-- dump date 20140619_231547 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001411281.1 154250457 5456835 179..442 1 NC_009719.1 PFAM: ribosomal protein S20; KEGG: mes:Meso_4102 ribosomal protein S20; 30S ribosomal protein S20 442 5456835 Plav_0001 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S20 YP_001411281.1 179 D 402881 CDS YP_001411282.1 154250458 5453451 1023..1472 1 NC_009719.1 SMART: Rhodanese domain protein; KEGG: mag:amb2208 rhodanese-related sulfurtransferase; rhodanese domain-containing protein 1472 5453451 Plav_0002 Parvibaculum lavamentivorans DS-1 rhodanese domain-containing protein YP_001411282.1 1023 D 402881 CDS YP_001411283.1 154250459 5453797 1568..3127 1 NC_009719.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA domain; Chromosomal replication initiator DnaA; SMART: AAA ATPase; KEGG: mag:amb0636 ATPase; chromosomal replication initiator protein DnaA 3127 5453797 Plav_0003 Parvibaculum lavamentivorans DS-1 chromosomal replication initiator protein DnaA YP_001411283.1 1568 D 402881 CDS YP_001411284.1 154250460 5456508 3525..4643 1 NC_009719.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 4643 5456508 Plav_0004 Parvibaculum lavamentivorans DS-1 DNA polymerase III subunit beta YP_001411284.1 3525 D 402881 CDS YP_001411285.1 154250461 5454418 4682..5920 1 NC_009719.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; SMART: AAA ATPase; KEGG: mes:Meso_0003 DNA replication and repair protein RecF; DNA replication and repair protein RecF 5920 5454418 Plav_0005 Parvibaculum lavamentivorans DS-1 DNA replication and repair protein RecF YP_001411285.1 4682 D 402881 CDS YP_001411286.1 154250462 5455632 5920..6519 1 NC_009719.1 PFAM: peptidase S14 ClpP; KEGG: hne:HNE_0542 putative ATP-dependent Clp protease, proteolytic subunit ClpP; endopeptidase Clp 6519 5455632 Plav_0006 Parvibaculum lavamentivorans DS-1 endopeptidase Clp YP_001411286.1 5920 D 402881 CDS YP_001411287.1 154250463 5455210 6541..8985 1 NC_009719.1 KEGG: mes:Meso_3603 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 8985 5455210 Plav_0007 Parvibaculum lavamentivorans DS-1 DNA gyrase subunit B YP_001411287.1 6541 D 402881 CDS YP_001411288.1 154250464 5455107 9139..11466 1 NC_009719.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bja:bll0910 penicillin-binding protein; 1A family penicillin-binding protein 11466 5455107 Plav_0008 Parvibaculum lavamentivorans DS-1 1A family penicillin-binding protein YP_001411288.1 9139 D 402881 CDS YP_001411289.1 154250465 5454408 complement(11463..12647) 1 NC_009719.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: maq:Maqu_3797 drug resistance transporter, Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 12647 5454408 Plav_0009 Parvibaculum lavamentivorans DS-1 Bcr/CflA subfamily drug resistance transporter YP_001411289.1 11463 R 402881 CDS YP_001411290.1 154250466 5456300 complement(12644..13456) 1 NC_009719.1 PFAM: protein of unknown function DUF45; KEGG: rru:Rru_A3354 protein of unknown function DUF45; hypothetical protein 13456 5456300 Plav_0010 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411290.1 12644 R 402881 CDS YP_001411291.1 154250467 5456163 13550..13993 1 NC_009719.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rme:Rmet_4906 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 13993 5456163 Plav_0011 Parvibaculum lavamentivorans DS-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001411291.1 13550 D 402881 CDS YP_001411292.1 154250468 5456184 complement(13995..15233) 1 NC_009719.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: rpd:RPD_0126 polyhydroxyalkanoate depolymerase, intracellular; polyhydroxyalkanoate depolymerase 15233 5456184 Plav_0012 Parvibaculum lavamentivorans DS-1 polyhydroxyalkanoate depolymerase YP_001411292.1 13995 R 402881 CDS YP_001411293.1 154250469 5456646 complement(15461..17152) 1 NC_009719.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: bxe:Bxe_A1435 yeast 2-isopropylmalate synthase; 2-isopropylmalate synthase 17152 5456646 Plav_0013 Parvibaculum lavamentivorans DS-1 2-isopropylmalate synthase YP_001411293.1 15461 R 402881 CDS YP_001411294.1 154250470 5456205 complement(17438..18049) 1 NC_009719.1 PFAM: electron transport protein SCO1/SenC; KEGG: rru:Rru_A3360 electron transport protein SCO1/SenC; Classical-complement-pathway C3/C5 convertase 18049 5456205 Plav_0014 Parvibaculum lavamentivorans DS-1 Classical-complement-pathway C3/C5 convertase YP_001411294.1 17438 R 402881 CDS YP_001411295.1 154250471 5456714 18219..18803 1 NC_009719.1 PFAM: Ankyrin; KEGG: sru:SRU_2404 hypothetical protein; ankyrin 18803 5456714 Plav_0015 Parvibaculum lavamentivorans DS-1 ankyrin YP_001411295.1 18219 D 402881 CDS YP_001411296.1 154250472 5453662 18899..19969 1 NC_009719.1 KEGG: ftw:FTW_2008 hypothetical protein; hypothetical protein 19969 5453662 Plav_0016 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411296.1 18899 D 402881 CDS YP_001411297.1 154250473 5455512 20068..21474 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bmb:BruAb1_0130 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 21474 5455512 Plav_0017 Parvibaculum lavamentivorans DS-1 integral membrane sensor signal transduction histidine kinase YP_001411297.1 20068 D 402881 CDS YP_001411298.1 154250474 5456310 21475..22101 1 NC_009719.1 PFAM: response regulator receiver; KEGG: mes:Meso_4041 response regulator receiver protein; two component Fis family transcriptional regulator 22101 5456310 Plav_0018 Parvibaculum lavamentivorans DS-1 two component Fis family transcriptional regulator YP_001411298.1 21475 D 402881 CDS YP_001411299.1 154250475 5456085 complement(22104..22400) 1 NC_009719.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: gur:Gura_1216 plasmid maintenance system antidote protein, XRE family; XRE family plasmid maintenance system antidote protein 22400 5456085 Plav_0019 Parvibaculum lavamentivorans DS-1 XRE family plasmid maintenance system antidote protein YP_001411299.1 22104 R 402881 CDS YP_001411300.1 154250476 5453843 complement(22425..22703) 1 NC_009719.1 PFAM: plasmid maintenance system killer; KEGG: rpc:RPC_4140 plasmid maintenance system killer; plasmid maintenance system killer protein 22703 5453843 Plav_0020 Parvibaculum lavamentivorans DS-1 plasmid maintenance system killer protein YP_001411300.1 22425 R 402881 CDS YP_001411301.1 154250477 5453952 complement(22748..23236) 1 NC_009719.1 PFAM: protein of unknown function DUF1052; KEGG: hypothetical protein; hypothetical protein 23236 5453952 Plav_0021 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411301.1 22748 R 402881 CDS YP_001411302.1 154250478 5456781 complement(23247..24209) 1 NC_009719.1 PFAM: aminoglycoside phosphotransferase; KEGG: mxa:MXAN_0104 aminoglycoside phosphotransferase family protein; aminoglycoside phosphotransferase 24209 5456781 Plav_0022 Parvibaculum lavamentivorans DS-1 aminoglycoside phosphotransferase YP_001411302.1 23247 R 402881 CDS YP_001411303.1 154250479 5453916 complement(24241..25362) 1 NC_009719.1 KEGG: abo:ABO_1416 hypothetical protein; hypothetical protein 25362 5453916 Plav_0023 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411303.1 24241 R 402881 CDS YP_001411304.1 154250480 5453564 25618..26940 1 NC_009719.1 KEGG: rru:Rru_A3761 hypothetical protein; hypothetical protein 26940 5453564 Plav_0024 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411304.1 