-- dump date   	20140619_233226
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_002729729.1	identified by Glimmer3; putative
YP_002729730.1	identified by Glimmer3; putative
YP_002729731.1	identified by Glimmer3; putative
YP_002729732.1	identified by match to protein family HMM PF03692
YP_002729733.1	identified by Glimmer3; putative
YP_002729734.1	identified by Glimmer3; putative
YP_002729735.1	identified by Glimmer3; putative
YP_002729736.1	identified by Glimmer3; putative
YP_002729737.1	identified by Glimmer3; putative
YP_002729738.1	identified by Glimmer3; putative
YP_002729740.1	identified by match to protein family HMM PF00589; match to protein family HMM PF02899; similar to protein aq_aa09
YP_002729741.1	identified by Glimmer3; putative
YP_002729742.1	identified by Glimmer3; putative
YP_002729743.1	identified by Glimmer3; putative
YP_002729745.1	identified by Glimmer3; putative
YP_002729747.1	identified by Glimmer3; putative
YP_002729749.1	identified by Glimmer3; putative
YP_002729750.1	identified by Glimmer3; putative
YP_002729752.1	identified by Glimmer3; putative
YP_002729755.1	identified by Glimmer3; putative
YP_002729756.1	identified by Glimmer3; putative
YP_002729757.1	identified by Glimmer3; putative
YP_002729758.1	identified by Glimmer3; putative
YP_002729760.1	identified by Glimmer3; putative
YP_002729761.1	identified by Glimmer3; putative
YP_002729762.1	identified by Glimmer3; putative
YP_002729763.1	identified by Glimmer3; putative
YP_002729764.1	identified by Glimmer3; putative
YP_002729765.1	identified by match to protein family HMM TIGR02746
YP_002729766.1	identified by match to protein family HMM PF09676; match to protein family HMM TIGR02747
YP_002729768.1	identified by Glimmer3; putative
YP_002729770.1	identified by match to protein family HMM PF06447
YP_002729771.1	identified by match to protein family HMM PF06347; match to protein family HMM PF08239
YP_002729772.1	identified by Glimmer3; putative
YP_002729773.1	identified by match to protein family HMM TIGR02761
YP_002729774.1	identified by match to protein family HMM TIGR02762
YP_002729775.1	identified by Glimmer3; putative
YP_002729776.1	identified by Glimmer3; putative
YP_002729778.1	identified by Glimmer3; putative
YP_002729779.1	identified by Glimmer3; putative
YP_002729780.1	identified by match to protein family HMM PF08401
YP_002729781.1	identified by Glimmer3; putative
YP_002729782.1	identified by Glimmer3; putative
YP_002729783.1	identified by Glimmer3; putative
YP_002729785.1	identified by Glimmer3; putative
YP_002729786.1	identified by Glimmer3; putative
YP_002729787.1	identified by match to protein family HMM PF01131; match to protein family HMM PF01751
YP_002729788.1	identified by match to protein family HMM PF01051
YP_002729789.1	identified by Glimmer3; putative
YP_002729791.1	identified by Glimmer3; putative
YP_002729792.1	identified by Glimmer3; putative
YP_002729793.1	identified by Glimmer3; putative
YP_002729794.1	identified by Glimmer3; putative
YP_002729797.1	identified by Glimmer3; putative
YP_002729798.1	identified by Glimmer3; putative
YP_002729799.1	identified by match to protein family HMM PF00166
YP_002729800.1	identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF08335
YP_002729801.1	identified by match to protein family HMM PF01119; match to protein family HMM PF02518; match to protein family HMM PF08676; match to protein family HMM TIGR00585
YP_002729803.1	identified by match to protein family HMM PF01977; match to protein family HMM TIGR00148; match to protein family HMM TIGR03701
YP_002729804.1	identified by Glimmer3
YP_002729805.1	identified by match to protein family HMM PF02706
YP_002729806.1	identified by match to protein family HMM PF05362
YP_002729808.1	identified by match to protein family HMM PF00551; match to protein family HMM TIGR00639
YP_002729809.1	identified by match to protein family HMM PF04784
YP_002729810.1	identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878
YP_002729811.1	THEP1; Aquifex aeolicus protein exhibits ATPase and GTPase activity; crystal structure shows RecA-like fold
YP_002729812.1	identified by match to protein family HMM PF00795
YP_002729813.1	identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149
YP_002729814.1	identified by match to protein family HMM PF00156
YP_002729815.1	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine
YP_002729816.1	identified by match to protein family HMM PF00982
YP_002729817.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_002729818.1	identified by Glimmer3
YP_002729819.1	identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM PF03023; match to protein family HMM TIGR01695
YP_002729820.1	identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002729821.1	identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064
YP_002729822.1	identified by match to protein family HMM PF01475
YP_002729823.1	identified by match to protein family HMM PF00174
YP_002729824.1	identified by match to protein family HMM PF01546; match to protein family HMM PF07687
YP_002729825.1	identified by match to protein family HMM PF00583
YP_002729827.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_002729828.1	identified by Glimmer3
YP_002729829.1	identified by match to protein family HMM PF00106
YP_002729831.1	identified by match to protein family HMM PF01992
YP_002729832.1	identified by match to protein family HMM PF01496
YP_002729833.1	identified by match to protein family HMM PF00137
YP_002729834.1	identified by match to protein family HMM PF01990
YP_002729835.1	identified by Glimmer3
YP_002729836.1	identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874
YP_002729837.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex
YP_002729838.1	identified by match to protein family HMM PF01813; match to protein family HMM TIGR00309
YP_002729839.1	identified by match to protein family HMM PF00575
YP_002729840.1	identified by match to protein family HMM PF01699
YP_002729841.1	identified by match to protein family HMM PF03255; match to protein family HMM TIGR00513
YP_002729842.1	identified by match to protein family HMM PF01075
YP_002729843.1	identified by match to protein family HMM PF00571
YP_002729844.1	identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891
YP_002729847.1	identified by match to protein family HMM PF00394; match to protein family HMM PF07731; match to protein family HMM PF07732; match to protein family HMM TIGR01409; match to protein family HMM TIGR01480
YP_002729848.1	identified by match to protein family HMM PF05275
YP_002729849.1	identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061
YP_002729850.1	involved in the peptidyltransferase reaction during translation
YP_002729851.1	identified by match to protein family HMM PF01098; match to protein family HMM TIGR02210
YP_002729852.1	identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423
YP_002729853.1	identified by Glimmer3
YP_002729854.1	identified by match to protein family HMM PF04085; match to protein family HMM TIGR00219
YP_002729855.1	functions in MreBCD complex in some organisms
YP_002729856.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_002729857.1	identified by match to protein family HMM PF01408
YP_002729858.1	identified by match to protein family HMM PF01041
YP_002729859.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; betsubunit A of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_002729860.1	Regulates rRNA biosynthesis by transcriptional antitermination
YP_002729861.1	identified by match to protein family HMM PF00149
YP_002729862.1	identified by Glimmer3
YP_002729863.1	identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739
YP_002729864.1	identified by match to protein family HMM PF05036
YP_002729866.1	identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676
YP_002729867.1	protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP
YP_002729868.1	identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727
YP_002729869.1	identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472
YP_002729870.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_002729871.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_002729872.1	identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001
YP_002729875.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
YP_002729876.1	identified by match to protein family HMM PF02075; match to protein family HMM TIGR00228
YP_002729877.1	identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033
YP_002729878.1	identified by match to protein family HMM PF00633; match to protein family HMM PF00730
YP_002729879.1	identified by match to protein family HMM PF01553; match to protein family HMM TIGR00530
YP_002729880.1	identified by match to protein family HMM PF02401; match to protein family HMM TIGR00216
YP_002729881.1	identified by match to protein family HMM PF07238
YP_002729882.1	identified by match to protein family HMM PF01618
YP_002729883.1	identified by match to protein family HMM PF00691
YP_002729884.1	identified by match to protein family HMM PF00691
YP_002729885.1	identified by match to protein family HMM PF02475
YP_002729886.1	identified by match to protein family HMM PF05175; match to protein family HMM TIGR00536; match to protein family HMM TIGR03534
YP_002729887.1	identified by match to protein family HMM PF00275; match to protein family HMM TIGR01072
YP_002729888.1	identified by match to protein family HMM PF00140; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937
YP_002729889.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_002729890.1	identified by match to protein family HMM PF00515; match to protein family HMM PF07719
YP_002729891.1	identified by Glimmer3
YP_002729893.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_002729894.1	identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002729895.1	identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200
YP_002729896.1	identified by match to protein family HMM PF00571; match to protein family HMM PF02163
YP_002729898.1	identified by match to protein family HMM PF00691
YP_002729899.1	identified by Glimmer3
YP_002729900.1	identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064
YP_002729901.1	identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066
YP_002729902.1	identified by match to protein family HMM PF04107; match to protein family HMM TIGR02050
YP_002729903.1	identified by match to protein family HMM PF01957
YP_002729904.1	identified by match to protein family HMM PF03063; match to protein family HMM TIGR01702
YP_002729905.1	identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044
YP_002729906.1	identified by match to protein family HMM PF01597; match to protein family HMM TIGR00527
YP_002729907.1	identified by match to protein family HMM PF01842
YP_002729908.1	identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079
YP_002729911.1	identified by match to protein family HMM PF01875
YP_002729912.1	identified by match to protein family HMM PF01871; match to protein family HMM TIGR00296
YP_002729913.1	identified by match to protein family HMM PF00210
YP_002729914.1	identified by match to protein family HMM PF00484
YP_002729915.1	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway
YP_002729919.1	identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836
YP_002729920.1	identified by match to protein family HMM PF00149; match to protein family HMM TIGR00282
YP_002729921.1	identified by match to protein family HMM PF08668
YP_002729922.1	identified by match to protein family HMM PF04166; match to protein family HMM TIGR00557
YP_002729923.1	identified by Glimmer3
YP_002729924.1	identified by Glimmer3
YP_002729926.1	identified by match to protein family HMM PF01206
YP_002729927.1	identified by match to protein family HMM PF00899; match to protein family HMM PF05237
YP_002729928.1	identified by match to protein family HMM PF03060
YP_002729929.1	identified by Glimmer3
YP_002729930.1	identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644
YP_002729931.1	identified by match to protein family HMM PF00578; match to protein family HMM PF08534
YP_002729932.1	identified by Glimmer3
YP_002729933.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_002729934.1	identified by match to protein family HMM PF02637; match to protein family HMM PF09424
YP_002729935.1	identified by match to protein family HMM PF02674
YP_002729936.1	identified by Glimmer3
YP_002729938.1	identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054
YP_002729939.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_002729941.1	identified by match to protein family HMM PF00037
YP_002729942.1	identified by match to protein family HMM PF00329; match to protein family HMM PF00346
YP_002729943.1	identified by match to protein family HMM PF04608
YP_002729945.1	identified by match to protein family HMM PF04371
YP_002729946.1	identified by match to protein family HMM PF08239
YP_002729947.1	identified by match to protein family HMM PF00383
YP_002729948.1	identified by match to protein family HMM PF02224; match to protein family HMM TIGR00017
YP_002729949.1	identified by match to protein family HMM PF00723
YP_002729950.1	identified by match to protein family HMM PF02597; match to protein family HMM TIGR01682; match to protein family HMM TIGR01687
YP_002729951.1	identified by match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR01508
YP_002729952.1	identified by match to protein family HMM PF01066
YP_002729953.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_002729954.1	identified by Glimmer3
YP_002729955.1	identified by match to protein family HMM PF01842; match to protein family HMM TIGR00119
YP_002729956.1	identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR00118
YP_002729957.1	TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine
YP_002729958.1	identified by match to protein family HMM PF00999
YP_002729959.1	identified by match to protein family HMM PF02391
YP_002729961.1	identified by match to protein family HMM PF00155
YP_002729962.1	identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478
YP_002729963.1	identified by match to protein family HMM PF00126; match to protein family HMM PF03466
YP_002729964.1	identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393
YP_002729965.1	identified by match to protein family HMM PF04468
YP_002729967.1	identified by match to protein family HMM PF02223; match to protein family HMM TIGR00041
YP_002729968.1	identified by match to protein family HMM PF01106; match to protein family HMM PF01883
YP_002729969.1	identified by match to protein family HMM PF03710
YP_002729970.1	identified by match to protein family HMM PF00089; match to protein family HMM PF00595
YP_002729971.1	identified by match to protein family HMM PF00140; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937
YP_002729973.1	identified by match to protein family HMM PF09335
YP_002729974.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
YP_002729975.1	identified by match to protein family HMM PF00202; match to protein family HMM TIGR00707
YP_002729976.1	identified by match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM PF08206; match to protein family HMM TIGR00358; match to protein family HMM TIGR02063
YP_002729977.1	identified by match to protein family HMM PF00430
YP_002729978.1	identified by match to protein family HMM PF00430
YP_002729979.1	identified by match to protein family HMM PF00213; match to protein family HMM TIGR01145
YP_002729980.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_002729981.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
YP_002729982.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_002729984.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_002729985.1	identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225
YP_002729986.1	identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002729987.1	identified by match to protein family HMM PF00753
YP_002729988.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_002729989.1	identified by match to protein family HMM PF00119; match to protein family HMM TIGR01131
YP_002729990.1	identified by Glimmer3
YP_002729991.1	identified by match to protein family HMM PF00137; match to protein family HMM TIGR01260
YP_002729992.1	in Escherichia coli transcription of this gene is enhanced by polyamines
YP_002729993.1	identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278
YP_002729994.1	identified by match to protein family HMM PF02096; match to protein family HMM TIGR03592; match to protein family HMM TIGR03593
YP_002729995.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_002729996.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_002729997.1	identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105
YP_002729998.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_002729999.1	identified by Glimmer3
YP_002730000.1	identified by Glimmer3
YP_002730001.1	identified by Glimmer3
YP_002730002.1	identified by Glimmer3
