino acid-binding protein complement(3804839..3805624) Pseudomonas putida HB3267 14289848 YP_007230301.1 CDS B479_17330 NC_019905.1 3805887 3806573 D COG2186 Transcriptional regulators; GntR family transcriptional regulator 3805887..3806573 Pseudomonas putida HB3267 14289849 YP_007230302.1 CDS B479_17335 NC_019905.1 3806736 3807047 D hypothetical protein 3806736..3807047 Pseudomonas putida HB3267 14289850 YP_007230303.1 CDS B479_17340 NC_019905.1 3807350 3809464 D COG2199 FOG: GGDEF domain; GAF and PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3807350..3809464 Pseudomonas putida HB3267 14289851 YP_007230304.1 CDS B479_17345 NC_019905.1 3809461 3811050 D COG2202 FOG: PAS/PAC domain; Pas/Pac sensor-containing chemotaxis sensory transducer 3809461..3811050 Pseudomonas putida HB3267 14289852 YP_007230305.1 CDS B479_17350 NC_019905.1 3811081 3814653 R COG3523 Uncharacterized protein conserved in bacteria; ImcF domain-containing protein complement(3811081..3814653) Pseudomonas putida HB3267 14289853 YP_007230306.1 CDS B479_17355 NC_019905.1 3814664 3816154 R COG3515 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3814664..3816154) Pseudomonas putida HB3267 14289854 YP_007230307.1 CDS B479_17360 NC_019905.1 3816142 3816774 R hypothetical protein complement(3816142..3816774) Pseudomonas putida HB3267 14289855 YP_007230308.1 CDS B479_17365 NC_019905.1 3817075 3817578 D COG3516 Uncharacterized protein conserved in bacteria; hypothetical protein 3817075..3817578 Pseudomonas putida HB3267 14289856 YP_007230309.1 CDS B479_17370 NC_019905.1 3817596 3819086 D COG3517 Uncharacterized protein conserved in bacteria; hypothetical protein 3817596..3819086 Pseudomonas putida HB3267 14289857 YP_007230310.1 CDS B479_17375 NC_019905.1 3819083 3819307 D COG3522 Uncharacterized protein conserved in bacteria; type VI secretion protein 3819083..3819307 Pseudomonas putida HB3267 14289858 YP_007230311.1 CDS B479_17380 NC_019905.1 3819309 3820193 D COG3455 Uncharacterized protein conserved in bacteria; hypothetical protein 3819309..3820193 Pseudomonas putida HB3267 14289859 YP_007230312.1 CDS B479_17385 NC_019905.1 3820213 3820809 D hypothetical protein 3820213..3820809 Pseudomonas putida HB3267 14289860 YP_007230313.1 CDS B479_17390 NC_019905.1 3820990 3821244 D hypothetical protein 3820990..3821244 Pseudomonas putida HB3267 14289861 YP_007230314.1 CDS B479_17395 NC_019905.1 3821630 3822532 D COG3209 Rhs family protein; RHS family protein 3821630..3822532 Pseudomonas putida HB3267 14289862 YP_007230315.1 CDS B479_17400 NC_019905.1 3822542 3823069 D hypothetical protein 3822542..3823069 Pseudomonas putida HB3267 14289863 YP_007230316.1 CDS B479_17405 NC_019905.1 3825157 3825717 R COG0558 Phosphatidylglycerophosphate synthase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(3825157..3825717) Pseudomonas putida HB3267 14291755 YP_007230317.1 CDS uvrC NC_019905.1 3825750 3827573 R COG0322 Nuclease subunit of the excinuclease complex; excinuclease ABC subunit C complement(3825750..3827573) Pseudomonas putida HB3267 14289865 YP_007230318.1 CDS B479_17415 NC_019905.1 3827580 3828218 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; two component LuxR family transcriptional regulator complement(3827580..3828218) Pseudomonas putida HB3267 14289866 YP_007230319.1 CDS B479_17420 NC_019905.1 3828282 3828671 R COG1396 Predicted transcriptional regulators; XRE family transcriptional regulator complement(3828282..3828671) Pseudomonas putida HB3267 14289867 YP_007230320.1 CDS B479_17425 NC_019905.1 3828789 3829220 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; N-acetyltransferase GCN5 complement(3828789..3829220) Pseudomonas putida HB3267 14289868 YP_007230321.1 CDS B479_17430 NC_019905.1 3829363 3829749 R COG3189 Uncharacterized conserved protein; hypothetical protein complement(3829363..3829749) Pseudomonas putida HB3267 14289869 YP_007230322.1 CDS B479_17435 NC_019905.1 3829878 3831494 D COG0306 Phosphate/sulphate permeases; phosphate transporter 3829878..3831494 Pseudomonas putida HB3267 14289870 YP_007230323.1 CDS B479_17440 NC_019905.1 3831631 3832326 R COG0625 Glutathione S-transferase; glutathione S-transferase domain-containing protein complement(3831631..3832326) Pseudomonas putida HB3267 14289871 YP_007230324.1 CDS B479_17445 NC_019905.1 3832414 3832911 R COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; hypothetical protein complement(3832414..3832911) Pseudomonas putida HB3267 14289872 YP_007230325.1 CDS B479_17450 NC_019905.1 3832973 3834355 R COG1113 Gamma-aminobutyrate permease and related permeases; amino acid permease-associated protein complement(3832973..3834355) Pseudomonas putida HB3267 14289873 YP_007230326.1 CDS B479_17455 NC_019905.1 3834611 3835507 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 3834611..3835507 Pseudomonas putida HB3267 14289874 YP_007230327.1 CDS B479_17460 NC_019905.1 3835744 3836994 D COG0160 4-aminobutyrate aminotransferase and related aminotransferases; class III aminotransferase 3835744..3836994 Pseudomonas putida HB3267 14289875 YP_007230328.1 CDS B479_17465 NC_019905.1 3836998 3837300 R hypothetical protein complement(3836998..3837300) Pseudomonas putida HB3267 14289876 YP_007230329.1 CDS B479_17470 NC_019905.1 3837546 3837971 D hypothetical protein 3837546..3837971 Pseudomonas putida HB3267 14289877 YP_007230330.1 CDS B479_17475 NC_019905.1 3838045 3840156 D COG0480 Translation elongation factors (GTPases); elongation factor G 3838045..3840156 Pseudomonas putida HB3267 14289878 YP_007230331.1 CDS B479_17480 NC_019905.1 3840269 3841711 R COG0659 Sulfate permease and related transporters (MFS superfamily); sulfate transporter complement(3840269..3841711) Pseudomonas putida HB3267 14289879 YP_007230332.1 CDS B479_17485 NC_019905.1 3841846 3842610 D COG1450 Type II secretory pathway, component PulD; NolW domain-containing protein 3841846..3842610 Pseudomonas putida HB3267 14289880 YP_007230333.1 CDS B479_17490 NC_019905.1 3843100 3844425 D COG2224 Isocitrate lyase; isocitrate lyase 3843100..3844425 Pseudomonas putida HB3267 14289881 YP_007230334.1 CDS B479_17495 NC_019905.1 3844655 3844918 R hypothetical protein complement(3844655..3844918) Pseudomonas putida HB3267 14289882 YP_007230335.1 CDS B479_17500 NC_019905.1 3845075 3845317 R hypothetical protein complement(3845075..3845317) Pseudomonas putida HB3267 14289883 YP_007230336.1 CDS B479_17505 NC_019905.1 3845842 3846504 D COG3714 Predicted membrane protein; hypothetical protein 3845842..3846504 Pseudomonas putida HB3267 14289884 YP_007230337.1 CDS B479_17510 NC_019905.1 3846888 3847301 D COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); NADH:ubiquinone oxidoreductase subunit A 3846888..3847301 Pseudomonas putida HB3267 14289885 YP_007230338.1 CDS B479_17515 NC_019905.1 3847311 3847988 D COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases; NADH dehydrogenase subunit B 3847311..3847988 Pseudomonas putida HB3267 14289886 YP_007230339.1 CDS B479_17520 NC_019905.1 3848067 3849848 D COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 3848067..3849848 Pseudomonas putida HB3267 14289887 YP_007230340.1 CDS B479_17525 NC_019905.1 3849851 3850348 D COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; NADH dehydrogenase subunit E 3849851..3850348 Pseudomonas putida HB3267 14289888 YP_007230341.1 CDS B479_17530 NC_019905.1 3850345 3851724 D COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; NADH dehydrogenase I subunit F 3850345..3851724 Pseudomonas putida HB3267 14289889 YP_007230342.1 CDS B479_17535 NC_019905.1 3851857 3854571 D COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); NADH dehydrogenase subunit G 3851857..3854571 Pseudomonas putida HB3267 14289890 YP_007230343.1 CDS B479_17540 NC_019905.1 3854568 3855575 D COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); NADH:ubiquinone oxidoreductase subunit H 3854568..3855575 Pseudomonas putida HB3267 14289891 YP_007230344.1 CDS B479_17545 NC_019905.1 3855587 3856135 D COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); NADH dehydrogenase subunit I 3855587..3856135 Pseudomonas putida HB3267 14289892 YP_007230345.1 CDS B479_17550 NC_019905.1 3856146 3856646 D COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); NADH:ubiquinone oxidoreductase subunit J 3856146..3856646 Pseudomonas putida HB3267 14289893 YP_007230346.1 CDS B479_17555 NC_019905.1 3856650 3856958 D COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); NADH:ubiquinone oxidoreductase subunit K 3856650..3856958 Pseudomonas putida HB3267 14289894 YP_007230347.1 CDS B479_17560 NC_019905.1 3856955 3858808 D COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit; NADH:ubiquinone oxidoreductase subunit L 3856955..3858808 Pseudomonas putida HB3267 14289895 YP_007230348.1 CDS B479_17565 NC_019905.1 3858858 3860390 D COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); NADH:ubiquinone oxidoreductase subunit M 3858858..3860390 Pseudomonas putida HB3267 14289896 YP_007230349.1 CDS B479_17570 NC_019905.1 3860398 3861867 D COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); NADH:ubiquinone oxidoreductase subunit N 3860398..3861867 Pseudomonas putida HB3267 14289897 YP_007230350.1 CDS B479_17575 NC_019905.1 3861946 3862167 R hypothetical protein complement(3861946..3862167) Pseudomonas putida HB3267 14289898 YP_007230351.1 CDS B479_17580 NC_019905.1 3862410 3862802 D CI repressor 3862410..3862802 Pseudomonas putida HB3267 14289899 YP_007230352.1 CDS B479_17585 NC_019905.1 3862799 3863161 R hypothetical protein complement(3862799..3863161) Pseudomonas putida HB3267 14289900 YP_007230353.1 CDS B479_17590 NC_019905.1 3863154 3863501 R hypothetical protein complement(3863154..3863501) Pseudomonas putida HB3267 14289901 YP_007230354.1 CDS B479_17595 NC_019905.1 3863513 3863761 R COG2771 DNA-binding HTH domain-containing proteins; LuxR family transcriptional regulator complement(3863513..3863761) Pseudomonas putida HB3267 14289902 YP_007230355.1 CDS B479_17600 NC_019905.1 3863982 3866048 D COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent receptor 3863982..3866048 Pseudomonas putida HB3267 14289903 YP_007230356.1 CDS B479_17605 NC_019905.1 3866191 3866748 R COG0431 Predicted flavoprotein; NADPH-dependent FMN reductase complement(3866191..3866748) Pseudomonas putida HB3267 14289904 YP_007230357.1 CDS B479_17610 NC_019905.1 3866906 3867124 D hypothetical protein 3866906..3867124 Pseudomonas putida HB3267 14289905 YP_007230358.1 CDS B479_17615 NC_019905.1 3867108 3869357 R COG1982 Arginine/lysine/ornithine decarboxylases; lysine decarboxylase complement(3867108..3869357) Pseudomonas putida HB3267 14289906 YP_007230359.1 CDS B479_17620 NC_019905.1 3869624 3870382 R COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; DNA polymerase III subunit epsilon complement(3869624..3870382) Pseudomonas putida HB3267 14289907 YP_007230360.1 CDS rnhA NC_019905.1 3870434 3870880 R COG0328 Ribonuclease HI; ribonuclease H complement(3870434..3870880) Pseudomonas putida HB3267 14289908 YP_007230361.1 CDS B479_17630 NC_019905.1 3870894 3871667 R COG0500 SAM-dependent methyltransferases; hypothetical protein complement(3870894..3871667) Pseudomonas putida HB3267 14289909 YP_007230362.1 CDS B479_17635 NC_019905.1 3871753 3872532 D COG0491 Zn-dependent hydrolases, including glyoxylases; hydroxyacylglutathione hydrolase 3871753..3872532 Pseudomonas putida HB3267 14289910 YP_007230363.1 CDS B479_17640 NC_019905.1 3872633 3874063 D COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); MltD domain-containing protein 3872633..3874063 Pseudomonas putida HB3267 14289911 YP_007230364.1 CDS B479_17645 NC_019905.1 3874400 3876172 D COG4166 ABC-type oligopeptide transport system, periplasmic component; extracellular solute-binding protein 3874400..3876172 Pseudomonas putida HB3267 14289912 YP_007230365.1 CDS B479_17650 NC_019905.1 3876169 3878004 D COG4166 ABC-type oligopeptide transport system, periplasmic component; extracellular solute-binding protein 3876169..3878004 Pseudomonas putida HB3267 14289913 YP_007230366.1 CDS B479_17655 NC_019905.1 3878006 3879079 D COG4174 ABC-type uncharacterized transport system, permease component; binding-protein-dependent transport system inner membrane protein 3878006..3879079 Pseudomonas putida HB3267 14289914 YP_007230367.1 CDS B479_17660 NC_019905.1 3879081 3880100 D COG4239 ABC-type uncharacterized transport system, permease component; binding-protein-dependent transport system inner membrane protein 3879081..3880100 Pseudomonas putida HB3267 14289915 YP_007230368.1 CDS B479_17665 NC_019905.1 3880102 3881715 D COG4172 ABC-type uncharacterized transport system, duplicated ATPase component; ABC transporter ATP-binding protein 3880102..3881715 Pseudomonas putida HB3267 14289916 YP_007230369.1 CDS B479_17670 NC_019905.1 3882173 3882415 D hypothetical protein 3882173..3882415 Pseudomonas putida HB3267 14289917 YP_007230370.1 CDS B479_17675 NC_019905.1 3882572 3882835 D hypothetical protein 3882572..3882835 Pseudomonas putida HB3267 14289918 YP_007230371.1 CDS B479_17680 NC_019905.1 3883017 3883484 D excisionase 3883017..3883484 Pseudomonas putida HB3267 14289919 YP_007230372.1 CDS B479_17685 NC_019905.1 3883481 3884056 D hypothetical protein 3883481..3884056 Pseudomonas putida HB3267 14289920 YP_007230373.1 CDS B479_17690 NC_019905.1 3884271 3887201 D COG0160 4-aminobutyrate aminotransferase and related aminotransferases; hypothetical protein 3884271..3887201 Pseudomonas putida HB3267 14289921 YP_007230374.1 CDS B479_17695 NC_019905.1 3887331 3888236 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 3887331..3888236 Pseudomonas putida HB3267 14289922 YP_007230375.1 CDS B479_17700 NC_019905.1 3888359 3889318 D hypothetical protein 3888359..3889318 Pseudomonas putida HB3267 14289923 YP_007230376.1 CDS B479_17705 NC_019905.1 3889315 3892497 D hypothetical protein 3889315..3892497 Pseudomonas putida HB3267 14289924 YP_007230377.1 CDS B479_17710 NC_019905.1 3893391 3894086 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component transcriptional regulator complement(3893391..3894086) Pseudomonas putida HB3267 14289925 YP_007230378.1 CDS B479_17715 NC_019905.1 3894083 3896737 R COG2205 Osmosensitive K+ channel histidine kinase; osmosensitive K+ channel signal transduction histidine kinase complement(3894083..3896737) Pseudomonas putida HB3267 14289926 YP_007230379.1 CDS B479_17720 NC_019905.1 3896900 3897451 R COG2156 K+-transporting ATPase, c chain; potassium-transporting ATPase subunit C complement(3896900..3897451) Pseudomonas putida HB3267 14289927 YP_007230380.1 CDS B479_17725 NC_019905.1 3897462 3899516 R COG2216 High-affinity K+ transport system, ATPase chain B; potassium-transporting ATPase subunit B complement(3897462..3899516) Pseudomonas putida HB3267 14289928 YP_007230381.1 CDS B479_17730 NC_019905.1 3899526 3901220 R COG2060 K+-transporting ATPase, A chain; potassium-transporting ATPase subunit A complement(3899526..3901220) Pseudomonas putida HB3267 14289929 YP_007230382.1 CDS B479_17735 NC_019905.1 3901230 3901319 R K+-transporting ATPase F complement(3901230..3901319) Pseudomonas putida HB3267 14289930 YP_007230383.1 CDS B479_17740 NC_019905.1 3901559 3902611 R COG0628 Predicted permease; hypothetical protein complement(3901559..3902611) Pseudomonas putida HB3267 14289931 YP_007230384.1 CDS B479_17745 NC_019905.1 3902624 3903418 R hypothetical protein complement(3902624..3903418) Pseudomonas putida HB3267 14289932 YP_007230385.1 CDS B479_17750 NC_019905.1 3903528 3904382 R COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold protein complement(3903528..3904382) Pseudomonas putida HB3267 14289933 YP_007230386.1 CDS B479_17755 NC_019905.1 3904379 3905167 R COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta fold family hydrolase complement(3904379..3905167) Pseudomonas putida HB3267 14289934 YP_007230387.1 CDS B479_17760 NC_019905.1 3905403 3905861 R COG2062 Phosphohistidine phosphatase SixA; phosphohistidine phosphatase, SixA complement(3905403..3905861) Pseudomonas putida HB3267 14289935 YP_007230388.1 CDS B479_17765 NC_019905.1 3905858 3906205 R hypothetical protein complement(3905858..3906205) Pseudomonas putida HB3267 14289936 YP_007230389.1 CDS gpsA NC_019905.1 3906242 3907267 R COG0240 Glycerol-3-phosphate dehydrogenase; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(3906242..3907267) Pseudomonas putida HB3267 14289937 YP_007230390.1 CDS B479_17775 NC_019905.1 3907452 3909599 D COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent receptor plug 3907452..3909599 Pseudomonas putida HB3267 14289938 YP_007230391.1 CDS B479_17780 NC_019905.1 3909599 3910489 D COG2984 ABC-type uncharacterized transport system, periplasmic component; putative ABC transporter substrate-binding protein 3909599..3910489 Pseudomonas putida HB3267 14289939 YP_007230392.1 CDS B479_17785 NC_019905.1 3910486 3912417 D COG0642 Signal transduction histidine kinase; integral membrane sensor hybrid histidine kinase 3910486..3912417 Pseudomonas putida HB3267 14289940 YP_007230393.1 CDS B479_17790 NC_019905.1 3912625 3913140 D COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 3912625..3913140 Pseudomonas putida HB3267 14289941 YP_007230394.1 CDS B479_17795 NC_019905.1 3913152 3914372 D COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-(acyl carrier protein) synthase I 3913152..3914372 Pseudomonas putida HB3267 14289942 YP_007230395.1 CDS B479_17800 NC_019905.1 3914467 3915471 R amidohydrolase 2 complement(3914467..3915471) Pseudomonas putida HB3267 14289943 YP_007230396.1 CDS B479_17805 NC_019905.1 3915589 3916452 D COG1741 Pirin-related protein; pirin domain-containing protein 3915589..3916452 Pseudomonas putida HB3267 14289944 YP_007230397.1 CDS B479_17810 NC_019905.1 3916582 3917307 R COG0412 Dienelactone hydrolase and related enzymes; dienelactone hydrolase complement(3916582..3917307) Pseudomonas putida HB3267 14289945 YP_007230398.1 CDS B479_17815 NC_019905.1 3917387 3919291 R COG0326 Molecular chaperone, HSP90 family; heat shock protein 90 complement(3917387..3919291) Pseudomonas putida HB3267 14289946 YP_007230399.1 CDS B479_17820 NC_019905.1 3919363 3919845 R COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; thioesterase superfamily protein complement(3919363..3919845) Pseudomonas putida HB3267 14289947 YP_007230400.1 CDS B479_17825 NC_019905.1 3919842 3920318 R COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; thioesterase superfamily protein complement(3919842..3920318) Pseudomonas putida HB3267 14289948 YP_007230401.1 CDS B479_17830 NC_019905.1 3920473 3920766 D lipoprotein 3920473..3920766 Pseudomonas putida HB3267 14289949 YP_007230402.1 CDS B479_17835 NC_019905.1 3920834 3921583 R COG3821 Predicted membrane protein; hypothetical protein complement(3920834..3921583) Pseudomonas putida HB3267 14289950 YP_007230403.1 CDS B479_17840 NC_019905.1 3921879 3923192 R COG1114 Branched-chain amino acid permeases; branched-chain amino acid transport system II carrier protein complement(3921879..3923192) Pseudomonas putida HB3267 14289951 YP_007230404.1 CDS B479_17845 NC_019905.1 3923676 3924560 R COG0074 Succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha complement(3923676..3924560) Pseudomonas putida HB3267 14289952 YP_007230405.1 CDS sucC NC_019905.1 3924560 3925726 R COG0045 Succinyl-CoA synthetase, beta subunit; succinyl-CoA synthetase subunit beta complement(3924560..3925726) Pseudomonas putida HB3267 14289953 YP_007230406.1 CDS B479_17855 NC_019905.1 3925899 3927335 R COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; dihydrolipoamide dehydrogenase complement(3925899..3927335) Pseudomonas putida HB3267 14289954 YP_007230407.1 CDS B479_17860 NC_019905.1 3927429 3928649 R COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; dihydrolipoamide succinyltransferase complement(3927429..3928649) Pseudomonas putida HB3267 14289955 YP_007230408.1 CDS sucA NC_019905.1 3928692 3931523 R COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes; 2-oxoglutarate dehydrogenase E1 component complement(3928692..3931523) Pseudomonas putida HB3267 14289956 YP_007230409.1 CDS sdhB NC_019905.1 3931769 3932473 R COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; succinate dehydrogenase iron-sulfur subunit complement(3931769..3932473) Pseudomonas putida HB3267 14289957 YP_007230410.1 CDS sdhA NC_019905.1 3932485 3934257 R COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; succinate dehydrogenase flavoprotein subunit complement(3932485..3934257) Pseudomonas putida HB3267 14289958 YP_007230411.1 CDS B479_17880 NC_019905.1 3934261 3934629 R COG2142 Succinate dehydrogenase, hydrophobic anchor subunit; succinate dehydrogenase, hydrophobic membrane anchor protein complement(3934261..3934629) Pseudomonas putida HB3267 14289959 YP_007230412.1 CDS B479_17885 NC_019905.1 3934623 3934997 R COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit; succinate dehydrogenase, cytochrome b556 subunit complement(3934623..3934997) Pseudomonas putida HB3267 14289960 YP_007230413.1 CDS gltA NC_019905.1 3935362 3936651 D COG0372 Citrate synthase; type II citrate synthase 3935362..3936651 Pseudomonas putida HB3267 14289961 YP_007230414.1 CDS B479_17895 NC_019905.1 3936766 3937371 R lipid-binding START domain-containing protein complement(3936766..3937371) Pseudomonas putida HB3267 14289962 YP_007230415.1 CDS B479_17900 NC_019905.1 3937790 3938281 R hypothetical protein complement(3937790..3938281) Pseudomonas putida HB3267 14289963 YP_007230416.1 CDS B479_17905 NC_019905.1 3938345 3939787 R COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; GntR family transcriptional regulator complement(3938345..3939787) Pseudomonas putida HB3267 14289964 YP_007230417.1 CDS B479_17910 NC_019905.1 3940077 3940889 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; OmpA/MotB domain-containing protein complement(3940077..3940889) Pseudomonas putida HB3267 14289965 YP_007230418.1 CDS B479_17915 NC_019905.1 3940886 3941239 R lipoprotein complement(3940886..3941239) Pseudomonas putida HB3267 14289966 YP_007230419.1 CDS B479_17920 NC_019905.1 3941249 3942070 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; hypothetical protein complement(3941249..3942070) Pseudomonas putida HB3267 14289967 YP_007230420.1 CDS B479_17925 NC_019905.1 3942148 3943077 R COG2025 Electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha complement(3942148..3943077) Pseudomonas putida HB3267 14289968 YP_007230421.1 CDS B479_17930 NC_019905.1 3943078 3943827 R COG2086 Electron transfer flavoprotein, beta subunit; Electron transfer flavoprotein subunit beta complement(3943078..3943827) Pseudomonas putida HB3267 14289969 YP_007230422.1 CDS B479_17935 NC_019905.1 3944384 3946048 D COG0644 Dehydrogenases (flavoproteins); electron-transferring-flavoprotein dehydrogenase 3944384..3946048 Pseudomonas putida HB3267 14289970 YP_007230423.1 CDS B479_17940 NC_019905.1 3946231 3947556 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily permease complement(3946231..3947556) Pseudomonas putida HB3267 14289971 YP_007230424.1 CDS B479_17945 NC_019905.1 3947629 3948108 R COG0784 FOG: CheY-like receiver; hypothetical protein complement(3947629..3948108) Pseudomonas putida HB3267 14289972 YP_007230425.1 CDS B479_17950 NC_019905.1 3948277 3948753 R COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; RNA polymerase sigma factor complement(3948277..3948753) Pseudomonas putida HB3267 14289973 YP_007230426.1 CDS B479_17955 NC_019905.1 3948988 3950160 D COG0845 Membrane-fusion protein; RND family efflux transporter, MFP subunit 3948988..3950160 Pseudomonas putida HB3267 14289974 YP_007230427.1 CDS B479_17960 NC_019905.1 3950161 3952125 D COG1136 ABC-type antimicrobial peptide transport system, ATPase component; macrolide transporter ATP-binding /permease protein 3950161..3952125 Pseudomonas putida HB3267 14289975 YP_007230428.1 CDS B479_17965 NC_019905.1 3952129 3953547 D COG1538 Outer membrane protein; RND efflux system outer membrane lipoprotein 3952129..3953547 Pseudomonas putida HB3267 14289976 YP_007230429.1 CDS B479_17970 NC_019905.1 3953684 3955303 R hypothetical protein complement(3953684..3955303) Pseudomonas putida HB3267 14289977 YP_007230430.1 CDS B479_17975 NC_019905.1 3955650 3956996 D COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog; peptidase M19 3955650..3956996 Pseudomonas putida HB3267 14289978 YP_007230431.1 CDS B479_17980 NC_019905.1 3957014 3958300 D COG0520 Selenocysteine lyase; class V aminotransferase 3957014..3958300 Pseudomonas putida HB3267 14289979 YP_007230432.1 CDS B479_17985 NC_019905.1 3958434 3959402 R COG0657 Esterase/lipase; alpha/beta hydrolase domain-containing protein complement(3958434..3959402) Pseudomonas putida HB3267 14289980 YP_007230433.1 CDS B479_17990 NC_019905.1 3959545 3960666 D COG3255 Putative sterol carrier protein; transcription factor jumonji domain-containing protein 3959545..3960666 Pseudomonas putida HB3267 14289981 YP_007230434.1 CDS B479_17995 NC_019905.1 3960808 3962199 R COG0160 4-aminobutyrate aminotransferase and related aminotransferases; diaminobutyrate--2-oxoglutarate aminotransferase complement(3960808..3962199) Pseudomonas putida HB3267 14289982 YP_007230435.1 CDS B479_18000 NC_019905.1 3962417 3963739 R COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(3962417..3963739) Pseudomonas putida HB3267 14289983 YP_007230436.1 CDS B479_18005 NC_019905.1 3963736 3964419 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component transcriptional regulator complement(3963736..3964419) Pseudomonas putida HB3267 14289984 YP_007230437.1 CDS B479_18010 NC_019905.1 3964717 3966063 D hypothetical protein 3964717..3966063 Pseudomonas putida HB3267 14289985 YP_007230438.1 CDS B479_18015 NC_019905.1 3966083 3966694 D COG5620 Uncharacterized conserved protein; hypothetical protein 3966083..3966694 Pseudomonas putida HB3267 14289986 YP_007230439.1 CDS B479_18020 NC_019905.1 3966717 3967343 D COG5620 Uncharacterized conserved protein; GAD-like domain-containing protein 3966717..3967343 Pseudomonas putida HB3267 14289987 YP_007230440.1 CDS B479_18025 NC_019905.1 3967360 3967926 R COG2068 Uncharacterized MobA-related protein; MobA-like protein complement(3967360..3967926) Pseudomonas putida HB3267 14289988 YP_007230441.1 CDS B479_18030 NC_019905.1 3967923 3968894 R COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; hypothetical protein complement(3967923..3968894) Pseudomonas putida HB3267 14289989 YP_007230442.1 CDS B479_18035 NC_019905.1 3968898 3970109 R COG2010 Cytochrome c, mono- and diheme variants; gluconate 2-dehydrogenase complement(3968898..3970109) Pseudomonas putida HB3267 14289990 YP_007230443.1 CDS B479_18040 NC_019905.1 3970112 3970648 R COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; (2Fe-2S)-binding domain-containing protein subunit complement(3970112..3970648) Pseudomonas putida HB3267 14289991 YP_007230444.1 CDS B479_18045 NC_019905.1 3970641 3973472 R COG1070 Sugar (pentulose and hexulose) kinases; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein complement(3970641..3973472) Pseudomonas putida HB3267 14289992 YP_007230445.1 CDS B479_18050 NC_019905.1 3973842 3975557 D COG4232 Thiol:disulfide interchange protein; protein-disulfide reductase 3973842..3975557 Pseudomonas putida HB3267 14289993 YP_007230446.1 CDS B479_18055 NC_019905.1 3975557 3976393 D COG0682 Prolipoprotein diacylglyceryltransferase; redoxin domain-containing protein 3975557..3976393 Pseudomonas putida HB3267 14289994 YP_007230447.1 CDS dsbG NC_019905.1 3976395 3977153 D COG1651 Protein-disulfide isomerase; disulfide isomerase/thiol-disulfide oxidase 3976395..3977153 Pseudomonas putida HB3267 14289995 YP_007230448.1 CDS B479_18065 NC_019905.1 3977915 3978622 D hypothetical protein 3977915..3978622 Pseudomonas putida HB3267 14289996 YP_007230449.1 CDS B479_18070 NC_019905.1 3978624 3979352 D COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter-like protein 3978624..3979352 Pseudomonas putida HB3267 14289997 YP_007230450.1 CDS B479_18075 NC_019905.1 3979566 3992519 R COG1020 Non-ribosomal peptide synthetase modules and related proteins; peptide synthase complement(3979566..3992519) Pseudomonas putida HB3267 14289998 YP_007230451.1 CDS B479_18080 NC_019905.1 3992982 3993512 D COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; extracytoplasmic-function sigma-70 factor 3992982..3993512 Pseudomonas putida HB3267 14289999 YP_007230452.1 CDS B479_18085 NC_019905.1 3993566 3994579 R COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; siderophore biosynthesis protein complement(3993566..3994579) Pseudomonas putida HB3267 14290000 YP_007230453.1 CDS B479_18090 NC_019905.1 3994643 3995443 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Periplasmic binding protein complement(3994643..3995443) Pseudomonas putida HB3267 14290001 YP_007230454.1 CDS B479_18095 NC_019905.1 3995616 3996167 D COG5018 Inhibitor of the KinA pathway to sporulation, predicted exonuclease; exonuclease 3995616..3996167 Pseudomonas putida HB3267 14290002 YP_007230455.1 CDS B479_18100 NC_019905.1 3996243 3996527 D COG3123 Uncharacterized protein conserved in bacteria; hypothetical protein 3996243..3996527 Pseudomonas putida HB3267 14290003 YP_007230456.1 CDS B479_18105 NC_019905.1 3996834 3997526 R COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold; hypothetical protein complement(3996834..3997526) Pseudomonas putida HB3267 14290004 YP_007230457.1 CDS B479_18110 NC_019905.1 3997577 3999001 D COG3278 Cbb3-type cytochrome oxidase, subunit 1; cbb3-type cytochrome c oxidase subunit I 3997577..3999001 Pseudomonas putida HB3267 14290005 YP_007230458.1 CDS B479_18115 NC_019905.1 3999015 3999623 D COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit; cbb3-type cytochrome c oxidase subunit II 3999015..3999623 Pseudomonas putida HB3267 14290006 YP_007230459.1 CDS B479_18120 NC_019905.1 3999629 3999823 D COG4736 Cbb3-type cytochrome oxidase, subunit 3; CcoQ_2 3999629..3999823 Pseudomonas putida HB3267 14290007 YP_007230460.1 CDS B479_18125 NC_019905.1 3999820 4000761 D COG2010 Cytochrome c, mono- and diheme variants; cbb3-type cytochrome c oxidase subunit III 3999820..4000761 Pseudomonas putida HB3267 14290008 YP_007230461.1 CDS B479_18130 NC_019905.1 4001222 4002664 D COG3278 Cbb3-type cytochrome oxidase, subunit 1; cbb3-type cytochrome c oxidase subunit I 4001222..4002664 Pseudomonas putida HB3267 14290009 YP_007230462.1 CDS B479_18135 NC_019905.1 4002664 4003272 D COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit; cbb3-type cytochrome c oxidase subunit II 4002664..4003272 Pseudomonas putida HB3267 14290010 YP_007230463.1 CDS B479_18140 NC_019905.1 4003278 4003475 D COG4736 Cbb3-type cytochrome oxidase, subunit 3; cbb3-type cytochrome c oxidase, CcoQ subunit 4003278..4003475 Pseudomonas putida HB3267 14290011 YP_007230464.1 CDS B479_18145 NC_019905.1 4003472 4004452 D COG2010 Cytochrome c, mono- and diheme variants; cbb3-type cytochrome c oxidase subunit III 4003472..4004452 Pseudomonas putida HB3267 14290012 YP_007230465.1 CDS B479_18150 NC_019905.1 4004712 4006127 D COG0348 Polyferredoxin; cbb3-type cytochrome c oxidase, accessory protein CcoG 4004712..4006127 Pseudomonas putida HB3267 14290013 YP_007230466.1 CDS B479_18155 NC_019905.1 4006143 4006667 D COG3198 Uncharacterized protein conserved in bacteria; hypothetical protein 4006143..4006667 Pseudomonas putida HB3267 14290014 YP_007230467.1 CDS B479_18160 NC_019905.1 4006823 4009297 D COG2217 Cation transport ATPase; heavy metal translocating P-type ATPase 4006823..4009297 Pseudomonas putida HB3267 14290015 YP_007230468.1 CDS B479_18165 NC_019905.1 4009276 4009491 D COG3197 Uncharacterized protein, possibly involved in nitrogen fixation; cbb3-type cytochrome oxidase maturation protein 4009276..4009491 Pseudomonas putida HB3267 14290016 YP_007230469.1 CDS B479_18170 NC_019905.1 4009484 4010167 D COG2836 Uncharacterized conserved protein; hypothetical protein 4009484..4010167 Pseudomonas putida HB3267 14290017 YP_007230470.1 CDS B479_18175 NC_019905.1 4010353 4011735 D COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase 4010353..4011735 Pseudomonas putida HB3267 14290018 YP_007230471.1 CDS B479_18180 NC_019905.1 4011920 4012654 D COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; Crp/FNR family transcriptional regulator 4011920..4012654 Pseudomonas putida HB3267 14290019 YP_007230472.1 CDS B479_18185 NC_019905.1 4012710 4013258 D COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins; adenine phosphoribosyltransferase 4012710..4013258 Pseudomonas putida HB3267 14290020 YP_007230473.1 CDS recR NC_019905.1 4013403 4014005 R COG0353 Recombinational DNA repair protein (RecF pathway); recombination protein RecR complement(4013403..4014005) Pseudomonas putida HB3267 14290021 YP_007230474.1 CDS B479_18195 NC_019905.1 4014295 4014630 R COG0718 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4014295..4014630) Pseudomonas putida HB3267 14290022 YP_007230475.1 CDS B479_18200 NC_019905.1 4014695 4016767 R COG2812 DNA polymerase III, gamma/tau subunits; DNA polymerase III subunits gamma and tau complement(4014695..4016767) Pseudomonas putida HB3267 14290023 YP_007230476.1 CDS B479_18205 NC_019905.1 4016891 4017658 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; extracellular solute-binding protein 4016891..4017658 Pseudomonas putida HB3267 14290024 YP_007230477.1 CDS B479_18210 NC_019905.1 4017840 4018115 R hypothetical protein complement(4017840..4018115) Pseudomonas putida HB3267 14290025 YP_007230478.1 CDS B479_18215 NC_019905.1 4018503 4018991 R hypothetical protein complement(4018503..4018991) Pseudomonas putida HB3267 14290026 YP_007230479.1 CDS B479_18220 NC_019905.1 4019074 4019496 D COG0789 Predicted transcriptional regulators; MerR family transcriptional regulator 4019074..4019496 Pseudomonas putida HB3267 14290027 YP_007230480.1 CDS B479_18225 NC_019905.1 4019634 4020059 D hypothetical protein 4019634..4020059 Pseudomonas putida HB3267 14290028 YP_007230481.1 CDS B479_18230 NC_019905.1 4020247 4020723 D hypothetical protein 4020247..4020723 Pseudomonas putida HB3267 14290029 YP_007230482.1 CDS ligA NC_019905.1 4021305 4023635 R COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase LigA complement(4021305..4023635) Pseudomonas putida HB3267 14290030 YP_007230483.1 CDS zipA NC_019905.1 4023874 4024764 R COG3115 Cell division protein; cell division protein ZipA complement(4023874..4024764) Pseudomonas putida HB3267 14290031 YP_007230484.1 CDS B479_18245 NC_019905.1 4024970 4028458 R COG1196 Chromosome segregation ATPases; chromosome segregation protein SMC complement(4024970..4028458) Pseudomonas putida HB3267 14290032 YP_007230485.1 CDS B479_18250 NC_019905.1 4028462 4029121 R COG1802 Transcriptional regulators; GntR family transcriptional regulator complement(4028462..4029121) Pseudomonas putida HB3267 14290033 YP_007230486.1 CDS B479_18255 NC_019905.1 4029390 4030844 D COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A; xanthine dehydrogenase small subunit 4029390..4030844 Pseudomonas putida HB3267 14290034 YP_007230487.1 CDS B479_18260 NC_019905.1 4030837 4033236 D COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B; xanthine dehydrogenase 4030837..4033236 Pseudomonas putida HB3267 14290035 YP_007230488.1 CDS B479_18265 NC_019905.1 4033408 4034253 D COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; putative xanthine dehydrogenase accessory factor XdhC 4033408..4034253 Pseudomonas putida HB3267 14290036 YP_007230489.1 CDS B479_18270 NC_019905.1 4034264 4035568 D COG0402 Cytosine deaminase and related metal-dependent hydrolases; guanine deaminase 4034264..4035568 Pseudomonas putida HB3267 14290037 YP_007230490.1 CDS B479_18275 NC_019905.1 4035565 4036257 R COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); aquaporin Z complement(4035565..4036257) Pseudomonas putida HB3267 14290038 YP_007230491.1 CDS B479_18280 NC_019905.1 4036498 4037253 R COG1802 Transcriptional regulators; GntR family transcriptional regulator complement(4036498..4037253) Pseudomonas putida HB3267 14290039 YP_007230492.1 CDS B479_18285 NC_019905.1 4037536 4038885 D COG2252 Permeases; xanthine/uracil/vitamin C permease 4037536..4038885 Pseudomonas putida HB3267 14290040 YP_007230493.1 CDS B479_18290 NC_019905.1 4038927 4039628 R COG3209 Rhs family protein; hypothetical protein complement(4038927..4039628) Pseudomonas putida HB3267 14290041 YP_007230494.1 CDS B479_18295 NC_019905.1 4039793 4040146 R COG2351 Transthyretin-like protein; hydroxyisourate hydrolase complement(4039793..4040146) Pseudomonas putida HB3267 14290042 YP_007230495.1 CDS B479_18300 NC_019905.1 4040545 4041471 D COG0726 Predicted xylanase/chitin deacetylase; polysaccharide deacetylase family protein 4040545..4041471 Pseudomonas putida HB3267 14290043 YP_007230496.1 CDS B479_18305 NC_019905.1 4041471 4041986 D COG3195 Uncharacterized protein conserved in bacteria; hypothetical protein 4041471..4041986 Pseudomonas putida HB3267 14290044 YP_007230497.1 CDS B479_18310 NC_019905.1 4042043 4042546 D COG3194 Ureidoglycolate hydrolase; ureidoglycolate hydrolase 4042043..4042546 Pseudomonas putida HB3267 14290045 YP_007230498.1 CDS B479_18315 NC_019905.1 4042606 4043934 D COG3748 Predicted membrane protein; hypothetical protein 4042606..4043934 Pseudomonas putida HB3267 14290046 YP_007230499.1 CDS B479_18320 NC_019905.1 4044160 4045515 D COG2233 Xanthine/uracil permeases; xanthine/uracil permease family protein 4044160..4045515 Pseudomonas putida HB3267 14290047 YP_007230500.1 CDS B479_18325 NC_019905.1 4045656 4046441 D COG3248 Nucleoside-binding outer membrane protein; hypothetical protein 4045656..4046441 Pseudomonas putida HB3267 14290048 YP_007230501.1 CDS B479_18330 NC_019905.1 4046793 4047575 D COG3248 Nucleoside-binding outer membrane protein; nucleoside-binding outer membrane protein-like protein 4046793..4047575 Pseudomonas putida HB3267 14290049 YP_007230502.1 CDS B479_18335 NC_019905.1 4047713 4048627 R COG2354 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4047713..4048627) Pseudomonas putida HB3267 14290050 YP_007230503.1 CDS B479_18340 NC_019905.1 4048760 4049371 D COG1309 Transcriptional regulator; TetR family transcriptional regulator 4048760..4049371 Pseudomonas putida HB3267 14290051 YP_007230504.1 CDS B479_18345 NC_019905.1 4049511 4049951 R COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol; hypothetical protein complement(4049511..4049951) Pseudomonas putida HB3267 14290052 YP_007230505.1 CDS B479_18350 NC_019905.1 4050209 4051984 D COG3960 Glyoxylate carboligase; glyoxylate carboligase 4050209..4051984 Pseudomonas putida HB3267 14290053 YP_007230506.1 CDS B479_18355 NC_019905.1 4052053 4052835 D COG3622 Hydroxypyruvate isomerase; hydroxypyruvate isomerase 4052053..4052835 Pseudomonas putida HB3267 14290054 YP_007230507.1 CDS B479_18360 NC_019905.1 4052910 4053803 D COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; 2-hydroxy-3-oxopropionate reductase 4052910..4053803 Pseudomonas putida HB3267 14290055 YP_007230508.1 CDS B479_18365 NC_019905.1 4054062 4055336 D COG2379 Putative glycerate kinase; hydroxypyruvate reductase 4054062..4055336 Pseudomonas putida HB3267 14290056 YP_007230509.1 CDS B479_18370 NC_019905.1 4055333 4056748 D COG0469 Pyruvate kinase; pyruvate kinase 4055333..4056748 Pseudomonas putida HB3267 14290057 YP_007230510.1 CDS B479_18375 NC_019905.1 4056961 4057836 D COG4413 Urea transporter; Urea transporter 4056961..4057836 Pseudomonas putida HB3267 14290058 YP_007230511.1 CDS B479_18380 NC_019905.1 4057852 4058673 R COG3209 Rhs family protein; hypothetical protein complement(4057852..4058673) Pseudomonas putida HB3267 14290059 YP_007230512.1 CDS B479_18385 NC_019905.1 4058832 4059653 D COG1226 Kef-type K+ transport systems, predicted NAD-binding component; ion transport protein 4058832..4059653 Pseudomonas putida HB3267 14290060 YP_007230513.1 CDS B479_18390 NC_019905.1 4059870 4060871 D COG1613 ABC-type sulfate transport system, periplasmic component; sulfate ABC transporter substrate-binding protein 4059870..4060871 Pseudomonas putida HB3267 14290061 YP_007230514.1 CDS B479_18395 NC_019905.1 4060996 4061925 R COG1092 Predicted SAM-dependent methyltransferases; methyltransferase complement(4060996..4061925) Pseudomonas putida HB3267 14290062 YP_007230515.1 CDS B479_18400 NC_019905.1 4062169 4063068 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein complement(4062169..4063068) Pseudomonas putida HB3267 14290063 YP_007230516.1 CDS B479_18405 NC_019905.1 4063203 4063640 D COG1522 Transcriptional regulators; AsnC family transcriptional regulator 4063203..4063640 Pseudomonas putida HB3267 14290064 YP_007230517.1 CDS B479_18410 NC_019905.1 4064196 4065728 D COG1953 Cytosine/uracil/thiamine/allantoin permeases; cytosine/purines uracil thiamine allantoin permease 4064196..4065728 Pseudomonas putida HB3267 14290065 YP_007230518.1 CDS B479_18415 NC_019905.1 4065745 4066473 D COG4126 Hydantoin racemase; Asp/Glu/hydantoin racemase 4065745..4066473 Pseudomonas putida HB3267 14290066 YP_007230519.1 CDS B479_18420 NC_019905.1 4066612 4067274 R hypothetical protein complement(4066612..4067274) Pseudomonas putida HB3267 14290067 YP_007230520.1 CDS B479_18425 NC_019905.1 4067513 4067662 R hypothetical protein complement(4067513..4067662) Pseudomonas putida HB3267 14290068 YP_007230521.1 CDS B479_18430 NC_019905.1 4067977 4068315 R COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; FKBP-type peptidylprolyl isomerase complement(4067977..4068315) Pseudomonas putida HB3267 14290069 YP_007230522.1 CDS B479_18435 NC_019905.1 4068428 4068835 R COG3791 Uncharacterized conserved protein; glutathione-dependent formaldehyde-activating protein complement(4068428..4068835) Pseudomonas putida HB3267 14290070 YP_007230523.1 CDS B479_18440 NC_019905.1 4069010 4069798 R COG0384 Predicted epimerase, PhzC/PhzF homolog; PhzF family phenazine biosynthesis protein complement(4069010..4069798) Pseudomonas putida HB3267 14290071 YP_007230524.1 CDS B479_18445 NC_019905.1 4069849 4070787 R COG1052 Lactate dehydrogenase and related dehydrogenases; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(4069849..4070787) Pseudomonas putida HB3267 14290072 YP_007230525.1 CDS B479_18450 NC_019905.1 4071169 4071585 R hypothetical protein complement(4071169..4071585) Pseudomonas putida HB3267 14290073 YP_007230526.1 CDS B479_18455 NC_019905.1 4071598 4072788 R COG4235 Cytochrome c biogenesis factor; cytochrome c-type biogenesis protein complement(4071598..4072788) Pseudomonas putida HB3267 14290074 YP_007230527.1 CDS B479_18460 NC_019905.1 4072781 4073269 R COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes; cytochrome C biogenesis protein complement(4072781..4073269) Pseudomonas putida HB3267 14290075 YP_007230528.1 CDS B479_18465 NC_019905.1 4073266 4073802 R COG0526 Thiol-disulfide isomerase and thioredoxins; periplasmic protein thiol-disulfide oxidoreductase DsbE complement(4073266..4073802) Pseudomonas putida HB3267 14290076 YP_007230529.1 CDS B479_18470 NC_019905.1 4073799 4075772 R COG1138 Cytochrome c biogenesis factor; cytochrome c-type biogenesis protein CcmF complement(4073799..4075772) Pseudomonas putida HB3267 14290077 YP_007230530.1 CDS B479_18475 NC_019905.1 4075784 4076239 R COG2332 Cytochrome c-type biogenesis protein CcmE; cytochrome c-type biogenesis protein CcmE complement(4075784..4076239) Pseudomonas putida HB3267 14290078 YP_007230531.1 CDS B479_18480 NC_019905.1 4076236 4076412 R COG3114 Heme exporter protein D; heme exporter protein CcmD complement(4076236..4076412) Pseudomonas putida HB3267 14290079 YP_007230532.1 CDS B479_18485 NC_019905.1 4076409 4077176 R COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component; heme exporter protein CcmC complement(4076409..4077176) Pseudomonas putida HB3267 14290080 YP_007230533.1 CDS B479_18490 NC_019905.1 4077223 4077891 R COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component; heme exporter protein CcmB complement(4077223..4077891) Pseudomonas putida HB3267 14290081 YP_007230534.1 CDS B479_18495 NC_019905.1 4077888 4078520 R COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component; cytochrome c biogenesis protein CcmA complement(4077888..4078520) Pseudomonas putida HB3267 14290082 YP_007230535.1 CDS B479_18500 NC_019905.1 4078787 4080343 D hypothetical protein 4078787..4080343 Pseudomonas putida HB3267 14290083 YP_007230536.1 CDS B479_18505 NC_019905.1 4080340 4080684 D COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB; hypothetical protein 4080340..4080684 Pseudomonas putida HB3267 14290084 YP_007230537.1 CDS B479_18510 NC_019905.1 4080775 4081746 D COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; AraC family transcriptional regulator 4080775..4081746 Pseudomonas putida HB3267 14290085 YP_007230538.1 CDS B479_18515 NC_019905.1 4081759 4082685 R COG1073 Hydrolases of the alpha/beta superfamily; hypothetical protein complement(4081759..4082685) Pseudomonas putida HB3267 14290086 YP_007230539.1 CDS B479_18520 NC_019905.1 4082757 4082984 R hypothetical protein complement(4082757..4082984) Pseudomonas putida HB3267 14290087 YP_007230540.1 CDS B479_18525 NC_019905.1 4082977 4084242 R COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; O-succinylhomoserine sulfhydrylase complement(4082977..4084242) Pseudomonas putida HB3267 14290088 YP_007230541.1 CDS B479_18530 NC_019905.1 4084293 4085522 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(4084293..4085522) Pseudomonas putida HB3267 14290089 YP_007230542.1 CDS B479_18535 NC_019905.1 4085546 4086268 R pyrroloquinoline quinone (coenzyme pqq) biosynthesis protein c complement(4085546..4086268) Pseudomonas putida HB3267 14290090 YP_007230543.1 CDS B479_18540 NC_019905.1 4086342 4086917 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; putative acetyl-transferase complement(4086342..4086917) Pseudomonas putida HB3267 14290091 YP_007230544.1 CDS B479_18545 NC_019905.1 4087151 4089904 D hypothetical protein 4087151..4089904 Pseudomonas putida HB3267 14290092 YP_007230545.1 CDS B479_18550 NC_019905.1 4089901 4092765 D COG3774 Mannosyltransferase OCH1 and related enzymes; hypothetical