25618 D 402881 CDS YP_001411305.1 154250481 5456616 27133..28401 1 NC_009719.1 PFAM: cytochrome P450; KEGG: cytochrome P450 family protein; cytochrome P450 28401 5456616 Plav_0025 Parvibaculum lavamentivorans DS-1 cytochrome P450 YP_001411305.1 27133 D 402881 CDS YP_001411306.1 154250482 5456287 28472..29842 1 NC_009719.1 KEGG: hypothetical protein; hypothetical protein 29842 5456287 Plav_0026 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411306.1 28472 D 402881 CDS YP_001411307.1 154250483 5455109 30314..32665 1 NC_009719.1 KEGG: azo:azo2253 probable exporter of RND superfamily; RND superfamily exporter 32665 5455109 Plav_0027 Parvibaculum lavamentivorans DS-1 RND superfamily exporter YP_001411307.1 30314 D 402881 CDS YP_001411308.1 154250484 5455733 32770..33618 1 NC_009719.1 PFAM: Sterol desaturase; KEGG: atc:AGR_C_556 hypothetical protein; sterol desaturase 33618 5455733 Plav_0028 Parvibaculum lavamentivorans DS-1 sterol desaturase YP_001411308.1 32770 D 402881 CDS YP_001411309.1 154250485 5456945 complement(33622..34875) 1 NC_009719.1 PFAM: cytochrome P450; KEGG: aci:ACIAD1575 linalool 8-monooxygenase (cytochrome P450 111) (cytochrome P450lin); cytochrome P450 34875 5456945 Plav_0029 Parvibaculum lavamentivorans DS-1 cytochrome P450 YP_001411309.1 33622 R 402881 CDS YP_001411310.1 154250486 5453814 complement(34929..35570) 1 NC_009719.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hydrolase, haloacid dehalogenase-like family; K07025 putative hydrolase of the HAD superfamily; HAD family phosphatase 35570 5453814 Plav_0030 Parvibaculum lavamentivorans DS-1 HAD family phosphatase YP_001411310.1 34929 R 402881 CDS YP_001411311.1 154250487 5454469 complement(35655..36659) 1 NC_009719.1 PFAM: Sporulation domain protein; KEGG: rpe:RPE_2692 sporulation domain protein; sporulation domain-containing protein 36659 5454469 Plav_0031 Parvibaculum lavamentivorans DS-1 sporulation domain-containing protein YP_001411311.1 35655 R 402881 CDS YP_001411312.1 154250488 5455688 complement(36659..37363) 1 NC_009719.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: nar:Saro_3065 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 37363 5455688 Plav_0032 Parvibaculum lavamentivorans DS-1 cobyrinic acid ac-diamide synthase YP_001411312.1 36659 R 402881 CDS YP_001411313.1 154250489 5453654 complement(37628..38929) 1 NC_009719.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: gox:GOX0719 adenosylmethionine--8-amino-7-oxononanoate transaminase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 38929 5453654 Plav_0033 Parvibaculum lavamentivorans DS-1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_001411313.1 37628 R 402881 CDS YP_001411314.1 154250490 5455020 39183..39785 1 NC_009719.1 KEGG: mxa:MXAN_0975 hypothetical protein; hypothetical protein 39785 5455020 Plav_0034 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411314.1 39183 D 402881 CDS YP_001411315.1 154250491 5455068 39782..40132 1 NC_009719.1 KEGG: hypothetical protein; hypothetical protein 40132 5455068 Plav_0035 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411315.1 39782 D 402881 CDS YP_001411316.1 154250492 5454827 complement(40109..41215) 1 NC_009719.1 KEGG: sde:Sde_3139 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 41215 5454827 Plav_0036 Parvibaculum lavamentivorans DS-1 biotin synthase YP_001411316.1 40109 R 402881 CDS YP_001411317.1 154250493 5455340 complement(41259..41918) 1 NC_009719.1 PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: mmr:Mmar10_1675 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 41918 5455340 Plav_0037 Parvibaculum lavamentivorans DS-1 2OG-Fe(II) oxygenase YP_001411317.1 41259 R 402881 CDS YP_001411318.1 154250494 5456811 42013..42885 1 NC_009719.1 KEGG: mmr:Mmar10_1676 hypothetical protein; hypothetical protein 42885 5456811 Plav_0038 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411318.1 42013 D 402881 CDS YP_001411319.1 154250495 5455540 42959..44146 1 NC_009719.1 TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; KEGG: acr:Acry_1868 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase 44146 5455540 Plav_0039 Parvibaculum lavamentivorans DS-1 8-amino-7-oxononanoate synthase YP_001411319.1 42959 D 402881 CDS YP_001411320.1 154250496 5456055 44147..44794 1 NC_009719.1 TIGRFAM: dethiobiotin synthase; KEGG: acr:Acry_1867 dethiobiotin synthase; dethiobiotin synthase 44794 5456055 Plav_0040 Parvibaculum lavamentivorans DS-1 dethiobiotin synthase YP_001411320.1 44147 D 402881 CDS YP_001411321.1 154250497 5456172 complement(44796..45086) 1 NC_009719.1 KEGG: ftn:FTN_0314 hypothetical protein; hypothetical protein 45086 5456172 Plav_0041 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411321.1 44796 R 402881 CDS YP_001411322.1 154250498 5456133 complement(45161..45340) 1 NC_009719.1 KEGG: rfr:Rfer_1454 hypothetical protein; hypothetical protein 45340 5456133 Plav_0042 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411322.1 45161 R 402881 CDS YP_001411323.1 154250499 5453718 complement(45433..45948) 1 NC_009719.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: mac:MA4322 methylated-DNA-[protein]-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase 45948 5453718 Plav_0043 Parvibaculum lavamentivorans DS-1 methylated-DNA--protein-cysteine methyltransferase YP_001411323.1 45433 R 402881 CDS YP_001411324.1 154250500 5455529 complement(45950..47491) 1 NC_009719.1 PFAM: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; Ada metal-binding domain protein; AlkA domain protein; KEGG: rru:Rru_A3357 transcriptional regulator, AraC family; Ada metal-binding domain-containing protein 47491 5455529 Plav_0044 Parvibaculum lavamentivorans DS-1 Ada metal-binding domain-containing protein YP_001411324.1 45950 R 402881 CDS YP_001411325.1 154250501 5455890 47696..49030 1 NC_009719.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pat:Patl_3455 major facilitator superfamily MFS_1; major facilitator superfamily transporter 49030 5455890 Plav_0045 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001411325.1 47696 D 402881 CDS YP_001411326.1 154250502 5453749 49183..50193 1 NC_009719.1 TIGRFAM: Alcohol dehydrogenase zinc-binding type 2; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rxy:Rxyl_0056 alcohol dehydrogenase GroES-like protein; alcohol dehydrogenase zinc-binding type 2 50193 5453749 Plav_0046 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase zinc-binding type 2 YP_001411326.1 49183 D 402881 CDS YP_001411327.1 154250503 5454868 50270..51079 1 NC_009719.1 KEGG: psa:PST_4027 phosphate ABC transporter, periplasmic phosphate-binding protein; phosphate ABC transporter substrate-binding protein 51079 5454868 Plav_0047 Parvibaculum lavamentivorans DS-1 phosphate ABC transporter substrate-binding protein YP_001411327.1 50270 D 402881 CDS YP_001411328.1 154250504 5455967 complement(51324..52721) 1 NC_009719.1 PFAM: phosphate-selective porin O and P; KEGG: bja:blr5369 outer membrane porin; phosphate-selective porin O and P 52721 5455967 Plav_0048 Parvibaculum lavamentivorans DS-1 phosphate-selective porin O and P YP_001411328.1 51324 R 402881 CDS YP_001411329.1 154250505 5455950 complement(53032..54252) 1 NC_009719.1 PFAM: OsmC family protein; KEGG: sme:SMa1898 putative redox protein; OsmC family protein 54252 5455950 Plav_0049 Parvibaculum lavamentivorans DS-1 OsmC family protein YP_001411329.1 53032 R 402881 CDS YP_001411330.1 154250506 5454371 54466..55257 1 NC_009719.1 PFAM: PRC-barrel domain protein; KEGG: hne:HNE_2890 hypothetical protein; PRC-barrel domain-containing protein 55257 5454371 Plav_0050 Parvibaculum lavamentivorans DS-1 PRC-barrel domain-containing protein YP_001411330.1 54466 D 402881 CDS YP_001411331.1 154250507 5456339 complement(55568..57325) 1 NC_009719.1 PFAM: histidine kinase HAMP region domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: rsh:Rsph17029_2929 signal transduction histidine kinase; signal transduction histidine kinase 57325 5456339 Plav_0051 Parvibaculum lavamentivorans DS-1 signal transduction histidine kinase YP_001411331.1 55568 R 402881 CDS YP_001411332.1 154250508 5453661 57786..58580 1 NC_009719.