YP_002730003.1	identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM PF04073; match to protein family HMM TIGR00409
YP_002730004.1	identified by match to protein family HMM PF01590
YP_002730005.1	identified by match to protein family HMM PF00437; match to protein family HMM PF05157
YP_002730006.1	identified by match to protein family HMM PF01555
YP_002730007.1	identified by Glimmer3
YP_002730008.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_002730009.1	identified by Glimmer3
YP_002730010.1	identified by match to protein family HMM PF00375
YP_002730011.1	identified by match to protein family HMM PF03547
YP_002730013.1	identified by match to protein family HMM PF00266
YP_002730015.1	identified by match to protein family HMM PF00814
YP_002730016.1	identified by match to protein family HMM PF02541
YP_002730017.1	identified by match to protein family HMM PF09383
YP_002730018.1	identified by match to protein family HMM PF02597; match to protein family HMM TIGR01687
YP_002730019.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_002730020.1	identified by match to protein family HMM PF00478; match to protein family HMM PF00571; match to protein family HMM TIGR01302
YP_002730021.1	identified by Glimmer3
YP_002730023.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
YP_002730024.1	identified by match to protein family HMM PF00459
YP_002730025.1	identified by match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842; match to protein family HMM TIGR01807
YP_002730026.1	identified by match to protein family HMM PF03739
YP_002730027.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_002730028.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_002730029.1	Catalyzes the phosphorylation of UMP to UDP
YP_002730030.1	identified by match to protein family HMM PF01765; match to protein family HMM TIGR00496
YP_002730031.1	identified by match to protein family HMM PF02576; similar to protein aq_260
YP_002730032.1	identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF08529; match to protein family HMM TIGR01953
YP_002730033.1	identified by match to protein family HMM PF01248
YP_002730034.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_002730035.1	identified by match to protein family HMM PF07238
YP_002730036.1	identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732
YP_002730037.1	identified by match to protein family HMM PF00324; match to protein family HMM PF03845
YP_002730038.1	identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; match to protein family HMM TIGR03591
YP_002730039.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_002730040.1	identified by Glimmer3
YP_002730042.1	identified by match to protein family HMM PF01402
YP_002730044.1	identified by match to protein family HMM PF09369
YP_002730045.1	identified by match to protein family HMM PF00271
YP_002730046.1	identified by match to protein family HMM PF00633
YP_002730047.1	identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675
YP_002730048.1	identified by Glimmer3
YP_002730049.1	identified by match to protein family HMM PF08495
YP_002730050.1	identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002730051.1	identified by match to protein family HMM PF00005
YP_002730052.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_002730053.1	identified by match to protein family HMM PF02558; match to protein family HMM PF08546; match to protein family HMM TIGR00745
YP_002730054.1	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs
YP_002730055.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_002730056.1	identified by Glimmer3
YP_002730057.1	identified by Glimmer3
YP_002730058.1	identified by Glimmer3
YP_002730059.1	identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197
YP_002730062.1	identified by match to protein family HMM PF00316
YP_002730063.1	identified by match to protein family HMM PF00563
YP_002730064.1	identified by match to protein family HMM PF00107; match to protein family HMM PF08240
YP_002730065.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
YP_002730066.1	identified by match to protein family HMM PF02641
YP_002730067.1	identified by Glimmer3
YP_002730068.1	identified by match to protein family HMM PF00011; match to protein family HMM PF04969
YP_002730069.1	identified by Glimmer3
YP_002730070.1	identified by match to protein family HMM PF00425; match to protein family HMM PF04715; match to protein family HMM TIGR00564
YP_002730071.1	catalyzes the formation of succinate and diaminoheptanedioate from succinyldiaminoheptanedioate
YP_002730072.1	identified by match to protein family HMM PF01614
YP_002730073.1	identified by match to protein family HMM PF04055
YP_002730074.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002730075.1	identified by match to protein family HMM PF03479
YP_002730076.1	identified by match to protein family HMM PF03350
YP_002730077.1	identified by match to protein family HMM PF01578
YP_002730078.1	identified by match to protein family HMM PF00156; match to protein family HMM TIGR00336
YP_002730079.1	identified by match to protein family HMM PF00795
YP_002730080.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_002730081.1	identified by match to protein family HMM PF00116
YP_002730082.1	identified by match to protein family HMM PF00115
YP_002730085.1	identified by match to protein family HMM PF00580
YP_002730088.1	identified by match to protein family HMM PF00027; match to protein family HMM PF00325
YP_002730089.1	identified by match to protein family HMM PF04055; match to protein family HMM TIGR02495
YP_002730090.1	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates
YP_002730091.1	periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC
YP_002730092.1	part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway
YP_002730093.1	part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA
YP_002730094.1	identified by match to protein family HMM PF03892
YP_002730095.1	identified by match to protein family HMM PF00037
YP_002730097.1	identified by match to protein family HMM PF03927
YP_002730099.1	identified by match to protein family HMM PF02239
YP_002730100.1	identified by match to protein family HMM PF00034; match to protein family HMM PF02239
YP_002730101.1	identified by match to protein family HMM PF04055
YP_002730102.1	identified by match to protein family HMM PF02239
YP_002730103.1	identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469
YP_002730105.1	identified by match to protein family HMM PF02830
YP_002730108.1	identified by Glimmer3
YP_002730109.1	identified by match to protein family HMM PF07883
YP_002730111.1	identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738
YP_002730112.1	identified by match to protein family HMM PF01814
YP_002730114.1	identified by match to protein family HMM PF01487; match to protein family HMM TIGR01093
YP_002730115.1	identified by match to protein family HMM PF01258
YP_002730116.1	identified by match to protein family HMM PF00857
YP_002730117.1	protein 1243; identified by match to protein family HMM PF01906
YP_002730118.1	identified by match to protein family HMM PF00476; match to protein family HMM PF01612
YP_002730119.1	identified by match to protein family HMM PF00023
YP_002730120.1	identified by match to protein family HMM TIGR00613
YP_002730122.1	identified by match to protein family HMM PF06745
YP_002730123.1	identified by match to protein family HMM PF01242
YP_002730124.1	identified by Glimmer3
YP_002730125.1	identified by Glimmer3
YP_002730126.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_002730127.1	identified by match to protein family HMM PF01658; match to protein family HMM PF07994
YP_002730129.1	identified by match to protein family HMM PF01361; match to protein family HMM TIGR00013
YP_002730130.1	identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954
YP_002730131.1	identified by match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492
YP_002730132.1	identified by match to protein family HMM PF00403
YP_002730133.1	identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525
YP_002730134.1	identified by match to protein family HMM PF03009
YP_002730135.1	identified by match to protein family HMM PF00266
YP_002730136.1	identified by match to protein family HMM PF00300
YP_002730137.1	identified by match to protein family HMM PF00587
YP_002730138.1	identified by match to protein family HMM PF00254
YP_002730139.1	identified by match to protein family HMM PF04055; match to protein family HMM TIGR00238
YP_002730140.1	identified by Glimmer3
YP_002730141.1	identified by match to protein family HMM TIGR00725
YP_002730142.1	identified by match to protein family HMM PF01155; match to protein family HMM TIGR00100
YP_002730144.1	identified by match to protein family HMM PF00593; match to protein family HMM PF07715
YP_002730146.1	identified by match to protein family HMM PF06230
YP_002730147.1	identified by match to protein family HMM PF00132; match to protein family HMM TIGR01852
YP_002730148.1	identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068
YP_002730149.1	identified by match to protein family HMM PF01022
YP_002730150.1	identified by match to protein family HMM PF02754
YP_002730151.1	identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384
YP_002730152.1	NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis
YP_002730153.1	identified by match to protein family HMM PF00348
YP_002730154.1	identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252
YP_002730155.1	identified by match to protein family HMM PF01351
YP_002730156.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_002730157.1	identified by match to protein family HMM PF00578; match to protein family HMM PF08534
YP_002730158.1	identified by match to protein family HMM PF01502; match to protein family HMM PF01503; match to protein family HMM TIGR03188
YP_002730159.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_002730161.1	identified by match to protein family HMM PF02577
YP_002730162.1	identified by match to protein family HMM PF00023
YP_002730163.1	identified by match to protein family HMM PF00023
YP_002730164.1	identified by match to protein family HMM PF00023
YP_002730165.1	identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01296
YP_002730166.1	identified by Glimmer3
YP_002730167.1	identified by match to protein family HMM PF07719; match to protein family HMM PF07720
YP_002730168.1	identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055
YP_002730169.1	identified by match to protein family HMM PF01148
YP_002730170.1	identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423; match to protein family HMM TIGR03699
YP_002730172.1	identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368
YP_002730173.1	identified by match to protein family HMM PF02673; match to protein family HMM TIGR00753
YP_002730174.1	identified by Glimmer3
YP_002730175.1	identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212
YP_002730176.1	identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002730177.1	identified by match to protein family HMM PF03150
YP_002730178.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_002730179.1	identified by match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078
YP_002730180.1	identified by match to protein family HMM PF03653; match to protein family HMM TIGR00701
YP_002730182.1	identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049
YP_002730183.1	identified by match to protein family HMM PF01343; match to protein family HMM TIGR00706
YP_002730184.1	identified by match to protein family HMM PF02033; match to protein family HMM TIGR00082
YP_002730185.1	identified by match to protein family HMM PF04456
YP_002730186.1	identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010
YP_002730187.1	identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM TIGR01241
YP_002730188.1	identified by match to protein family HMM PF01171; match to protein family HMM PF06508; match to protein family HMM PF09179; match to protein family HMM TIGR02432; match to protein family HMM TIGR02433
YP_002730189.1	identified by match to protein family HMM PF01649; match to protein family HMM TIGR00029
YP_002730190.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP
YP_002730191.1	identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF08376
YP_002730192.1	catalyzes the magnesium and ATP-dependent positive supercoiling of DNA; contains helicase and topoisomerase domains
YP_002730193.1	identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993
YP_002730194.1	identified by match to protein family HMM PF00534
YP_002730195.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDsubunit As and two PyrK subunits
YP_002730196.1	identified by match to protein family HMM PF01432
YP_002730197.1	identified by match to protein family HMM PF03992
YP_002730198.1	identified by match to protein family HMM PF00016
YP_002730199.1	identified by match to protein family HMM TIGR01488; match to protein family HMM TIGR01489
YP_002730200.1	identified by match to protein family HMM PF00034
YP_002730201.1	identified by match to protein family HMM PF00115
YP_002730202.1	identified by match to protein family HMM PF02433
YP_002730203.1	identified by Glimmer3
YP_002730205.1	identified by match to protein family HMM PF01694
YP_002730206.1	identified by match to protein family HMM PF00041
YP_002730207.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
YP_002730209.1	identified by match to protein family HMM PF02630
YP_002730210.1	identified by match to protein family HMM PF01618
YP_002730211.1	identified by match to protein family HMM PF02472
YP_002730212.1	identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352
YP_002730213.1	identified by match to protein family HMM PF00075
YP_002730214.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_002730215.1	identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758
YP_002730216.1	identified by match to protein family HMM PF00215; match to protein family HMM TIGR01740
YP_002730217.1	identified by match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395
YP_002730218.1	identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741
YP_002730219.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_002730220.1	forms a direct contact with the tRNA during translation
YP_002730221.1	identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01850
YP_002730222.1	identified by match to protein family HMM PF00294; match to protein family HMM TIGR02198
YP_002730223.1	identified by match to protein family HMM PF02700; match to protein family HMM TIGR00302
YP_002730224.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_002730225.1	identified by match to protein family HMM PF00578; match to protein family HMM PF08534
YP_002730226.1	dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate
YP_002730228.1	identified by match to protein family HMM PF00577; match to protein family HMM PF05036
YP_002730229.1	identified by Glimmer3
YP_002730230.1	identified by Glimmer3
YP_002730231.1	identified by Glimmer3
YP_002730232.1	identified by match to protein family HMM PF05229
YP_002730234.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
YP_002730235.1	identified by match to protein family HMM PF02366
YP_002730236.1	identified by match to protein family HMM PF00005; match to protein family HMM PF00664
YP_002730238.1	identified by match to protein family HMM PF01569
YP_002730239.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
YP_002730240.1	identified by match to protein family HMM PF01520
YP_002730241.1	identified by match to protein family HMM PF03309; match to protein family HMM TIGR00671
YP_002730242.1	identified by Glimmer3
YP_002730243.1	identified by Glimmer3
YP_002730244.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
YP_002730246.1	identified by match to protein family HMM PF01368; match to protein family HMM PF02272
YP_002730247.1	identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083
YP_002730248.1	identified by match to protein family HMM PF01367; match to protein family HMM PF02739
YP_002730249.1	identified by match to protein family HMM PF01551
YP_002730250.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_002730251.1	identified by match to protein family HMM PF04452; match to protein family HMM TIGR00046
YP_002730252.1	identified by match to protein family HMM PF00950
YP_002730253.1	identified by match to protein family HMM PF00005
YP_002730254.1	identified by match to protein family HMM PF00107; match to protein family HMM PF08240
YP_002730255.1	identified by match to protein family HMM PF01926; match to protein family HMM PF02421; match to protein family HMM PF07664; match to protein family HMM PF07670; match to protein family HMM PF08477; match to protein family HMM TIGR00231; match to protein family HMM TIGR00437
YP_002730256.1	identified by match to protein family HMM PF04023
YP_002730257.1	identified by match to protein family HMM PF02163
YP_002730258.1	identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01143
YP_002730259.1	identified by Glimmer3
