-- dump date 20140619_235403 -- class Genbank::CDS -- table cds_note -- id note YP_007277438.1 PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit YP_007277439.1 PFAM: Polysaccharide biosynthesis protein YP_007277440.1 PFAM: Nucleoside recognition YP_007277441.1 PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_007277444.1 PFAM: Bacterial Ig-like domain (group 3) YP_007277445.1 PFAM: SusD family YP_007277446.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007277447.1 PFAM: Y_Y_Y domain; Two component regulator propeller YP_007277448.1 PFAM: Acyltransferase family YP_007277449.1 manually curated; non-canonical start codon YP_007277451.1 PFAM: CAAX amino terminal protease family YP_007277452.1 PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase YP_007277453.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_007277454.1 PFAM: short chain dehydrogenase YP_007277455.1 PFAM: YCII-related domain YP_007277456.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007277457.1 PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase YP_007277458.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: arginine decarboxylase, biosynthetic YP_007277459.1 PFAM: Shikimate kinase YP_007277460.1 PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial YP_007277461.1 PFAM: Protein of unknown function, DUF417 YP_007277462.1 PFAM: NUDIX domain YP_007277463.1 PFAM: AhpC/TSA family YP_007277465.1 PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; Polyribonucleotide nucleotidyltransferase, RNA binding domain; 3' exoribonuclease family, domain 2; TIGRFAM: polyribonucleotide nucleotidyltransferase YP_007277466.1 PFAM: EamA-like transporter family YP_007277467.1 PFAM: Carbohydrate binding domain YP_007277468.1 PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: nicotinate phosphoribosyltransferase YP_007277475.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain YP_007277476.1 PFAM: pfkB family carbohydrate kinase YP_007277477.1 PFAM: Major Facilitator Superfamily YP_007277478.1 PFAM: Glycosyl hydrolases family 32 C terminal; Glycosyl hydrolases family 32 N-terminal domain YP_007277479.1 PFAM: Glycosyl hydrolases family 32 C terminal; Glycosyl hydrolases family 32 N-terminal domain YP_007277481.1 PFAM: SusD family YP_007277482.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007277483.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; family YP_007277484.1 PFAM: HxlR-like helix-turn-helix YP_007277485.1 PFAM: Cupin domain YP_007277486.1 PFAM: Glycosyl hydrolases family 2, sugar binding domain YP_007277489.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_007277496.1 PFAM: Uncharacterised BCR, YhbC family COG0779 YP_007277497.1 PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA YP_007277498.1 PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2 YP_007277499.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB YP_007277500.1 PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC YP_007277501.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD YP_007277502.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily YP_007277503.1 PFAM: Ribonuclease HII YP_007277505.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007277506.1 PFAM: SusD family YP_007277508.1 PFAM: Protein of unknown function (DUF1703); Predicted AAA-ATPase YP_007277509.1 PFAM: Protein of unknown function (DUF1703); Predicted AAA-ATPase YP_007277510.1 PFAM: Immune inhibitor A peptidase M6; TIGRFAM: M6 family metalloprotease domain YP_007277512.1 PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_007277513.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase YP_007277514.1 PFAM: Protein of unknown function (DUF3109) YP_007277516.1 PFAM: Alpha-L-rhamnosidase N-terminal domain YP_007277519.1 PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit YP_007277520.1 PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20 YP_007277521.1 PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO YP_007277522.1 PFAM: Yqey-like protein YP_007277523.1 PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ YP_007277524.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA YP_007277526.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase YP_007277527.1 PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_007277528.1 PFAM: Cell cycle protein YP_007277529.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_007277530.1 PFAM: Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase YP_007277531.1 PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase YP_007277532.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain YP_007277534.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW YP_007277535.1 PFAM: MraZ protein; TIGRFAM: mraZ protein YP_007277538.1 PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative YP_007277539.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) YP_007277542.1 PFAM: Peptidase family M23 YP_007277543.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain YP_007277545.1 PFAM: Domain of unknown function (DUF1814) YP_007277547.1 PFAM: AMP-binding enzyme YP_007277548.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2 YP_007277550.1 PFAM: CYTH domain YP_007277551.1 PFAM: Sodium:neurotransmitter symporter family YP_007277552.1 PFAM: Sodium:neurotransmitter symporter family YP_007277554.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YP_007277556.1 PFAM: Archaeal ATPase YP_007277557.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_007277558.1 PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein YP_007277559.1 PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase YP_007277560.1 PFAM: Acetokinase family; TIGRFAM: acetate kinase YP_007277561.1 PFAM: pfkB family carbohydrate kinase YP_007277562.1 PFAM: Radical SAM superfamily; TIGRFAM: anaerobic sulfatase-maturating enzyme; radical SAM additional 4Fe4S-binding domain YP_007277564.1 PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein YP_007277565.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc YP_007277566.1 PFAM: Glycosyl transferase family 2 YP_007277567.1 PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P YP_007277568.1 PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type YP_007277569.1 PFAM: PASTA domain YP_007277570.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family YP_007277571.1 PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase YP_007277574.1 PFAM: Beta-eliminating lyase YP_007277575.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YP_007277576.1 TIGRFAM: gamma-glutamyl phosphate reductase YP_007277577.1 PFAM: Amino acid kinase family; PUA domain; TIGRFAM: glutamate 5-kinase YP_007277578.1 PFAM: AMP-binding enzyme YP_007277579.1 PFAM: Cupin domain; Helix-turn-helix YP_007277580.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase YP_007277581.1 PFAM: Aminotransferase class-III YP_007277582.1 PFAM: Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form YP_007277583.1 PFAM: PspC domain YP_007277584.1 PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase YP_007277586.1 PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor YP_007277587.1 PFAM: Glycosyl hydrolases family 28 YP_007277588.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007277589.1 PFAM: SusD family YP_007277590.1 PFAM: Glycosyl hydrolase family 92; Glycerophosphoryl diester phosphodiesterase family; TIGRFAM: alpha-1,2-mannosidase, putative YP_007277591.1 PFAM: Glycosyl hydrolase family 92; Histidine acid phosphatase; TIGRFAM: alpha-1,2-mannosidase, putative YP_007277593.1 PFAM: Uncharacterised protein family UPF0005 YP_007277594.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_007277596.1 PFAM: Protein of unknown function (DUF2795) YP_007277597.1 PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; manually curated YP_007277598.1 PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldK YP_007277599.1 TIGRFAM: gliding motility-associated protein GldL YP_007277600.1 PFAM: GldM C-terminal domain; GldM N-terminal domain; TIGRFAM: gliding motility-associated protein GldM YP_007277601.1 TIGRFAM: gliding motility associated protien GldN YP_007277603.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N' YP_007277604.1 PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX) YP_007277606.1 PFAM: 7TM-HD extracellular; HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG YP_007277607.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family YP_007277608.1 PFAM: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) YP_007277609.1 PFAM: Aminotransferase class I and II YP_007277610.1 PFAM: Protein of unknown function (DUF3737) YP_007277612.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1 YP_007277613.1 PFAM: FecR protein YP_007277614.1 PFAM: TonB-dependent Receptor Plug Domain YP_007277615.1 PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain YP_007277616.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain YP_007277617.1 PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21 YP_007277618.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC YP_007277619.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein YP_007277620.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_007277621.1 PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial YP_007277622.1 PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; manually curated YP_007277623.1 PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11 YP_007277624.1 PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast YP_007277625.1 PFAM: Ribosomal protein L10 YP_007277626.1 PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12 YP_007277627.1 PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit YP_007277628.1 PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form YP_007277631.1 PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: cytochrome c nitrate reductase, small subunit YP_007277632.1 PFAM: Cytochrome c552 YP_007277633.1 PFAM: ResB-like family YP_007277634.1 PFAM: Cytochrome C assembly protein YP_007277640.1 PFAM: F5/8 type C domain; Glycosyl hydrolases family 35 YP_007277643.1 PFAM: Protein of unknown function (DUF3467) YP_007277645.1 PFAM: PIN domain YP_007277646.1 PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle YP_007277647.1 PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle YP_007277648.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_007277649.1 PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle YP_007277650.1 PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial YP_007277651.1 PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle YP_007277652.1 PFAM: Ribosomal protein L23 YP_007277653.1 PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; manually curated YP_007277654.1 PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle YP_007277655.1 PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type YP_007277656.1 PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type YP_007277657.1 PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle YP_007277658.1 PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29 YP_007277659.1 PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17 YP_007277660.1 PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle YP_007277661.1 PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle YP_007277662.1 PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5 YP_007277663.1 PFAM: Ribosomal protein S14p/S29e YP_007277664.1 PFAM: Ribosomal protein S8 YP_007277665.1 PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type YP_007277666.1 PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type YP_007277667.1 PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type YP_007277668.1 PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle YP_007277669.1 PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle YP_007277670.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit YP_007277671.1 PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_007277672.1 PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1 YP_007277673.1 PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; manually curated YP_007277674.1 PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13 YP_007277675.1 PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11 YP_007277676.1 PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type YP_007277677.1 PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type YP_007277678.1 PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17 YP_007277680.1 PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; TIGRFAM: rare lipoprotein A; manually curated YP_007277681.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YP_007277685.1 PFAM: Pyruvate phosphate dikinase, PEP/pyruvate binding domain YP_007277686.1 PFAM: MutS domain V YP_007277687.1 PFAM: Major Facilitator Superfamily YP_007277689.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist YP_007277691.1 PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related YP_007277692.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase YP_007277693.1 PFAM: Adenylate kinase; TIGRFAM: adenylate kinases YP_007277694.1 PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA YP_007277695.1 PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family YP_007277696.1 PFAM: Peptidase family M23 YP_007277698.1 PFAM: AICARFT/IMPCHase bienzyme YP_007277699.1 manually curated YP_007277700.1 PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type YP_007277701.1 PFAM: 5'-nucleotidase, C-terminal domain YP_007277702.1 PFAM: Calcineurin-like phosphoesterase YP_007277705.1 PFAM: Tetratricopeptide repeat YP_007277707.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_007277708.1 PFAM: Biopolymer transport protein ExbD/TolR YP_007277709.1 PFAM: Biopolymer transport protein ExbD/TolR YP_007277710.1 PFAM: MotA/TolQ/ExbB proton channel family YP_007277711.1 PFAM: Aminotransferase class I and II YP_007277712.1 PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_007277713.1 PFAM: Predicted permease YjgP/YjgQ family YP_007277714.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family YP_007277715.1 PFAM: rod shape-determining protein MreC YP_007277716.1 TIGRFAM: rod shape-determining protein MreD YP_007277717.