protein 4089901..4092765 Pseudomonas putida HB3267 14290093 YP_007230546.1 CDS B479_18555 NC_019905.1 4092822 4093217 R hypothetical protein complement(4092822..4093217) Pseudomonas putida HB3267 14290094 YP_007230547.1 CDS B479_18560 NC_019905.1 4093219 4093698 R COG0835 Chemotaxis signal transduction protein; chemotaxis protein CheW complement(4093219..4093698) Pseudomonas putida HB3267 14290095 YP_007230548.1 CDS B479_18565 NC_019905.1 4093740 4094633 R COG0835 Chemotaxis signal transduction protein; putative CheW protein complement(4093740..4094633) Pseudomonas putida HB3267 14290096 YP_007230549.1 CDS B479_18570 NC_019905.1 4094633 4095421 R COG1192 ATPases involved in chromosome partitioning; cobyrinic acid a,c-diamide synthase complement(4094633..4095421) Pseudomonas putida HB3267 14290097 YP_007230550.1 CDS B479_18575 NC_019905.1 4095638 4096495 R COG1360 Flagellar motor protein; flagellar motor protein MotD complement(4095638..4096495) Pseudomonas putida HB3267 14290098 YP_007230551.1 CDS motC NC_019905.1 4096499 4097239 R COG1291 Flagellar motor component; flagellar motor protein complement(4096499..4097239) Pseudomonas putida HB3267 14290099 YP_007230552.1 CDS B479_18585 NC_019905.1 4097239 4098366 R COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; chemotaxis-specific protein-glutamate methyltransferase complement(4097239..4098366) Pseudomonas putida HB3267 14290100 YP_007230553.1 CDS B479_18590 NC_019905.1 4098413 4100653 R COG0643 Chemotaxis protein histidine kinase and related kinases; CheA signal transduction histidine kinase complement(4098413..4100653) Pseudomonas putida HB3267 14290101 YP_007230554.1 CDS B479_18595 NC_019905.1 4100666 4101454 R COG3143 Chemotaxis protein; chemotaxis phosphatase, CheZ complement(4100666..4101454) Pseudomonas putida HB3267 14290102 YP_007230555.1 CDS B479_18600 NC_019905.1 4101475 4101861 R COG0784 FOG: CheY-like receiver; response regulator receiver protein complement(4101475..4101861) Pseudomonas putida HB3267 14290103 YP_007230556.1 CDS fliA NC_019905.1 4101953 4102693 R COG1191 DNA-directed RNA polymerase specialized sigma subunit; flagellar biosynthesis sigma factor complement(4101953..4102693) Pseudomonas putida HB3267 14290104 YP_007230557.1 CDS B479_18610 NC_019905.1 4102690 4103523 R COG0455 ATPases involved in chromosome partitioning; protein FleN complement(4102690..4103523) Pseudomonas putida HB3267 14290105 YP_007230558.1 CDS flhF NC_019905.1 4103617 4104924 R COG1419 Flagellar GTP-binding protein; flagellar biosynthesis regulator FlhF complement(4103617..4104924) Pseudomonas putida HB3267 14290106 YP_007230559.1 CDS flhA NC_019905.1 4104936 4107065 R COG1298 Flagellar biosynthesis pathway, component FlhA; flagellar biosynthesis protein FlhA complement(4104936..4107065) Pseudomonas putida HB3267 14290107 YP_007230560.1 CDS flhB NC_019905.1 4107528 4108670 R COG1377 Flagellar biosynthesis pathway, component FlhB; flagellar biosynthesis protein FlhB complement(4107528..4108670) Pseudomonas putida HB3267 14290108 YP_007230561.1 CDS fliR NC_019905.1 4108673 4109449 R COG1684 Flagellar biosynthesis pathway, component FliR; flagellar biosynthesis protein FliR complement(4108673..4109449) Pseudomonas putida HB3267 14290109 YP_007230562.1 CDS fliQ NC_019905.1 4109457 4109726 R COG1987 Flagellar biosynthesis pathway, component FliQ; flagellar biosynthesis protein FliQ complement(4109457..4109726) Pseudomonas putida HB3267 14290110 YP_007230563.1 CDS fliP NC_019905.1 4109748 4110503 R COG1338 Flagellar biosynthesis pathway, component FliP; flagellar biosynthesis protein FliP complement(4109748..4110503) Pseudomonas putida HB3267 14290111 YP_007230564.1 CDS B479_18645 NC_019905.1 4110503 4110949 R COG3190 Flagellar biogenesis protein; flagellar protein FliO complement(4110503..4110949) Pseudomonas putida HB3267 14290112 YP_007230565.1 CDS fliN NC_019905.1 4110950 4111420 R COG1886 Flagellar motor switch/type III secretory pathway protein; flagellar motor switch protein complement(4110950..4111420) Pseudomonas putida HB3267 14290113 YP_007230566.1 CDS fliM NC_019905.1 4111468 4112436 R COG1868 Flagellar motor switch protein; flagellar motor switch protein FliM complement(4111468..4112436) Pseudomonas putida HB3267 14290114 YP_007230567.1 CDS fliL NC_019905.1 4112446 4112943 R COG1580 Flagellar basal body-associated protein; flagellar basal body-associated protein FliL complement(4112446..4112943) Pseudomonas putida HB3267 14290115 YP_007230568.1 CDS B479_18665 NC_019905.1 4113130 4114392 R COG3144 Flagellar hook-length control protein; flagellar hook-length control protein complement(4113130..4114392) Pseudomonas putida HB3267 14290116 YP_007230569.1 CDS B479_18670 NC_019905.1 4114465 4114803 R COG2198 FOG: HPt domain; Hpt protein complement(4114465..4114803) Pseudomonas putida HB3267 14290117 YP_007230570.1 CDS B479_18675 NC_019905.1 4114861 4116552 R COG0784 FOG: CheY-like receiver; response regulator receiver protein complement(4114861..4116552) Pseudomonas putida HB3267 14290118 YP_007230571.1 CDS B479_18680 NC_019905.1 4116561 4116866 R COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); anti-sigma-factor antagonist complement(4116561..4116866) Pseudomonas putida HB3267 14290119 YP_007230572.1 CDS fliJ NC_019905.1 4117111 4117563 R COG2882 Flagellar biosynthesis chaperone; flagellar biosynthesis chaperone complement(4117111..4117563) Pseudomonas putida HB3267 14290120 YP_007230573.1 CDS fliI NC_019905.1 4117570 4118928 R COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; flagellum-specific ATP synthase complement(4117570..4118928) Pseudomonas putida HB3267 14290121 YP_007230574.1 CDS fliH NC_019905.1 4118918 4119712 R COG1317 Flagellar biosynthesis/type III secretory pathway protein; flagellar assembly protein H complement(4118918..4119712) Pseudomonas putida HB3267 14290122 YP_007230575.1 CDS fliG NC_019905.1 4119814 4120833 R COG1536 Flagellar motor switch protein; flagellar motor switch protein G complement(4119814..4120833) Pseudomonas putida HB3267 14290123 YP_007230576.1 CDS fliF NC_019905.1 4120826 4122604 R COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; flagellar MS-ring protein complement(4120826..4122604) Pseudomonas putida HB3267 14290124 YP_007230577.1 CDS fliE NC_019905.1 4122620 4122952 R COG1677 Flagellar hook-basal body protein; flagellar hook-basal body protein FliE complement(4122620..4122952) Pseudomonas putida HB3267 14290125 YP_007230578.1 CDS B479_18715 NC_019905.1 4123177 4124532 R COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; Two component, sigma54 specific, Fis family transcriptional regulator complement(4123177..4124532) Pseudomonas putida HB3267 14290126 YP_007230579.1 CDS B479_18720 NC_019905.1 4124532 4125749 R COG0642 Signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase complement(4124532..4125749) Pseudomonas putida HB3267 14290127 YP_007230580.1 CDS B479_18725 NC_019905.1 4126055 4127530 R COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; sigma-54 dependent transcription regulator complement(4126055..4127530) Pseudomonas putida HB3267 14290128 YP_007230581.1 CDS B479_18730 NC_019905.1 4127697 4127993 R hypothetical protein complement(4127697..4127993) Pseudomonas putida HB3267 14290129 YP_007230582.1 CDS fliS NC_019905.1 4128008 4128403 R COG1516 Flagellin-specific chaperone FliS; flagellar protein FliS complement(4128008..4128403) Pseudomonas putida HB3267 14290130 YP_007230583.1 CDS B479_18740 NC_019905.1 4128538 4129956 R COG1345 Flagellar capping protein; flagellar hook-associated 2 domain-containing protein complement(4128538..4129956) Pseudomonas putida HB3267 14290131 YP_007230584.1 CDS B479_18745 NC_019905.1 4130035 4130394 R COG1334 Uncharacterized flagellar protein FlaG; flagellin FlaG complement(4130035..4130394) Pseudomonas putida HB3267 14290132 YP_007230585.1 CDS B479_18750 NC_019905.1 4130464 4131312 R COG1344 Flagellin and related hook-associated proteins; flagellin complement(4130464..4131312) Pseudomonas putida HB3267 14290133 YP_007230586.1 CDS B479_18755 NC_019905.1 4131568 4132503 R COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-ACP synthase complement(4131568..4132503) Pseudomonas putida HB3267 14290134 YP_007230587.1 CDS B479_18760 NC_019905.1 4132753 4136295 R COG0463 Glycosyltransferases involved in cell wall biogenesis; glycosyltransferase complement(4132753..4136295) Pseudomonas putida HB3267 14290135 YP_007230588.1 CDS B479_18765 NC_019905.1 4136339 4137493 R COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; TDP-4-oxo-6-deoxy-D-glucose transaminase complement(4136339..4137493) Pseudomonas putida HB3267 14290136 YP_007230589.1 CDS B479_18770 NC_019905.1 4137516 4138895 R COG0665 Glycine/D-amino acid oxidases (deaminating); FAD dependent oxidoreductase complement(4137516..4138895) Pseudomonas putida HB3267 14290137 YP_007230590.1 CDS B479_18775 NC_019905.1 4138907 4139674 R hypothetical protein complement(4138907..4139674) Pseudomonas putida HB3267 14290138 YP_007230591.1 CDS B479_18780 NC_019905.1 4139711 4140346 R COG0500 SAM-dependent methyltransferases; hypothetical protein complement(4139711..4140346) Pseudomonas putida HB3267 14290139 YP_007230592.1 CDS B479_18785 NC_019905.1 4140343 4141041 R WbqC-like family protein complement(4140343..4141041) Pseudomonas putida HB3267 14290140 YP_007230593.1 CDS B479_18790 NC_019905.1 4141151 4143811 R COG0463 Glycosyltransferases involved in cell wall biogenesis; glycosyltransferase complement(4141151..4143811) Pseudomonas putida HB3267 14290141 YP_007230594.1 CDS B479_18795 NC_019905.1 4143950 4147525 R COG0463 Glycosyltransferases involved in cell wall biogenesis; glycosyltransferase complement(4143950..4147525) Pseudomonas putida HB3267 14290142 YP_007230595.1 CDS flgL NC_019905.1 4147602 4149185 R COG1344 Flagellin and related hook-associated proteins; flagellar hook-associated protein FlgL complement(4147602..4149185) Pseudomonas putida HB3267 14290143 YP_007230596.1 CDS flgK NC_019905.1 4149199 4151232 R COG1256 Flagellar hook-associated protein; flagellar hook-associated protein FlgK complement(4149199..4151232) Pseudomonas putida HB3267 14290144 YP_007230597.1 CDS flgJ NC_019905.1 4151245 4152399 R COG3951 Rod binding protein; flagellar rod assembly protein/muramidase FlgJ complement(4151245..4152399) Pseudomonas putida HB3267 14290145 YP_007230598.1 CDS flgI NC_019905.1 4152411 4153520 R COG1706 Flagellar basal-body P-ring protein; flagellar basal body P-ring protein complement(4152411..4153520) Pseudomonas putida HB3267 14290146 YP_007230599.1 CDS flgH NC_019905.1 4153533 4154228 R COG2063 Flagellar basal body L-ring protein; flagellar basal body L-ring protein complement(4153533..4154228) Pseudomonas putida HB3267 14290147 YP_007230600.1 CDS flgG NC_019905.1 4154279 4155064 R COG4786 Flagellar basal body rod protein; flagellar basal body rod protein FlgG complement(4154279..4155064) Pseudomonas putida HB3267 14290148 YP_007230601.1 CDS flgF NC_019905.1 4155112 4155852 R COG4787 Flagellar basal body rod protein; flagellar basal body rod protein FlgF complement(4155112..4155852) Pseudomonas putida HB3267 14290149 YP_007230602.1 CDS B479_18835 NC_019905.1 4156126 4156311 R hypothetical protein complement(4156126..4156311) Pseudomonas putida HB3267 14290150 YP_007230603.1 CDS flgE NC_019905.1 4156384 4157739 R COG1749 Flagellar hook protein FlgE; flagellar hook protein FlgE complement(4156384..4157739) Pseudomonas putida HB3267 14290151 YP_007230604.1 CDS flgD NC_019905.1 4157771 4158475 R COG1843 Flagellar hook capping protein; flagellar basal body rod modification protein complement(4157771..4158475) Pseudomonas putida HB3267 14290152 YP_007230605.1 CDS flgC NC_019905.1 4158491 4158934 R COG1558 Flagellar basal body rod protein; flagellar basal body rod protein FlgC complement(4158491..4158934) Pseudomonas putida HB3267 14290153 YP_007230606.1 CDS flgB NC_019905.1 4158937 4159347 R COG1815 Flagellar basal body protein; flagellar basal body rod protein FlgB complement(4158937..4159347) Pseudomonas putida HB3267 14290154 YP_007230607.1 CDS B479_18860 NC_019905.1 4159602 4160429 R COG1352 Methylase of chemotaxis methyl-accepting proteins; protein-glutamate O-methyltransferase complement(4159602..4160429) Pseudomonas putida HB3267 14290155 YP_007230608.1 CDS B479_18865 NC_019905.1 4160481 4161410 R COG0835 Chemotaxis signal transduction protein; chemotaxis protein CheV complement(4160481..4161410) Pseudomonas putida HB3267 14290156 YP_007230609.1 CDS flgA NC_019905.1 4161488 4162240 D COG1261 Flagellar basal body P-ring biosynthesis protein; flagellar basal body P-ring biosynthesis protein FlgA 4161488..4162240 Pseudomonas putida HB3267 14290157 YP_007230610.1 CDS B479_18875 NC_019905.1 4162405 4162719 D COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor); anti-sigma-28 factor FlgM 4162405..4162719 Pseudomonas putida HB3267 14290158 YP_007230611.1 CDS B479_18880 NC_019905.1 4162769 4163236 D COG3418 Flagellar biosynthesis/type III secretory pathway chaperone; FlgN family protein 4162769..4163236 Pseudomonas putida HB3267 14290159 YP_007230612.1 CDS B479_18885 NC_019905.1 4163316 4164059 D COG5581 Predicted glycosyltransferase; type IV pilus assembly PilZ 4163316..4164059 Pseudomonas putida HB3267 14290160 YP_007230613.1 CDS B479_18890 NC_019905.1 4164179 4164757 D hypothetical protein 4164179..4164757 Pseudomonas putida HB3267 14290161 YP_007230614.1 CDS B479_18895 NC_019905.1 4164814 4166154 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(4164814..4166154) Pseudomonas putida HB3267 14290162 YP_007230615.1 CDS B479_18900 NC_019905.1 4166486 4166989 D hypothetical protein 4166486..4166989 Pseudomonas putida HB3267 14290163 YP_007230616.1 CDS B479_18905 NC_019905.1 4167014 4167499 R COG1522 Transcriptional regulators; AsnC family transcriptional regulator complement(4167014..4167499) Pseudomonas putida HB3267 14290164 YP_007230617.1 CDS B479_18910 NC_019905.1 4167698 4168930 D COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit; 3-methyl-2-oxobutanoate dehydrogenase 4167698..4168930 Pseudomonas putida HB3267 14290165 YP_007230618.1 CDS B479_18915 NC_019905.1 4168932 4169990 D COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit; transketolase, central region 4168932..4169990 Pseudomonas putida HB3267 14290166 YP_007230619.1 CDS B479_18920 NC_019905.1 4169991 4171277 D COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; branched-chain alpha-keto acid dehydrogenase subunit E2 4169991..4171277 Pseudomonas putida HB3267 14290167 YP_007230620.1 CDS B479_18925 NC_019905.1 4171280 4172695 D COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; dihydrolipoamide dehydrogenase 4171280..4172695 Pseudomonas putida HB3267 14290168 YP_007230621.1 CDS B479_18930 NC_019905.1 4172584 4173582 R COG2202 FOG: PAS/PAC domain; PAS/PAC sensor-containing diguanylate cyclase complement(4172584..4173582) Pseudomonas putida HB3267 14290169 YP_007230622.1 CDS B479_18935 NC_019905.1 4173676 4174554 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(4173676..4174554) Pseudomonas putida HB3267 14290170 YP_007230623.1 CDS B479_18940 NC_019905.1 4174676 4175410 D COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); AzlC family protein 4174676..4175410 Pseudomonas putida HB3267 14290171 YP_007230624.1 CDS B479_18945 NC_019905.1 4175407 4175733 D COG4392 Predicted membrane protein; branched-chain amino acid transport 4175407..4175733 Pseudomonas putida HB3267 14290172 YP_007230625.1 CDS B479_18950 NC_019905.1 4175996 4176466 R COG3709 Uncharacterized component of phosphonate metabolism; phosphonate metabolism protein/1,5-bisphosphokinase PhnN complement(4175996..4176466) Pseudomonas putida HB3267 14291756 YP_007230626.1 CDS B479_18955 NC_019905.1 4176935 4177261 D Arc domain-containing protein 4176935..4177261 Pseudomonas putida HB3267 14290174 YP_007230627.1 CDS B479_18960 NC_019905.1 4177343 4178785 R COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); magnesium transporter complement(4177343..4178785) Pseudomonas putida HB3267 14290175 YP_007230628.1 CDS B479_18965 NC_019905.1 4179960 4180148 R COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); carbon storage regulator complement(4179960..4180148) Pseudomonas putida HB3267 14291760 YP_007230629.1 CDS B479_18970 NC_019905.1 4180315 4181550 R COG0527 Aspartokinases; aspartate kinase complement(4180315..4181550) Pseudomonas putida HB3267 14290177 YP_007230630.1 CDS alaS NC_019905.1 4181635 4184259 R COG0013 Alanyl-tRNA synthetase; alanyl-tRNA ligase complement(4181635..4184259) Pseudomonas putida HB3267 14290178 YP_007230631.1 CDS B479_18980 NC_019905.1 4184525 4185805 D putative hemolysin-like protein 4184525..4185805 Pseudomonas putida HB3267 14290179 YP_007230632.1 CDS B479_18985 NC_019905.1 4185827 4186834 R COG2988 Succinylglutamate desuccinylase; succinylglutamate desuccinylase complement(4185827..4186834) Pseudomonas putida HB3267 14290180 YP_007230633.1 CDS B479_18990 NC_019905.1 4186845 4187135 R hypothetical protein complement(4186845..4187135) Pseudomonas putida HB3267 14290181 YP_007230634.1 CDS B479_18995 NC_019905.1 4187150 4188499 R COG3724 Succinylarginine dihydrolase; succinylarginine dihydrolase complement(4187150..4188499) Pseudomonas putida HB3267 14290182 YP_007230635.1 CDS astD NC_019905.1 4188523 4189986 R COG1012 NAD-dependent aldehyde dehydrogenases; succinylglutamic semialdehyde dehydrogenase complement(4188523..4189986) Pseudomonas putida HB3267 14290183 YP_007230636.1 CDS B479_19005 NC_019905.1 4189987 4191015 R COG3138 Arginine/ornithine N-succinyltransferase beta subunit; arginine N-succinyltransferase complement(4189987..4191015) Pseudomonas putida HB3267 14290184 YP_007230637.1 CDS B479_19010 NC_019905.1 4191094 4192113 R COG3138 Arginine/ornithine N-succinyltransferase beta subunit; arginine/ornithine succinyltransferase complement(4191094..4192113) Pseudomonas putida HB3267 14290185 YP_007230638.1 CDS argD NC_019905.1 4192261 4193481 R COG4992 Ornithine/acetylornithine aminotransferase; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein complement(4192261..4193481) Pseudomonas putida HB3267 14290186 YP_007230639.1 CDS B479_19020 NC_019905.1 4193829 4194809 R COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; AraC family transcriptional regulator complement(4193829..4194809) Pseudomonas putida HB3267 14290187 YP_007230640.1 CDS B479_19025 NC_019905.1 4194908 4195672 R COG4598 ABC-type histidine transport system, ATPase component; arginine/ornithine transport ATP-binding protein complement(4194908..4195672) Pseudomonas putida HB3267 14290188 YP_007230641.1 CDS B479_19030 NC_019905.1 4195695 4196393 R COG4160 ABC-type arginine/histidine transport system, permease component; polar amino acid ABC transporter inner membrane subunit complement(4195695..4196393) Pseudomonas putida HB3267 14290189 YP_007230642.1 CDS B479_19035 NC_019905.1 4196390 4197079 R COG4215 ABC-type arginine transport system, permease component; polar amino acid ABC transporter inner membrane subunit complement(4196390..4197079) Pseudomonas putida HB3267 14290190 YP_007230643.1 CDS B479_19040 NC_019905.1 4197168 4197953 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; cationic amino acid ABC transporter periplasmic binding protein complement(4197168..4197953) Pseudomonas putida HB3267 14290191 YP_007230644.1 CDS B479_19045 NC_019905.1 4198480 4200441 R COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; acetyl-CoA synthetase complement(4198480..4200441) Pseudomonas putida HB3267 14290192 YP_007230645.1 CDS B479_19050 NC_019905.1 4200840 4201094 D hypothetical protein 4200840..4201094 Pseudomonas putida HB3267 14290193 YP_007230646.1 CDS B479_19055 NC_019905.1 4201247 4202806 R COG3283 Transcriptional regulator of aromatic amino acids metabolism; PhhR complement(4201247..4202806) Pseudomonas putida HB3267 14290194 YP_007230647.1 CDS phhA NC_019905.1 4203063 4203851 D COG3186 Phenylalanine-4-hydroxylase; phenylalanine 4-monooxygenase 4203063..4203851 Pseudomonas putida HB3267 14290195 YP_007230648.1 CDS phhB NC_019905.1 4203891 4204247 D COG2154 Pterin-4a-carbinolamine dehydratase; pterin-4-alpha-carbinolamine dehydratase 4203891..4204247 Pseudomonas putida HB3267 14290196 YP_007230649.1 CDS B479_19070 NC_019905.1 4204438 4204566 D hypothetical protein 4204438..4204566 Pseudomonas putida HB3267 14290197 YP_007230650.1 CDS B479_19075 NC_019905.1 4204658 4205854 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 4204658..4205854 Pseudomonas putida HB3267 14290198 YP_007230651.1 CDS B479_19080 NC_019905.1 4205993 4209013 R COG0277 FAD/FMN-containing dehydrogenases; FAD linked oxidase domain-containing protein complement(4205993..4209013) Pseudomonas putida HB3267 14290199 YP_007230652.1 CDS B479_19085 NC_019905.1 4209166 4210050 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 4209166..4210050 Pseudomonas putida HB3267 14290200 YP_007230653.1 CDS B479_19090 NC_019905.1 4210227 4211630 R COG1113 Gamma-aminobutyrate permease and related permeases; amino acid ABC transporter permease complement(4210227..4211630) Pseudomonas putida HB3267 14290201 YP_007230654.1 CDS B479_19095 NC_019905.1 4212389 4213456 R COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; RNA-binding S4 domain-containing protein complement(4212389..4213456) Pseudomonas putida HB3267 14290202 YP_007230655.1 CDS B479_19100 NC_019905.1 4213669 4214439 R COG1386 Predicted transcriptional regulator containing the HTH domain; segregation and condensation protein B complement(4213669..4214439) Pseudomonas putida HB3267 14290203 YP_007230656.1 CDS B479_19105 NC_019905.1 4214426 4215280 R COG1354 Uncharacterized conserved protein; chromosome segregation and condensation protein ScpA complement(4214426..4215280) Pseudomonas putida HB3267 14290204 YP_007230657.1 CDS B479_19110 NC_019905.1 4215277 4215906 R COG0009 Putative translation factor (SUA5); Sua5/YciO/YrdC/YwlC family protein complement(4215277..4215906) Pseudomonas putida HB3267 14290205 YP_007230658.1 CDS B479_19115 NC_019905.1 4215920 4216780 R COG0613 Predicted metal-dependent phosphoesterases (PHP family); phosphotransferase domain-containing protein complement(4215920..4216780) Pseudomonas putida HB3267 14290206 YP_007230659.1 CDS B479_19120 NC_019905.1 4216848 4217441 D COG2917 Intracellular septation protein A; intracellular septation protein A 4216848..4217441 Pseudomonas putida HB3267 14290207 YP_007230660.1 CDS B479_19125 NC_019905.1 4217443 4217742 D COG2350 Uncharacterized protein conserved in bacteria; hypothetical protein 4217443..4217742 Pseudomonas putida HB3267 14290208 YP_007230661.1 CDS B479_19130 NC_019905.1 4217947 4218624 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component transcriptional regulator 4217947..4218624 Pseudomonas putida HB3267 14290209 YP_007230662.1 CDS B479_19135 NC_019905.1 4218726 4219142 D COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein; hypothetical protein 4218726..4219142 Pseudomonas putida HB3267 14290210 YP_007230663.1 CDS B479_19140 NC_019905.1 4219203 4220543 D COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 4219203..4220543 Pseudomonas putida HB3267 14290211 YP_007230664.1 CDS B479_19145 NC_019905.1 4220692 4221249 R COG0778 Nitroreductase; nitroreductase complement(4220692..4221249) Pseudomonas putida HB3267 14290212 YP_007230665.1 CDS B479_19150 NC_019905.1 4221352 4222806 D COG0168 Trk-type K+ transport systems, membrane components; TrkH family potassium uptake protein 4221352..4222806 Pseudomonas putida HB3267 14290213 YP_007230666.1 CDS B479_19155 NC_019905.1 4222763 4223824 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(4222763..4223824) Pseudomonas putida HB3267 14290214 YP_007230667.1 CDS B479_19160 NC_019905.1 4223978 4224289 D COG4323 Predicted membrane protein; hypothetical protein 4223978..4224289 Pseudomonas putida HB3267 14290215 YP_007230668.1 CDS B479_19165 NC_019905.1 4224331 4225143 R COG2908 Uncharacterized protein conserved in bacteria; metallophosphoesterase complement(4224331..4225143) Pseudomonas putida HB3267 14290216 YP_007230669.1 CDS B479_19170 NC_019905.1 4225275 4226048 D COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator 4225275..4226048 Pseudomonas putida HB3267 14290217 YP_007230670.1 CDS B479_19175 NC_019905.1 4226223 4227113 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein 4226223..4227113 Pseudomonas putida HB3267 14290218 YP_007230671.1 CDS B479_19180 NC_019905.1 4227115 4227396 R COG3526 Uncharacterized protein conserved in bacteria; putative selenoprotein complement(4227115..4227396) Pseudomonas putida HB3267 14290219 YP_007230672.1 CDS B479_19185 NC_019905.1 4227464 4229650 D COG1752 Predicted esterase of the alpha-beta hydrolase superfamily; patatin 4227464..4229650 Pseudomonas putida HB3267 14290220 YP_007230673.1 CDS B479_19190 NC_019905.1 4229780 4230217 R COG1846 Transcriptional regulators; MarR family transcriptional regulator complement(4229780..4230217) Pseudomonas putida HB3267 14290221 YP_007230674.1 CDS B479_19195 NC_019905.1 4230368 4232515 R COG0514 Superfamily II DNA helicase; ATP-dependent DNA helicase RecQ complement(4230368..4232515) Pseudomonas putida HB3267 14290222 YP_007230675.1 CDS B479_19200 NC_019905.1 4232762 4233349 D COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA; YecA family protein 4232762..4233349 Pseudomonas putida HB3267 14290223 YP_007230676.1 CDS B479_19205 NC_019905.1 4233357 4233722 D COG2832 Uncharacterized protein conserved in bacteria; hypothetical protein 4233357..4233722 Pseudomonas putida HB3267 14290224 YP_007230677.1 CDS B479_19210 NC_019905.1 4234034 4235392 D COG1538 Outer membrane protein; TolC family type I secretion outer membrane protein 4234034..4235392 Pseudomonas putida HB3267 14290225 YP_007230678.1 CDS B479_19215 NC_019905.1 4235521 4236120 R COG3148 Uncharacterized conserved protein; DTW domain-containing protein complement(4235521..4236120) Pseudomonas putida HB3267 14290226 YP_007230679.1 CDS B479_19220 NC_019905.1 4236285 4237850 R COG2202 FOG: PAS/PAC domain; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor complement(4236285..4237850) Pseudomonas putida HB3267 14290227 YP_007230680.1 CDS B479_19225 NC_019905.1 4237990 4238883 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(4237990..4238883) Pseudomonas putida HB3267 14290228 YP_007230681.1 CDS B479_19230 NC_019905.1 4239109 4240059 D COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; agmatinase 4239109..4240059 Pseudomonas putida HB3267 14290229 YP_007230682.1 CDS B479_19235 NC_019905.1 4240193 4241572 D COG0591 Na+/proline symporter; Na+/solute symporter 4240193..4241572 Pseudomonas putida HB3267 14290230 YP_007230683.1 CDS B479_19240 NC_019905.1 4242015 4242908 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(4242015..4242908) Pseudomonas putida HB3267 14290231 YP_007230684.1 CDS B479_19245 NC_019905.1 4243015 4244187 D COG0477 Permeases of the major facilitator superfamily; hypothetical protein 4243015..4244187 Pseudomonas putida HB3267 14290232 YP_007230685.1 CDS B479_19250 NC_019905.1 4244315 4245241 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein complement(4244315..4245241) Pseudomonas putida HB3267 14290233 YP_007230686.1 CDS B479_19255 NC_019905.1 4245349 4245744 R COG1846 Transcriptional regulators; hypothetical protein complement(4245349..4245744) Pseudomonas putida HB3267 14290234 YP_007230687.1 CDS B479_19260 NC_019905.1 4245994 4246266 D hypothetical protein 4245994..4246266 Pseudomonas putida HB3267 14290235 YP_007230688.1 CDS B479_19265 NC_019905.1 4246392 4247714 R COG0513 Superfamily II DNA and RNA helicases; DEAD/DEAH box helicase complement(4246392..4247714) Pseudomonas putida HB3267 14290236 YP_007230689.1 CDS B479_19270 NC_019905.1 4247858 4249159 D COG0668 Small-conductance mechanosensitive channel; mechanosensitive ion channel protein MscS 4247858..4249159 Pseudomonas putida HB3267 14290237 YP_007230690.1 CDS B479_19275 NC_019905.1 4249304 4250614 R COG1457 Purine-cytosine permease and related proteins; cytosine/purines uracil thiamine allantoin permease complement(4249304..4250614) Pseudomonas putida HB3267 14290238 YP_007230691.1 CDS B479_19280 NC_019905.1 4250753 4251634 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; carboxylate/amino acid/amine transporter complement(4250753..4251634) Pseudomonas putida HB3267 14290239 YP_007230692.1 CDS B479_19285 NC_019905.1 4251920 4252519 R COG1182 Acyl carrier protein phosphodiesterase; NAD(P)H dehydrogenase (quinone) complement(4251920..4252519) Pseudomonas putida HB3267 14290240 YP_007230693.1 CDS B479_19290 NC_019905.1 4252630 4252944 R hypothetical protein complement(4252630..4252944) Pseudomonas putida HB3267 14290241 YP_007230694.1 CDS B479_19295 NC_019905.1 4252993 4253916 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 4252993..4253916 Pseudomonas putida HB3267 14290242 YP_007230695.1 CDS B479_19300 NC_019905.1 4253930 4254742 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold protein 4253930..4254742 Pseudomonas putida HB3267 14290243 YP_007230696.1 CDS B479_19305 NC_019905.1 4254736 4255293 D COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; PpiA 4254736..4255293 Pseudomonas putida HB3267 14290244 YP_007230697.1 CDS B479_19310 NC_019905.1 4255357 4257189 D COG1132 ABC-type multidrug transport system, ATPase and permease components; ABC transporter ATP-binding protein/permease 4255357..4257189 Pseudomonas putida HB3267 14290245 YP_007230698.1 CDS B479_19315 NC_019905.1 4257316 4258482 R COG3146 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4257316..4258482) Pseudomonas putida HB3267 14290246 YP_007230699.1 CDS B479_19320 NC_019905.1 4258706 4259950 D hypothetical protein 4258706..4259950 Pseudomonas putida HB3267 14290247 YP_007230700.1 CDS B479_19325 NC_019905.1 4260172 4261293 R COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-(acyl carrier protein) synthase III complement(4260172..4261293) Pseudomonas putida HB3267 14290248 YP_007230701.1 CDS B479_19330 NC_019905.1 4261451 4265356 R COG1643 HrpA-like helicases; ATP-dependent helicase HrpA complement(4261451..4265356) Pseudomonas putida HB3267 14290249 YP_007230702.1 CDS B479_19335 NC_019905.1 4265927 4267291 D COG0174 Glutamine synthetase; glutamine synthetase 4265927..4267291 Pseudomonas putida HB3267 14290250 YP_007230703.1 CDS B479_19340 NC_019905.1 4267315 4268622 D COG0665 Glycine/D-amino acid oxidases (deaminating); FAD dependent oxidoreductase 4267315..4268622 Pseudomonas putida HB3267 14290251 YP_007230704.1 CDS B479_19345 NC_019905.1 4268781 4270478 R COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; long-chain-fatty-acid--CoA ligase complement(4268781..4270478) Pseudomonas putida HB3267 14290252 YP_007230705.1 CDS B479_19350 NC_019905.1 4270839 4272527 R COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; long-chain-fatty-acid--CoA ligase complement(4270839..4272527) Pseudomonas putida HB3267 14290253 YP_007230706.1 CDS B479_19355 NC_019905.1 4272747 4273691 D COG2267 Lysophospholipase; alpha/beta hydrolase fold protein 4272747..4273691 Pseudomonas putida HB3267 14290254 YP_007230707.1 CDS B479_19360 NC_019905.1 4273726 4274196 D COG2030 Acyl dehydratase; dehydratase 4273726..4274196 Pseudomonas putida HB3267 14290255 YP_007230708.1 CDS B479_19365 NC_019905.1 4274323 4275561 R COG4941 Predicted RNA polymerase sigma factor containing a TPR repeat domain; RNA polymerase ECF-subfamily sigma factor complement(4274323..4275561) Pseudomonas putida HB3267 14290256 YP_007230709.1 CDS B479_19370 NC_019905.1 4275561 4276046 R COG3832 Uncharacterized conserved protein; activator of Hsp90 ATPase 1 family protein complement(4275561..4276046) Pseudomonas putida HB3267 14290257 YP_007230710.1 CDS B479_19375 NC_019905.1 4276068 4276412 R COG3795 Uncharacterized protein conserved in bacteria; DGPFAETKE family protein complement(4276068..4276412) Pseudomonas putida HB3267 14290258 YP_007230711.1 CDS B479_19380 NC_019905.1 4276457 4276882 R COG4319 Ketosteroid isomerase homolog; hypothetical protein complement(4276457..4276882) Pseudomonas putida HB3267 14290259 YP_007230712.1 CDS B479_19385 NC_019905.1 4277041 4277373 R COG4226 Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters; HicB family protein complement(4277041..4277373) Pseudomonas putida HB3267 14290260 YP_007230713.1 CDS B479_19390 NC_019905.1 4277370 4277624 R COG0583 Transcriptional regulator; hypothetical protein complement(4277370..4277624) Pseudomonas putida HB3267 14290261 YP_007230714.1 CDS B479_19395 NC_019905.1 4277765 4278022 R hypothetical protein complement(4277765..4278022) Pseudomonas putida HB3267 14290262 YP_007230715.1 CDS B479_19400 NC_019905.1 4278377 4278745 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; acetyltransferase 4278377..4278745 Pseudomonas putida HB3267 14290263 YP_007230716.1 CDS B479_19405 NC_019905.1 4278700 4279236 R COG0242 N-formylmethionyl-tRNA deformylase; peptide deformylase complement(4278700..4279236) Pseudomonas putida HB3267 14290264 YP_007230717.1 CDS B479_19410 NC_019905.1 4279233 4280192 R COG1295 Predicted membrane protein; ribonuclease BN complement(4279233..4280192) Pseudomonas putida HB3267 14290265 YP_007230718.1 CDS B479_19415 NC_019905.1 4280414 4280593 R COG3237 Uncharacterized protein conserved in bacteria; CsbD family protein complement(4280414..4280593) Pseudomonas putida HB3267 14290266 YP_007230719.1 CDS B479_19420 NC_019905.1 4280780 4281160 D hypothetical protein 4280780..4281160 Pseudomonas putida HB3267 14290267 YP_007230720.1 CDS B479_19425 NC_019905.1 4281161 4281997 R COG2996 Uncharacterized protein conserved in bacteria; RNA-binding S1 domain-containing protein complement(4281161..4281997) Pseudomonas putida HB3267 14290268 YP_007230721.1 CDS B479_19430 NC_019905.1 4282129 4282989 D lipoprotein 4282129..4282989 Pseudomonas putida HB3267 14290269 YP_007230722.1 CDS aceK NC_019905.1 4283037 4284752 R COG4579 Isocitrate dehydrogenase kinase/phosphatase; bifunctional isocitrate dehydrogenase kinase/phosphatase protein complement(4283037..4284752) Pseudomonas putida HB3267 14290270 YP_007230723.1 CDS B479_19440 NC_019905.1 4285001 4285876 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein 4285001..4285876 Pseudomonas putida HB3267 14290271 YP_007230724.1 CDS B479_19445 NC_019905.1 4285890 4286348 D hypothetical protein 4285890..4286348 Pseudomonas putida HB3267 14290272 YP_007230725.1 CDS B479_19450 NC_019905.1 4286352 4287233 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein complement(4286352..4287233) Pseudomonas putida HB3267 14290273 YP_007230726.1 CDS B479_19455 NC_019905.1 4287903 4288763 D COG1262 Uncharacterized conserved protein; hypothetical protein 4287903..4288763 Pseudomonas putida HB3267 14290274 YP_007230727.1 CDS B479_19460 NC_019905.1 4288890 4291352 D COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent siderophore receptor 4288890..4291352 Pseudomonas putida HB3267 14290275 YP_007230728.1 CDS B479_19465 NC_019905.1 4291510 4300113 R COG1020 Non-ribosomal peptide synthetase modules and related proteins; amino acid adenylation domain-containing protein complement(4291510..4300113) Pseudomonas putida HB3267 14290276 YP_007230729.1 CDS B479_19470 NC_019905.1 4300136 4306699 R COG1020 Non-ribosomal peptide synthetase modules and related proteins; pyoverdine synthetase D complement(4300136..4306699) Pseudomonas putida HB3267 14290277 YP_007230730.1 CDS B479_19475 NC_019905.1 4306712 4310056 R COG1020 Non-ribosomal peptide synthetase modules and related proteins; amino acid adenylation domain-containing protein complement(4306712..4310056) Pseudomonas putida HB3267 14290278 YP_007230731.1 CDS B479_19480 NC_019905.1 4310058 4317881 R COG1020 Non-ribosomal peptide synthetase modules and related proteins; amino acid adenylation domain-containing protein complement(4310058..4317881) Pseudomonas putida HB3267 14290279 YP_007230732.1 CDS B479_19485 NC_019905.1 4317883 4324347 R COG1020 Non-ribosomal peptide synthetase modules and related proteins; amino acid adenylation domain-containing protein complement(4317883..4324347) Pseudomonas putida HB3267 14290280 YP_007230733.1 CDS B479_19490 NC_019905.1 4325056 4326075 D hypothetical protein 4325056..4326075 Pseudomonas putida HB3267 14290281 YP_007230734.1 CDS B479_19495 NC_019905.1 4326698 4327066 D hypothetical protein 4326698..4327066 Pseudomonas putida HB3267 14290282 YP_007230735.1 CDS B479_19500 NC_019905.1 4327245 4327505 R hypothetical protein complement(4327245..4327505) Pseudomonas putida HB3267 14290283 YP_007230736.1 CDS B479_19505 NC_019905.1 4328150 4329133 R putative pyoverdine biosynthesis regulatory protein complement(4328150..4329133) Pseudomonas putida HB3267 14290284 YP_007230737.1 CDS B479_19510 NC_019905.1 4329315 4329764 D COG3241 Azurin; azurin 4329315..4329764 Pseudomonas putida HB3267 14290285 YP_007230738.1 CDS B479_19515 NC_019905.1 4329798 4331450 D COG4615 ABC-type siderophore export system, fused ATPase and permease components; cyclic peptide transporter 4329798..4331450 Pseudomonas putida HB3267 14290286 YP_007230739.1 CDS B479_19520 NC_019905.1 4331605 4332762 D COG1672 Predicted ATPase (AAA+ superfamily); hypothetical protein 4331605..4332762 Pseudomonas putida HB3267 14290287 YP_007230740.1 CDS B479_19525 NC_019905.1 4332899 4333834 R COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases; aspartyl/asparaginyl beta-hydroxylase complement(4332899..4333834) Pseudomonas putida HB3267 14290288 YP_007230741.1 CDS B479_19530 NC_019905.1 4334008 4334982 R COG0031 Cysteine synthase; cysteine synthase A complement(4334008..4334982) Pseudomonas putida HB3267 14290289 YP_007230742.1 CDS B479_19535 NC_019905.1 4335117 4336190 D hypothetical protein 4335117..4336190 Pseudomonas putida HB3267 14290290 YP_007230743.1 CDS B479_19540 NC_019905.1 4336419 4337264 D COG0714 MoxR-like ATPases; AAA ATPase 4336419..4337264 Pseudomonas putida HB3267 14290291 YP_007230744.1 CDS B479_19545 NC_019905.1 4337278 4338456 D COG3825 Uncharacterized protein conserved in bacteria; VWA containing CoxE family protein 4337278..4338456 Pseudomonas putida HB3267 14290292 YP_007230745.1 CDS B479_19550 NC_019905.1 4338571 4339488 R COG1984 Allophanate hydrolase subunit 2; urea amidolyase subunit complement(4338571..4339488) Pseudomonas putida HB3267 14290293 YP_007230746.1 CDS B479_19555 NC_019905.1 4339485 4340171 R COG2049 Allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 complement(4339485..4340171) Pseudomonas putida HB3267 14290294 YP_007230747.1 CDS B479_19560 NC_019905.1 4340168 4340947 R COG1540 Uncharacterized proteins, homologs of lactam utilization protein B; LamB/YcsF family protein complement(4340168..4340947) Pseudomonas putida HB3267 14290295 YP_007230748.1 CDS B479_19565 NC_019905.1 4340957 4342243 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(4340957..4342243) Pseudomonas putida HB3267 14290296 YP_007230749.1 CDS B479_19570 NC_019905.1 4342372 4343283 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 4342372..4343283 Pseudomonas putida HB3267 14290297 YP_007230750.1 CDS B479_19575 NC_019905.1 4343418 4343939 R hypothetical protein complement(4343418..4343939) Pseudomonas putida HB3267 14290298 YP_007230751.1 CDS B479_19580 NC_019905.1 4343949 4344722 R COG0121 Predicted glutamine amidotransferase; glutamine amidotransferase complement(4343949..4344722) Pseudomonas putida HB3267 14290299 YP_007230752.1 CDS B479_19585 NC_019905.1 4344737 4345243 R hypothetical protein complement(4344737..4345243) Pseudomonas putida HB3267 14290300 YP_007230753.1 CDS B479_19590 NC_019905.1 4345381 4347423 D COG1770 Protease II; oligopeptidase B 4345381..4347423 Pseudomonas putida HB3267 14290301 YP_007230754.1 CDS B479_19595 NC_019905.1 4347536 4347814 R hypothetical protein complement(4347536..4347814) Pseudomonas putida HB3267 14290302 YP_007230755.1 CDS B479_19600 NC_019905.1 4347946 4348317 D COG1403 Restriction endonuclease; hypothetical protein 4347946..4348317 Pseudomonas putida HB3267 14290303 YP_007230756.1 CDS B479_19605 NC_019905.1 4348391 4348861 D COG0219 Predicted rRNA methylase (SpoU class); tRNA/rRNA methyltransferase 4348391..4348861 Pseudomonas putida HB3267 14290304 YP_007230757.1 CDS B479_19610 NC_019905.1 4348924 4349265 D hypothetical protein 4348924..4349265 Pseudomonas putida HB3267 14290305 YP_007230758.1 CDS B479_19615 NC_019905.1 4349425 4350633 R hypothetical protein complement(4349425..4350633) Pseudomonas putida HB3267 14290306 YP_007230759.1 CDS B479_19620 NC_019905.1 4350675 4351124 R COG2983 Uncharacterized conserved protein; hypothetical protein complement(4350675..4351124) Pseudomonas putida HB3267 14290307 YP_007230760.1 CDS B479_19625 NC_019905.1 4351269 4351862 D COG0778 Nitroreductase; nitroreductase 4351269..4351862 Pseudomonas putida HB3267 14290308 YP_007230761.1 CDS B479_19630 NC_019905.1 4351979 4352911 R COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(4351979..4352911) Pseudomonas putida HB3267 14290309 YP_007230762.1 CDS B479_19635 NC_019905.1 4352914 4353207 R COG3100 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4352914..4353207) Pseudomonas putida HB3267 14290310 YP_007230763.1 CDS B479_19640 NC_019905.1 4353204 4354337 R COG0349 Ribonuclease D; ribonuclease D complement(4353204..4354337) Pseudomonas putida HB3267 14290311 YP_007230764.1 CDS B479_19645 NC_019905.1 4354560 4356197 R COG2194 Predicted membrane-associated, metal-dependent hydrolase; sulfatase complement(4354560..4356197) Pseudomonas putida HB3267 14290312 YP_007230765.1 CDS B479_19650 NC_019905.1 4356363 4356728 R COG3232 5-carboxymethyl-2-hydroxymuconate isomerase; 5-carboxymethyl-2-hydroxymuconate isomerase complement(4356363..4356728) Pseudomonas putida HB3267 14290313 YP_007230766.1 CDS B479_19655 NC_019905.1 4356846 4357085 D hypothetical protein 4356846..4357085 Pseudomonas putida HB3267 14290314 YP_007230767.1 CDS B479_19660 NC_019905.1 4357232 4358416 R COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; cystathionine gamma-lyase complement(4357232..4358416) Pseudomonas putida HB3267 14290315 YP_007230768.1 CDS B479_19665 NC_019905.1 4358509 4358970 D COG1522 Transcriptional regulators; AsnC family transcriptional regulator 4358509..4358970 Pseudomonas putida HB3267 14290316 YP_007230769.1 CDS B479_19670 NC_019905.1 4359098 4361428 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; molybdopterin oxidoreductase subunit alpha complement(4359098..4361428) Pseudomonas putida HB3267 14290317 YP_007230770.1 CDS moaA NC_019905.1 4361751 4362755 D COG2896 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein A 4361751..4362755 Pseudomonas putida HB3267 14290318 YP_007230771.1 CDS B479_19680 NC_019905.1 4362776 4363675 D COG3781 Predicted membrane protein; hypothetical protein 4362776..4363675 Pseudomonas putida HB3267 14290319 YP_007230772.1 CDS B479_19685 NC_019905.1 4363806 4364345 R COG0521 Molybdopterin biosynthesis enzymes; molybdenum cofactor biosynthesis protein B complement(4363806..4364345) Pseudomonas putida HB3267 14290320 YP_007230773.1 CDS B479_19690 NC_019905.1 4364486 4365373 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 4364486..4365373 Pseudomonas putida HB3267 14290321 YP_007230774.1 CDS B479_19695 NC_019905.1 4365361 4366143 R COG2202 FOG: PAS/PAC domain; AraC family transcriptional regulator complement(4365361..4366143) Pseudomonas putida HB3267 14290322 YP_007230775.1 CDS B479_19700 NC_019905.1 4366524 4368140 D COG0531 Amino acid transporters; amino acid permease-associated protein 4366524..4368140 Pseudomonas putida HB3267 14290323 YP_007230776.1 CDS B479_19705 NC_019905.1 4368289 4369215 D COG3938 Proline racemase; proline racemase 4368289..4369215 Pseudomonas putida HB3267 14290324 YP_007230777.1 CDS B479_19710 NC_019905.1 4369261 4370208 D COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthetase 4369261..4370208 Pseudomonas putida HB3267 14290325 YP_007230778.1 CDS B479_19715 NC_019905.1 4370365 4371942 D COG1012 NAD-dependent aldehyde dehydrogenases; ketoglutarate semialdehyde dehydrogenase 4370365..4371942 Pseudomonas putida HB3267 14290326 YP_007230779.1 CDS B479_19720 NC_019905.1 4371945 4373192 D COG0665 Glycine/D-amino acid oxidases (deaminating); FAD dependent oxidoreductase 4371945..4373192 Pseudomonas putida HB3267 14290327 YP_007230780.1 CDS B479_19725 NC_019905.1 4373310 4374401 R COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; XenA complement(4373310..4374401) Pseudomonas putida HB3267 14290328 YP_007230781.1 CDS B479_19730 NC_019905.1 4374452 4374787 D COG0640 Predicted transcriptional regulators; ArsR family transcriptional regulator 4374452..4374787 Pseudomonas putida HB3267 14290329 YP_007230782.1 CDS B479_19735 NC_019905.1 4374907 4375524 R COG2345 Predicted transcriptional regulator; putative transcriptional regulator complement(4374907..4375524) Pseudomonas putida HB3267 14290330 YP_007230783.1 CDS B479_19740 NC_019905.1 4375524 4376168 R hypothetical protein complement(4375524..4376168) Pseudomonas putida HB3267 14290331 YP_007230784.1 CDS B479_19745 NC_019905.1 4376413 4378050 R COG0579 Predicted dehydrogenase; malate:quinone oxidoreductase complement(4376413..4378050) Pseudomonas putida HB3267 14290332 YP_007230785.1 CDS B479_19750 NC_019905.1 4378455 4379507 D COG3938 Proline racemase; putative proline racemase protein 4378455..4379507 Pseudomonas putida HB3267 14290333 YP_007230786.1 CDS B479_19755 NC_019905.1 4379660 4379851 R hypothetical protein complement(4379660..4379851) Pseudomonas putida HB3267 14290334 YP_007230787.1 CDS B479_19760 NC_019905.1 4380071 4381525 D COG0168 Trk-type K+ transport systems, membrane components; TrkH family potassium uptake protein 4380071..4381525 Pseudomonas putida HB3267 14290335 YP_007230788.1 CDS B479_19765 NC_019905.1 4381687 4383048 D COG3004 Na+/H+ antiporter; Na+/H+ antiporter NhaA 4381687..4383048 Pseudomonas putida HB3267 14290336 YP_007230789.1 CDS B479_19770 NC_019905.1 4383589 4384041 D COG1629 Outer membrane receptor proteins, mostly Fe transport; hypothetical protein 4383589..4384041 Pseudomonas putida HB3267 14290337 YP_007230790.1 CDS B479_19775 NC_019905.1 4384201 4384794 D hypothetical protein 4384201..4384794 Pseudomonas putida