YP_002730260.1	identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534
YP_002730262.1	identified by Glimmer3
YP_002730263.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002730264.1	identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF09369
YP_002730265.1	identified by match to protein family HMM PF02146
YP_002730267.1	identified by Glimmer3
YP_002730268.1	identified by Glimmer3
YP_002730269.1	identified by match to protein family HMM PF01464
YP_002730272.1	identified by Glimmer3
YP_002730273.1	identified by match to protein family HMM PF00515; match to protein family HMM PF07719
YP_002730275.1	identified by Glimmer3
YP_002730276.1	identified by Glimmer3
YP_002730277.1	identified by match to protein family HMM PF02633
YP_002730278.1	identified by match to protein family HMM PF00633
YP_002730279.1	identified by match to protein family HMM PF09376
YP_002730280.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
YP_002730281.1	identified by match to protein family HMM PF01935
YP_002730282.1	required for 70S ribosome assembly
YP_002730283.1	identified by match to protein family HMM PF00571; match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002730284.1	identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01125
YP_002730285.1	identified by match to protein family HMM PF01008; match to protein family HMM TIGR00512; match to protein family HMM TIGR00524
YP_002730286.1	identified by match to protein family HMM PF01933; match to protein family HMM TIGR01826; similar to protein aq_778
YP_002730287.1	identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; match to protein family HMM PF07992; match to protein family HMM TIGR00551
YP_002730288.1	identified by match to protein family HMM PF00707; match to protein family HMM TIGR00168
YP_002730289.1	identified by match to protein family HMM PF07992
YP_002730290.1	identified by match to protein family HMM PF01066
YP_002730291.1	identified by match to protein family HMM PF00697
YP_002730293.1	identified by match to protein family HMM PF00515; match to protein family HMM PF07719
YP_002730294.1	identified by match to protein family HMM PF00582
YP_002730295.1	identified by match to protein family HMM PF00694; match to protein family HMM TIGR02084; match to protein family HMM TIGR02087
YP_002730296.1	identified by match to protein family HMM PF00389; match to protein family HMM PF02826
YP_002730297.1	identified by match to protein family HMM PF00106; match to protein family HMM PF07993; match to protein family HMM PF08659; match to protein family HMM TIGR01830
YP_002730298.1	carries the fatty acid chain in fatty acid biosynthesis
YP_002730299.1	identified by match to protein family HMM PF00109; match to protein family HMM PF02801; match to protein family HMM TIGR03150
YP_002730300.1	identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191
YP_002730301.1	identified by match to protein family HMM PF02366
YP_002730302.1	identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728
YP_002730303.1	identified by Glimmer3
YP_002730304.1	identified by match to protein family HMM PF00672
YP_002730305.1	identified by Glimmer3
YP_002730306.1	identified by match to protein family HMM PF01077; match to protein family HMM PF01206; match to protein family HMM PF03460
YP_002730308.1	identified by match to protein family HMM PF01507; match to protein family HMM TIGR00434
YP_002730309.1	identified by match to protein family HMM PF01925
YP_002730310.1	identified by match to protein family HMM PF00398; match to protein family HMM TIGR00755
YP_002730311.1	identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099
YP_002730312.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_002730313.1	identified by Glimmer3
YP_002730314.1	identified by match to protein family HMM PF01075
YP_002730315.1	identified by match to protein family HMM PF00515; match to protein family HMM PF07719
YP_002730316.1	identified by Glimmer3
YP_002730317.1	identified by match to protein family HMM PF02775
YP_002730318.1	identified by match to protein family HMM PF01855
YP_002730319.1	identified by match to protein family HMM PF00037; match to protein family HMM TIGR02179
YP_002730320.1	identified by match to protein family HMM PF01558; match to protein family HMM TIGR02175
YP_002730321.1	identified by match to protein family HMM PF01751; match to protein family HMM PF02132; match to protein family HMM TIGR00615
YP_002730322.1	identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103
YP_002730323.1	identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397
YP_002730324.1	identified by match to protein family HMM PF01926
YP_002730325.1	identified by match to protein family HMM PF03968; match to protein family HMM PF04453
YP_002730326.1	identified by match to protein family HMM PF01614; match to protein family HMM PF09339
YP_002730327.1	identified by match to protein family HMM PF01715; match to protein family HMM TIGR00174
YP_002730328.1	identified by match to protein family HMM PF01423; match to protein family HMM TIGR02383
YP_002730329.1	identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR03156
YP_002730330.1	identified by match to protein family HMM PF01230
YP_002730331.1	identified by match to protein family HMM PF01206
YP_002730332.1	identified by match to protein family HMM PF08220; match to protein family HMM PF08279
YP_002730333.1	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis
YP_002730334.1	identified by match to protein family HMM PF01695
YP_002730335.1	identified by Glimmer3
YP_002730336.1	identified by match to protein family HMM PF00440
YP_002730337.1	identified by match to protein family HMM PF02272
YP_002730338.1	identified by match to protein family HMM PF00268
YP_002730339.1	identified by Glimmer3
YP_002730340.1	identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM TIGR02506
YP_002730341.1	identified by Glimmer3
YP_002730344.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_002730345.1	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine
YP_002730346.1	identified by Glimmer3
YP_002730347.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_002730348.1	identified by match to protein family HMM PF00438; match to protein family HMM PF02772; match to protein family HMM PF02773; match to protein family HMM TIGR01034
YP_002730350.1	identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350
YP_002730352.1	identified by match to protein family HMM PF00263
YP_002730353.1	identified by Glimmer3
YP_002730354.1	identified by Glimmer3
YP_002730355.1	identified by match to protein family HMM PF05137
YP_002730356.1	identified by Glimmer3
YP_002730357.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_002730358.1	identified by match to protein family HMM PF02092; match to protein family HMM PF05746; match to protein family HMM TIGR00211
YP_002730359.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_002730360.1	catalyzes the modification of U13 in tRNA(Glu)
YP_002730361.1	identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074
YP_002730362.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_002730363.1	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance
YP_002730364.1	identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879
YP_002730365.1	identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002730367.1	identified by match to protein family HMM PF07715
YP_002730368.1	identified by match to protein family HMM PF02348; match to protein family HMM TIGR00466
YP_002730369.1	identified by Glimmer3
YP_002730370.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
YP_002730371.1	identified by match to protein family HMM PF00753; match to protein family HMM PF07521
YP_002730373.1	identified by match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM TIGR00460
YP_002730374.1	identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186
YP_002730375.1	identified by match to protein family HMM PF00355; match to protein family HMM TIGR01409; match to protein family HMM TIGR01416
YP_002730376.1	identified by match to protein family HMM PF00032; match to protein family HMM PF00033
YP_002730378.1	identified by match to protein family HMM PF01210; match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR00112
YP_002730379.1	identified by match to protein family HMM PF00929; match to protein family HMM TIGR00573
YP_002730380.1	identified by match to protein family HMM PF00999
YP_002730381.1	identified by match to protein family HMM PF02080; match to protein family HMM PF02254
YP_002730383.1	identified by Glimmer3
YP_002730384.1	identified by match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; match to protein family HMM TIGR00456
YP_002730385.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_002730386.1	identified by match to protein family HMM PF00501; match to protein family HMM TIGR02188
YP_002730387.1	heat shock protein involved in degradation of misfolded proteins
YP_002730389.1	identified by match to protein family HMM PF01037
YP_002730391.1	identified by Glimmer3
YP_002730392.1	identified by Glimmer3
YP_002730393.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_002730394.1	identified by match to protein family HMM PF00595; match to protein family HMM PF01433; match to protein family HMM PF04187
YP_002730395.1	identified by match to protein family HMM PF00206; match to protein family HMM TIGR00928
YP_002730396.1	identified by match to protein family HMM PF00633; match to protein family HMM PF00730
YP_002730397.1	identified by Glimmer3
YP_002730398.1	identified by match to protein family HMM PF00795; match to protein family HMM PF02540; match to protein family HMM TIGR00552
YP_002730399.1	identified by match to protein family HMM PF00563; match to protein family HMM PF08668
YP_002730400.1	identified by Glimmer3
YP_002730401.1	identified by Glimmer3
YP_002730402.1	identified by Glimmer3
YP_002730403.1	identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691
YP_002730404.1	identified by match to protein family HMM PF02660; match to protein family HMM TIGR00023
YP_002730405.1	identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560
YP_002730406.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
YP_002730407.1	identified by match to protein family HMM PF02491; match to protein family HMM TIGR01174
YP_002730408.1	identified by match to protein family HMM PF08478
YP_002730409.1	identified by match to protein family HMM PF01071; match to protein family HMM PF01820; match to protein family HMM PF02222; match to protein family HMM PF02655; match to protein family HMM PF07478; match to protein family HMM PF08443; match to protein family HMM TIGR01205
YP_002730410.1	identified by match to protein family HMM PF01565; match to protein family HMM PF02873; match to protein family HMM TIGR00179
YP_002730411.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_002730412.1	identified by match to protein family HMM PF01098
YP_002730413.1	identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01087
YP_002730414.1	catalyzes the formation of oxaloacetate from pyruvate
YP_002730415.1	identified by Glimmer3
YP_002730416.1	identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01316
YP_002730417.1	identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658
YP_002730418.1	identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670
YP_002730419.1	identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254
YP_002730420.1	identified by match to protein family HMM PF01509; match to protein family HMM PF09157; match to protein family HMM TIGR00431
YP_002730421.1	identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01499
YP_002730422.1	identified by match to protein family HMM PF01790; match to protein family HMM TIGR00544
YP_002730423.1	identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079
YP_002730424.1	identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163
YP_002730425.1	identified by match to protein family HMM PF01148
YP_002730426.1	identified by match to protein family HMM PF01883
YP_002730427.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
YP_002730428.1	identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227
YP_002730429.1	identified by match to protein family HMM PF00565
YP_002730430.1	identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162
YP_002730431.1	identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898
YP_002730432.1	identified by match to protein family HMM PF01416; match to protein family HMM TIGR00071
YP_002730433.1	identified by match to protein family HMM PF01926; match to protein family HMM PF07650; match to protein family HMM TIGR00231; match to protein family HMM TIGR00436
YP_002730434.1	identified by match to protein family HMM PF00571; match to protein family HMM PF01769; match to protein family HMM PF03448; match to protein family HMM TIGR00400
YP_002730435.1	identified by match to protein family HMM PF00015
YP_002730436.1	catalyzes the formation of L-tryptophan from indole and L-serine
YP_002730437.1	identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128
YP_002730438.1	identified by match to protein family HMM TIGR00347
YP_002730439.1	identified by match to protein family HMM PF01904
YP_002730441.1	identified by match to protein family HMM PF05866
YP_002730442.1	identified by match to protein family HMM PF00581
YP_002730444.1	identified by Glimmer3
YP_002730445.1	identified by Glimmer3
YP_002730446.1	identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01409
YP_002730447.1	identified by match to protein family HMM TIGR03478
YP_002730448.1	identified by match to protein family HMM PF09459
YP_002730449.1	identified by Glimmer3
YP_002730450.1	identified by match to protein family HMM PF00037
YP_002730451.1	identified by match to protein family HMM PF03916
YP_002730452.1	identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409
YP_002730454.1	identified by match to protein family HMM PF00037
YP_002730455.1	identified by match to protein family HMM PF03349
YP_002730456.1	identified by match to protein family HMM PF02036
YP_002730457.1	identified by match to protein family HMM PF03601; match to protein family HMM TIGR00698
YP_002730459.1	identified by match to protein family HMM PF01230
YP_002730460.1	identified by Glimmer3
YP_002730461.1	identified by match to protein family HMM PF03061
YP_002730462.1	identified by match to protein family HMM PF00905; match to protein family HMM PF03717
YP_002730463.1	identified by match to protein family HMM PF04977; match to protein family HMM TIGR02209
YP_002730464.1	identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006
YP_002730465.1	identified by match to protein family HMM PF00753
YP_002730466.1	identified by Glimmer3
YP_002730467.1	identified by Glimmer3
YP_002730468.1	identified by match to protein family HMM PF00005
YP_002730469.1	identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730
YP_002730470.1	identified by match to protein family HMM PF02321
YP_002730471.1	identified by Glimmer3
YP_002730472.1	identified by match to protein family HMM PF00133; match to protein family HMM PF06827; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00392
YP_002730473.1	identified by match to protein family HMM PF00216
YP_002730474.1	identified by match to protein family HMM PF08645; match to protein family HMM TIGR00213; match to protein family HMM TIGR01656; match to protein family HMM TIGR01662
YP_002730475.1	identified by Glimmer3
YP_002730476.1	identified by Glimmer3
YP_002730477.1	identified by match to protein family HMM PF02943
YP_002730478.1	identified by Glimmer3
YP_002730479.1	identified by match to protein family HMM PF00374
YP_002730480.1	identified by match to protein family HMM PF01058
YP_002730481.1	identified by match to protein family HMM PF00175; match to protein family HMM PF00970
YP_002730483.1	identified by match to protein family HMM PF01058; match to protein family HMM PF08425; match to protein family HMM TIGR00391; match to protein family HMM TIGR01409
YP_002730484.1	identified by match to protein family HMM PF00374
YP_002730485.1	identified by match to protein family HMM PF01292
YP_002730487.1	identified by match to protein family HMM PF00092
YP_002730488.1	identified by Glimmer3
YP_002730489.1	identified by match to protein family HMM PF00092
YP_002730490.1	identified by match to protein family HMM PF07726; match to protein family HMM PF07728
YP_002730492.1	identified by match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HMM TIGR00143
YP_002730493.1	identified by Glimmer3
YP_002730494.1	identified by match to protein family HMM PF01312; match to protein family HMM TIGR00328
YP_002730495.1	identified by match to protein family HMM PF01311
YP_002730496.1	identified by match to protein family HMM PF01313; match to protein family HMM TIGR01402
YP_002730497.1	identified by match to protein family HMM PF00813; match to protein family HMM TIGR01103
YP_002730498.1	identified by Glimmer3
YP_002730499.1	identified by match to protein family HMM PF01052