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2 YP_007277718.1 PFAM: Cell cycle protein YP_007277720.1 TIGRFAM: gliding motility-associated lipoprotein GldH YP_007277721.1 PFAM: PSP1 C-terminal conserved region YP_007277723.1 PFAM: Methylenetetrahydrofolate reductase YP_007277724.1 PFAM: Protein of unknown function, DUF488 YP_007277725.1 PFAM: Cyclic nucleotide-binding domain YP_007277726.1 PFAM: haloacid dehalogenase-like hydrolase YP_007277727.1 PFAM: Domain of Unknown Function (DUF349) YP_007277728.1 PFAM: CorA-like Mg2+ transporter protein YP_007277729.1 PFAM: AcrB/AcrD/AcrF family YP_007277730.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007277731.1 PFAM: Outer membrane efflux protein YP_007277733.1 PFAM: SusD family YP_007277734.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007277736.1 PFAM: Peptidase family M20/M25/M40; TIGRFAM: Xaa-His dipeptidase YP_007277737.1 PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein YP_007277739.1 PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase YP_007277740.1 PFAM: GAF domain YP_007277741.1 PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor YP_007277742.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A YP_007277743.1 PFAM: DNA/RNA non-specific endonuclease YP_007277744.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31 YP_007277748.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_007277750.1 PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: uridine kinase YP_007277752.1 PFAM: Restriction endonuclease EcoRV YP_007277753.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam) YP_007277754.1 PFAM: Phosphoglycerate mutase family YP_007277756.1 PFAM: SusD family YP_007277757.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007277758.1 PFAM: Bacterial regulatory proteins, lacI family YP_007277761.1 PFAM: Bacterial sugar transferase YP_007277762.1 PFAM: Glycosyl transferase family 4 YP_007277763.1 PFAM: Glycosyl transferase family 2 YP_007277764.1 PFAM: Glycosyl transferases group 1 YP_007277765.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase YP_007277766.1 PFAM: Glycosyl transferases group 1 YP_007277770.1 PFAM: Aminoglycoside 3-N-acetyltransferase YP_007277771.1 PFAM: Chain length determinant protein YP_007277772.1 PFAM: SLBB-domain like (DUF1017); Polysaccharide biosynthesis/export protein; SLBB domain YP_007277773.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_007277774.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_007277775.1 PFAM: Methyltransferase domain YP_007277777.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007277778.1 PFAM: Radical SAM superfamily YP_007277779.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_007277781.1 TIGRFAM: Por secretion system C-terminal sorting domain YP_007277784.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; manually curated YP_007277787.1 PFAM: Methyltransferase domain YP_007277788.1 PFAM: Pregnancy-associated plasma protein-A; TIGRFAM: zinc-dependent metalloproteinase lipoprotein, BF0631 family YP_007277789.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase YP_007277792.1 PFAM: PglZ domain; Response regulator receiver domain YP_007277793.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase YP_007277794.1 PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor-related protein YP_007277795.1 PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_007277796.1 PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family YP_007277797.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_007277798.1 PFAM: Gram-negative bacterial tonB protein YP_007277801.1 PFAM: Glycogen synthase YP_007277802.1 PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases YP_007277803.1 PFAM: Y_Y_Y domain; Two component regulator propeller YP_007277804.1 PFAM: Alginate lyase YP_007277805.1 PFAM: Bacterial alpha-L-rhamnosidase; Alpha-L-rhamnosidase N-terminal domain YP_007277806.1 PFAM: AhpC/TSA family YP_007277807.1 PFAM: AhpC/TSA family YP_007277808.1 PFAM: AhpC/TSA family YP_007277809.1 PFAM: Phosphoglycerate kinase YP_007277810.1 PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC YP_007277811.1 PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA YP_007277812.1 PFAM: NMT1/THI5 like YP_007277814.1 PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; Rho termination factor, RNA-binding domain; TIGRFAM: transcription termination factor Rho YP_007277815.1 PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1 YP_007277817.1 PFAM: Na(+)-translocating NADH-quinone reductase subunit A (NQRA); NQRA C-terminal domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit YP_007277818.1 PFAM: NQR2, RnfD, RnfE family; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit YP_007277819.1 PFAM: FMN-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit YP_007277820.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit YP_007277821.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit YP_007277822.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit YP_007277823.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase YP_007277825.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: carboxynorspermidine decarboxylase YP_007277827.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_007277828.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; TIGRFAM: gliding motility-associated protein GldE YP_007277832.1 PFAM: Transglutaminase-like superfamily YP_007277834.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme YP_007277835.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007277836.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase YP_007277837.1 PFAM: Glutathione peroxidase YP_007277841.1 PFAM: Domain of unknown function (DUF718); TIGRFAM: L-rhamnose 1-epimerase; manually curated YP_007277842.1 PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC YP_007277843.1 PFAM: TonB-dependent Receptor Plug Domain YP_007277844.1 PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase YP_007277845.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II YP_007277846.1 PFAM: Exonuclease VII small subunit YP_007277847.1 PFAM: Exonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit YP_007277848.1 PFAM: Subtilase family; manually curated YP_007277849.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_007277852.1 PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylglycinamide formyltransferase 2 YP_007277853.1 PFAM: WxcM-like, C-terminal YP_007277855.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_007277859.1 PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid YP_007277863.1 PFAM: Outer membrane efflux protein YP_007277865.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_007277866.1 PFAM: Domain of unknown function (DUF477) YP_007277867.1 PFAM: LemA family YP_007277868.1 PFAM: Transglycosylase SLT domain YP_007277869.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_007277871.1 PFAM: DHH family; DHHA1 domain YP_007277873.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase YP_007277874.1 PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family YP_007277875.1 PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit YP_007277877.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase YP_007277881.1 PFAM: NUDIX domain YP_007277882.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007277883.1 PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA YP_007277884.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase YP_007277885.1 PFAM: Aspartate-ammonia ligase; TIGRFAM: aspartate--ammonia ligase, AsnA-type YP_007277886.1 PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau YP_007277887.1 PFAM: Septum formation initiator YP_007277890.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type YP_007277891.1 PFAM: Vitamin B12 dependent methionine synthase, activation domain YP_007277893.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_007277894.1 PFAM: Glycosyl transferase family 2 YP_007277895.1 PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd) YP_007277896.1 PFAM: Major Facilitator Superfamily; manually curated YP_007277897.1 PFAM: Major Facilitator Superfamily YP_007277898.1 PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat YP_007277899.1 PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain YP_007277900.1 PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase YP_007277901.1 PFAM: Protein of unknown function (DUF3078) YP_007277902.1 PFAM: TonB-dependent Receptor Plug Domain YP_007277904.1 PFAM: Nitroreductase family YP_007277905.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family YP_007277906.1 PFAM: Maf-like protein; TIGRFAM: MAF protein YP_007277907.1 PFAM: Sulfatase YP_007277908.1 PFAM: Major Facilitator Superfamily YP_007277910.1 PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative YP_007277911.1 PFAM: Polysaccharide deacetylase YP_007277912.1 PFAM: Protein of unknown function (DUF2723) YP_007277913.1 PFAM: Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_007277914.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain YP_007277915.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB YP_007277919.1 PFAM: Protein of unknown function (DUF1044) YP_007277922.1 PFAM: Protein of unknown function (DUF1460) YP_007277924.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_007277925.1 PFAM: Uncharacterised BCR, COG1649 YP_007277927.1 PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain YP_007277928.1 PFAM: Bacterial regulatory proteins, tetR family YP_007277929.1 PFAM: AMP-binding enzyme YP_007277930.1 PFAM: AMP-binding enzyme YP_007277931.1 PFAM: Predicted permease YP_007277932.1 PFAM: Aminotransferase class I and II YP_007277933.1 PFAM: Cyclic nucleotide-binding domain; manually curated YP_007277934.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain YP_007277936.1 PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; manually curated YP_007277937.1 PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial YP_007277938.1 PFAM: UPF0126 domain YP_007277939.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_007277940.1 PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA) YP_007277942.1 PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_007277943.1 PFAM: FabA-like domain; UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ YP_007277944.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YP_007277945.1 PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase YP_007277946.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase YP_007277947.1 PFAM: Ferric uptake regulator family YP_007277949.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_007277950.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase YP_007277951.1 PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase YP_007277952.1 PFAM: Ferric uptake regulator family YP_007277953.1 PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family YP_007277955.1 PFAM: Initiator Replication protein YP_007277956.1 PFAM: Uncharacterized protein family UPF0029; TIGRFAM: uncharacterized protein, YigZ family YP_007277957.1 PFAM: Protein of unknown function (DUF1015) YP_007277958.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_007277959.1 PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase YP_007277960.1 PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase YP_007277965.1 PFAM: SusD family YP_007277966.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; manually curated YP_007277972.1 PFAM: 5'-nucleotidase, C-terminal domain; Calcineurin-like phosphoesterase YP_007277973.1 PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain YP_007277974.1 PFAM: Permease family YP_007277975.1 PFAM: Predicted Permease Membrane Region; TrkA-C domain; TIGRFAM: AspT/YidE/YbjL antiporter duplication domain YP_007277978.1 PFAM: FHA domain YP_007277979.1 PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase YP_007277980.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_007277981.1 PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_007277982.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit YP_007277983.1 PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase YP_007277984.1 PFAM: ABC transporter YP_007277985.1 PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase YP_007277986.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase YP_007277989.1 PFAM: Firmicute fructose-1,6-bisphosphatase YP_007277990.1 PFAM: Protein of unknown function (DUF3127) YP_007277991.1 PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit YP_007277992.1 PFAM: Exonuclease YP_007277994.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN YP_007277998.1 PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase YP_007277999.1 PFAM: Bacterial DNA-binding protein YP_007278000.1 PFAM: Bacterial DNA-binding protein YP_007278001.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family YP_007278002.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY YP_007278003.1 PFAM: UvrD/REP helicase YP_007278005.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif YP_007278007.1 PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin component, YafQ family; addiction module toxin, RelE/StbE family YP_007278011.1 PFAM: FeoA domain; Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain YP_007278014.1 PFAM: PhoH-like protein YP_007278015.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_007278016.1 PFAM: Shikimate dehydrogenase substrate binding domain; TIGRFAM: shikimate 5-dehydrogenase YP_007278017.1 PFAM: AIR synthase related protein, C-terminal domain YP_007278018.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1 YP_007278019.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2 YP_007278022.1 PFAM: Protein of unknown function (DUF2582) YP_007278023.1 PFAM: Acetyltransferase (GNAT) family YP_007278024.1 PFAM: Glycosyl transferase family 2 YP_007278026.1 PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR YP_007278028.1 PFAM: Carbon starvation protein CstA YP_007278029.1 PFAM: Uncharacterised BCR, COG1649 YP_007278030.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric YP_007278032.1 manually curated YP_007278033.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_007278034.1 PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB YP_007278035.1 PFAM: Metallo-beta-lactamase superfamily YP_007278036.