HB3267 14290338 YP_007230791.1 CDS B479_19780 NC_019905.1 4384851 4385297 D hypothetical protein 4384851..4385297 Pseudomonas putida HB3267 14290339 YP_007230792.1 CDS B479_19785 NC_019905.1 4385468 4385596 R hypothetical protein complement(4385468..4385596) Pseudomonas putida HB3267 14290340 YP_007230793.1 CDS B479_19790 NC_019905.1 4385611 4385799 R hypothetical protein complement(4385611..4385799) Pseudomonas putida HB3267 14290341 YP_007230794.1 CDS B479_19795 NC_019905.1 4385833 4386330 R hypothetical protein complement(4385833..4386330) Pseudomonas putida HB3267 14290342 YP_007230795.1 CDS B479_19800 NC_019905.1 4386327 4386815 R COG4678 Muramidase (phage lambda lysozyme); lysozyme complement(4386327..4386815) Pseudomonas putida HB3267 14290343 YP_007230796.1 CDS B479_19805 NC_019905.1 4386871 4387911 R hypothetical protein complement(4386871..4387911) Pseudomonas putida HB3267 14290344 YP_007230797.1 CDS B479_19810 NC_019905.1 4387908 4388372 R COG1403 Restriction endonuclease; HNH endonuclease domain-containing protein complement(4387908..4388372) Pseudomonas putida HB3267 14290345 YP_007230798.1 CDS B479_19815 NC_019905.1 4388369 4388536 R hypothetical protein complement(4388369..4388536) Pseudomonas putida HB3267 14290346 YP_007230799.1 CDS B479_19820 NC_019905.1 4388596 4389159 R hypothetical protein complement(4388596..4389159) Pseudomonas putida HB3267 14290347 YP_007230800.1 CDS B479_19825 NC_019905.1 4389156 4389470 R hypothetical protein complement(4389156..4389470) Pseudomonas putida HB3267 14290348 YP_007230801.1 CDS B479_19830 NC_019905.1 4389467 4390240 R COG3646 Uncharacterized phage-encoded protein; hypothetical protein complement(4389467..4390240) Pseudomonas putida HB3267 14290349 YP_007230802.1 CDS B479_19835 NC_019905.1 4390237 4390533 R hypothetical protein complement(4390237..4390533) Pseudomonas putida HB3267 14290350 YP_007230803.1 CDS B479_19840 NC_019905.1 4390530 4390763 R hypothetical protein complement(4390530..4390763) Pseudomonas putida HB3267 14290351 YP_007230804.1 CDS B479_19845 NC_019905.1 4390772 4391080 R hypothetical protein complement(4390772..4391080) Pseudomonas putida HB3267 14290352 YP_007230805.1 CDS B479_19850 NC_019905.1 4391077 4391355 R hypothetical protein complement(4391077..4391355) Pseudomonas putida HB3267 14290353 YP_007230806.1 CDS B479_19855 NC_019905.1 4391490 4391789 R COG4197 Uncharacterized protein conserved in bacteria, prophage-related; hypothetical protein complement(4391490..4391789) Pseudomonas putida HB3267 14290354 YP_007230807.1 CDS B479_19860 NC_019905.1 4391876 4392565 D COG2932 Predicted transcriptional regulator; XRE family transcriptional regulator 4391876..4392565 Pseudomonas putida HB3267 14290355 YP_007230808.1 CDS B479_19865 NC_019905.1 4392699 4393091 D LuxR family transcriptional regulator 4392699..4393091 Pseudomonas putida HB3267 14290356 YP_007230809.1 CDS B479_19870 NC_019905.1 4393800 4394366 D hypothetical protein 4393800..4394366 Pseudomonas putida HB3267 14290357 YP_007230810.1 CDS B479_19875 NC_019905.1 4394366 4394845 D hypothetical protein 4394366..4394845 Pseudomonas putida HB3267 14290358 YP_007230811.1 CDS B479_19880 NC_019905.1 4394931 4395326 D COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); carbon storage regulator CsrA 4394931..4395326 Pseudomonas putida HB3267 14290359 YP_007230812.1 CDS B479_19885 NC_019905.1 4395323 4395466 D hypothetical protein 4395323..4395466 Pseudomonas putida HB3267 14290360 YP_007230813.1 CDS B479_19890 NC_019905.1 4395463 4396194 D COG0088 Ribosomal protein L4; hypothetical protein 4395463..4396194 Pseudomonas putida HB3267 14290361 YP_007230814.1 CDS B479_19895 NC_019905.1 4396352 4396672 D hypothetical protein 4396352..4396672 Pseudomonas putida HB3267 14290362 YP_007230815.1 CDS B479_19900 NC_019905.1 4396669 4397445 D COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases; phosphoprotein phosphatase 4396669..4397445 Pseudomonas putida HB3267 14290363 YP_007230816.1 CDS B479_19905 NC_019905.1 4397633 4398823 D COG0582 Integrase; integrase family protein 4397633..4398823 Pseudomonas putida HB3267 14290364 YP_007230817.1 CDS B479_19910 NC_019905.1 4398974 4399162 R hypothetical protein complement(4398974..4399162) Pseudomonas putida HB3267 14290365 YP_007230818.1 CDS B479_19915 NC_019905.1 4399219 4399479 D hypothetical protein 4399219..4399479 Pseudomonas putida HB3267 14290366 YP_007230819.1 CDS B479_19920 NC_019905.1 4399454 4400275 D COG0616 Periplasmic serine proteases (ClpP class); hypothetical protein 4399454..4400275 Pseudomonas putida HB3267 14290367 YP_007230820.1 CDS B479_19925 NC_019905.1 4400298 4400639 R putative lipoprotein complement(4400298..4400639) Pseudomonas putida HB3267 14290368 YP_007230821.1 CDS B479_19930 NC_019905.1 4400636 4400998 R hypothetical protein complement(4400636..4400998) Pseudomonas putida HB3267 14290369 YP_007230822.1 CDS B479_19935 NC_019905.1 4400995 4401447 R hypothetical protein complement(4400995..4401447) Pseudomonas putida HB3267 14290370 YP_007230823.1 CDS B479_19940 NC_019905.1 4401505 4402101 R hypothetical protein complement(4401505..4402101) Pseudomonas putida HB3267 14290371 YP_007230824.1 CDS B479_19945 NC_019905.1 4402101 4402901 R hypothetical protein complement(4402101..4402901) Pseudomonas putida HB3267 14290372 YP_007230825.1 CDS B479_19950 NC_019905.1 4402914 4403969 R hypothetical protein complement(4402914..4403969) Pseudomonas putida HB3267 14290373 YP_007230826.1 CDS B479_19955 NC_019905.1 4403969 4407340 R COG4733 Phage-related protein, tail component; host specificity protein J complement(4403969..4407340) Pseudomonas putida HB3267 14290374 YP_007230827.1 CDS B479_19960 NC_019905.1 4407337 4407735 R hypothetical protein complement(4407337..4407735) Pseudomonas putida HB3267 14290375 YP_007230828.1 CDS B479_19965 NC_019905.1 4407738 4408343 R hypothetical protein complement(4407738..4408343) Pseudomonas putida HB3267 14290376 YP_007230829.1 CDS B479_19970 NC_019905.1 4408343 4408927 R hypothetical protein complement(4408343..4408927) Pseudomonas putida HB3267 14290377 YP_007230830.1 CDS B479_19975 NC_019905.1 4408973 4412158 R COG5281 Phage-related minor tail protein; tail tape measure protein complement(4408973..4412158) Pseudomonas putida HB3267 14290378 YP_007230831.1 CDS B479_19980 NC_019905.1 4413006 4413335 R hypothetical protein complement(4413006..4413335) Pseudomonas putida HB3267 14290379 YP_007230832.1 CDS B479_19985 NC_019905.1 4413376 4413876 R hypothetical protein complement(4413376..4413876) Pseudomonas putida HB3267 14290380 YP_007230833.1 CDS B479_19990 NC_019905.1 4413932 4414318 R hypothetical protein complement(4413932..4414318) Pseudomonas putida HB3267 14290381 YP_007230834.1 CDS B479_19995 NC_019905.1 4414311 4414886 R HK97 family phage protein complement(4414311..4414886) Pseudomonas putida HB3267 14290382 YP_007230835.1 CDS B479_20000 NC_019905.1 4414890 4415060 R hypothetical protein complement(4414890..4415060) Pseudomonas putida HB3267 14290383 YP_007230836.1 CDS B479_20005 NC_019905.1 4415069 4415395 R COG5614 Bacteriophage head-tail adaptor; phage head-tail adaptor complement(4415069..4415395) Pseudomonas putida HB3267 14290384 YP_007230837.1 CDS B479_20010 NC_019905.1 4415395 4415694 R phage protein complement(4415395..4415694) Pseudomonas putida HB3267 14290385 YP_007230838.1 CDS B479_20015 NC_019905.1 4415694 4415912 R hypothetical protein complement(4415694..4415912) Pseudomonas putida HB3267 14290386 YP_007230839.1 CDS B479_20020 NC_019905.1 4415962 4417161 R COG4653 Predicted phage phi-C31 gp36 major capsid-like protein; HK97 family phage major capsid protein complement(4415962..4417161) Pseudomonas putida HB3267 14290387 YP_007230840.1 CDS B479_20025 NC_019905.1 4417158 4417799 R COG3740 Phage head maturation protease; HK97 family phage prohead protease complement(4417158..4417799) Pseudomonas putida HB3267 14290388 YP_007230841.1 CDS B479_20030 NC_019905.1 4417786 4418847 R COG4695 Phage-related protein; HK97 family phage portal protein complement(4417786..4418847) Pseudomonas putida HB3267 14290389 YP_007230842.1 CDS B479_20035 NC_019905.1 4419003 4420691 R COG4626 Phage terminase-like protein, large subunit; terminase complement(4419003..4420691) Pseudomonas putida HB3267 14290390 YP_007230843.1 CDS B479_20040 NC_019905.1 4420688 4421233 R COG3728 Phage terminase, small subunit; hypothetical protein complement(4420688..4421233) Pseudomonas putida HB3267 14290391 YP_007230844.1 CDS B479_20045 NC_019905.1 4421388 4421948 R COG1403 Restriction endonuclease; hypothetical protein complement(4421388..4421948) Pseudomonas putida HB3267 14290392 YP_007230845.1 CDS B479_20050 NC_019905.1 4422032 4422370 R COG1403 Restriction endonuclease; HNH endonuclease complement(4422032..4422370) Pseudomonas putida HB3267 14290393 YP_007230846.1 CDS B479_20055 NC_019905.1 4422370 4422693 R phage holin complement(4422370..4422693) Pseudomonas putida HB3267 14290394 YP_007230847.1 CDS B479_20060 NC_019905.1 4422980 4423213 D hypothetical protein 4422980..4423213 Pseudomonas putida HB3267 14290395 YP_007230848.1 CDS B479_20065 NC_019905.1 4423210 4423437 D hypothetical protein 4423210..4423437 Pseudomonas putida HB3267 14290396 YP_007230849.1 CDS B479_20070 NC_019905.1 4423630 4423818 D hypothetical protein 4423630..4423818 Pseudomonas putida HB3267 14290397 YP_007230850.1 CDS B479_20075 NC_019905.1 4424135 4424644 R hypothetical protein complement(4424135..4424644) Pseudomonas putida HB3267 14290398 YP_007230851.1 CDS B479_20080 NC_019905.1 4425002 4425550 R hypothetical protein complement(4425002..4425550) Pseudomonas putida HB3267 14290399 YP_007230852.1 CDS B479_20085 NC_019905.1 4425547 4425846 R hypothetical protein complement(4425547..4425846) Pseudomonas putida HB3267 14290400 YP_007230853.1 CDS B479_20090 NC_019905.1 4425843 4426349 R hypothetical protein complement(4425843..4426349) Pseudomonas putida HB3267 14290401 YP_007230854.1 CDS B479_20095 NC_019905.1 4426336 4427748 R COG0305 Replicative DNA helicase; Putative DnaB-like replicative helicase complement(4426336..4427748) Pseudomonas putida HB3267 14290402 YP_007230855.1 CDS B479_20100 NC_019905.1 4427745 4429325 R COG1484 DNA replication protein; hypothetical protein complement(4427745..4429325) Pseudomonas putida HB3267 14290403 YP_007230856.1 CDS B479_20105 NC_019905.1 4429322 4429552 R hypothetical protein complement(4429322..4429552) Pseudomonas putida HB3267 14290404 YP_007230857.1 CDS B479_20110 NC_019905.1 4429549 4430112 R hypothetical protein complement(4429549..4430112) Pseudomonas putida HB3267 14290405 YP_007230858.1 CDS B479_20115 NC_019905.1 4430109 4430423 R hypothetical protein complement(4430109..4430423) Pseudomonas putida HB3267 14290406 YP_007230859.1 CDS B479_20120 NC_019905.1 4430420 4431226 R hypothetical protein complement(4430420..4431226) Pseudomonas putida HB3267 14290407 YP_007230860.1 CDS B479_20125 NC_019905.1 4431223 4431486 R hypothetical protein complement(4431223..4431486) Pseudomonas putida HB3267 14290408 YP_007230861.1 CDS B479_20130 NC_019905.1 4431483 4431773 R hypothetical protein complement(4431483..4431773) Pseudomonas putida HB3267 14290409 YP_007230862.1 CDS B479_20135 NC_019905.1 4431770 4432006 R hypothetical protein complement(4431770..4432006) Pseudomonas putida HB3267 14290410 YP_007230863.1 CDS B479_20140 NC_019905.1 4432003 4432308 R hypothetical protein complement(4432003..4432308) Pseudomonas putida HB3267 14290411 YP_007230864.1 CDS B479_20145 NC_019905.1 4432305 4432625 R hypothetical protein complement(4432305..4432625) Pseudomonas putida HB3267 14290412 YP_007230865.1 CDS B479_20150 NC_019905.1 4433311 4434057 D COG2932 Predicted transcriptional regulator; cI repressor protein 4433311..4434057 Pseudomonas putida HB3267 14290413 YP_007230866.1 CDS B479_20155 NC_019905.1 4434198 4434593 D COG2771 DNA-binding HTH domain-containing proteins; LuxR family transcriptional regulator 4434198..4434593 Pseudomonas putida HB3267 14290414 YP_007230867.1 CDS B479_20160 NC_019905.1 4434684 4435079 D COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); carbon storage regulator CsrA 4434684..4435079 Pseudomonas putida HB3267 14290415 YP_007230868.1 CDS B479_20165 NC_019905.1 4435076 4435219 D hypothetical protein 4435076..4435219 Pseudomonas putida HB3267 14290416 YP_007230869.1 CDS B479_20170 NC_019905.1 4435216 4436001 D hypothetical protein 4435216..4436001 Pseudomonas putida HB3267 14290417 YP_007230870.1 CDS B479_20175 NC_019905.1 4436004 4436411 D COG0260 Leucyl aminopeptidase; hypothetical protein 4436004..4436411 Pseudomonas putida HB3267 14290418 YP_007230871.1 CDS B479_20180 NC_019905.1 4436408 4436659 D hypothetical protein 4436408..4436659 Pseudomonas putida HB3267 14290419 YP_007230872.1 CDS B479_20185 NC_019905.1 4436949 4437926 R COG0582 Integrase; integrase family protein complement(4436949..4437926) Pseudomonas putida HB3267 14290420 YP_007230873.1 CDS B479_20190 NC_019905.1 4438217 4438927 R COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(4438217..4438927) Pseudomonas putida HB3267 14291761 YP_007230874.1 CDS B479_20195 NC_019905.1 4438958 4439716 R COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I; beta-lactamase domain-containing protein complement(4438958..4439716) Pseudomonas putida HB3267 14290422 YP_007230875.1 CDS B479_20200 NC_019905.1 4439717 4440838 R COG3317 Uncharacterized lipoprotein; lipoprotein complement(4439717..4440838) Pseudomonas putida HB3267 14290423 YP_007230876.1 CDS B479_20205 NC_019905.1 4440854 4441741 R COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthase complement(4440854..4441741) Pseudomonas putida HB3267 14290424 YP_007230877.1 CDS B479_20210 NC_019905.1 4442001 4442561 D COG2716 Glycine cleavage system regulatory protein; glycine cleavage system transcriptional repressor 4442001..4442561 Pseudomonas putida HB3267 14290425 YP_007230878.1 CDS B479_20215 NC_019905.1 4442573 4443046 D COG1225 Peroxiredoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 4442573..4443046 Pseudomonas putida HB3267 14290426 YP_007230879.1 CDS B479_20220 NC_019905.1 4443157 4444227 R COG0628 Predicted permease; hypothetical protein complement(4443157..4444227) Pseudomonas putida HB3267 14290427 YP_007230880.1 CDS B479_20225 NC_019905.1 4444247 4444486 R COG0425 Predicted redox protein, regulator of disulfide bond formation; SirA family protein complement(4444247..4444486) Pseudomonas putida HB3267 14290428 YP_007230881.1 CDS B479_20230 NC_019905.1 4444609 4446045 D COG4783 Putative Zn-dependent protease, contains TPR repeats; peptidase M48 Ste24p 4444609..4446045 Pseudomonas putida HB3267 14290429 YP_007230882.1 CDS B479_20235 NC_019905.1 4446164 4447222 R COG0379 Quinolinate synthase; quinolinate synthetase complement(4446164..4447222) Pseudomonas putida HB3267 14290430 YP_007230883.1 CDS B479_20240 NC_019905.1 4447520 4449028 R COG5339 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4447520..4449028) Pseudomonas putida HB3267 14290431 YP_007230884.1 CDS B479_20245 NC_019905.1 4449474 4450826 D COG0531 Amino acid transporters; amino acid ABC transporter permease 4449474..4450826 Pseudomonas putida HB3267 14290432 YP_007230885.1 CDS B479_20250 NC_019905.1 4450893 4452956 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4450893..4452956 Pseudomonas putida HB3267 14290433 YP_007230886.1 CDS B479_20255 NC_019905.1 4453112 4454071 D COG3965 Predicted Co/Zn/Cd cation transporters; cation efflux protein 4453112..4454071 Pseudomonas putida HB3267 14290434 YP_007230887.1 CDS B479_20260 NC_019905.1 4454442 4455116 R COG0603 Predicted PP-loop superfamily ATPase; exsB protein complement(4454442..4455116) Pseudomonas putida HB3267 14291762 YP_007230888.1 CDS B479_20265 NC_019905.1 4455134 4455781 R COG0602 Organic radical activating enzymes; radical SAM protein complement(4455134..4455781) Pseudomonas putida HB3267 14290436 YP_007230889.1 CDS B479_20270 NC_019905.1 4455942 4456748 R COG1729 Uncharacterized protein conserved in bacteria; tol-pal system protein YbgF complement(4455942..4456748) Pseudomonas putida HB3267 14290437 YP_007230890.1 CDS B479_20275 NC_019905.1 4456755 4457255 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; peptidoglycan-associated lipoprotein complement(4456755..4457255) Pseudomonas putida HB3267 14290438 YP_007230891.1 CDS tolB NC_019905.1 4457311 4458612 R COG0823 Periplasmic component of the Tol biopolymer transport system; translocation protein TolB complement(4457311..4458612) Pseudomonas putida HB3267 14290439 YP_007230892.1 CDS B479_20285 NC_019905.1 4458609 4459715 R TolA protein complement(4458609..4459715) Pseudomonas putida HB3267 14290440 YP_007230893.1 CDS B479_20290 NC_019905.1 4459715 4460167 R COG0848 Biopolymer transport protein; TolR complement(4459715..4460167) Pseudomonas putida HB3267 14290441 YP_007230894.1 CDS B479_20295 NC_019905.1 4460182 4460877 R COG0811 Biopolymer transport proteins; TolQ complement(4460182..4460877) Pseudomonas putida HB3267 14290442 YP_007230895.1 CDS B479_20300 NC_019905.1 4460880 4461332 R COG0824 Predicted thioesterase; hypothetical protein complement(4460880..4461332) Pseudomonas putida HB3267 14290443 YP_007230896.1 CDS ruvB NC_019905.1 4461458 4462504 R COG2255 Holliday junction resolvasome, helicase subunit; Holliday junction DNA helicase RuvB complement(4461458..4462504) Pseudomonas putida HB3267 14290444 YP_007230897.1 CDS ruvA NC_019905.1 4462501 4463118 R COG0632 Holliday junction resolvasome, DNA-binding subunit; Holliday junction DNA helicase RuvA complement(4462501..4463118) Pseudomonas putida HB3267 14290445 YP_007230898.1 CDS ruvC NC_019905.1 4463228 4463752 R COG0817 Holliday junction resolvasome, endonuclease subunit; Holliday junction resolvase complement(4463228..4463752) Pseudomonas putida HB3267 14290446 YP_007230899.1 CDS B479_20320 NC_019905.1 4463938 4464684 R COG0217 Uncharacterized conserved protein; hypothetical protein complement(4463938..4464684) Pseudomonas putida HB3267 14290447 YP_007230900.1 CDS aspS NC_019905.1 4464799 4466574 R COG0173 Aspartyl-tRNA synthetase; aspartyl-tRNA ligase complement(4464799..4466574) Pseudomonas putida HB3267 14290448 YP_007230901.1 CDS B479_20330 NC_019905.1 4466670 4466891 R COG2331 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4466670..4466891) Pseudomonas putida HB3267 14290449 YP_007230902.1 CDS B479_20335 NC_019905.1 4466984 4467313 R COG4321 Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis; hypothetical protein complement(4466984..4467313) Pseudomonas putida HB3267 14290450 YP_007230903.1 CDS B479_20340 NC_019905.1 4467552 4468025 R COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); ferritin Dps family protein complement(4467552..4468025) Pseudomonas putida HB3267 14290451 YP_007230904.1 CDS B479_20345 NC_019905.1 4468306 4468899 D COG1278 Cold shock proteins; cold-shock DNA-binding domain-containing protein 4468306..4468899 Pseudomonas putida HB3267 14290452 YP_007230905.1 CDS B479_20350 NC_019905.1 4468994 4469200 R COG2900 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4468994..4469200) Pseudomonas putida HB3267 14290453 YP_007230906.1 CDS B479_20355 NC_019905.1 4469202 4469621 R COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; histidine triad (HIT) protein complement(4469202..4469621) Pseudomonas putida HB3267 14290454 YP_007230907.1 CDS B479_20360 NC_019905.1 4470312 4471580 D outer membrane porin 4470312..4471580 Pseudomonas putida HB3267 14290455 YP_007230908.1 CDS B479_20365 NC_019905.1 4471741 4473456 D COG0442 Prolyl-tRNA synthetase; prolyl-tRNA ligase 4471741..4473456 Pseudomonas putida HB3267 14290456 YP_007230909.1 CDS B479_20370 NC_019905.1 4473477 4474430 D COG0642 Signal transduction histidine kinase; lipoprotein 4473477..4474430 Pseudomonas putida HB3267 14290457 YP_007230910.1 CDS B479_20375 NC_019905.1 4474591 4475655 R COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; DNA polymerase IV complement(4474591..4475655) Pseudomonas putida HB3267 14290458 YP_007230911.1 CDS B479_20380 NC_019905.1 4476417 4479059 D COG0392 Predicted integral membrane protein; hypothetical protein 4476417..4479059 Pseudomonas putida HB3267 14291764 YP_007230912.1 CDS B479_20385 NC_019905.1 4479059 4480351 D COG3946 Type IV secretory pathway, VirJ component; virulence factor family protein 4479059..4480351 Pseudomonas putida HB3267 14290460 YP_007230913.1 CDS B479_20390 NC_019905.1 4480464 4482374 R COG3158 K+ transporter; potassium transporter complement(4480464..4482374) Pseudomonas putida HB3267 14290461 YP_007230914.1 CDS rimO NC_019905.1 4482610 4483941 D COG0621 2-methylthioadenine synthetase; ribosomal protein S12 methylthiotransferase 4482610..4483941 Pseudomonas putida HB3267 14290462 YP_007230915.1 CDS B479_20400 NC_019905.1 4484013 4484675 R hypothetical protein complement(4484013..4484675) Pseudomonas putida HB3267 14290463 YP_007230916.1 CDS B479_20405 NC_019905.1 4484818 4486536 R hypothetical protein complement(4484818..4486536) Pseudomonas putida HB3267 14290464 YP_007230917.1 CDS B479_20410 NC_019905.1 4486533 4487378 R hypothetical protein complement(4486533..4487378) Pseudomonas putida HB3267 14290465 YP_007230918.1 CDS B479_20415 NC_019905.1 4487566 4488105 R hypothetical protein complement(4487566..4488105) Pseudomonas putida HB3267 14290466 YP_007230919.1 CDS B479_20420 NC_019905.1 4488435 4488887 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; acetyltransferase 4488435..4488887 Pseudomonas putida HB3267 14290467 YP_007230920.1 CDS B479_20425 NC_019905.1 4488965 4489675 D COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; RNA-binding S4 domain-containing protein 4488965..4489675 Pseudomonas putida HB3267 14290468 YP_007230921.1 CDS B479_20430 NC_019905.1 4489724 4490185 D COG4807 Uncharacterized protein conserved in bacteria; hypothetical protein 4489724..4490185 Pseudomonas putida HB3267 14290469 YP_007230922.1 CDS B479_20435 NC_019905.1 4490192 4490884 D COG1720 Uncharacterized conserved protein; hypothetical protein 4490192..4490884 Pseudomonas putida HB3267 14290470 YP_007230923.1 CDS B479_20440 NC_019905.1 4491065 4492387 R COG1301 Na+/H+-dicarboxylate symporters; C4-dicarboxylate transporter DctA complement(4491065..4492387) Pseudomonas putida HB3267 14290471 YP_007230924.1 CDS B479_20445 NC_019905.1 4492731 4494077 R COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(4492731..4494077) Pseudomonas putida HB3267 14290472 YP_007230925.1 CDS B479_20450 NC_019905.1 4494074 4494751 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component transcriptional regulator complement(4494074..4494751) Pseudomonas putida HB3267 14290473 YP_007230926.1 CDS B479_20455 NC_019905.1 4494902 4495507 R outer membrane protein H1 complement(4494902..4495507) Pseudomonas putida HB3267 14290474 YP_007230927.1 CDS B479_20460 NC_019905.1 4495637 4496428 D COG0412 Dienelactone hydrolase and related enzymes; dienelactone hydrolase 4495637..4496428 Pseudomonas putida HB3267 14290475 YP_007230928.1 CDS B479_20465 NC_019905.1 4496607 4497308 D COG2977 Phosphopantetheinyl transferase component of siderophore synthetase; 4'-phosphopantetheinyl transferase 4496607..4497308 Pseudomonas putida HB3267 14290476 YP_007230929.1 CDS B479_20470 NC_019905.1 4497312 4498919 R COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(4497312..4498919) Pseudomonas putida HB3267 14290477 YP_007230930.1 CDS B479_20475 NC_019905.1 4498916 4499614 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component transcriptional regulator complement(4498916..4499614) Pseudomonas putida HB3267 14290478 YP_007230931.1 CDS B479_20480 NC_019905.1 4500428 4503307 D COG0209 Ribonucleotide reductase, alpha subunit; ribonucleotide-diphosphate reductase subunit alpha 4500428..4503307 Pseudomonas putida HB3267 14290479 YP_007230932.1 CDS B479_20485 NC_019905.1 4503554 4504804 D COG0208 Ribonucleotide reductase, beta subunit; ribonucleotide-diphosphate reductase subunit beta 4503554..4504804 Pseudomonas putida HB3267 14290480 YP_007230933.1 CDS B479_20490 NC_019905.1 4505004 4505540 D COG3617 Prophage antirepressor; hypothetical protein 4505004..4505540 Pseudomonas putida HB3267 14290481 YP_007230934.1 CDS B479_20495 NC_019905.1 4505955 4506410 R putative lipoprotein complement(4505955..4506410) Pseudomonas putida HB3267 14290482 YP_007230935.1 CDS B479_20500 NC_019905.1 4506676 4507116 D hypothetical protein 4506676..4507116 Pseudomonas putida HB3267 14290483 YP_007230936.1 CDS B479_20505 NC_019905.1 4507181 4507843 D hypothetical protein 4507181..4507843 Pseudomonas putida HB3267 14290484 YP_007230937.1 CDS B479_20510 NC_019905.1 4507984 4508505 D COG0504 CTP synthase (UTP-ammonia lyase); hypothetical protein 4507984..4508505 Pseudomonas putida HB3267 14290485 YP_007230938.1 CDS B479_20515 NC_019905.1 4508507 4509403 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(4508507..4509403) Pseudomonas putida HB3267 14290486 YP_007230939.1 CDS B479_20520 NC_019905.1 4509778 4511814 R COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase; oxidoreductase FAD-binding protein complement(4509778..4511814) Pseudomonas putida HB3267 14290487 YP_007230940.1 CDS B479_20525 NC_019905.1 4511842 4512471 R COG0625 Glutathione S-transferase; glutathione S-transferase domain-containing protein complement(4511842..4512471) Pseudomonas putida HB3267 14290488 YP_007230941.1 CDS B479_20530 NC_019905.1 4512751 4513308 R COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA; hypothetical protein complement(4512751..4513308) Pseudomonas putida HB3267 14290489 YP_007230942.1 CDS B479_20535 NC_019905.1 4513314 4513865 R COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA; metal-binding protein complement(4513314..4513865) Pseudomonas putida HB3267 14290490 YP_007230943.1 CDS B479_20540 NC_019905.1 4513957 4514946 R COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; asparaginase/glutaminase complement(4513957..4514946) Pseudomonas putida HB3267 14290491 YP_007230944.1 CDS B479_20545 NC_019905.1 4514943 4516097 R hypothetical protein complement(4514943..4516097) Pseudomonas putida HB3267 14290492 YP_007230945.1 CDS B479_20550 NC_019905.1 4516108 4517004 R COG0388 Predicted amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(4516108..4517004) Pseudomonas putida HB3267 14290493 YP_007230946.1 CDS B479_20555 NC_019905.1 4517972 4519615 R COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; acetolactate synthase complement(4517972..4519615) Pseudomonas putida HB3267 14290494 YP_007230947.1 CDS B479_20560 NC_019905.1 4525370 4526266 D COG2116 Formate/nitrite family of transporters; formate/nitrate transporter 4525370..4526266 Pseudomonas putida HB3267 14291787 YP_007230948.1 CDS B479_20565 NC_019905.1 4526270 4527361 R COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold; zinc-dependent hydrolase complement(4526270..4527361) Pseudomonas putida HB3267 14290496 YP_007230949.1 CDS B479_20570 NC_019905.1 4527483 4528565 D COG2199 FOG: GGDEF domain; diguanylate cyclase 4527483..4528565 Pseudomonas putida HB3267 14290497 YP_007230950.1 CDS B479_20575 NC_019905.1 4528617 4531202 D COG2199 FOG: GGDEF domain; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 4528617..4531202 Pseudomonas putida HB3267 14290498 YP_007230951.1 CDS B479_20580 NC_019905.1 4531245 4531574 R hypothetical protein complement(4531245..4531574) Pseudomonas putida HB3267 14290499 YP_007230952.1 CDS B479_20585 NC_019905.1 4531698 4532606 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(4531698..4532606) Pseudomonas putida HB3267 14290500 YP_007230953.1 CDS B479_20590 NC_019905.1 4532719 4533477 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain dehydrogenase/reductase SDR 4532719..4533477 Pseudomonas putida HB3267 14290501 YP_007230954.1 CDS B479_20595 NC_019905.1 4533517 4534386 R COG1566 Multidrug resistance efflux pump; secretion protein HlyD family protein complement(4533517..4534386) Pseudomonas putida HB3267 14290502 YP_007230955.1 CDS B479_20600 NC_019905.1 4534399 4534605 R hypothetical protein complement(4534399..4534605) Pseudomonas putida HB3267 14290503 YP_007230956.1 CDS B479_20605 NC_019905.1 4534592 4536580 R COG1289 Predicted membrane protein; fusaric acid resistance protein region complement(4534592..4536580) Pseudomonas putida HB3267 14290504 YP_007230957.1 CDS B479_20610 NC_019905.1 4536853 4536969 R hypothetical protein complement(4536853..4536969) Pseudomonas putida HB3267 14290505 YP_007230958.1 CDS B479_20615 NC_019905.1 4537105 4537266 R hypothetical protein complement(4537105..4537266) Pseudomonas putida HB3267 14290506 YP_007230959.1 CDS B479_20620 NC_019905.1 4537334 4537663 R hypothetical protein complement(4537334..4537663) Pseudomonas putida HB3267 14290507 YP_007230960.1 CDS B479_20625 NC_019905.1 4537727 4538422 R hypothetical protein complement(4537727..4538422) Pseudomonas putida HB3267 14290508 YP_007230961.1 CDS B479_20630 NC_019905.1 4538584 4541430 D COG0553 Superfamily II DNA/RNA helicases, SNF2 family; ATP-dependent helicase HepA 4538584..4541430 Pseudomonas putida HB3267 14290509 YP_007230962.1 CDS B479_20645 NC_019905.1 4543886 4544773 R COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; 3-hydroxyisobutyrate dehydrogenase complement(4543886..4544773) Pseudomonas putida HB3267 14290510 YP_007230963.1 CDS B479_20650 NC_019905.1 4545082 4545393 R COG5626 Uncharacterized conserved small protein; hypothetical protein complement(4545082..4545393) Pseudomonas putida HB3267 14290511 YP_007230964.1 CDS B479_20655 NC_019905.1 4545753 4546868 D COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component; leucine ABC transporter subunit substrate-binding protein LivK 4545753..4546868 Pseudomonas putida HB3267 14290512 YP_007230965.1 CDS B479_20660 NC_019905.1 4547054 4547977 D COG0559 Branched-chain amino acid ABC-type transport system, permease components; inner-membrane translocator 4547054..4547977 Pseudomonas putida HB3267 14290513 YP_007230966.1 CDS livM NC_019905.1 4547974 4549230 D COG4177 ABC-type branched-chain amino acid transport system, permease component; leucine/isoleucine/valine transporter permease subunit 4547974..4549230 Pseudomonas putida HB3267 14290514 YP_007230967.1 CDS livG NC_019905.1 4549227 4549994 D COG0411 ABC-type branched-chain amino acid transport systems, ATPase component; leucine/isoleucine/valine transporter ATP-binding subunit 4549227..4549994 Pseudomonas putida HB3267 14290515 YP_007230968.1 CDS B479_20675 NC_019905.1 4549995 4550696 D COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; branched chain amino acid ABC transporter ATP-binding protein 4549995..4550696 Pseudomonas putida HB3267 14290516 YP_007230969.1 CDS B479_20680 NC_019905.1 4550940 4551614 D COG3650 Predicted membrane protein; lipoprotein 4550940..4551614 Pseudomonas putida HB3267 14290517 YP_007230970.1 CDS B479_20685 NC_019905.1 4551718 4553325 D COG2509 Uncharacterized FAD-dependent dehydrogenases; FAD dependent oxidoreductase 4551718..4553325 Pseudomonas putida HB3267 14290518 YP_007230971.1 CDS nhaA NC_019905.1 4553575 4554750 D COG3004 Na+/H+ antiporter; pH-dependent sodium/proton antiporter 4553575..4554750 Pseudomonas putida HB3267 14290519 YP_007230972.1 CDS B479_20695 NC_019905.1 4554820 4555284 R COG3133 Outer membrane lipoprotein; 17 kDa surface antigen complement(4554820..4555284) Pseudomonas putida HB3267 14290520 YP_007230973.1 CDS B479_20700 NC_019905.1 4555431 4555664 D hypothetical protein 4555431..4555664 Pseudomonas putida HB3267 14290521 YP_007230974.1 CDS B479_20705 NC_019905.1 4555705 4556352 R COG0259 Pyridoxamine-phosphate oxidase; pyridoxamine 5'-phosphate oxidase complement(4555705..4556352) Pseudomonas putida HB3267 14290522 YP_007230975.1 CDS B479_20710 NC_019905.1 4556371 4557348 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; OmpA/MotB domain-containing protein complement(4556371..4557348) Pseudomonas putida HB3267 14290523 YP_007230976.1 CDS B479_20715 NC_019905.1 4557448 4558593 R COG1680 Beta-lactamase class C and other penicillin binding proteins; beta-lactamase complement(4557448..4558593) Pseudomonas putida HB3267 14290524 YP_007230977.1 CDS B479_20720 NC_019905.1 4558851 4561085 R beta-agarase complement(4558851..4561085) Pseudomonas putida HB3267 14290525 YP_007230978.1 CDS dinG NC_019905.1 4561167 4563311 R COG1199 Rad3-related DNA helicases; ATP-dependent DNA helicase DinG complement(4561167..4563311) Pseudomonas putida HB3267 14290526 YP_007230979.1 CDS B479_20730 NC_019905.1 4563410 4563874 D COG5615 Predicted integral membrane protein; hypothetical protein 4563410..4563874 Pseudomonas putida HB3267 14290527 YP_007230980.1 CDS B479_20735 NC_019905.1 4564026 4564784 R hypothetical protein complement(4564026..4564784) Pseudomonas putida HB3267 14290528 YP_007230981.1 CDS B479_20740 NC_019905.1 4564777 4565052 R COG3776 Predicted membrane protein; hypothetical protein complement(4564777..4565052) Pseudomonas putida HB3267 14290529 YP_007230982.1 CDS B479_20745 NC_019905.1 4565151 4565870 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; OmpA/MotB domain-containing protein complement(4565151..4565870) Pseudomonas putida HB3267 14290530 YP_007230983.1 CDS B479_20750 NC_019905.1 4565960 4566652 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; OmpA/MotB domain-containing protein complement(4565960..4566652) Pseudomonas putida HB3267 14290531 YP_007230984.1 CDS B479_20755 NC_019905.1 4566812 4567306 D hypothetical protein 4566812..4567306 Pseudomonas putida HB3267 14290532 YP_007230985.1 CDS B479_20760 NC_019905.1 4567309 4567785 D COG3012 Uncharacterized protein conserved in bacteria; hypothetical protein 4567309..4567785 Pseudomonas putida HB3267 14290533 YP_007230986.1 CDS B479_20765 NC_019905.1 4567788 4568273 D COG5608 Conserved secreted protein; water stress/hypersensitive response domain-containing protein 4567788..4568273 Pseudomonas putida HB3267 14290534 YP_007230987.1 CDS B479_20770 NC_019905.1 4568281 4568478 D COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); SecC motif-containing protein 4568281..4568478 Pseudomonas putida HB3267 14290535 YP_007230988.1 CDS B479_20775 NC_019905.1 4568533 4569729 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(4568533..4569729) Pseudomonas putida HB3267 14290536 YP_007230989.1 CDS B479_20780 NC_019905.1 4569884 4571224 D COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; GntR family transcriptional regulator 4569884..4571224 Pseudomonas putida HB3267 14290537 YP_007230990.1 CDS B479_20785 NC_019905.1 4571412 4573853 D COG2366 Protein related to penicillin acylase; penicillin amidase 4571412..4573853 Pseudomonas putida HB3267 14290538 YP_007230991.1 CDS B479_20790 NC_019905.1 4573959 4574300 D hypothetical protein 4573959..4574300 Pseudomonas putida HB3267 14290539 YP_007230992.1 CDS B479_20795 NC_019905.1 4574399 4575415 D COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing; exonuclease 4574399..4575415 Pseudomonas putida HB3267 14290540 YP_007230993.1 CDS B479_20800 NC_019905.1 4575412 4577070 D COG1793 ATP-dependent DNA ligase; ATP-dependent DNA ligase 4575412..4577070 Pseudomonas putida HB3267 14290541 YP_007230994.1 CDS B479_20805 NC_019905.1 4577294 4578409 D COG3608 Predicted deacylase; succinylglutamate desuccinylase/aspartoacylase 4577294..4578409 Pseudomonas putida HB3267 14290542 YP_007230995.1 CDS B479_20810 NC_019905.1 4578477 4580930 D COG1201 Lhr-like helicases; DEAD/DEAH box helicase 4578477..4580930 Pseudomonas putida HB3267 14290543 YP_007230996.1 CDS B479_20815 NC_019905.1 4580927 4581580 D COG1407 Predicted ICC-like phosphoesterases; putative ICC-like protein phosphoesterase 4580927..4581580 Pseudomonas putida HB3267 14290544 YP_007230997.1 CDS B479_20820 NC_019905.1 4581591 4581818 R hypothetical protein complement(4581591..4581818) Pseudomonas putida HB3267 14290545 YP_007230998.1 CDS dcd NC_019905.1 4581912 4582478 R COG0717 Deoxycytidine deaminase; deoxycytidine triphosphate deaminase complement(4581912..4582478) Pseudomonas putida HB3267 14290546 YP_007230999.1 CDS B479_20830 NC_019905.1 4582807 4583016 D COG1278 Cold shock proteins; CapB 4582807..4583016 Pseudomonas putida HB3267 14290547 YP_007231000.1 CDS B479_20835 NC_019905.1 4583141 4584235 R COG0489 ATPases involved in chromosome partitioning; ATP-binding Mrp/Nbp35 family protein complement(4583141..4584235) Pseudomonas putida HB3267 14290548 YP_007231001.1 CDS metG NC_019905.1 4584394 4586433 D COG0143 Methionyl-tRNA synthetase; methionyl-tRNA ligase 4584394..4586433 Pseudomonas putida HB3267 14290549 YP_007231002.1 CDS B479_20845 NC_019905.1 4586599 4587147 D COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA; electron transport complex protein RnfA 4586599..4587147 Pseudomonas putida HB3267 14290550 YP_007231003.1 CDS B479_20850 NC_019905.1 4587144 4588118 D COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD; RnfABCDGE type electron transport complex subunit D 4587144..4588118 Pseudomonas putida HB3267 14290551 YP_007231004.1 CDS B479_20855 NC_019905.1 4588115 4588717 D COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG; RnfABCDGE type electron transport complex subunit G 4588115..4588717 Pseudomonas putida HB3267 14290552 YP_007231005.1 CDS B479_20860 NC_019905.1 4588710 4589234 D hypothetical protein 4588710..4589234 Pseudomonas putida HB3267 14290553 YP_007231006.1 CDS B479_20865 NC_019905.1 4589239 4589877 D COG0177 Predicted EndoIII-related endonuclease; endonuclease III 4589239..4589877 Pseudomonas putida HB3267 14290554 YP_007231007.1 CDS B479_20870 NC_019905.1 4589982 4590158 D hypothetical protein 4589982..4590158 Pseudomonas putida HB3267 14290555 YP_007231008.1 CDS B479_20875 NC_019905.1 4590202 4590822 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; two component LuxR family transcriptional regulator complement(4590202..4590822) Pseudomonas putida HB3267 14290556 YP_007231009.1 CDS B479_20880 NC_019905.1 4591185 4591667 D hypothetical protein 4591185..4591667 Pseudomonas putida HB3267 14290557 YP_007231010.1 CDS B479_20885 NC_019905.1 4591726 4592943 R COG0137 Argininosuccinate synthase; argininosuccinate synthase complement(4591726..4592943) Pseudomonas putida HB3267 14290558 YP_007231011.1 CDS B479_20890 NC_019905.1 4593100 4594017 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; OmpA/MotB domain-containing protein complement(4593100..4594017) Pseudomonas putida HB3267 14290559 YP_007231012.1 CDS B479_20895 NC_019905.1 4594148 4595194 D COG0418 Dihydroorotase; dihydroorotase 4594148..4595194 Pseudomonas putida HB3267 14290560 YP_007231013.1 CDS B479_20900 NC_019905.1 4595191 4595865 D COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; ribonuclease T 4595191..4595865 Pseudomonas putida HB3267 14290561 YP_007231014.1 CDS B479_20905 NC_019905.1 4596025 4596627 R COG0450 Peroxiredoxin; Anti-oxidant AhpCTSA family protein complement(4596025..4596627) Pseudomonas putida HB3267 14290562 YP_007231015.1 CDS B479_20910 NC_019905.1 4596624 4596809 R hypothetical protein complement(4596624..4596809) Pseudomonas putida HB3267 14290563 YP_007231016.1 CDS B479_20915 NC_019905.1 4596852 4597070 D COG2906 Bacterioferritin-associated ferredoxin; BFD (2Fe-2S)-binding domain-containing protein 4596852..4597070 Pseudomonas putida HB3267 14290564 YP_007231017.1 CDS B479_20920 NC_019905.1 4597272 4597745 D COG2193 Bacterioferritin (cytochrome b1); bacterioferritin 4597272..4597745 Pseudomonas putida HB3267 14290565 YP_007231018.1 CDS B479_20925 NC_019905.1 4597803 4598138 R COG0278 Glutaredoxin-related protein; glutaredoxin-like protein complement(4597803..4598138) Pseudomonas putida HB3267 14290566 YP_007231019.1 CDS B479_20930 NC_019905.1 4598230 4600338 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; molybdopterin dinucleotide-binding protein complement(4598230..4600338) Pseudomonas putida HB3267 14290567 YP_007231020.1 CDS B479_20935 NC_019905.1 4600736 4601656 D COG0078 Ornithine carbamoyltransferase; ornithine carbamoyltransferase 4600736..4601656 Pseudomonas putida HB3267 14290568 YP_007231021.1 CDS B479_20940 NC_019905.1 4601653 4602762 D COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; ABC transporter ATP-binding protein 4601653..4602762 Pseudomonas putida HB3267 14290569 YP_007231022.1 CDS B479_20945 NC_019905.1 4602884 4603354 R COG2606 Uncharacterized conserved protein; YbaK/EbsC protein complement(4602884..4603354) Pseudomonas putida HB3267 14290570 YP_007231023.1 CDS B479_20950 NC_019905.1 4603659 4604510 D COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); MIP family channel protein 4603659..4604510 Pseudomonas putida HB3267 14290571 YP_007231024.1 CDS glpK NC_019905.1 4604562 4606061 D COG0554 Glycerol kinase; glycerol kinase 4604562..4606061 Pseudomonas putida HB3267 14290572 YP_007231025.1 CDS B479_20960 NC_019905.1 4606338 4607093 D COG1349 Transcriptional regulators of sugar metabolism; DeoR family transcriptional regulator 4606338..4607093 Pseudomonas putida HB3267 14290573 YP_007231026.1 CDS glpD NC_019905.1 4607346 4608878 D COG0578 Glycerol-3-phosphate dehydrogenase; glycerol-3-phosphate dehydrogenase 4607346..4608878 Pseudomonas putida HB3267 14290574 YP_007231027.1 CDS B479_20970 NC_019905.1 4608998 4613146 D COG4886 Leucine-rich repeat (LRR) protein; hypothetical protein 4608998..4613146 Pseudomonas putida HB3267 14290575 YP_007231028.1 CDS B479_20975 NC_019905.1 4613468 4614385 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; extracellular solute-binding protein 4613468..4614385 Pseudomonas putida HB3267 14290576 YP_007231029.1 CDS B479_20980 NC_019905.1 4614527 4615273 D COG0765 ABC-type amino acid transport system, permease component; glutamate/aspartate ABC transporter permease 4614527..4615273 Pseudomonas putida HB3267 14290577 YP_007231030.1 CDS B479_20985 NC_019905.1 4615274 4615945 D COG0765 ABC-type amino acid transport system, permease component; polar amino acid ABC transporter inner membrane subunit 4615274..4615945 Pseudomonas putida HB3267 14290578 YP_007231031.1 CDS B479_20990 NC_019905.1 4615942 4616676 D COG1126 ABC-type polar amino acid transport system, ATPase component; glutamate-aspartate ABC transporter ATP-binding protein 4615942..4616676 Pseudomonas putida HB3267 14290579 YP_007231032.1 CDS B479_20995 NC_019905.1 4616749 4618653 D COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; integral membrane sensor signal transduction histidine kinase 4616749..4618653 Pseudomonas putida HB3267 14290580 YP_007231033.1 CDS B479_21000 NC_019905.1 4618650 4619978 D COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; two component sigma54 specific Fis family transcriptional regulator 4618650..4619978 Pseudomonas putida HB3267 14290581 YP_007231034.1 CDS B479_21005 NC_019905.1 4620004 4620339 D COG3136 Uncharacterized membrane protein required for alginate biosynthesis; GlpM family protein 4620004..4620339 Pseudomonas putida HB3267 14290582 YP_007231035.1 CDS B479_21010 NC_019905.1 4620508 4621503 R COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold family protein complement(4620508..4621503) Pseudomonas putida HB3267 14290583 YP_007231036.1 CDS B479_21015 NC_019905.1 4621700 4622617 D COG0583 Transcriptional regulator; transcriptional regulator MetR 4621700..4622617 Pseudomonas putida HB3267 14290584 YP_007231037.1 CDS B479_21020 NC_019905.1 4622601 4623014 R COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; NUDIX hydrolase complement(4622601..4623014) Pseudomonas putida HB3267 14290585 YP_007231038.1 CDS B479_21025 NC_019905.1 4623241 4627509 D COG1201 Lhr-like helicases; DEAD/DEAH box helicase 4623241..4627509 Pseudomonas putida HB3267 14290586 YP_007231039.1 CDS B479_21030 NC_019905.1 4627787 4629406 D COG0069 Glutamate synthase domain 2; glutamate synthase 4627787..4629406 Pseudomonas putida HB3267 14290587 YP_007231040.1 CDS B479_21035 NC_019905.1 4629550 4630968 R COG1113 Gamma-aminobutyrate permease and related permeases; amino acid permease-associated protein complement(4629550..4630968) Pseudomonas putida HB3267 14290588 YP_007231041.1 CDS B479_21040 NC_019905.1 4631584 4634595 D COG0744 Membrane carboxypeptidase (penicillin-binding protein); membrane carboxypeptidase 4631584..4634595 Pseudomonas putida HB3267 14290589 YP_007231042.1 CDS B479_21045 NC_019905.1 4634685 4635230 D COG1695 Predicted transcriptional regulators; PadR-like family transcriptional regulator 4634685..4635230 Pseudomonas putida HB3267 14290590 YP_007231043.1 CDS B479_21050 NC_019905.1 4635223 4635984 D COG2375 Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain-containing protein 4635223..4635984 Pseudomonas putida HB3267 14290591 YP_007231044.1 CDS B479_21055 NC_019905.1 4636268 4636903 R hypothetical protein complement(4636268..4636903) Pseudomonas putida HB3267 14290592 YP_007231045.1 CDS B479_21060 NC_019905.1 4636905 4637126 R COG4628 Uncharacterized conserved protein; hypothetical protein complement(4636905..4637126) Pseudomonas putida HB3267 14290593 YP_007231046.1 CDS B479_21065 NC_019905.1 4637292 4639343 D COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent receptor 4637292..4639343 Pseudomonas putida HB3267 14290594 YP_007231047.1 CDS B479_21070 NC_019905.1 4639659 4640993 D COG3659 Carbohydrate-selective porin; carbohydrate-selective porin OprB 4639659..4640993 Pseudomonas putida HB3267 14290595 YP_007231048.1 CDS B479_21075 NC_019905.1 4641024 4643435 D COG4993 Glucose dehydrogenase; glucose dehydrogenase 4641024..4643435 Pseudomonas putida HB3267 14290596 YP_007231049.1 CDS B479_21080 NC_019905.1 4643672 4646092 D COG0466 ATP-dependent Lon protease, bacterial type; ATP-dependent protease La 4643672..4646092 Pseudomonas putida HB3267 14290597 YP_007231050.1 CDS B479_21085 NC_019905.1 4646263 4646655 D COG5513 Predicted secreted protein; putative lipoprotein 4646263..4646655 Pseudomonas putida HB3267 14290598 YP_007231051.1 CDS B479_21090 NC_019905.1 4646803 4647546 D COG0500 SAM-dependent methyltransferases; methyltransferase 4646803..4647546 Pseudomonas putida HB3267 14290599 YP_007231052.1 CDS B479_21095 NC_019905.1 4647543 4648499 D COG0500 SAM-dependent methyltransferases; tRNA mo(5)U34 methyltransferase 4647543..4648499 Pseudomonas putida HB3267 14290600 YP_007231053.1 CDS B479_21100 NC_019905.1 4648569 4648772 