YP_002730500.1	identified by match to protein family HMM PF03748
YP_002730501.1	identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM PF07559; match to protein family HMM TIGR03506
YP_002730502.1	identified by match to protein family HMM PF03963
YP_002730503.1	identified by match to protein family HMM PF00006; match to protein family HMM PF02874; match to protein family HMM TIGR01026; match to protein family HMM TIGR03496
YP_002730504.1	identified by Glimmer3
YP_002730505.1	identified by match to protein family HMM PF01514; match to protein family HMM PF08345; match to protein family HMM TIGR00206
YP_002730506.1	identified by match to protein family HMM PF02049; match to protein family HMM TIGR00205
YP_002730507.1	identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR01395
YP_002730508.1	identified by match to protein family HMM TIGR01396
YP_002730510.1	identified by Glimmer3
YP_002730511.1	identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937
YP_002730512.1	identified by match to protein family HMM PF01656
YP_002730513.1	identified by match to protein family HMM PF00448; match to protein family HMM TIGR03499
YP_002730514.1	identified by match to protein family HMM PF00771; match to protein family HMM TIGR01398
YP_002730516.1	identified by match to protein family HMM PF02119
YP_002730517.1	identified by match to protein family HMM PF02107
YP_002730518.1	identified by match to protein family HMM PF08666; match to protein family HMM TIGR03170
YP_002730519.1	identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR02488; match to protein family HMM TIGR03506
YP_002730520.1	identified by match to protein family HMM PF00460; match to protein family HMM TIGR03506
YP_002730521.1	identified by match to protein family HMM PF01052; match to protein family HMM TIGR02480
YP_002730522.1	identified by match to protein family HMM PF01052; match to protein family HMM PF02154; match to protein family HMM TIGR01397
YP_002730523.1	identified by match to protein family HMM PF01706; match to protein family HMM TIGR00207
YP_002730524.1	identified by Glimmer3
YP_002730525.1	identified by match to protein family HMM PF00015; match to protein family HMM PF00672
YP_002730526.1	identified by match to protein family HMM PF00015
YP_002730527.1	identified by match to protein family HMM PF00072
YP_002730528.1	identified by match to protein family HMM PF00072; match to protein family HMM PF01584
YP_002730529.1	identified by match to protein family HMM PF01584
YP_002730530.1	identified by match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895
YP_002730532.1	identified by match to protein family HMM PF00072; match to protein family HMM PF01339
YP_002730533.1	identified by match to protein family HMM PF01739
YP_002730535.1	identified by match to protein family HMM PF02040; match to protein family HMM PF03600
YP_002730536.1	identified by Glimmer3
YP_002730537.1	identified by match to protein family HMM PF01435
YP_002730538.1	identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254
YP_002730539.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_002730541.1	identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04851
YP_002730542.1	identified by match to protein family HMM PF00989; match to protein family HMM PF08447; match to protein family HMM TIGR00229
YP_002730543.1	identified by match to protein family HMM PF03091
YP_002730544.1	identified by match to protein family HMM PF01145
YP_002730545.1	identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728
YP_002730546.1	This protein performs the mismatch recognition step during the DNA repair process
YP_002730547.1	identified by match to protein family HMM PF01551
YP_002730548.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
YP_002730549.1	identified by match to protein family HMM PF02577
YP_002730550.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_002730551.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_002730552.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_002730553.1	identified by match to protein family HMM PF00155; match to protein family HMM TIGR03537
YP_002730554.1	identified by Glimmer3
YP_002730555.1	identified by match to protein family HMM PF00106
YP_002730556.1	identified by match to protein family HMM PF03631
YP_002730559.1	identified by Glimmer3
YP_002730560.1	identified by match to protein family HMM PF02566
YP_002730561.1	identified by match to protein family HMM PF01145
YP_002730562.1	identified by Glimmer3
YP_002730563.1	identified by Glimmer3
YP_002730564.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_002730565.1	identified by match to protein family HMM PF01596
YP_002730566.1	identified by match to protein family HMM PF00535
YP_002730567.1	identified by match to protein family HMM PF00535
YP_002730568.1	identified by match to protein family HMM PF04055; match to protein family HMM PF06463; match to protein family HMM TIGR02666
YP_002730569.1	identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096
YP_002730570.1	identified by Glimmer3
YP_002730571.1	identified by match to protein family HMM PF00133; match to protein family HMM PF09334; match to protein family HMM TIGR00396
YP_002730572.1	identified by match to protein family HMM PF01637
YP_002730573.1	identified by match to protein family HMM PF08264
YP_002730574.1	identified by match to protein family HMM PF00582
YP_002730576.1	identified by match to protein family HMM PF02517
YP_002730577.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_002730579.1	identified by match to protein family HMM PF04417
YP_002730580.1	identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002730581.1	identified by match to protein family HMM PF02834; match to protein family HMM TIGR02258
YP_002730582.1	identified by match to protein family HMM PF01964; match to protein family HMM TIGR00190
YP_002730583.1	identified by match to protein family HMM PF00512; match to protein family HMM PF02518
YP_002730584.1	identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954
YP_002730585.1	identified by match to protein family HMM PF00515; match to protein family HMM PF05036; match to protein family HMM PF07719
YP_002730586.1	identified by match to protein family HMM PF00535
YP_002730589.1	identified by match to protein family HMM PF00440
YP_002730590.1	identified by match to protein family HMM PF02321
YP_002730591.1	identified by match to protein family HMM PF00529
YP_002730592.1	identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711
YP_002730593.1	identified by match to protein family HMM PF00529
YP_002730594.1	identified by match to protein family HMM PF00924
YP_002730595.1	identified by match to protein family HMM PF00005
YP_002730596.1	identified by match to protein family HMM PF01451
YP_002730597.1	identified by match to protein family HMM PF01061
YP_002730598.1	identified by match to protein family HMM PF01061
YP_002730599.1	identified by match to protein family HMM PF01656
YP_002730600.1	identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180
YP_002730601.1	identified by match to protein family HMM PF07963; match to protein family HMM PF08334; match to protein family HMM TIGR01710; match to protein family HMM TIGR02532
YP_002730602.1	identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532
YP_002730603.1	identified by match to protein family HMM TIGR02532
YP_002730605.1	identified by Glimmer3
YP_002730606.1	identified by Glimmer3
YP_002730607.1	identified by Glimmer3
YP_002730608.1	identified by match to protein family HMM PF00082
YP_002730610.1	identified by match to protein family HMM PF00263; match to protein family HMM PF03958; match to protein family HMM TIGR02517
YP_002730611.1	identified by match to protein family HMM PF00437
YP_002730612.1	identified by match to protein family HMM PF00482
YP_002730613.1	identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242
YP_002730614.1	identified by match to protein family HMM PF00301
YP_002730615.1	identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; match to protein family HMM TIGR01691
YP_002730617.1	identified by match to protein family HMM PF01891
YP_002730621.1	identified by match to protein family HMM PF09339
YP_002730622.1	identified by match to protein family HMM PF07396
YP_002730623.1	identified by match to protein family HMM PF00501; match to protein family HMM TIGR02188
YP_002730624.1	identified by match to protein family HMM PF04341
YP_002730625.1	identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813
YP_002730626.1	identified by match to protein family HMM PF00027; match to protein family HMM PF00571; match to protein family HMM PF03445
YP_002730627.1	identified by match to protein family HMM PF00929
YP_002730628.1	identified by match to protein family HMM PF01637
YP_002730630.1	identified by Glimmer3
YP_002730631.1	identified by Glimmer3
YP_002730632.1	identified by match to protein family HMM PF07503
YP_002730633.1	identified by match to protein family HMM PF01139
YP_002730634.1	identified by match to protein family HMM PF00924
YP_002730637.1	identified by match to protein family HMM PF03965
YP_002730638.1	identified by match to protein family HMM PF01435; match to protein family HMM PF05569
YP_002730639.1	identified by match to protein family HMM PF02321
YP_002730640.1	identified by match to protein family HMM TIGR01730
YP_002730641.1	identified by match to protein family HMM PF00873; match to protein family HMM TIGR00914
YP_002730642.1	identified by Glimmer3
YP_002730643.1	identified by match to protein family HMM PF04055
YP_002730644.1	identified by match to protein family HMM PF00801
YP_002730645.1	identified by match to protein family HMM PF00289; match to protein family HMM PF02786; match to protein family HMM PF02787
YP_002730646.1	identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM PF03477; match to protein family HMM TIGR02504
YP_002730647.1	identified by match to protein family HMM PF02572
YP_002730648.1	identified by match to protein family HMM PF00440
YP_002730649.1	identified by match to protein family HMM PF09699; match to protein family HMM TIGR01905
YP_002730650.1	identified by match to protein family HMM PF02441; match to protein family HMM TIGR00421
YP_002730651.1	identified by match to protein family HMM PF00589; match to protein family HMM PF02899
YP_002730652.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_002730653.1	identified by match to protein family HMM PF01751
YP_002730655.1	identified by match to protein family HMM PF02642
YP_002730656.1	identified by match to protein family HMM PF00849; match to protein family HMM PF01479
YP_002730658.1	identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423; match to protein family HMM TIGR03700
YP_002730659.1	identified by Glimmer3
YP_002730660.1	identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297
YP_002730661.1	identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005
YP_002730662.1	identified by match to protein family HMM PF02463; match to protein family HMM TIGR00634
YP_002730663.1	identified by Glimmer3
YP_002730664.1	identified by match to protein family HMM PF02321
YP_002730665.1	identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730
YP_002730666.1	identified by match to protein family HMM PF00873; match to protein family HMM TIGR00914
YP_002730668.1	identified by match to protein family HMM PF01988
YP_002730669.1	identified by Glimmer3
YP_002730671.1	identified by match to protein family HMM PF00278; match to protein family HMM PF02784
YP_002730672.1	identified by match to protein family HMM PF01551; match to protein family HMM PF03253
YP_002730673.1	identified by Glimmer3
YP_002730674.1	identified by match to protein family HMM PF00515; match to protein family HMM PF07719
YP_002730675.1	identified by match to protein family HMM PF06094
YP_002730676.1	identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879
YP_002730677.1	identified by match to protein family HMM PF07690
YP_002730678.1	identified by match to protein family HMM PF01077; match to protein family HMM PF03460
YP_002730679.1	identified by match to protein family HMM PF00117
YP_002730680.1	identified by match to protein family HMM TIGR01470
YP_002730681.1	identified by match to protein family HMM PF01161; match to protein family HMM TIGR00481
YP_002730682.1	identified by match to protein family HMM PF01161; match to protein family HMM TIGR00481
YP_002730683.1	identified by match to protein family HMM PF00596
YP_002730684.1	identified by match to protein family HMM PF00578; match to protein family HMM PF08534
YP_002730685.1	identified by Glimmer3
YP_002730686.1	identified by Glimmer3
YP_002730687.1	identified by match to protein family HMM PF01739
YP_002730688.1	identified by match to protein family HMM PF00202; match to protein family HMM TIGR00508
YP_002730690.1	identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594; match to protein family HMM TIGR01443; match to protein family HMM TIGR01445
YP_002730691.1	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
YP_002730692.1	identified by match to protein family HMM PF02629
YP_002730693.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_002730694.1	identified by Glimmer3
YP_002730695.1	identified by match to protein family HMM PF00270; match to protein family HMM PF00271
YP_002730696.1	identified by match to protein family HMM PF00308; match to protein family HMM PF08299; match to protein family HMM TIGR00362
YP_002730698.1	identified by match to protein family HMM PF00923; match to protein family HMM TIGR00875
YP_002730699.1	identified by match to protein family HMM PF01551
YP_002730700.1	identified by match to protein family HMM PF00682; match to protein family HMM PF08502; match to protein family HMM TIGR00973
YP_002730701.1	identified by match to protein family HMM PF00374
YP_002730702.1	identified by match to protein family HMM PF01058
YP_002730703.1	identified by match to protein family HMM PF00440
YP_002730704.1	identified by match to protein family HMM PF00903
YP_002730705.1	identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073
YP_002730706.1	identified by match to protein family HMM PF01402; match to protein family HMM PF08753
YP_002730707.1	identified by match to protein family HMM PF00005
YP_002730708.1	identified by match to protein family HMM PF02754
YP_002730709.1	identified by Glimmer3
YP_002730710.1	identified by match to protein family HMM PF00158; match to protein family HMM PF02954
YP_002730712.1	identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394
YP_002730713.1	identified by Glimmer3
YP_002730714.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_002730715.1	identified by match to protein family HMM PF08447; match to protein family HMM TIGR00229
YP_002730716.1	identified by match to protein family HMM PF00702; match to protein family HMM TIGR01458; match to protein family HMM TIGR01460
YP_002730717.1	identified by Glimmer3
YP_002730718.1	identified by Glimmer3
YP_002730719.1	identified by match to protein family HMM PF00896; match to protein family HMM TIGR01694
YP_002730720.1	identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002730721.1	identified by match to protein family HMM PF01136
YP_002730722.1	involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water
YP_002730723.1	identified by match to protein family HMM PF00149
YP_002730724.1	identified by match to protein family HMM PF00801
YP_002730725.1	identified by match to protein family HMM PF03193; match to protein family HMM TIGR00157
YP_002730726.1	identified by match to protein family HMM PF01297
YP_002730727.1	identified by match to protein family HMM PF01729; match to protein family HMM PF04095; match to protein family HMM TIGR01513
YP_002730728.1	identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01082
YP_002730730.1	identified by match to protein family HMM PF01522
YP_002730731.1	identified by match to protein family HMM PF03458
YP_002730732.1	identified by match to protein family HMM PF03749; match to protein family HMM TIGR00230
YP_002730733.1	identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464
YP_002730734.1	identified by match to protein family HMM PF00034
YP_002730736.1	identified by Glimmer3
YP_002730737.1	identified by Glimmer3
YP_002730738.1	identified by match to protein family HMM PF00512; match to protein family HMM PF02518
YP_002730739.1	identified by match to protein family HMM PF00072; match to protein family HMM PF00486
YP_002730741.1	identified by match to protein family HMM PF00571; match to protein family HMM PF01368; match to protein family HMM PF01743; match to protein family HMM PF02272
YP_002730742.1	identified by match to protein family HMM PF03061; match to protein family HMM TIGR00051
YP_002730743.1	identified by Glimmer3
YP_002730744.1	identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880
YP_002730745.1	identified by match to protein family HMM PF01406; match to protein family HMM PF01588; match to protein family HMM PF09334; match to protein family HMM TIGR00398; match to protein family HMM TIGR00399