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC YP_007278037.1 PFAM: ABC transporter YP_007278038.1 PFAM: 3'-5' exonuclease YP_007278039.1 PFAM: S-adenosylmethionine-dependent methyltransferase YP_007278040.1 PFAM: TilS substrate C-terminal domain; PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain YP_007278042.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family YP_007278046.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_007278048.1 PFAM: ABC transporter YP_007278050.1 PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family YP_007278051.1 PFAM: UvrB/uvrC motif YP_007278052.1 PFAM: Nucleoside H+ symporter; TIGRFAM: nucleoside transporter YP_007278055.1 PFAM: Protein of unknown function (DUF3256) YP_007278056.1 PFAM: Transglycosylase SLT domain YP_007278057.1 PFAM: HisG, C-terminal domain; ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, C-terminal domain; ATP phosphoribosyltransferase YP_007278058.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase YP_007278059.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_007278061.1 PFAM: Alpha amylase, C-terminal all-beta domain; Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YP_007278062.1 PFAM: Domain of unknown function (DUF386); TIGRFAM: uncharacterized protein, YhcH/YjgK/YiaL family YP_007278063.1 PFAM: MORN repeat YP_007278064.1 PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_007278065.1 PFAM: DnaJ domain; DnaJ C terminal region YP_007278066.1 PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16 YP_007278068.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_007278069.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit YP_007278070.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit YP_007278071.1 PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit YP_007278072.1 PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit YP_007278073.1 PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit YP_007278074.1 PFAM: Putative Fe-S cluster; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit YP_007278075.1 PFAM: Positive regulator of sigma(E), RseC/MucC YP_007278077.1 PFAM: OmpA family YP_007278079.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007278080.1 PFAM: Putative glycosyl hydrolase of unknown function (DUF1680) YP_007278082.1 PFAM: Deoxynucleoside kinase YP_007278083.1 PFAM: Deoxynucleoside kinase YP_007278084.1 PFAM: Protein kinase domain YP_007278088.1 PFAM: Histidine acid phosphatase YP_007278089.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase YP_007278090.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_007278091.1 PFAM: Flavodoxin; Metallo-beta-lactamase superfamily YP_007278092.1 PFAM: Rubredoxin YP_007278095.1 PFAM: ABC transporter; TIGRFAM: putative bacteriocin export ABC transporter, lactococcin 972 group YP_007278096.1 PFAM: Predicted permease YP_007278097.1 PFAM: Predicted permease YP_007278099.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007278100.1 PFAM: Outer membrane efflux protein YP_007278101.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_007278102.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007278107.1 PFAM: Protein of unknown function (DUF1044) YP_007278109.1 PFAM: AMP-binding enzyme YP_007278111.1 TIGRFAM: TIGR02646 family protein YP_007278113.1 PFAM: SpoU rRNA Methylase family YP_007278114.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_007278116.1 PFAM: CrcB-like protein; TIGRFAM: protein CrcB YP_007278119.1 PFAM: Rubrerythrin YP_007278120.1 PFAM: Glycosyl transferase family 2 YP_007278121.1 PFAM: Major Facilitator Superfamily YP_007278122.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family YP_007278123.1 PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase YP_007278124.1 PFAM: MaoC like domain YP_007278126.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1 YP_007278127.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase YP_007278128.1 PFAM: FMN-binding domain YP_007278129.1 PFAM: Nitroreductase family YP_007278131.1 PFAM: CAAX amino terminal protease family YP_007278132.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase YP_007278133.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase YP_007278134.1 PFAM: Aspartate carbamoyltransferase regulatory chain, metal binding domain; Aspartate carbamoyltransferase regulatory chain, allosteric domain; TIGRFAM: aspartate carbamoyltransferase, regulatory subunit YP_007278135.1 PFAM: Serine hydroxymethyltransferase YP_007278137.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein YP_007278138.1 PFAM: Pterin binding enzyme; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; manually curated YP_007278139.1 PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_007278140.1 PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family YP_007278141.1 PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain; manually curated YP_007278142.1 PFAM: Glutathione peroxidase YP_007278143.1 PFAM: MarR family YP_007278144.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family YP_007278145.1 PFAM: Glycosyl transferase family 2 YP_007278146.1 PFAM: HD domain YP_007278147.1 PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_007278148.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase YP_007278149.1 PFAM: LeuA allosteric (dimerisation) domain; HMGL-like YP_007278150.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit YP_007278151.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit YP_007278152.1 PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type YP_007278153.1 PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase YP_007278154.1 PFAM: GHMP kinases C terminal; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_007278156.1 PFAM: OmpA family YP_007278157.1 PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase YP_007278158.1 PFAM: FecCD transport family YP_007278159.1 PFAM: Periplasmic binding protein YP_007278161.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_007278162.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007278163.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_007278164.1 PFAM: D-mannonate dehydratase (UxuA); TIGRFAM: mannonate dehydratase YP_007278165.1 PFAM: short chain dehydrogenase YP_007278166.1 PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain YP_007278167.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YP_007278168.1 PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase YP_007278169.1 PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family YP_007278170.1 PFAM: Methyltransferase small domain YP_007278171.1 PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La YP_007278172.1 PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming YP_007278173.1 PFAM: Predicted permease YjgP/YjgQ family YP_007278174.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_007278179.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: DNA-binding protein, histone-like, putative YP_007278181.1 PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric YP_007278182.1 PFAM: Patatin-like phospholipase YP_007278183.1 PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24 YP_007278184.1 PFAM: Peptidase C1-like family YP_007278185.1 PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ YP_007278186.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family YP_007278187.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase YP_007278188.1 PFAM: Acyl-ACP thioesterase YP_007278189.1 PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit YP_007278190.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_007278191.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_007278192.1 PFAM: OmpA family YP_007278193.1 PFAM: Alpha-L-arabinofuranosidase C-terminus YP_007278194.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_007278195.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein YP_007278196.1 PFAM: Prephenate dehydrogenase YP_007278197.1 PFAM: Chorismate mutase type II; DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_007278198.1 PFAM: Aminotransferase class I and II YP_007278199.1 PFAM: Prephenate dehydratase YP_007278205.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_007278206.1 PFAM: Heavy-metal-associated domain YP_007278207.1 TIGRFAM: YD repeat (two copies) YP_007278209.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_007278210.1 PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase YP_007278211.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_007278213.1 PFAM: SPFH domain / Band 7 family YP_007278214.1 PFAM: NfeD-like YP_007278215.1 PFAM: Peptidase family M48 YP_007278216.1 PFAM: Carbon-nitrogen hydrolase YP_007278217.1 PFAM: domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit YP_007278218.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit YP_007278219.1 PFAM: Aminotransferase class I and II YP_007278220.1 PFAM: AMP-binding enzyme YP_007278222.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; phenylacetic acid degradation protein PaaD YP_007278224.1 TIGRFAM: conserved hypothetical protein (putative transposase or invertase) YP_007278225.1 PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family YP_007278226.1 PFAM: Putative zinc ribbon domain YP_007278227.1 PFAM: DnaJ domain; Tellurite resistance protein TerB YP_007278230.1 PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit YP_007278231.1 PFAM: Helix-turn-helix YP_007278232.1 PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain YP_007278233.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein YP_007278234.1 PFAM: Glycosyl hydrolases family 43 YP_007278235.1 PFAM: Chorismate synthase; TIGRFAM: chorismate synthase YP_007278236.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_007278237.1 manually curated YP_007278238.1 PFAM: Flavodoxin; TIGRFAM: flavodoxin, long chain YP_007278239.1 PFAM: Protein of unknown function (DUF2023) YP_007278240.1 PFAM: F5/8 type C domain; Glycosyl hydrolase family 20, catalytic domain YP_007278243.1 PFAM: Major Facilitator Superfamily YP_007278244.1 PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain YP_007278245.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_007278246.1 PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase YP_007278248.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA YP_007278249.1 PFAM: Uncharacterised protein family (UPF0104) YP_007278250.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_007278253.1 PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit YP_007278255.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_007278258.1 PFAM: Uncharacterized lipoprotein NlpE involved in copper resistance YP_007278261.1 PFAM: Flavin containing amine oxidoreductase; TIGRFAM: protoporphyrinogen oxidase YP_007278262.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein YP_007278263.1 PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_007278264.1 PFAM: Cytidylyltransferase family YP_007278265.1 PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase YP_007278266.1 PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE YP_007278267.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007278268.1 PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins YP_007278270.1 PFAM: Transglycosylase SLT domain; LysM domain YP_007278271.1 PFAM: HD domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_007278272.1 PFAM: Pectinesterase YP_007278273.1 PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Pectinesterase YP_007278275.1 PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase YP_007278277.1 PFAM: Calcineurin-like phosphoesterase YP_007278278.1 PFAM: SprT-like family YP_007278282.1 PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family YP_007278283.1 PFAM: Phospholipase D Active site motif YP_007278285.1 PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core YP_007278286.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_007278287.1 PFAM: Electron transfer flavoprotein domain YP_007278288.1 PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain YP_007278289.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase C terminal; Acyl-CoA dehydrogenase, N-terminal domain YP_007278290.1 PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form YP_007278292.1 PFAM: Helicase; PIF1 helicase YP_007278293.1 PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein YP_007278294.1 PFAM: Plasmid maintenance system killer protein YP_007278295.1 PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family YP_007278296.1 PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein YP_007278297.1 PFAM: LrgA family YP_007278299.1 PFAM: Mechanosensitive ion channel YP_007278300.1 PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family YP_007278301.1 PFAM: Protein of unknown function (DUF1200) YP_007278304.1 PFAM: KilA-N domain YP_007278306.1 PFAM: Plasmid recombination enzyme YP_007278309.1 PFAM: Virulence-associated protein E YP_007278313.1 PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200 YP_007278315.1 PFAM: Phage integrase family YP_007278316.1 PFAM: Phage integrase family YP_007278318.1 TIGRFAM: putative toxin-antitoxin system toxin component, PIN family YP_007278321.1 PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit YP_007278322.1 PFAM: Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: diaminopimelate dehydrogenase YP_007278323.1 PFAM: Calcineurin-like phosphoesterase YP_007278324.1 PFAM: FMN-binding domain YP_007278325.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_007278326.1 PFAM: Peptidase C1-like family YP_007278327.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase YP_007278328.1 PFAM: TrkA-N domain; TrkA-C domain YP_007278329.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_007278330.1 PFAM: Formate--tetrahydrofolate ligase YP_007278331.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA YP_007278332.1 PFAM: Saccharopine dehydrogenase YP_007278335.1 PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: rhamnulose-1-phosphate aldolase YP_007278336.1 PFAM: Polysaccharide deacetylase YP_007278337.1 PFAM: SusD family YP_007278338.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007278339.1 PFAM: SusD family YP_007278340.