R hypothetical protein complement(4648569..4648772) Pseudomonas putida HB3267 14290601 YP_007231054.1 CDS B479_21105 NC_019905.1 4649122 4649796 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component heavy metal response transcriptional regulator 4649122..4649796 Pseudomonas putida HB3267 14290602 YP_007231055.1 CDS B479_21110 NC_019905.1 4649793 4651175 D COG0642 Signal transduction histidine kinase; heavy metal sensor signal transduction histidine kinase 4649793..4651175 Pseudomonas putida HB3267 14290603 YP_007231056.1 CDS B479_21115 NC_019905.1 4651241 4651981 R COG0854 Pyridoxal phosphate biosynthesis protein; pyridoxine 5'-phosphate synthase complement(4651241..4651981) Pseudomonas putida HB3267 14290604 YP_007231057.1 CDS recO NC_019905.1 4652025 4652708 R COG1381 Recombinational DNA repair protein (RecF pathway); DNA repair protein RecO complement(4652025..4652708) Pseudomonas putida HB3267 14290605 YP_007231058.1 CDS era NC_019905.1 4652879 4653781 R COG1159 GTPase; GTPase Era complement(4652879..4653781) Pseudomonas putida HB3267 14290606 YP_007231059.1 CDS rnc NC_019905.1 4653774 4654463 R COG0571 dsRNA-specific ribonuclease; ribonuclease III complement(4653774..4654463) Pseudomonas putida HB3267 14290607 YP_007231060.1 CDS B479_21135 NC_019905.1 4654625 4655479 R COG0681 Signal peptidase I; signal peptidase I complement(4654625..4655479) Pseudomonas putida HB3267 14290608 YP_007231061.1 CDS B479_21140 NC_019905.1 4655485 4657275 R COG0481 Membrane GTPase LepA; GTP-binding protein LepA complement(4655485..4657275) Pseudomonas putida HB3267 14290609 YP_007231062.1 CDS B479_21145 NC_019905.1 4657487 4658680 D hypothetical protein 4657487..4658680 Pseudomonas putida HB3267 14290610 YP_007231063.1 CDS B479_21150 NC_019905.1 4658760 4660193 R COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; protease Do complement(4658760..4660193) Pseudomonas putida HB3267 14290611 YP_007231064.1 CDS B479_21155 NC_019905.1 4660383 4661345 R COG3026 Negative regulator of sigma E activity; sigma E regulatory protein MucB/RseB complement(4660383..4661345) Pseudomonas putida HB3267 14290612 YP_007231065.1 CDS B479_21160 NC_019905.1 4661358 4661948 R COG3073 Negative regulator of sigma E activity; anti sigma-E protein, RseA complement(4661358..4661948) Pseudomonas putida HB3267 14290613 YP_007231066.1 CDS algU NC_019905.1 4661980 4662561 R COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; RNA polymerase sigma factor AlgU complement(4661980..4662561) Pseudomonas putida HB3267 14290614 YP_007231067.1 CDS B479_21170 NC_019905.1 4662996 4664600 D COG0029 Aspartate oxidase; L-aspartate oxidase 4662996..4664600 Pseudomonas putida HB3267 14290615 YP_007231068.1 CDS B479_21175 NC_019905.1 4664701 4665165 R hypothetical protein complement(4664701..4665165) Pseudomonas putida HB3267 14290616 YP_007231069.1 CDS B479_21180 NC_019905.1 4665149 4665403 R COG2938 Uncharacterized conserved protein; hypothetical protein complement(4665149..4665403) Pseudomonas putida HB3267 14290617 YP_007231070.1 CDS B479_21185 NC_019905.1 4665537 4666478 D COG0354 Predicted aminomethyltransferase related to GcvT; glycine cleavage T protein (aminomethyl transferase) 4665537..4666478 Pseudomonas putida HB3267 14290618 YP_007231071.1 CDS B479_21190 NC_019905.1 4666534 4667340 D COG1639 Predicted signal transduction protein; putative signal transduction protein 4666534..4667340 Pseudomonas putida HB3267 14290619 YP_007231072.1 CDS B479_21195 NC_019905.1 4667467 4668846 R COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(4667467..4668846) Pseudomonas putida HB3267 14290620 YP_007231073.1 CDS B479_21200 NC_019905.1 4668839 4669510 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component transcriptional regulator complement(4668839..4669510) Pseudomonas putida HB3267 14290621 YP_007231074.1 CDS B479_21205 NC_019905.1 4669711 4671000 D outer membrane porin 4669711..4671000 Pseudomonas putida HB3267 14290622 YP_007231075.1 CDS B479_21210 NC_019905.1 4671047 4672027 D COG3181 Uncharacterized protein conserved in bacteria; tricarboxylate transport protein TctC 4671047..4672027 Pseudomonas putida HB3267 14290623 YP_007231076.1 CDS B479_21215 NC_019905.1 4672206 4672664 D putative tricarboxylate transport protein TctB 4672206..4672664 Pseudomonas putida HB3267 14290624 YP_007231077.1 CDS B479_21220 NC_019905.1 4672668 4674182 D COG3333 Uncharacterized protein conserved in bacteria; putative tricarboxylate transport protein TctA 4672668..4674182 Pseudomonas putida HB3267 14290625 YP_007231078.1 CDS B479_21225 NC_019905.1 4674175 4675206 D COG3180 Putative ammonia monooxygenase; putative ammonia monooxygenase 4674175..4675206 Pseudomonas putida HB3267 14290626 YP_007231079.1 CDS B479_21230 NC_019905.1 4675327 4676019 R COG0692 Uracil DNA glycosylase; uracil-DNA glycosylase complement(4675327..4676019) Pseudomonas putida HB3267 14290627 YP_007231080.1 CDS B479_21235 NC_019905.1 4676146 4677252 D COG1024 Enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase/isomerase 4676146..4677252 Pseudomonas putida HB3267 14290628 YP_007231081.1 CDS B479_21240 NC_019905.1 4677400 4677852 R lipoprotein complement(4677400..4677852) Pseudomonas putida HB3267 14290629 YP_007231082.1 CDS B479_21245 NC_019905.1 4677996 4678208 D hypothetical protein 4677996..4678208 Pseudomonas putida HB3267 14290630 YP_007231083.1 CDS B479_21250 NC_019905.1 4678218 4678910 D COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; pseudouridine synthase 4678218..4678910 Pseudomonas putida HB3267 14290631 YP_007231084.1 CDS B479_21255 NC_019905.1 4679341 4680228 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); (R)-3-hydroxydecanoyl-ACP:CoA transacylase 4679341..4680228 Pseudomonas putida HB3267 14290632 YP_007231085.1 CDS B479_21265 NC_019905.1 4680579 4682285 D COG0659 Sulfate permease and related transporters (MFS superfamily); sulfate transporter 4680579..4682285 Pseudomonas putida HB3267 14291765 YP_007231086.1 CDS B479_21270 NC_019905.1 4682501 4683511 D hypothetical protein 4682501..4683511 Pseudomonas putida HB3267 14290634 YP_007231087.1 CDS B479_21275 NC_019905.1 4683890 4684933 R COG0457 FOG: TPR repeat; hypothetical protein complement(4683890..4684933) Pseudomonas putida HB3267 14290635 YP_007231088.1 CDS B479_21280 NC_019905.1 4684935 4685903 R COG2064 Flp pilus assembly protein TadC; type II secretion system protein membrane protein complement(4684935..4685903) Pseudomonas putida HB3267 14290636 YP_007231089.1 CDS B479_21285 NC_019905.1 4685930 4686916 R COG4965 Flp pilus assembly protein TadB; protein TadB complement(4685930..4686916) Pseudomonas putida HB3267 14290637 YP_007231090.1 CDS B479_21290 NC_019905.1 4686913 4688250 R COG4962 Flp pilus assembly protein, ATPase CpaF; pilus assembly protein complement(4686913..4688250) Pseudomonas putida HB3267 14290638 YP_007231091.1 CDS B479_21295 NC_019905.1 4688359 4689525 R COG0784 FOG: CheY-like receiver; CheY family response regulator complement(4688359..4689525) Pseudomonas putida HB3267 14290639 YP_007231092.1 CDS B479_21300 NC_019905.1 4689570 4690073 R membrane protein complement(4689570..4690073) Pseudomonas putida HB3267 14290640 YP_007231093.1 CDS B479_21305 NC_019905.1 4690073 4690543 R COG4961 Flp pilus assembly protein TadG; hypothetical protein complement(4690073..4690543) Pseudomonas putida HB3267 14290641 YP_007231094.1 CDS B479_21310 NC_019905.1 4690553 4691875 R Von Willebrand factor type A domain protein, associated with Flp pilus assembly complement(4690553..4691875) Pseudomonas putida HB3267 14290642 YP_007231095.1 CDS B479_21315 NC_019905.1 4691907 4692173 R hypothetical protein complement(4691907..4692173) Pseudomonas putida HB3267 14290643 YP_007231096.1 CDS B479_21320 NC_019905.1 4692198 4693685 R COG4964 Flp pilus assembly protein, secretin CpaC; type II and III secretion system protein complement(4692198..4693685) Pseudomonas putida HB3267 14290644 YP_007231097.1 CDS B479_21325 NC_019905.1 4693773 4694585 R COG3745 Flp pilus assembly protein CpaB; hypothetical protein complement(4693773..4694585) Pseudomonas putida HB3267 14290645 YP_007231098.1 CDS B479_21330 NC_019905.1 4694598 4695932 R COG0606 Predicted ATPase with chaperone activity; hypothetical protein complement(4694598..4695932) Pseudomonas putida HB3267 14290646 YP_007231099.1 CDS B479_21335 NC_019905.1 4695948 4696466 R COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases; protein TadV/CpaA complement(4695948..4696466) Pseudomonas putida HB3267 14290647 YP_007231100.1 CDS B479_21340 NC_019905.1 4696496 4696687 R hypothetical protein complement(4696496..4696687) Pseudomonas putida HB3267 14290648 YP_007231101.1 CDS B479_21345 NC_019905.1 4697136 4698014 D COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; YesN family response regulator 4697136..4698014 Pseudomonas putida HB3267 14290649 YP_007231102.1 CDS B479_21350 NC_019905.1 4697999 4698499 R hypothetical protein complement(4697999..4698499) Pseudomonas putida HB3267 14290650 YP_007231103.1 CDS B479_21355 NC_019905.1 4698975 4700189 R COG0500 SAM-dependent methyltransferases; hypothetical protein complement(4698975..4700189) Pseudomonas putida HB3267 14290651 YP_007231104.1 CDS B479_21360 NC_019905.1 4700448 4701065 R COG3762 Predicted membrane protein; hypothetical protein complement(4700448..4701065) Pseudomonas putida HB3267 14290652 YP_007231105.1 CDS B479_21365 NC_019905.1 4701282 4703543 D COG1472 Beta-glucosidase-related glycosidases; beta-D-glucoside glucohydrolase 4701282..4703543 Pseudomonas putida HB3267 14290653 YP_007231106.1 CDS B479_21370 NC_019905.1 4703630 4705387 D COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; integral membrane sensor signal transduction histidine kinase 4703630..4705387 Pseudomonas putida HB3267 14290654 YP_007231107.1 CDS B479_21375 NC_019905.1 4705381 4706715 D COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; two component sigma-54 specific Fis family transcriptional regulator 4705381..4706715 Pseudomonas putida HB3267 14290655 YP_007231108.1 CDS B479_21380 NC_019905.1 4706994 4708313 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily metabolite/H(+) symporter 4706994..4708313 Pseudomonas putida HB3267 14290656 YP_007231109.1 CDS B479_21385 NC_019905.1 4708581 4709333 R COG4705 Uncharacterized membrane-anchored protein conserved in bacteria; hypothetical protein complement(4708581..4709333) Pseudomonas putida HB3267 14290657 YP_007231110.1 CDS B479_21390 NC_019905.1 4709678 4710043 D hypothetical protein 4709678..4710043 Pseudomonas putida HB3267 14290658 YP_007231111.1 CDS B479_21395 NC_019905.1 4710162 4710767 D COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family; hypothetical protein 4710162..4710767 Pseudomonas putida HB3267 14290659 YP_007231112.1 CDS B479_21400 NC_019905.1 4710768 4711034 R hypothetical protein complement(4710768..4711034) Pseudomonas putida HB3267 14290660 YP_007231113.1 CDS B479_21405 NC_019905.1 4711165 4711458 R COG1359 Uncharacterized conserved protein; antibiotic biosynthesis monooxygenase complement(4711165..4711458) Pseudomonas putida HB3267 14290661 YP_007231114.1 CDS B479_21410 NC_019905.1 4711661 4712581 D COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator 4711661..4712581 Pseudomonas putida HB3267 14290662 YP_007231115.1 CDS B479_21415 NC_019905.1 4712717 4714354 R COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; hypothetical protein complement(4712717..4714354) Pseudomonas putida HB3267 14290663 YP_007231116.1 CDS B479_21420 NC_019905.1 4714469 4715344 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 4714469..4715344 Pseudomonas putida HB3267 14290664 YP_007231117.1 CDS B479_21425 NC_019905.1 4715381 4715995 R COG2910 Putative NADH-flavin reductase; NAD-dependent epimerase/dehydratase complement(4715381..4715995) Pseudomonas putida HB3267 14290665 YP_007231118.1 CDS B479_21430 NC_019905.1 4716023 4716898 R COG0491 Zn-dependent hydrolases, including glyoxylases; beta-lactamase domain-containing protein complement(4716023..4716898) Pseudomonas putida HB3267 14290666 YP_007231119.1 CDS B479_21435 NC_019905.1 4717002 4717907 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 4717002..4717907 Pseudomonas putida HB3267 14290667 YP_007231120.1 CDS B479_21440 NC_019905.1 4717933 4718802 R COG2513 PEP phosphonomutase and related enzymes; putative carboxyphosphonoenolpyruvate phosphonomutase complement(4717933..4718802) Pseudomonas putida HB3267 14290668 YP_007231121.1 CDS B479_21445 NC_019905.1 4719243 4720694 D COG0477 Permeases of the major facilitator superfamily; EmrB/QacA family drug resistance transporter 4719243..4720694 Pseudomonas putida HB3267 14290669 YP_007231122.1 CDS B479_21450 NC_019905.1 4720916 4721548 R COG1309 Transcriptional regulator; TetR family transcriptional regulator complement(4720916..4721548) Pseudomonas putida HB3267 14290670 YP_007231123.1 CDS B479_21455 NC_019905.1 4721807 4722961 D COG0845 Membrane-fusion protein; RND family efflux transporter, MFP subunit 4721807..4722961 Pseudomonas putida HB3267 14290671 YP_007231124.1 CDS B479_21460 NC_019905.1 4722965 4726117 D COG0841 Cation/multidrug efflux pump; hydrophobe/amphiphile efflux-1 (HAE1) family protein 4722965..4726117 Pseudomonas putida HB3267 14290672 YP_007231125.1 CDS B479_21465 NC_019905.1 4726114 4727571 D COG1538 Outer membrane protein; RND efflux system outer membrane lipoprotein 4726114..4727571 Pseudomonas putida HB3267 14290673 YP_007231126.1 CDS B479_21470 NC_019905.1 4727871 4729127 D outer membrane porin 4727871..4729127 Pseudomonas putida HB3267 14290674 YP_007231127.1 CDS B479_21475 NC_019905.1 4729311 4730234 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 4729311..4730234 Pseudomonas putida HB3267 14290675 YP_007231128.1 CDS B479_21480 NC_019905.1 4730427 4730951 D COG4539 Predicted membrane protein; PRS2-like protein 4730427..4730951 Pseudomonas putida HB3267 14290676 YP_007231129.1 CDS B479_21485 NC_019905.1 4731065 4731460 R COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit; 4-carboxymuconolactone decarboxylase complement(4731065..4731460) Pseudomonas putida HB3267 14290677 YP_007231130.1 CDS B479_21490 NC_019905.1 4731471 4732262 R COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); 3-oxoadipate enol-lactonase complement(4731471..4732262) Pseudomonas putida HB3267 14290678 YP_007231131.1 CDS B479_21495 NC_019905.1 4732274 4733626 R COG0015 Adenylosuccinate lyase; 3-carboxy-cis,cis-muconate cycloisomerase complement(4732274..4733626) Pseudomonas putida HB3267 14290679 YP_007231132.1 CDS B479_21500 NC_019905.1 4733636 4734925 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily metabolite/H(+) symporter complement(4733636..4734925) Pseudomonas putida HB3267 14290680 YP_007231133.1 CDS B479_21505 NC_019905.1 4735115 4736317 R COG0183 Acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase complement(4735115..4736317) Pseudomonas putida HB3267 14290681 YP_007231134.1 CDS B479_21510 NC_019905.1 4736317 4737096 R COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; 3-oxoadipate:succinyl-CoA transferase subunit B complement(4736317..4737096) Pseudomonas putida HB3267 14290682 YP_007231135.1 CDS B479_21515 NC_019905.1 4737093 4737953 R COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; 3-oxoadipate:succinyl-CoA transferase subunit A complement(4737093..4737953) Pseudomonas putida HB3267 14290683 YP_007231136.1 CDS B479_21520 NC_019905.1 4738184 4739530 R COG0477 Permeases of the major facilitator superfamily; benzoate transporter complement(4738184..4739530) Pseudomonas putida HB3267 14290684 YP_007231137.1 CDS B479_21525 NC_019905.1 4739859 4740749 R COG1414 Transcriptional regulator; pca regulon regulatory protein complement(4739859..4740749) Pseudomonas putida HB3267 14290685 YP_007231138.1 CDS B479_21530 NC_019905.1 4741239 4741439 D hypothetical protein 4741239..4741439 Pseudomonas putida HB3267 14290686 YP_007231139.1 CDS B479_21535 NC_019905.1 4741751 4743223 D COG0306 Phosphate/sulphate permeases; phosphate transporter 4741751..4743223 Pseudomonas putida HB3267 14290687 YP_007231140.1 CDS B479_21540 NC_019905.1 4743448 4744923 R COG0433 Predicted ATPase; hypothetical protein complement(4743448..4744923) Pseudomonas putida HB3267 14290688 YP_007231141.1 CDS B479_21545 NC_019905.1 4745093 4746967 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer with Cache sensor 4745093..4746967 Pseudomonas putida HB3267 14290689 YP_007231142.1 CDS B479_21550 NC_019905.1 4747219 4748340 D COG0438 Glycosyltransferase; group 1 glycosyl transferase 4747219..4748340 Pseudomonas putida HB3267 14290690 YP_007231143.1 CDS B479_21555 NC_019905.1 4748333 4749097 D COG3233 Predicted deacetylase; hypothetical protein 4748333..4749097 Pseudomonas putida HB3267 14290691 YP_007231144.1 CDS B479_21560 NC_019905.1 4749094 4750086 D COG0392 Predicted integral membrane protein; hypothetical protein 4749094..4750086 Pseudomonas putida HB3267 14290692 YP_007231145.1 CDS purU NC_019905.1 4750373 4751224 R COG0788 Formyltetrahydrofolate hydrolase; formyltetrahydrofolate deformylase complement(4750373..4751224) Pseudomonas putida HB3267 14290693 YP_007231146.1 CDS B479_21570 NC_019905.1 4751509 4751886 D transcriptional regulator, MvaT P16 subunit 4751509..4751886 Pseudomonas putida HB3267 14290694 YP_007231147.1 CDS sbcB NC_019905.1 4751972 4753405 R COG2925 Exonuclease I; exonuclease I complement(4751972..4753405) Pseudomonas putida HB3267 14290695 YP_007231148.1 CDS B479_21580 NC_019905.1 4753477 4753836 R type IV pilus assembly PilZ complement(4753477..4753836) Pseudomonas putida HB3267 14290696 YP_007231149.1 CDS B479_21585 NC_019905.1 4753960 4754346 R COG1729 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4753960..4754346) Pseudomonas putida HB3267 14290697 YP_007231150.1 CDS B479_21590 NC_019905.1 4754526 4755980 D COG0469 Pyruvate kinase; pyruvate kinase 4754526..4755980 Pseudomonas putida HB3267 14290698 YP_007231151.1 CDS B479_21595 NC_019905.1 4756120 4757040 R COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; hypothetical protein complement(4756120..4757040) Pseudomonas putida HB3267 14290699 YP_007231152.1 CDS B479_21600 NC_019905.1 4757289 4758812 D COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; fumarate hydratase 4757289..4758812 Pseudomonas putida HB3267 14290700 YP_007231153.1 CDS B479_21605 NC_019905.1 4758843 4759721 R COG0388 Predicted amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(4758843..4759721) Pseudomonas putida HB3267 14290701 YP_007231154.1 CDS B479_21610 NC_019905.1 4759718 4760308 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; hypothetical protein complement(4759718..4760308) Pseudomonas putida HB3267 14290702 YP_007231155.1 CDS B479_21615 NC_019905.1 4760424 4760822 D hypothetical protein 4760424..4760822 Pseudomonas putida HB3267 14290703 YP_007231156.1 CDS B479_21620 NC_019905.1 4760947 4761525 R COG0693 Putative intracellular protease/amidase; PfpI family intracellular peptidase complement(4760947..4761525) Pseudomonas putida HB3267 14290704 YP_007231157.1 CDS B479_21625 NC_019905.1 4761577 4762734 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phospholipase family protein complement(4761577..4762734) Pseudomonas putida HB3267 14290705 YP_007231158.1 CDS B479_21630 NC_019905.1 4762736 4763317 R hypothetical protein complement(4762736..4763317) Pseudomonas putida HB3267 14290706 YP_007231159.1 CDS B479_21635 NC_019905.1 4763362 4763658 R hypothetical protein complement(4763362..4763658) Pseudomonas putida HB3267 14290707 YP_007231160.1 CDS B479_21640 NC_019905.1 4763655 4764734 R COG1680 Beta-lactamase class C and other penicillin binding proteins; beta-lactamase complement(4763655..4764734) Pseudomonas putida HB3267 14290708 YP_007231161.1 CDS B479_21645 NC_019905.1 4764907 4765794 R COG1960 Acyl-CoA dehydrogenases; hypothetical protein complement(4764907..4765794) Pseudomonas putida HB3267 14290709 YP_007231162.1 CDS B479_21650 NC_019905.1 4765955 4766710 D COG3176 Putative hemolysin; hypothetical protein 4765955..4766710 Pseudomonas putida HB3267 14290710 YP_007231163.1 CDS B479_21655 NC_019905.1 4766710 4767498 D COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; phospholipid/glycerol acyltransferase 4766710..4767498 Pseudomonas putida HB3267 14290711 YP_007231164.1 CDS B479_21660 NC_019905.1 4767560 4768144 R COG3124 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4767560..4768144) Pseudomonas putida HB3267 14290712 YP_007231165.1 CDS B479_21665 NC_019905.1 4768295 4768597 D COG0640 Predicted transcriptional regulators; ArsR family transcriptional regulator 4768295..4768597 Pseudomonas putida HB3267 14290713 YP_007231166.1 CDS B479_21670 NC_019905.1 4768615 4769664 D COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; NADH:flavin oxidoreductase 4768615..4769664 Pseudomonas putida HB3267 14290714 YP_007231167.1 CDS B479_21675 NC_019905.1 4769788 4770657 R hypothetical protein complement(4769788..4770657) Pseudomonas putida HB3267 14290715 YP_007231168.1 CDS B479_21680 NC_019905.1 4770745 4771740 R COG0451 Nucleoside-diphosphate-sugar epimerases; NAD-dependent epimerase/dehydratase complement(4770745..4771740) Pseudomonas putida HB3267 14290716 YP_007231169.1 CDS B479_21685 NC_019905.1 4771790 4772680 R COG0583 Transcriptional regulator; chromosome replication initiation inhibitor protein complement(4771790..4772680) Pseudomonas putida HB3267 14290717 YP_007231170.1 CDS B479_21690 NC_019905.1 4772778 4773377 D COG1279 Lysine efflux permease; lysine exporter protein LysE/YggA 4772778..4773377 Pseudomonas putida HB3267 14290718 YP_007231171.1 CDS B479_21695 NC_019905.1 4773661 4774257 D COG0605 Superoxide dismutase; superoxide dismutase 4773661..4774257 Pseudomonas putida HB3267 14290719 YP_007231172.1 CDS B479_21700 NC_019905.1 4774375 4775124 R COG3622 Hydroxypyruvate isomerase; hydroxypyruvate isomerase complement(4774375..4775124) Pseudomonas putida HB3267 14290720 YP_007231173.1 CDS B479_21705 NC_019905.1 4775217 4776119 D COG1802 Transcriptional regulators; GntR family transcriptional regulator 4775217..4776119 Pseudomonas putida HB3267 14290721 YP_007231174.1 CDS B479_21710 NC_019905.1 4776332 4778788 D COG4993 Glucose dehydrogenase; glucose dehydrogenase 4776332..4778788 Pseudomonas putida HB3267 14290722 YP_007231175.1 CDS B479_21715 NC_019905.1 4779087 4779716 D hypothetical protein 4779087..4779716 Pseudomonas putida HB3267 14290723 YP_007231176.1 CDS B479_21720 NC_019905.1 4779746 4780714 D COG2175 Probable taurine catabolism dioxygenase; hypothetical protein 4779746..4780714 Pseudomonas putida HB3267 14290724 YP_007231177.1 CDS B479_21725 NC_019905.1 4781140 4783194 D COG2199 FOG: GGDEF domain; diguanylate cyclase/phosphodiesterase 4781140..4783194 Pseudomonas putida HB3267 14290725 YP_007231178.1 CDS B479_21730 NC_019905.1 4783351 4784688 D COG3487 Uncharacterized iron-regulated protein; hypothetical protein 4783351..4784688 Pseudomonas putida HB3267 14290726 YP_007231179.1 CDS B479_21735 NC_019905.1 4784966 4786393 D COG3488 Predicted thiol oxidoreductase; hypothetical protein 4784966..4786393 Pseudomonas putida HB3267 14290727 YP_007231180.1 CDS B479_21740 NC_019905.1 4786414 4787478 D COG3489 Predicted periplasmic lipoprotein; lipoprotein 4786414..4787478 Pseudomonas putida HB3267 14290728 YP_007231181.1 CDS B479_21745 NC_019905.1 4787481 4788578 D COG3490 Uncharacterized protein conserved in bacteria; hypothetical protein 4787481..4788578 Pseudomonas putida HB3267 14290729 YP_007231182.1 CDS B479_21750 NC_019905.1 4788812 4789960 D COG0845 Membrane-fusion protein; RND family efflux transporter, MFP subunit 4788812..4789960 Pseudomonas putida HB3267 14290730 YP_007231183.1 CDS B479_21755 NC_019905.1 4789973 4793017 D COG0841 Cation/multidrug efflux pump; multidrug efflux protein 4789973..4793017 Pseudomonas putida HB3267 14290731 YP_007231184.1 CDS B479_21760 NC_019905.1 4793125 4793334 R hypothetical protein complement(4793125..4793334) Pseudomonas putida HB3267 14290732 YP_007231185.1 CDS B479_21765 NC_019905.1 4793355 4794056 R lipopolysaccharide kinase complement(4793355..4794056) Pseudomonas putida HB3267 14290733 YP_007231186.1 CDS B479_21770 NC_019905.1 4794063 4794746 R COG0500 SAM-dependent methyltransferases; type 11 methyltransferase complement(4794063..4794746) Pseudomonas putida HB3267 14290734 YP_007231187.1 CDS B479_21775 NC_019905.1 4794854 4796164 R COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(4794854..4796164) Pseudomonas putida HB3267 14290735 YP_007231188.1 CDS B479_21780 NC_019905.1 4796154 4796837 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; ColR complement(4796154..4796837) Pseudomonas putida HB3267 14290736 YP_007231189.1 CDS B479_21785 NC_019905.1 4797021 4797749 D COG3907 PAP2 (acid phosphatase) superfamily protein; PAP2 family protein 4797021..4797749 Pseudomonas putida HB3267 14290737 YP_007231190.1 CDS groEL NC_019905.1 4797951 4799591 R COG0459 Chaperonin GroEL (HSP60 family); chaperonin GroEL complement(4797951..4799591) Pseudomonas putida HB3267 14290738 YP_007231191.1 CDS groES NC_019905.1 4799640 4799933 R COG0234 Co-chaperonin GroES (HSP10); co-chaperonin GroES complement(4799640..4799933) Pseudomonas putida HB3267 14290739 YP_007231192.1 CDS fxsA NC_019905.1 4800181 4800642 R COG3030 Protein affecting phage T7 exclusion by the F plasmid; phage T7 F exclusion suppressor FxsA complement(4800181..4800642) Pseudomonas putida HB3267 14290740 YP_007231193.1 CDS B479_21805 NC_019905.1 4800710 4801441 R COG0748 Putative heme iron utilization protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(4800710..4801441) Pseudomonas putida HB3267 14290741 YP_007231194.1 CDS B479_21810 NC_019905.1 4801591 4802547 R hypothetical protein complement(4801591..4802547) Pseudomonas putida HB3267 14290742 YP_007231195.1 CDS B479_21815 NC_019905.1 4802768 4803121 D COG3695 Predicted methylated DNA-protein cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 4802768..4803121 Pseudomonas putida HB3267 14290743 YP_007231196.1 CDS B479_21820 NC_019905.1 4803165 4804712 D COG0477 Permeases of the major facilitator superfamily; AmpG-related permease 4803165..4804712 Pseudomonas putida HB3267 14290744 YP_007231197.1 CDS B479_21825 NC_019905.1 4804828 4806072 R COG0477 Permeases of the major facilitator superfamily; multidrug efflux system translocase MdfA complement(4804828..4806072) Pseudomonas putida HB3267 14290745 YP_007231198.1 CDS B479_21830 NC_019905.1 4806284 4807126 R COG0668 Small-conductance mechanosensitive channel; mechanosensitive ion channel protein MscS complement(4806284..4807126) Pseudomonas putida HB3267 14290746 YP_007231199.1 CDS B479_21835 NC_019905.1 4807241 4807726 R COG1666 Uncharacterized protein conserved in bacteria; nucleotide-binding protein complement(4807241..4807726) Pseudomonas putida HB3267 14290747 YP_007231200.1 CDS B479_21840 NC_019905.1 4807827 4808744 D COG1893 Ketopantoate reductase; 2-dehydropantoate 2-reductase 4807827..4808744 Pseudomonas putida HB3267 14290748 YP_007231201.1 CDS B479_21845 NC_019905.1 4808783 4810813 D COG0642 Signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 4808783..4810813 Pseudomonas putida HB3267 14290749 YP_007231202.1 CDS B479_21850 NC_019905.1 4810815 4811381 D COG2096 Uncharacterized conserved protein; ATP-cobalamin adenosyltransferase 4810815..4811381 Pseudomonas putida HB3267 14290750 YP_007231203.1 CDS B479_21855 NC_019905.1 4811525 4812469 R COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; hypothetical protein complement(4811525..4812469) Pseudomonas putida HB3267 14290751 YP_007231204.1 CDS B479_21860 NC_019905.1 4812466 4813098 R COG0625 Glutathione S-transferase; glutathione S-transferase domain-containing protein complement(4812466..4813098) Pseudomonas putida HB3267 14290752 YP_007231205.1 CDS argJ NC_019905.1 4813243 4814460 R COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein complement(4813243..4814460) Pseudomonas putida HB3267 14290753 YP_007231206.1 CDS secA NC_019905.1 4814657 4817392 R COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); preprotein translocase subunit SecA complement(4814657..4817392) Pseudomonas putida HB3267 14290754 YP_007231207.1 CDS B479_21875 NC_019905.1 4817785 4818240 D COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives; hypothetical protein 4817785..4818240 Pseudomonas putida HB3267 14290755 YP_007231208.1 CDS lpxC NC_019905.1 4818288 4819199 R COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(4818288..4819199) Pseudomonas putida HB3267 14290756 YP_007231209.1 CDS B479_21885 NC_019905.1 4819312 4820508 R COG0206 Cell division GTPase; cell division protein FtsZ complement(4819312..4820508) Pseudomonas putida HB3267 14290757 YP_007231210.1 CDS B479_21890 NC_019905.1 4820564 4821820 R COG0849 Actin-like ATPase involved in cell division; cell division protein FtsA complement(4820564..4821820) Pseudomonas putida HB3267 14290758 YP_007231211.1 CDS B479_21895 NC_019905.1 4821835 4822704 R COG1589 Cell division septal protein; cell division protein FtsQ complement(4821835..4822704) Pseudomonas putida HB3267 14290759 YP_007231212.1 CDS ddl NC_019905.1 4822709 4823665 R COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; D-alanine--D-alanine ligase complement(4822709..4823665) Pseudomonas putida HB3267 14290760 YP_007231213.1 CDS murC NC_019905.1 4823662 4825110 R COG0773 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase complement(4823662..4825110) Pseudomonas putida HB3267 14290761 YP_007231214.1 CDS murG NC_019905.1 4825103 4826182 R COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(4825103..4826182) Pseudomonas putida HB3267 14290762 YP_007231215.1 CDS B479_21915 NC_019905.1 4826172 4827386 R COG0772 Bacterial cell division membrane protein; cell division protein FtsW complement(4826172..4827386) Pseudomonas putida HB3267 14290763 YP_007231216.1 CDS murD NC_019905.1 4827383 4828729 R COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(4827383..4828729) Pseudomonas putida HB3267 14290764 YP_007231217.1 CDS mraY NC_019905.1 4828736 4829818 R COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(4828736..4829818) Pseudomonas putida HB3267 14290765 YP_007231218.1 CDS B479_21930 NC_019905.1 4829818 4831185 R COG0770 UDP-N-acetylmuramyl pentapeptide synthase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase complement(4829818..4831185) Pseudomonas putida HB3267 14290766 YP_007231219.1 CDS murE NC_019905.1 4831178 4832665 R COG0769 UDP-N-acetylmuramyl tripeptide synthase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(4831178..4832665) Pseudomonas putida HB3267 14290767 YP_007231220.1 CDS B479_21940 NC_019905.1 4832665 4834410 R COG0768 Cell division protein FtsI/penicillin-binding protein 2; peptidoglycan glycosyltransferase complement(4832665..4834410) Pseudomonas putida HB3267 14290768 YP_007231221.1 CDS B479_21945 NC_019905.1 4834407 4834700 R COG3116 Cell division protein; cell division protein FtsL complement(4834407..4834700) Pseudomonas putida HB3267 14290769 YP_007231222.1 CDS B479_21950 NC_019905.1 4834697 4835644 R COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; 16S rRNA m(4)C1402 methyltransferase complement(4834697..4835644) Pseudomonas putida HB3267 14290770 YP_007231223.1 CDS B479_21955 NC_019905.1 4835641 4836096 R COG2001 Uncharacterized protein conserved in bacteria; cell division protein MraZ complement(4835641..4836096) Pseudomonas putida HB3267 14290771 YP_007231224.1 CDS B479_21960 NC_019905.1 4836832 4837659 R COG0313 Predicted methyltransferases; uroporphyrin-III C/tetrapyrrole methyltransferase complement(4836832..4837659) Pseudomonas putida HB3267 14290772 YP_007231225.1 CDS B479_21965 NC_019905.1 4837894 4839711 D COG3107 Putative lipoprotein; LppC family lipoprotein 4837894..4839711 Pseudomonas putida HB3267 14290773 YP_007231226.1 CDS B479_21970 NC_019905.1 4839711 4840082 D COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; hypothetical protein 4839711..4840082 Pseudomonas putida HB3267 14290774 YP_007231227.1 CDS B479_21975 NC_019905.1 4840175 4840762 D COG0279 Phosphoheptose isomerase; phosphoheptose isomerase 4840175..4840762 Pseudomonas putida HB3267 14290775 YP_007231228.1 CDS B479_21980 NC_019905.1 4840759 4841337 D COG2823 Predicted periplasmic or secreted lipoprotein; transport-associated protein 4840759..4841337 Pseudomonas putida HB3267 14290776 YP_007231229.1 CDS B479_21985 NC_019905.1 4841501 4841719 D hypothetical protein 4841501..4841719 Pseudomonas putida HB3267 14290777 YP_007231230.1 CDS B479_21990 NC_019905.1 4841771 4842202 R COG2969 Stringent starvation protein B; ClpXP protease specificity-enhancing factor complement(4841771..4842202) Pseudomonas putida HB3267 14290778 YP_007231231.1 CDS B479_21995 NC_019905.1 4842213 4842836 R COG0625 Glutathione S-transferase; glutathione S-transferase domain-containing protein complement(4842213..4842836) Pseudomonas putida HB3267 14290779 YP_007231232.1 CDS B479_22000 NC_019905.1 4842954 4843733 R COG2857 Cytochrome c1; ubiquinol-cytochrome c reductase, cytochrome c1 complement(4842954..4843733) Pseudomonas putida HB3267 14290780 YP_007231233.1 CDS B479_22005 NC_019905.1 4843733 4844944 R COG1290 Cytochrome b subunit of the bc complex; cytochrome b/b6 domain-containing protein complement(4843733..4844944) Pseudomonas putida HB3267 14290781 YP_007231234.1 CDS B479_22010 NC_019905.1 4844944 4845537 R COG0723 Rieske Fe-S protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit complement(4844944..4845537) Pseudomonas putida HB3267 14290782 YP_007231235.1 CDS rpsI NC_019905.1 4845800 4846192 R COG0103 Ribosomal protein S9; 30S ribosomal protein S9 complement(4845800..4846192) Pseudomonas putida HB3267 14290783 YP_007231236.1 CDS rplM NC_019905.1 4846207 4846635 R COG0102 Ribosomal protein L13; 50S ribosomal protein L13 complement(4846207..4846635) Pseudomonas putida HB3267 14290784 YP_007231237.1 CDS B479_22025 NC_019905.1 4846893 4847933 D COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); aldo/keto reductase 4846893..4847933 Pseudomonas putida HB3267 14290785 YP_007231238.1 CDS B479_22030 NC_019905.1 4848169 4849164 D COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; AraC family transcriptional regulator 4848169..4849164 Pseudomonas putida HB3267 14290786 YP_007231239.1 CDS B479_22035 NC_019905.1 4849284 4850378 R COG1485 Predicted ATPase; AFG1 family ATPase complement(4849284..4850378) Pseudomonas putida HB3267 14290787 YP_007231240.1 CDS B479_22040 NC_019905.1 4850545 4851894 R COG0180 Tryptophanyl-tRNA synthetase; tryptophanyl-tRNA ligase complement(4850545..4851894) Pseudomonas putida HB3267 14290788 YP_007231241.1 CDS B479_22045 NC_019905.1 4851920 4852555 R COG2945 Predicted hydrolase of the alpha/beta superfamily; hypothetical protein complement(4851920..4852555) Pseudomonas putida HB3267 14290789 YP_007231242.1 CDS B479_22050 NC_019905.1 4852691 4853125 D COG3105 Uncharacterized protein conserved in bacteria; hypothetical protein 4852691..4853125 Pseudomonas putida HB3267 14290790 YP_007231243.1 CDS B479_22055 NC_019905.1 4853288 4854484 R COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; methionine gamma-lyase complement(4853288..4854484) Pseudomonas putida HB3267 14290791 YP_007231244.1 CDS B479_22060 NC_019905.1 4854612 4855091 D COG1522 Transcriptional regulators; AsnC family transcriptional regulator 4854612..4855091 Pseudomonas putida HB3267 14290792 YP_007231245.1 CDS B479_22065 NC_019905.1 4855204 4857462 D pyocin S-type Killer domain-containing protein 4855204..4857462 Pseudomonas putida HB3267 14290793 YP_007231246.1 CDS B479_22070 NC_019905.1 4857459 4857722 D colicin immunity protein/pyocin immunity protein 4857459..4857722 Pseudomonas putida HB3267 14290794 YP_007231247.1 CDS B479_22075 NC_019905.1 4857935 4859836 R COG2895 GTPases - Sulfate adenylate transferase subunit 1; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein complement(4857935..4859836) Pseudomonas putida HB3267 14290795 YP_007231248.1 CDS B479_22080 NC_019905.1 4859853 4860770 R COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes; sulfate adenylyltransferase subunit 2 complement(4859853..4860770) Pseudomonas putida HB3267 14290796 YP_007231249.1 CDS B479_22085 NC_019905.1 4861084 4861842 R COG0327 Uncharacterized conserved protein; hypothetical protein complement(4861084..4861842) Pseudomonas putida HB3267 14290797 YP_007231250.1 CDS B479_22090 NC_019905.1 4862010 4863170 D COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; 2-alkenal reductase 4862010..4863170 Pseudomonas putida HB3267 14290798 YP_007231251.1 CDS B479_22095 NC_019905.1 4863292 4864056 R COG1126 ABC-type polar amino acid transport system, ATPase component; amino acid ABC transporter ATP-binding protein complement(4863292..4864056) Pseudomonas putida HB3267 14290799 YP_007231252.1 CDS B479_22100 NC_019905.1 4864067 4865164 R COG0765 ABC-type amino acid transport system, permease component; polar amino acid ABC transporter inner membrane subunit complement(4864067..4865164) Pseudomonas putida HB3267 14290800 YP_007231253.1 CDS B479_22105 NC_019905.1 4865175 4866353 R COG4597 ABC-type amino acid transport system, permease component; amino acid ABC transporter permease complement(4865175..4866353) Pseudomonas putida HB3267 14290801 YP_007231254.1 CDS B479_22110 NC_019905.1 4866421 4867449 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter substrate-binding protein complement(4866421..4867449) Pseudomonas putida HB3267 14290802 YP_007231255.1 CDS B479_22115 NC_019905.1 4867781 4868437 D COG0400 Predicted esterase; carboxylesterase 4867781..4868437 Pseudomonas putida HB3267 14290803 YP_007231256.1 CDS B479_22120 NC_019905.1 4868539 4870809 D COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase RhlB 4868539..4870809 Pseudomonas putida HB3267 14290804 YP_007231257.1 CDS B479_22125 NC_019905.1 4870593 4870838 R COG1977 Molybdopterin converting factor, small subunit; molybdopterin converting factor subunit 1 complement(4870593..4870838) Pseudomonas putida HB3267 14290805 YP_007231258.1 CDS moaC NC_019905.1 4870838 4871308 R COG0315 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein MoaC complement(4870838..4871308) Pseudomonas putida HB3267 14290806 YP_007231259.1 CDS B479_22135 NC_019905.1 4871425 4872819 R COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH; PhoH family protein complement(4871425..4872819) Pseudomonas putida HB3267 14290807 YP_007231260.1 CDS B479_22140 NC_019905.1 4873281 4874408 R COG0726 Predicted xylanase/chitin deacetylase; polysaccharide deacetylase complement(4873281..4874408) Pseudomonas putida HB3267 14290808 YP_007231261.1 CDS B479_22145 NC_019905.1 4874545 4875324 D COG3022 Uncharacterized protein conserved in bacteria; hypothetical protein 4874545..4875324 Pseudomonas putida HB3267 14290809 YP_007231262.1 CDS B479_22150 NC_019905.1 4876229 4877545 D COG1004 Predicted UDP-glucose 6-dehydrogenase; GDP-mannose 6-dehydrogenase 4876229..4877545 Pseudomonas putida HB3267 14290810 YP_007231263.1 CDS B479_22155 NC_019905.1 4877610 4879100 D COG1215 Glycosyltransferases, probably involved in cell wall biogenesis; glycosyl transferase Alg8 4877610..4879100 Pseudomonas putida HB3267 14290811 YP_007231264.1 CDS B479_22160 NC_019905.1 4879137 4880303 D COG0845 Membrane-fusion protein; type IV pilus assembly PilZ 4879137..4880303 Pseudomonas putida HB3267 14290812 YP_007231265.1 CDS B479_22165 NC_019905.1 4880442 4881848 D COG0790 FOG: TPR repeat, SEL1 subfamily; Sel1 domain-containing protein 4880442..4881848 Pseudomonas putida HB3267 14290813 YP_007231266.1 CDS B479_22170 NC_019905.1 4881845 4883323 D outer membrane protein AlgE 4881845..4883323 Pseudomonas putida HB3267 14290814 YP_007231267.1 CDS B479_22175 NC_019905.1 4883339 4884898 D carbohydrate-binding and sugar hydrolysis protein 4883339..4884898 Pseudomonas putida HB3267 14290815 YP_007231268.1 CDS B479_22180 NC_019905.1 4884912 4886354 D alginate biosynthesis protein AlgX 4884912..4886354 Pseudomonas putida HB3267 14290816 YP_007231269.1 CDS algL NC_019905.1 4886362 4887465 D poly(beta-D-mannuronate) lyase 4886362..4887465 Pseudomonas putida HB3267 14290817 YP_007231270.1 CDS B479_22190 NC_019905.1 4887663 4889120 D COG1696 Predicted membrane protein involved in D-alanine export; alginate o-acetyltransferase AlgI 4887663..4889120 Pseudomonas putida HB3267 14290818 YP_007231271.1 CDS B479_22195 NC_019905.1 4889131 4890288 D protein AlgJ 4889131..4890288 Pseudomonas putida HB3267 14290819 YP_007231272.1 CDS B479_22200 NC_019905.1 4890305 4890952 D alginate O-acetyltransferase 4890305..4890952 Pseudomonas putida HB3267 14290820 YP_007231273.1 CDS B479_22205 NC_019905.1 4890988 4892442 D COG0836 Mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4890988..4892442 Pseudomonas putida HB3267 14290821 YP_007231274.1 CDS B479_22210 NC_019905.1 4892540 4893004 D hypothetical protein 4892540..4893004 Pseudomonas putida HB3267 14290822 YP_007231275.1 CDS B479_22215 NC_019905.1 4893156 4893968 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short chain dehydrogenase 4893156..4893968 Pseudomonas putida HB3267 14290823 YP_007231276.1 CDS B479_22220 NC_019905.1 4894037 4894831 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain dehydrogenase/reductase family protein complement(4894037..4894831) Pseudomonas putida HB3267 14290824 YP_007231277.1 CDS B479_22225 NC_019905.1 4894968 4896419 R COG1538 Outer membrane protein; RND efflux system outer membrane lipoprotein complement(4894968..4896419) Pseudomonas putida HB3267 14290825 YP_007231278.1 CDS B479_22230 NC_019905.1 4896416 4897477 R COG1566 Multidrug resistance efflux pump; secretion protein HlyD family protein complement(4896416..4897477) Pseudomonas putida HB3267 14290826 YP_007231279.1 CDS B479_22235 NC_019905.1 4897506 4899047 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(4897506..4899047) Pseudomonas putida HB3267 14290827 YP_007231280.1 CDS B479_22240 NC_019905.1 4899275 4900183 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(4899275..4900183) Pseudomonas putida HB3267 14290828 YP_007231281.1 CDS B479_22245 NC_019905.1 4900456 4900905 D COG0589 Universal stress protein UspA and related nucleotide-binding proteins; UspA domain-containing protein 4900456..4900905 Pseudomonas putida HB3267 14290829 YP_007231282.1 CDS B479_22250 NC_019905.1 4901011 4901871 R COG1566 Multidrug resistance efflux pump; secretion protein HlyD family protein complement(4901011..4901871) Pseudomonas putida HB3267 14290830 YP_007231283.1 CDS B479_22255 NC_019905.1 4901882 4902082 R hypothetical protein complement(4901882..4902082) Pseudomonas putida HB3267 14290831 YP_007231284.1 CDS B479_22260 NC_019905.1 4902087 4904264 R COG1289 Predicted membrane protein; fusaric acid resistance protein region complement(4902087..4904264) Pseudomonas putida HB3267 14290832 YP_007231285.1 CDS B479_22265 NC_019905.1 4904261 4905790 R COG1538 Outer membrane protein; RND efflux system outer membrane lipoprotein complement(4904261..4905790) Pseudomonas putida HB3267 14290833 YP_007231286.1 CDS B479_22270 NC_019905.1 4905982 4906929 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 4905982..4906929 Pseudomonas putida HB3267 14290834 YP_007231287.1 CDS B479_22275 NC_019905.1 4907146 4908120 D COG1052 Lactate dehydrogenase and related dehydrogenases; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 4907146..4908120 Pseudomonas putida HB3267 14290835 YP_007231288.1 CDS B479_22280 NC_019905.1 4908323 4908868 D hypothetical protein 4908323..4908868 Pseudomonas putida HB3267 14290836 YP_007231289.1 CDS B479_22285 NC_019905.1 4908995 4909897 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein complement(4908995..4909897) Pseudomonas putida HB3267 14290837 YP_007231290.1 CDS B479_22290 NC_019905.1 4910171 4911046 D COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator 4910171..4911046 Pseudomonas putida HB3267 14290838 YP_007231291.1 CDS B479_22295 NC_019905.1 4911137 4913527 R COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent siderophore receptor complement(4911137..4913527) Pseudomonas putida HB3267 14290839 YP_007231292.1 CDS B479_22300 NC_019905.1 4913665 4914648 R COG3712 Fe2+-dicitrate sensor, membrane component; anti-FecI sigma factor FecR complement(4913665..4914648) Pseudomonas putida HB3267 14290840 YP_007231293.1 CDS B479_22305 NC_019905.1 4914645 4915202 R COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; ECF subfamily RNA polymerase sigma-24 factor complement(4914645..4915202) Pseudomonas putida HB3267 14290841 YP_007231294.1 CDS B479_22310 NC_019905.1 4915225 4915551 R hypothetical protein complement(4915225..4915551) Pseudomonas putida HB3267 14290842 YP_007231295.1 CDS B479_22315 NC_019905.1 4915551 4917128 R COG3182 Uncharacterized iron-regulated membrane protein; PepSY-associated TM helix domain-containing protein complement(4915551..4917128) Pseudomonas putida HB3267 14290843 YP_007231296.1 CDS B479_22320 NC_019905.1 4917125 4917430 R COG2733 Predicted membrane protein; hypothetical protein complement(4917125..4917430) Pseudomonas putida HB3267 14290844 YP_007231297.1 CDS B479_22325 NC_019905.1 4917664 4918011 D hypothetical protein 4917664..4918011 Pseudomonas putida HB3267 14290845 YP_007231298.1 CDS B479_22330 NC_019905.1 4918133 4918423 D hypothetical protein 4918133..4918423 Pseudomonas putida HB3267 14290846 YP_007231299.1 CDS B479_22335 NC_019905.1 4918427 4918897 R COG3223 Predicted membrane protein; phosphate-starvation-inducible E complement(4918427..4918897) Pseudomonas putida HB3267 14290847 YP_007231300.1 CDS B479_22340 NC_019905.1 4919498 4919761 D COG3141 Uncharacterized protein conserved in bacteria; hypothetical protein 4919498..4919761 Pseudomonas putida HB3267 14290848 YP_007231301.1 CDS B479_22345 NC_019905.1 4920000 4921019 R COG0334 Glutamate dehydrogenase/leucine dehydrogenase; leucine dehydrogenase complement(4920000..4921019) Pseudomonas putida HB3267 14290849 YP_007231302.1 CDS B479_22350 NC_019905.1 4921144 4921950 D COG2912 Uncharacterized conserved protein; hypothetical protein 4921144..4921950 Pseudomonas putida HB3267 14290850 YP_007231303.1 CDS B479_22355 NC_019905.1 4921944 4922576 R COG0625 Glutathione