YP_002730746.1	identified by match to protein family HMM PF01257
YP_002730747.1	identified by match to protein family HMM PF01512
YP_002730748.1	identified by match to protein family HMM PF00141; match to protein family HMM TIGR00198
YP_002730749.1	identified by match to protein family HMM PF00155
YP_002730750.1	identified by match to protein family HMM PF01266; match to protein family HMM TIGR02352
YP_002730751.1	identified by match to protein family HMM PF00753
YP_002730752.1	identified by match to protein family HMM PF00106
YP_002730753.1	identified by Glimmer3
YP_002730754.1	identified by match to protein family HMM PF06347; match to protein family HMM PF08239
YP_002730755.1	identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002730756.1	identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532
YP_002730757.1	identified by match to protein family HMM PF07719
YP_002730758.1	identified by match to protein family HMM PF00263
YP_002730759.1	identified by Glimmer3
YP_002730760.1	identified by Glimmer3
YP_002730761.1	identified by Glimmer3
YP_002730762.1	identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532
YP_002730763.1	identified by match to protein family HMM PF00437; match to protein family HMM PF05157
YP_002730764.1	identified by match to protein family HMM PF00482
YP_002730765.1	identified by match to protein family HMM PF01734
YP_002730766.1	identified by match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556
YP_002730767.1	identified by match to protein family HMM PF01025
YP_002730768.1	identified by match to protein family HMM PF01936
YP_002730770.1	identified by match to protein family HMM PF00149
YP_002730771.1	identified by match to protein family HMM PF00248
YP_002730772.1	identified by match to protein family HMM PF01590; match to protein family HMM PF01966
YP_002730773.1	identified by Glimmer3
YP_002730774.1	identified by match to protein family HMM PF00211; match to protein family HMM PF05226
YP_002730775.1	identified by match to protein family HMM PF00753
YP_002730776.1	identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002730777.1	identified by match to protein family HMM PF00005; match to protein family HMM PF00664
YP_002730778.1	identified by match to protein family HMM PF00580
YP_002730779.1	identified by Glimmer3
YP_002730781.1	identified by match to protein family HMM PF01177; match to protein family HMM TIGR00067
YP_002730782.1	identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090
YP_002730783.1	identified by match to protein family HMM PF07719; match to protein family HMM TIGR03302; similar to protein aq_1273
YP_002730784.1	identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757
YP_002730786.1	identified by match to protein family HMM PF00400; match to protein family HMM PF08308
YP_002730787.1	identified by match to protein family HMM PF00156; match to protein family HMM PF00310; match to protein family HMM TIGR01134
YP_002730788.1	identified by match to protein family HMM PF00557; match to protein family HMM PF01321
YP_002730790.1	identified by match to protein family HMM PF00563
YP_002730791.1	identified by match to protein family HMM PF07238
YP_002730792.1	identified by Glimmer3
YP_002730793.1	identified by match to protein family HMM PF00881; match to protein family HMM TIGR03605
YP_002730794.1	identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR01934
YP_002730796.1	identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074
YP_002730797.1	identified by Glimmer3
YP_002730798.1	identified by match to protein family HMM PF01850
YP_002730799.1	identified by match to protein family HMM PF01924; match to protein family HMM TIGR00075
YP_002730800.1	identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM PF08282; match to protein family HMM TIGR01494
YP_002730801.1	identified by match to protein family HMM PF01699
YP_002730802.1	identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124
YP_002730803.1	identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072
YP_002730804.1	identified by match to protein family HMM PF02591
YP_002730805.1	identified by match to protein family HMM PF01678; match to protein family HMM TIGR00652
YP_002730806.1	identified by match to protein family HMM PF01475
YP_002730807.1	identified by match to protein family HMM PF03099; match to protein family HMM TIGR00214
YP_002730810.1	identified by match to protein family HMM PF00313
YP_002730811.1	identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093
YP_002730812.1	identified by Glimmer3
YP_002730814.1	identified by match to protein family HMM PF03412
YP_002730815.1	identified by Glimmer3
YP_002730816.1	identified by Glimmer3
YP_002730817.1	identified by Glimmer3
YP_002730818.1	identified by Glimmer3
YP_002730819.1	identified by Glimmer3
YP_002730820.1	identified by Glimmer3
YP_002730821.1	identified by Glimmer3
YP_002730822.1	identified by Glimmer3
YP_002730823.1	identified by Glimmer3
YP_002730824.1	identified by match to protein family HMM PF00528
YP_002730825.1	identified by match to protein family HMM PF00528
YP_002730827.1	identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518
YP_002730828.1	identified by match to protein family HMM PF00953; match to protein family HMM TIGR00445
YP_002730830.1	identified by Glimmer3
YP_002730831.1	identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810
YP_002730832.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
YP_002730833.1	identified by match to protein family HMM PF00300; match to protein family HMM TIGR01258
YP_002730835.1	identified by match to protein family HMM PF05175
YP_002730836.1	identified by match to protein family HMM PF02823; match to protein family HMM TIGR01216
YP_002730837.1	identified by match to protein family HMM PF01965
YP_002730840.1	identified by match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447
YP_002730841.1	identified by match to protein family HMM PF00939; match to protein family HMM PF03600; match to protein family HMM TIGR00785
YP_002730842.1	identified by match to protein family HMM PF00293
YP_002730843.1	identified by match to protein family HMM PF03279
YP_002730844.1	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway
YP_002730845.1	identified by Glimmer3
YP_002730846.1	identified by match to protein family HMM PF03477; match to protein family HMM TIGR00244
YP_002730847.1	identified by Glimmer3
YP_002730848.1	identified by match to protein family HMM PF09123
YP_002730849.1	identified by Glimmer3
YP_002730851.1	identified by match to protein family HMM PF00266
YP_002730853.1	identified by match to protein family HMM PF01592
YP_002730854.1	identified by match to protein family HMM PF02568
YP_002730855.1	identified by match to protein family HMM PF01206
YP_002730857.1	identified by match to protein family HMM PF01106
YP_002730858.1	identified by match to protein family HMM PF01488; match to protein family HMM PF08501; match to protein family HMM TIGR00507
YP_002730859.1	identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149
YP_002730860.1	identified by match to protein family HMM PF04493
YP_002730861.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_002730862.1	identified by match to protein family HMM PF08704
YP_002730864.1	identified by match to protein family HMM PF03446
YP_002730865.1	identified by match to protein family HMM PF00682; match to protein family HMM PF08502; match to protein family HMM TIGR00977
YP_002730866.1	identified by match to protein family HMM PF00561
YP_002730867.1	identified by match to protein family HMM PF02769; match to protein family HMM TIGR01379
YP_002730868.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_002730869.1	identified by match to protein family HMM PF00364; match to protein family HMM TIGR00531
YP_002730870.1	identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR02197
YP_002730871.1	identified by match to protein family HMM PF00288; match to protein family HMM PF08544; match to protein family HMM TIGR00191
YP_002730872.1	identified by match to protein family HMM PF00258
YP_002730873.1	identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM PF04851
YP_002730875.1	identified by match to protein family HMM PF01464; match to protein family HMM PF01476
YP_002730876.1	identified by match to protein family HMM PF04055
YP_002730877.1	identified by match to protein family HMM PF01881; match to protein family HMM TIGR01877
YP_002730878.1	identified by match to protein family HMM PF02441; match to protein family HMM PF04127; match to protein family HMM TIGR00521
YP_002730879.1	identified by match to protein family HMM PF02080
YP_002730880.1	identified by match to protein family HMM PF00999
YP_002730881.1	lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_002730882.1	identified by match to protein family HMM PF00520; match to protein family HMM PF02254; match to protein family HMM PF07885
YP_002730883.1	catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis
YP_002730884.1	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis
YP_002730885.1	identified by Glimmer3
YP_002730886.1	identified by match to protein family HMM PF01934
YP_002730887.1	identified by match to protein family HMM PF00005
YP_002730889.1	identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120
YP_002730890.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_002730891.1	identified by match to protein family HMM PF01513
YP_002730892.1	identified by match to protein family HMM PF02542; match to protein family HMM TIGR00151
YP_002730894.1	catalyzes branch migration in Holliday junction intermediates
YP_002730895.1	identified by match to protein family HMM PF02535
YP_002730896.1	identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254
YP_002730897.1	identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254
YP_002730898.1	identified by match to protein family HMM PF01841
YP_002730899.1	identified by match to protein family HMM PF01882
YP_002730900.1	identified by match to protein family HMM PF07726; match to protein family HMM PF07728
YP_002730901.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_002730902.1	identified by Glimmer3
YP_002730904.1	identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254
YP_002730905.1	identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141
YP_002730906.1	identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177
YP_002730907.1	identified by match to protein family HMM PF00289; match to protein family HMM PF02142; match to protein family HMM PF02222; match to protein family HMM PF02655; match to protein family HMM PF02786; match to protein family HMM PF08443
YP_002730908.1	identified by Glimmer3
YP_002730909.1	identified by match to protein family HMM PF02581
YP_002730910.1	identified by match to protein family HMM PF03966
YP_002730911.1	identified by match to protein family HMM PF00496
YP_002730912.1	identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002730915.1	identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778
YP_002730916.1	Catalyzes the reversible oxidation of malate to oxaloacetate
YP_002730917.1	Catalyzes the reversible hydration of fumaric acid to yield I-malic acid
YP_002730918.1	identified by match to protein family HMM PF05683; match to protein family HMM TIGR00723
YP_002730919.1	catalyzes the interconversion of succinyl-CoA and succinate
YP_002730920.1	identified by match to protein family HMM PF00549; match to protein family HMM PF02629; match to protein family HMM TIGR01019
YP_002730921.1	identified by match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR03710
YP_002730922.1	identified by match to protein family HMM PF02775; match to protein family HMM TIGR02177
YP_002730926.1	identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797
YP_002730927.1	identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525
YP_002730928.1	identified by match to protein family HMM PF00581
YP_002730929.1	identified by match to protein family HMM PF00805
YP_002730930.1	identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532
YP_002730931.1	identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532
YP_002730932.1	identified by Glimmer3
YP_002730933.1	identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532
YP_002730934.1	identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532
YP_002730935.1	identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532
YP_002730938.1	identified by Glimmer3
YP_002730939.1	identified by match to protein family HMM PF00072; match to protein family HMM PF00486
YP_002730940.1	identified by match to protein family HMM PF01128; match to protein family HMM TIGR00453
YP_002730941.1	identified by match to protein family HMM PF00300
YP_002730942.1	identified by match to protein family HMM PF00583
YP_002730943.1	identified by match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763
YP_002730944.1	identified by match to protein family HMM PF00011
YP_002730945.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
YP_002730946.1	identified by match to protein family HMM PF03938
YP_002730947.1	identified by match to protein family HMM PF01887
YP_002730948.1	identified by Glimmer3
YP_002730949.1	identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01553
YP_002730951.1	identified by match to protein family HMM PF02416; match to protein family HMM TIGR01411
YP_002730952.1	identified by match to protein family HMM PF00578
YP_002730953.1	identified by match to protein family HMM PF05728
YP_002730954.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_002730955.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif
YP_002730956.1	identified by match to protein family HMM PF00584; match to protein family HMM TIGR00964
YP_002730957.1	identified by match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922
YP_002730958.1	binds directly to 23S ribosomal RNA
YP_002730959.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_002730960.1	identified by match to protein family HMM PF00466
YP_002730961.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_002730962.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; betsubunit A is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_002730963.1	identified by match to protein family HMM PF00623; match to protein family HMM PF04983; match to protein family HMM PF04997; match to protein family HMM PF04998; match to protein family HMM PF05000; match to protein family HMM TIGR02386
YP_002730964.1	identified by match to protein family HMM PF00164; match to protein family HMM TIGR00981
YP_002730965.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_002730966.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_002730967.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_002730968.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_002730969.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_002730970.1	identified by match to protein family HMM PF00573
YP_002730971.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_002730972.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_002730973.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_002730974.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_002730975.1	identified by match to protein family HMM PF00189; match to protein family HMM PF00417; match to protein family HMM PF07650; match to protein family HMM TIGR01009
YP_002730976.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_002730977.1	one of the stabilizing components for the large ribosomal subunit
YP_002730978.1	identified by match to protein family HMM PF00366; match to protein family HMM TIGR03635
YP_002730979.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_002730980.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_002730981.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_002730982.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif
YP_002730983.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_002730984.1	identified by match to protein family HMM PF00347; match to protein family HMM TIGR03654
YP_002730985.1	identified by match to protein family HMM PF00861; match to protein family HMM TIGR00060
YP_002730986.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_002730987.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
YP_002730988.1	late assembly protein
YP_002730989.1	identified by match to protein family HMM PF00344; match to protein family HMM TIGR00967
YP_002730990.1	identified by match to protein family HMM PF00406; match to protein family HMM TIGR01351
YP_002730991.1	identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500
YP_002730992.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_002730993.1	identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022
YP_002730994.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_002730995.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_002730996.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_002730997.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alphsubunit A is the first step in the sequential assembly of subunits to form the holoenzyme