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007278341.1 PFAM: L-rhamnose-proton symport protein (RhaT) YP_007278342.1 PFAM: L-rhamnose isomerase (RhaA); TIGRFAM: L-rhamnose isomerase YP_007278343.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: rhamnulokinase YP_007278344.1 PFAM: Citrate transporter YP_007278345.1 PFAM: AraC-like ligand binding domain YP_007278346.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases YP_007278350.1 PFAM: EamA-like transporter family YP_007278353.1 PFAM: ZIP Zinc transporter YP_007278354.1 PFAM: Transcriptional regulatory protein, C terminal YP_007278356.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK YP_007278363.1 PFAM: Fic/DOC family YP_007278368.1 PFAM: SusD family YP_007278369.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007278370.1 PFAM: CAAX amino terminal protease family YP_007278371.1 PFAM: Peptidase family M13 YP_007278372.1 PFAM: F5/8 type C domain; Alpha-L-fucosidase YP_007278373.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_007278374.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type YP_007278375.1 PFAM: AMP-binding enzyme; TIGRFAM: amino acid adenylation domain YP_007278376.1 PFAM: Phosphopantetheine attachment site YP_007278377.1 PFAM: MBOAT family YP_007278379.1 PFAM: DNA gyrase/topoisomerase IV, subunit A YP_007278381.1 PFAM: Peptidase family S41 YP_007278382.1 PFAM: Tex-like protein N-terminal domain YP_007278383.1 PFAM: S1 RNA binding domain YP_007278384.1 PFAM: Beta-galactosidase YP_007278386.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-linked outer membrane protein, SusC/RagA family YP_007278387.1 PFAM: Fasciclin domain YP_007278388.1 PFAM: Fasciclin domain YP_007278389.1 PFAM: SusD family YP_007278390.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007278393.1 PFAM: F5/8 type C domain; Glycosyl hydrolases family 43 YP_007278396.1 PFAM: Putative glycosyl hydrolase of unknown function (DUF1680) YP_007278398.1 PFAM: Y_Y_Y domain; Two component regulator propeller; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain YP_007278399.1 PFAM: Putative glycosyl hydrolase of unknown function (DUF1680) YP_007278400.1 PFAM: Domain of unknown function (DUF303) YP_007278402.1 PFAM: Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2 YP_007278403.1 PFAM: BNR/Asp-box repeat YP_007278404.1 PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) YP_007278405.1 PFAM: Dihydrodipicolinate synthetase family YP_007278406.1 PFAM: Major Facilitator Superfamily YP_007278407.1 PFAM: Kelch motif; TIGRFAM: cyclically-permuted mutatrotase family protein YP_007278408.1 PFAM: Creatinine amidohydrolase YP_007278409.1 PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Beta galactosidase small chain; Glycosyl hydrolases family 2, sugar binding domain YP_007278411.1 TIGRFAM: Por secretion system C-terminal sorting domain YP_007278412.1 PFAM: Glycosyl hydrolase family 85 YP_007278414.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007278415.1 PFAM: Glycosyl hydrolase family 85; TIGRFAM: Por secretion system C-terminal sorting domain YP_007278416.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1 YP_007278417.1 PFAM: FecR protein YP_007278418.1 PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase YP_007278419.1 PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; GlcNAc-PI de-N-acetylase; TIGRFAM: glucosamine-6-phosphate isomerase YP_007278420.1 PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative YP_007278421.1 PFAM: Major Facilitator Superfamily YP_007278422.1 PFAM: Domain of unknown function (DUF377) YP_007278423.1 PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative YP_007278424.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_007278425.1 PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain YP_007278426.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) YP_007278427.1 PFAM: Sodium/hydrogen exchanger family YP_007278428.1 PFAM: ABC transporter YP_007278430.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase YP_007278431.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase YP_007278432.1 PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase YP_007278433.1 PFAM: Mycoplasma protein of unknown function, DUF285; TIGRFAM: bacterial surface protein 26-residue repeat YP_007278434.1 PFAM: OmpA family YP_007278435.1 PFAM: MutL C terminal dimerisation domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL YP_007278438.1 PFAM: PPIC-type PPIASE domain YP_007278439.1 PFAM: PPIC-type PPIASE domain YP_007278440.1 PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; manually curated YP_007278441.1 PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family YP_007278442.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) YP_007278443.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_007278444.1 PFAM: Bacterial trigger factor protein (TF); TIGRFAM: trigger factor YP_007278445.1 PFAM: FaeA-like protein; Divergent AAA domain YP_007278446.1 PFAM: ABC transporter YP_007278447.1 PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein YP_007278448.1 PFAM: Protein of unknown function (DUF559) YP_007278449.1 PFAM: ABC transporter YP_007278451.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain YP_007278452.1 PFAM: KH domain; Ferrous iron transport protein B; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain YP_007278453.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_007278454.1 PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32 YP_007278455.1 PFAM: Uncharacterized ACR, COG1399 YP_007278456.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; manually curated YP_007278457.1 PFAM: Protein of unknown function (DUF1812) YP_007278459.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase YP_007278460.1 PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179) YP_007278462.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, eukaryotic type YP_007278463.1 PFAM: OmpA family YP_007278464.1 PFAM: Glycosyl hydrolases family 43 YP_007278465.1 PFAM: Chromate transporter YP_007278466.1 PFAM: Chromate transporter YP_007278467.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form YP_007278468.1 PFAM: Cyclomaltodextrinase, N-terminal; Alpha amylase, catalytic domain; Cyclo-malto-dextrinase C-terminal domain YP_007278469.1 PFAM: Alpha amylase, catalytic domain; TIGRFAM: pullulanase, type I YP_007278470.1 PFAM: Glycoside hydrolase 97 YP_007278471.1 PFAM: Starch binding domain; 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase YP_007278472.1 PFAM: PAP2 superfamily YP_007278473.1 PFAM: MgtC family YP_007278474.1 PFAM: Major Facilitator Superfamily YP_007278475.1 PFAM: S23 ribosomal protein; TIGRFAM: TIGR02436 family protein YP_007278476.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007278477.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007278478.1 PFAM: SusD family YP_007278481.1 PFAM: Alpha amylase, catalytic domain YP_007278482.1 PFAM: Glycosyl hydrolase family 53 YP_007278483.1 PFAM: S23 ribosomal protein YP_007278484.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_007278485.1 PFAM: Predicted permease YP_007278486.1 PFAM: Predicted permease YP_007278487.1 PFAM: ABC transporter YP_007278488.1 PFAM: AhpC/TSA family YP_007278489.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_007278490.1 PFAM: ATP-NAD kinase YP_007278491.1 PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family YP_007278492.1 PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein YP_007278493.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_007278494.1 PFAM: Helicase conserved C-terminal domain; OB-fold nucleic acid binding domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG YP_007278496.1 PFAM: Peptidase family M23; LysM domain YP_007278497.1 PFAM: Glycosyl transferase family 2 YP_007278498.1 PFAM: Glycosyl transferases group 1 YP_007278499.1 PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_007278501.1 PFAM: Peptidase family C25 YP_007278502.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_007278503.1 PFAM: Subtilase family YP_007278504.1 PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts YP_007278505.1 PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type YP_007278506.1 PFAM: Ribosomal protein S9/S16 YP_007278507.1 PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type YP_007278509.1 PFAM: Polysaccharide biosynthesis protein YP_007278510.1 PFAM: Core-2/I-Branching enzyme YP_007278511.1 PFAM: Glycosyl Hydrolase Family 88 YP_007278512.1 PFAM: Glycosyl hydrolases family 43 YP_007278513.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007278514.1 PFAM: SusD family YP_007278515.1 PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Beta galactosidase small chain YP_007278516.1 PFAM: Glycosyl hydrolases family 2, sugar binding domain YP_007278517.1 PFAM: Carbohydrate binding domain; Alpha-L-arabinofuranosidase C-terminus YP_007278520.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal YP_007278523.1 PFAM: short chain dehydrogenase YP_007278525.1 PFAM: Sodium Bile acid symporter family YP_007278527.1 PFAM: Peptidase family M50; TIGRFAM: RIP metalloprotease RseP YP_007278528.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_007278529.1 PFAM: RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM YP_007278530.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_007278532.1 PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ YP_007278533.1 PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein YP_007278534.1 PFAM: Guanylate kinase; TIGRFAM: guanylate kinase YP_007278535.1 PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain YP_007278536.1 PFAM: Sulfatase YP_007278537.1 PFAM: Acyltransferase family YP_007278538.1 PFAM: Acyltransferase family YP_007278539.1 PFAM: UbiA prenyltransferase family YP_007278540.1 TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like YP_007278541.1 PFAM: GtrA-like protein YP_007278546.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_007278547.1 PFAM: Thymidylate synthase complementing protein YP_007278548.1 PFAM: Ferric uptake regulator family YP_007278549.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; TIGRFAM: A/G-specific adenine glycosylase YP_007278550.1 PFAM: tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase YP_007278554.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_007278555.1 PFAM: Uncharacterised protein family (UPF0227) YP_007278556.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_007278557.1 PFAM: NAD dependent epimerase/dehydratase family YP_007278558.1 PFAM: LICD Protein Family YP_007278561.1 PFAM: Cytochrome C biogenesis protein transmembrane region; Protein of unknown function, DUF255 YP_007278562.1 PFAM: Serine dehydratase alpha chain YP_007278563.1 PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin biosynthesis protein RibD YP_007278564.1 PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific YP_007278565.1 PFAM: RecX family YP_007278566.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein YP_007278567.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase YP_007278568.1 PFAM: Polyketide cyclase / dehydrase and lipid transport YP_007278569.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase YP_007278572.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA YP_007278573.1 PFAM: HIT domain YP_007278574.1 PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_007278576.1 PFAM: Phosphomethylpyrimidine kinase YP_007278577.1 PFAM: Predicted Permease Membrane Region; TrkA-C domain; TIGRFAM: AspT/YidE/YbjL antiporter duplication domain YP_007278580.1 manually curated YP_007278581.1 PFAM: DNA methylase YP_007278582.1 PFAM: N-6 DNA Methylase YP_007278585.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_007278586.1 PFAM: pfkB family carbohydrate kinase YP_007278587.1 PFAM: ABC transporter YP_007278589.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2264) YP_007278590.1 PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein YP_007278591.1 PFAM: AhpC/TSA family YP_007278596.1 PFAM: Sulfatase YP_007278597.1 PFAM: Glycosyl Hydrolase Family 88 YP_007278598.1 PFAM: Lyase, N terminal; Lyase, catalytic; Polysaccharide lyase family 8, super-sandwich domain YP_007278600.1 PFAM: SusD family YP_007278601.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007278602.1 PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two component regulator propeller; His Kinase A (phosphoacceptor) domain YP_007278604.1 TIGRFAM: addiction module toxin component, YafQ family; addiction module toxin, RelE/StbE family YP_007278606.1 PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family YP_007278608.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_007278609.1 PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179) YP_007278610.1 PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase YP_007278611.1 PFAM: RNase H YP_007278614.1 PFAM: Domain of unknown function (DUF1893) YP_007278616.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007278617.1 PFAM: SusD family YP_007278619.1 PFAM: Fibrobacter succinogenes major domain (Fib_succ_major); TIGRFAM: Fibrobacter succinogenes major paralogous domain YP_007278622.1 PFAM: AhpC/TSA family YP_007278623.1 PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain; TIGR00341 family protein YP_007278624.1 PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA YP_007278625.1 PFAM: ACT domain YP_007278626.1 PFAM: AMP-binding enzyme YP_007278627.1 PFAM: Na+/Pi-cotransporter; PhoU domain; TIGRFAM: Na/Pi-cotransporter YP_007278628.1 PFAM: Na+/Pi-cotransporter; PhoU domain; TIGRFAM: Na/Pi-cotransporter YP_007278629.1 PFAM: Phosphoribulokinase / Uridine kinase family; manually curated YP_007278630.1 PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit YP_007278631.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_007278632.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase YP_007278633.1 PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP) YP_007278637.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_007278638.1 PFAM: Surface antigen variable number repeat; TIGRFAM: outer membrane protein assembly complex, YaeT protein YP_007278639.1 PFAM: Outer membrane protein (OmpH-like) YP_007278640.1 PFAM: Outer membrane protein (OmpH-like); manually curated YP_007278641.1 PFAM: Outer membrane protein (OmpH-like) YP_007278642.