S-transferase; maleylacetoacetate isomerase complement(4921944..4922576) Pseudomonas putida HB3267 14290851 YP_007231304.1 CDS B479_22360 NC_019905.1 4922589 4923881 R COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway); fumarylacetoacetase complement(4922589..4923881) Pseudomonas putida HB3267 14290852 YP_007231305.1 CDS B479_22365 NC_019905.1 4923885 4925186 R COG3508 Homogentisate 1,2-dioxygenase; homogentisate 1,2-dioxygenase complement(4923885..4925186) Pseudomonas putida HB3267 14290853 YP_007231306.1 CDS B479_22370 NC_019905.1 4925361 4926143 D COG1414 Transcriptional regulator; IclR family transcriptional regulator 4925361..4926143 Pseudomonas putida HB3267 14290854 YP_007231307.1 CDS B479_22375 NC_019905.1 4926497 4927411 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain dehydrogenase/reductase SDR complement(4926497..4927411) Pseudomonas putida HB3267 14290855 YP_007231308.1 CDS B479_22380 NC_019905.1 4927632 4928423 R COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold protein complement(4927632..4928423) Pseudomonas putida HB3267 14290856 YP_007231309.1 CDS B479_22385 NC_019905.1 4928714 4929400 R COG1346 Putative effector of murein hydrolase; LrgB family protein complement(4928714..4929400) Pseudomonas putida HB3267 14290857 YP_007231310.1 CDS B479_22390 NC_019905.1 4929390 4929776 R COG1380 Putative effector of murein hydrolase LrgA; LrgA family protein complement(4929390..4929776) Pseudomonas putida HB3267 14290858 YP_007231311.1 CDS B479_22395 NC_019905.1 4929873 4930754 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 4929873..4930754 Pseudomonas putida HB3267 14290859 YP_007231312.1 CDS B479_22400 NC_019905.1 4930902 4931357 R COG0716 Flavodoxins; flavodoxin complement(4930902..4931357) Pseudomonas putida HB3267 14290860 YP_007231313.1 CDS B479_22405 NC_019905.1 4931486 4931914 D COG2202 FOG: PAS/PAC domain; putative PAS/PAC sensor protein 4931486..4931914 Pseudomonas putida HB3267 14290861 YP_007231314.1 CDS B479_22410 NC_019905.1 4931971 4932588 D hypothetical protein 4931971..4932588 Pseudomonas putida HB3267 14290862 YP_007231315.1 CDS B479_22415 NC_019905.1 4932573 4933505 R COG0789 Predicted transcriptional regulators; MerR family transcriptional regulator complement(4932573..4933505) Pseudomonas putida HB3267 14290863 YP_007231316.1 CDS B479_22420 NC_019905.1 4933725 4934285 D COG3224 Uncharacterized protein conserved in bacteria; hypothetical protein 4933725..4934285 Pseudomonas putida HB3267 14290864 YP_007231317.1 CDS B479_22425 NC_019905.1 4934319 4935056 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); dihydromonapterin reductase 4934319..4935056 Pseudomonas putida HB3267 14290865 YP_007231318.1 CDS B479_22430 NC_019905.1 4935066 4935362 D COG3492 Uncharacterized protein conserved in bacteria; hypothetical protein 4935066..4935362 Pseudomonas putida HB3267 14290866 YP_007231319.1 CDS B479_22435 NC_019905.1 4935355 4935696 D HopJ type III effector protein 4935355..4935696 Pseudomonas putida HB3267 14290867 YP_007231320.1 CDS B479_22440 NC_019905.1 4935825 4936733 R COG4757 Predicted alpha/beta hydrolase; alpha/beta fold family hydrolase complement(4935825..4936733) Pseudomonas putida HB3267 14290868 YP_007231321.1 CDS B479_22445 NC_019905.1 4936901 4938112 R COG3007 Uncharacterized paraquat-inducible protein B; trans-2-enoyl-CoA reductase complement(4936901..4938112) Pseudomonas putida HB3267 14290869 YP_007231322.1 CDS B479_22450 NC_019905.1 4938356 4938889 R COG3658 Cytochrome b; cytochrome B561 complement(4938356..4938889) Pseudomonas putida HB3267 14290870 YP_007231323.1 CDS B479_22455 NC_019905.1 4938886 4939158 R COG5591 Uncharacterized conserved protein; hypothetical protein complement(4938886..4939158) Pseudomonas putida HB3267 14290871 YP_007231324.1 CDS B479_22460 NC_019905.1 4939329 4940507 D COG0183 Acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 4939329..4940507 Pseudomonas putida HB3267 14290872 YP_007231325.1 CDS B479_22465 NC_019905.1 4940644 4942935 R COG0620 Methionine synthase II (cobalamin-independent); 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase complement(4940644..4942935) Pseudomonas putida HB3267 14290873 YP_007231326.1 CDS B479_22470 NC_019905.1 4943251 4944738 D COG0685 5,10-methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase 4943251..4944738 Pseudomonas putida HB3267 14290874 YP_007231327.1 CDS B479_22475 NC_019905.1 4944698 4945675 R COG0523 Putative GTPases (G3E family); cobalamin synthesis protein P47K complement(4944698..4945675) Pseudomonas putida HB3267 14290875 YP_007231328.1 CDS B479_22480 NC_019905.1 4945861 4946058 R COG2879 Uncharacterized small protein; hypothetical protein complement(4945861..4946058) Pseudomonas putida HB3267 14290876 YP_007231329.1 CDS B479_22485 NC_019905.1 4946072 4948138 R COG1966 Carbon starvation protein, predicted membrane protein; carbon starvation protein CstA complement(4946072..4948138) Pseudomonas putida HB3267 14290877 YP_007231330.1 CDS B479_22490 NC_019905.1 4948317 4948679 D type IV pilus assembly PilZ 4948317..4948679 Pseudomonas putida HB3267 14290878 YP_007231331.1 CDS B479_22495 NC_019905.1 4948943 4950460 D COG2233 Xanthine/uracil permeases; uracil-xanthine permease 4948943..4950460 Pseudomonas putida HB3267 14290879 YP_007231332.1 CDS B479_22500 NC_019905.1 4950637 4952007 R COG1066 Predicted ATP-dependent serine protease; DNA repair protein RadA complement(4950637..4952007) Pseudomonas putida HB3267 14290880 YP_007231333.1 CDS mscL NC_019905.1 4952185 4952604 D COG1970 Large-conductance mechanosensitive channel; large-conductance mechanosensitive channel 4952185..4952604 Pseudomonas putida HB3267 14290881 YP_007231334.1 CDS B479_22510 NC_019905.1 4952739 4953515 R COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; oxidoreductase, FAD/NAD(P)-binding subunit complement(4952739..4953515) Pseudomonas putida HB3267 14290882 YP_007231335.1 CDS B479_22515 NC_019905.1 4953728 4954435 D COG2771 DNA-binding HTH domain-containing proteins; LuxR family transcriptional regulator 4953728..4954435 Pseudomonas putida HB3267 14290883 YP_007231336.1 CDS B479_22520 NC_019905.1 4954532 4955656 D COG2813 16S RNA G1207 methylase RsmC; rRNA (guanine-N(2)-)-methyltransferase 4954532..4955656 Pseudomonas putida HB3267 14290884 YP_007231337.1 CDS B479_22525 NC_019905.1 4955976 4956131 R hypothetical protein complement(4955976..4956131) Pseudomonas putida HB3267 14290885 YP_007231338.1 CDS B479_22530 NC_019905.1 4956141 4957148 R COG1294 Cytochrome bd-type quinol oxidase, subunit 2; cytochrome d ubiquinol oxidase subunit II complement(4956141..4957148) Pseudomonas putida HB3267 14290886 YP_007231339.1 CDS B479_22535 NC_019905.1 4957152 4958588 R COG1271 Cytochrome bd-type quinol oxidase, subunit 1; cytochrome bd ubiquinol oxidase subunit I complement(4957152..4958588) Pseudomonas putida HB3267 14290887 YP_007231340.1 CDS B479_22540 NC_019905.1 4958933 4960153 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily protein 4958933..4960153 Pseudomonas putida HB3267 14290888 YP_007231341.1 CDS B479_22545 NC_019905.1 4960435 4961730 D COG2252 Permeases; xanthine/uracil/vitamin C permease 4960435..4961730 Pseudomonas putida HB3267 14290889 YP_007231342.1 CDS B479_22550 NC_019905.1 4961727 4962812 D COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; tRNA (uracil-5-)-methyltransferase 4961727..4962812 Pseudomonas putida HB3267 14290890 YP_007231343.1 CDS B479_22555 NC_019905.1 4962940 4963545 R COG3485 Protocatechuate 3,4-dioxygenase beta subunit; protocatechuate 3,4-dioxygenase subunit alpha complement(4962940..4963545) Pseudomonas putida HB3267 14290891 YP_007231344.1 CDS B479_22560 NC_019905.1 4963556 4964275 R COG3485 Protocatechuate 3,4-dioxygenase beta subunit; protocatechuate 3,4-dioxygenase subunit beta complement(4963556..4964275) Pseudomonas putida HB3267 14290892 YP_007231345.1 CDS B479_22565 NC_019905.1 4964503 4965390 D COG2321 Predicted metalloprotease; metallopeptidase, zinc binding protein 4964503..4965390 Pseudomonas putida HB3267 14290893 YP_007231346.1 CDS B479_22570 NC_019905.1 4965637 4967556 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4965637..4967556 Pseudomonas putida HB3267 14290894 YP_007231347.1 CDS B479_22575 NC_019905.1 4967691 4969358 R COG0405 Gamma-glutamyltransferase; gamma-glutamyltransferase complement(4967691..4969358) Pseudomonas putida HB3267 14290895 YP_007231348.1 CDS B479_22580 NC_019905.1 4969476 4970372 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(4969476..4970372) Pseudomonas putida HB3267 14290896 YP_007231349.1 CDS B479_22585 NC_019905.1 4970445 4971035 R COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); NAD(P)H dehydrogenase (quinone) complement(4970445..4971035) Pseudomonas putida HB3267 14290897 YP_007231350.1 CDS B479_22590 NC_019905.1 4971192 4971506 D COG1359 Uncharacterized conserved protein; antibiotic biosynthesis monooxygenase 4971192..4971506 Pseudomonas putida HB3267 14290898 YP_007231351.1 CDS B479_22595 NC_019905.1 4971496 4972260 R COG0730 Predicted permeases; hypothetical protein complement(4971496..4972260) Pseudomonas putida HB3267 14290899 YP_007231352.1 CDS B479_22600 NC_019905.1 4972338 4973219 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 4972338..4973219 Pseudomonas putida HB3267 14290900 YP_007231353.1 CDS B479_22605 NC_019905.1 4973353 4973958 D COG0558 Phosphatidylglycerophosphate synthase; CDP-alcohol phosphatidyltransferase 4973353..4973958 Pseudomonas putida HB3267 14290901 YP_007231354.1 CDS B479_22610 NC_019905.1 4973989 4975743 D COG2267 Lysophospholipase; lysophospholipase 4973989..4975743 Pseudomonas putida HB3267 14290902 YP_007231355.1 CDS B479_22615 NC_019905.1 4975744 4977075 D COG0671 Membrane-associated phospholipid phosphatase; tyrosine phosphatase 4975744..4977075 Pseudomonas putida HB3267 14290903 YP_007231356.1 CDS B479_22620 NC_019905.1 4977072 4977503 D hypothetical protein 4977072..4977503 Pseudomonas putida HB3267 14290904 YP_007231357.1 CDS B479_22625 NC_019905.1 4977514 4978137 D COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; acyltransferase 4977514..4978137 Pseudomonas putida HB3267 14290905 YP_007231358.1 CDS B479_22630 NC_019905.1 4978139 4979071 D COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 4978139..4979071 Pseudomonas putida HB3267 14290906 YP_007231359.1 CDS B479_22635 NC_019905.1 4979288 4979563 R COG1937 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4979288..4979563) Pseudomonas putida HB3267 14290907 YP_007231360.1 CDS B479_22640 NC_019905.1 4979634 4980575 D COG1230 Co/Zn/Cd efflux system component; cation diffusion facilitator family transporter 4979634..4980575 Pseudomonas putida HB3267 14290908 YP_007231361.1 CDS B479_22645 NC_019905.1 4980672 4981016 D COG3450 Predicted enzyme of the cupin superfamily; hypothetical protein 4980672..4981016 Pseudomonas putida HB3267 14290909 YP_007231362.1 CDS B479_22650 NC_019905.1 4981324 4981812 D COG3157 Hemolysin-coregulated protein (uncharacterized); Hcp1 family type VI secretion system effector 4981324..4981812 Pseudomonas putida HB3267 14290910 YP_007231363.1 CDS B479_22655 NC_019905.1 4981823 4982800 D hypothetical protein 4981823..4982800 Pseudomonas putida HB3267 14290911 YP_007231364.1 CDS B479_22660 NC_019905.1 4982797 4983189 D hypothetical protein 4982797..4983189 Pseudomonas putida HB3267 14290912 YP_007231365.1 CDS B479_22665 NC_019905.1 4983280 4984167 R COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; 3-hydroxyisobutyrate dehydrogenase complement(4983280..4984167) Pseudomonas putida HB3267 14290913 YP_007231366.1 CDS B479_22670 NC_019905.1 4984178 4985704 R COG1012 NAD-dependent aldehyde dehydrogenases; methylmalonate-semialdehyde dehydrogenase complement(4984178..4985704) Pseudomonas putida HB3267 14290914 YP_007231367.1 CDS B479_22675 NC_019905.1 4985837 4986787 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 4985837..4986787 Pseudomonas putida HB3267 14290915 YP_007231368.1 CDS B479_22680 NC_019905.1 4987454 4987945 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; OmpA/MotB domain-containing protein complement(4987454..4987945) Pseudomonas putida HB3267 14290916 YP_007231369.1 CDS B479_22685 NC_019905.1 4987950 4989221 R COG2199 FOG: GGDEF domain; diguanylate cyclase complement(4987950..4989221) Pseudomonas putida HB3267 14290917 YP_007231370.1 CDS B479_22690 NC_019905.1 4989218 4989688 R hypothetical protein complement(4989218..4989688) Pseudomonas putida HB3267 14290918 YP_007231371.1 CDS B479_22695 NC_019905.1 4989980 4992055 R COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; exodeoxyribonuclease V subunit alpha complement(4989980..4992055) Pseudomonas putida HB3267 14290919 YP_007231372.1 CDS B479_22700 NC_019905.1 4992052 4995729 R COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); exodeoxyribonuclease V subunit beta complement(4992052..4995729) Pseudomonas putida HB3267 14290920 YP_007231373.1 CDS B479_22705 NC_019905.1 4995726 4999208 R COG1330 Exonuclease V gamma subunit; exodeoxyribonuclease V subunit gamma complement(4995726..4999208) Pseudomonas putida HB3267 14290921 YP_007231374.1 CDS B479_22710 NC_019905.1 5005317 5005913 R COG2717 Predicted membrane protein; sulfite oxidase subunit YedZ complement(5005317..5005913) Pseudomonas putida HB3267 14291788 YP_007231375.1 CDS B479_22715 NC_019905.1 5005913 5006926 R COG2041 Sulfite oxidase and related enzymes; TMAO/DMSO reductase complement(5005913..5006926) Pseudomonas putida HB3267 14290923 YP_007231376.1 CDS B479_22720 NC_019905.1 5007006 5007857 R COG1183 Phosphatidylserine synthase; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(5007006..5007857) Pseudomonas putida HB3267 14290924 YP_007231377.1 CDS B479_22725 NC_019905.1 5008008 5009024 R COG0059 Ketol-acid reductoisomerase; ketol-acid reductoisomerase complement(5008008..5009024) Pseudomonas putida HB3267 14290925 YP_007231378.1 CDS ilvH NC_019905.1 5009078 5009569 R COG0440 Acetolactate synthase, small (regulatory) subunit; acetolactate synthase 3 regulatory subunit complement(5009078..5009569) Pseudomonas putida HB3267 14290926 YP_007231379.1 CDS B479_22735 NC_019905.1 5009571 5011295 R COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; acetolactate synthase 3 catalytic subunit complement(5009571..5011295) Pseudomonas putida HB3267 14290927 YP_007231380.1 CDS B479_22740 NC_019905.1 5011704 5012036 R COG3098 Uncharacterized protein conserved in bacteria; hypothetical protein complement(5011704..5012036) Pseudomonas putida HB3267 14290928 YP_007231381.1 CDS B479_22745 NC_019905.1 5012036 5012842 R COG0457 FOG: TPR repeat; hypothetical protein complement(5012036..5012842) Pseudomonas putida HB3267 14290929 YP_007231382.1 CDS B479_22750 NC_019905.1 5012870 5015191 R COG0744 Membrane carboxypeptidase (penicillin-binding protein); penicillin-binding protein 1B complement(5012870..5015191) Pseudomonas putida HB3267 14290930 YP_007231383.1 CDS B479_22755 NC_019905.1 5015308 5016870 D COG2187 Uncharacterized protein conserved in bacteria; hypothetical protein 5015308..5016870 Pseudomonas putida HB3267 14290931 YP_007231384.1 CDS B479_22760 NC_019905.1 5017048 5017326 D COG3070 Regulator of competence-specific genes; TfoX domain-containing protein 5017048..5017326 Pseudomonas putida HB3267 14290932 YP_007231385.1 CDS B479_22765 NC_019905.1 5017505 5018386 R COG3016 Uncharacterized iron-regulated protein; hypothetical protein complement(5017505..5018386) Pseudomonas putida HB3267 14290933 YP_007231386.1 CDS hmuV NC_019905.1 5018554 5019321 R COG4559 ABC-type hemin transport system, ATPase component; hemin importer ATP-binding subunit complement(5018554..5019321) Pseudomonas putida HB3267 14290934 YP_007231387.1 CDS B479_22775 NC_019905.1 5019321 5020358 R COG0609 ABC-type Fe3+-siderophore transport system, permease component; transport system permease complement(5019321..5020358) Pseudomonas putida HB3267 14290935 YP_007231388.1 CDS B479_22780 NC_019905.1 5020355 5021236 R COG4558 ABC-type hemin transport system, periplasmic component; periplasmic binding protein complement(5020355..5021236) Pseudomonas putida HB3267 14290936 YP_007231389.1 CDS B479_22785 NC_019905.1 5021388 5021705 D COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases; Rieske (2Fe-2S) domain-containing protein 5021388..5021705 Pseudomonas putida HB3267 14290937 YP_007231390.1 CDS B479_22790 NC_019905.1 5021695 5022408 R COG1489 DNA-binding protein, stimulates sugar fermentation; DNA-binding transcriptional regulator complement(5021695..5022408) Pseudomonas putida HB3267 14290938 YP_007231391.1 CDS B479_22795 NC_019905.1 5022408 5023580 R COG0436 Aspartate/tyrosine/aromatic aminotransferase; hypothetical protein complement(5022408..5023580) Pseudomonas putida HB3267 14290939 YP_007231392.1 CDS B479_22800 NC_019905.1 5023791 5024234 D COG1734 DnaK suppressor protein; TraR/DksA family transcriptional regulator 5023791..5024234 Pseudomonas putida HB3267 14290940 YP_007231393.1 CDS B479_22805 NC_019905.1 5024299 5025186 D COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-Q tRNA(Asp) ligase 5024299..5025186 Pseudomonas putida HB3267 14290941 YP_007231394.1 CDS B479_22810 NC_019905.1 5025432 5025608 D hypothetical protein 5025432..5025608 Pseudomonas putida HB3267 14290942 YP_007231395.1 CDS B479_22815 NC_019905.1 5025598 5028567 D COG0591 Na+/proline symporter; multi-sensor signal transduction histidine kinase 5025598..5028567 Pseudomonas putida HB3267 14290943 YP_007231396.1 CDS B479_22820 NC_019905.1 5028572 5030014 D COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; two component sigma54 specific Fis family transcriptional regulator 5028572..5030014 Pseudomonas putida HB3267 14290944 YP_007231397.1 CDS B479_22825 NC_019905.1 5030854 5032242 D COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; poly(A) polymerase 5030854..5032242 Pseudomonas putida HB3267 14290945 YP_007231398.1 CDS B479_22830 NC_019905.1 5032239 5032718 D COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 5032239..5032718 Pseudomonas putida HB3267 14290946 YP_007231399.1 CDS panB NC_019905.1 5032981 5033781 D COG0413 Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 5032981..5033781 Pseudomonas putida HB3267 14290947 YP_007231400.1 CDS panC NC_019905.1 5033778 5034641 D COG0414 Panthothenate synthetase; pantoate--beta-alanine ligase 5033778..5034641 Pseudomonas putida HB3267 14290948 YP_007231401.1 CDS pgi NC_019905.1 5034869 5036533 D COG0166 Glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 5034869..5036533 Pseudomonas putida HB3267 14290949 YP_007231402.1 CDS B479_22850 NC_019905.1 5036664 5038598 D COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; acetyl-CoA synthetase 5036664..5038598 Pseudomonas putida HB3267 14290950 YP_007231403.1 CDS B479_22855 NC_019905.1 5038641 5039510 D COG3662 Uncharacterized protein conserved in bacteria; hypothetical protein 5038641..5039510 Pseudomonas putida HB3267 14290951 YP_007231404.1 CDS B479_22860 NC_019905.1 5039589 5042525 D hypothetical protein 5039589..5042525 Pseudomonas putida HB3267 14290952 YP_007231405.1 CDS B479_22865 NC_019905.1 5042647 5043060 R COG0346 Lactoylglutathione lyase and related lyases; glyoxalase/bleomycin resistance protein/dioxygenase complement(5042647..5043060) Pseudomonas putida HB3267 14290953 YP_007231406.1 CDS B479_22870 NC_019905.1 5043121 5043423 D COG1359 Uncharacterized conserved protein; antibiotic biosynthesis monooxygenase 5043121..5043423 Pseudomonas putida HB3267 14290954 YP_007231407.1 CDS B479_22875 NC_019905.1 5043502 5043852 R COG2823 Predicted periplasmic or secreted lipoprotein; transport-associated protein complement(5043502..5043852) Pseudomonas putida HB3267 14290955 YP_007231408.1 CDS B479_22880 NC_019905.1 5044117 5046222 R COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase complement(5044117..5046222) Pseudomonas putida HB3267 14290956 YP_007231409.1 CDS rpsO NC_019905.1 5046473 5046742 R COG0184 Ribosomal protein S15P/S13E; 30S ribosomal protein S15 complement(5046473..5046742) Pseudomonas putida HB3267 14290957 YP_007231410.1 CDS truB NC_019905.1 5046890 5047807 R COG0130 Pseudouridine synthase; tRNA pseudouridine synthase B complement(5046890..5047807) Pseudomonas putida HB3267 14290958 YP_007231411.1 CDS rbfA NC_019905.1 5047811 5048209 R COG0858 Ribosome-binding factor A; ribosome-binding factor A complement(5047811..5048209) Pseudomonas putida HB3267 14290959 YP_007231412.1 CDS infB NC_019905.1 5048326 5050866 R COG0532 Translation initiation factor 2 (IF-2; GTPase); translation initiation factor IF-2 complement(5048326..5050866) Pseudomonas putida HB3267 14290960 YP_007231413.1 CDS nusA NC_019905.1 5050894 5052375 R COG0195 Transcription elongation factor; transcription elongation factor NusA complement(5050894..5052375) Pseudomonas putida HB3267 14290961 YP_007231414.1 CDS B479_22910 NC_019905.1 5052435 5052893 R COG0779 Uncharacterized protein conserved in bacteria; ribosome maturation protein RimP complement(5052435..5052893) Pseudomonas putida HB3267 14290962 YP_007231415.1 CDS secG NC_019905.1 5053308 5053706 R COG1314 Preprotein translocase subunit SecG; preprotein translocase subunit SecG complement(5053308..5053706) Pseudomonas putida HB3267 14291769 YP_007231416.1 CDS tpiA NC_019905.1 5053711 5054466 R COG0149 Triosephosphate isomerase; triosephosphate isomerase complement(5053711..5054466) Pseudomonas putida HB3267 14290964 YP_007231417.1 CDS glmM NC_019905.1 5054532 5055872 R COG1109 Phosphomannomutase; phosphoglucosamine mutase complement(5054532..5055872) Pseudomonas putida HB3267 14290965 YP_007231418.1 CDS B479_22930 NC_019905.1 5055889 5056740 R COG0294 Dihydropteroate synthase and related enzymes; dihydropteroate synthase complement(5055889..5056740) Pseudomonas putida HB3267 14290966 YP_007231419.1 CDS B479_22935 NC_019905.1 5056749 5058653 R COG0465 ATP-dependent Zn proteases; ATP-dependent metalloprotease FtsH complement(5056749..5058653) Pseudomonas putida HB3267 14290967 YP_007231420.1 CDS rrmJ NC_019905.1 5058857 5059483 R COG0293 23S rRNA methylase; 23S rRNA methyltransferase J complement(5058857..5059483) Pseudomonas putida HB3267 14290968 YP_007231421.1 CDS B479_22945 NC_019905.1 5059586 5059894 D COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein; hypothetical protein 5059586..5059894 Pseudomonas putida HB3267 14290969 YP_007231422.1 CDS B479_22950 NC_019905.1 5060036 5060383 R hypothetical protein complement(5060036..5060383) Pseudomonas putida HB3267 14290970 YP_007231423.1 CDS greA NC_019905.1 5060454 5060915 R COG0782 Transcription elongation factor; transcription elongation factor GreA complement(5060454..5060915) Pseudomonas putida HB3267 14290971 YP_007231424.1 CDS carB NC_019905.1 5060933 5064154 R COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); carbamoyl phosphate synthase large subunit complement(5060933..5064154) Pseudomonas putida HB3267 14290972 YP_007231425.1 CDS B479_22965 NC_019905.1 5064260 5065396 R COG0505 Carbamoylphosphate synthase small subunit; carbamoyl phosphate synthase small subunit complement(5064260..5065396) Pseudomonas putida HB3267 14290973 YP_007231426.1 CDS B479_22970 NC_019905.1 5065663 5066469 R COG0289 Dihydrodipicolinate reductase; dihydrodipicolinate reductase complement(5065663..5066469) Pseudomonas putida HB3267 14290974 YP_007231427.1 CDS B479_22975 NC_019905.1 5066483 5067607 R COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; chaperone protein DnaJ complement(5066483..5067607) Pseudomonas putida HB3267 14290975 YP_007231428.1 CDS dnaK NC_019905.1 5067805 5069730 R COG0443 Molecular chaperone; molecular chaperone DnaK complement(5067805..5069730) Pseudomonas putida HB3267 14290976 YP_007231429.1 CDS B479_22985 NC_019905.1 5067859 5069751 D COG1070 Sugar (pentulose and hexulose) kinases; hypothetical protein 5067859..5069751 Pseudomonas putida HB3267 14290977 YP_007231430.1 CDS B479_22990 NC_019905.1 5069832 5070389 R COG0576 Molecular chaperone GrpE (heat shock protein); heat shock protein GrpE complement(5069832..5070389) Pseudomonas putida HB3267 14290978 YP_007231431.1 CDS B479_22995 NC_019905.1 5070581 5072254 D COG0497 ATPase involved in DNA repair; DNA repair protein RecN 5070581..5072254 Pseudomonas putida HB3267 14290979 YP_007231432.1 CDS B479_23000 NC_019905.1 5072461 5072865 R COG0735 Fe2+/Zn2+ uptake regulation proteins; ferric uptake regulation protein complement(5072461..5072865) Pseudomonas putida HB3267 14290980 YP_007231433.1 CDS B479_23005 NC_019905.1 5072963 5073496 D COG2913 Small protein A (tmRNA-binding); SmpA/OmlA domain-containing protein 5072963..5073496 Pseudomonas putida HB3267 14290981 YP_007231434.1 CDS B479_23010 NC_019905.1 5073558 5073992 R COG2867 Oligoketide cyclase/lipid transport protein; cyclase/dehydrase complement(5073558..5073992) Pseudomonas putida HB3267 14290982 YP_007231435.1 CDS smpB NC_019905.1 5074155 5074637 D COG0691 tmRNA-binding protein; SsrA-binding protein 5074155..5074637 Pseudomonas putida HB3267 14290983 YP_007231436.1 CDS B479_23020 NC_019905.1 5074764 5075531 R COG2186 Transcriptional regulators; GntR family transcriptional regulator complement(5074764..5075531) Pseudomonas putida HB3267 14290984 YP_007231437.1 CDS B479_23025 NC_019905.1 5075788 5077458 D COG1620 L-lactate permease; L-lactate transport 5075788..5077458 Pseudomonas putida HB3267 14290985 YP_007231438.1 CDS lldD NC_019905.1 5077522 5078667 D COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases; L-lactate dehydrogenase 5077522..5078667 Pseudomonas putida HB3267 14290986 YP_007231439.1 CDS B479_23035 NC_019905.1 5078743 5081553 D COG0277 FAD/FMN-containing dehydrogenases; D-lactate dehydrogenase 5078743..5081553 Pseudomonas putida HB3267 14290987 YP_007231440.1 CDS B479_23040 NC_019905.1 5081840 5082136 D hypothetical protein 5081840..5082136 Pseudomonas putida HB3267 14290988 YP_007231441.1 CDS B479_23045 NC_019905.1 5082218 5082454 R hypothetical protein complement(5082218..5082454) Pseudomonas putida HB3267 14290989 YP_007231442.1 CDS B479_23050 NC_019905.1 5082815 5084071 D COG0582 Integrase; integrase family protein 5082815..5084071 Pseudomonas putida HB3267 14290990 YP_007231443.1 CDS B479_23055 NC_019905.1 5084485 5084742 D hypothetical protein 5084485..5084742 Pseudomonas putida HB3267 14290991 YP_007231444.1 CDS B479_23060 NC_019905.1 5084814 5085782 D hypothetical protein 5084814..5085782 Pseudomonas putida HB3267 14290992 YP_007231445.1 CDS B479_23065 NC_019905.1 5085873 5086862 D COG5377 Phage-related protein, predicted endonuclease; phage-like protein endonuclease-like protein 5085873..5086862 Pseudomonas putida HB3267 14290993 YP_007231446.1 CDS B479_23070 NC_019905.1 5086940 5087854 D hypothetical protein 5086940..5087854 Pseudomonas putida HB3267 14290994 YP_007231447.1 CDS B479_23075 NC_019905.1 5087904 5088401 D COG2003 DNA repair proteins; DNA repair protein RadC 5087904..5088401 Pseudomonas putida HB3267 14290995 YP_007231448.1 CDS B479_23080 NC_019905.1 5088515 5090053 R hypothetical protein complement(5088515..5090053) Pseudomonas putida HB3267 14290996 YP_007231449.1 CDS B479_23085 NC_019905.1 5090267 5090674 D hypothetical protein 5090267..5090674 Pseudomonas putida HB3267 14290997 YP_007231450.1 CDS B479_23090 NC_019905.1 5090712 5093543 R COG1483 Predicted ATPase (AAA+ superfamily); hypothetical protein complement(5090712..5093543) Pseudomonas putida HB3267 14290998 YP_007231451.1 CDS B479_23095 NC_019905.1 5093563 5094921 R COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; hypothetical protein complement(5093563..5094921) Pseudomonas putida HB3267 14290999 YP_007231452.1 CDS B479_23100 NC_019905.1 5094918 5097014 R COG0514 Superfamily II DNA helicase; ATP-dependent DNA helicase RecQ complement(5094918..5097014) Pseudomonas putida HB3267 14291000 YP_007231453.1 CDS B479_23105 NC_019905.1 5097054 5098163 R COG1743 Adenine-specific DNA methylase containing a Zn-ribbon; hypothetical protein complement(5097054..5098163) Pseudomonas putida HB3267 14291001 YP_007231454.1 CDS B479_23110 NC_019905.1 5099100 5099486 D hypothetical protein 5099100..5099486 Pseudomonas putida HB3267 14291002 YP_007231455.1 CDS B479_23115 NC_019905.1 5099580 5099813 D hypothetical protein 5099580..5099813 Pseudomonas putida HB3267 14291003 YP_007231456.1 CDS B479_23120 NC_019905.1 5099964 5100605 R hypothetical protein complement(5099964..5100605) Pseudomonas putida HB3267 14291004 YP_007231457.1 CDS B479_23125 NC_019905.1 5100609 5102039 R COG3950 Predicted ATP-binding protein involved in virulence; ATP-binding protein complement(5100609..5102039) Pseudomonas putida HB3267 14291005 YP_007231458.1 CDS B479_23130 NC_019905.1 5102036 5105569 R COG0553 Superfamily II DNA/RNA helicases, SNF2 family; Type III restriction enzyme, res subunit family protein complement(5102036..5105569) Pseudomonas putida HB3267 14291006 YP_007231459.1 CDS B479_23135 NC_019905.1 5105691 5105948 R hypothetical protein complement(5105691..5105948) Pseudomonas putida HB3267 14291007 YP_007231460.1 CDS B479_23140 NC_019905.1 5106067 5106942 D COG2378 Predicted transcriptional regulator; transcriptional regulator 5106067..5106942 Pseudomonas putida HB3267 14291008 YP_007231461.1 CDS B479_23145 NC_019905.1 5107167 5107349 D hypothetical protein 5107167..5107349 Pseudomonas putida HB3267 14291009 YP_007231462.1 CDS B479_23150 NC_019905.1 5107471 5108541 D COG2378 Predicted transcriptional regulator; transcriptional factor 5107471..5108541 Pseudomonas putida HB3267 14291010 YP_007231463.1 CDS B479_23155 NC_019905.1 5108538 5110103 D hypothetical protein 5108538..5110103 Pseudomonas putida HB3267 14291011 YP_007231464.1 CDS B479_23160 NC_019905.1 5110153 5110785 D hypothetical protein 5110153..5110785 Pseudomonas putida HB3267 14291012 YP_007231465.1 CDS B479_23165 NC_019905.1 5110796 5111824 D hypothetical protein 5110796..5111824 Pseudomonas putida HB3267 14291013 YP_007231466.1 CDS B479_23170 NC_019905.1 5111908 5112183 D COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein 5111908..5112183 Pseudomonas putida HB3267 14291014 YP_007231467.1 CDS B479_23175 NC_019905.1 5112349 5112510 D transposase IS66 5112349..5112510 Pseudomonas putida HB3267 14291015 YP_007231468.1 CDS B479_23180 NC_019905.1 5112637 5114361 R COG1479 Uncharacterized conserved protein; hypothetical protein complement(5112637..5114361) Pseudomonas putida HB3267 14291016 YP_007231469.1 CDS B479_23185 NC_019905.1 5114756 5115355 R transposase complement(5114756..5115355) Pseudomonas putida HB3267 14291017 YP_007231470.1 CDS B479_23190 NC_019905.1 5115816 5116019 R COG3311 Predicted transcriptional regulator; phage transcriptional regulator, AlpA complement(5115816..5116019) Pseudomonas putida HB3267 14291018 YP_007231471.1 CDS B479_23195 NC_019905.1 5116736 5117446 D hypothetical protein 5116736..5117446 Pseudomonas putida HB3267 14291019 YP_007231472.1 CDS B479_23200 NC_019905.1 5117561 5117992 R COG0582 Integrase; integrase family protein complement(5117561..5117992) Pseudomonas putida HB3267 14291020 YP_007231473.1 CDS B479_23205 NC_019905.1 5118623 5120161 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(5118623..5120161) Pseudomonas putida HB3267 14291021 YP_007231474.1 CDS B479_23210 NC_019905.1 5120432 5121295 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 5120432..5121295 Pseudomonas putida HB3267 14291022 YP_007231475.1 CDS B479_23215 NC_019905.1 5121353 5122744 R COG1113 Gamma-aminobutyrate permease and related permeases; amino acid permease-associated protein complement(5121353..5122744) Pseudomonas putida HB3267 14291023 YP_007231476.1 CDS gudD NC_019905.1 5123297 5124643 R COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; glucarate dehydratase complement(5123297..5124643) Pseudomonas putida HB3267 14291024 YP_007231477.1 CDS B479_23225 NC_019905.1 5124663 5126015 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(5124663..5126015) Pseudomonas putida HB3267 14291025 YP_007231478.1 CDS B479_23230 NC_019905.1 5126277 5126984 D COG2186 Transcriptional regulators; GntR family transcriptional regulator 5126277..5126984 Pseudomonas putida HB3267 14291026 YP_007231479.1 CDS B479_23235 NC_019905.1 5127133 5128143 R COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases; alcohol dehydrogenase complement(5127133..5128143) Pseudomonas putida HB3267 14291027 YP_007231480.1 CDS B479_23240 NC_019905.1 5128307 5128897 R COG0546 Predicted phosphatases; HAD family hydrolase complement(5128307..5128897) Pseudomonas putida HB3267 14291028 YP_007231481.1 CDS B479_23245 NC_019905.1 5128894 5129763 R COG1946 Acyl-CoA thioesterase; acyl-CoA thioesterase II complement(5128894..5129763) Pseudomonas putida HB3267 14291029 YP_007231482.1 CDS B479_23250 NC_019905.1 5129911 5130480 R COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; PAP2 family protein/DedA family protein complement(5129911..5130480) Pseudomonas putida HB3267 14291030 YP_007231483.1 CDS B479_23255 NC_019905.1 5130660 5131346 D COG2062 Phosphohistidine phosphatase SixA; putative phosphohistidine phosphatase, SixA 5130660..5131346 Pseudomonas putida HB3267 14291031 YP_007231484.1 CDS B479_23260 NC_019905.1 5131530 5132444 D COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein; histone deacetylase superfamily protein 5131530..5132444 Pseudomonas putida HB3267 14291032 YP_007231485.1 CDS B479_23265 NC_019905.1 5132593 5133834 D COG2081 Predicted flavoproteins; hypothetical protein 5132593..5133834 Pseudomonas putida HB3267 14291033 YP_007231486.1 CDS B479_23270 NC_019905.1 5133961 5135292 R COG0513 Superfamily II DNA and RNA helicases; DEAD/DEAH box helicase complement(5133961..5135292) Pseudomonas putida HB3267 14291034 YP_007231487.1 CDS B479_23275 NC_019905.1 5135348 5136268 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; DMT superfamily transporter inner membrane protein complement(5135348..5136268) Pseudomonas putida HB3267 14291035 YP_007231488.1 CDS B479_23280 NC_019905.1 5136423 5136872 D COG1522 Transcriptional regulators; AsnC family transcriptional regulator 5136423..5136872 Pseudomonas putida HB3267 14291036 YP_007231489.1 CDS B479_23285 NC_019905.1 5136869 5137474 R COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; DNA polymerase III subunit epsilon complement(5136869..5137474) Pseudomonas putida HB3267 14291037 YP_007231490.1 CDS B479_23290 NC_019905.1 5137484 5137963 R COG1432 Uncharacterized conserved protein; hypothetical protein complement(5137484..5137963) Pseudomonas putida HB3267 14291038 YP_007231491.1 CDS B479_23295 NC_019905.1 5138126 5138881 R COG3416 Uncharacterized protein conserved in bacteria; putative periplasmic ligand-binding sensor protein complement(5138126..5138881) Pseudomonas putida HB3267 14291039 YP_007231492.1 CDS B479_23300 NC_019905.1 5139048 5139704 D hypothetical protein 5139048..5139704 Pseudomonas putida HB3267 14291040 YP_007231493.1 CDS B479_23305 NC_019905.1 5139741 5141891 R COG1643 HrpA-like helicases; ATP-dependent helicase HrpB complement(5139741..5141891) Pseudomonas putida HB3267 14291041 YP_007231494.1 CDS B479_23310 NC_019905.1 5141875 5142270 R COG1643 HrpA-like helicases; ATP-dependent helicase HrpB complement(5141875..5142270) Pseudomonas putida HB3267 14291042 YP_007231495.1 CDS B479_23315 NC_019905.1 5142387 5142806 D COG0477 Permeases of the major facilitator superfamily; hypothetical protein 5142387..5142806 Pseudomonas putida HB3267 14291043 YP_007231496.1 CDS B479_23320 NC_019905.1 5142829 5143701 D COG0053 Predicted Co/Zn/Cd cation transporters; cation diffusion facilitator family transporter 5142829..5143701 Pseudomonas putida HB3267 14291044 YP_007231497.1 CDS B479_23325 NC_019905.1 5143909 5144694 R COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; hypothetical protein complement(5143909..5144694) Pseudomonas putida HB3267 14291045 YP_007231498.1 CDS B479_23330 NC_019905.1 5145089 5145565 D COG1522 Transcriptional regulators; AsnC family transcriptional regulator 5145089..5145565 Pseudomonas putida HB3267 14291046 YP_007231499.1 CDS B479_23335 NC_019905.1 5145620 5145823 D hypothetical protein 5145620..5145823 Pseudomonas putida HB3267 14291047 YP_007231500.1 CDS B479_23340 NC_019905.1 5145960 5146598 R COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; pseudouridine synthase complement(5145960..5146598) Pseudomonas putida HB3267 14291048 YP_007231501.1 CDS B479_23345 NC_019905.1 5146605 5148068 R COG0775 Nucleoside phosphorylase; AMP nucleosidase complement(5146605..5148068) Pseudomonas putida HB3267 14291049 YP_007231502.1 CDS B479_23350 NC_019905.1 5148284 5149936 R COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase complement(5148284..5149936) Pseudomonas putida HB3267 14291050 YP_007231503.1 CDS B479_23355 NC_019905.1 5150093 5152081 R COG0642 Signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(5150093..5152081) Pseudomonas putida HB3267 14291051 YP_007231504.1 CDS B479_23360 NC_019905.1 5152347 5153144 D COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase 5152347..5153144 Pseudomonas putida HB3267 14291052 YP_007231505.1 CDS thiE NC_019905.1 5153158 5153781 D COG0352 Thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 5153158..5153781 Pseudomonas putida HB3267 14291053 YP_007231506.1 CDS B479_23370 NC_019905.1 5153797 5155080 D COG0001 Glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde aminotransferase 5153797..5155080 Pseudomonas putida HB3267 14291054 YP_007231507.1 CDS B479_23375 NC_019905.1 5155370 5155915 D COG0790 FOG: TPR repeat, SEL1 subfamily; Sel1 domain-containing protein 5155370..5155915 Pseudomonas putida HB3267 14291055 YP_007231508.1 CDS B479_23380 NC_019905.1 5155919 5156245 R COG4517 Uncharacterized protein conserved in bacteria; hypothetical protein complement(5155919..5156245) Pseudomonas putida HB3267 14291056 YP_007231509.1 CDS B479_23385 NC_019905.1 5156522 5157520 D COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase; PhoH family protein 5156522..5157520 Pseudomonas putida HB3267 14291057 YP_007231510.1 CDS B479_23390 NC_019905.1 5157513 5157986 D COG0319 Predicted metal-dependent hydrolase; metal-binding heat shock protein 5157513..5157986 Pseudomonas putida HB3267 14291058 YP_007231511.1 CDS B479_23395 NC_019905.1 5158012 5158851 D COG4535 Putative Mg2+ and Co2+ transporter CorC; hypothetical protein 5158012..5158851 Pseudomonas putida HB3267 14291059 YP_007231512.1 CDS lnt NC_019905.1 5158860 5160377 D COG0815 Apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 5158860..5160377 Pseudomonas putida HB3267 14291060 YP_007231513.1 CDS B479_23405 NC_019905.1 5160533 5161294 R COG1434 Uncharacterized conserved protein; hypothetical protein complement(5160533..5161294) Pseudomonas putida HB3267 14291061 YP_007231514.1 CDS B479_23410 NC_019905.1 5161430 5161744 R hypothetical protein complement(5161430..5161744) Pseudomonas putida HB3267 14291062 YP_007231515.1 CDS leuS NC_019905.1 5161972 5164578 D COG0495 Leucyl-tRNA synthetase; leucyl-tRNA ligase 5161972..5164578 Pseudomonas putida HB3267 14291063 YP_007231516.1 CDS B479_23420 NC_019905.1 5164639 5165244 D COG2980 Rare lipoprotein B; rare lipoprotein B 5164639..5165244 Pseudomonas putida HB3267 14291064 YP_007231517.1 CDS holA NC_019905.1 5165284 5166321 D COG1466 DNA polymerase III, delta subunit; DNA polymerase III subunit delta 5165284..5166321 Pseudomonas putida HB3267 14291065 YP_007231518.1 CDS B479_23430 NC_019905.1 5166525 5166689 D COG3036 Uncharacterized protein conserved in bacteria; hypothetical protein 5166525..5166689 Pseudomonas putida HB3267 14291066 YP_007231519.1 CDS B479_23435 NC_019905.1 5166750 5168066 D COG2951 Membrane-bound lytic murein transglycosylase B; lytic murein transglycosylase 5166750..5168066 Pseudomonas putida HB3267 14291067 YP_007231520.1 CDS B479_23440 NC_019905.1 5168201 5169139 R COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF; peptidase U61 LD-carboxypeptidase A complement(5168201..5169139) Pseudomonas putida HB3267 14291068 YP_007231521.1 CDS B479_23445 NC_019905.1 5169227 5170243 R COG0320 Lipoate synthase; lipoyl synthase complement(5169227..5170243) Pseudomonas putida HB3267 14291069 YP_007231522.1 CDS B479_23450 NC_019905.1 5170246 5170893 R COG0321 Lipoate-protein ligase B; lipoate-protein ligase B complement(5170246..5170893) Pseudomonas putida HB3267 14291070 YP_007231523.1 CDS B479_23455 NC_019905.1 5170893 5171168 R COG2921 Uncharacterized conserved protein; hypothetical protein complement(5170893..5171168) Pseudomonas putida HB3267 14291071 YP_007231524.1 CDS B479_23460 NC_019905.1 5171242 5172402 R COG1686 D-alanyl-D-alanine carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase complement(5171242..5172402) Pseudomonas putida HB3267 14291072 YP_007231525.1 CDS B479_23465 NC_019905.1 5172629 5173630 R COG0797 Lipoproteins; rare lipoprotein A complement(5172629..5173630) Pseudomonas putida HB3267 14291073 YP_007231526.1 CDS B479_23470 NC_019905.1 5173630 5174640 R COG2951 Membrane-bound lytic murein transglycosylase B; lytic murein transglycosylase B complement(5173630..5174640) Pseudomonas putida HB3267 14291074 YP_007231527.1 CDS B479_23475 NC_019905.1 5174658 5175761 R COG0772 Bacterial cell division membrane protein; rod shape-determining protein RodA complement(5174658..5175761) Pseudomonas putida HB3267 14291075 YP_007231528.1 CDS B479_23480 NC_019905.1 5175800 5177689 R COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 2 complement(5175800..5177689) Pseudomonas putida HB3267 14291076 YP_007231529.1 CDS B479_23485 NC_019905.1 5177706 5178173 R COG1576 Uncharacterized conserved protein; rRNA large subunit methyltransferase complement(5177706..5178173) Pseudomonas putida HB3267 14291077 YP_007231530.1 CDS B479_23490 NC_019905.1 5178184 5178603 R COG0799 Uncharacterized homolog of plant Iojap protein; iojap family protein complement(5178184..5178603) Pseudomonas putida HB3267 14291078 YP_007231531.1 CDS nadD NC_019905.1 5178647 5179306 R COG1057 Nicotinic acid mononucleotide adenylyltransferase; nicotinic acid mononucleotide adenylyltransferase complement(5178647..5179306) Pseudomonas putida HB3267 14291079 YP_007231532.1 CDS proA NC_019905.1 5179308 5180579 R COG0014 Gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase complement(5179308..5180579) Pseudomonas putida HB3267 14291080 YP_007231533.1 CDS B479_23505 NC_019905.1 5180907 5181575 D COG2094 3-methyladenine DNA glycosylase; 3-methyladenine DNA glycosylase 5180907..5181575 Pseudomonas putida HB3267 14291081 YP_007231534.1 CDS B479_23510 NC_019905.1 5181579 5182895 D COG0586 Uncharacterized membrane-associated protein; N-acetyltransferase GCN5 5181579..5182895 Pseudomonas putida HB3267 14291082 YP_007231535.1 CDS B479_23515 NC_019905.1 5183007 5183597 R COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease; peptidase S16 lon domain-containing protein complement(5183007..5183597) Pseudomonas putida HB3267 14291083 YP_007231536.1 CDS B479_23520 NC_019905.1 5183607 5184323 R COG1346 Putative effector of murein hydrolase; LrgB family protein complement(5183607..5184323) Pseudomonas putida HB3267 14291084 YP_007231537.1 CDS B479_23525 NC_019905.1 5184320 5184682 R LrgA family protein complement(5184320..5184682) Pseudomonas putida HB3267 14291085 YP_007231538.1 CDS B479_23530 NC_019905.1 5184826 5185281 D COG2030 Acyl dehydratase; dehydratase 5184826..5185281 Pseudomonas putida HB3267 14291086 YP_007231539.1 CDS prmA NC_019905.1 5185480 5186358 D COG2264 Ribosomal protein L11 methylase; ribosomal protein L11 methyltransferase 5185480..5186358 Pseudomonas putida HB3267 14291087 YP_007231540.1 CDS B479_23540 NC_019905.1 5186401 5187756 D CDGSH-type zinc finger protein 5186401..5187756 Pseudomonas putida HB3267 14291088 YP_007231541.1 CDS B479_23545 NC_019905.1 5188010 5189023 D COG0042 tRNA-dihydrouridine synthase; NifR3 family TIM-barrel protein 5188010..5189023 Pseudomonas putida HB3267 14291089 YP_007231542.1 CDS fis NC_019905.1 5189020 5189340 D COG2901 Factor for inversion stimulation Fis, transcriptional activator; global DNA-binding transcriptional dual regulator Fis 5189020..5189340 Pseudomonas putida HB3267 14291090 YP_007231543.1 CDS purH NC_019905.1 5189422 5191029 D COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 5189422..5191029 Pseudomonas putida HB3267 14291091 YP_007231544.1 CDS B479_23560 NC_019905.1 5191212 5192507 D COG0151 Phosphoribosylamine-glycine ligase; phosphoribosylamine--glycine ligase 5191212..5192507 Pseudomonas putida HB3267 14291092 YP_007231545.1 CDS B479_23565 NC_019905.1 5192652 5195423 D COG0642 Signal transduction histidine kinase; integral membrane sensor hybrid histidine kinase 5192652..5195423 Pseudomonas putida HB3267 14291093 YP_007231546.1 CDS B479_23570 NC_019905.1 5195598 5196194 D COG2095 Multiple antibiotic transporter; multiple antibiotic resistance (MarC)-like protein 5195598..5196194 Pseudomonas putida HB3267 14291094 YP_007231547.1 CDS B479_23575 NC_019905.1 5196202 5196831 R hypothetical protein complement(5196202..5196831) Pseudomonas putida HB3267 14291095 YP_007231548.1 CDS B479_23580 NC_019905.1 5196915 5197595 R hypothetical protein complement(5196915..5197595) Pseudomonas putida HB3267 14291096 YP_007231549.1 CDS B479_23585 NC_019905.1 5197689 5199371 R COG2073 Cobalamin biosynthesis protein CbiG; precorrin-3B C(17)-methyltransferase complement(5197689..5199371) Pseudomonas putida HB3267 14291097 YP_007231550.1 CDS B479_23590 NC_019905.1 5199374 5200105 R COG2243 Precorrin-2 methylase; precorrin-2 C(20)-methyltransferase complement(5199374..5200105) Pseudomonas putida HB3267 14291098 YP_007231551.1 CDS cobH NC_019905.1 5200105 5200731 R COG2082 Precorrin isomerase; precorrin-8X methylmutase complement(5200105..5200731) Pseudomonas putida HB3267 14291099 YP_007231552.1 CDS B479_23600 NC_019905.1 5200724 5201986 R COG0155 Sulfite reductase, beta subunit (hemoprotein); precorrin-3B synthase complement(5200724..5201986) Pseudomonas putida HB3267 14291100 YP_007231553.1 CDS B479_23605 NC_019905.1 5202283 5203494 D COG2241 Precorrin-6B methylase 1; precorrin-6y C5,15-methyltransferase (decarboxylating) CbiE subunit 5202283..5203494 Pseudomonas putida HB3267 14291101 YP_007231554.1 CDS cbiD NC_019905.1 5203487 5204581 D COG1903 Cobalamin biosynthesis protein