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 58580 5453661 Plav_0052 Parvibaculum lavamentivorans DS-1 two-component response regulator YP_001411332.1 57786 D 402881 CDS YP_001411333.1 154250509 5455453 complement(58670..59275) 1 NC_009719.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: swi:Swit_3924 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 59275 5455453 Plav_0053 Parvibaculum lavamentivorans DS-1 ECF subfamily RNA polymerase sigma-24 factor YP_001411333.1 58670 R 402881 CDS YP_001411334.1 154250510 5455594 complement(59281..59502) 1 NC_009719.1 hypothetical protein 59502 5455594 Plav_0054 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411334.1 59281 R 402881 CDS YP_001411335.1 154250511 5455966 complement(59742..59939) 1 NC_009719.1 PFAM: CsbD family protein; KEGG: mlo:msl9551 hypothetical protein; CsbD family protein 59939 5455966 Plav_0055 Parvibaculum lavamentivorans DS-1 CsbD family protein YP_001411335.1 59742 R 402881 CDS YP_001411336.1 154250512 5453569 complement(60108..60284) 1 NC_009719.1 PFAM: protein of unknown function DUF1328; KEGG: mes:Meso_3110 protein of unknown function DUF1328; hypothetical protein 60284 5453569 Plav_0056 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411336.1 60108 R 402881 CDS YP_001411337.1 154250513 5454274 complement(60343..60558) 1 NC_009719.1 PFAM: Entericidin EcnAB; KEGG: hypothetical protein; entericidin EcnAB 60558 5454274 Plav_0057 Parvibaculum lavamentivorans DS-1 entericidin EcnAB YP_001411337.1 60343 R 402881 CDS YP_001411338.1 154250514 5453969 complement(60579..61100) 1 NC_009719.1 PFAM: MgtC/SapB transporter; KEGG: mes:Meso_3446 MgtC/SapB transporter; MgtC/SapB transporter 61100 5453969 Plav_0058 Parvibaculum lavamentivorans DS-1 MgtC/SapB transporter YP_001411338.1 60579 R 402881 CDS YP_001411339.1 154250515 5455741 complement(61164..61439) 1 NC_009719.1 hypothetical protein 61439 5455741 Plav_0059 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411339.1 61164 R 402881 CDS YP_001411340.1 154250516 5454375 61602..61832 1 NC_009719.1 KEGG: azo:azo1749 conserved hypothetical membrane protein; hypothetical protein 61832 5454375 Plav_0060 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411340.1 61602 D 402881 CDS YP_001411341.1 154250517 5456293 complement(61859..62464) 1 NC_009719.1 PFAM: MOSC domain containing protein; KEGG: rpe:RPE_1637 MOSC domain containing protein; MOSC domain-containing protein 62464 5456293 Plav_0061 Parvibaculum lavamentivorans DS-1 MOSC domain-containing protein YP_001411341.1 61859 R 402881 CDS YP_001411342.1 154250518 5453934 62801..63292 1 NC_009719.1 KEGG: rpb:RPB_0921 hypothetical protein; hypothetical protein 63292 5453934 Plav_0062 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411342.1 62801 D 402881 CDS YP_001411343.1 154250519 5455048 complement(63308..63760) 1 NC_009719.1 hypothetical protein 63760 5455048 Plav_0063 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411343.1 63308 R 402881 CDS YP_001411344.1 154250520 5455584 complement(63853..64227) 1 NC_009719.1 PFAM: response regulator receiver; KEGG: mgi:Mflv_1744 two component transcriptional regulator, winged helix family; response regulator receiver protein 64227 5455584 Plav_0064 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001411344.1 63853 R 402881 CDS YP_001411345.1 154250521 5456089 complement(64350..64739) 1 NC_009719.1 PFAM: response regulator receiver; KEGG: sbl:Sbal_2050 two component transcriptional regulator, winged helix family; response regulator receiver protein 64739 5456089 Plav_0065 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001411345.1 64350 R 402881 CDS YP_001411346.1 154250522 5453877 complement(64830..66530) 1 NC_009719.1 KEGG: nwi:Nwi_2535 hypothetical protein; hypothetical protein 66530 5453877 Plav_0066 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411346.1 64830 R 402881 CDS YP_001411347.1 154250523 5456415 66777..67808 1 NC_009719.1 KEGG: bch:Bcen2424_6766 PE-PGRS family protein; PE-PGRS family protein 67808 5456415 Plav_0067 Parvibaculum lavamentivorans DS-1 PE-PGRS family protein YP_001411347.1 66777 D 402881 CDS YP_001411348.1 154250524 5454363 complement(67908..69587) 1 NC_009719.1 PFAM: surface antigen variable number repeat protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: bcn:Bcen_1034 polypeptide-transport-associated, ShlB-type; polypeptide-transport-associated domain-containing protein 69587 5454363 Plav_0068 Parvibaculum lavamentivorans DS-1 polypeptide-transport-associated domain-containing protein YP_001411348.1 67908 R 402881 CDS YP_001411349.1 154250525 5456534 70095..71048 1 NC_009719.1 PFAM: SAF domain protein; KEGG: bcn:Bcen_1040 Flp pilus assembly CpaB; SAF domain-containing protein 71048 5456534 Plav_0069 Parvibaculum lavamentivorans DS-1 SAF domain-containing protein YP_001411349.1 70095 D 402881 CDS YP_001411350.1 154250526 5455094 71065..72450 1 NC_009719.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: swi:Swit_3514 type II and III secretion system protein; type II and III secretion system protein 72450 5455094 Plav_0070 Parvibaculum lavamentivorans DS-1 type II and III secretion system protein YP_001411350.1 71065 D 402881 CDS YP_001411351.1 154250527 5455559 72457..73650 1 NC_009719.1 PFAM: response regulator receiver; KEGG: rme:Rmet_3655 response regulator receiver domain protein (CheY-like); response regulator receiver protein 73650 5455559 Plav_0071 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001411351.1 72457 D 402881 CDS YP_001411352.1 154250528 5455261 73647..74873 1 NC_009719.1 PFAM: type II secretion system protein E; KEGG: swi:Swit_3512 type II secretion system protein E; type II secretion system protein E 74873 5455261 Plav_0072 Parvibaculum lavamentivorans DS-1 type II secretion system protein E YP_001411352.1 73647 D 402881 CDS YP_001411353.1 154250529 5455664 74940..75815 1 NC_009719.1 PFAM: type II secretion system protein; KEGG: swi:Swit_3511 type II secretion system protein; type II secretion system protein 75815 5455664 Plav_0073 Parvibaculum lavamentivorans DS-1 type II secretion system protein YP_001411353.1 74940 D 402881 CDS YP_001411354.1 154250530 5455868 75821..76768 1 NC_009719.1 PFAM: type II secretion system protein; KEGG: swi:Swit_3510 type II secretion system protein; type II secretion system protein 76768 5455868 Plav_0074 Parvibaculum lavamentivorans DS-1 type II secretion system protein YP_001411354.1 75821 D 402881 CDS YP_001411355.1 154250531 5456374 76765..77478 1 NC_009719.