YP_002730998.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_002730999.1	identified by match to protein family HMM PF02325
YP_002731000.1	identified by Glimmer3
YP_002731001.1	identified by Glimmer3
YP_002731002.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_002731003.1	identified by match to protein family HMM PF00155
YP_002731004.1	identified by Glimmer3
YP_002731005.1	Involved in the metabolism of aromatic amino acids
YP_002731007.1	identified by Glimmer3
YP_002731008.1	identified by match to protein family HMM PF00563; match to protein family HMM PF00672; match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002731009.1	identified by match to protein family HMM PF09084
YP_002731011.1	identified by match to protein family HMM PF02237; match to protein family HMM PF03099; match to protein family HMM PF08279; match to protein family HMM TIGR00121
YP_002731012.1	identified by match to protein family HMM PF00591; match to protein family HMM PF02885
YP_002731013.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_002731015.1	identified by Glimmer3
YP_002731016.1	identified by Glimmer3
YP_002731017.1	identified by match to protein family HMM PF07883
YP_002731018.1	identified by Glimmer3
YP_002731019.1	identified by match to protein family HMM PF03548
YP_002731020.1	identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068
YP_002731021.1	identified by match to protein family HMM PF01171; match to protein family HMM TIGR00269
YP_002731022.1	identified by match to protein family HMM PF02597
YP_002731023.1	identified by match to protein family HMM PF05013
YP_002731024.1	identified by match to protein family HMM PF01019
YP_002731025.1	identified by match to protein family HMM PF01071; match to protein family HMM PF02655; match to protein family HMM PF07478
YP_002731026.1	identified by match to protein family HMM PF00293
YP_002731028.1	identified by match to protein family HMM PF00027; match to protein family HMM PF00325
YP_002731029.1	identified by match to protein family HMM PF00034
YP_002731030.1	identified by match to protein family HMM PF00116
YP_002731033.1	identified by match to protein family HMM PF05048
YP_002731034.1	identified by match to protein family HMM PF00005
YP_002731036.1	identified by match to protein family HMM PF00034
YP_002731037.1	identified by match to protein family HMM PF04314
YP_002731038.1	identified by match to protein family HMM PF00578; match to protein family HMM PF02630
YP_002731039.1	identified by match to protein family HMM PF00593; match to protein family HMM PF07715
YP_002731040.1	identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002731041.1	identified by match to protein family HMM PF02606; match to protein family HMM TIGR00682
YP_002731042.1	identified by match to protein family HMM PF02616
YP_002731043.1	identified by match to protein family HMM PF00571; match to protein family HMM PF00654
YP_002731044.1	identified by match to protein family HMM PF02386
YP_002731045.1	identified by match to protein family HMM PF02080; match to protein family HMM PF02254
YP_002731046.1	identified by match to protein family HMM PF04055
YP_002731047.1	identified by match to protein family HMM PF04966
YP_002731048.1	identified by Glimmer3
YP_002731052.1	identified by match to protein family HMM PF02424
YP_002731053.1	identified by match to protein family HMM PF07396
YP_002731055.1	identified by match to protein family HMM PF02153; match to protein family HMM PF03446
YP_002731056.1	identified by match to protein family HMM PF00582
YP_002731057.1	identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297
YP_002731058.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
YP_002731059.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_002731060.1	identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251
YP_002731061.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
YP_002731062.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_002731063.1	identified by match to protein family HMM PF01250; match to protein family HMM TIGR00166
YP_002731064.1	identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621
YP_002731065.1	identified by match to protein family HMM PF01084; match to protein family HMM TIGR00165
YP_002731066.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_002731067.1	identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665
YP_002731068.1	identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056
YP_002731069.1	identified by Glimmer3
YP_002731070.1	catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis
YP_002731074.1	identified by match to protein family HMM PF00795; match to protein family HMM TIGR00546
YP_002731075.1	identified by Glimmer3
YP_002731076.1	identified by Glimmer3
YP_002731077.1	identified by match to protein family HMM PF01863
YP_002731078.1	identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348
YP_002731080.1	identified by match to protein family HMM PF01420
YP_002731081.1	identified by match to protein family HMM TIGR02391
YP_002731082.1	identified by match to protein family HMM PF01170; match to protein family HMM PF02384; match to protein family HMM TIGR00497
YP_002731084.1	identified by match to protein family HMM PF05621
YP_002731085.1	identified by match to protein family HMM PF00665; match to protein family HMM PF09299
YP_002731088.1	identified by match to protein family HMM PF01637
YP_002731089.1	identified by match to protein family HMM PF04055
YP_002731091.1	identified by Glimmer3
YP_002731092.1	identified by match to protein family HMM PF05697; match to protein family HMM PF05698; match to protein family HMM TIGR00115
YP_002731093.1	identified by match to protein family HMM PF00574; match to protein family HMM TIGR00493
YP_002731094.1	binds and unfolds substrates as part of the ClpXP protease
YP_002731095.1	identified by match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231; match to protein family HMM TIGR03598
YP_002731096.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_002731097.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_002731098.1	identified by match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00538
YP_002731099.1	identified by Glimmer3
YP_002731101.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
YP_002731102.1	identified by match to protein family HMM PF01881; match to protein family HMM TIGR01877
YP_002731103.1	identified by match to protein family HMM TIGR01908
YP_002731104.1	identified by match to protein family HMM TIGR01875; match to protein family HMM TIGR02585
YP_002731105.1	identified by match to protein family HMM TIGR01552
YP_002731106.1	identified by match to protein family HMM TIGR01895; match to protein family HMM TIGR02593
YP_002731107.1	identified by match to protein family HMM PF00271; match to protein family HMM TIGR01587; match to protein family HMM TIGR01596
YP_002731109.1	identified by match to protein family HMM PF01930; match to protein family HMM TIGR00372
YP_002731111.1	identified by match to protein family HMM PF04411
YP_002731112.1	identified by match to protein family HMM PF01867; match to protein family HMM TIGR00287; match to protein family HMM TIGR03641
YP_002731113.1	identified by match to protein family HMM PF02647; match to protein family HMM TIGR01573
YP_002731114.1	identified by Glimmer3
YP_002731115.1	identified by Glimmer3
YP_002731116.1	identified by Glimmer3
YP_002731118.1	identified by match to protein family HMM PF08241
YP_002731119.1	identified by match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255
YP_002731120.1	identified by match to protein family HMM PF01988; match to protein family HMM PF02915
YP_002731121.1	identified by match to protein family HMM PF04413
YP_002731122.1	identified by match to protein family HMM PF03649; match to protein family HMM TIGR00245
YP_002731123.1	identified by match to protein family HMM PF02684; match to protein family HMM TIGR00215
YP_002731124.1	identified by match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR00433
YP_002731125.1	identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993
YP_002731129.1	identified by match to protein family HMM PF00534
YP_002731131.1	identified by Glimmer3
YP_002731133.1	similar to protein found in mitochondrial proteome protein 30; identified by match to protein family HMM PF00753
YP_002731134.1	identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444
YP_002731135.1	identified by match to protein family HMM PF00156; match to protein family HMM TIGR01091
YP_002731136.1	identified by match to protein family HMM PF01810
YP_002731137.1	identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993
YP_002731138.1	identified by Glimmer3
YP_002731141.1	identified by match to protein family HMM TIGR01409
YP_002731143.1	identified by Glimmer3
YP_002731144.1	identified by Glimmer3
YP_002731145.1	identified by Glimmer3
YP_002731146.1	identified by Glimmer3
YP_002731147.1	identified by Glimmer3
YP_002731148.1	identified by Glimmer3
YP_002731149.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
YP_002731150.1	identified by match to protein family HMM PF00216
YP_002731151.1	identified by match to protein family HMM PF00132
YP_002731152.1	identified by Glimmer3
YP_002731153.1	identified by match to protein family HMM PF01242
YP_002731154.1	identified by match to protein family HMM PF00175
YP_002731155.1	identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01812; match to protein family HMM TIGR01816
YP_002731156.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_002731157.1	identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048
YP_002731158.1	identified by match to protein family HMM PF03775; match to protein family HMM TIGR01222
YP_002731159.1	identified by match to protein family HMM PF01656; match to protein family HMM TIGR01968
YP_002731160.1	identified by match to protein family HMM PF03776; match to protein family HMM TIGR01215
YP_002731161.1	identified by match to protein family HMM PF01634; match to protein family HMM TIGR00070
YP_002731162.1	identified by match to protein family HMM PF00132; match to protein family HMM PF00483; match to protein family HMM TIGR01173
YP_002731163.1	identified by match to protein family HMM PF00639; match to protein family HMM PF09312
YP_002731164.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_002731165.1	identified by Glimmer3
YP_002731166.1	identified by match to protein family HMM PF00106
YP_002731167.1	identified by Glimmer3
YP_002731168.1	identified by match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02479; match to protein family HMM TIGR02937
YP_002731169.1	identified by match to protein family HMM PF01656
YP_002731170.1	identified by match to protein family HMM PF00448
YP_002731171.1	identified by match to protein family HMM PF01648; match to protein family HMM TIGR00516; match to protein family HMM TIGR00556
YP_002731172.1	identified by match to protein family HMM PF01202
YP_002731173.1	identified by Glimmer3
YP_002731174.1	identified by match to protein family HMM PF02594
YP_002731176.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
YP_002731178.1	identified by match to protein family HMM PF02581; match to protein family HMM TIGR00693
YP_002731179.1	identified by match to protein family HMM PF00507
YP_002731180.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_002731181.1	identified by match to protein family HMM PF00329; match to protein family HMM PF00346; match to protein family HMM TIGR01961; match to protein family HMM TIGR01962
YP_002731182.1	identified by match to protein family HMM PF00146
YP_002731183.1	identified by match to protein family HMM PF00037
YP_002731184.1	identified by match to protein family HMM PF00499
YP_002731185.1	identified by match to protein family HMM PF00420
YP_002731186.1	identified by match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974
YP_002731187.1	identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972
YP_002731188.1	identified by match to protein family HMM PF00361; match to protein family HMM TIGR01770
YP_002731189.1	Essential for recycling GMP and indirectly, cGMP
YP_002731190.1	identified by match to protein family HMM PF04892
YP_002731191.1	identified by match to protein family HMM TIGR00690
YP_002731192.1	identified by match to protein family HMM PF00512; match to protein family HMM PF02518
YP_002731193.1	identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728
YP_002731194.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1
YP_002731195.1	identified by match to protein family HMM PF03747
YP_002731196.1	identified by match to protein family HMM PF01423; match to protein family HMM TIGR02383
YP_002731197.1	identified by match to protein family HMM PF00034; match to protein family HMM PF03150
YP_002731198.1	identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150
YP_002731200.1	identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002
YP_002731201.1	identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959
YP_002731202.1	identified by match to protein family HMM PF01103; match to protein family HMM PF07244; match to protein family HMM PF08479
YP_002731203.1	identified by match to protein family HMM PF07277
YP_002731204.1	identified by match to protein family HMM PF05594; match to protein family HMM PF05860; match to protein family HMM TIGR01901
YP_002731205.1	identified by match to protein family HMM PF00675; match to protein family HMM PF05193
YP_002731206.1	identified by match to protein family HMM PF01564; match to protein family HMM TIGR00417
YP_002731207.1	identified by match to protein family HMM PF01861
YP_002731209.1	catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate
YP_002731210.1	identified by Glimmer3
YP_002731211.1	identified by match to protein family HMM PF00194
YP_002731212.1	identified by match to protein family HMM PF01578
YP_002731217.1	identified by match to protein family HMM PF01436; match to protein family HMM PF08450
YP_002731218.1	identified by Glimmer3
YP_002731219.1	identified by match to protein family HMM PF00639
YP_002731220.1	identified by match to protein family HMM PF01436
YP_002731222.1	identified by match to protein family HMM PF01436
YP_002731224.1	identified by match to protein family HMM PF09699; match to protein family HMM TIGR01905
YP_002731225.1	identified by match to protein family HMM PF03264
YP_002731226.1	identified by match to protein family HMM PF09699; match to protein family HMM TIGR01905
YP_002731227.1	identified by match to protein family HMM PF09699; match to protein family HMM TIGR01905
YP_002731228.1	identified by match to protein family HMM PF09699; match to protein family HMM TIGR01905
YP_002731229.1	identified by match to protein family HMM PF07992
YP_002731230.1	identified by Glimmer3
YP_002731231.1	identified by match to protein family HMM PF02617
YP_002731232.1	identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR00482
YP_002731233.1	identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037
YP_002731235.1	identified by match to protein family HMM PF01040; match to protein family HMM TIGR01475
YP_002731236.1	identified by match to protein family HMM PF07977; match to protein family HMM TIGR01750
YP_002731237.1	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase
YP_002731238.1	identified by match to protein family HMM PF00160
YP_002731239.1	identified by match to protein family HMM PF02538
YP_002731240.1	identified by match to protein family HMM PF01968; match to protein family HMM PF05378
YP_002731242.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_002731243.1	identified by match to protein family HMM PF01209; match to protein family HMM PF02390; match to protein family HMM PF08241; match to protein family HMM PF08242
YP_002731244.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-aribino-heptulonate 7-phosphate
YP_002731245.1	identified by match to protein family HMM PF02470
YP_002731246.1	identified by match to protein family HMM PF00027; match to protein family HMM PF00325
YP_002731247.1	identified by match to protein family HMM PF02321
YP_002731248.1	identified by match to protein family HMM TIGR01730
YP_002731249.1	identified by match to protein family HMM PF00873
YP_002731250.1	identified by match to protein family HMM PF01210; match to protein family HMM PF03721; match to protein family HMM PF03807; match to protein family HMM PF07479
YP_002731251.1	identified by Glimmer3
YP_002731252.1	identified by match to protein family HMM PF02687
YP_002731253.1	identified by match to protein family HMM PF02687
YP_002731254.1	identified by match to protein family HMM PF00015; match to protein family HMM PF00672
YP_002731255.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_002731257.1	identified by match to protein family HMM PF01071; match to protein family HMM PF02222; match to protein family HMM TIGR01142
YP_002731258.1	identified by Glimmer3