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase YP_007278643.1 PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A YP_007278644.1 PFAM: Predicted permease YP_007278645.1 PFAM: Bacterial alpha-L-rhamnosidase; Alpha-L-rhamnosidase N-terminal domain YP_007278646.1 PFAM: Glycosyl hydrolases family 43 YP_007278647.1 PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase YP_007278648.1 PFAM: Desulfoferrodoxin; TIGRFAM: desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain YP_007278651.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007278652.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007278653.1 PFAM: short chain dehydrogenase YP_007278654.1 PFAM: Bacterial DNA-binding protein YP_007278655.1 PFAM: Rhomboid family YP_007278656.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_007278657.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF YP_007278659.1 PFAM: Melibiase YP_007278660.1 PFAM: Melibiase YP_007278661.1 PFAM: SusD family YP_007278662.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007278663.1 PFAM: Major Facilitator Superfamily YP_007278664.1 PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase YP_007278665.1 PFAM: ROK family YP_007278666.1 PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain YP_007278667.1 PFAM: Bacterial alpha-L-rhamnosidase; Alpha-L-rhamnosidase N-terminal domain YP_007278668.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007278669.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_007278674.1 PFAM: Protein of unknown function (DUF541) YP_007278675.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase YP_007278676.1 PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD YP_007278677.1 PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial YP_007278678.1 PFAM: Uroporphyrinogen-III synthase HemD YP_007278680.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase YP_007278681.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_007278683.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD YP_007278684.1 PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II YP_007278686.1 PFAM: O-methyltransferase YP_007278693.1 PFAM: Protein of unknown function, DUF583 YP_007278694.1 manually curated YP_007278698.1 PFAM: Phage major tail protein 2; TIGRFAM: phage major tail protein, TP901-1 family YP_007278700.1 PFAM: Bacteriophage protein of unknown function (DUF646); TIGRFAM: phage protein, HK97 gp10 family YP_007278701.1 PFAM: Phage head-tail joining protein YP_007278702.1 PFAM: Phage QLRG family, putative DNA packaging; TIGRFAM: uncharacterized phage protein (possible DNA packaging); manually curated YP_007278703.1 PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family YP_007278704.1 PFAM: Caudovirus prohead protease; TIGRFAM: phage prohead protease, HK97 family YP_007278705.1 PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family YP_007278706.1 PFAM: Phage terminase, small subunit; TIGRFAM: phage terminase, small subunit, putative, P27 family YP_007278711.1 PFAM: Phage integrase family YP_007278713.1 PFAM: tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (M); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family YP_007278714.1 PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179) YP_007278715.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family YP_007278716.1 PFAM: Two component regulator propeller YP_007278718.1 PFAM: Glycosyl transferase family 2 YP_007278721.1 PFAM: Nucleotidyltransferase domain YP_007278722.1 PFAM: RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases YP_007278723.1 PFAM: NAD dependent epimerase/dehydratase family YP_007278724.1 PFAM: PAP2 superfamily YP_007278725.1 PFAM: Phage integrase family YP_007278726.1 PFAM: Phage integrase family YP_007278729.1 PFAM: Cupin domain YP_007278733.1 PFAM: Virulence-associated protein E YP_007278735.1 PFAM: Protein of unknown function (DUF3408) YP_007278737.1 PFAM: Relaxase/Mobilisation nuclease domain YP_007278738.1 PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family YP_007278739.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_007278740.1 PFAM: Bacterial lipid A biosynthesis acyltransferase YP_007278741.1 PFAM: Protein of unknown function (DUF3108) YP_007278743.1 PFAM: GH3 auxin-responsive promoter YP_007278747.1 TIGRFAM: conserved hypothetical protein (putative transposase or invertase) YP_007278748.1 PFAM: NPCBM/NEW2 domain YP_007278749.1 PFAM: Double-stranded RNA binding motif; RNase3 domain; TIGRFAM: ribonuclease III, bacterial YP_007278750.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II YP_007278751.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_007278753.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase) YP_007278754.1 PFAM: Glycosyl transferases group 1 YP_007278755.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase) YP_007278756.1 PFAM: Arabidopsis thaliana protein of unknown function (DUF821) YP_007278757.1 PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family YP_007278758.1 PFAM: Aldo/keto reductase family YP_007278759.1 PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_007278760.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein YP_007278762.1 PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor YP_007278764.1 PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat YP_007278766.1 PFAM: Sir2 family YP_007278767.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YP_007278768.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YP_007278769.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YP_007278770.1 PFAM: AsnC family YP_007278771.1 PFAM: Membrane dipeptidase (Peptidase family M19); Peptidase C26 YP_007278772.1 PFAM: Peptidase family M28 YP_007278773.1 PFAM: Virulence-associated protein E; manually curated YP_007278774.1 PFAM: Domain of unknown function (DUF386); TIGRFAM: uncharacterized protein, YhcH/YjgK/YiaL family YP_007278775.1 PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS YP_007278779.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007278780.1 PFAM: Fibronectin type III domain YP_007278782.1 PFAM: SpoU rRNA Methylase family YP_007278783.1 PFAM: Fe-S metabolism associated domain YP_007278784.1 PFAM: Peptidase family U32 YP_007278786.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase YP_007278787.1 PFAM: ADP-ribosylglycohydrolase YP_007278788.1 PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; Citrate lyase, alpha subunit (CitF) YP_007278789.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase YP_007278791.1 PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF YP_007278792.1 PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family YP_007278793.1 PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein YP_007278794.1 PFAM: Acyltransferase family YP_007278795.1 PFAM: CRISPR associated protein Cas2 YP_007278797.1 PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I YP_007278798.1 PFAM: Polyprenyl synthetase YP_007278799.1 PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase YP_007278801.1 PFAM: MazG nucleotide pyrophosphohydrolase domain YP_007278802.1 PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_007278803.1 PFAM: UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit YP_007278804.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase YP_007278805.1 PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A YP_007278806.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family YP_007278807.1 PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup YP_007278808.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_007278812.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus YP_007278814.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_007278816.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family YP_007278817.1 PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain YP_007278820.1 PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein YP_007278821.1 PFAM: FG-GAP repeat YP_007278822.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family; tRNA dihydrouridine synthase A YP_007278823.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA YP_007278824.1 PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family YP_007278825.1 PFAM: Protein of unknown function (DUF2851) YP_007278828.1 PFAM: Carbohydrate binding domain; Alpha-L-arabinofuranosidase C-terminus YP_007278830.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007278831.1 PFAM: SusD family YP_007278832.1 PFAM: Fasciclin domain YP_007278833.1 PFAM: Fasciclin domain YP_007278834.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007278835.1 PFAM: SusD family YP_007278836.1 PFAM: Glycosyl hydrolase catalytic core YP_007278840.1 PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase YP_007278841.1 TIGRFAM: signal peptidase I, bacterial type YP_007278843.1 PFAM: WbqC-like protein family YP_007278844.1 PFAM: Nitroreductase family YP_007278845.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_007278847.1 PFAM: pfkB family carbohydrate kinase YP_007278848.1 PFAM: AhpC/TSA family YP_007278849.1 PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; IMG reference gene:2509595459_SP YP_007278850.1 PFAM: Replication initiation factor; manually curated YP_007278853.1 PFAM: Domain of unknown function (DUF334); manually curated YP_007278854.1 PFAM: Relaxase/Mobilisation nuclease domain YP_007278855.1 PFAM: Bacterial mobilisation protein (MobC); manually curated YP_007296326.1 PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA YP_007296327.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_007296328.1 PFAM: Carbohydrate binding domain; Alpha-L-arabinofuranosidase C-terminus YP_007296329.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial YP_007296330.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YP_007296331.1 PFAM: Phosphoglucose isomerase YP_007296332.1 PFAM: haloacid dehalogenase-like hydrolase YP_007296334.1 PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_007296335.1 PFAM: DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD YP_007296336.1 PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, subtype I-C/DVULG; CRISPR-associated protein Cas5, N-terminal domain YP_007296337.1 PFAM: CRISPR-associated protein (Cas_Csd1); TIGRFAM: CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG YP_007296338.1 PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG YP_007296339.1 PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4 YP_007296340.1 PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2 YP_007296343.1 PFAM: Starch synthase catalytic domain YP_007296344.1 PFAM: Biotin-requiring enzyme YP_007296346.1 PFAM: Carboxyl transferase domain YP_007296347.1 PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region YP_007296349.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain YP_007296350.1 PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase YP_007296351.1 PFAM: Glycoside hydrolase 97 YP_007296352.1 PFAM: Exonuclease; UvrD/REP helicase YP_007296354.1 PFAM: OPT oligopeptide transporter protein; TIGRFAM: putative oligopeptide transporter, OPT family; oligopeptide transporters, OPT superfamily YP_007296355.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB YP_007296356.1 PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) YP_007296357.1 PFAM: Protein of unknown function (DUF1573) YP_007296358.1 PFAM: MG2 domain; Alpha-2-macroglobulin family YP_007296359.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain YP_007296361.1 PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family YP_007296365.1 PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase YP_007296367.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_007296368.1 PFAM: Polyprenyl synthetase YP_007296369.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_007296370.1 PFAM: MotA/TolQ/ExbB proton channel family YP_007296372.1 PFAM: Biopolymer transport protein ExbD/TolR YP_007296373.1 PFAM: Biopolymer transport protein ExbD/TolR YP_007296374.1 PFAM: AsnC family YP_007296375.1 PFAM: Dihydrofolate reductase YP_007296376.1 PFAM: NOL1/NOP2/sun family YP_007296378.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007296380.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase YP_007296381.1 PFAM: Carbon-nitrogen hydrolase YP_007296385.1 PFAM: TonB-dependent Receptor Plug Domain YP_007296387.1 PFAM: Heavy-metal-associated domain YP_007296389.1 PFAM: Glycosyl hydrolase family 53; Glycosyl hydrolases family 35 YP_007296390.1 PFAM: SusD family YP_007296391.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007296392.1 PFAM: Y_Y_Y domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two component regulator propeller YP_007296393.1 PFAM: Protein of unknown function (DUF1212) YP_007296394.1 PFAM: Predicted Permease Membrane Region; TrkA-C domain; TIGRFAM: AspT/YidE/YbjL antiporter duplication domain YP_007296395.1 PFAM: Protein of unknown function (DUF1624) YP_007296396.1 PFAM: Alpha-N-acetylglucosaminidase (NAGLU) YP_007296397.1 PFAM: Glycosyl hydrolases family 28 YP_007296398.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_007296399.1 PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases; manually curated YP_007296400.1 PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase YP_007296401.1 PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase) YP_007296402.1 manually curated YP_007296403.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: o-succinylbenzoate synthase YP_007296404.1 PFAM: AMP-binding enzyme YP_007296405.1 PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase YP_007296407.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_007296408.1 PFAM: S4 domain YP_007296409.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase YP_007296410.1 PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form YP_007296411.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB YP_007296412.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit YP_007296413.1 PFAM: YbbR-like protein YP_007296414.1 PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_007296415.1 PFAM: Hsp20/alpha crystallin family; manually curated YP_007296416.1 PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein YP_007296417.1 PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein YP_007296418.1 PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase YP_007296420.1 PFAM: HMGL-like; Conserved carboxylase domain YP_007296424.1 PFAM: Cys/Met metabolism PLP-dependent enzyme YP_007296425.1 PFAM: Aminotransferase class I and II YP_007296426.1 PFAM: TrkA-C domain; Sodium/hydrogen exchanger family YP_007296427.