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: bam:Bamb_1408 tetratricopeptide TPR_2 repeat protein; hypothetical protein 77478 5456374 Plav_0075 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411355.1 76765 D 402881 CDS YP_001411356.1 154250532 5455832 77478..77720 1 NC_009719.1 hypothetical protein 77720 5455832 Plav_0076 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411356.1 77478 D 402881 CDS YP_001411357.1 154250533 5455881 77865..78155 1 NC_009719.1 PFAM: Flp/Fap pilin component; KEGG: rpd:RPD_3517 Flp/Fap pilin component; Flp/Fap pilin component 78155 5455881 Plav_0077 Parvibaculum lavamentivorans DS-1 Flp/Fap pilin component YP_001411357.1 77865 D 402881 CDS YP_001411358.1 154250534 5456217 78243..78665 1 NC_009719.1 PFAM: TadE family protein; KEGG: nca:Noca_3251 TadE family protein; TadE family protein 78665 5456217 Plav_0078 Parvibaculum lavamentivorans DS-1 TadE family protein YP_001411358.1 78243 D 402881 CDS YP_001411359.1 154250535 5456552 78675..80807 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: psp:PSPPH_4416 sensory box histidine kinase; histidine kinase 80807 5456552 Plav_0079 Parvibaculum lavamentivorans DS-1 histidine kinase YP_001411359.1 78675 D 402881 CDS YP_001411360.1 154250536 5453868 complement(80820..81593) 1 NC_009719.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gox:GOX1600 two component response regulator; two component transcriptional regulator 81593 5453868 Plav_0080 Parvibaculum lavamentivorans DS-1 two component transcriptional regulator YP_001411360.1 80820 R 402881 CDS YP_001411361.1 154250537 5456515 complement(82194..82613) 1 NC_009719.1 hypothetical protein 82613 5456515 Plav_0081 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411361.1 82194 R 402881 CDS YP_001411362.1 154250538 5454601 complement(82741..84153) 1 NC_009719.1 PFAM: cytochrome P450; KEGG: mxa:MXAN_2304 cytochrome P450 family protein; cytochrome P450 84153 5454601 Plav_0082 Parvibaculum lavamentivorans DS-1 cytochrome P450 YP_001411362.1 82741 R 402881 CDS YP_001411363.1 154250539 5454760 complement(84177..85025) 1 NC_009719.1 KEGG: pmy:Pmen_3653 metal-dependent hydrolase-like protein; metal-dependent hydrolase-like protein 85025 5454760 Plav_0083 Parvibaculum lavamentivorans DS-1 metal-dependent hydrolase-like protein YP_001411363.1 84177 R 402881 CDS YP_001411364.1 154250540 5456933 85148..86212 1 NC_009719.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pau:PA14_53520 transcriptional regulator OruR; helix-turn-helix domain-containing protein 86212 5456933 Plav_0084 Parvibaculum lavamentivorans DS-1 helix-turn-helix domain-containing protein YP_001411364.1 85148 D 402881 CDS YP_001411365.1 154250541 5454352 86257..87141 1 NC_009719.1 KEGG: bxe:Bxe_A2804 putative membrane protein, glycine-rich; putative membrane protein, glycine-rich 87141 5454352 Plav_0085 Parvibaculum lavamentivorans DS-1 putative membrane protein, glycine-rich YP_001411365.1 86257 D 402881 CDS YP_001411366.1 154250542 5456978 87350..88216 1 NC_009719.1 KEGG: bam:Bamb_1398 hypothetical protein; hypothetical protein 88216 5456978 Plav_0086 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411366.1 87350 D 402881 CDS YP_001411367.1 154250543 5454796 88270..90267 1 NC_009719.1 PFAM: protein of unknown function DUF1302; KEGG: pau:PA14_13130 hypothetical protein; hypothetical protein 90267 5454796 Plav_0087 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411367.1 88270 D 402881 CDS YP_001411368.1 154250544 5456715 complement(90359..91024) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: hne:HNE_2401 transcriptional regulator, TetR family; TetR family transcriptional regulator 91024 5456715 Plav_0088 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001411368.1 90359 R 402881 CDS YP_001411369.1 154250545 5456207 91116..92222 1 NC_009719.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: hne:HNE_2119 aryl-alcohol dehydrogenase; alcohol dehydrogenase 92222 5456207 Plav_0089 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001411369.1 91116 D 402881 CDS YP_001411370.1 154250546 5456737 92262..93506 1 NC_009719.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 93506 5456737 Plav_0090 Parvibaculum lavamentivorans DS-1 acetyl-CoA acetyltransferase YP_001411370.1 92262 D 402881 CDS YP_001411371.1 154250547 5454547 93572..93988 1 NC_009719.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: transcriptional regulator, putative; MerR family transcriptional regulator 93988 5454547 Plav_0091 Parvibaculum lavamentivorans DS-1 MerR family transcriptional regulator YP_001411371.1 93572 D 402881 CDS YP_001411372.1 154250548 5456355 94039..95442 1 NC_009719.1 PFAM: aldehyde dehydrogenase; KEGG: bbt:BBta_3845 putative aldehyde dehydrogenase family protein; aldehyde dehydrogenase 95442 5456355 Plav_0092 Parvibaculum lavamentivorans DS-1 aldehyde dehydrogenase YP_001411372.1 94039 D 402881 CDS YP_001411373.1 154250549 5453538 complement(95540..96799) 1 NC_009719.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; Ferric reductase domain protein transmembrane component domain; KEGG: pfl:PFL_2917 oxidoreductase, FAD-binding; ferric reductase domain-containing protein 96799 5453538 Plav_0093 Parvibaculum lavamentivorans DS-1 ferric reductase domain-containing protein YP_001411373.1 95540 R 402881 CDS YP_001411374.1 154250550 5456689 complement(96883..97236) 1 NC_009719.1 PFAM: protein of unknown function DUF454; KEGG: sal:Sala_1520 protein of unknown function DUF454; hypothetical protein 97236 5456689 Plav_0094 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411374.1 96883 R 402881 CDS YP_001411375.1 154250551 5455864 complement(97370..98962) 1 NC_009719.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 98962 5455864 Plav_0095 Parvibaculum lavamentivorans DS-1 aspartate aminotransferase YP_001411375.1 97370 R 402881 CDS YP_001411376.1 154250552 5454616 complement(98980..100665) 1 NC_009719.1 TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: zmo:ZMO1681 aspartate:alanine antiporter; YidE/YbjL protein 100665 5454616 Plav_0096 Parvibaculum lavamentivorans DS-1 YidE/YbjL protein YP_001411376.1 98980 R 402881 CDS YP_001411377.1 154250553 5454020 complement(104498..104803) 1 NC_009719.1 TIGRFAM: CRISPR-associated protein Cas2; KEGG: bfs:BF3950 hypothetical protein; CRISPR-associated Cas2 family protein 104803 5454020 Plav_0097 Parvibaculum lavamentivorans DS-1 CRISPR-associated Cas2 family protein YP_001411377.1 104498 R 402881 CDS YP_001411378.1 154250554 5453585 complement(104851..105786) 1 NC_009719.1 TIGRFAM: CRISPR-associated protein Cas1; KEGG: bfs:BF3951 hypothetical protein; CRISPR-associated Cas1 family protein 105786 5453585 Plav_0098 Parvibaculum lavamentivorans DS-1 CRISPR-associated Cas1 family protein YP_001411378.1 104851 R 402881 CDS YP_001411379.1 154250555 5454634 complement(105795..108908) 1 NC_009719.1 TIGRFAM: CRISPR-associated protein, Csn1 family; KEGG: vei:Veis_1230 CRISPR-associated protein, Csn1 family; CRISPR-associated endonuclease Csn1 family protein 108908 5454634 Plav_0099 Parvibaculum lavamentivorans DS-1 CRISPR-associated endonuclease Csn1 family protein YP_001411379.1 105795 R 402881 CDS YP_001411380.1 154250556 5453801 109701..110807 1 NC_009719.1 KEGG: deb:DehaBAV1_0084 hypothetical protein; hypothetical protein 110807 5453801 Plav_0100 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411380.1 109701 D 402881 CDS YP_001411381.1 154250557 5455079 110801..111049 1 NC_009719.1 hypothetical