CbiD; cobalt-precorrin-6A synthase 5203487..5204581 Pseudomonas putida HB3267 14291102 YP_007231555.1 CDS B479_23615 NC_019905.1 5204578 5205300 D COG2099 Precorrin-6x reductase; cobalt-precorrin-6x reductase 5204578..5205300 Pseudomonas putida HB3267 14291103 YP_007231556.1 CDS B479_23620 NC_019905.1 5205433 5205870 D COG1585 Membrane protein implicated in regulation of membrane protease activity; hypothetical protein 5205433..5205870 Pseudomonas putida HB3267 14291104 YP_007231557.1 CDS B479_23625 NC_019905.1 5205897 5206751 D COG0330 Membrane protease subunits, stomatin/prohibitin homologs; hypothetical protein 5205897..5206751 Pseudomonas putida HB3267 14291105 YP_007231558.1 CDS B479_23630 NC_019905.1 5206966 5207355 D hypothetical protein 5206966..5207355 Pseudomonas putida HB3267 14291106 YP_007231559.1 CDS B479_23635 NC_019905.1 5207403 5207888 D COG2847 Uncharacterized protein conserved in bacteria; hypothetical protein 5207403..5207888 Pseudomonas putida HB3267 14291107 YP_007231560.1 CDS B479_23640 NC_019905.1 5207912 5208343 D hypothetical protein 5207912..5208343 Pseudomonas putida HB3267 14291108 YP_007231561.1 CDS B479_23645 NC_019905.1 5208412 5210463 D COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent copper receptor 5208412..5210463 Pseudomonas putida HB3267 14291109 YP_007231562.1 CDS B479_23650 NC_019905.1 5210522 5211889 D COG3182 Uncharacterized iron-regulated membrane protein; peptidase 5210522..5211889 Pseudomonas putida HB3267 14291110 YP_007231563.1 CDS B479_23655 NC_019905.1 5212127 5213533 D COG1113 Gamma-aminobutyrate permease and related permeases; D-alanine/D-serine/glycine permease 5212127..5213533 Pseudomonas putida HB3267 14291111 YP_007231564.1 CDS B479_23660 NC_019905.1 5214022 5215287 D COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component; urea ABC transporter urea binding protein 5214022..5215287 Pseudomonas putida HB3267 14291112 YP_007231565.1 CDS B479_23665 NC_019905.1 5215385 5216914 D COG0559 Branched-chain amino acid ABC-type transport system, permease components; urea ABC transporter permease UrtB 5215385..5216914 Pseudomonas putida HB3267 14291113 YP_007231566.1 CDS B479_23670 NC_019905.1 5216914 5217993 D COG4177 ABC-type branched-chain amino acid transport system, permease component; urea ABC transporter permease UrtC 5216914..5217993 Pseudomonas putida HB3267 14291114 YP_007231567.1 CDS B479_23675 NC_019905.1 5217990 5218847 D COG4674 Uncharacterized ABC-type transport system, ATPase component; branched-chain amino acid ABC transporter ATP-binding protein 5217990..5218847 Pseudomonas putida HB3267 14291115 YP_007231568.1 CDS B479_23680 NC_019905.1 5219006 5219704 D COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; urea ABC transporter ATP-binding protein UrtE 5219006..5219704 Pseudomonas putida HB3267 14291116 YP_007231569.1 CDS B479_23685 NC_019905.1 5219736 5220251 D COG1247 Sortase and related acyltransferases; branched chain amino acid ABC transporter ATP-binding protein 5219736..5220251 Pseudomonas putida HB3267 14291117 YP_007231570.1 CDS B479_23690 NC_019905.1 5220406 5220711 R hypothetical protein complement(5220406..5220711) Pseudomonas putida HB3267 14291118 YP_007231571.1 CDS B479_23695 NC_019905.1 5220714 5221667 R COG2214 DnaJ-class molecular chaperone; chaperone DnaJ domain-containing protein complement(5220714..5221667) Pseudomonas putida HB3267 14291119 YP_007231572.1 CDS B479_23700 NC_019905.1 5221832 5223097 D COG0443 Molecular chaperone; molecular chaperone-like protein 5221832..5223097 Pseudomonas putida HB3267 14291120 YP_007231573.1 CDS B479_23705 NC_019905.1 5223232 5224239 R hypothetical protein complement(5223232..5224239) Pseudomonas putida HB3267 14291121 YP_007231574.1 CDS B479_23710 NC_019905.1 5224311 5224598 R PsiF repeat-containing protein complement(5224311..5224598) Pseudomonas putida HB3267 14291122 YP_007231575.1 CDS B479_23715 NC_019905.1 5224661 5225449 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(5224661..5225449) Pseudomonas putida HB3267 14291123 YP_007231576.1 CDS B479_23720 NC_019905.1 5225664 5226536 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein 5225664..5226536 Pseudomonas putida HB3267 14291124 YP_007231577.1 CDS B479_23725 NC_019905.1 5226533 5227423 R COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(5226533..5227423) Pseudomonas putida HB3267 14291125 YP_007231578.1 CDS B479_23730 NC_019905.1 5227547 5227888 D DNA-binding transcriptional activator OsmE 5227547..5227888 Pseudomonas putida HB3267 14291126 YP_007231579.1 CDS B479_23735 NC_019905.1 5227937 5228467 D COG2193 Bacterioferritin (cytochrome b1); ferritin Dps family protein 5227937..5228467 Pseudomonas putida HB3267 14291127 YP_007231580.1 CDS B479_23740 NC_019905.1 5228597 5230663 R COG2982 Uncharacterized protein involved in outer membrane biogenesis; AsmA family protein complement(5228597..5230663) Pseudomonas putida HB3267 14291128 YP_007231581.1 CDS B479_23745 NC_019905.1 5231005 5231637 D COG0840 Methyl-accepting chemotaxis protein; hypothetical protein 5231005..5231637 Pseudomonas putida HB3267 14291129 YP_007231582.1 CDS B479_23750 NC_019905.1 5231760 5232392 D COG1309 Transcriptional regulator; TetR family transcriptional regulator 5231760..5232392 Pseudomonas putida HB3267 14291130 YP_007231583.1 CDS B479_23755 NC_019905.1 5232486 5233583 D COG2942 N-acyl-D-glucosamine 2-epimerase; N-acylglucosamine 2-epimerase 5232486..5233583 Pseudomonas putida HB3267 14291131 YP_007231584.1 CDS B479_23760 NC_019905.1 5233700 5234467 R COG4221 Short-chain alcohol dehydrogenase of unknown specificity; short-chain dehydrogenase/reductase SDR complement(5233700..5234467) Pseudomonas putida HB3267 14291132 YP_007231585.1 CDS B479_23765 NC_019905.1 5235165 5235881 R COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; Branched chain amino acid ABC transporter ATP-binding protein complement(5235165..5235881) Pseudomonas putida HB3267 14291133 YP_007231586.1 CDS B479_23770 NC_019905.1 5235878 5236753 R COG0411 ABC-type branched-chain amino acid transport systems, ATPase component; Branched chain amino acid ABC transporter ATP-binding protein complement(5235878..5236753) Pseudomonas putida HB3267 14291134 YP_007231587.1 CDS B479_23775 NC_019905.1 5236750 5238051 R COG4177 ABC-type branched-chain amino acid transport system, permease component; inner-membrane translocator complement(5236750..5238051) Pseudomonas putida HB3267 14291135 YP_007231588.1 CDS B479_23780 NC_019905.1 5238054 5238968 R COG0559 Branched-chain amino acid ABC-type transport system, permease components; inner-membrane translocator complement(5238054..5238968) Pseudomonas putida HB3267 14291136 YP_007231589.1 CDS B479_23785 NC_019905.1 5239125 5240261 R COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component; extracellular ligand-binding receptor complement(5239125..5240261) Pseudomonas putida HB3267 14291137 YP_007231590.1 CDS B479_23790 NC_019905.1 5240786 5241991 D COG1488 Nicotinic acid phosphoribosyltransferase; nicotinate phosphoribosyltransferase 5240786..5241991 Pseudomonas putida HB3267 14291138 YP_007231591.1 CDS nadE NC_019905.1 5241995 5242822 D COG0171 NAD synthase; NAD synthetase 5241995..5242822 Pseudomonas putida HB3267 14291139 YP_007231592.1 CDS B479_23800 NC_019905.1 5242903 5243352 R COG3241 Azurin; azurin complement(5242903..5243352) Pseudomonas putida HB3267 14291140 YP_007231593.1 CDS B479_23805 NC_019905.1 5243702 5244289 D COG1611 Predicted Rossmann fold nucleotide-binding protein; hypothetical protein 5243702..5244289 Pseudomonas putida HB3267 14291141 YP_007231594.1 CDS B479_23810 NC_019905.1 5244444 5246744 R COG1032 Fe-S oxidoreductase; hypothetical protein complement(5244444..5246744) Pseudomonas putida HB3267 14291142 YP_007231595.1 CDS B479_23815 NC_019905.1 5246861 5248258 R COG0305 Replicative DNA helicase; replicative DNA helicase complement(5246861..5248258) Pseudomonas putida HB3267 14291143 YP_007231596.1 CDS rplI NC_019905.1 5248372 5248818 R COG0359 Ribosomal protein L9; 50S ribosomal protein L9 complement(5248372..5248818) Pseudomonas putida HB3267 14291144 YP_007231597.1 CDS B479_23825 NC_019905.1 5248839 5249702 R hypothetical protein complement(5248839..5249702) Pseudomonas putida HB3267 14291145 YP_007231598.1 CDS rpsR NC_019905.1 5249736 5249966 R COG0238 Ribosomal protein S18; 30S ribosomal protein S18 complement(5249736..5249966) Pseudomonas putida HB3267 14291146 YP_007231599.1 CDS rpsF NC_019905.1 5249995 5250420 R COG0360 Ribosomal protein S6; 30S ribosomal protein S6 complement(5249995..5250420) Pseudomonas putida HB3267 14291147 YP_007231600.1 CDS B479_23840 NC_019905.1 5250727 5251473 R COG0566 rRNA methylases; RNA methyltransferase complement(5250727..5251473) Pseudomonas putida HB3267 14291148 YP_007231601.1 CDS B479_23845 NC_019905.1 5251470 5254046 R COG0557 Exoribonuclease R; ribonuclease R complement(5251470..5254046) Pseudomonas putida HB3267 14291149 YP_007231602.1 CDS B479_23850 NC_019905.1 5254895 5255908 D COG1840 ABC-type Fe3+ transport system, periplasmic component; iron ABC transporter periplasmic iron-binding protein 5254895..5255908 Pseudomonas putida HB3267 14291771 YP_007231603.1 CDS B479_23855 NC_019905.1 5255908 5257473 D COG1178 ABC-type Fe3+ transport system, permease component; binding-protein-dependent transport system inner membrane protein 5255908..5257473 Pseudomonas putida HB3267 14291151 YP_007231604.1 CDS B479_23860 NC_019905.1 5257524 5258180 R COG0670 Integral membrane protein, interacts with FtsH; hypothetical protein complement(5257524..5258180) Pseudomonas putida HB3267 14291152 YP_007231605.1 CDS B479_23865 NC_019905.1 5258423 5258782 R hypothetical protein complement(5258423..5258782) Pseudomonas putida HB3267 14291153 YP_007231606.1 CDS B479_23870 NC_019905.1 5258849 5259301 R hypothetical protein complement(5258849..5259301) Pseudomonas putida HB3267 14291154 YP_007231607.1 CDS B479_23875 NC_019905.1 5259311 5259850 R COG3157 Hemolysin-coregulated protein (uncharacterized); Hcp1 family type VI secretion system effector complement(5259311..5259850) Pseudomonas putida HB3267 14291155 YP_007231608.1 CDS B479_23880 NC_019905.1 5260124 5260384 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis transducer complement(5260124..5260384) Pseudomonas putida HB3267 14291156 YP_007231609.1 CDS B479_23885 NC_019905.1 5260391 5260768 R hypothetical protein complement(5260391..5260768) Pseudomonas putida HB3267 14291157 YP_007231610.1 CDS B479_23890 NC_019905.1 5260765 5261739 R hypothetical protein complement(5260765..5261739) Pseudomonas putida HB3267 14291158 YP_007231611.1 CDS B479_23895 NC_019905.1 5261749 5262237 R COG3157 Hemolysin-coregulated protein (uncharacterized); Hcp1 family type VI secretion system effector complement(5261749..5262237) Pseudomonas putida HB3267 14291159 YP_007231612.1 CDS B479_23900 NC_019905.1 5262469 5262960 R hypothetical protein complement(5262469..5262960) Pseudomonas putida HB3267 14291160 YP_007231613.1 CDS B479_23905 NC_019905.1 5263137 5265071 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(5263137..5265071) Pseudomonas putida HB3267 14291161 YP_007231614.1 CDS B479_23910 NC_019905.1 5265367 5266659 R COG0104 Adenylosuccinate synthase; adenylosuccinate synthetase complement(5265367..5266659) Pseudomonas putida HB3267 14291162 YP_007231615.1 CDS hisZ NC_019905.1 5266716 5267903 R COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis; ATP phosphoribosyltransferase regulatory subunit complement(5266716..5267903) Pseudomonas putida HB3267 14291163 YP_007231616.1 CDS B479_23920 NC_019905.1 5268206 5269075 R COG0330 Membrane protease subunits, stomatin/prohibitin homologs; HflC protein complement(5268206..5269075) Pseudomonas putida HB3267 14291164 YP_007231617.1 CDS B479_23925 NC_019905.1 5269075 5270256 R COG0330 Membrane protease subunits, stomatin/prohibitin homologs; HflK protein complement(5269075..5270256) Pseudomonas putida HB3267 14291165 YP_007231618.1 CDS B479_23930 NC_019905.1 5270353 5271654 R COG2262 GTPases; GTP-binding protein HflX complement(5270353..5271654) Pseudomonas putida HB3267 14291166 YP_007231619.1 CDS hfq NC_019905.1 5271667 5271927 R COG1923 Uncharacterized host factor I protein; RNA-binding protein Hfq complement(5271667..5271927) Pseudomonas putida HB3267 14291167 YP_007231620.1 CDS miaA NC_019905.1 5272022 5272993 R COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA delta(2)-isopentenylpyrophosphate transferase complement(5272022..5272993) Pseudomonas putida HB3267 14291168 YP_007231621.1 CDS mutL NC_019905.1 5272995 5274890 R COG0323 DNA mismatch repair enzyme (predicted ATPase); DNA mismatch repair protein complement(5272995..5274890) Pseudomonas putida HB3267 14291169 YP_007231622.1 CDS B479_23950 NC_019905.1 5274887 5276317 R COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase complement(5274887..5276317) Pseudomonas putida HB3267 14291170 YP_007231623.1 CDS B479_23955 NC_019905.1 5276329 5276802 R COG0802 Predicted ATPase or kinase; hypothetical protein complement(5276329..5276802) Pseudomonas putida HB3267 14291171 YP_007231624.1 CDS B479_23960 NC_019905.1 5276790 5277650 R COG0063 Predicted sugar kinase; carbohydrate kinase YjeF-like protein complement(5276790..5277650) Pseudomonas putida HB3267 14291172 YP_007231625.1 CDS B479_23965 NC_019905.1 5277716 5278780 D COG1600 Uncharacterized Fe-S protein; iron-sulfur cluster binding protein 5277716..5278780 Pseudomonas putida HB3267 14291173 YP_007231626.1 CDS B479_23970 NC_019905.1 5278895 5279506 R COG2860 Predicted membrane protein; hypothetical protein complement(5278895..5279506) Pseudomonas putida HB3267 14291174 YP_007231627.1 CDS B479_23975 NC_019905.1 5279607 5280149 R COG1949 Oligoribonuclease (3'->5' exoribonuclease); oligoribonuclease complement(5279607..5280149) Pseudomonas putida HB3267 14291175 YP_007231628.1 CDS B479_23980 NC_019905.1 5280293 5281324 D COG1162 Predicted GTPases; GTPase RsgA 5280293..5281324 Pseudomonas putida HB3267 14291176 YP_007231629.1 CDS motB NC_019905.1 5281505 5282518 R COG1360 Flagellar motor protein; flagellar motor protein MotB complement(5281505..5282518) Pseudomonas putida HB3267 14291177 YP_007231630.1 CDS B479_23990 NC_019905.1 5282522 5283373 R COG1291 Flagellar motor component; flagellar motor protein MotA complement(5282522..5283373) Pseudomonas putida HB3267 14291178 YP_007231631.1 CDS B479_23995 NC_019905.1 5283504 5285039 D metal-dependent hydrolase HDOD 5283504..5285039 Pseudomonas putida HB3267 14291179 YP_007231632.1 CDS B479_24000 NC_019905.1 5285084 5285893 D COG2897 Rhodanese-related sulfurtransferase; rhodanese domain-containing protein 5285084..5285893 Pseudomonas putida HB3267 14291180 YP_007231633.1 CDS psd NC_019905.1 5285903 5286766 D COG0688 Phosphatidylserine decarboxylase; phosphatidylserine decarboxylase 5285903..5286766 Pseudomonas putida HB3267 14291181 YP_007231634.1 CDS B479_24010 NC_019905.1 5286899 5288113 R COG3830 ACT domain-containing protein; phosphoserine phosphatase SerB complement(5286899..5288113) Pseudomonas putida HB3267 14291182 YP_007231635.1 CDS B479_24015 NC_019905.1 5288249 5289703 D HAMP domain-containing protein 5288249..5289703 Pseudomonas putida HB3267 14291183 YP_007231636.1 CDS B479_24020 NC_019905.1 5289863 5290576 R COG3009 Uncharacterized protein conserved in bacteria; hypothetical protein complement(5289863..5290576) Pseudomonas putida HB3267 14291184 YP_007231637.1 CDS B479_24025 NC_019905.1 5290746 5293004 R COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA topoisomerase IV subunit A complement(5290746..5293004) Pseudomonas putida HB3267 14291185 YP_007231638.1 CDS B479_24030 NC_019905.1 5293015 5293533 R COG3577 Predicted aspartyl protease; hypothetical protein complement(5293015..5293533) Pseudomonas putida HB3267 14291186 YP_007231639.1 CDS B479_24035 NC_019905.1 5293530 5294516 R hypothetical protein complement(5293530..5294516) Pseudomonas putida HB3267 14291187 YP_007231640.1 CDS B479_24040 NC_019905.1 5294513 5296417 R COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA topoisomerase IV subunit B complement(5294513..5296417) Pseudomonas putida HB3267 14291188 YP_007231641.1 CDS B479_24045 NC_019905.1 5296453 5297061 R COG3150 Predicted esterase; hypothetical protein complement(5296453..5297061) Pseudomonas putida HB3267 14291189 YP_007231642.1 CDS B479_24050 NC_019905.1 5297233 5298033 R COG1409 Predicted phosphohydrolases; Icc protein complement(5297233..5298033) Pseudomonas putida HB3267 14291190 YP_007231643.1 CDS B479_24055 NC_019905.1 5298119 5298565 R COG3151 Uncharacterized protein conserved in bacteria; hypothetical protein complement(5298119..5298565) Pseudomonas putida HB3267 14291191 YP_007231644.1 CDS nudF NC_019905.1 5298562 5299179 R COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; ADP-ribose pyrophosphatase NudF complement(5298562..5299179) Pseudomonas putida HB3267 14291192 YP_007231645.1 CDS B479_24065 NC_019905.1 5299365 5300111 D Putative lipoprotein 5299365..5300111 Pseudomonas putida HB3267 14291193 YP_007231646.1 CDS B479_24070 NC_019905.1 5300080 5301363 R COG1457 Purine-cytosine permease and related proteins; hydroxymethylpyrimidine transporter CytX complement(5300080..5301363) Pseudomonas putida HB3267 14291194 YP_007231647.1 CDS B479_24075 NC_019905.1 5301537 5303417 R COG0422 Thiamine biosynthesis protein ThiC; phosphomethylpyrimidine synthase ThiC complement(5301537..5303417) Pseudomonas putida HB3267 14291195 YP_007231648.1 CDS B479_24080 NC_019905.1 5303838 5305274 D COG1538 Outer membrane protein; TolC family type I secretion outer membrane protein 5303838..5305274 Pseudomonas putida HB3267 14291196 YP_007231649.1 CDS B479_24085 NC_019905.1 5305428 5306699 R COG1519 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase complement(5305428..5306699) Pseudomonas putida HB3267 14291197 YP_007231650.1 CDS B479_24090 NC_019905.1 5306711 5307601 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(5306711..5307601) Pseudomonas putida HB3267 14291198 YP_007231651.1 CDS B479_24095 NC_019905.1 5307689 5308021 D COG2076 Membrane transporters of cations and cationic drugs; Small multidrug resistance protein 5307689..5308021 Pseudomonas putida HB3267 14291199 YP_007231652.1 CDS B479_24100 NC_019905.1 5308221 5309396 D COG0578 Glycerol-3-phosphate dehydrogenase; FAD dependent oxidoreductase 5308221..5309396 Pseudomonas putida HB3267 14291200 YP_007231653.1 CDS B479_24105 NC_019905.1 5309393 5310205 D COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); aldo/keto reductase 5309393..5310205 Pseudomonas putida HB3267 14291201 YP_007231654.1 CDS B479_24110 NC_019905.1 5310256 5311224 D hypothetical protein 5310256..5311224 Pseudomonas putida HB3267 14291202 YP_007231655.1 CDS B479_24115 NC_019905.1 5311367 5312788 R COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase complement(5311367..5312788) Pseudomonas putida HB3267 14291203 YP_007231656.1 CDS B479_24120 NC_019905.1 5312919 5314727 R COG1132 ABC-type multidrug transport system, ATPase and permease components; lipid A ABC exporter, fused ATPase, and inner membrane MsbA subunits complement(5312919..5314727) Pseudomonas putida HB3267 14291204 YP_007231657.1 CDS B479_24125 NC_019905.1 5314743 5315918 R COG3307 Lipid A core - O-antigen ligase and related enzymes; O-antigen polymerase complement(5314743..5315918) Pseudomonas putida HB3267 14291205 YP_007231658.1 CDS B479_24130 NC_019905.1 5316020 5316625 D COG0515 Serine/threonine protein kinase; toluene tolerance protein Ttg8 5316020..5316625 Pseudomonas putida HB3267 14291206 YP_007231659.1 CDS B479_24135 NC_019905.1 5316629 5317720 R COG0438 Glycosyltransferase; group 1 glycosyl transferase complement(5316629..5317720) Pseudomonas putida HB3267 14291207 YP_007231660.1 CDS B479_24140 NC_019905.1 5317758 5318495 R COG0220 Predicted S-adenosylmethionine-dependent methyltransferase; hypothetical protein complement(5317758..5318495) Pseudomonas putida HB3267 14291208 YP_007231661.1 CDS B479_24145 NC_019905.1 5318597 5319553 R COG0438 Glycosyltransferase; hypothetical protein complement(5318597..5319553) Pseudomonas putida HB3267 14291209 YP_007231662.1 CDS B479_24150 NC_019905.1 5319602 5321005 R COG2120 Uncharacterized proteins, LmbE homologs; LmbE family protein complement(5319602..5321005) Pseudomonas putida HB3267 14291210 YP_007231663.1 CDS B479_24155 NC_019905.1 5321002 5321898 R Mig-14 family protein complement(5321002..5321898) Pseudomonas putida HB3267 14291211 YP_007231664.1 CDS B479_24160 NC_019905.1 5321898 5323028 R COG0438 Glycosyltransferase; group 1 glycosyl transferase complement(5321898..5323028) Pseudomonas putida HB3267 14291212 YP_007231665.1 CDS B479_24165 NC_019905.1 5323012 5324769 R COG2192 Predicted carbamoyl transferase, NodU family; carbamoyltransferase complement(5323012..5324769) Pseudomonas putida HB3267 14291213 YP_007231666.1 CDS B479_24170 NC_019905.1 5324990 5325826 R COG2961 Protein involved in catabolism of external DNA; hypothetical protein complement(5324990..5325826) Pseudomonas putida HB3267 14291214 YP_007231667.1 CDS B479_24175 NC_019905.1 5326013 5327491 R COG0591 Na+/proline symporter; sodium/proline symporter complement(5326013..5327491) Pseudomonas putida HB3267 14291215 YP_007231668.1 CDS putA NC_019905.1 5327849 5331802 D COG0506 Proline dehydrogenase; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 5327849..5331802 Pseudomonas putida HB3267 14291216 YP_007231669.1 CDS B479_24185 NC_019905.1 5331905 5332198 R hypothetical protein complement(5331905..5332198) Pseudomonas putida HB3267 14291217 YP_007231670.1 CDS B479_24190 NC_019905.1 5332425 5332862 R hypothetical protein complement(5332425..5332862) Pseudomonas putida HB3267 14291218 YP_007231671.1 CDS B479_24195 NC_019905.1 5332968 5333531 R hypothetical protein complement(5332968..5333531) Pseudomonas putida HB3267 14291219 YP_007231672.1 CDS B479_24200 NC_019905.1 5333905 5335707 D COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase 5333905..5335707 Pseudomonas putida HB3267 14291220 YP_007231673.1 CDS B479_24205 NC_019905.1 5335740 5337182 D COG0312 Predicted Zn-dependent proteases and their inactivated homologs; peptidase U62 modulator of DNA gyrase 5335740..5337182 Pseudomonas putida HB3267 14291221 YP_007231674.1 CDS B479_24210 NC_019905.1 5337182 5338501 D COG0312 Predicted Zn-dependent proteases and their inactivated homologs; hypothetical protein 5337182..5338501 Pseudomonas putida HB3267 14291222 YP_007231675.1 CDS B479_24215 NC_019905.1 5338629 5340056 D COG0477 Permeases of the major facilitator superfamily; EmrB/QacA family drug resistance transporter 5338629..5340056 Pseudomonas putida HB3267 14291223 YP_007231676.1 CDS B479_24220 NC_019905.1 5340121 5341506 D COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase DbpA 5340121..5341506 Pseudomonas putida HB3267 14291224 YP_007231677.1 CDS B479_24225 NC_019905.1 5341644 5342825 D COG2081 Predicted flavoproteins; hypothetical protein 5341644..5342825 Pseudomonas putida HB3267 14291225 YP_007231678.1 CDS B479_24230 NC_019905.1 5343047 5345230 D COG1289 Predicted membrane protein; YccS/YhfK family integral membrane protein 5343047..5345230 Pseudomonas putida HB3267 14291226 YP_007231679.1 CDS B479_24235 NC_019905.1 5345362 5346063 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter periplasmic amino acid-binding protein complement(5345362..5346063) Pseudomonas putida HB3267 14291227 YP_007231680.1 CDS B479_24240 NC_019905.1 5346255 5346707 D COG2153 Predicted acyltransferase; acetyltransferase 5346255..5346707 Pseudomonas putida HB3267 14291228 YP_007231681.1 CDS B479_24245 NC_019905.1 5346797 5347093 R COG4519 Uncharacterized protein conserved in bacteria; hypothetical protein complement(5346797..5347093) Pseudomonas putida HB3267 14291229 YP_007231682.1 CDS B479_24250 NC_019905.1 5347106 5347606 R COG1451 Predicted metal-dependent hydrolase; hypothetical protein complement(5347106..5347606) Pseudomonas putida HB3267 14291230 YP_007231683.1 CDS B479_24255 NC_019905.1 5347646 5349772 R COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) complement(5347646..5349772) Pseudomonas putida HB3267 14291231 YP_007231684.1 CDS B479_24260 NC_019905.1 5350016 5351080 R COG0191 Fructose/tagatose bisphosphate aldolase; fructose-1,6-bisphosphate aldolase complement(5350016..5351080) Pseudomonas putida HB3267 14291232 YP_007231685.1 CDS B479_24265 NC_019905.1 5351181 5351510 R lipoprotein complement(5351181..5351510) Pseudomonas putida HB3267 14291233 YP_007231686.1 CDS B479_24270 NC_019905.1 5351574 5351825 R hypothetical protein complement(5351574..5351825) Pseudomonas putida HB3267 14291234 YP_007231687.1 CDS pgk NC_019905.1 5351825 5352988 R COG0126 3-phosphoglycerate kinase; phosphoglycerate kinase complement(5351825..5352988) Pseudomonas putida HB3267 14291235 YP_007231688.1 CDS B479_24280 NC_019905.1 5353001 5354062 R COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; D-erythrose-4-phosphate dehydrogenase complement(5353001..5354062) Pseudomonas putida HB3267 14291236 YP_007231689.1 CDS B479_24285 NC_019905.1 5354213 5356210 R COG0021 Transketolase; transketolase complement(5354213..5356210) Pseudomonas putida HB3267 14291237 YP_007231690.1 CDS B479_24290 NC_019905.1 5356439 5357431 D COG0640 Predicted transcriptional regulators; ArsR family transcriptional regulator 5356439..5357431 Pseudomonas putida HB3267 14291238 YP_007231691.1 CDS B479_24295 NC_019905.1 5357450 5358640 D COG0192 S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 5357450..5358640 Pseudomonas putida HB3267 14291239 YP_007231692.1 CDS ligB NC_019905.1 5358786 5360486 D COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase LigB 5358786..5360486 Pseudomonas putida HB3267 14291240 YP_007231693.1 CDS B479_24305 NC_019905.1 5360619 5361011 D hypothetical protein 5360619..5361011 Pseudomonas putida HB3267 14291241 YP_007231694.1 CDS B479_24310 NC_019905.1 5361169 5361615 R COG3909 Cytochrome c556; cytochrome c class II complement(5361169..5361615) Pseudomonas putida HB3267 14291242 YP_007231695.1 CDS B479_24315 NC_019905.1 5361734 5362885 D COG2821 Membrane-bound lytic murein transglycosylase; MltA domain-containing protein 5361734..5362885 Pseudomonas putida HB3267 14291243 YP_007231696.1 CDS B479_24320 NC_019905.1 5362935 5363321 R COG3686 Predicted membrane protein; hypothetical protein complement(5362935..5363321) Pseudomonas putida HB3267 14291244 YP_007231697.1 CDS B479_24325 NC_019905.1 5363350 5364183 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein complement(5363350..5364183) Pseudomonas putida HB3267 14291245 YP_007231698.1 CDS B479_24330 NC_019905.1 5364538 5365353 D hypothetical protein 5364538..5365353 Pseudomonas putida HB3267 14291246 YP_007231699.1 CDS B479_24335 NC_019905.1 5365496 5366731 D COG0025 NhaP-type Na+/H+ and K+/H+ antiporters; sodium/hydrogen exchanger 5365496..5366731 Pseudomonas putida HB3267 14291247 YP_007231700.1 CDS B479_24340 NC_019905.1 5366765 5367166 R COG1607 Acyl-CoA hydrolase; thioesterase superfamily protein complement(5366765..5367166) Pseudomonas putida HB3267 14291248 YP_007231701.1 CDS B479_24345 NC_019905.1 5367462 5368871 D COG0499 S-adenosylhomocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase 5367462..5368871 Pseudomonas putida HB3267 14291249 YP_007231702.1 CDS B479_24350 NC_019905.1 5369038 5369883 D COG0685 5,10-methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 5369038..5369883 Pseudomonas putida HB3267 14291250 YP_007231703.1 CDS B479_24355 NC_019905.1 5369976 5371046 D hypothetical protein 5369976..5371046 Pseudomonas putida HB3267 14291251 YP_007231704.1 CDS B479_24360 NC_019905.1 5371213 5372001 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; extracellular solute-binding protein 5371213..5372001 Pseudomonas putida HB3267 14291252 YP_007231705.1 CDS B479_24365 NC_019905.1 5372221 5374104 D COG0513 Superfamily II DNA and RNA helicases; DEAD/DEAH box helicase 5372221..5374104 Pseudomonas putida HB3267 14291253 YP_007231706.1 CDS B479_24370 NC_019905.1 5374244 5374819 R COG2353 Uncharacterized conserved protein; hypothetical protein complement(5374244..5374819) Pseudomonas putida HB3267 14291254 YP_007231707.1 CDS B479_24375 NC_019905.1 5374857 5375408 R COG3038 Cytochrome B561; cytochrome B561 complement(5374857..5375408) Pseudomonas putida HB3267 14291255 YP_007231708.1 CDS B479_24380 NC_019905.1 5375663 5377516 R COG1231 Monoamine oxidase; amine oxidase complement(5375663..5377516) Pseudomonas putida HB3267 14291256 YP_007231709.1 CDS B479_24385 NC_019905.1 5377782 5379188 D COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine--8-amino-7-oxononanoate transaminase 5377782..5379188 Pseudomonas putida HB3267 14291257 YP_007231710.1 CDS B479_24390 NC_019905.1 5379318 5380037 D COG1385 Uncharacterized protein conserved in bacteria; 16S ribosomal RNA methyltransferase RsmE 5379318..5380037 Pseudomonas putida HB3267 14291258 YP_007231711.1 CDS B479_24395 NC_019905.1 5380038 5380655 R COG1272 Predicted membrane protein, hemolysin III homolog; hemolysin III family channel protein complement(5380038..5380655) Pseudomonas putida HB3267 14291259 YP_007231712.1 CDS B479_24400 NC_019905.1 5380812 5381285 R COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; CheW domain-containing protein complement(5380812..5381285) Pseudomonas putida HB3267 14291260 YP_007231713.1 CDS B479_24405 NC_019905.1 5381278 5386230 R COG0643 Chemotaxis protein histidine kinase and related kinases; CheA signal transduction histidine kinase complement(5381278..5386230) Pseudomonas putida HB3267 14291261 YP_007231714.1 CDS B479_24410 NC_019905.1 5386279 5388333 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(5386279..5388333) Pseudomonas putida HB3267 14291262 YP_007231715.1 CDS B479_24415 NC_019905.1 5388345 5388899 R COG0835 Chemotaxis signal transduction protein; CheW protein complement(5388345..5388899) Pseudomonas putida HB3267 14291263 YP_007231716.1 CDS B479_24420 NC_019905.1 5388896 5389261 R COG0784 FOG: CheY-like receiver; response regulator receiver protein complement(5388896..5389261) Pseudomonas putida HB3267 14291264 YP_007231717.1 CDS B479_24425 NC_019905.1 5389309 5389710 R COG0784 FOG: CheY-like receiver; response regulator receiver protein complement(5389309..5389710) Pseudomonas putida HB3267 14291265 YP_007231718.1 CDS B479_24430 NC_019905.1 5389923 5390876 D COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); glutathione synthetase 5389923..5390876 Pseudomonas putida HB3267 14291266 YP_007231719.1 CDS B479_24435 NC_019905.1 5390968 5391873 D COG0810 Periplasmic protein TonB, links inner and outer membranes; TonB family protein 5390968..5391873 Pseudomonas putida HB3267 14291267 YP_007231720.1 CDS B479_24440 NC_019905.1 5392052 5392621 D COG1678 Putative transcriptional regulator; hypothetical protein 5392052..5392621 Pseudomonas putida HB3267 14291268 YP_007231721.1 CDS B479_24445 NC_019905.1 5392621 5393058 D COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); Holliday junction resolvase-like protein 5392621..5393058 Pseudomonas putida HB3267 14291269 YP_007231722.1 CDS B479_24450 NC_019905.1 5393108 5393626 D COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 5393108..5393626 Pseudomonas putida HB3267 14291270 YP_007231723.1 CDS pyrB NC_019905.1 5393639 5394643 D COG0540 Aspartate carbamoyltransferase, catalytic chain; aspartate carbamoyltransferase catalytic subunit 5393639..5394643 Pseudomonas putida HB3267 14291271 YP_007231724.1 CDS pyrC NC_019905.1 5394640 5395911 D COG0044 Dihydroorotase and related cyclic amidohydrolases; dihydroorotase 5394640..5395911 Pseudomonas putida HB3267 14291272 YP_007231725.1 CDS B479_24465 NC_019905.1 5396125 5396655 D COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit; ATP-dependent protease subunit HslV 5396125..5396655 Pseudomonas putida HB3267 14291273 YP_007231726.1 CDS hslU NC_019905.1 5396732 5398075 D COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit; ATP-dependent protease ATP-binding subunit HslU 5396732..5398075 Pseudomonas putida HB3267 14291274 YP_007231727.1 CDS B479_24475 NC_019905.1 5398246 5398623 D COG3536 Uncharacterized protein conserved in bacteria; hypothetical protein 5398246..5398623 Pseudomonas putida HB3267 14291275 YP_007231728.1 CDS B479_24480 NC_019905.1 5398893 5400572 D COG3243 Poly(3-hydroxyalkanoate) synthetase; poly(R)-hydroxyalkanoic acid synthase, class II 5398893..5400572 Pseudomonas putida HB3267 14291276 YP_007231729.1 CDS B479_24485 NC_019905.1 5400636 5401487 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); poly(3-hydroxyalkanoate) depolymerase 5400636..5401487 Pseudomonas putida HB3267 14291277 YP_007231730.1 CDS B479_24490 NC_019905.1 5401540 5403222 D COG3243 Poly(3-hydroxyalkanoate) synthetase; poly(3-hydroxyalkanoic acid) synthase 2 5401540..5403222 Pseudomonas putida HB3267 14291278 YP_007231731.1 CDS B479_24495 NC_019905.1 5403236 5403850 D COG1309 Transcriptional regulator; TetR family transcriptional regulator 5403236..5403850 Pseudomonas putida HB3267 14291279 YP_007231732.1 CDS B479_24500 NC_019905.1 5403981 5404751 R poly(hydroxyalkanoate) granule-associated protein complement(5403981..5404751) Pseudomonas putida HB3267 14291280 YP_007231733.1 CDS B479_24505 NC_019905.1 5404762 5405181 R COG3937 Uncharacterized conserved protein; poly(hydroxyalcanoate) granule associated protein GA1 complement(5404762..5405181) Pseudomonas putida HB3267 14291281 YP_007231734.1 CDS B479_24510 NC_019905.1 5405305 5405580 R hypothetical protein complement(5405305..5405580) Pseudomonas putida HB3267 14291282 YP_007231735.1 CDS ubiE NC_019905.1 5405705 5406475 D COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; ubiquinone/menaquinone biosynthesis methyltransferase 5405705..5406475 Pseudomonas putida HB3267 14291283 YP_007231736.1 CDS B479_24520 NC_019905.1 5406475 5407098 D COG3165 Uncharacterized protein conserved in bacteria; sterol-binding domain-containing protein 5406475..5407098 Pseudomonas putida HB3267 14291284 YP_007231737.1 CDS B479_24525 NC_019905.1 5407095 5408714 D COG0661 Predicted unusual protein kinase; 2-polyprenylphenol 6-hydroxylase 5407095..5408714 Pseudomonas putida HB3267 14291285 YP_007231738.1 CDS hisI NC_019905.1 5408787 5409179 D COG0139 Phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 5408787..5409179 Pseudomonas putida HB3267 14291286 YP_007231739.1 CDS hisE NC_019905.1 5409181 5409516 D COG0140 Phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphatase 5409181..5409516 Pseudomonas putida HB3267 14291287 YP_007231740.1 CDS tatA NC_019905.1 5409670 5409942 D COG1826 Sec-independent protein secretion pathway components; twin arginine translocase protein A 5409670..5409942 Pseudomonas putida HB3267 14291288 YP_007231741.1 CDS tatB NC_019905.1 5409946 5410323 D COG1826 Sec-independent protein secretion pathway components; sec-independent translocase 5409946..5410323 Pseudomonas putida HB3267 14291289 YP_007231742.1 CDS B479_24550 NC_019905.1 5410320 5411108 D COG0805 Sec-independent protein secretion pathway component TatC; sec-independent protein translocase, TatC subunit 5410320..5411108 Pseudomonas putida HB3267 14291290 YP_007231743.1 CDS B479_24555 NC_019905.1 5411105 5411812 D COG1385 Uncharacterized protein conserved in bacteria; 16S ribosomal RNA methyltransferase RsmE 5411105..5411812 Pseudomonas putida HB3267 14291291 YP_007231744.1 CDS B479_24560 NC_019905.1 5411913 5413829 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 5411913..5413829 Pseudomonas putida HB3267 14291292 YP_007231745.1 CDS B479_24565 NC_019905.1 5414093 5416036 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 5414093..5416036 Pseudomonas putida HB3267 14291293 YP_007231746.1 CDS B479_24570 NC_019905.1 5416171 5416905 R COG1126 ABC-type polar amino acid transport system, ATPase component; amino acid ABC transporter ATP-binding protein complement(5416171..5416905) Pseudomonas putida HB3267 14291294 YP_007231747.1 CDS B479_24575 NC_019905.1 5416898 5417860 R COG0765 ABC-type amino acid transport system, permease component; polar amino acid ABC transporter inner membrane subunit complement(5416898..5417860) Pseudomonas putida HB3267 14291295 YP_007231748.1 CDS B479_24580 NC_019905.1 5417939 5418739 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter periplasmic amino acid-binding protein complement(5417939..5418739) Pseudomonas putida HB3267 14291296 YP_007231749.1 CDS B479_24585 NC_019905.1 5419012 5421585 R COG2943 Membrane glycosyltransferase; glucosyltransferase MdoH complement(5419012..5421585) Pseudomonas putida HB3267 14291297 YP_007231750.1 CDS mdoG NC_019905.1 5421578 5423299 R COG3131 Periplasmic glucans biosynthesis protein; glucan biosynthesis protein G complement(5421578..5423299) Pseudomonas putida HB3267 14291298 YP_007231751.1 CDS B479_24595 NC_019905.1 5423563 5424000 R COG1490 D-Tyr-tRNAtyr deacylase; D-tyrosyl-tRNA(Tyr) deacylase complement(5423563..5424000) Pseudomonas putida HB3267 14291299 YP_007231752.1 CDS B479_24600 NC_019905.1 5423997 5424968 R COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); proline iminopeptidase complement(5423997..5424968) Pseudomonas putida HB3267 14291300 YP_007231753.1 CDS B479_24605 NC_019905.1 5425241 5430664 D COG4886 Leucine-rich repeat (LRR) protein; hypothetical protein 5425241..5430664 Pseudomonas putida HB3267 14291301 YP_007231754.1 CDS B479_24610 NC_019905.1 5430724 5431527 R COG3741 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase complement(5430724..5431527) Pseudomonas putida HB3267 14291302 YP_007231755.1 CDS B479_24615 NC_019905.1 5431538 5432743 R COG1228 Imidazolonepropionase and related amidohydrolases; imidazolonepropionase complement(5431538..5432743) Pseudomonas putida HB3267 14291303 YP_007231756.1 CDS B479_24620 NC_019905.1 5432760 5434163 R COG1113 Gamma-aminobutyrate permease and related permeases; amino acid ABC transporter permease complement(5432760..5434163) Pseudomonas putida HB3267 14291304 YP_007231757.1 CDS B479_24625 NC_019905.1 5434321 5435853 R COG2986 Histidine ammonia-lyase; histidine ammonia-lyase complement(5434321..5435853) Pseudomonas putida HB3267 14291305 YP_007231758.1 CDS B479_24630 NC_019905.1 5435961 5437634 R COG2987 Urocanate hydratase; urocanate hydratase complement(5435961..5437634) Pseudomonas putida HB3267 14291306 YP_007231759.1 CDS B479_24635 NC_019905.1 5437890 5438462 R COG3758 Uncharacterized protein conserved in bacteria; hypothetical protein complement(5437890..5438462) Pseudomonas putida HB3267 14291307 YP_007231760.1 CDS B479_24640 NC_019905.1 5438459 5439205 R COG2188 Transcriptional regulators; histidine utilization repressor complement(5438459..5439205) Pseudomonas putida HB3267 14291308 YP_007231761.1 CDS B479_24645 NC_019905.1 5439315 5440679 D COG0402 Cytosine deaminase and related metal-dependent hydrolases; N-formimino-L-glutamate deiminase 5439315..5440679 Pseudomonas putida HB3267 14291309 YP_007231762.1 CDS B479_24650 NC_019905.1 5440796 5441347 R COG3040 Bacterial lipocalin; lipocalin family protein complement(5440796..5441347) Pseudomonas putida HB3267 14291310 YP_007231763.1 CDS B479_24655 NC_019905.1 5441365 5441619 R hypothetical protein complement(5441365..5441619) Pseudomonas putida HB3267 14291311 YP_007231764.1 CDS B479_24660 NC_019905.1 5441915 5442511 R COG3803 Uncharacterized protein conserved in bacteria; hypothetical protein complement(5441915..5442511) Pseudomonas putida HB3267 14291312 YP_007231765.1 CDS B479_24665 NC_019905.1 5442515 5443525 R COG0158 Fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase complement(5442515..5443525) Pseudomonas putida HB3267 14291313 YP_007231766.1 CDS B479_24670 NC_019905.1 5443781 5446231 R COG0058 Glucan phosphorylase; glycogen phosphorylase complement(5443781..5446231) Pseudomonas putida HB3267 14291314 YP_007231767.1 CDS B479_24675 NC_019905.1 5446416 5446820 D COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein 5446416..5446820 Pseudomonas putida HB3267 14291315 YP_007231768.1 CDS B479_24680 NC_019905.1 5447056 5448480 R COG4287 PhoPQ-activated pathogenicity-related protein; hypothetical protein complement(5447056..5448480) Pseudomonas putida HB3267 14291316 YP_007231769.1 CDS B479_24685 NC_019905.1 5448690 5449238 R hypothetical protein complement(5448690..5449238) Pseudomonas putida HB3267 14291317 YP_007231770.1 CDS B479_24690 NC_019905.1 5449283 5450083 R hypothetical protein complement(5449283..5450083) Pseudomonas putida HB3267 14291318 YP_007231771.1 CDS B479_24695 NC_019905.1 5450090 5450302 R hypothetical protein complement(5450090..5450302) Pseudomonas putida HB3267 14291319 YP_007231772.1 CDS B479_24700 NC_019905.1 5451027 5452847 R COG1217 Predicted membrane GTPase involved in stress response; GTP-binding protein TypA complement(5451027..5452847) Pseudomonas putida HB3267 14291320 YP_007231773.1 CDS B479_24705 NC_019905.1 5452975 5454429 R COG0301 Thiamine biosynthesis ATP pyrophosphatase; tRNA s(4)U8 sulfurtransferase complement(5452975..5454429) Pseudomonas putida HB3267 14291321 YP_007231774.1 CDS B479_24710 NC_019905.1 5454899 5456305 D COG0174 Glutamine synthetase; glutamine synthetase 5454899..5456305 Pseudomonas putida HB3267 14291322 YP_007231775.1 CDS B479_24715 NC_019905.1 5456480 5456923 D COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain; chorismate mutase 5456480..5456923 Pseudomonas putida HB3267 14291323 YP_007231776.1 CDS B479_24720 NC_019905.1 5457196 5458281 D COG3852 Signal transduction histidine kinase, nitrogen specific; signal transduction histidine kinase, nitrogen specific, NtrB 5457196..5458281 Pseudomonas putida HB3267 14291324 YP_007231777.1 CDS B479_24725 NC_019905.1 5458278 5459714 D COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; nitrogen metabolism transcriptional regulator NtrC 5458278..5459714 Pseudomonas putida HB3267 14291325 YP_007231778.1 CDS B479_24730 NC_019905.1 5460155 5460592 R hypothetical protein complement(5460155..5460592) Pseudomonas putida HB3267 14291326 YP_007231779.1 CDS B479_24735 NC_019905.1 5460591 5461052 D COG0219 Predicted rRNA methylase (SpoU class); RNA methyltransferase 5460591..5461052 Pseudomonas putida HB3267 14291327 YP_007231780.1 CDS B479_24740 NC_019905.1 5461215 5461700 R COG1952 Preprotein translocase subunit SecB; preprotein translocase subunit SecB complement(5461215..5461700) Pseudomonas putida HB3267 14291328 YP_007231781.1 CDS B479_24745 NC_019905.1 5461740 5461994 R COG0695 Glutaredoxin and related proteins; glutaredoxin 3 complement(5461740..5461994) Pseudomonas putida HB3267 14291329 YP_007231782.1 CDS B479_24750 NC_019905.1 5461996 5462409 R COG0607 Rhodanese-related sulfurtransferase; rhodanese domain-containing protein complement(5461996..5462409) Pseudomonas putida HB3267 14291330 YP_007231783.1 CDS B479_24755 NC_019905.1 5462616 5464151 D COG0696 Phosphoglyceromutase; phosphoglyceromutase 5462616..5464151 Pseudomonas putida HB3267 14291331 YP_007231784.1 CDS B479_24760 NC_019905.1 5464383 5465687 D COG4942 Membrane-bound metallopeptidase; peptidase M23B 5464383..5465687 Pseudomonas putida HB3267 14291332 YP_007231785.1 CDS B479_24765 NC_019905.1 5465766 5467082 D COG0793 Periplasmic protease; carboxyl-terminal protease 5465766..5467082 Pseudomonas putida HB3267 14291333 YP_007231786.1 CDS B479_24770 NC_019905.1 5467091 5467879 D COG2861 Uncharacterized protein conserved in bacteria; hypothetical protein 5467091..5467879 Pseudomonas putida HB3267 14291334 YP_007231787.1 CDS B479_24775 NC_019905.1 5467863 5472509 R hypothetical protein complement(5467863..5472509) Pseudomonas putida HB3267 14291335 YP_007231788.1 CDS B479_24780 NC_019905.1 5472630 5474633 R COG1292 Choline-glycine betaine transporter; choline/carnitine/betaine transporter complement(5472630..5474633) Pseudomonas putida HB3267 14291336 YP_007231789.1 CDS B479_24785 NC_019905.1 5475110 5475766 D COG1309 Transcriptional regulator; transcriptional regulator BetI 5475110..5475766 Pseudomonas putida HB3267 14291337 YP_007231790.1 CDS B479_24790 NC_019905.1 5475806 5477278 D COG1012 NAD-dependent aldehyde dehydrogenases; betaine aldehyde dehydrogenase 5475806..5477278 Pseudomonas putida HB3267 14291338 YP_007231791.1 CDS B479_24795 NC_019905.1 5477357 5479054 D COG2303 Choline dehydrogenase and related flavoproteins; choline dehydrogenase 5477357..5479054 Pseudomonas putida HB3267 14291339 YP_007231792.1 CDS B479_24800 NC_019905.1 5479319 5481061 D COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain; potassium/proton antiporter 5479319..5481061 Pseudomonas putida HB3267 14291340 YP_007231793.1 CDS B479_24805 NC_019905.1 5481097 5484405 D COG3264 Small-conductance mechanosensitive channel; hypothetical protein 5481097..5484405 Pseudomonas putida HB3267 14291341 YP_007231794.1 CDS B479_24810 NC_019905.1 5484586 5486046 D COG0397 Uncharacterized conserved protein; hypothetical protein 5484586..5486046 Pseudomonas putida HB3267 14291342 YP_007231795.1 CDS B479_24815 NC_019905.1 5486174 5486608 D COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 5486174..5486608 Pseudomonas putida HB3267 14291343 YP_007231796.1 CDS B479_24820 NC_019905.1 5486605 5487378 R COG1192 ATPases involved in chromosome partitioning; cobyrinic acid ac-diamide synthase complement(5486605..5487378) Pseudomonas putida HB3267 14291344 YP_007231797.1 CDS B479_24825 NC_019905.1 5487576 5488487 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(5487576..5488487) Pseudomonas putida HB3267 14291345 YP_007231798.1 CDS B479_24830 NC_019905.1 5488653 5489840 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 5488653..5489840 Pseudomonas putida HB3267 14291346 YP_007231799.1 CDS B479_24835 NC_019905.1 5489941 5490288 R COG3111 Uncharacterized conserved protein; hypothetical protein complement(5489941..5490288) Pseudomonas putida HB3267 14291347 YP_007231800.1 CDS hemE NC_019905.1 5490403 5491467 R COG0407 Uroporphyrinogen-III decarboxylase; uroporphyrinogen decarboxylase complement(5490403..5491467) Pseudomonas putida HB3267 14291348 YP_007231801.1 CDS gltD NC_019905.1 5491704 5493122 R COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; glutamate synthase subunit beta complement(5491704..5493122) Pseudomonas putida HB3267 14291349 YP_007231802.1 