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T YP_007296428.1 PFAM: Acetyltransferase (GNAT) family YP_007296430.1 TIGRFAM: Por secretion system C-terminal sorting domain YP_007296431.1 PFAM: Domain of unknown function (DUF303) YP_007296433.1 PFAM: Domain of unknown function DUF20 YP_007296434.1 PFAM: Thymidine kinase YP_007296435.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family YP_007296437.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_007296438.1 PFAM: Uncharacterised protein family UPF0102 YP_007296439.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region YP_007296440.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase YP_007296441.1 PFAM: AraC-like ligand binding domain YP_007296442.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007296443.1 PFAM: SusD family YP_007296444.1 PFAM: Alpha-L-fucosidase YP_007296445.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family YP_007296446.1 PFAM: Isochorismatase family YP_007296447.1 PFAM: Protein of unknown function (DUF328) YP_007296449.1 PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase YP_007296450.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain; TIGRFAM: glutamate synthase (NADPH), homotetrameric YP_007296452.1 PFAM: Phosphorylase superfamily YP_007296453.1 PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain YP_007296454.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase YP_007296457.1 PFAM: Domain of unknown function (DUF1814) YP_007296458.1 PFAM: Protein of unknwon function (DUF2893) YP_007296462.1 PFAM: IstB-like ATP binding protein YP_007296464.1 PFAM: Peptidase C10 family; TIGRFAM: Por secretion system C-terminal sorting domain YP_007296467.1 PFAM: DNA/RNA non-specific endonuclease YP_007296468.1 PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I YP_007296469.1 PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_007296470.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase YP_007296471.1 PFAM: AhpC/TSA family; manually curated YP_007296472.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_007296474.1 PFAM: SPFH domain / Band 7 family YP_007296475.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: xanthine phosphoribosyltransferase YP_007296476.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease; xanthine permease YP_007296477.1 PFAM: Protein of unknown function (DUF2492); TIGRFAM: probable metal-binding protein YP_007296478.1 TIGRFAM: autotransporter-associated beta strand repeat YP_007296479.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_007296481.1 TIGRFAM: Por secretion system C-terminal sorting domain YP_007296484.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_007296485.1 PFAM: AhpC/TSA family YP_007296486.1 PFAM: Alginate lyase; Glycosyl Hydrolase Family 88 YP_007296487.1 PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase YP_007296489.1 PFAM: ParA/MinD ATPase like; Anion-transporting ATPase YP_007296490.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_007296491.1 PFAM: WD40-like Beta Propeller Repeat; OmpA family YP_007296492.1 PFAM: Bacterial regulatory proteins, luxR family YP_007296494.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_007296495.1 PFAM: CDP-alcohol phosphatidyltransferase YP_007296497.1 PFAM: Nucleotidyl transferase YP_007296498.1 PFAM: Patatin-like phospholipase YP_007296499.1 PFAM: Protein of unknown function (DUF2807) YP_007296500.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; BadF/BadG/BcrA/BcrD ATPase family; CoA enzyme activase uncharacterised domain (DUF2229); TIGRFAM: CoA-substrate-specific enzyme activase, putative YP_007296501.1 PFAM: Ferritin-like domain YP_007296502.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: alkyl hydroperoxide reductase, F subunit YP_007296503.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin YP_007296504.1 PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain YP_007296505.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_007296506.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase YP_007296507.1 PFAM: Putative RNA methylase family UPF0020; THUMP domain YP_007296508.1 PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region YP_007296509.1 PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase YP_007296513.1 PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase YP_007296514.1 PFAM: Tetratricopeptide repeat YP_007296515.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_007296516.1 PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF YP_007296517.1 PFAM: Sporulation related domain YP_007296519.1 PFAM: Protein of unknown function (DUF1469) YP_007296521.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_007296522.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_007296524.1 PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH YP_007296526.1 PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain YP_007296527.1 PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_007296528.1 manually curated YP_007296529.1 PFAM: ABC transporter YP_007296530.1 PFAM: GrpE YP_007296531.1 PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ YP_007296532.1 PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase YP_007296533.1 PFAM: Aldose 1-epimerase YP_007296534.1 PFAM: Major Facilitator Superfamily; TIGRFAM: glucose/galactose transporter YP_007296535.1 PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase YP_007296536.1 PFAM: Aldose 1-epimerase YP_007296537.1 PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family YP_007296538.1 PFAM: NUDIX domain YP_007296539.1 PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase YP_007296540.1 PFAM: L-arabinose isomerase; L-arabinose isomerase C-terminal domain YP_007296541.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_007296542.1 PFAM: Alpha-L-arabinofuranosidase C-terminus YP_007296543.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, pyrimidine binding domain YP_007296544.1 PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family YP_007296545.1 PFAM: Bacterial DNA-binding protein YP_007296546.1 PFAM: UvrD/REP helicase YP_007296547.1 PFAM: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase YP_007296548.1 PFAM: OmpA family YP_007296549.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); Prolyl-tRNA synthetase, C-terminal; TIGRFAM: prolyl-tRNA synthetase, family I YP_007296550.1 PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase YP_007296553.1 PFAM: SNO glutamine amidotransferase family; TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 YP_007296554.1 PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 YP_007296555.1 PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase YP_007296556.1 PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) YP_007296560.1 PFAM: Glycosyl hydrolase family 67 C-terminus; Glycosyl hydrolase family 67 middle domain YP_007296561.1 PFAM: Glycosyl hydrolases family 43 YP_007296563.1 PFAM: Y_Y_Y domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Two component regulator propeller; His Kinase A (phosphoacceptor) domain YP_007296564.1 PFAM: Glycosyl hydrolases family 43 YP_007296565.1 PFAM: Glycosyl hydrolase family 10 YP_007296566.1 PFAM: Major Facilitator Superfamily; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter YP_007296567.1 PFAM: Domain of unknown function (DUF303); Glycosyl hydrolases family 2, sugar binding domain YP_007296568.1 PFAM: O-Glycosyl hydrolase family 30 YP_007296569.1 PFAM: SusD family YP_007296570.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007296571.1 PFAM: Fasciclin domain YP_007296572.1 PFAM: Fasciclin domain YP_007296573.1 PFAM: SusD family YP_007296574.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007296575.1 PFAM: Glycosyl hydrolases family 43 YP_007296576.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_007296577.1 PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase YP_007296578.1 PFAM: TrkA-C domain; Sodium/hydrogen exchanger family YP_007296579.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007296580.1 PFAM: Phosphotransferase enzyme family YP_007296582.1 PFAM: Protein of unknown function (DUF1232) YP_007296584.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family YP_007296590.1 PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region YP_007296591.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_007296592.1 PFAM: Glycosyl transferase family 2 YP_007296595.1 PFAM: Surface antigen YP_007296596.1 PFAM: SpoU rRNA Methylase family YP_007296598.1 PFAM: Imidazoleglycerol-phosphate dehydratase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain; histidinol-phosphatase YP_007296599.1 PFAM: Relaxase/Mobilisation nuclease domain YP_007296601.1 PFAM: Protein of unknown function (DUF3408) YP_007296602.1 PFAM: CHC2 zinc finger YP_007296603.1 manually curated YP_007296604.1 PFAM: Histidine kinase YP_007296605.1 PFAM: Integrase core domain; manually curated; non-canonical start codon YP_007296609.1 PFAM: Fibronectin type III domain; manually curated YP_007296614.1 PFAM: SusD family YP_007296615.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007296616.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_007296620.1 PFAM: Bacterial regulatory proteins, luxR family YP_007296621.1 PFAM: Phage integrase family YP_007296622.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_007296625.1 PFAM: Glycosyl hydrolases family 2, sugar binding domain; manually curated YP_007296626.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain YP_007296627.1 PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase family YP_007296628.1 PFAM: Bacterial alpha-L-rhamnosidase; Alpha-L-rhamnosidase N-terminal domain YP_007296629.1 PFAM: alpha/beta hydrolase fold YP_007296630.1 PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt) YP_007296631.1 PFAM: Carboxylesterase YP_007296632.1 PFAM: Carboxylesterase YP_007296633.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; PA14 domain YP_007296636.1 PFAM: Bacterial regulatory proteins, tetR family YP_007296637.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_007296638.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_007296640.1 PFAM: MMPL family YP_007296641.1 PFAM: Protein of unknown function (DUF1329) YP_007296644.1 PFAM: Phage integrase family YP_007296645.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_007296646.1 PFAM: Histidine kinase YP_007296648.1 PFAM: ABC transporter YP_007296649.1 PFAM: Outer membrane efflux protein YP_007296650.1 PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit YP_007296652.1 PFAM: Uncharacterised protein family (UPF0014) YP_007296655.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit YP_007296656.1 PFAM: AbgT putative transporter family YP_007296657.1 PFAM: Response regulator receiver domain YP_007296658.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007296659.1 PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase; manually curated YP_007296660.1 PFAM: pfkB family carbohydrate kinase YP_007296661.1 PFAM: Bacterial regulatory proteins, lacI family YP_007296662.1 PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus YP_007296663.1 PFAM: Na+/H+ antiporter family YP_007296665.1 PFAM: Glycosyl hydrolases family 25 YP_007296667.1 PFAM: Glycosyl hydrolases family 25 YP_007296668.1 PFAM: Phosphofructokinase; TIGRFAM: diphosphate--fructose-6-phosphate 1-phosphotransferase YP_007296671.1 PFAM: Acyltransferase YP_007296672.1 PFAM: Fibronectin type III domain YP_007296674.1 PFAM: Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ YP_007296676.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I YP_007296677.1 PFAM: EamA-like transporter family YP_007296678.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_007296679.1 PFAM: AraC-like ligand binding domain YP_007296680.1 PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family YP_007296681.1 PFAM: Tetratricopeptide repeat YP_007296684.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_007296686.1 PFAM: Glycosyl transferase family 2 YP_007296687.1 PFAM: Polysaccharide biosynthesis protein YP_007296688.1 PFAM: Glycosyl transferase family 2 YP_007296689.1 PFAM: Glycosyl transferase family 2 YP_007296695.1 PFAM: POT family YP_007296697.1 PFAM: LysM domain YP_007296698.1 TIGRFAM: gliding motility-associated C-terminal domain YP_007296699.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_007296700.1 PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN) YP_007296702.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N YP_007296703.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M YP_007296704.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L YP_007296705.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_007296706.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_007296708.1 PFAM: NADH dehydrogenase YP_007296709.1 PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit YP_007296710.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit YP_007296711.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_007296712.1 PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase YP_007296713.1 PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein YP_007296714.1 PFAM: Phospholipase D Active site motif YP_007296716.1 PFAM: Glycosyl hydrolases family 43 YP_007296717.1 PFAM: Fatty acid elongase 3-ketoacyl-CoA synthase 1 YP_007296718.1 PFAM: Putative esterase YP_007296719.1 PFAM: ADP-ribosylglycohydrolase YP_007296720.1 PFAM: ADP-ribosylglycohydrolase YP_007296721.1 PFAM: ADP-ribosylglycohydrolase YP_007296722.1 PFAM: SusD family YP_007296723.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007296724.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase YP_007296725.1 PFAM: Bacterial regulatory proteins, lacI family; family; manually curated YP_007296726.