protein 111049 5455079 Plav_0101 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411381.1 110801 D 402881 CDS YP_001411382.1 154250558 5454218 111209..112822 1 NC_009719.1 PFAM: Resolvase domain; Recombinase; KEGG: nha:Nham_0568 recombinase; resolvase domain-containing protein 112822 5454218 Plav_0102 Parvibaculum lavamentivorans DS-1 resolvase domain-containing protein YP_001411382.1 111209 D 402881 CDS YP_001411383.1 154250559 5453517 113053..113553 1 NC_009719.1 PFAM: protein of unknown function DUF1457; KEGG: sme:SMc01000 hypothetical protein; hypothetical protein 113553 5453517 Plav_0103 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411383.1 113053 D 402881 CDS YP_001411384.1 154250560 5453367 complement(113555..114556) 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hne:HNE_1881 ABC transporter, ATP-binding protein; ABC transporter-like protein 114556 5453367 Plav_0104 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001411384.1 113555 R 402881 CDS YP_001411385.1 154250561 5454288 114688..117627 1 NC_009719.1 KEGG: bme:BMEI1825 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; DNA polymerase I 117627 5454288 Plav_0105 Parvibaculum lavamentivorans DS-1 DNA polymerase I YP_001411385.1 114688 D 402881 CDS YP_001411386.1 154250562 5453466 117683..117991 1 NC_009719.1 KEGG: mes:Meso_2799 hypothetical protein; hypothetical protein 117991 5453466 Plav_0106 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411386.1 117683 D 402881 CDS YP_001411387.1 154250563 5455900 complement(118052..118792) 1 NC_009719.1 KEGG: pau:PA14_14140 hypothetical protein; hypothetical protein 118792 5455900 Plav_0107 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411387.1 118052 R 402881 CDS YP_001411388.1 154250564 5454182 118896..119618 1 NC_009719.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: mlo:mlr3764 transcriptional regulator(repressor protein); helix-turn-helix domain-containing protein 119618 5454182 Plav_0108 Parvibaculum lavamentivorans DS-1 helix-turn-helix domain-containing protein YP_001411388.1 118896 D 402881 CDS YP_001411389.1 154250565 5454672 complement(119678..121291) 1 NC_009719.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 121291 5454672 Plav_0109 Parvibaculum lavamentivorans DS-1 phosphoenolpyruvate carboxykinase YP_001411389.1 119678 R 402881 CDS YP_001411390.1 154250566 5455051 complement(121739..123388) 1 NC_009719.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mxa:MXAN_2289 peptidase, M20E (Gly-X carboxypeptidase) subfamily; hypothetical protein 123388 5455051 Plav_0110 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411390.1 121739 R 402881 CDS YP_001411391.1 154250567 5455415 123573..124274 1 NC_009719.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mes:Meso_3571 two component transcriptional regulator, winged helix family; two component transcriptional regulator 124274 5455415 Plav_0111 Parvibaculum lavamentivorans DS-1 two component transcriptional regulator YP_001411391.1 123573 D 402881 CDS YP_001411392.1 154250568 5454332 124320..126167 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sme:SMc04446 histidine kinase sensory transmembrane protein; integral membrane sensor signal transduction histidine kinase 126167 5454332 Plav_0112 Parvibaculum lavamentivorans DS-1 integral membrane sensor signal transduction histidine kinase YP_001411392.1 124320 D 402881 CDS YP_001411393.1 154250569 5456187 126173..126649 1 NC_009719.1 KEGG: rru:Rru_A3449 HPr kinase; HPr kinase 126649 5456187 Plav_0113 Parvibaculum lavamentivorans DS-1 HPr kinase YP_001411393.1 126173 D 402881 CDS YP_001411394.1 154250570 5455024 126847..127254 1 NC_009719.1 PFAM: PTS system fructose subfamily IIA component; KEGG: mag:amb4395 phosphotransferase system, mannose/fructose-specific component IIA; PTS system fructose subfamily transporter subunit IIA 127254 5455024 Plav_0114 Parvibaculum lavamentivorans DS-1 PTS system fructose subfamily transporter subunit IIA YP_001411394.1 126847 D 402881 CDS YP_001411395.1 154250571 5456353 127257..127562 1 NC_009719.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: bov:BOV_2014 phosphocarrier protein HPr; phosphotransferase system, phosphocarrier protein HPr 127562 5456353 Plav_0115 Parvibaculum lavamentivorans DS-1 phosphotransferase system, phosphocarrier protein HPr YP_001411395.1 127257 D 402881 CDS YP_001411396.1 154250572 5453353 complement(127564..128388) 1 NC_009719.1 KEGG: rme:Rmet_0145 hypothetical protein; hypothetical protein 128388 5453353 Plav_0116 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411396.1 127564 R 402881 CDS YP_001411397.1 154250573 5454161 128691..130109 1 NC_009719.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 130109 5454161 Plav_0117 Parvibaculum lavamentivorans DS-1 S-adenosyl-L-homocysteine hydrolase YP_001411397.1 128691 D 402881 CDS YP_001411398.1 154250574 5453831 130284..132869 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: nha:Nham_0053 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 132869 5453831 Plav_0118 Parvibaculum lavamentivorans DS-1 PAS/PAC sensor signal transduction histidine kinase YP_001411398.1 130284 D 402881 CDS YP_001411399.1 154250575 5453744 complement(133088..133387) 1 NC_009719.1 KEGG: rpc:RPC_0601 hypothetical protein; hypothetical protein 133387 5453744 Plav_0119 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411399.1 133088 R 402881 CDS YP_001411400.1 154250576 5453686 complement(133384..133788) 1 NC_009719.1 hypothetical protein 133788 5453686 Plav_0120 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411400.1 133384 R 402881 CDS YP_001411401.1 154250577 5455083 133957..134691 1 NC_009719.1 KEGG: pol:Bpro_3007 glutathione S-transferase-like; glutathione S-transferase-like protein 134691 5455083 Plav_0121 Parvibaculum lavamentivorans DS-1 glutathione S-transferase-like protein YP_001411401.1 133957 D 402881 CDS YP_001411402.1 154250578 5454607 complement(134821..135360) 1 NC_009719.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: superoxide dismutase, Cu-Zn; copper/zinc binding superoxide dismutase 135360 5454607 Plav_0122 Parvibaculum lavamentivorans DS-1 copper/zinc binding superoxide dismutase YP_001411402.1 134821 R 402881 CDS YP_001411403.1 154250579 5456728 135657..136124 1 NC_009719.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rso:RSc1890 probable isoquinoline 1-oxidoreductase (alpha subunit) oxidoreductase protein; 2Fe-2S iron-sulfur cluster-binding domain-containing protein 136124 5456728 Plav_0123 Parvibaculum lavamentivorans DS-1 2Fe-2S iron-sulfur cluster-binding domain-containing protein YP_001411403.1 135657 D 402881 CDS YP_001411404.1 154250580 5454510 136138..138402 1 NC_009719.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: eli:ELI_11225 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase 138402 5454510 Plav_0124 Parvibaculum lavamentivorans DS-1 molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase YP_001411404.1 136138 D 402881 CDS YP_001411405.1 154250581 5455883 complement(138461..138850) 1 NC_009719.1 hypothetical protein 138850 5455883 Plav_0125 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411405.1 138461 R 402881 CDS YP_001411406.1 154250582 5454144 complement(138911..139231) 1 NC_009719.1 PFAM: ferredoxin; KEGG: ferredoxin, 2Fe-2S; K04755 ferredoxin, 2Fe-2S; ferredoxin 139231 5454144 Plav_0126 Parvibaculum lavamentivorans DS-1 ferredoxin YP_001411406.1 138911 R 402881 CDS YP_001411407.1 154250583 5455517 complement(139296..140516) 1 NC_009719.