YP_002731259.1	identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728
YP_002731262.1	identified by match to protein family HMM PF00072; match to protein family HMM PF01966
YP_002731265.1	identified by match to protein family HMM PF00072
YP_002731266.1	identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518
YP_002731267.1	identified by Glimmer3
YP_002731268.1	identified by match to protein family HMM PF01808; match to protein family HMM PF02142; match to protein family HMM TIGR00355
YP_002731269.1	identified by match to protein family HMM PF01743
YP_002731271.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_002731272.1	identified by match to protein family HMM PF00482
YP_002731273.1	identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420
YP_002731274.1	identified by match to protein family HMM PF00437; match to protein family HMM PF05157
YP_002731275.1	identified by match to protein family HMM PF00289; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM PF08443; match to protein family HMM TIGR00514
YP_002731276.1	identified by match to protein family HMM PF00753
YP_002731277.1	identified by match to protein family HMM PF01261; match to protein family HMM TIGR00587
YP_002731278.1	identified by match to protein family HMM PF00348
YP_002731279.1	Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5)
YP_002731280.1	identified by match to protein family HMM PF01464; match to protein family HMM PF01476
YP_002731281.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_002731282.1	identified by Glimmer3
YP_002731283.1	identified by Glimmer3
YP_002731284.1	identified by match to protein family HMM PF00696; match to protein family HMM TIGR00761
YP_002731285.1	identified by match to protein family HMM TIGR00376
YP_002731287.1	identified by Glimmer3
YP_002731288.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
YP_002731289.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_002731290.1	identified by match to protein family HMM PF01258
YP_002731291.1	identified by Glimmer3
YP_002731293.1	identified by match to protein family HMM PF00083; match to protein family HMM PF07690
YP_002731294.1	identified by Glimmer3
YP_002731295.1	identified by match to protein family HMM PF00285; match to protein family HMM TIGR01800
YP_002731296.1	identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525
YP_002731297.1	identified by match to protein family HMM PF02621
YP_002731298.1	identified by match to protein family HMM PF01557
YP_002731299.1	identified by match to protein family HMM PF05430
YP_002731300.1	identified by Glimmer3
YP_002731301.1	identified by match to protein family HMM PF00136
YP_002731302.1	identified by Glimmer3
YP_002731305.1	identified by match to protein family HMM PF00717; match to protein family HMM PF01726; match to protein family HMM TIGR00498
YP_002731306.1	identified by match to protein family HMM PF00712; match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663
YP_002731307.1	identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF01751; match to protein family HMM PF02518; match to protein family HMM TIGR01059
YP_002731308.1	identified by match to protein family HMM PF00034
YP_002731309.1	identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254
YP_002731310.1	identified by match to protein family HMM TIGR01730
YP_002731311.1	identified by match to protein family HMM PF02321
YP_002731312.1	identified by match to protein family HMM PF00425
YP_002731313.1	identified by Glimmer3
YP_002731314.1	identified by Glimmer3
YP_002731315.1	identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229
YP_002731316.1	identified by match to protein family HMM PF00072; match to protein family HMM PF00158
YP_002731317.1	identified by match to protein family HMM PF00488; match to protein family HMM PF01713; match to protein family HMM TIGR01069
YP_002731318.1	identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382
YP_002731319.1	identified by match to protein family HMM PF00480
YP_002731320.1	identified by Glimmer3
YP_002731321.1	identified by match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR00966
YP_002731322.1	identified by match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR01129
YP_002731323.1	identified by Glimmer3
YP_002731324.1	identified by match to protein family HMM PF00342
YP_002731325.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002731326.1	identified by match to protein family HMM PF00515; match to protein family HMM PF07719
YP_002731327.1	identified by match to protein family HMM PF04357
YP_002731328.1	identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566
YP_002731329.1	identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01443; match to protein family HMM TIGR01445
YP_002731330.1	identified by Glimmer3
YP_002731331.1	identified by Glimmer3
YP_002731333.1	identified by match to protein family HMM PF00994; match to protein family HMM PF01967; match to protein family HMM TIGR00177; match to protein family HMM TIGR00581
YP_002731334.1	identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203
YP_002731335.1	identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575
YP_002731336.1	identified by match to protein family HMM PF00925; match to protein family HMM PF00926; match to protein family HMM TIGR00505; match to protein family HMM TIGR00506
YP_002731337.1	identified by Glimmer3
YP_002731339.1	identified by match to protein family HMM PF01547; match to protein family HMM TIGR00975
YP_002731340.1	identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138
YP_002731341.1	identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974
YP_002731342.1	identified by match to protein family HMM PF00005; match to protein family HMM TIGR00972
YP_002731343.1	identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135
YP_002731344.1	identified by match to protein family HMM PF00512; match to protein family HMM PF02518
YP_002731345.1	catalyzes the hydrolysis of mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate
YP_002731346.1	identified by match to protein family HMM PF05161
YP_002731347.1	identified by match to protein family HMM PF00535
YP_002731349.1	identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01138
YP_002731350.1	identified by match to protein family HMM PF01330; match to protein family HMM PF07499; match to protein family HMM TIGR00084
YP_002731351.1	identified by match to protein family HMM PF00171; match to protein family HMM PF05893
YP_002731352.1	identified by match to protein family HMM PF00543
YP_002731353.1	identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653
YP_002731354.1	identified by match to protein family HMM PF07238
YP_002731356.1	identified by match to protein family HMM PF00515; match to protein family HMM PF07719
YP_002731357.1	identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730
YP_002731359.1	identified by match to protein family HMM PF01121; match to protein family HMM TIGR00152
YP_002731360.1	identified by Glimmer3
YP_002731362.1	identified by match to protein family HMM PF07690
YP_002731363.1	identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093
YP_002731364.1	identified by match to protein family HMM PF00216
YP_002731366.1	identified by match to protein family HMM PF00005; match to protein family HMM PF02463
YP_002731367.1	identified by match to protein family HMM PF01910; match to protein family HMM TIGR00106
YP_002731368.1	identified by match to protein family HMM PF01938; match to protein family HMM PF05958; match to protein family HMM TIGR00479
YP_002731369.1	identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727
YP_002731370.1	identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471
YP_002731371.1	identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471
YP_002731372.1	identified by match to protein family HMM PF07690
YP_002731373.1	identified by match to protein family HMM PF02527; match to protein family HMM TIGR00138
YP_002731374.1	Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine = 7-oxoG) from DNA. Also nicks DNA at apurinic/apyrimidinic sites
YP_002731375.1	identified by Glimmer3
YP_002731376.1	identified by match to protein family HMM PF02677
YP_002731377.1	identified by match to protein family HMM PF01402
YP_002731378.1	identified by match to protein family HMM PF01544; match to protein family HMM TIGR00383
YP_002731379.1	identified by Glimmer3
YP_002731380.1	identified by match to protein family HMM PF06429; match to protein family HMM TIGR02492
YP_002731381.1	identified by match to protein family HMM TIGR02550
YP_002731382.1	identified by Glimmer3
YP_002731383.1	identified by match to protein family HMM PF02561; match to protein family HMM TIGR00208
YP_002731384.1	identified by match to protein family HMM PF02465; match to protein family HMM PF07195
YP_002731385.1	identified by match to protein family HMM PF03646
YP_002731386.1	identified by match to protein family HMM PF00669; match to protein family HMM PF00700
YP_002731387.1	identified by match to protein family HMM PF01973
YP_002731388.1	identified by match to protein family HMM PF02348
YP_002731389.1	identified by match to protein family HMM PF00483; match to protein family HMM PF00571
YP_002731390.1	identified by match to protein family HMM PF02350; match to protein family HMM TIGR03568
YP_002731391.1	identified by match to protein family HMM PF01850
YP_002731392.1	identified by Glimmer3
YP_002731393.1	identified by match to protein family HMM PF03102; match to protein family HMM PF08666; match to protein family HMM TIGR03569
YP_002731394.1	identified by match to protein family HMM PF00132; match to protein family HMM TIGR03570
YP_002731395.1	identified by match to protein family HMM PF00266; match to protein family HMM PF01041; match to protein family HMM PF01212
YP_002731396.1	identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993
YP_002731397.1	identified by match to protein family HMM PF01925
YP_002731398.1	identified by match to protein family HMM PF02366
YP_002731399.1	identified by match to protein family HMM PF01063
YP_002731400.1	identified by match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM TIGR00656; match to protein family HMM TIGR00657
YP_002731401.1	identified by match to protein family HMM PF00289; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM PF08443; match to protein family HMM TIGR00514
YP_002731402.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_002731403.1	identified by match to protein family HMM PF04977
YP_002731404.1	identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; match to protein family HMM TIGR01662
YP_002731405.1	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate
YP_002731406.1	identified by Glimmer3
YP_002731407.1	identified by match to protein family HMM PF00037; match to protein family HMM PF00111
YP_002731408.1	identified by match to protein family HMM PF02620
YP_002731409.1	identified by match to protein family HMM PF00692; match to protein family HMM TIGR02274
YP_002731411.1	identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004
YP_002731412.1	identified by match to protein family HMM PF00977; match to protein family HMM TIGR00007
YP_002731413.1	identified by match to protein family HMM PF03109
YP_002731414.1	identified by match to protein family HMM PF02511
YP_002731415.1	identified by match to protein family HMM PF00563; match to protein family HMM PF08668
YP_002731416.1	identified by match to protein family HMM PF01661
YP_002731417.1	identified by Glimmer3
YP_002731418.1	identified by match to protein family HMM PF00675; match to protein family HMM PF05193
YP_002731419.1	identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002731423.1	identified by match to protein family HMM PF02321
YP_002731424.1	identified by match to protein family HMM PF01475
YP_002731426.1	identified by match to protein family HMM PF00902; match to protein family HMM TIGR00945
YP_002731427.1	identified by match to protein family HMM PF02416; match to protein family HMM TIGR01410
YP_002731428.1	identified by match to protein family HMM PF01103; match to protein family HMM PF07244
YP_002731429.1	identified by match to protein family HMM PF02366
YP_002731430.1	identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097
YP_002731432.1	identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026
YP_002731433.1	identified by match to protein family HMM PF01594
YP_002731434.1	Decarboxylation of S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine
YP_002731435.1	identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607; match to protein family HMM PF02965; match to protein family HMM TIGR02082
YP_002731436.1	identified by match to protein family HMM PF04463
YP_002731437.1	identified by match to protein family HMM PF00762; match to protein family HMM TIGR00109
YP_002731438.1	identified by Glimmer3
YP_002731439.1	identified by match to protein family HMM PF00140; match to protein family HMM PF03979; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02393; match to protein family HMM TIGR02937
YP_002731440.1	identified by match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM PF08275; match to protein family HMM TIGR01391
YP_002731441.1	identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496
YP_002731442.1	identified by match to protein family HMM PF02457; match to protein family HMM TIGR00159
YP_002731444.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
YP_002731445.1	identified by match to protein family HMM PF00072; match to protein family HMM PF00486
YP_002731446.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_002731447.1	identified by match to protein family HMM PF00027; match to protein family HMM PF00325
YP_002731448.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
YP_002731449.1	identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057
YP_002731450.1	identified by match to protein family HMM PF00390; match to protein family HMM PF03949
YP_002731451.1	identified by match to protein family HMM PF02675; match to protein family HMM TIGR03330
YP_002731452.1	identified by Glimmer3
YP_002731453.1	catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine
YP_002731454.1	identified by match to protein family HMM PF01475
YP_002731456.1	identified by match to protein family HMM PF00593; match to protein family HMM PF07715
YP_002731459.1	identified by match to protein family HMM PF02823; match to protein family HMM TIGR01216
YP_002731460.1	identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM TIGR01039
YP_002731461.1	identified by match to protein family HMM PF00231
YP_002731462.1	identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM PF09378; match to protein family HMM TIGR00962
YP_002731463.1	identified by match to protein family HMM PF00430
YP_002731464.1	identified by match to protein family HMM PF00137; match to protein family HMM TIGR01260
YP_002731465.1	identified by match to protein family HMM PF00119; match to protein family HMM TIGR01131
YP_002731466.1	identified by Glimmer3
YP_002731467.1	identified by match to protein family HMM PF00999
YP_002731468.1	identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232
YP_002731469.1	identified by match to protein family HMM PF03588; match to protein family HMM TIGR00667
YP_002731470.1	identified by match to protein family HMM PF01142
YP_002731471.1	identified by match to protein family HMM PF04368
YP_002731472.1	identified by match to protein family HMM PF01087; match to protein family HMM TIGR00209
YP_002731473.1	identified by match to protein family HMM PF08761
YP_002731474.1	identified by match to protein family HMM PF01972
YP_002731475.1	identified by Glimmer3
YP_002731476.1	identified by match to protein family HMM PF00763; match to protein family HMM PF02882
YP_002731477.1	identified by Glimmer3
YP_002731478.1	identified by match to protein family HMM PF00549
YP_002731480.1	identified by match to protein family HMM PF03971; match to protein family HMM TIGR00178
YP_002731481.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis
YP_002731483.1	identified by match to protein family HMM PF03652; match to protein family HMM TIGR00250
YP_002731484.1	identified by match to protein family HMM PF02618; match to protein family HMM TIGR00247
YP_002731485.1	identified by match to protein family HMM PF03739
YP_002731486.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
YP_002731488.1	identified by match to protein family HMM PF03968; match to protein family HMM TIGR03002
YP_002731489.1	identified by match to protein family HMM PF06835
YP_002731490.1	identified by match to protein family HMM PF00745; match to protein family HMM PF01488; match to protein family HMM PF05201; match to protein family HMM TIGR01035
YP_002731491.1	identified by match to protein family HMM PF00209
YP_002731492.1	identified by Glimmer3
YP_002731493.1	identified by match to protein family HMM PF00334
YP_002731495.1	identified by match to protein family HMM PF00672
YP_002731496.1	identified by Glimmer3