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoyltransferase and lipoate-protein ligase YP_007296727.1 PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: glycine cleavage system T protein YP_007296728.1 PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein YP_007296729.1 PFAM: Glycine cleavage system P-protein YP_007296730.1 PFAM: Aminotransferase class-V YP_007296731.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase YP_007296732.1 PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; LysM domain YP_007296733.1 PFAM: IgA Peptidase M64 YP_007296735.1 PFAM: 4Fe-4S binding domain YP_007296736.1 PFAM: Immune inhibitor A peptidase M6; TIGRFAM: M6 family metalloprotease domain YP_007296737.1 PFAM: Cupin domain YP_007296742.1 PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21 YP_007296743.1 PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27 YP_007296744.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD-superfamily hydrolase, subfamily IIIA; 2-phosphoglycolate phosphatase, prokaryotic YP_007296745.1 PFAM: Starch binding domain YP_007296746.1 PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family YP_007296747.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase YP_007296749.1 PFAM: SNARE associated Golgi protein YP_007296751.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain YP_007296755.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_007296756.1 PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit YP_007296757.1 PFAM: ABC transporter YP_007296758.1 PFAM: Putative esterase YP_007296759.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter YP_007296762.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_007296763.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_007296764.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_007296765.1 PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family YP_007296766.1 PFAM: TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain YP_007296768.1 PFAM: FecR protein YP_007296770.1 TIGRFAM: Listeria/Bacterioides repeat YP_007296774.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_007296775.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase YP_007296776.1 PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine/guanosine/xanthosine phosphorylase family; manually curated YP_007296777.1 PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase YP_007296778.1 PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 67K type YP_007296779.1 PFAM: Glycosyl hydrolases family 28 YP_007296781.1 PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain YP_007296783.1 PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG YP_007296788.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007296792.1 PFAM: DpnII restriction endonuclease YP_007296793.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam) YP_007296796.1 PFAM: ABC transporter YP_007296797.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB YP_007296798.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase YP_007296800.1 PFAM: Signal peptidase (SPase) II YP_007296802.1 PFAM: Peptidase family C69 YP_007296803.1 TIGRFAM: phosphoesterase, MJ0936 family YP_007296804.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007296807.1 PFAM: Melibiase YP_007296808.1 PFAM: Polysaccharide biosynthesis protein YP_007296810.1 PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family YP_007296813.1 PFAM: Cupin domain YP_007296814.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease YP_007296815.1 PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme YP_007296816.1 PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1 YP_007296817.1 PFAM: Sodium:solute symporter family YP_007296818.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007296819.1 PFAM: FecR protein YP_007296820.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007296821.1 PFAM: SusD family YP_007296822.1 PFAM: AhpC/TSA family YP_007296823.1 PFAM: Phage derived protein Gp49-like (DUF891); manually curated; non-canonical start codon YP_007296825.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form YP_007296826.1 PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family YP_007296828.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase YP_007296829.1 PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase) YP_007296830.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_007296831.1 PFAM: CBS domain; Voltage gated chloride channel YP_007296834.1 PFAM: Peptidase M15 YP_007296836.1 PFAM: SusD family YP_007296837.1 PFAM: TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007296838.1 PFAM: Fasciclin domain YP_007296839.1 PFAM: Fasciclin domain YP_007296840.1 PFAM: SusD family YP_007296841.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007296843.1 PFAM: Protein of unknown function (DUF1703); Predicted AAA-ATPase YP_007296844.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase YP_007296845.1 PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region YP_007296846.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit YP_007296847.1 PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit YP_007296848.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase YP_007296849.1 PFAM: Indole-3-glycerol phosphate synthase YP_007296850.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase YP_007296852.1 TIGRFAM: addiction module toxin component, YafQ family; addiction module toxin, RelE/StbE family YP_007296853.1 PFAM: Glycosyl Hydrolase Family 88; Glycosyl hydrolases family 28 YP_007296855.1 PFAM: Glycosyl transferase family 2 YP_007296858.1 PFAM: ApbE family YP_007296859.1 PFAM: Cyclic nucleotide-binding domain YP_007296860.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_007296863.1 PFAM: RmuC family YP_007296864.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_007296867.1 PFAM: Glycosyl hydrolases family 25; MORN repeat YP_007296869.1 PFAM: Collagenase; Peptidase family U32 YP_007296870.1 PFAM: Homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase YP_007296871.1 PFAM: Peptidase family M13 YP_007296872.1 PFAM: ABC transporter YP_007296873.1 PFAM: Surface antigen YP_007296874.1 PFAM: Family of unknown function (DUF490) YP_007296875.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_007296876.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase YP_007296877.1 PFAM: Bacterial regulatory proteins, tetR family YP_007296878.1 manually curated YP_007296879.1 PFAM: Protein of unknown function (DUF419) YP_007296881.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007296883.1 PFAM: AraC-like ligand binding domain YP_007296884.1 PFAM: Alpha-L-fucosidase YP_007296885.1 PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein YP_007296886.1 PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase YP_007296887.1 PFAM: Phosphate-selective porin O and P YP_007296889.1 PFAM: short chain dehydrogenase YP_007296890.1 PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YP_007296891.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_007296892.1 PFAM: Polysaccharide pyruvyl transferase YP_007296893.1 PFAM: Glycosyl transferases group 1 YP_007296895.1 PFAM: Acyltransferase family YP_007296896.1 PFAM: Glycosyl transferase family 2 YP_007296897.1 PFAM: Capsular polysaccharide synthesis protein YP_007296898.1 PFAM: Cytidylyltransferase; Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: glycerol-3-phosphate cytidylyltransferase; cytidyltransferase-related domain YP_007296899.1 PFAM: short chain dehydrogenase YP_007296900.1 PFAM: LICD Protein Family YP_007296901.1 PFAM: Domain of unknown function (DUF1972); Glycosyl transferases group 1 YP_007296903.1 PFAM: NAD dependent epimerase/dehydratase family YP_007296904.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase YP_007296905.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase YP_007296908.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: DNA-binding protein, histone-like, putative YP_007296909.1 PFAM: Endoribonuclease L-PSP YP_007296910.1 PFAM: Endoribonuclease L-PSP YP_007296911.1 PFAM: ResB-like family; Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB YP_007296913.1 PFAM: Phosphate-selective porin O and P YP_007296914.1 PFAM: Protein of unknown function (DUF1111) YP_007296915.1 PFAM: Imelysin YP_007296917.1 PFAM: Hemerythrin HHE cation binding domain; Bacterial regulatory proteins, luxR family YP_007296918.1 PFAM: Bacterial regulatory proteins, luxR family YP_007296919.1 PFAM: Transcription termination factor nusG YP_007296920.1 PFAM: Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3 YP_007296921.1 PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase YP_007296923.1 PFAM: LysE type translocator YP_007296924.1 PFAM: Rhodanese-like domain YP_007296925.1 PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3 YP_007296926.1 PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35 YP_007296927.1 PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20 YP_007296928.1 PFAM: Chitobiase/beta-hexosaminidase C-terminal domain YP_007296930.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_007296931.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007296933.1 PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein YP_007296934.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_007296935.1 PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase YP_007296936.1 PFAM: Diacylglycerol kinase catalytic domain YP_007296938.1 PFAM: Amylo-alpha-1,6-glucosidase; Glycogen debranching enzyme N terminal; TIGRFAM: glycogen debranching enzyme, archaeal type, putative YP_007296939.1 PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1 YP_007296940.1 PFAM: Glycosyl hydrolase family 57 YP_007296943.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_007296944.1 PFAM: GDSL-like Lipase/Acylhydrolase; alpha/beta hydrolase fold YP_007296945.1 TIGRFAM: autotransporter-associated beta strand repeat YP_007296946.1 PFAM: Chaperonin 10 Kd subunit YP_007296947.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_007296949.1 PFAM: P-loop ATPase protein family; Phosphotransferase enzyme family YP_007296950.1 PFAM: Cellulase (glycosyl hydrolase family 5) YP_007296951.1 PFAM: Glycosyltransferase family 36; Putative carbohydrate binding domain; Glycosyltransferase 36 associated family YP_007296952.1 PFAM: Major Facilitator Superfamily; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter YP_007296953.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007296956.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain YP_007296957.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain YP_007296958.1 PFAM: Y_Y_Y domain; Two component regulator propeller YP_007296959.1 PFAM: Flavodoxin-like fold YP_007296960.1 PFAM: Maltose acetyltransferase; Bacterial transferase hexapeptide (three repeats) YP_007296962.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007296964.1 PFAM: Y_Y_Y domain YP_007296965.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007296966.1 PFAM: SusD family YP_007296967.1 PFAM: Glycosyl hydrolases family 31 YP_007296968.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_007296969.1 PFAM: Glycosyl transferases group 1 YP_007296970.1 PFAM: Aldo/keto reductase family YP_007296972.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_007296973.1 PFAM: AMP-binding enzyme YP_007296974.1 PFAM: Phosphopantetheine attachment site YP_007296975.1 PFAM: short chain dehydrogenase YP_007296976.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_007296978.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family YP_007296979.1 PFAM: Bacterial sugar transferase YP_007296980.1 PFAM: Glycosyl transferases group 1 YP_007296981.1 PFAM: Glycosyl transferase family 2; manually curated YP_007296984.1 PFAM: Glycosyl transferase family 2 YP_007296985.1 PFAM: Acyltransferase family YP_007296986.1 PFAM: Glycosyl transferase family 2 YP_007296987.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_007296988.1 PFAM: Glycosyl transferases group 1 YP_007296989.1 PFAM: Glycosyl transferase family 2 YP_007296990.1 PFAM: Glycosyl transferase family 2 YP_007296991.1 PFAM: Glycosyl transferases group 1 YP_007296993.1 PFAM: Acyltransferase family YP_007296994.1 PFAM: Acyltransferase family YP_007296995.1 PFAM: Glycosyl transferase family 2; Domain of unknown function (DUF1919) YP_007296996.1 PFAM: UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase YP_007296997.1 PFAM: Protein of unknown function (DUF1703); Predicted AAA-ATPase YP_007296998.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_007296999.1 TIGRFAM: Por secretion system C-terminal sorting domain YP_007297000.1 PFAM: Transcription termination factor nusG YP_007297002.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007297003.1 PFAM: SusD family YP_007297006.1 PFAM: Immune inhibitor A peptidase M6; TIGRFAM: M6 family metalloprotease domain YP_007297008.1 PFAM: Bacterial Cytochrome Ubiquinol Oxidase YP_007297009.1 PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB) YP_007297010.1 PFAM: Protein of unknown function (DUF1237) YP_007297011.1 PFAM: Patatin-like phospholipase YP_007297012.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_007297015.1 PFAM: ABC transporter YP_007297017.1 PFAM: Outer membrane efflux protein YP_007297019.1 PFAM: EamA-like transporter family YP_007297020.1 manually curated YP_007297021.1 PFAM: Glycosyl hydrolase family 98; Glycosyl hydrolase family 98 C-terminal domain YP_007297023.1 PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, mitochondrial YP_007297024.1 PFAM: Citrate synthase YP_007297025.1 PFAM: ThiF family YP_007297027.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase YP_007297028.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_007297029.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007297030.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007297032.1 PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6 YP_007297033.1 PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18 YP_007297034.1 PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9 YP_007297035.1 PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase YP_007297036.1 PFAM: Threonyl and Alanyl tRNA synthetase second additional domain; Alpha amylase, catalytic domain YP_007297037.1 PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family YP_007297039.1 PFAM: Bacterial DNA-binding protein YP_007297040.1 PFAM: Outer membrane protein (OmpH-like) YP_007297042.1 PFAM: Peptidase family M20/M25/M40; TIGRFAM: Xaa-His dipeptidase YP_007297044.