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pol:Bpro_5300 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 140516 5455517 Plav_0127 Parvibaculum lavamentivorans DS-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001411407.1 139296 R 402881 CDS YP_001411408.1 154250584 5455132 complement(141576..142709) 1 NC_009719.1 KEGG: sit:TM1040_3368 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway)-like; 2-keto-4-pentenoate hydratase 142709 5455132 Plav_0128 Parvibaculum lavamentivorans DS-1 2-keto-4-pentenoate hydratase YP_001411408.1 141576 R 402881 CDS YP_001411409.1 154250585 5454888 complement(142720..143169) 1 NC_009719.1 KEGG: mjl:Mjls_2634 hypothetical protein; hypothetical protein 143169 5454888 Plav_0129 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411409.1 142720 R 402881 CDS YP_001411410.1 154250586 5453531 complement(143180..143959) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_C0589 putative short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 143959 5453531 Plav_0130 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001411410.1 143180 R 402881 CDS YP_001411411.1 154250587 5454129 complement(143979..145649) 1 NC_009719.1 PFAM: monooxygenase FAD-binding; KEGG: rha:RHA1_ro10313 probable 2,4-dichlorophenol 6-monooxygenase; 2,4-dichlorophenol 6-monooxygenase 145649 5454129 Plav_0131 Parvibaculum lavamentivorans DS-1 2,4-dichlorophenol 6-monooxygenase YP_001411411.1 143979 R 402881 CDS YP_001411412.1 154250588 5453940 145741..146355 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: mlo:mll2397 probable transcriptional regulator; TetR family transcriptional regulator 146355 5453940 Plav_0132 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001411412.1 145741 D 402881 CDS YP_001411413.1 154250589 5455369 146548..147027 1 NC_009719.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rpa:RPA1115 hypothetical protein; alkylhydroperoxidase 147027 5455369 Plav_0133 Parvibaculum lavamentivorans DS-1 alkylhydroperoxidase YP_001411413.1 146548 D 402881 CDS YP_001411414.1 154250590 5454364 147089..147583 1 NC_009719.1 PFAM: protein of unknown function UPF0079; KEGG: bmb:BruAb1_2075 conserved hypothetical protein TIGR00150; hypothetical protein 147583 5454364 Plav_0134 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411414.1 147089 D 402881 CDS YP_001411415.1 154250591 5455709 147580..148668 1 NC_009719.1 PFAM: aminoglycoside phosphotransferase; KEGG: atc:AGR_C_43 unknown; aminoglycoside phosphotransferase 148668 5455709 Plav_0135 Parvibaculum lavamentivorans DS-1 aminoglycoside phosphotransferase YP_001411415.1 147580 D 402881 CDS YP_001411416.1 154250592 5454667 148665..149375 1 NC_009719.1 PFAM: Nucleotidyl transferase; KEGG: bja:bll0754 nucleotidyltransferase family protein; nucleotidyl transferase 149375 5454667 Plav_0136 Parvibaculum lavamentivorans DS-1 nucleotidyl transferase YP_001411416.1 148665 D 402881 CDS YP_001411417.1 154250593 5455859 149401..152406 1 NC_009719.1 TIGRFAM: Double-strand break repair protein AddB; KEGG: mag:amb0421 inactivated superfamily I helicase; double-strand break repair protein AddB 152406 5455859 Plav_0137 Parvibaculum lavamentivorans DS-1 double-strand break repair protein AddB YP_001411417.1 149401 D 402881 CDS YP_001411418.1 154250594 5454433 152403..155873 1 NC_009719.1 TIGRFAM: Double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; KEGG: mag:amb4162 ATP-dependent exoDNAse beta subunit; double-strand break repair helicase AddA 155873 5454433 Plav_0138 Parvibaculum lavamentivorans DS-1 double-strand break repair helicase AddA YP_001411418.1 152403 D 402881 CDS YP_001411419.1 154250595 5455630 155990..156310 1 NC_009719.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mag:amb4286 thiol-disulfide isomerase and thioredoxins; thioredoxin 156310 5455630 Plav_0139 Parvibaculum lavamentivorans DS-1 thioredoxin YP_001411419.1 155990 D 402881 CDS YP_001411420.1 154250596 5454562 complement(156365..157699) 1 NC_009719.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rsh:Rsph17029_2589 FolC bifunctional protein; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 157699 5454562 Plav_0140 Parvibaculum lavamentivorans DS-1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_001411420.1 156365 R 402881 CDS YP_001411421.1 154250597 5456022 complement(157696..158610) 1 NC_009719.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: rpb:RPB_0633 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta 158610 5456022 Plav_0141 Parvibaculum lavamentivorans DS-1 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_001411421.1 157696 R 402881 CDS YP_001411422.1 154250598 5455203 complement(158621..159460) 1 NC_009719.1 TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; KEGG: rpe:RPE_0455 tryptophan synthase, alpha subunit; tryptophan synthase subunit alpha 159460 5455203 Plav_0142 Parvibaculum lavamentivorans DS-1 tryptophan synthase subunit alpha YP_001411422.1 158621 R 402881 CDS YP_001411423.1 154250599 5455049 complement(159457..160674) 1 NC_009719.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 160674 5455049 Plav_0143 Parvibaculum lavamentivorans DS-1 tryptophan synthase subunit beta YP_001411423.1 159457 R 402881 CDS YP_001411424.1 154250600 5454899 complement(160702..161349) 1 NC_009719.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: rpa:RPA0068 putative N-(5'-phosphoribosyl)anthranilate isomerase; phosphoribosylanthranilate isomerase 161349 5454899 Plav_0144 Parvibaculum lavamentivorans DS-1 phosphoribosylanthranilate isomerase YP_001411424.1 160702 R 402881 CDS YP_001411425.1 154250601 5456419 complement(161354..162055) 1 NC_009719.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: rru:Rru_A3424 orotidine-5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 162055 5456419 Plav_0145 Parvibaculum lavamentivorans DS-1 orotidine 5'-phosphate decarboxylase YP_001411425.1 161354 R 402881 CDS YP_001411426.1 154250602 5454758 complement(162125..162412) 1 NC_009719.1 KEGG: bbt:BBta_0099 putative exported protein of unknown function; hypothetical protein 162412 5454758 Plav_0146 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411426.1 162125 R 402881 CDS YP_001411427.1 154250603 5454050 complement(162448..162780) 1 NC_009719.1 TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: mag:amb4004 bacterial nucleoid DNA-binding protein; integration host factor subunit beta 162780 5454050 Plav_0147 Parvibaculum lavamentivorans DS-1 integration host factor subunit beta YP_001411427.1 162448 R 402881 CDS YP_001411428.1 154250604 5454902 complement(162854..163798) 1 NC_009719.1 TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: rpc:RPC_0396 signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 36K type 163798 5454902 Plav_0148 Parvibaculum lavamentivorans DS-1 signal peptide peptidase SppA, 36K type YP_001411428.1 162854 R 402881 CDS YP_001411429.1 154250605 5455959 complement(163938..165647) 1 NC_009719.