CDS gltB NC_019905.1 5493229 5497674 R COG0067 Glutamate synthase domain 1; glutamate synthase subunit alpha complement(5493229..5497674) Pseudomonas putida HB3267 14291350 YP_007231803.1 CDS B479_24855 NC_019905.1 5498047 5499681 R COG3267 Type II secretory pathway, component ExeA (predicted ATPase); sporulation domain-containing protein complement(5498047..5499681) Pseudomonas putida HB3267 14291351 YP_007231804.1 CDS aroB NC_019905.1 5499697 5500794 R COG0337 3-dehydroquinate synthetase; 3-dehydroquinate synthase complement(5499697..5500794) Pseudomonas putida HB3267 14291352 YP_007231805.1 CDS aroK NC_019905.1 5500891 5501409 R COG0703 Shikimate kinase; shikimate kinase complement(5500891..5501409) Pseudomonas putida HB3267 14291353 YP_007231806.1 CDS B479_24870 NC_019905.1 5501414 5502661 R COG4796 Type II secretory pathway, component HofQ; type IV pilus secretin PilQ complement(5501414..5502661) Pseudomonas putida HB3267 14291354 YP_007231807.1 CDS B479_24875 NC_019905.1 5502606 5503622 R COG3167 Tfp pilus assembly protein PilO; type IV pili biogenesis protein PilP complement(5502606..5503622) Pseudomonas putida HB3267 14291355 YP_007231808.1 CDS B479_24880 NC_019905.1 5503619 5504155 R COG3166 Tfp pilus assembly protein PilN; fimbrial assembly family protein complement(5503619..5504155) Pseudomonas putida HB3267 14291356 YP_007231809.1 CDS B479_24885 NC_019905.1 5504152 5505063 R COG4972 Tfp pilus assembly protein, ATPase PilM; type IV pili biogenesis protein PilM complement(5504152..5505063) Pseudomonas putida HB3267 14291357 YP_007231810.1 CDS B479_24890 NC_019905.1 5505238 5507691 D COG5009 Membrane carboxypeptidase/penicillin-binding protein; penicillin-binding protein 1A 5505238..5507691 Pseudomonas putida HB3267 14291358 YP_007231811.1 CDS B479_24895 NC_019905.1 5507853 5509121 R COG0281 Malic enzyme; malate dehydrogenase complement(5507853..5509121) Pseudomonas putida HB3267 14291359 YP_007231812.1 CDS B479_24900 NC_019905.1 5509299 5510066 R COG1525 Micrococcal nuclease (thermonuclease) homologs; nuclease complement(5509299..5510066) Pseudomonas putida HB3267 14291360 YP_007231813.1 CDS rpmE NC_019905.1 5510123 5510338 R COG0254 Ribosomal protein L31; 50S ribosomal protein L31 complement(5510123..5510338) Pseudomonas putida HB3267 14291361 YP_007231814.1 CDS B479_24910 NC_019905.1 5510506 5512725 D COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; primosome assembly protein PriA 5510506..5512725 Pseudomonas putida HB3267 14291362 YP_007231815.1 CDS argS NC_019905.1 5512944 5514680 D COG0018 Arginyl-tRNA synthetase; arginyl-tRNA ligase 5512944..5514680 Pseudomonas putida HB3267 14291363 YP_007231816.1 CDS B479_24920 NC_019905.1 5514682 5515380 D COG3087 Cell division protein; sporulation domain-containing protein 5514682..5515380 Pseudomonas putida HB3267 14291364 YP_007231817.1 CDS B479_24925 NC_019905.1 5515527 5515946 R COG2314 Predicted membrane protein; TM2 domain-containing protein complement(5515527..5515946) Pseudomonas putida HB3267 14291365 YP_007231818.1 CDS B479_24930 NC_019905.1 5516155 5516748 D COG0791 Cell wall-associated hydrolases (invasion-associated proteins); NLP/P60 protein 5516155..5516748 Pseudomonas putida HB3267 14291366 YP_007231819.1 CDS B479_24935 NC_019905.1 5516876 5517874 R COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT; twitching motility protein complement(5516876..5517874) Pseudomonas putida HB3267 14291367 YP_007231820.1 CDS B479_24940 NC_019905.1 5517940 5518626 D COG0325 Predicted enzyme with a TIM-barrel fold; alanine racemase domain-containing protein 5517940..5518626 Pseudomonas putida HB3267 14291368 YP_007231821.1 CDS B479_24945 NC_019905.1 5518665 5519483 D COG0345 Pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 5518665..5519483 Pseudomonas putida HB3267 14291369 YP_007231822.1 CDS B479_24950 NC_019905.1 5519494 5520084 D COG0762 Predicted integral membrane protein; YGGT family protein 5519494..5520084 Pseudomonas putida HB3267 14291370 YP_007231823.1 CDS metX NC_019905.1 5520184 5521323 D COG2021 Homoserine acetyltransferase; homoserine O-acetyltransferase 5520184..5521323 Pseudomonas putida HB3267 14291371 YP_007231824.1 CDS B479_24960 NC_019905.1 5521331 5521951 D COG0500 SAM-dependent methyltransferases; methionine biosynthesis protein MetW 5521331..5521951 Pseudomonas putida HB3267 14291372 YP_007231825.1 CDS B479_24965 NC_019905.1 5521974 5522408 D hypothetical protein 5521974..5522408 Pseudomonas putida HB3267 14291373 YP_007231826.1 CDS B479_24970 NC_019905.1 5522405 5523001 D COG0127 Xanthosine triphosphate pyrophosphatase; dITP/XTP pyrophosphatase 5522405..5523001 Pseudomonas putida HB3267 14291374 YP_007231827.1 CDS B479_24975 NC_019905.1 5522998 5524173 D COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; HemN family oxidoreductase 5522998..5524173 Pseudomonas putida HB3267 14291375 YP_007231828.1 CDS B479_24980 NC_019905.1 5524183 5524509 D hypothetical protein 5524183..5524509 Pseudomonas putida HB3267 14291376 YP_007231829.1 CDS trmB NC_019905.1 5525308 5526030 R COG0220 Predicted S-adenosylmethionine-dependent methyltransferase; tRNA (guanine-N(7)-)-methyltransferase complement(5525308..5526030) Pseudomonas putida HB3267 14291377 YP_007231830.1 CDS thiG NC_019905.1 5526040 5526834 R COG2022 Uncharacterized enzyme of thiazole biosynthesis; thiazole synthase complement(5526040..5526834) Pseudomonas putida HB3267 14291378 YP_007231831.1 CDS B479_24995 NC_019905.1 5526888 5527088 R COG2104 Sulfur transfer protein involved in thiamine biosynthesis; sulfur carrier protein ThiS complement(5526888..5527088) Pseudomonas putida HB3267 14291379 YP_007231832.1 CDS B479_25000 NC_019905.1 5527192 5527563 R COG2363 Uncharacterized small membrane protein; hypothetical protein complement(5527192..5527563) Pseudomonas putida HB3267 14291380 YP_007231833.1 CDS mtgA NC_019905.1 5527628 5528338 D COG0744 Membrane carboxypeptidase (penicillin-binding protein); monofunctional biosynthetic peptidoglycan transglycosylase 5527628..5528338 Pseudomonas putida HB3267 14291381 YP_007231834.1 CDS B479_25010 NC_019905.1 5528521 5529375 R COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase factor sigma-32 complement(5528521..5529375) Pseudomonas putida HB3267 14291382 YP_007231835.1 CDS B479_25015 NC_019905.1 5529487 5530509 R COG2177 Cell division protein; cell division protein FtsX complement(5529487..5530509) Pseudomonas putida HB3267 14291383 YP_007231836.1 CDS B479_25020 NC_019905.1 5530506 5531177 R COG2884 Predicted ATPase involved in cell division; cell division ATP-binding protein FtsE complement(5530506..5531177) Pseudomonas putida HB3267 14291384 YP_007231837.1 CDS B479_25025 NC_019905.1 5531180 5532691 R COG0552 Signal recognition particle GTPase; signal recognition particle-docking protein FtsY complement(5531180..5532691) Pseudomonas putida HB3267 14291385 YP_007231838.1 CDS B479_25030 NC_019905.1 5532922 5534277 D COG0612 Predicted Zn-dependent peptidases; peptidase M16 domain-containing protein 5532922..5534277 Pseudomonas putida HB3267 14291386 YP_007231839.1 CDS B479_25035 NC_019905.1 5534270 5535760 D COG0612 Predicted Zn-dependent peptidases; peptidase M16 domain-containing protein 5534270..5535760 Pseudomonas putida HB3267 14291387 YP_007231840.1 CDS B479_25040 NC_019905.1 5535760 5536362 D COG0742 N6-adenine-specific methylase; methyltransferase 5535760..5536362 Pseudomonas putida HB3267 14291388 YP_007231841.1 CDS B479_25045 NC_019905.1 5536457 5537758 D COG0612 Predicted Zn-dependent peptidases; peptidase M16 domain-containing protein 5536457..5537758 Pseudomonas putida HB3267 14291389 YP_007231842.1 CDS B479_25050 NC_019905.1 5537751 5539124 D COG0612 Predicted Zn-dependent peptidases; peptidase M16 domain-containing protein 5537751..5539124 Pseudomonas putida HB3267 14291390 YP_007231843.1 CDS B479_25055 NC_019905.1 5539185 5540177 D COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold; alpha/beta hydrolase fold protein 5539185..5540177 Pseudomonas putida HB3267 14291391 YP_007231844.1 CDS B479_25060 NC_019905.1 5540306 5541160 R COG2897 Rhodanese-related sulfurtransferase; rhodanese domain-containing protein complement(5540306..5541160) Pseudomonas putida HB3267 14291392 YP_007231845.1 CDS B479_25065 NC_019905.1 5541208 5541873 R COG1309 Transcriptional regulator; TetR family transcriptional regulator complement(5541208..5541873) Pseudomonas putida HB3267 14291393 YP_007231846.1 CDS B479_25070 NC_019905.1 5542025 5543455 D COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase 5542025..5543455 Pseudomonas putida HB3267 14291394 YP_007231847.1 CDS B479_25075 NC_019905.1 5543466 5543951 D hypothetical protein 5543466..5543951 Pseudomonas putida HB3267 14291395 YP_007231848.1 CDS B479_25080 NC_019905.1 5543972 5545570 D COG2303 Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase 5543972..5545570 Pseudomonas putida HB3267 14291396 YP_007231849.1 CDS coaD NC_019905.1 5545683 5546162 D COG0669 Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltransferase 5545683..5546162 Pseudomonas putida HB3267 14291397 YP_007231850.1 CDS B479_25090 NC_019905.1 5546271 5546522 D COG1145 Ferredoxin; 4Fe-4S ferredoxin 5546271..5546522 Pseudomonas putida HB3267 14291398 YP_007231851.1 CDS B479_25095 NC_019905.1 5546679 5547491 R COG0266 Formamidopyrimidine-DNA glycosylase; formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase complement(5546679..5547491) Pseudomonas putida HB3267 14291399 YP_007231852.1 CDS B479_25100 NC_019905.1 5547495 5548367 R COG1639 Predicted signal transduction protein; putative signal transduction protein complement(5547495..5548367) Pseudomonas putida HB3267 14291400 YP_007231853.1 CDS B479_25105 NC_019905.1 5548505 5549044 D COG0693 Putative intracellular protease/amidase; PfpI family intracellular peptidase 5548505..5549044 Pseudomonas putida HB3267 14291401 YP_007231854.1 CDS B479_25110 NC_019905.1 5549137 5550333 D COG1092 Predicted SAM-dependent methyltransferases; SAM-dependent methyltransferase 5549137..5550333 Pseudomonas putida HB3267 14291402 YP_007231855.1 CDS B479_25115 NC_019905.1 5550605 5552446 D COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; dihydroxy-acid dehydratase 5550605..5552446 Pseudomonas putida HB3267 14291403 YP_007231856.1 CDS B479_25120 NC_019905.1 5552517 5553371 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(5552517..5553371) Pseudomonas putida HB3267 14291404 YP_007231857.1 CDS B479_25125 NC_019905.1 5553511 5554179 D COG1182 Acyl carrier protein phosphodiesterase; NAD(P)H dehydrogenase (quinone) 5553511..5554179 Pseudomonas putida HB3267 14291405 YP_007231858.1 CDS B479_25130 NC_019905.1 5554189 5555244 R hypothetical protein complement(5554189..5555244) Pseudomonas putida HB3267 14291406 YP_007231859.1 CDS B479_25135 NC_019905.1 5555489 5556880 D COG1823 Predicted Na+/dicarboxylate symporter; sodium:dicarboxylate symporter 5555489..5556880 Pseudomonas putida HB3267 14291407 YP_007231860.1 CDS B479_25140 NC_019905.1 5557008 5557523 R COG0262 Dihydrofolate reductase; dihydrofolate reductase complement(5557008..5557523) Pseudomonas putida HB3267 14291408 YP_007231861.1 CDS B479_25145 NC_019905.1 5557590 5558969 D hypothetical protein 5557590..5558969 Pseudomonas putida HB3267 14291409 YP_007231862.1 CDS B479_25150 NC_019905.1 5558962 5560326 D COG0486 Predicted GTPase; HSR1-like GTP-binding protein 5558962..5560326 Pseudomonas putida HB3267 14291410 YP_007231863.1 CDS B479_25155 NC_019905.1 5560452 5561000 R COG4341 Predicted HD phosphohydrolase; metal dependent phosphohydrolase complement(5560452..5561000) Pseudomonas putida HB3267 14291411 YP_007231864.1 CDS B479_25160 NC_019905.1 5561115 5562140 R COG1840 ABC-type Fe3+ transport system, periplasmic component; ABC transporter substrate-binding protein complement(5561115..5562140) Pseudomonas putida HB3267 14291412 YP_007231865.1 CDS B479_25165 NC_019905.1 5562159 5563883 R COG1178 ABC-type Fe3+ transport system, permease component; 2-aminoethylphosphonate ABC transporter permease complement(5562159..5563883) Pseudomonas putida HB3267 14291413 YP_007231866.1 CDS B479_25170 NC_019905.1 5563885 5564943 R COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; 2-aminoethylphosphonate ABC transporter ATP-binding protein complement(5563885..5564943) Pseudomonas putida HB3267 14291414 YP_007231867.1 CDS B479_25175 NC_019905.1 5565175 5566044 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(5565175..5566044) Pseudomonas putida HB3267 14291415 YP_007231868.1 CDS B479_25180 NC_019905.1 5566054 5568267 R COG2217 Cation transport ATPase; heavy metal translocating P-type ATPase complement(5566054..5568267) Pseudomonas putida HB3267 14291416 YP_007231869.1 CDS B479_25185 NC_019905.1 5568352 5568795 D COG0789 Predicted transcriptional regulators; MerR family transcriptional regulator 5568352..5568795 Pseudomonas putida HB3267 14291417 YP_007231870.1 CDS thyA NC_019905.1 5568918 5569889 R COG0207 Thymidylate synthase; thymidylate synthase complement(5568918..5569889) Pseudomonas putida HB3267 14291418 YP_007231871.1 CDS B479_25195 NC_019905.1 5569941 5570747 R COG0682 Prolipoprotein diacylglyceryltransferase; prolipoprotein diacylglyceryl transferase complement(5569941..5570747) Pseudomonas putida HB3267 14291419 YP_007231872.1 CDS B479_25200 NC_019905.1 5570764 5571546 R COG0730 Predicted permeases; hypothetical protein complement(5570764..5571546) Pseudomonas putida HB3267 14291420 YP_007231873.1 CDS B479_25205 NC_019905.1 5571675 5572421 D COG3332 Uncharacterized conserved protein; hypothetical protein 5571675..5572421 Pseudomonas putida HB3267 14291421 YP_007231874.1 CDS B479_25210 NC_019905.1 5572557 5574836 R COG3605 Signal transduction protein containing GAF and PtsI domains; phosphoenolpyruvate-protein phosphotransferase PtsP complement(5572557..5574836) Pseudomonas putida HB3267 14291422 YP_007231875.1 CDS B479_25215 NC_019905.1 5574859 5575338 R COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; RNA pyrophosphohydrolase complement(5574859..5575338) Pseudomonas putida HB3267 14291423 YP_007231876.1 CDS B479_25220 NC_019905.1 5575480 5576136 D COG0560 Phosphoserine phosphatase; HAD family hydrolase 5575480..5576136 Pseudomonas putida HB3267 14291424 YP_007231877.1 CDS B479_25225 NC_019905.1 5576267 5576692 R COG5528 Predicted integral membrane protein; hypothetical protein complement(5576267..5576692) Pseudomonas putida HB3267 14291425 YP_007231878.1 CDS B479_25230 NC_019905.1 5576888 5578402 R COG1171 Threonine dehydratase; threonine dehydratase complement(5576888..5578402) Pseudomonas putida HB3267 14291426 YP_007231879.1 CDS B479_25235 NC_019905.1 5578538 5579212 D COG0120 Ribose 5-phosphate isomerase; ribose-5-phosphate isomerase A 5578538..5579212 Pseudomonas putida HB3267 14291427 YP_007231880.1 CDS B479_25240 NC_019905.1 5579329 5580231 R COG3204 Uncharacterized protein conserved in bacteria; SdiA-regulated domain-containing protein complement(5579329..5580231) Pseudomonas putida HB3267 14291428 YP_007231881.1 CDS B479_25245 NC_019905.1 5580322 5581242 R COG3204 Uncharacterized protein conserved in bacteria; SdiA-regulated domain-containing protein complement(5580322..5581242) Pseudomonas putida HB3267 14291429 YP_007231882.1 CDS B479_25250 NC_019905.1 5581363 5582028 R COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway); fumarylacetoacetate (FAA) hydrolase complement(5581363..5582028) Pseudomonas putida HB3267 14291430 YP_007231883.1 CDS B479_25255 NC_019905.1 5582054 5583451 R COG0277 FAD/FMN-containing dehydrogenases; FAD linked oxidase domain-containing protein complement(5582054..5583451) Pseudomonas putida HB3267 14291431 YP_007231884.1 CDS B479_25260 NC_019905.1 5583622 5584851 D COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; D-3-phosphoglycerate dehydrogenase 5583622..5584851 Pseudomonas putida HB3267 14291432 YP_007231885.1 CDS B479_25265 NC_019905.1 5584957 5585433 R hypothetical protein complement(5584957..5585433) Pseudomonas putida HB3267 14291433 YP_007231886.1 CDS B479_25270 NC_019905.1 5585679 5586146 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; periplasmic binding protein from ABC-type transporter 5585679..5586146 Pseudomonas putida HB3267 14291434 YP_007231887.1 CDS B479_25275 NC_019905.1 5586238 5586741 R COG1683 Uncharacterized conserved protein; hypothetical protein complement(5586238..5586741) Pseudomonas putida HB3267 14291435 YP_007231888.1 CDS B479_25280 NC_019905.1 5586728 5587363 R COG3751 Predicted proline hydroxylase; 2OG-Fe(II) oxygenase complement(5586728..5587363) Pseudomonas putida HB3267 14291436 YP_007231889.1 CDS B479_25285 NC_019905.1 5587474 5588226 D hypothetical protein 5587474..5588226 Pseudomonas putida HB3267 14291437 YP_007231890.1 CDS B479_25290 NC_019905.1 5588227 5589153 R COG2267 Lysophospholipase; lipase complement(5588227..5589153) Pseudomonas putida HB3267 14291438 YP_007231891.1 CDS B479_25295 NC_019905.1 5589366 5589935 D hypothetical protein 5589366..5589935 Pseudomonas putida HB3267 14291439 YP_007231892.1 CDS B479_25300 NC_019905.1 5589914 5590480 R COG0110 Acetyltransferase (isoleucine patch superfamily); hexapeptide repeat-containing transferase complement(5589914..5590480) Pseudomonas putida HB3267 14291440 YP_007231893.1 CDS B479_25305 NC_019905.1 5590567 5592972 D COG2366 Protein related to penicillin acylase; peptidase S45 penicillin amidase 5590567..5592972 Pseudomonas putida HB3267 14291441 YP_007231894.1 CDS B479_25310 NC_019905.1 5592992 5593876 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); hydrolase alpha/beta fold family protein 5592992..5593876 Pseudomonas putida HB3267 14291442 YP_007231895.1 CDS B479_25315 NC_019905.1 5594006 5594878 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; extracellular solute-binding protein complement(5594006..5594878) Pseudomonas putida HB3267 14291443 YP_007231896.1 CDS B479_25320 NC_019905.1 5594875 5595648 R COG1126 ABC-type polar amino acid transport system, ATPase component; ABC transporter-like protein complement(5594875..5595648) Pseudomonas putida HB3267 14291444 YP_007231897.1 CDS B479_25325 NC_019905.1 5595645 5596304 R COG0765 ABC-type amino acid transport system, permease component; polar amino acid ABC transporter inner membrane subunit complement(5595645..5596304) Pseudomonas putida HB3267 14291445 YP_007231898.1 CDS B479_25330 NC_019905.1 5596285 5596950 R COG0765 ABC-type amino acid transport system, permease component; polar amino acid ABC transporter inner membrane subunit complement(5596285..5596950) Pseudomonas putida HB3267 14291446 YP_007231899.1 CDS B479_25335 NC_019905.1 5597234 5598019 R COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; NLPA lipoprotein complement(5597234..5598019) Pseudomonas putida HB3267 14291447 YP_007231900.1 CDS B479_25340 NC_019905.1 5598195 5599025 R COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain; sigma-54 dependent transcriptional regulator complement(5598195..5599025) Pseudomonas putida HB3267 14291448 YP_007231901.1 CDS B479_25345 NC_019905.1 5599090 5599671 R COG3545 Predicted esterase of the alpha/beta hydrolase fold; hypothetical protein complement(5599090..5599671) Pseudomonas putida HB3267 14291449 YP_007231902.1 CDS B479_25350 NC_019905.1 5599954 5600355 R COG0848 Biopolymer transport protein; biopolymer transport protein ExbD/TolR complement(5599954..5600355) Pseudomonas putida HB3267 14291450 YP_007231903.1 CDS B479_25355 NC_019905.1 5600357 5601076 R COG0811 Biopolymer transport proteins; MotA/TolQ/ExbB proton channel complement(5600357..5601076) Pseudomonas putida HB3267 14291451 YP_007231904.1 CDS B479_25360 NC_019905.1 5601107 5601898 R COG0810 Periplasmic protein TonB, links inner and outer membranes; TonB family protein complement(5601107..5601898) Pseudomonas putida HB3267 14291452 YP_007231905.1 CDS B479_25365 NC_019905.1 5602286 5603275 R COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; sulfate ABC transporter ATPase complement(5602286..5603275) Pseudomonas putida HB3267 14291453 YP_007231906.1 CDS B479_25370 NC_019905.1 5603279 5604151 R COG4208 ABC-type sulfate transport system, permease component; sulfate ABC transporter permease complement(5603279..5604151) Pseudomonas putida HB3267 14291454 YP_007231907.1 CDS B479_25375 NC_019905.1 5604163 5604981 R COG0555 ABC-type sulfate transport system, permease component; sulfate ABC transporter permease complement(5604163..5604981) Pseudomonas putida HB3267 14291455 YP_007231908.1 CDS B479_25380 NC_019905.1 5605166 5606173 R COG1613 ABC-type sulfate transport system, periplasmic component; sulfate ABC transporter substrate-binding protein complement(5605166..5606173) Pseudomonas putida HB3267 14291456 YP_007231909.1 CDS B479_25385 NC_019905.1 5606223 5606405 R COG5583 Uncharacterized small protein; hypothetical protein complement(5606223..5606405) Pseudomonas putida HB3267 14291457 YP_007231910.1 CDS B479_25390 NC_019905.1 5606663 5609719 R COG0841 Cation/multidrug efflux pump; acriflavin resistance protein complement(5606663..5609719) Pseudomonas putida HB3267 14291458 YP_007231911.1 CDS B479_25395 NC_019905.1 5609716 5610783 R COG0845 Membrane-fusion protein; RND family efflux transporter, MFP subunit complement(5609716..5610783) Pseudomonas putida HB3267 14291459 YP_007231912.1 CDS B479_25400 NC_019905.1 5610780 5611868 R COG0845 Membrane-fusion protein; RND family efflux transporter, MFP subunit complement(5610780..5611868) Pseudomonas putida HB3267 14291460 YP_007231913.1 CDS B479_25405 NC_019905.1 5612078 5612350 R hypothetical protein complement(5612078..5612350) Pseudomonas putida HB3267 14291461 YP_007231914.1 CDS B479_25410 NC_019905.1 5612876 5613331 D COG1943 Transposase and inactivated derivatives; hypothetical protein 5612876..5613331 Pseudomonas putida HB3267 14291462 YP_007231915.1 CDS B479_25415 NC_019905.1 5613438 5614331 R COG1177 ABC-type spermidine/putrescine transport system, permease component II; ornithine carbamoyltransferase complement(5613438..5614331) Pseudomonas putida HB3267 14291463 YP_007231916.1 CDS B479_25420 NC_019905.1 5614328 5615248 R COG1176 ABC-type spermidine/putrescine transport system, permease component I; binding-protein-dependent transport system inner membrane protein complement(5614328..5615248) Pseudomonas putida HB3267 14291464 YP_007231917.1 CDS B479_25425 NC_019905.1 5615245 5616387 R COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; spermidine/putrescine ABC transporter ATPase complement(5615245..5616387) Pseudomonas putida HB3267 14291465 YP_007231918.1 CDS B479_25430 NC_019905.1 5616459 5617553 R COG0687 Spermidine/putrescine-binding periplasmic protein; extracellular solute-binding protein complement(5616459..5617553) Pseudomonas putida HB3267 14291466 YP_007231919.1 CDS B479_25435 NC_019905.1 5617712 5618809 R COG0687 Spermidine/putrescine-binding periplasmic protein; putrescine ABC transporter periplasmic putrescine-binding protein complement(5617712..5618809) Pseudomonas putida HB3267 14291467 YP_007231920.1 CDS B479_25440 NC_019905.1 5618980 5620341 R COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; aminotransferase complement(5618980..5620341) Pseudomonas putida HB3267 14291468 YP_007231921.1 CDS B479_25445 NC_019905.1 5620388 5621746 R COG0174 Glutamine synthetase; glutamate-putrescine ligase complement(5620388..5621746) Pseudomonas putida HB3267 14291469 YP_007231922.1 CDS B479_25450 NC_019905.1 5621788 5622048 D hypothetical protein 5621788..5622048 Pseudomonas putida HB3267 14291470 YP_007231923.1 CDS B479_25455 NC_019905.1 5622321 5623697 D COG0174 Glutamine synthetase; glutamine synthetase 5622321..5623697 Pseudomonas putida HB3267 14291471 YP_007231924.1 CDS B479_25460 NC_019905.1 5623849 5625147 R COG0548 Acetylglutamate kinase; N-acetylglutamate synthase complement(5623849..5625147) Pseudomonas putida HB3267 14291472 YP_007231925.1 CDS B479_25465 NC_019905.1 5625272 5626414 R COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; acetylornithine deacetylase complement(5625272..5626414) Pseudomonas putida HB3267 14291473 YP_007231926.1 CDS B479_25470 NC_019905.1 5626633 5628000 D COG3025 Uncharacterized conserved protein; adenylate cyclase 5626633..5628000 Pseudomonas putida HB3267 14291474 YP_007231927.1 CDS B479_25475 NC_019905.1 5628086 5628556 R COG1522 Transcriptional regulators; AsnC family transcriptional regulator complement(5628086..5628556) Pseudomonas putida HB3267 14291475 YP_007231928.1 CDS B479_25480 NC_019905.1 5628683 5628988 D hypothetical protein 5628683..5628988 Pseudomonas putida HB3267 14291476 YP_007231929.1 CDS B479_25485 NC_019905.1 5629192 5630877 D COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; type II secretion system protein E 5629192..5630877 Pseudomonas putida HB3267 14291477 YP_007231930.1 CDS B479_25490 NC_019905.1 5630967 5631281 D hypothetical protein 5630967..5631281 Pseudomonas putida HB3267 14291478 YP_007231931.1 CDS B479_25495 NC_019905.1 5631401 5634274 R COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain; glycine dehydrogenase complement(5631401..5634274) Pseudomonas putida HB3267 14291479 YP_007231932.1 CDS B479_25500 NC_019905.1 5634468 5634851 R COG0509 Glycine cleavage system H protein (lipoate-binding); glycine cleavage system protein H complement(5634468..5634851) Pseudomonas putida HB3267 14291480 YP_007231933.1 CDS gcvT NC_019905.1 5634903 5635985 R COG0404 Glycine cleavage system T protein (aminomethyltransferase); glycine cleavage system aminomethyltransferase T complement(5634903..5635985) Pseudomonas putida HB3267 14291481 YP_007231934.1 CDS B479_25510 NC_019905.1 5636111 5637733 R COG1178 ABC-type Fe3+ transport system, permease component; binding-protein-dependent transport system inner membrane protein complement(5636111..5637733) Pseudomonas putida HB3267 14291482 YP_007231935.1 CDS B479_25515 NC_019905.1 5637834 5638835 R COG1840 ABC-type Fe3+ transport system, periplasmic component; extracellular solute-binding protein complement(5637834..5638835) Pseudomonas putida HB3267 14291483 YP_007231936.1 CDS B479_25520 NC_019905.1 5639038 5640261 R COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase complement(5639038..5640261) Pseudomonas putida HB3267 14291484 YP_007231937.1 CDS B479_25525 NC_019905.1 5640265 5640750 R hypothetical protein complement(5640265..5640750) Pseudomonas putida HB3267 14291485 YP_007231938.1 CDS B479_25530 NC_019905.1 5640747 5641946 R COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; 2-octaprenyl-6-methoxyphenyl hydroxylase complement(5640747..5641946) Pseudomonas putida HB3267 14291486 YP_007231939.1 CDS B479_25535 NC_019905.1 5641943 5643277 R COG0006 Xaa-Pro aminopeptidase; peptidase M24 complement(5641943..5643277) Pseudomonas putida HB3267 14291487 YP_007231940.1 CDS B479_25540 NC_019905.1 5643299 5643853 R COG3079 Uncharacterized protein conserved in bacteria; hypothetical protein complement(5643299..5643853) Pseudomonas putida HB3267 14291488 YP_007231941.1 CDS B479_25545 NC_019905.1 5643999 5644217 D hypothetical protein 5643999..5644217 Pseudomonas putida HB3267 14291489 YP_007231942.1 CDS B479_25550 NC_019905.1 5644214 5644534 D COG3027 Uncharacterized protein conserved in bacteria; hypothetical protein 5644214..5644534 Pseudomonas putida HB3267 14291490 YP_007231943.1 CDS B479_25555 NC_019905.1 5644810 5645418 D COG0212 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 5644810..5645418 Pseudomonas putida HB3267 14291491 YP_007231944.1 CDS B479_25560 NC_019905.1 5645437 5645589 R hypothetical protein complement(5645437..5645589) Pseudomonas putida HB3267 14291492 YP_007231945.1 CDS B479_25565 NC_019905.1 5645769 5646218 D COG2947 Uncharacterized conserved protein; hypothetical protein 5645769..5646218 Pseudomonas putida HB3267 14291493 YP_007231946.1 CDS B479_25570 NC_019905.1 5646466 5647425 D COG0845 Membrane-fusion protein; secretion protein HlyD family protein 5646466..5647425 Pseudomonas putida HB3267 14291494 YP_007231947.1 CDS B479_25575 NC_019905.1 5647422 5650142 D COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein/permease 5647422..5650142 Pseudomonas putida HB3267 14291495 YP_007231948.1 CDS B479_25580 NC_019905.1 5650144 5651256 D COG0842 ABC-type multidrug transport system, permease component; ABC transporter 5650144..5651256 Pseudomonas putida HB3267 14291496 YP_007231949.1 CDS B479_25585 NC_019905.1 5651416 5651859 R COG3692 Uncharacterized protein conserved in bacteria; hypothetical protein complement(5651416..5651859) Pseudomonas putida HB3267 14291497 YP_007231950.1 CDS B479_25590 NC_019905.1 5652014 5652418 R COG1580 Flagellar basal body-associated protein; flagellar basal body-associated protein FliL-like protein complement(5652014..5652418) Pseudomonas putida HB3267 14291498 YP_007231951.1 CDS B479_25595 NC_019905.1 5652588 5653565 D COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases; alcohol dehydrogenase 5652588..5653565 Pseudomonas putida HB3267 14291499 YP_007231952.1 CDS B479_25600 NC_019905.1 5653698 5654243 R COG3703 Uncharacterized protein involved in cation transport; ChaC family protein complement(5653698..5654243) Pseudomonas putida HB3267 14291500 YP_007231953.1 CDS B479_25605 NC_019905.1 5654594 5655562 R COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; CDP-6-deoxy-delta-3,4-glucoseen reductase complement(5654594..5655562) Pseudomonas putida HB3267 14291501 YP_007231954.1 CDS B479_25610 NC_019905.1 5655562 5657028 R COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(5655562..5657028) Pseudomonas putida HB3267 14291502 YP_007231955.1 CDS rho NC_019905.1 5657248 5658507 R COG1158 Transcription termination factor; transcription termination factor Rho complement(5657248..5658507) Pseudomonas putida HB3267 14291503 YP_007231956.1 CDS B479_25620 NC_019905.1 5658881 5659207 R COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin complement(5658881..5659207) Pseudomonas putida HB3267 14291504 YP_007231957.1 CDS B479_25625 NC_019905.1 5659464 5660966 D COG0248 Exopolyphosphatase; Ppx/GppA phosphatase 5659464..5660966 Pseudomonas putida HB3267 14291505 YP_007231958.1 CDS B479_25630 NC_019905.1 5660953 5663193 R COG0855 Polyphosphate kinase; polyphosphate kinase complement(5660953..5663193) Pseudomonas putida HB3267 14291506 YP_007231959.1 CDS B479_25635 NC_019905.1 5663407 5664051 D COG0586 Uncharacterized membrane-associated protein; DedA family protein 5663407..5664051 Pseudomonas putida HB3267 14291507 YP_007231960.1 CDS B479_25640 NC_019905.1 5663884 5665179 R COG3000 Sterol desaturase; fatty acid hydroxylase complement(5663884..5665179) Pseudomonas putida HB3267 14291508 YP_007231961.1 CDS B479_25645 NC_019905.1 5665292 5665951 D COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis; isoprenoid biosynthesis protein 5665292..5665951 Pseudomonas putida HB3267 14291509 YP_007231962.1 CDS B479_25650 NC_019905.1 5666105 5666557 R COG1671 Uncharacterized protein conserved in bacteria; hypothetical protein complement(5666105..5666557) Pseudomonas putida HB3267 14291510 YP_007231963.1 CDS cyaA NC_019905.1 5666731 5669586 D COG3072 Adenylate cyclase; adenylate cyclase 5666731..5669586 Pseudomonas putida HB3267 14291511 YP_007231964.1 CDS B479_25660 NC_019905.1 5669702 5670112 R COG0782 Transcription elongation factor; nucleoside diphosphate kinase regulator complement(5669702..5670112) Pseudomonas putida HB3267 14291512 YP_007231965.1 CDS B479_25665 NC_019905.1 5670259 5670483 R COG3313 Predicted Fe-S protein; hypothetical protein complement(5670259..5670483) Pseudomonas putida HB3267 14291513 YP_007231966.1 CDS cyaY NC_019905.1 5670485 5670817 R COG1965 Protein implicated in iron transport, frataxin homolog; frataxin-like protein complement(5670485..5670817) Pseudomonas putida HB3267 14291514 YP_007231967.1 CDS B479_25675 NC_019905.1 5671151 5671366 D lipoprotein Lppl 5671151..5671366 Pseudomonas putida HB3267 14291515 YP_007231968.1 CDS B479_25680 NC_019905.1 5671376 5672623 D COG0019 Diaminopimelate decarboxylase; diaminopimelate decarboxylase 5671376..5672623 Pseudomonas putida HB3267 14291516 YP_007231969.1 CDS dapF NC_019905.1 5672628 5673458 D COG0253 Diaminopimelate epimerase; diaminopimelate epimerase 5672628..5673458 Pseudomonas putida HB3267 14291517 YP_007231970.1 CDS B479_25690 NC_019905.1 5673472 5674182 D COG3159 Uncharacterized protein conserved in bacteria; hypothetical protein 5673472..5674182 Pseudomonas putida HB3267 14291518 YP_007231971.1 CDS xerC NC_019905.1 5674182 5675081 D COG4973 Site-specific recombinase XerC; site-specific tyrosine recombinase XerC 5674182..5675081 Pseudomonas putida HB3267 14291519 YP_007231972.1 CDS B479_25700 NC_019905.1 5675078 5675773 D COG1011 Predicted hydrolase (HAD superfamily); HAD family hydrolase 5675078..5675773 Pseudomonas putida HB3267 14291520 YP_007231973.1 CDS B479_25705 NC_019905.1 5675954 5676283 R hypothetical protein complement(5675954..5676283) Pseudomonas putida HB3267 14291521 YP_007231974.1 CDS B479_25710 NC_019905.1 5676713 5678044 R COG0004 Ammonia permease; ammonium transporter complement(5676713..5678044) Pseudomonas putida HB3267 14291522 YP_007231975.1 CDS B479_25715 NC_019905.1 5678091 5678429 R COG0347 Nitrogen regulatory protein PII; nitrogen regulatory protein P-II complement(5678091..5678429) Pseudomonas putida HB3267 14291523 YP_007231976.1 CDS B479_25720 NC_019905.1 5678831 5679097 D COG2960 Uncharacterized protein conserved in bacteria; hypothetical protein 5678831..5679097 Pseudomonas putida HB3267 14291524 YP_007231977.1 CDS B479_25725 NC_019905.1 5679098 5679451 D AIG2 family protein 5679098..5679451 Pseudomonas putida HB3267 14291525 YP_007231978.1 CDS B479_25730 NC_019905.1 5679614 5680477 D COG0606 Predicted ATPase with chaperone activity; Mg chelatase, ChlI subunit 5679614..5680477 Pseudomonas putida HB3267 14291526 YP_007231979.1 CDS B479_25735 NC_019905.1 5680593 5680802 D hypothetical protein 5680593..5680802 Pseudomonas putida HB3267 14291527 YP_007231980.1 CDS B479_25740 NC_019905.1 5681095 5681298 D hypothetical protein 5681095..5681298 Pseudomonas putida HB3267 14291528 YP_007231981.1 CDS B479_25745 NC_019905.1 5681515 5681823 R hypothetical protein complement(5681515..5681823) Pseudomonas putida HB3267 14291529 YP_007231982.1 CDS B479_25750 NC_019905.1 5682222 5682938 D hypothetical protein 5682222..5682938 Pseudomonas putida HB3267 14291530 YP_007231983.1 CDS B479_25755 NC_019905.1 5682947 5683324 R hypothetical protein complement(5682947..5683324) Pseudomonas putida HB3267 14291531 YP_007231984.1 CDS B479_25760 NC_019905.1 5683512 5683808 D hypothetical protein 5683512..5683808 Pseudomonas putida HB3267 14291532 YP_007231985.1 CDS B479_25765 NC_019905.1 5684062 5684619 R hypothetical protein complement(5684062..5684619) Pseudomonas putida HB3267 14291533 YP_007231986.1 CDS B479_25770 NC_019905.1 5684796 5685650 R hypothetical protein complement(5684796..5685650) Pseudomonas putida HB3267 14291534 YP_007231987.1 CDS B479_25775 NC_019905.1 5686406 5686696 D hypothetical protein 5686406..5686696 Pseudomonas putida HB3267 14291535 YP_007231988.1 CDS B479_25780 NC_019905.1 5686722 5687936 D hypothetical protein 5686722..5687936 Pseudomonas putida HB3267 14291536 YP_007231989.1 CDS B479_25785 NC_019905.1 5687933 5688604 D hypothetical protein 5687933..5688604 Pseudomonas putida HB3267 14291537 YP_007231990.1 CDS B479_25790 NC_019905.1 5688609 5689307 R COG0207 Thymidylate synthase; hypothetical protein complement(5688609..5689307) Pseudomonas putida HB3267 14291538 YP_007231991.1 CDS B479_25795 NC_019905.1 5689381 5690031 R COG4870 Cysteine protease; papain family cysteine protease complement(5689381..5690031) Pseudomonas putida HB3267 14291539 YP_007231992.1 CDS B479_25800 NC_019905.1 5690028 5691044 R COG2856 Predicted Zn peptidase; hypothetical protein complement(5690028..5691044) Pseudomonas putida HB3267 14291540 YP_007231993.1 CDS B479_25805 NC_019905.1 5691048 5691404 R COG1396 Predicted transcriptional regulators; helix-turn-helix domain-containing protein complement(5691048..5691404) Pseudomonas putida HB3267 14291541 YP_007231994.1 CDS B479_25810 NC_019905.1 5691397 5691687 R hypothetical protein complement(5691397..5691687) Pseudomonas putida HB3267 14291542 YP_007231995.1 CDS B479_25815 NC_019905.1 5692439 5692756 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(5692439..5692756) Pseudomonas putida HB3267 14291543 YP_007231996.1 CDS B479_25820 NC_019905.1 5693183 5694595 R COG1538 Outer membrane protein; toluene efflux pump outer membrane protein TtgI complement(5693183..5694595) Pseudomonas putida HB3267 14291544 YP_007231997.1 CDS B479_25825 NC_019905.1 5694585 5697734 R COG0841 Cation/multidrug efflux pump; toluene efflux pump membrane transporter TtgH complement(5694585..5697734) Pseudomonas putida HB3267 14291545 YP_007231998.1 CDS B479_25830 NC_019905.1 5697748 5698803 R COG0845 Membrane-fusion protein; toluene efflux pump periplasmic linker protein TtgG complement(5697748..5698803) Pseudomonas putida HB3267 14291546 YP_007231999.1 CDS B479_25835 NC_019905.1 5699130 5699909 D COG1414 Transcriptional regulator; HTH-type transcriptional regulator TtgV 5699130..5699909 Pseudomonas putida HB3267 14291547 YP_007232000.1 CDS B479_25840 NC_019905.1 5699915 5700532 D COG1309 Transcriptional regulator; truncated transcriptional regulator TtgW 5699915..5700532 Pseudomonas putida HB3267 14291548 YP_007232001.1 CDS B479_25845 NC_019905.1 5700617 5702260 R COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; acetolactate synthase complement(5700617..5702260) Pseudomonas putida HB3267 14291549 YP_007232002.1 CDS B479_25850 NC_019905.1 5702465 5704216 R COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; monooxygenase, FAD-binding:FAD dependent oxidoreductase complement(5702465..5704216) Pseudomonas putida HB3267 14291550 YP_007232003.1 CDS B479_25855 NC_019905.1 5704629 5705897 R outer membrane porin complement(5704629..5705897) Pseudomonas putida HB3267 14291551 YP_007232004.1 CDS B479_25860 NC_019905.1 5705941 5707158 R COG0477 Permeases of the major facilitator superfamily; 3-hydroxyphenylpropionic transporter MhpT complement(5705941..5707158) Pseudomonas putida HB3267 14291552 YP_007232005.1 CDS B479_25865 NC_019905.1 5707428 5708438 R COG0119 Isopropylmalate/homocitrate/citramalate synthases; 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase complement(5707428..5708438) Pseudomonas putida HB3267 14291553 YP_007232006.1 CDS B479_25870 NC_019905.1 5708450 5709388 R COG4569 Acetaldehyde dehydrogenase (acetylating); acetaldehyde dehydrogenase complement(5708450..5709388) Pseudomonas putida HB3267 14291554 YP_007232007.1 CDS mhpD NC_019905.1 5709402 5710196 R COG3971 2-keto-4-pentenoate hydratase; 2-keto-4-pentenoate hydratase complement(5709402..5710196) Pseudomonas putida HB3267 14291555 YP_007232008.1 CDS B479_25880 NC_019905.1 5710209 5711066 R COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold family protein complement(5710209..5711066) Pseudomonas putida HB3267 14291556 YP_007232009.1 CDS B479_25885 NC_019905.1 5711090 5712034 R 3-(2,3-dihydroxyphenyl)propionate dioxygenase complement(5711090..5712034) Pseudomonas putida HB3267 14291557 YP_007232010.1 CDS B479_25890 NC_019905.1 5712373 5713038 D COG1802 Transcriptional regulators; GntR family transcriptional regulator 5712373..5713038 Pseudomonas putida HB3267 14291558 YP_007232011.1 CDS B479_25895 NC_019905.1 5713033 5713950 R COG4313 Protein involved in meta-pathway of phenol degradation; putative signal peptide protein complement(5713033..5713950) Pseudomonas putida HB3267 14291559 YP_007232012.1 CDS B479_25900 NC_019905.1 5713979 5714518 R COG0662 Mannose-6-phosphate isomerase; hypothetical protein complement(5713979..5714518) Pseudomonas putida HB3267 14291560 YP_007232013.1 CDS B479_25905 NC_019905.1 5714570 5715685 R COG1064 Zn-dependent alcohol dehydrogenases; zinc-containing alcohol dehydrogenase superfamily protein complement(5714570..5715685) Pseudomonas putida HB3267 14291561 YP_007232014.1 CDS B479_25910 NC_019905.1 5716141 5717871 D hypothetical protein 5716141..5717871 Pseudomonas putida HB3267 14291562 YP_007232015.1 CDS B479_25915 NC_019905.1 5717873 5718511 R hypothetical protein complement(5717873..5718511) Pseudomonas putida HB3267 14291563 YP_007232016.1 CDS B479_25920 NC_019905.1 5719308 5720423 R hypothetical protein complement(5719308..5720423) Pseudomonas putida HB3267 14291564 YP_007232017.1 CDS B479_25925 NC_019905.1 5720381 5721271 R COG0542 ATPases with chaperone activity, ATP-binding subunit; transposition helper protein complement(5720381..5721271) Pseudomonas putida HB3267 14291565 YP_007232018.1 CDS B479_25930 NC_019905.1 5721268 5723190 R COG2801 Transposase and inactivated derivatives; transposase complement(5721268..5723190) Pseudomonas putida HB3267 14291566 YP_007232019.1 CDS B479_25935 NC_019905.1 5723187 5723762 R hypothetical protein complement(5723187..5723762) Pseudomonas putida HB3267 14291567 YP_007232020.1 CDS B479_25940 NC_019905.1 5724036 5724638 D COG0606 Predicted ATPase with chaperone activity; Mg chelatase, ChlI subunit 5724036..5724638 Pseudomonas putida HB3267 14291568 YP_007232021.1 CDS B479_25945 NC_019905.1 5724848 5725216 R COG4566 Response regulator; response regulator receiver protein complement(5724848..5725216) Pseudomonas putida HB3267 14291569 YP_007232022.1 CDS B479_25950 NC_019905.1 5725213 5726205 R COG3710 DNA-binding winged-HTH domains; LuxR family DNA-binding response regulator complement(5725213..5726205) Pseudomonas putida HB3267 14291570 YP_007232023.1 CDS B479_25955 NC_019905.1 5726444 5731492 D COG0515 Serine/threonine protein kinase; ATPase domain-containing protein 5726444..5731492 Pseudomonas putida HB3267 14291571 YP_007232024.1 CDS B479_25960 NC_019905.1 5731547 5732173 R COG1335 Amidases related to nicotinamidase; isochorismatase superfamily hydrolase complement(5731547..5732173) Pseudomonas putida HB3267 14291572 YP_007232025.1 CDS B479_25965 NC_019905.1 5732247 5732609 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(5732247..5732609) Pseudomonas putida HB3267 14291573 YP_007232026.1 CDS B479_25970 NC_019905.1 5732730 5733764 D COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; AraC family transcriptional regulator 5732730..5733764 Pseudomonas putida HB3267 14291574 YP_007232027.1 CDS B479_25975 NC_019905.1 5734007 5735731 D COG0475 Kef-type K+ transport systems, membrane components; potassium efflux system protein 5734007..5735731 Pseudomonas putida HB3267 14291575 YP_007232028.1 CDS B479_25980 NC_019905.1 5736289 5736582 D hypothetical protein 5736289..5736582 Pseudomonas putida HB3267 14291576 YP_007232029.1 CDS B479_25985 NC_019905.1 5736760 5737389 R COG1335 Amidases related to nicotinamidase; isochorismatase superfamily hydrolase complement(5736760..5737389) Pseudomonas putida HB3267 14291577 YP_007232030.1 CDS B479_25990 NC_019905.1 5737670 5738581 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 5737670..5738581 Pseudomonas putida HB3267 14291578 YP_007232031.1 CDS B479_25995 NC_019905.1 5738675 5739937 D outer membrane porin 5738675..5739937 Pseudomonas putida HB3267 14291579 YP_007232032.1 CDS B479_26000 NC_019905.1 5739972 5741537 D COG0477 Permeases of the major facilitator superfamily; putative transporter 5739972..5741537 Pseudomonas putida HB3267 14291580 YP_007232033.1 CDS B479_26005 NC_019905.1 5741701 5743542 R COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold; amidohydrolase 3 complement(5741701..5743542) Pseudomonas putida HB3267 14291581 YP_007232034.1 CDS B479_26010 NC_019905.1 5743857 5744675 R COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold protein complement(5743857..5744675) Pseudomonas putida HB3267 14291582 YP_007232035.1 CDS B479_26015 NC_019905.1 5744715 5745023 R COG3224 Uncharacterized protein conserved in bacteria; hypothetical protein complement(5744715..5745023) Pseudomonas putida HB3267 14291583 YP_007232036.1 CDS B479_26020 NC_019905.1 5745138 5745767 R COG1335 Amidases related to nicotinamidase; isochorismatase hydrolase complement(5745138..5745767) Pseudomonas putida HB3267 14291584 YP_007232037.1 CDS B479_26025 NC_019905.1 5746088 5747515 D COG0668 Small-conductance mechanosensitive channel; cyclic nucleotide-regulated small mechanosensitive ion channel 5746088..5747515 Pseudomonas putida HB3267 14291585 YP_007232038.1 CDS B479_26030 NC_019905.1 5747624 5748910 R COG0665 Glycine/D-amino acid oxidases (deaminating); FAD dependent oxidoreductase complement(5747624..5748910) Pseudomonas putida HB3267 14291586 YP_007232039.1 CDS B479_26035 NC_019905.1 5749034 5750524 R COG1012 NAD-dependent aldehyde dehydrogenases; Aldehyde dehydrogenase family protein complement(5749034..5750524) Pseudomonas putida HB3267 14291587 YP_007232040.1 CDS B479_26040 NC_019905.1 5750661 5751551 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 5750661..5751551 Pseudomonas putida HB3267 14291588 YP_007232041.1 CDS B479_26045 NC_019905.1 5751773 5753158 D COG5383 Uncharacterized protein conserved in bacteria; hypothetical protein 5751773..5753158 Pseudomonas putida HB3267 14291589 YP_007232042.1 CDS B479_26050 NC_019905.1 5753353 5754279 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(5753353..5754279) Pseudomonas putida HB3267 14291590 YP_007232043.1 CDS B479_26055 NC_019905.1 5754436 5755824 D COG0534 Na+-driven multidrug efflux pump; multidrug efflux protein NorA 5754436..5755824 Pseudomonas putida HB3267 14291591 YP_007232044.1 CDS B479_26060 NC_019905.1 5755948 5757612 R COG2199 FOG: GGDEF domain; diguanylate cyclase/phosphodiesterase complement(5755948..5757612) Pseudomonas putida HB3267 14291592 YP_007232045.1 CDS B479_26065 NC_019905.1 5757866 5759875 D COG0210 Superfamily I DNA and RNA helicases; ATP-dependent DNA helicase Rep 5757866..5759875 Pseudomonas putida HB3267 14291593 YP_007232046.1 CDS B479_26070 NC_019905.1 5759941 5760513 D COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins; xanthine phosphoribosyltransferase 5759941..5760513 Pseudomonas putida HB3267 14291594 YP_007232047.1 CDS B479_26075 NC_019905.1 5760624 5762486 R COG0427 Acetyl-CoA hydrolase; acetyl-CoA hydrolase-like protein complement(5760624..5762486) Pseudomonas putida HB3267 14291595 YP_007232048.1 CDS