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein YP_007297045.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III YP_007297046.1 PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: TIGR02453 family protein; manually curated YP_007297047.1 PFAM: Clostripain family YP_007297048.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase YP_007297049.1 PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein YP_007297051.1 TIGRFAM: ribonuclease Z YP_007297052.1 TIGRFAM: Por secretion system C-terminal sorting domain YP_007297053.1 PFAM: L,D-transpeptidase catalytic domain YP_007297054.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007297060.1 PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit YP_007297061.1 TIGRFAM: outer membrane assembly lipoprotein YfiO YP_007297062.1 PFAM: RNA polymerase Rpb6 YP_007297064.1 PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain YP_007297065.1 PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase YP_007297067.1 PFAM: SusD family YP_007297068.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007297069.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase YP_007297070.1 PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Metalloenzyme superfamily; TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form; proposed homoserine kinase YP_007297071.1 PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; Amino acid kinase family; TIGRFAM: aspartate kinase YP_007297072.1 PFAM: FAD binding domain YP_007297073.1 PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase YP_007297075.1 PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent YP_007297076.1 PFAM: NUDIX domain; TIGRFAM: mutator mutT protein YP_007297078.1 PFAM: Fumble; TIGRFAM: pantothenate kinase, eukaryotic/staphyloccocal type YP_007297079.1 PFAM: Peptidase family M49 YP_007297080.1 PFAM: DNA alkylation repair enzyme YP_007297081.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_007297082.1 PFAM: Protein of unknown function DUF58 YP_007297084.1 PFAM: von Willebrand factor type A domain; Aerotolerance regulator N-terminal YP_007297085.1 PFAM: von Willebrand factor type A domain; Aerotolerance regulator N-terminal YP_007297086.1 PFAM: Tetratricopeptide repeat YP_007297088.1 PFAM: Tetratricopeptide repeat; Bacterial SH3 domain YP_007297089.1 PFAM: PAP2 superfamily YP_007297090.1 PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_007297091.1 PFAM: Domain of unknown function (DUF2027); Smr domain YP_007297092.1 PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase YP_007297093.1 PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28 YP_007297094.1 PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type YP_007297096.1 PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I YP_007297097.1 PFAM: Glucuronate isomerase YP_007297098.1 PFAM: Polysaccharide biosynthesis/export protein YP_007297099.1 PFAM: Glutamine amidotransferases class-II YP_007297100.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit YP_007297101.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit YP_007297103.1 PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_007297105.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein YP_007297106.1 PFAM: Protein of unknown function (DUF721) YP_007297107.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase YP_007297108.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_007297109.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_007297110.1 PFAM: Peptidase family M3 YP_007297111.1 PFAM: Nucleotidyl transferase YP_007297112.1 PFAM: GMP synthase C terminal domain; Glutamine amidotransferase class-I; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit YP_007297114.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007297115.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase YP_007297116.1 PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_007297118.1 PFAM: BlaR1 peptidase M56 YP_007297119.1 PFAM: Penicillinase repressor YP_007297120.1 PFAM: Glycosyl hydrolases family 43 YP_007297121.1 PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family YP_007297129.1 TIGRFAM: DNA binding domain, excisionase family YP_007297132.1 PFAM: Phage integrase family YP_007297133.1 PFAM: Phage integrase family YP_007297134.1 manually curated YP_007297136.1 PFAM: 37-kD nucleoid-associated bacterial protein YP_007297139.1 PFAM: DNA alkylation repair enzyme YP_007297140.1 PFAM: DJ-1/PfpI family YP_007297141.1 PFAM: Polyketide cyclase / dehydrase and lipid transport YP_007297143.1 PFAM: AraC-like ligand binding domain YP_007297144.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_007297145.1 PFAM: RteC protein YP_007297147.1 PFAM: Protein of unknown function (DUF3408) YP_007297148.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_007297149.1 PFAM: NUDIX domain YP_007297150.1 PFAM: Integrase core domain; manually curated YP_007297155.1 PFAM: ThiF family YP_007297158.1 PFAM: Protein of unknown function (DUF3408) YP_007297160.1 PFAM: RteC protein YP_007297162.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_007297163.1 PFAM: Histidine kinase YP_007297164.1 PFAM: Histidine kinase YP_007297165.1 PFAM: Beta-lactamase YP_007297168.1 PFAM: Phage integrase family YP_007297169.1 PFAM: Phage integrase family YP_007297171.1 manually curated; non-canonical start codon YP_007297172.1 PFAM: Relaxase/Mobilisation nuclease domain YP_007297173.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007297178.1 manually curated YP_007297179.1 TIGRFAM: Bacteroides conjugation system ATPase, TraG family YP_007297181.1 manually curated YP_007297184.1 TIGRFAM: Bacteroides conjugative transposon TraK protein YP_007297186.1 PFAM: Protein of unknown function (DUF3714); TIGRFAM: Bacteroides conjugative transposon TraM protein YP_007297187.1 TIGRFAM: Bacteroides conjugative transposon TraN protein YP_007297189.1 PFAM: TraX protein YP_007297190.1 PFAM: UvrD/REP helicase YP_007297194.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain YP_007297195.1 PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase YP_007297196.1 PFAM: Helix-turn-helix YP_007297197.1 PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Peptidase family M23 YP_007297199.1 PFAM: Phosphoribosyl transferase domain; MutS domain I YP_007297201.1 PFAM: Domain of unknown function (DUF1738) YP_007297210.1 PFAM: Helix-turn-helix YP_007297212.1 PFAM: DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core YP_007297213.1 manually curated YP_007297217.1 PFAM: Domain of unknown function (DUF1814) YP_007297218.1 PFAM: Bacterial regulatory proteins, luxR family YP_007297219.1 PFAM: Pentaxin family; TIGRFAM: Por secretion system C-terminal sorting domain YP_007297231.1 PFAM: Phage integrase family YP_007297234.1 PFAM: Bacteriophage CI repressor helix-turn-helix domain YP_007297237.1 PFAM: Viral (Superfamily 1) RNA helicase YP_007297238.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_007297241.1 PFAM: Protein of unknown function (DUF3164) YP_007297244.1 PFAM: Phage virion morphogenesis family YP_007297246.1 PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family YP_007297247.1 PFAM: Protein of unknown function (DUF935) YP_007297248.1 PFAM: Protein of unknown function (DUF1320) YP_007297250.1 PFAM: Terminase-like family YP_007297251.1 PFAM: Putative ATPase subunit of terminase (gpP-like) YP_007297254.1 PFAM: N-acetylmuramoyl-L-alanine amidase YP_007297257.1 PFAM: Protein of unknown function (DUF2586) YP_007297260.1 PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region YP_007297262.1 PFAM: Phage late control gene D protein (GPD) YP_007297268.1 PFAM: Phage Tail Collar Domain YP_007297276.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007297280.1 manually curated YP_007297286.1 PFAM: Antirestriction protein (ArdA) YP_007297291.1 PFAM: Phage lysozyme YP_007297293.1 PFAM: Methyltransferase domain YP_007297295.1 PFAM: N-6 DNA Methylase YP_007297298.1 manually curated YP_007297300.1 manually curated YP_007297303.1 PFAM: Domain of unknown function (DUF1896) YP_007297304.1 PFAM: Phage integrase family YP_007297305.1 PFAM: Phage integrase family YP_007297308.1 PFAM: Beta-lactamase YP_007297309.1 PFAM: Histidine kinase YP_007297313.1 PFAM: Phage Tail Collar Domain YP_007297319.1 PFAM: Phage late control gene D protein (GPD) YP_007297321.1 PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region YP_007297324.1 PFAM: Protein of unknown function (DUF2586) YP_007297327.1 PFAM: N-acetylmuramoyl-L-alanine amidase YP_007297330.1 PFAM: Putative ATPase subunit of terminase (gpP-like) YP_007297331.1 PFAM: Terminase-like family YP_007297333.1 PFAM: Protein of unknown function (DUF1320) YP_007297334.1 PFAM: Protein of unknown function (DUF935) YP_007297335.1 PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family YP_007297337.1 PFAM: Phage virion morphogenesis family YP_007297340.1 PFAM: Protein of unknown function (DUF3164) YP_007297343.1 PFAM: Viral (Superfamily 1) RNA helicase YP_007297346.1 PFAM: Bacteriophage CI repressor helix-turn-helix domain YP_007297349.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_007297351.1 PFAM: RteC protein YP_007297353.1 PFAM: Protein of unknown function (DUF3408) YP_007297355.1 PFAM: Phage integrase family YP_007297356.1 PFAM: Protein of unknown function (DUF1016); manually curated YP_007297358.1 PFAM: Relaxase/Mobilisation nuclease domain YP_007297359.1 PFAM: Bacterial mobilisation protein (MobC) YP_007297360.1 PFAM: CHC2 zinc finger YP_007297363.1 PFAM: Helix-turn-helix YP_007297364.1 PFAM: MutS domain V; Smr domain YP_007297366.1 PFAM: Sulfatase YP_007297367.1 PFAM: PAP2 superfamily YP_007297368.1 PFAM: Uncharacterised protein family UPF0066; TIGRFAM: putative methyltransferase, YaeB/AF_0241 family YP_007297369.1 PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC YP_007297370.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_007297371.1 PFAM: Glycosyl hydrolases family 28 YP_007297373.1 PFAM: Citrate transporter YP_007297374.1 PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase YP_007297375.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: ATP synthase, F1 beta subunit YP_007297376.1 PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria) YP_007297379.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_007297380.1 PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c YP_007297381.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b YP_007297382.1 PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit YP_007297383.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit YP_007297384.1 PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit YP_007297387.1 PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter YP_007297388.1 PFAM: Protein of unknown function (DUF1573) YP_007297389.1 PFAM: Glycosyl Hydrolase Family 88 YP_007297390.1 PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type YP_007297391.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_007297392.1 PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I YP_007297393.1 PFAM: Sporulation related domain YP_007297394.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase YP_007297396.1 PFAM: Domain of Unknown Function (DUF1599) YP_007297398.1 PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG YP_007297399.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_007297400.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_007297401.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_007297402.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YP_007297404.1 PFAM: Acetyltransferase (GNAT) family; Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I YP_007297406.1 PFAM: Radical SAM superfamily YP_007297407.1 PFAM: Predicted permease YP_007297408.1 PFAM: Protein of unknown function (DUF3098); manually curated YP_007297409.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP YP_007297410.1 PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase YP_007297411.1 PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_007297412.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_007297413.1 PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle YP_007297414.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain YP_007297415.1 PFAM: Y_Y_Y domain; Two component regulator propeller; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007297421.1 PFAM: SusD family YP_007297422.1 PFAM: Fasciclin domain YP_007297424.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family YP_007297425.1 PFAM: SusD family YP_007297427.1 PFAM: Putative glycosyl hydrolase of unknown function (DUF1680) YP_007297428.1 PFAM: F5/8 type C domain; Putative glycosyl hydrolase of unknown function (DUF1680) YP_007297429.1 PFAM: GSCFA family YP_007297430.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; L-fucokinase YP_007297431.1 PFAM: Major Facilitator Superfamily; TIGRFAM: L-fucose:H+ symporter permease YP_007297432.1 PFAM: Laminin G domain; Fibronectin type III domain YP_007297433.1 PFAM: Bacterial membrane protein YfhO YP_007297434.1 PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_007297435.1 PFAM: S-Ribosylhomocysteinase (LuxS) YP_007297436.1 PFAM: Alanine racemase, C-terminal domain; Mur ligase family, catalytic domain; Alanine racemase, N-terminal domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; alanine racemase YP_007297437.1 PFAM: PTS system sugar-specific permease component YP_007297438.1 PFAM: KduI/IolB family YP_007297439.1 PFAM: Major Facilitator Superfamily YP_007297440.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_007297442.1 PFAM: Nitroreductase family YP_007297443.1 PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent YP_007297444.1 PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain YP_007297445.1 PFAM: N-acetylmuramoyl-L-alanine amidase YP_007297446.1 PFAM: mce related protein; IMG reference gene:2509596965_SP YP_007297447.1 PFAM: Domain of unknown function (DUF334); manually curated YP_007297448.1 PFAM: Relaxase/Mobilisation nuclease domain YP_007297449.1 PFAM: Bacterial mobilisation protein (MobC); manually curated YP_007297451.1 PFAM: Replication initiation factor; manually curated