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 165647 rpsA 5455959 rpsA Parvibaculum lavamentivorans DS-1 30S ribosomal protein S1 YP_001411429.1 163938 R 402881 CDS YP_001411430.1 154250606 5454709 complement(165844..166497) 1 NC_009719.1 TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: rpa:RPA0063 cytidylate monophosphate kinase; cytidylate kinase 166497 5454709 Plav_0150 Parvibaculum lavamentivorans DS-1 cytidylate kinase YP_001411430.1 165844 R 402881 CDS YP_001411431.1 154250607 5454019 complement(166494..167849) 1 NC_009719.1 TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: rsh:Rsph17029_3277 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 167849 5454019 Plav_0151 Parvibaculum lavamentivorans DS-1 3-phosphoshikimate 1-carboxyvinyltransferase YP_001411431.1 166494 R 402881 CDS YP_001411432.1 154250608 5455114 167971..168447 1 NC_009719.1 KEGG: bov:BOV_0023 hypothetical protein; hypothetical protein 168447 5455114 Plav_0152 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411432.1 167971 D 402881 CDS YP_001411433.1 154250609 5454219 complement(168681..169313) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: pol:Bpro_3836 transcriptional regulator, TetR family; TetR family transcriptional regulator 169313 5454219 Plav_0153 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001411433.1 168681 R 402881 CDS YP_001411434.1 154250610 5455243 169440..171002 1 NC_009719.1 PFAM: AMP-dependent synthetase and ligase; KEGG: msm:MSMEG_4065 feruloyl-CoA synthetase; AMP-dependent synthetase and ligase 171002 5455243 Plav_0154 Parvibaculum lavamentivorans DS-1 AMP-dependent synthetase and ligase YP_001411434.1 169440 D 402881 CDS YP_001411435.1 154250611 5453829 171020..172207 1 NC_009719.1 PFAM: Thiolase; KEGG: rme:Rmet_5826 thiolase; lipid-transfer protein 172207 5453829 Plav_0155 Parvibaculum lavamentivorans DS-1 lipid-transfer protein YP_001411435.1 171020 D 402881 CDS YP_001411436.1 154250612 5454334 172213..172656 1 NC_009719.1 KEGG: rpd:RPD_3813 hypothetical protein; hypothetical protein 172656 5454334 Plav_0156 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411436.1 172213 D 402881 CDS YP_001411437.1 154250613 5454584 172668..173081 1 NC_009719.1 PFAM: MaoC domain protein dehydratase; KEGG: rpa:RPA3303 MaoC-like dehydratase; dehydratase 173081 5454584 Plav_0157 Parvibaculum lavamentivorans DS-1 dehydratase YP_001411437.1 172668 D 402881 CDS YP_001411438.1 154250614 5454088 173099..173929 1 NC_009719.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpb:RPB_4075 3-oxoacyl-acyl carrier protein reductase; short-chain dehydrogenase/reductase SDR 173929 5454088 Plav_0158 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001411438.1 173099 D 402881 CDS YP_001411439.1 154250615 5456503 complement(173954..174976) 1 NC_009719.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: rrs:RoseRS_0979 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 174976 5456503 Plav_0159 Parvibaculum lavamentivorans DS-1 Rieske (2Fe-2S) domain-containing protein YP_001411439.1 173954 R 402881 CDS YP_001411440.1 154250616 5454177 complement(175057..175896) 1 NC_009719.1 PFAM: regulatory protein LuxR; KEGG: pfl:PFL_3468 transcriptional regulator, LuxR family; response regulator receiver protein 175896 5454177 Plav_0160 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001411440.1 175057 R 402881 CDS YP_001411441.1 154250617 5454934 176064..177455 1 NC_009719.1 PFAM: aminotransferase class-III; KEGG: cps:CPS_2054 hypothetical protein; hypothetical protein 177455 5454934 Plav_0161 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411441.1 176064 D 402881 CDS YP_001411442.1 154250618 5454490 177532..179292 1 NC_009719.1 PFAM: protein of unknown function DUF1302; KEGG: azo:azo2254 conserved hypothetical secreted protein; hypothetical protein 179292 5454490 Plav_0162 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411442.1 177532 D 402881 CDS YP_001411443.1 154250619 5454979 179332..180687 1 NC_009719.1 PFAM: protein of unknown function DUF1329; KEGG: reh:H16_A0834 hypothetical protein; hypothetical protein 180687 5454979 Plav_0163 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411443.1 179332 D 402881 CDS YP_001411444.1 154250620 5453575 180800..182044 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: swi:Swit_4805 hypothetical protein; major facilitator superfamily transporter 182044 5453575 Plav_0164 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001411444.1 180800 D 402881 CDS YP_001411445.1 154250621 5453477 complement(182041..183489) 1 NC_009719.1 PFAM: Amidase; KEGG: rsp:RSP_3526 amidase; amidase 183489 5453477 Plav_0165 Parvibaculum lavamentivorans DS-1 amidase YP_001411445.1 182041 R 402881 CDS YP_001411446.1 154250622 5455004 complement(183572..184993) 1 NC_009719.1 PFAM: aldehyde dehydrogenase; KEGG: mlo:mlr6969 aldehyde dehydrogenase; aldehyde dehydrogenase 184993 5455004 Plav_0166 Parvibaculum lavamentivorans DS-1 aldehyde dehydrogenase YP_001411446.1 183572 R 402881 CDS YP_001411447.1 154250623 5453410 185132..186412 1 NC_009719.1 KEGG: nar:Saro_2604 major facilitator superfamily MFS_1; hypothetical protein 186412 5453410 Plav_0167 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411447.1 185132 D 402881 CDS YP_001411448.1 154250624 5453530 complement(186423..187580) 1 NC_009719.1 PFAM: DSBA oxidoreductase; KEGG: sil:SPO1494 2-hydroxychromene-2-carboxylate isomerase, putative; DSBA oxidoreductase 187580 5453530 Plav_0168 Parvibaculum lavamentivorans DS-1 DSBA oxidoreductase YP_001411448.1 186423 R 402881 CDS YP_001411449.1 154250625 5453692 187742..188599 1 NC_009719.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bam:Bamb_4305 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 188599 5453692 Plav_0169 Parvibaculum lavamentivorans DS-1 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_001411449.1 187742 D 402881 CDS YP_001411450.1 154250626 5455122 complement(188602..191808) 1 NC_009719.1 PFAM: acriflavin resistance protein; KEGG: mmr:Mmar10_2625 acriflavin resistance protein; acriflavin resistance protein 191808 5455122 Plav_0170 Parvibaculum lavamentivorans DS-1 acriflavin resistance protein YP_001411450.1 188602 R 402881 CDS YP_001411451.1 154250627 5453495 complement(191805..192941) 1 NC_009719.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mmr:Mmar10_2624 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 192941 5453495 Plav_0171 Parvibaculum lavamentivorans DS-1 RND family efflux transporter MFP subunit YP_001411451.1 191805 R 402881 CDS YP_001411452.1 154250628 5454767 complement(192934..193662) 1 NC_009719.1 PFAM: transcriptional regulator PadR family protein; KEGG: smu:SMU.1604c hypothetical protein; PadR-like family transcriptional regulator 193662 5454767 Plav_0172 Parvibaculum lavamentivorans DS-1 PadR-like family transcriptional regulator YP_001411452.1 192934 R 402881 CDS YP_001411453.1 154250629 5453572 complement(193759..195579) 1 NC_009719.1 KEGG: nha:Nham_2663 hypothetical protein; hypothetical protein 195579 5453572 Plav_0173 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411453.1 193759 R 402881 CDS YP_001411454.1 154250630 5453359 complement(195676..197946) 1 NC_009719.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 197946 fadE 5453359 fadE Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase YP_001411454.1 195676 R 402881 CDS YP_001411455.1 154250631 5453688 complement(197992..201132) 1 NC_009719.1 PFAM: acriflavin resistance protein; KEGG: saz:Sama_1905 AcrB/AcrD/AcrF family protein; acriflavin resistance protein 201132 5453688 Plav_0175 Parvibaculum lavamentivorans DS-1 acriflavin resistance protein YP_001411455.1 197992 R 402881 CDS YP_001411456.1 154250632 5453345 complement(201148..202209) 1 NC_009719.