B479_26080 NC_019905.1 5762762 5763184 R COG3245 Cytochrome c5; cytochrome c5 complement(5762762..5763184) Pseudomonas putida HB3267 14291596 YP_007232049.1 CDS B479_26085 NC_019905.1 5763321 5763869 R COG1396 Predicted transcriptional regulators; XRE family transcriptional regulator complement(5763321..5763869) Pseudomonas putida HB3267 14291597 YP_007232050.1 CDS dadX NC_019905.1 5763979 5765052 R COG0787 Alanine racemase; alanine racemase complement(5763979..5765052) Pseudomonas putida HB3267 14291598 YP_007232051.1 CDS B479_26095 NC_019905.1 5765201 5766505 R COG0665 Glycine/D-amino acid oxidases (deaminating); D-amino acid dehydrogenase small subunit complement(5765201..5766505) Pseudomonas putida HB3267 14291599 YP_007232052.1 CDS B479_26100 NC_019905.1 5766662 5767150 D COG1522 Transcriptional regulators; leucine-responsive regulatory protein 5766662..5767150 Pseudomonas putida HB3267 14291600 YP_007232053.1 CDS B479_26105 NC_019905.1 5767153 5767506 R COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein complement(5767153..5767506) Pseudomonas putida HB3267 14291601 YP_007232054.1 CDS B479_26110 NC_019905.1 5767706 5768998 D COG0665 Glycine/D-amino acid oxidases (deaminating); FAD dependent oxidoreductase 5767706..5768998 Pseudomonas putida HB3267 14291602 YP_007232055.1 CDS B479_26115 NC_019905.1 5769154 5769384 R hypothetical protein complement(5769154..5769384) Pseudomonas putida HB3267 14291603 YP_007232056.1 CDS B479_26130 NC_019905.1 5771053 5772609 D COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phospholipase D/transphosphatidylase 5771053..5772609 Pseudomonas putida HB3267 14291604 YP_007232057.1 CDS B479_26135 NC_019905.1 5772731 5773870 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(5772731..5773870) Pseudomonas putida HB3267 14291605 YP_007232058.1 CDS B479_26140 NC_019905.1 5774001 5775494 R COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase complement(5774001..5775494) Pseudomonas putida HB3267 14291606 YP_007232059.1 CDS B479_26145 NC_019905.1 5775691 5776050 D COG3450 Predicted enzyme of the cupin superfamily; hypothetical protein 5775691..5776050 Pseudomonas putida HB3267 14291607 YP_007232060.1 CDS rpmG NC_019905.1 5776121 5776276 R COG0267 Ribosomal protein L33; 50S ribosomal protein L33 complement(5776121..5776276) Pseudomonas putida HB3267 14291608 YP_007232061.1 CDS rpmB NC_019905.1 5776287 5776523 R COG0227 Ribosomal protein L28; 50S ribosomal protein L28 complement(5776287..5776523) Pseudomonas putida HB3267 14291609 YP_007232062.1 CDS B479_26160 NC_019905.1 5776908 5778515 D COG0747 ABC-type dipeptide transport system, periplasmic component; extracellular solute-binding protein 5776908..5778515 Pseudomonas putida HB3267 14291610 YP_007232063.1 CDS B479_26165 NC_019905.1 5778639 5779316 R COG2003 DNA repair proteins; hypothetical protein complement(5778639..5779316) Pseudomonas putida HB3267 14291611 YP_007232064.1 CDS B479_26170 NC_019905.1 5779445 5780656 D COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 5779445..5780656 Pseudomonas putida HB3267 14291612 YP_007232065.1 CDS dut NC_019905.1 5780662 5781117 D COG0756 dUTPase; deoxyuridine 5'-triphosphate nucleotidohydrolase 5780662..5781117 Pseudomonas putida HB3267 14291613 YP_007232066.1 CDS B479_26180 NC_019905.1 5781229 5782629 D COG1109 Phosphomannomutase; bifunctional phosphomannomutase/phosphoglucomutase 5781229..5782629 Pseudomonas putida HB3267 14291614 YP_007232067.1 CDS B479_26185 NC_019905.1 5782660 5783565 D COG0548 Acetylglutamate kinase; acetylglutamate kinase 5782660..5783565 Pseudomonas putida HB3267 14291615 YP_007232068.1 CDS pyrE NC_019905.1 5783746 5784387 R COG0461 Orotate phosphoribosyltransferase; orotate phosphoribosyltransferase complement(5783746..5784387) Pseudomonas putida HB3267 14291616 YP_007232069.1 CDS B479_26195 NC_019905.1 5784468 5785247 D COG0708 Exonuclease III; exodeoxyribonuclease III Xth 5784468..5785247 Pseudomonas putida HB3267 14291617 YP_007232070.1 CDS B479_26200 NC_019905.1 5785363 5785731 R COG3296 Uncharacterized protein conserved in bacteria; hypothetical protein complement(5785363..5785731) Pseudomonas putida HB3267 14291618 YP_007232071.1 CDS rph NC_019905.1 5785755 5786477 R COG0689 RNase PH; ribonuclease PH complement(5785755..5786477) Pseudomonas putida HB3267 14291619 YP_007232072.1 CDS B479_26210 NC_019905.1 5786706 5787569 D COG1561 Uncharacterized stress-induced protein; hypothetical protein 5786706..5787569 Pseudomonas putida HB3267 14291620 YP_007232073.1 CDS gmk NC_019905.1 5787583 5788203 D COG0194 Guanylate kinase; guanylate kinase 5787583..5788203 Pseudomonas putida HB3267 14291621 YP_007232074.1 CDS B479_26220 NC_019905.1 5788328 5789869 R COG0531 Amino acid transporters; amino acid permease-associated protein complement(5788328..5789869) Pseudomonas putida HB3267 14291622 YP_007232075.1 CDS B479_26225 NC_019905.1 5789983 5790756 R COG2071 Predicted glutamine amidotransferases; peptidase C26 complement(5789983..5790756) Pseudomonas putida HB3267 14291623 YP_007232076.1 CDS B479_26230 NC_019905.1 5790761 5792143 R COG0174 Glutamine synthetase; glutamate--putrescine ligase complement(5790761..5792143) Pseudomonas putida HB3267 14291624 YP_007232077.1 CDS B479_26235 NC_019905.1 5792351 5793223 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 5792351..5793223 Pseudomonas putida HB3267 14291625 YP_007232078.1 CDS rpoZ NC_019905.1 5793485 5793748 D COG1758 DNA-directed RNA polymerase, subunit K/omega; DNA-directed RNA polymerase subunit omega 5793485..5793748 Pseudomonas putida HB3267 14291626 YP_007232079.1 CDS B479_26245 NC_019905.1 5793808 5795916 D COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; (p)ppGpp synthetase I SpoT/RelA 5793808..5795916 Pseudomonas putida HB3267 14291627 YP_007232080.1 CDS B479_26250 NC_019905.1 5795940 5796320 D COG0251 Putative translation initiation inhibitor, yjgF family; Endoribonuclease 5795940..5796320 Pseudomonas putida HB3267 14291628 YP_007232081.1 CDS B479_26255 NC_019905.1 5796380 5797111 D hypothetical protein 5796380..5797111 Pseudomonas putida HB3267 14291629 YP_007232082.1 CDS B479_26260 NC_019905.1 5797253 5798122 R COG0451 Nucleoside-diphosphate-sugar epimerases; NAD-dependent epimerase/dehydratase complement(5797253..5798122) Pseudomonas putida HB3267 14291630 YP_007232083.1 CDS B479_26265 NC_019905.1 5798313 5799287 D COG0811 Biopolymer transport proteins; TonB-system energizer ExbB type-1 5798313..5799287 Pseudomonas putida HB3267 14291631 YP_007232084.1 CDS B479_26270 NC_019905.1 5799291 5799719 D COG0848 Biopolymer transport protein; biopolymer transport protein ExbD 5799291..5799719 Pseudomonas putida HB3267 14291632 YP_007232085.1 CDS B479_26275 NC_019905.1 5799716 5800447 D COG0810 Periplasmic protein TonB, links inner and outer membranes; TonB family protein 5799716..5800447 Pseudomonas putida HB3267 14291633 YP_007232086.1 CDS B479_26280 NC_019905.1 5800542 5801468 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 5800542..5801468 Pseudomonas putida HB3267 14291634 YP_007232087.1 CDS B479_26285 NC_019905.1 5801472 5803550 D COG1200 RecG-like helicase; ATP-dependent DNA helicase RecG 5801472..5803550 Pseudomonas putida HB3267 14291635 YP_007232088.1 CDS B479_26290 NC_019905.1 5803629 5805032 D COG2606 Uncharacterized conserved protein; putative signal transduction protein 5803629..5805032 Pseudomonas putida HB3267 14291636 YP_007232089.1 CDS B479_26295 NC_019905.1 5805167 5805541 R hypothetical protein complement(5805167..5805541) Pseudomonas putida HB3267 14291637 YP_007232090.1 CDS B479_26300 NC_019905.1 5805690 5805989 R COG0776 Bacterial nucleoid DNA-binding protein; histone family protein DNA-binding protein complement(5805690..5805989) Pseudomonas putida HB3267 14291638 YP_007232091.1 CDS B479_26305 NC_019905.1 5806176 5807324 R COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(5806176..5807324) Pseudomonas putida HB3267 14291639 YP_007232092.1 CDS B479_26310 NC_019905.1 5807341 5807508 R COG1773 Rubredoxin; RubB_2 complement(5807341..5807508) Pseudomonas putida HB3267 14291640 YP_007232093.1 CDS B479_26315 NC_019905.1 5807736 5808293 D COG3161 4-hydroxybenzoate synthetase (chorismate lyase); chorismate lyase 5807736..5808293 Pseudomonas putida HB3267 14291641 YP_007232094.1 CDS ubiA NC_019905.1 5808293 5809183 D COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; 4-hydroxybenzoate octaprenyltransferase 5808293..5809183 Pseudomonas putida HB3267 14291642 YP_007232095.1 CDS B479_26325 NC_019905.1 5809300 5809647 R COG4315 Uncharacterized protein conserved in bacteria; hypothetical protein complement(5809300..5809647) Pseudomonas putida HB3267 14291643 YP_007232096.1 CDS B479_26330 NC_019905.1 5809844 5810533 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulator 5809844..5810533 Pseudomonas putida HB3267 14291644 YP_007232097.1 CDS B479_26335 NC_019905.1 5810582 5811889 D COG0642 Signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 5810582..5811889 Pseudomonas putida HB3267 14291645 YP_007232098.1 CDS B479_26340 NC_019905.1 5812108 5813448 D COG1253 Hemolysins and related proteins containing CBS domains; metal ion transporter 5812108..5813448 Pseudomonas putida HB3267 14291646 YP_007232099.1 CDS B479_26345 NC_019905.1 5813482 5814378 R COG0739 Membrane proteins related to metalloendopeptidases; M24/M37 family peptidase complement(5813482..5814378) Pseudomonas putida HB3267 14291647 YP_007232100.1 CDS B479_26350 NC_019905.1 5814618 5815520 R COG0784 FOG: CheY-like receiver; response regulator receiver protein complement(5814618..5815520) Pseudomonas putida HB3267 14291648 YP_007232101.1 CDS B479_26355 NC_019905.1 5815685 5816455 R COG0704 Phosphate uptake regulator; phosphate uptake regulator PhoU complement(5815685..5816455) Pseudomonas putida HB3267 14291649 YP_007232102.1 CDS B479_26360 NC_019905.1 5816519 5817352 R COG1117 ABC-type phosphate transport system, ATPase component; phosphate transporter ATP-binding protein complement(5816519..5817352) Pseudomonas putida HB3267 14291650 YP_007232103.1 CDS B479_26365 NC_019905.1 5817425 5819095 R COG4985 ABC-type phosphate transport system, auxiliary component; phosphate ABC transporter permease complement(5817425..5819095) Pseudomonas putida HB3267 14291651 YP_007232104.1 CDS B479_26370 NC_019905.1 5819113 5821401 R COG4590 ABC-type uncharacterized transport system, permease component; binding-protein-dependent transport system inner membrane protein complement(5819113..5821401) Pseudomonas putida HB3267 14291652 YP_007232105.1 CDS B479_26375 NC_019905.1 5821541 5822539 R COG0226 ABC-type phosphate transport system, periplasmic component; phosphate binding protein complement(5821541..5822539) Pseudomonas putida HB3267 14291653 YP_007232106.1 CDS B479_26380 NC_019905.1 5822754 5824043 R COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter complement(5822754..5824043) Pseudomonas putida HB3267 14291654 YP_007232107.1 CDS B479_26385 NC_019905.1 5824405 5824803 D COG1607 Acyl-CoA hydrolase; Thioesterase superfamily protein 5824405..5824803 Pseudomonas putida HB3267 14291655 YP_007232108.1 CDS B479_26390 NC_019905.1 5824875 5825771 D COG0676 Uncharacterized enzymes related to aldose 1-epimerase; aldose 1-epimerase 5824875..5825771 Pseudomonas putida HB3267 14291656 YP_007232109.1 CDS B479_26395 NC_019905.1 5825834 5826367 R COG3495 Uncharacterized protein conserved in bacteria; hypothetical protein complement(5825834..5826367) Pseudomonas putida HB3267 14291657 YP_007232110.1 CDS B479_26400 NC_019905.1 5826416 5826661 R COG2261 Predicted membrane protein; transglycosylase-associated protein complement(5826416..5826661) Pseudomonas putida HB3267 14291658 YP_007232111.1 CDS B479_26405 NC_019905.1 5826758 5827840 R COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase); phosphoribosylaminoimidazole carboxylase ATPase subunit complement(5826758..5827840) Pseudomonas putida HB3267 14291659 YP_007232112.1 CDS purE NC_019905.1 5827851 5828342 R COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; N5-carboxyaminoimidazole ribonucleotide mutase complement(5827851..5828342) Pseudomonas putida HB3267 14291660 YP_007232113.1 CDS B479_26415 NC_019905.1 5828613 5829239 D hypothetical protein 5828613..5829239 Pseudomonas putida HB3267 14291661 YP_007232114.1 CDS B479_26420 NC_019905.1 5829231 5830148 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(5829231..5830148) Pseudomonas putida HB3267 14291662 YP_007232115.1 CDS aspA NC_019905.1 5830331 5831755 D COG1027 Aspartate ammonia-lyase; aspartate ammonia-lyase 5830331..5831755 Pseudomonas putida HB3267 14291663 YP_007232116.1 CDS B479_26430 NC_019905.1 5831939 5832931 D COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator 5831939..5832931 Pseudomonas putida HB3267 14291664 YP_007232117.1 CDS B479_26435 NC_019905.1 5833095 5834138 D COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein; histone deacetylase superfamily protein 5833095..5834138 Pseudomonas putida HB3267 14291665 YP_007232118.1 CDS B479_26440 NC_019905.1 5834138 5835241 D COG0687 Spermidine/putrescine-binding periplasmic protein; putative ABC transporter periplasmic polyamine-binding protein 5834138..5835241 Pseudomonas putida HB3267 14291666 YP_007232119.1 CDS B479_26445 NC_019905.1 5835353 5836498 R COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; GntR family transcriptional regulator complement(5835353..5836498) Pseudomonas putida HB3267 14291667 YP_007232120.1 CDS B479_26450 NC_019905.1 5836988 5837617 D COG2808 Transcriptional regulator; FMN-binding negative transcriptional regulator 5836988..5837617 Pseudomonas putida HB3267 14291668 YP_007232121.1 CDS B479_26455 NC_019905.1 5837629 5838075 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; acetyltransferase 5837629..5838075 Pseudomonas putida HB3267 14291669 YP_007232122.1 CDS B479_26460 NC_019905.1 5838084 5838755 D COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; acetyltransferase 5838084..5838755 Pseudomonas putida HB3267 14291670 YP_007232123.1 CDS B479_26465 NC_019905.1 5838916 5840724 R COG5016 Pyruvate/oxaloacetate carboxyltransferase; pyruvate carboxylase subunit B complement(5838916..5840724) Pseudomonas putida HB3267 14291671 YP_007232124.1 CDS B479_26470 NC_019905.1 5840736 5842151 R COG0439 Biotin carboxylase; pyruvate carboxylase subunit A complement(5840736..5842151) Pseudomonas putida HB3267 14291672 YP_007232125.1 CDS B479_26475 NC_019905.1 5842341 5843303 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 5842341..5843303 Pseudomonas putida HB3267 14291673 YP_007232126.1 CDS B479_26480 NC_019905.1 5843613 5844479 R COG1737 Transcriptional regulators; RpiR family transcriptional regulator complement(5843613..5844479) Pseudomonas putida HB3267 14291674 YP_007232127.1 CDS B479_26485 NC_019905.1 5844583 5846025 D COG0364 Glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 5844583..5846025 Pseudomonas putida HB3267 14291675 YP_007232128.1 CDS B479_26490 NC_019905.1 5846113 5846427 D hypothetical protein 5846113..5846427 Pseudomonas putida HB3267 14291676 YP_007232129.1 CDS uvrD NC_019905.1 5846558 5848744 D COG0210 Superfamily I DNA and RNA helicases; DNA-dependent helicase II 5846558..5848744 Pseudomonas putida HB3267 14291677 YP_007232130.1 CDS B479_26500 NC_019905.1 5849000 5849854 D COG4395 Uncharacterized protein conserved in bacteria; import inner membrane translocase subunit Tim44 5849000..5849854 Pseudomonas putida HB3267 14291678 YP_007232131.1 CDS B479_26505 NC_019905.1 5849969 5850376 D hypothetical protein 5849969..5850376 Pseudomonas putida HB3267 14291679 YP_007232132.1 CDS B479_26510 NC_019905.1 5850589 5852349 R COG0475 Kef-type K+ transport systems, membrane components; sodium/hydrogen exchanger complement(5850589..5852349) Pseudomonas putida HB3267 14291680 YP_007232133.1 CDS B479_26515 NC_019905.1 5852693 5853178 D COG1607 Acyl-CoA hydrolase; thioesterase superfamily protein 5852693..5853178 Pseudomonas putida HB3267 14291681 YP_007232134.1 CDS B479_26520 NC_019905.1 5853175 5854047 R COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase; pyridoxamine kinase complement(5853175..5854047) Pseudomonas putida HB3267 14291682 YP_007232135.1 CDS B479_26525 NC_019905.1 5854168 5854560 D hypothetical protein 5854168..5854560 Pseudomonas putida HB3267 14291683 YP_007232136.1 CDS B479_26530 NC_019905.1 5854561 5855532 R COG0523 Putative GTPases (G3E family); cobalamin synthesis protein P47K complement(5854561..5855532) Pseudomonas putida HB3267 14291684 YP_007232137.1 CDS B479_26535 NC_019905.1 5855573 5856199 R hypothetical protein complement(5855573..5856199) Pseudomonas putida HB3267 14291685 YP_007232138.1 CDS B479_26540 NC_019905.1 5856196 5857404 R COG0523 Putative GTPases (G3E family); cobalamin synthesis protein P47K complement(5856196..5857404) Pseudomonas putida HB3267 14291686 YP_007232139.1 CDS B479_26545 NC_019905.1 5857607 5858512 D COG1469 Uncharacterized conserved protein; GTP cyclohydrolase 5857607..5858512 Pseudomonas putida HB3267 14291687 YP_007232140.1 CDS B479_26550 NC_019905.1 5858496 5859023 R hypothetical protein complement(5858496..5859023) Pseudomonas putida HB3267 14291688 YP_007232141.1 CDS cls NC_019905.1 5859155 5860594 D COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; cardiolipin synthetase 5859155..5860594 Pseudomonas putida HB3267 14291689 YP_007232142.1 CDS B479_26560 NC_019905.1 5860735 5861919 R COG2230 Cyclopropane fatty acid synthase and related methyltransferases; cyclopropane-fatty-acyl-phospholipid synthase complement(5860735..5861919) Pseudomonas putida HB3267 14291690 YP_007232143.1 CDS B479_26565 NC_019905.1 5862127 5863527 D COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; dihydrolipoamide dehydrogenase 5862127..5863527 Pseudomonas putida HB3267 14291691 YP_007232144.1 CDS B479_26570 NC_019905.1 5864008 5867010 D COG1131 ABC-type multidrug transport system, ATPase component; hypothetical protein 5864008..5867010 Pseudomonas putida HB3267 14291692 YP_007232145.1 CDS B479_26575 NC_019905.1 5867384 5868148 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain dehydrogenase/reductase SDR 5867384..5868148 Pseudomonas putida HB3267 14291693 YP_007232146.1 CDS B479_26580 NC_019905.1 5868246 5869004 D COG3192 Ethanolamine utilization protein; ethanolamine utilization protein EutH 5868246..5869004 Pseudomonas putida HB3267 14291694 YP_007232147.1 CDS B479_26585 NC_019905.1 5869050 5869835 R COG3204 Uncharacterized protein conserved in bacteria; hypothetical protein complement(5869050..5869835) Pseudomonas putida HB3267 14291695 YP_007232148.1 CDS B479_26590 NC_019905.1 5870055 5870414 R COG1734 DnaK suppressor protein; hypothetical protein complement(5870055..5870414) Pseudomonas putida HB3267 14291696 YP_007232149.1 CDS B479_26595 NC_019905.1 5870414 5871265 R COG0589 Universal stress protein UspA and related nucleotide-binding proteins; UspA, universal stress protein complement(5870414..5871265) Pseudomonas putida HB3267 14291697 YP_007232150.1 CDS B479_26600 NC_019905.1 5871280 5872767 R COG0659 Sulfate permease and related transporters (MFS superfamily); sulfate permease complement(5871280..5872767) Pseudomonas putida HB3267 14291698 YP_007232151.1 CDS B479_26605 NC_019905.1 5873111 5874097 R COG2200 FOG: EAL domain; Diguanylate phosphodiesterase complement(5873111..5874097) Pseudomonas putida HB3267 14291699 YP_007232152.1 CDS B479_26610 NC_019905.1 5874113 5874349 R mercury resistance protein complement(5874113..5874349) Pseudomonas putida HB3267 14291700 YP_007232153.1 CDS B479_26615 NC_019905.1 5874346 5874711 R COG0789 Predicted transcriptional regulators; transcriptional regulator MerD complement(5874346..5874711) Pseudomonas putida HB3267 14291701 YP_007232154.1 CDS B479_26809 NC_019906.1 115 1128 D COG0582 Integrase; integrase/recombinase 115..1128 Pseudomonas putida HB3267 14281714 YP_007232155.1 CDS B479_26814 NC_019906.1 1087 1266 R putative transcriptional regulator complement(1087..1266) Pseudomonas putida HB3267 14281621 YP_007232156.1 CDS B479_26819 NC_019906.1 1740 2534 R COG3316 Transposase and inactivated derivatives; transposase for insertion sequence IS6100 complement(1740..2534) Pseudomonas putida HB3267 14281622 YP_007232157.1 CDS B479_26824 NC_019906.1 3011 3511 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; GCN5-like N-acetyltransferase complement(3011..3511) Pseudomonas putida HB3267 14281623 YP_007232158.1 CDS B479_26829 NC_019906.1 3639 4514 R COG0294 Dihydropteroate synthase and related enzymes; dihydropteroate synthase complement(3639..4514) Pseudomonas putida HB3267 14281624 YP_007232159.1 CDS B479_26834 NC_019906.1 4616 5629 D COG0582 Integrase; integrase/recombinase 4616..5629 Pseudomonas putida HB3267 14281625 YP_007232160.1 CDS B479_26839 NC_019906.1 5588 5767 R putative transcriptional regulator complement(5588..5767) Pseudomonas putida HB3267 14281626 YP_007232161.1 CDS B479_26844 NC_019906.1 5930 6856 D COG1961 Site-specific recombinases, DNA invertase Pin homologs; hypothetical protein 5930..6856 Pseudomonas putida HB3267 14281627 YP_007232162.1 CDS B479_26849 NC_019906.1 7184 7861 R COG1309 Transcriptional regulator; tetracycline repressor protein complement(7184..7861) Pseudomonas putida HB3267 14281628 YP_007232163.1 CDS B479_26854 NC_019906.1 7865 9139 D COG0477 Permeases of the major facilitator superfamily; tetracycline efflux protein 7865..9139 Pseudomonas putida HB3267 14281629 YP_007232164.1 CDS B479_26859 NC_019906.1 9171 10055 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein complement(9171..10055) Pseudomonas putida HB3267 14281630 YP_007232165.1 CDS B479_26864 NC_019906.1 10609 11460 D replication protein C 10609..11460 Pseudomonas putida HB3267 14281631 YP_007232166.1 CDS B479_26869 NC_019906.1 11768 12583 D COG0294 Dihydropteroate synthase and related enzymes; dihydropteroate synthase 11768..12583 Pseudomonas putida HB3267 14281632 YP_007232167.1 CDS B479_26874 NC_019906.1 12954 13790 R COG3570 Streptomycin 6-kinase; streptomycin 3''-kinase complement(12954..13790) Pseudomonas putida HB3267 14281633 YP_007232168.1 CDS B479_26879 NC_019906.1 13790 14593 R COG3231 Aminoglycoside phosphotransferase; StrA complement(13790..14593) Pseudomonas putida HB3267 14281634 YP_007232169.1 CDS B479_26884 NC_019906.1 14659 15027 R COG1961 Site-specific recombinases, DNA invertase Pin homologs; resolvase complement(14659..15027) Pseudomonas putida HB3267 14281635 YP_007232170.1 CDS B479_26889 NC_019906.1 15033 15737 R COG3316 Transposase and inactivated derivatives; transposase complement(15033..15737) Pseudomonas putida HB3267 14281636 YP_007232171.1 CDS B479_26894 NC_019906.1 15894 16244 R COG3231 Aminoglycoside phosphotransferase; aminoglycoside 3'-phosphotransferase complement(15894..16244) Pseudomonas putida HB3267 14281637 YP_007232172.1 CDS B479_26899 NC_019906.1 16860 17042 D COG3316 Transposase and inactivated derivatives; TnpA 16860..17042 Pseudomonas putida HB3267 14281638 YP_007232173.1 CDS B479_26904 NC_019906.1 17430 17756 R hypothetical protein complement(17430..17756) Pseudomonas putida HB3267 14281639 YP_007232174.1 CDS B479_26909 NC_019906.1 17780 18115 R hypothetical protein complement(17780..18115) Pseudomonas putida HB3267 14281640 YP_007232175.1 CDS B479_26914 NC_019906.1 18130 18465 R COG5606 Uncharacterized conserved small protein; hypothetical protein complement(18130..18465) Pseudomonas putida HB3267 14281641 YP_007232176.1 CDS B479_26919 NC_019906.1 18446 18823 R COG4679 Phage-related protein; hypothetical protein complement(18446..18823) Pseudomonas putida HB3267 14281642 YP_007232177.1 CDS B479_26924 NC_019906.1 19015 19617 D COG1961 Site-specific recombinases, DNA invertase Pin homologs; Tn5501/Tn5503/Tn4662 resolvase 19015..19617 Pseudomonas putida HB3267 14281643 YP_007232178.1 CDS B479_26929 NC_019906.1 19601 22630 D COG4644 Transposase and inactivated derivatives, TnpA family; transposase 19601..22630 Pseudomonas putida HB3267 14281644 YP_007232179.1 CDS B479_26934 NC_019906.1 23474 23842 D hypothetical protein 23474..23842 Pseudomonas putida HB3267 14281645 YP_007232180.1 CDS B479_26939 NC_019906.1 23875 24192 D hypothetical protein 23875..24192 Pseudomonas putida HB3267 14281646 YP_007232181.1 CDS B479_26944 NC_019906.1 24196 25284 D hypothetical protein 24196..25284 Pseudomonas putida HB3267 14281647 YP_007232182.1 CDS B479_26949 NC_019906.1 25295 25555 D hypothetical protein 25295..25555 Pseudomonas putida HB3267 14281648 YP_007232183.1 CDS B479_26954 NC_019906.1 25760 27439 D COG2801 Transposase and inactivated derivatives; putative transposase 25760..27439 Pseudomonas putida HB3267 14281649 YP_007232184.1 CDS B479_26959 NC_019906.1 27442 28341 D COG1219 ATP-dependent protease Clp, ATPase subunit; TniB protein 27442..28341 Pseudomonas putida HB3267 14281650 YP_007232185.1 CDS B479_26964 NC_019906.1 28398 28898 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; GCN5-like N-acetyltransferase complement(28398..28898) Pseudomonas putida HB3267 14281651 YP_007232186.1 CDS B479_26969 NC_019906.1 29026 29865 R COG0294 Dihydropteroate synthase and related enzymes; dihydropteroate synthase complement(29026..29865) Pseudomonas putida HB3267 14281652 YP_007232187.1 CDS B479_26974 NC_019906.1 29859 30206 R COG2076 Membrane transporters of cations and cationic drugs; multidrug efflux protein complement(29859..30206) Pseudomonas putida HB3267 14281653 YP_007232188.1 CDS B479_26979 NC_019906.1 30398 31657 R COG0477 Permeases of the major facilitator superfamily; hypothetical protein complement(30398..31657) Pseudomonas putida HB3267 14281654 YP_007232189.1 CDS B479_26984 NC_019906.1 31879 32670 R COG1708 Predicted nucleotidyltransferases; aminoglycoside resistance protein complement(31879..32670) Pseudomonas putida HB3267 14281655 YP_007232190.1 CDS B479_26989 NC_019906.1 32740 33366 R COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; Aac(6)-Ib complement(32740..33366) Pseudomonas putida HB3267 14281656 YP_007232191.1 CDS B479_26994 NC_019906.1 33402 34202 R COG0491 Zn-dependent hydrolases, including glyoxylases; Vim-1 complement(33402..34202) Pseudomonas putida HB3267 14281657 YP_007232192.1 CDS B479_26999 NC_019906.1 34369 35382 D COG0582 Integrase; integrase/recombinase 34369..35382 Pseudomonas putida HB3267 14281658 YP_007232193.1 CDS B479_27004 NC_019906.1 35341 35520 R putative transcriptional regulator complement(35341..35520) Pseudomonas putida HB3267 14281659 YP_007232194.1 CDS B479_27009 NC_019906.1 35796 36332 R TnpA complement(35796..36332) Pseudomonas putida HB3267 14281660 YP_007232195.1 CDS B479_27014 NC_019906.1 36344 36739 R putative nucleic-acid-binding protein, contains PIN domain complement(36344..36739) Pseudomonas putida HB3267 14281661 YP_007232196.1 CDS B479_27019 NC_019906.1 36736 36987 R COG2002 Regulators of stationary/sporulation gene expression; regulator of stationary/sporulation gene expression complement(36736..36987) Pseudomonas putida HB3267 14281662 YP_007232197.1 CDS B479_27024 NC_019906.1 37169 37735 D COG1961 Site-specific recombinases, DNA invertase Pin homologs; TnpR2 37169..37735 Pseudomonas putida HB3267 14281663 YP_007232198.1 CDS B479_27029 NC_019906.1 37826 38032 D hypothetical protein 37826..38032 Pseudomonas putida HB3267 14281664 YP_007232199.1 CDS B479_27034 NC_019906.1 38025 38642 D COG1961 Site-specific recombinases, DNA invertase Pin homologs; resolvase 38025..38642 Pseudomonas putida HB3267 14281665 YP_007232200.1 CDS B479_27039 NC_019906.1 38629 39765 D COG5534 Plasmid replication initiator protein; Rep 38629..39765 Pseudomonas putida HB3267 14281666 YP_007232201.1 CDS B479_27044 NC_019906.1 40204 40416 R hypothetical protein complement(40204..40416) Pseudomonas putida HB3267 14281667 YP_007232202.1 CDS B479_27049 NC_019906.1 40611 41261 D KrfA 40611..41261 Pseudomonas putida HB3267 14281668 YP_007232203.1 CDS B479_27054 NC_019906.1 41344 41556 D hypothetical protein 41344..41556 Pseudomonas putida HB3267 14281669 YP_007232204.1 CDS B479_27059 NC_019906.1 41884 42309 D COG1430 Uncharacterized conserved protein; hypothetical protein 41884..42309 Pseudomonas putida HB3267 14281670 YP_007232205.1 CDS B479_27064 NC_019906.1 42319 42555 D COG4456 Virulence-associated protein and related proteins; VagC 42319..42555 Pseudomonas putida HB3267 14281671 YP_007232206.1 CDS B479_27069 NC_019906.1 42552 42989 D COG1487 Predicted nucleic acid-binding protein, contains PIN domain; VagD 42552..42989 Pseudomonas putida HB3267 14281672 YP_007232207.1 CDS B479_27074 NC_019906.1 42996 43157 D hypothetical protein 42996..43157 Pseudomonas putida HB3267 14281673 YP_007232208.1 CDS B479_27079 NC_019906.1 43285 43545 D hypothetical protein 43285..43545 Pseudomonas putida HB3267 14281674 YP_007232209.1 CDS B479_27084 NC_019906.1 44226 45062 D hypothetical protein 44226..45062 Pseudomonas putida HB3267 14281675 YP_007232210.1 CDS B479_27089 NC_019906.1 45118 45546 D hypothetical protein 45118..45546 Pseudomonas putida HB3267 14281676 YP_007232211.1 CDS B479_27094 NC_019906.1 45563 46066 D hypothetical protein 45563..46066 Pseudomonas putida HB3267 14281677 YP_007232212.1 CDS B479_27099 NC_019906.1 46127 46477 D hypothetical protein 46127..46477 Pseudomonas putida HB3267 14281678 YP_007232213.1 CDS B479_27104 NC_019906.1 46552 46737 D hypothetical protein 46552..46737 Pseudomonas putida HB3267 14281679 YP_007232214.1 CDS B479_27109 NC_019906.1 47395 47649 D hypothetical protein 47395..47649 Pseudomonas putida HB3267 14281680 YP_007232215.1 CDS B479_27114 NC_019906.1 47957 48202 D hypothetical protein 47957..48202 Pseudomonas putida HB3267 14281681 YP_007232216.1 CDS B479_27119 NC_019906.1 48249 49028 R Mpr complement(48249..49028) Pseudomonas putida HB3267 14281682 YP_007232217.1 CDS B479_27124 NC_019906.1 49297 49563 R StbC complement(49297..49563) Pseudomonas putida HB3267 14281683 YP_007232218.1 CDS B479_27129 NC_019906.1 49699 50403 R StbB complement(49699..50403) Pseudomonas putida HB3267 14281684 YP_007232219.1 CDS B479_27134 NC_019906.1 50407 50763 R StaA complement(50407..50763) Pseudomonas putida HB3267 14281685 YP_007232220.1 CDS B479_27139 NC_019906.1 51258 51587 D hypothetical protein 51258..51587 Pseudomonas putida HB3267 14281686 YP_007232221.1 CDS B479_27144 NC_019906.1 51587 53125 D COG0433 Predicted ATPase; TraJ 51587..53125 Pseudomonas putida HB3267 14281687 YP_007232222.1 CDS B479_27149 NC_019906.1 53126 56080 D COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; TraI 53126..56080 Pseudomonas putida HB3267 14281688 YP_007232223.1 CDS B479_27154 NC_019906.1 56116 56625 R hypothetical protein complement(56116..56625) Pseudomonas putida HB3267 14281689 YP_007232224.1 CDS B479_27159 NC_019906.1 57127 57453 R hypothetical protein complement(57127..57453) Pseudomonas putida HB3267 14281690 YP_007232225.1 CDS B479_27164 NC_019906.1 57477 57812 R hypothetical protein complement(57477..57812) Pseudomonas putida HB3267 14281691 YP_007232226.1 CDS B479_27169 NC_019906.1 57827 58162 R COG5606 Uncharacterized conserved small protein; hypothetical protein complement(57827..58162) Pseudomonas putida HB3267 14281692 YP_007232227.1 CDS B479_27174 NC_019906.1 58143 58520 R COG4679 Phage-related protein; hypothetical protein complement(58143..58520) Pseudomonas putida HB3267 14281693 YP_007232228.1 CDS B479_27179 NC_019906.1 58712 59314 D COG1961 Site-specific recombinases, DNA invertase Pin homologs; Tn5501/Tn5503/Tn4662 resolvase 58712..59314 Pseudomonas putida HB3267 14281694 YP_007232229.1 CDS B479_27184 NC_019906.1 59298 62327 D COG4644 Transposase and inactivated derivatives, TnpA family; transposase 59298..62327 Pseudomonas putida HB3267 14281695 YP_007232230.1 CDS B479_27189 NC_019906.1 62502 63353 D COG2367 Beta-lactamase class A; class-A beta-lactamase 62502..63353 Pseudomonas putida HB3267 14281696 YP_007232231.1 CDS B479_27194 NC_019906.1 64724 65158 R COG0789 Predicted transcriptional regulators; transcriptional regulator MerR complement(64724..65158) Pseudomonas putida HB3267 14281697 YP_007232232.1 CDS B479_27199 NC_019906.1 65230 65580 D mercuric transport protein 65230..65580 Pseudomonas putida HB3267 14281698 YP_007232233.1 CDS B479_27204 NC_019906.1 65596 65871 D COG2608 Copper chaperone; mercuric transport protein periplasmic component MerP 65596..65871 Pseudomonas putida HB3267 14281699 YP_007232234.1 CDS B479_27209 NC_019906.1 65943 67628 D COG2217 Cation transport ATPase; mercuric reductase 65943..67628 Pseudomonas putida HB3267 14281700 YP_007232235.1 CDS B479_27214 NC_019906.1 67646 68011 D COG0789 Predicted transcriptional regulators; transcriptional regulator MerD 67646..68011 Pseudomonas putida HB3267 14281701 YP_007232236.1 CDS B479_27219 NC_019906.1 68008 68244 D mercury resistance protein 68008..68244 Pseudomonas putida HB3267 14281702 YP_007232237.1 CDS B479_27224 NC_019906.1 68241 69230 D COG2200 FOG: EAL domain; Diguanylate phosphodiesterase 68241..69230 Pseudomonas putida HB3267 14281703 YP_007232238.1 CDS B479_27229 NC_019906.1 69574 71061 D COG0659 Sulfate permease and related transporters (MFS superfamily); sulfate permease 69574..71061 Pseudomonas putida HB3267 14281704 YP_007232239.1 CDS B479_27234 NC_019906.1 71076 71927 D COG0589 Universal stress protein UspA and related nucleotide-binding proteins; UspA, universal stress protein 71076..71927 Pseudomonas putida HB3267 14281705 YP_007232240.1 CDS B479_27239 NC_019906.1 71927 72286 D COG1734 DnaK suppressor protein; hypothetical protein 71927..72286 Pseudomonas putida HB3267 14281706 YP_007232241.1 CDS B479_27244 NC_019906.1 72414 72689 R COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; transposon Tn21 modulator protein complement(72414..72689) Pseudomonas putida HB3267 14281707 YP_007232242.1 CDS B479_27249 NC_019906.1 72658 73671 R COG0582 Integrase; integrase/recombinase complement(72658..73671) Pseudomonas putida HB3267 14281708 YP_007232243.1 CDS B479_27254 NC_019906.1 73817 74350 D aminoglycoside 2''-O-adenyltransferase protein 73817..74350 Pseudomonas putida HB3267 14281709 YP_007232244.1 CDS B479_27259 NC_019906.1 74513 74845 D COG2076 Membrane transporters of cations and cationic drugs; quaternary ammonium compound-resistance protein QacE 74513..74845 Pseudomonas putida HB3267 14281710 YP_007232245.1 CDS B479_27264 NC_019906.1 75130 76173 R COG3547 Transposase and inactivated derivatives; transposase IS116/IS110/IS902 family protein complement(75130..76173) Pseudomonas putida HB3267 14281711 YP_007232246.1 CDS B479_27269 NC_019906.1 76389 77012 R COG1961 Site-specific recombinases, DNA invertase Pin homologs; resolvase complement(76389..77012) Pseudomonas putida HB3267 14281712 YP_007232247.1 CDS B479_27274 NC_019906.1 77148 80033 D COG4644 Transposase and inactivated derivatives, TnpA family; transposase A 77148..80033 Pseudomonas putida HB3267 14281713 B479_t26627 tRNA B479_t26627 NC_019905.1 253240 253316 D tRNA-Ile 253240..253316 Pseudomonas putida HB3267 14291783 B479_t26629 tRNA B479_t26629 NC_019905.1 253341 253416 D tRNA-Ala 253341..253416 Pseudomonas putida HB3267 14291702 B479_t26631 tRNA B479_t26631 NC_019905.1 338110 338186 R tRNA-Arg complement(338110..338186) Pseudomonas putida HB3267 14286693 B479_t26633 tRNA B479_t26633 NC_019905.1 427045 427120 R tRNA-Thr complement(427045..427120) Pseudomonas putida HB3267 14286768 B479_t26635 tRNA B479_t26635 NC_019905.1 437365 437440 R tRNA-Phe complement(437365..437440) Pseudomonas putida HB3267 14286779 B479_t26637 tRNA B479_t26637 NC_019905.1 568315 568391 R tRNA-Met complement(568315..568391) Pseudomonas putida HB3267 14286889 B479_t26639 tRNA B479_t26639 NC_019905.1 633674 633757 D tRNA-Tyr 633674..633757 Pseudomonas putida HB3267 14286943 B479_t26641 tRNA B479_t26641 NC_019905.1 633782 633855 D tRNA-Gly 633782..633855 Pseudomonas putida HB3267 14291708 B479_t26643 tRNA B479_t26643 NC_019905.1 633885 633960 D tRNA-Thr 633885..633960 Pseudomonas putida HB3267 14291709 B479_t26645 tRNA B479_t26645 NC_019905.1 635288 635363 D tRNA-Trp 635288..635363 Pseudomonas putida HB3267 14286945 B479_t26647 tRNA B479_t26647 NC_019905.1 685623 685718 D tRNA-Sec 685623..685718 Pseudomonas putida HB3267 14287000 B479_t26649 tRNA B479_t26649 NC_019905.1 828456 828531 D tRNA-Asn 828456..828531 Pseudomonas putida HB3267 14287130 B479_t26651 tRNA B479_t26651 NC_019905.1 828536 828612 D tRNA-Pro 828536..828612 Pseudomonas putida HB3267 14291713 B479_t26653 tRNA B479_t26653 NC_019905.1 828619 828694 D tRNA-Lys 828619..828694 Pseudomonas putida HB3267 14291714 B479_t26655 tRNA B479_t26655 NC_019905.1 828742 828818 D tRNA-Pro 828742..828818 Pseudomonas putida HB3267 14291715 B479_t26657 tRNA B479_t26657 NC_019905.1 828824 828899 D tRNA-Lys 828824..828899 Pseudomonas putida HB3267 14291716 B479_t26659 tRNA B479_t26659 NC_019905.1 836637 836712 D tRNA-Thr 836637..836712 Pseudomonas putida HB3267 14287140 B479_t26661 tRNA B479_t26661 NC_019905.1 899945 900021 R tRNA-Met complement(899945..900021) Pseudomonas putida HB3267 14287196 B479_t26663 tRNA B479_t26663 NC_019905.1 941141 941215 R tRNA-Gln complement(941141..941215) Pseudomonas putida HB3267 14287231 B479_t26665 tRNA B479_t26665 NC_019905.1 1052154 1052238 R tRNA-Leu complement(1052154..1052238) Pseudomonas putida HB3267 14287338 B479_t26667 tRNA B479_t26667 NC_019905.1 1457922 1457997 D tRNA-Val 1457922..1457997 Pseudomonas putida HB3267 14287715 B479_t26669 tRNA B479_t26669 NC_019905.1 1458011 1458087 D tRNA-Asp 1458011..1458087 Pseudomonas putida HB3267 14291722 B479_t26671 tRNA B479_t26671 NC_019905.1 1458258 1458333 D tRNA-Val 1458258..1458333 Pseudomonas putida HB3267 14291723 B479_t26673 tRNA B479_t26673 NC_019905.1 1458347 1458423 D tRNA-Asp 1458347..1458423 Pseudomonas putida HB3267 14291724 B479_t26675 tRNA B479_t26675 NC_019905.1 1602087 1602176 D tRNA-Ser 1602087..1602176 Pseudomonas putida HB3267 14287845 B479_t26677 tRNA B479_t26677 NC_019905.1 1630251 1630326 D tRNA-Glu 1630251..1630326 Pseudomonas putida HB3267 14287873 B479_t26679 tRNA B479_t26679 NC_019905.1 1630331 1630406 D tRNA-Gly 1630331..1630406 Pseudomonas putida HB3267 14291727 B479_t26681 tRNA B479_t26681 NC_019905.1 1630496 1630571 D tRNA-Glu 1630496..1630571 Pseudomonas putida HB3267 14291728 B479_t26683 tRNA B479_t26683 NC_019905.1 1630575 1630650 D tRNA-Gly 1630575..1630650 Pseudomonas putida HB3267 14291729 B479_t26685 tRNA B479_t26685 NC_019905.1 1630736 1630811 D tRNA-Gly 1630736..1630811 Pseudomonas putida HB3267 14291730 B479_t26687 tRNA B479_t26687 NC_019905.1 1675301 1675376 R tRNA-Asn complement(1675301..1675376) Pseudomonas putida HB3267 14287917 B479_t26689 tRNA B479_t26689 NC_019905.1 1683533 1683608 D tRNA-Ala 1683533..1683608 Pseudomonas putida HB3267 14287922 B479_t26691 tRNA B479_t26691 NC_019905.1 1683681 1683756 D tRNA-Glu 1683681..1683756 Pseudomonas putida HB3267 14291733 B479_t26693 tRNA B479_t26693 NC_019905.1 1683810 1683885 D tRNA-Ala 1683810..1683885 Pseudomonas putida HB3267 14291734 B479_t26695 tRNA B479_t26695 NC_019905.1 1683928 1684003 D tRNA-Glu 1683928..1684003 Pseudomonas putida HB3267 14291735 B479_t26697 tRNA B479_t26697 NC_019905.1 1711086 1711161 D tRNA-Val 1711086..1711161 Pseudomonas putida HB3267 14287945 B479_t26699 tRNA B479_t26699 NC_019905.1 1711228 1711304 D tRNA-Asp 1711228..1711304 Pseudomonas putida HB3267 14291737 B479_t26701 tRNA B479_t26701 NC_019905.1 1711404 1711480 D tRNA-Asp 1711404..1711480 Pseudomonas putida HB3267 14291738 B479_t26703 tRNA B479_t26703 NC_019905.1 1711621 1711697 D tRNA-Asp 1711621..1711697 Pseudomonas putida HB3267 14291739 B479_t26705 tRNA B479_t26705 NC_019905.1 1845600 1845676 R tRNA-Pro complement(1845600..1845676) Pseudomonas putida HB3267 14288049 B479_t26707 tRNA B479_t26707 NC_019905.1 2032980 2033056 D tRNA-Ile 2032980..2033056 Pseudomonas putida HB3267 14291786 B479_t26709 tRNA B479_t26709 NC_019905.1 2033081 2033156 D tRNA-Ala 2033081..2033156 Pseudomonas putida HB3267 14291742 B479_t26711 tRNA B479_t26711 NC_019905.1 2070113 2070189 D tRNA-Arg 2070113..2070189 Pseudomonas putida HB3267 14288255 B479_t26713 tRNA B479_t26713 NC_019905.1 2070232 2070307 D tRNA-His 2070232..2070307 Pseudomonas putida HB3267 14291744 B479_t26715 tRNA B479_t26715 NC_019905.1 2070360 2070444 D tRNA-Leu 2070360..2070444 Pseudomonas putida HB3267 14291745 B479_t26717 tRNA B479_t26717 NC_019905.1 2070489 2070564 D tRNA-His 2070489..2070564 Pseudomonas putida HB3267 14291746 B479_t26719 tRNA B479_t26719 NC_019905.1 2130400 2130474 D tRNA-Gln 2130400..2130474 Pseudomonas putida HB3267 14288311 B479_t26721 tRNA B479_t26721 NC_019905.1 2214871 2214947 D tRNA-Val 2214871..2214947 Pseudomonas putida HB3267 14288385 B479_t26723 tRNA B479_t26723 NC_019905.1 2215114 2215190 D tRNA-Val 2215114..2215190 Pseudomonas putida HB3267 14291749 B479_t26725 tRNA B479_t26725 NC_019905.1 2234882 2234958 D tRNA-Pro 2234882..2234958 Pseudomonas putida HB3267 14288408 B479_t26727 tRNA B479_t26727 NC_019905.1 3644715 3644799 D tRNA-Leu 3644715..3644799 Pseudomonas putida HB3267 14289688 B479_t26729 tRNA B479_t26729 NC_019905.1 3657557 3657630 R tRNA-Cys complement(3657557..3657630) Pseudomonas putida HB3267 14289707 B479_t26731 tRNA B479_t26731 NC_019905.1 3707269 3707356 R tRNA-Ser complement(3707269..3707356) Pseudomonas putida HB3267 14289767 B479_t26733 tRNA B479_t26733 NC_019905.1 3825017 3825092 R tRNA-Gly complement(3825017..3825092) Pseudomonas putida HB3267 14289864 B479_t26735 tRNA B479_t26735 NC_019905.1 4175808 4175884 R tRNA-Arg complement(4175808..4175884) Pseudomonas putida HB3267 14290173 B479_t26737 tRNA B479_t26737 NC_019905.1 4179317 4179393 R tRNA-Arg complement(4179317..4179393) Pseudomonas putida HB3267 14290176 B479_t26739 tRNA B479_t26739 NC_019905.1 4179466 4179542 R tRNA-Arg complement(4179466..4179542) Pseudomonas putida HB3267 14291757 B479_t26741 tRNA B479_t26741 NC_019905.1 4179614 4179690 R tRNA-Arg complement(4179614..4179690) Pseudomonas putida HB3267 14291758 B479_t26743 tRNA B479_t26743 NC_019905.1 4179797 4179887 R tRNA-Ser complement(4179797..4179887) Pseudomonas putida HB3267 14291759 B479_t26745 tRNA B479_t26745 NC_019905.1 4438036 4438125 R tRNA-Ser complement(4438036..4438125) Pseudomonas putida HB3267 14290421 B479_t26747 tRNA B479_t26747 NC_019905.1 4454306 4454381 R tRNA-Lys complement(4454306..4454381) Pseudomonas putida HB3267 14290435 B479_t26749 tRNA B479_t26749 NC_019905.1 4475869 4475945 D tRNA-Met 4475869..4475945 Pseudomonas putida HB3267 14290459 B479_t26751 tRNA B479_t26751 NC_019905.1 4476079 4476155 D tRNA-Met 4476079..4476155 Pseudomonas putida HB3267 14291763 B479_t26753 tRNA B479_t26753 NC_019905.1 4680340 4680413 D tRNA-Gly 4680340..4680413 Pseudomonas putida HB3267 14290633 B479_t26755 tRNA B479_t26755 NC_019905.1 5002772 5002847 R tRNA-Ala complement(5002772..5002847) Pseudomonas putida HB3267 14291795 B479_t26757 tRNA B479_t26757 NC_019905.1 5002944 5003020 R tRNA-Ile complement(5002944..5003020) Pseudomonas putida HB3267 14291766 B479_t26759 tRNA B479_t26759 NC_019905.1 5053024 5053100 R tRNA-Met complement(5053024..5053100) Pseudomonas putida HB3267 14290963 B479_t26761 tRNA B479_t26761 NC_019905.1 5053201 5053286 R tRNA-Leu complement(5053201..5053286) Pseudomonas putida HB3267 14291768 B479_t26763 tRNA B479_t26763 NC_019905.1 5254318 5254404 D tRNA-Leu 5254318..5254404 Pseudomonas putida HB3267 14291150 B479_t26765 tRNA B479_t26765 NC_019905.1 5254493 5254579 D tRNA-Leu 5254493..5254579 Pseudomonas putida HB3267 14291770 B479_r26783 rRNA B479_r26783 NC_019905.1 246207 247745 D 16S ribosomal RNA 246207..247745 Pseudomonas putida HB3267 14286637 B479_r26797 rRNA B479_r26797 NC_019905.1 248024 250926 D 23S ribosomal RNA 248024..250926 Pseudomonas putida HB3267 14291782 B479_r26767 rRNA B479_r26767 NC_019905.1 251053 251168 D 5S ribosomal RNA 251053..251168 Pseudomonas putida HB3267 14291789 B479_r26785 rRNA B479_r26785 NC_019905.1 251614 253152 D 16S ribosomal RNA 251614..253152 Pseudomonas putida HB3267 14291774 B479_r26799 rRNA B479_r26799 NC_019905.1 253661 256563 D 23S ribosomal RNA 253661..256563 Pseudomonas putida HB3267 14291703 B479_r26769 rRNA B479_r26769 NC_019905.1 256690 256805 D 5S ribosomal RNA 256690..256805 Pseudomonas putida HB3267 14291790 B479_r26771 rRNA B479_r26771 NC_019905.1 256915 257030 D 5S ribosomal RNA 256915..257030 Pseudomonas putida HB3267 14291775 B479_r26787 rRNA B479_r26787 NC_019905.1 626216 627754 D 16S ribosomal RNA 626216..627754 Pseudomonas putida HB3267 14286940 B479_r26801 rRNA B479_r26801 NC_019905.1 628033 630935 D 23S ribosomal RNA 628033..630935 Pseudomonas putida HB3267 14291784 B479_r26773 rRNA B479_r26773 NC_019905.1 631062 631177 D 5S ribosomal RNA 631062..631177 Pseudomonas putida HB3267 14291791 B479_r26789 rRNA B479_r26789 NC_019905.1 801460 802998 D 16S ribosomal RNA 801460..802998 Pseudomonas putida HB3267 14287108 B479_r26803 rRNA B479_r26803 NC_019905.1 803291 806193 D 23S ribosomal RNA 803291..806193 Pseudomonas putida HB3267 14291785 B479_r26775 rRNA B479_r26775 NC_019905.1 806327 806442 D 5S ribosomal RNA 806327..806442 Pseudomonas putida HB3267 14291792 B479_r26791 rRNA B479_r26791 NC_019905.1 2031356 2032894 D 16S ribosomal RNA 2031356..2032894 Pseudomonas putida HB3267 14288227 B479_r26805 rRNA B479_r26805 NC_019905.1 2033400 2036302 D 23S ribosomal RNA 2033400..2036302 Pseudomonas putida HB3267 14291743 B479_r26777 rRNA B479_r26777 NC_019905.1 2036435 2036550 D 5S ribosomal RNA 2036435..2036550 Pseudomonas putida HB3267 14291793 B479_r26779 rRNA B479_r26779 NC_019905.1 4519951 4520066 R 5S ribosomal RNA complement(4519951..4520066) Pseudomonas putida HB3267 14290495 B479_r26807 rRNA B479_r26807 NC_019905.1 4520193 4523095 R 23S ribosomal RNA complement(4520193..4523095) Pseudomonas putida HB3267 14291780 B479_r26793 rRNA B479_r26793 NC_019905.1 4523374 4524912 R 16S ribosomal RNA complement(4523374..4524912) Pseudomonas putida HB3267 14291794 B479_r26781 rRNA B479_r26781 NC_019905.1 4999387 4999502 R 5S ribosomal RNA complement(4999387..4999502) Pseudomonas putida HB3267 14290922 B479_r26809 rRNA B479_r26809 NC_019905.1 4999635 5002537 R 23S ribosomal RNA complement(4999635..5002537) Pseudomonas putida HB3267 14291781 B479_r26795 rRNA B479_r26795 NC_019905.1 5003108 5004646 R 16S ribosomal RNA complement(5003108..5004646) Pseudomonas putida HB3267 14291767