YP_002731497.1	identified by match to protein family HMM PF03259
YP_002731499.1	identified by match to protein family HMM PF00071; match to protein family HMM PF03029; match to protein family HMM PF08477; match to protein family HMM TIGR00231
YP_002731500.1	identified by match to protein family HMM PF01979; match to protein family HMM PF07969
YP_002731501.1	identified by match to protein family HMM PF02687
YP_002731502.1	identified by match to protein family HMM PF00005
YP_002731503.1	identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728
YP_002731504.1	identified by match to protein family HMM PF01103; match to protein family HMM PF07244; match to protein family HMM TIGR03303
YP_002731505.1	identified by match to protein family HMM PF03938
YP_002731506.1	identified by match to protein family HMM PF00132; match to protein family HMM PF04613; match to protein family HMM TIGR01853
YP_002731507.1	identified by match to protein family HMM PF02683
YP_002731508.1	identified by match to protein family HMM PF00578; match to protein family HMM PF08534
YP_002731509.1	identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384
YP_002731510.1	identified by match to protein family HMM PF01594; similar to protein aq_740
YP_002731511.1	identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993
YP_002731512.1	identified by match to protein family HMM PF00070; match to protein family HMM PF07992
YP_002731513.1	catalyzes the reversible formation of fructose 1,6-bisphosphate from glycerone phosphate and D-glyceraldehyde 3-phosphate
YP_002731514.1	identified by Glimmer3
YP_002731516.1	identified by match to protein family HMM PF01230
YP_002731517.1	identified by match to protein family HMM TIGR00595
YP_002731518.1	heat shock protein involved in degradation of misfolded proteins
YP_002731519.1	identified by match to protein family HMM PF00877
YP_002731520.1	identified by match to protein family HMM PF03602
YP_002731521.1	identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01510
YP_002731522.1	identified by Glimmer3
YP_002731523.1	identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128
YP_002731524.1	identified by match to protein family HMM PF00004; match to protein family HMM PF00308; match to protein family HMM PF05491; match to protein family HMM PF05496; match to protein family HMM PF07728; match to protein family HMM TIGR00635
YP_002731525.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
YP_002731526.1	identified by match to protein family HMM PF00581
YP_002731527.1	identified by match to protein family HMM PF01565; match to protein family HMM PF02913
YP_002731528.1	identified by match to protein family HMM PF01881; match to protein family HMM TIGR01877
YP_002731530.1	identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002731531.1	identified by match to protein family HMM PF04389
YP_002731532.1	identified by match to protein family HMM PF01814; match to protein family HMM TIGR02481
YP_002731533.1	identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242
YP_002731534.1	identified by Glimmer3
YP_002731535.1	identified by match to protein family HMM TIGR01760
YP_002731536.1	identified by Glimmer3
YP_002731538.1	identified by Glimmer3
YP_002731539.1	identified by Glimmer3
YP_002731540.1	identified by Glimmer3
YP_002731541.1	identified by Glimmer3
YP_002731542.1	identified by Glimmer3
YP_002731543.1	identified by Glimmer3
YP_002731545.1	identified by Glimmer3
YP_002731546.1	identified by Glimmer3
YP_002731547.1	identified by Glimmer3
YP_002731548.1	identified by Glimmer3
YP_002731549.1	identified by Glimmer3
YP_002731550.1	identified by match to protein family HMM PF09643
YP_002731552.1	identified by match to protein family HMM PF00216
YP_002731553.1	identified by Glimmer3
YP_002731554.1	identified by Glimmer3
YP_002731555.1	identified by Glimmer3
YP_002731556.1	identified by Glimmer3
YP_002731557.1	identified by match to protein family HMM PF00665; match to protein family HMM PF02796
YP_002731558.1	identified by Glimmer3
YP_002731559.1	identified by Glimmer3
YP_002731560.1	identified by Glimmer3
YP_002731561.1	identified by match to protein family HMM PF01381
YP_002731562.1	identified by Glimmer3
YP_002731563.1	identified by Glimmer3
YP_002731564.1	identified by Glimmer3
YP_002731565.1	identified by Glimmer3
YP_002731566.1	identified by Glimmer3
YP_002731567.1	identified by Glimmer3
YP_002731568.1	identified by Glimmer3
YP_002731569.1	identified by Glimmer3
YP_002731570.1	identified by Glimmer3
YP_002731571.1	identified by Glimmer3
YP_002731572.1	identified by match to protein family HMM PF04865
YP_002731573.1	identified by Glimmer3
YP_002731574.1	identified by match to protein family HMM PF01870
YP_002731575.1	identified by Glimmer3
YP_002731576.1	identified by Glimmer3
YP_002731577.1	identified by Glimmer3
YP_002731578.1	identified by match to protein family HMM PF03237; match to protein family HMM TIGR01630
YP_002731580.1	identified by Glimmer3
YP_002731581.1	identified by Glimmer3
YP_002731582.1	identified by Glimmer3
YP_002731584.1	identified by Glimmer3
YP_002731585.1	identified by Glimmer3
YP_002731586.1	identified by Glimmer3
YP_002731588.1	identified by Glimmer3
YP_002731589.1	identified by Glimmer3
YP_002731590.1	identified by Glimmer3
YP_002731591.1	identified by match to protein family HMM TIGR00441
YP_002731592.1	identified by match to protein family HMM PF00158; match to protein family HMM PF02954
YP_002731593.1	identified by match to protein family HMM PF00515
YP_002731594.1	identified by match to protein family HMM PF07690
YP_002731595.1	identified by match to protein family HMM PF01935; match to protein family HMM PF09378
YP_002731596.1	identified by match to protein family HMM PF00156
YP_002731598.1	identified by Glimmer3
YP_002731600.1	identified by match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00539
YP_002731602.1	identified by match to protein family HMM PF00533; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575
YP_002731603.1	catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate
YP_002731604.1	identified by match to protein family HMM PF06325; match to protein family HMM PF08241
YP_002731605.1	identified by Glimmer3
YP_002731606.1	identified by match to protein family HMM PF00376
YP_002731607.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_002731608.1	identified by match to protein family HMM PF00815; match to protein family HMM TIGR00069
YP_002731609.1	identified by match to protein family HMM PF02578; similar to protein aq_167
YP_002731610.1	identified by match to protein family HMM TIGR00515
YP_002731611.1	identified by match to protein family HMM PF03205; match to protein family HMM TIGR00176
YP_002731612.1	identified by match to protein family HMM PF00708
YP_002731613.1	identified by match to protein family HMM PF01476; match to protein family HMM PF01551
YP_002731614.1	identified by match to protein family HMM PF00155
YP_002731615.1	identified by match to protein family HMM PF00005
YP_002731616.1	catalyzes the formation of pimeloyl-CoA from pimelate and coenzyme A
YP_002731617.1	identified by Glimmer3
YP_002731619.1	identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242
YP_002731620.1	identified by Glimmer3
YP_002731622.1	identified by match to protein family HMM PF04255
YP_002731623.1	identified by Glimmer3
YP_002731625.1	identified by match to protein family HMM PF01850
YP_002731626.1	identified by match to protein family HMM PF03683
YP_002731628.1	identified by Glimmer3
YP_002731629.1	identified by match to protein family HMM PF01850
YP_002731631.1	identified by match to protein family HMM PF01850
YP_002731632.1	identified by Glimmer3
YP_002731633.1	identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002731634.1	converts methylthioribulose-1-phosphate into 2,3-diketo-5-methylthiopentyl-1-phosphate; involved in methionine salvage
YP_002731635.1	identified by match to protein family HMM PF03079; match to protein family HMM PF07883
YP_002731636.1	identified by match to protein family HMM PF00106
YP_002731637.1	identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683
YP_002731638.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_002731639.1	identified by match to protein family HMM PF01814; match to protein family HMM TIGR02481
YP_002731640.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
YP_002731641.1	identified by match to protein family HMM PF01936
YP_002731642.1	identified by match to protein family HMM PF00850
YP_002731643.1	identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01085
YP_002731644.1	identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254
YP_002731645.1	identified by Glimmer3
YP_002731647.1	identified by Glimmer3
YP_002731648.1	identified by Glimmer3
YP_002731650.1	identified by match to protein family HMM PF02872; match to protein family HMM TIGR01409
YP_002731652.1	identified by match to protein family HMM PF08770
YP_002731653.1	identified by match to protein family HMM TIGR01409
YP_002731656.1	identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728
YP_002731657.1	identified by match to protein family HMM PF08754
YP_002731659.1	identified by match to protein family HMM PF01464
YP_002731660.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_002731661.1	identified by match to protein family HMM PF02080; match to protein family HMM PF02254
YP_002731663.1	catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA
YP_002731664.1	identified by match to protein family HMM PF07992
YP_002731665.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
YP_002731666.1	identified by match to protein family HMM PF02797; match to protein family HMM PF08541
YP_002731667.1	identified by match to protein family HMM PF01880
YP_002731669.1	identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326
YP_002731670.1	identified by match to protein family HMM PF02811
YP_002731671.1	identified by Glimmer3
YP_002731672.1	identified by match to protein family HMM PF00749; match to protein family HMM TIGR00464
YP_002731673.1	identified by match to protein family HMM PF00782
YP_002731674.1	identified by Glimmer3
YP_002731676.1	identified by match to protein family HMM PF00005
YP_002731677.1	identified by match to protein family HMM PF00528; match to protein family HMM TIGR02141
YP_002731679.1	identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256
YP_002731680.1	identified by match to protein family HMM PF00126; match to protein family HMM PF03459; match to protein family HMM TIGR00637; match to protein family HMM TIGR00638
YP_002731681.1	identified by match to protein family HMM PF01658; match to protein family HMM PF07994
YP_002731682.1	identified by match to protein family HMM PF01066
YP_002731684.1	identified by match to protein family HMM PF02463; match to protein family HMM PF06470; match to protein family HMM TIGR02169
YP_002731685.1	activates fatty acids by binding to coenzyme A
YP_002731686.1	identified by match to protein family HMM PF03349
YP_002731687.1	identified by match to protein family HMM PF00155; match to protein family HMM PF04864; match to protein family HMM TIGR01141
YP_002731688.1	identified by match to protein family HMM TIGR01906
YP_002731690.1	identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560
YP_002731691.1	identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR02199
YP_002731692.1	identified by Glimmer3
YP_002731693.1	identified by match to protein family HMM PF00126
YP_002731694.1	identified by match to protein family HMM PF01478; match to protein family HMM PF06750
YP_002731695.1	identified by Glimmer3
YP_002731699.1	catalyzes the hydrolysis of pyrophosphate to phosphate
YP_002731700.1	identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00422
YP_002731701.1	identified by Glimmer3
YP_002731702.1	identified by Glimmer3
YP_002731703.1	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming
YP_002731704.1	identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720; match to protein family HMM PF08238
YP_002731705.1	identified by match to protein family HMM PF00248
YP_002731706.1	identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01579
YP_002731707.1	identified by match to protein family HMM PF00578; match to protein family HMM PF08534
YP_002731708.1	identified by Glimmer3
YP_002731709.1	identified by match to protein family HMM PF00581
YP_002731710.1	identified by match to protein family HMM PF01464
YP_002731711.1	identified by match to protein family HMM PF01464
YP_002731714.1	identified by Glimmer3
YP_002731717.1	identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043
YP_002731718.1	identified by match to protein family HMM PF02562
YP_002731719.1	identified by match to protein family HMM PF01782; match to protein family HMM TIGR02273
YP_002731720.1	identified by match to protein family HMM PF02472
YP_002731721.1	identified by match to protein family HMM PF01618
YP_002731722.1	identified by match to protein family HMM PF00515; match to protein family HMM PF07719
YP_002731723.1	identified by match to protein family HMM PF01467; match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; match to protein family HMM TIGR00125
YP_002731724.1	identified by match to protein family HMM PF02631
YP_002731725.1	identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420
YP_002731726.1	identified by match to protein family HMM PF00154; match to protein family HMM TIGR02012
YP_002731727.1	identified by match to protein family HMM PF02686; match to protein family HMM TIGR00135
YP_002731728.1	identified by match to protein family HMM PF01131; match to protein family HMM PF01751; match to protein family HMM TIGR01051
YP_002731729.1	identified by match to protein family HMM PF01507; match to protein family HMM PF06508; match to protein family HMM TIGR00364
YP_002731730.1	identified by match to protein family HMM PF01551
YP_002731731.1	recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1
YP_002731732.1	identified by Glimmer3
YP_002731733.1	identified by match to protein family HMM PF02636
YP_002731735.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
YP_002731736.1	identified by match to protein family HMM PF01747; match to protein family HMM TIGR00339
YP_002731738.1	identified by match to protein family HMM PF01909
YP_002731739.1	identified by match to protein family HMM PF01909
YP_002731740.1	identified by match to protein family HMM PF00459; match to protein family HMM TIGR01331
YP_002731741.1	identified by match to protein family HMM PF02080; match to protein family HMM PF03600; match to protein family HMM PF06808
YP_002731742.1	identified by match to protein family HMM PF01583; match to protein family HMM TIGR00455
YP_002731743.1	identified by match to protein family HMM PF01909
YP_002731745.1	identified by Glimmer3
YP_002731746.1	identified by match to protein family HMM PF00483; match to protein family HMM TIGR02623
YP_002731747.1	identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719
YP_002731748.1	identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; match to protein family HMM TIGR02622
YP_002731749.1	identified by match to protein family HMM PF01041; match to protein family HMM PF01053
YP_002731750.1	identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993
YP_002731751.1	identified by match to protein family HMM PF00535
YP_002731752.1	identified by match to protein family HMM PF01554; match to protein family HMM PF01943
YP_002731753.1	identified by match to protein family HMM PF04932
YP_002731754.1	identified by match to protein family HMM PF00685
YP_002731755.1	identified by match to protein family HMM PF01370; match to protein family HMM TIGR01472
YP_002731756.1	identified by match to protein family HMM PF00534
YP_002731757.1	identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479
YP_002731759.1	identified by match to protein family HMM PF01850
YP_002731760.1	identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179
YP_002731761.1	identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025
YP_002731763.1	identified by match to protein family HMM PF00753
YP_002731766.1	identified by match to protein family HMM PF08780; match to protein family HMM TIGR01987
YP_002731767.1	identified by match to protein family HMM PF05685
YP_002731768.1	identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498
YP_002731769.1	identified by match to protein family HMM PF01476; match to protein family HMM PF03734
YP_002731771.1	identified by match to protein family HMM TIGR01662; match to protein family HMM TIGR01670
YP_002731772.1	identified by match to protein family HMM PF03848; match to protein family HMM PF08241; match to protein family HMM PF08242
YP_002731773.1	identified by Glimmer3
YP_002731774.1	identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360
YP_002731776.1	identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836
YP_002731777.1	identified by match to protein family HMM PF00543
YP_002731778.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
YP_002731779.1	identified by match to protein family HMM PF00166