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: csa:Csal_1440 secretion protein HlyD; RND family efflux transporter MFP subunit 202209 5453345 Plav_0176 Parvibaculum lavamentivorans DS-1 RND family efflux transporter MFP subunit YP_001411456.1 201148 R 402881 CDS YP_001411457.1 154250633 5455436 complement(202344..204005) 1 NC_009719.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dar:Daro_1198 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 204005 5455436 Plav_0177 Parvibaculum lavamentivorans DS-1 binding-protein-dependent transport system inner membrane protein YP_001411457.1 202344 R 402881 CDS YP_001411458.1 154250634 5454848 204154..205194 1 NC_009719.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rru:Rru_A0767 ABC transporter component; ABC transporter-like protein 205194 5454848 Plav_0178 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001411458.1 204154 D 402881 CDS YP_001411459.1 154250635 5456636 205288..206313 1 NC_009719.1 PFAM: extracellular solute-binding protein family 1; KEGG: csa:Csal_0549 extracellular solute-binding protein, family 1; extracellular solute-binding protein 206313 5456636 Plav_0179 Parvibaculum lavamentivorans DS-1 extracellular solute-binding protein YP_001411459.1 205288 D 402881 CDS YP_001411460.1 154250636 5454589 complement(206432..207214) 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gvi:gll0578 hemin ABC transporter ATP binding protein; ABC transporter-like protein 207214 5454589 Plav_0180 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001411460.1 206432 R 402881 CDS YP_001411461.1 154250637 5455643 complement(207211..208266) 1 NC_009719.1 PFAM: transport system permease protein; KEGG: jan:Jann_2135 transport system permease protein; transport system permease 208266 5455643 Plav_0181 Parvibaculum lavamentivorans DS-1 transport system permease YP_001411461.1 207211 R 402881 CDS YP_001411462.1 154250638 5453632 complement(208263..209153) 1 NC_009719.1 PFAM: periplasmic binding protein; KEGG: gvi:gll0580 hemin-binding periplasmic protein; periplasmic-binding protein 209153 5453632 Plav_0182 Parvibaculum lavamentivorans DS-1 periplasmic-binding protein YP_001411462.1 208263 R 402881 CDS YP_001411463.1 154250639 5456335 complement(209150..210202) 1 NC_009719.1 PFAM: Haemin-degrading family protein; KEGG: mxa:MXAN_1318 hemin transport protein HemS; hemin-degrading family protein 210202 5456335 Plav_0183 Parvibaculum lavamentivorans DS-1 hemin-degrading family protein YP_001411463.1 209150 R 402881 CDS YP_001411464.1 154250640 5453869 complement(210225..211028) 1 NC_009719.1 TIGRFAM: TonB family protein; KEGG: psb:Psyr_4480 TonB, C-terminal; TonB family protein 211028 5453869 Plav_0184 Parvibaculum lavamentivorans DS-1 TonB family protein YP_001411464.1 210225 R 402881 CDS YP_001411465.1 154250641 5455331 complement(211043..213229) 1 NC_009719.1 TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ana:alr2153 outer membrane heme receptor; TonB-dependent hemoglobin/transferrin/lactoferrin family receptor 213229 5455331 Plav_0185 Parvibaculum lavamentivorans DS-1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor YP_001411465.1 211043 R 402881 CDS YP_001411466.1 154250642 5454301 complement(213349..213591) 1 NC_009719.1 hypothetical protein 213591 5454301 Plav_0186 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411466.1 213349 R 402881 CDS YP_001411467.1 154250643 5456623 complement(213717..214331) 1 NC_009719.1 PFAM: manganese and iron superoxide dismutase; KEGG: mmr:Mmar10_1895 superoxide dismutase; superoxide dismutase 214331 5456623 Plav_0187 Parvibaculum lavamentivorans DS-1 superoxide dismutase YP_001411467.1 213717 R 402881 CDS YP_001411468.1 154250644 5453625 214551..214997 1 NC_009719.1 PFAM: heat shock protein Hsp20; KEGG: rpa:RPA0054 putative small heat shock protein; heat shock protein Hsp20 214997 5453625 Plav_0188 Parvibaculum lavamentivorans DS-1 heat shock protein Hsp20 YP_001411468.1 214551 D 402881 CDS YP_001411469.1 154250645 5455071 215062..215361 1 NC_009719.1 PFAM: protein of unknown function DUF1150; KEGG: hypothetical protein; hypothetical protein 215361 5455071 Plav_0189 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411469.1 215062 D 402881 CDS YP_001411470.1 154250646 5454595 complement(215436..215900) 1 NC_009719.1 TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: rru:Rru_A0009 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 215900 5454595 Plav_0190 Parvibaculum lavamentivorans DS-1 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_001411470.1 215436 R 402881 CDS YP_001411471.1 154250647 5453589 complement(216028..216609) 1 NC_009719.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: hne:HNE_3290 hypothetical protein; sigma 54 modulation protein/ribosomal protein S30EA 216609 5453589 Plav_0191 Parvibaculum lavamentivorans DS-1 sigma 54 modulation protein/ribosomal protein S30EA YP_001411471.1 216028 R 402881 CDS YP_001411472.1 154250648 5455025 complement(216945..218492) 1 NC_009719.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: bbt:BBta_0121 RNA polymerase sigma-54 factor; RNA polymerase sigma-54 subunit RpoN 218492 5455025 Plav_0192 Parvibaculum lavamentivorans DS-1 RNA polymerase sigma-54 subunit RpoN YP_001411472.1 216945 R 402881 CDS YP_001411473.1 154250649 5455756 complement(218521..219324) 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb3936 ABC-type (unclassified) transport system, ATPase component; ABC transporter-like protein 219324 5455756 Plav_0193 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001411473.1 218521 R 402881 CDS YP_001411474.1 154250650 5454299 complement(219416..220009) 1 NC_009719.1 TIGRFAM: Cell envelope biogenesis YhbN; PFAM: OstA family protein; KEGG: rpa:RPA0048 hypothetical protein; cell envelope biogenesis YhbN 220009 5454299 Plav_0194 Parvibaculum lavamentivorans DS-1 cell envelope biogenesis YhbN YP_001411474.1 219416 R 402881 CDS YP_001411475.1 154250651 5456161 complement(220006..220725) 1 NC_009719.1 PFAM: protein of unknown function DUF1239; KEGG: bja:blr0720 hypothetical protein; hypothetical protein 220725 5456161 Plav_0195 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411475.1 220006 R 402881 CDS YP_001411476.1 154250652 5454909 complement(220820..221431) 1 NC_009719.1 PFAM: 3'-5' exonuclease; KEGG: rpb:RPB_0659 3'-5' exonuclease; 3'-5' exonuclease 221431 5454909 Plav_0196 Parvibaculum lavamentivorans DS-1 3'-5' exonuclease YP_001411476.1 220820 R 402881 CDS YP_001411477.1 154250653 5453834 221783..222748 1 NC_009719.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: rpe:RPE_0505 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 222748 5453834 Plav_0197 Parvibaculum lavamentivorans DS-1 NAD-dependent epimerase/dehydratase YP_001411477.1 221783 D 402881 CDS YP_001411478.1 154250654 5454508 222759..223172 1 NC_009719.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bmb:BruAb1_0216 transcriptional regulator, MerR family; MerR family transcriptional regulator 223172 5454508 Plav_0198 Parvibaculum lavamentivorans DS-1 MerR family transcriptional regulator YP_001411478.1 222759 D 402881 CDS YP_001411479.1 154250655 5454894 223185..223865 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: mag:amb3942 glutathione S-transferase; glutathione S-transferase domain-containing protein 223865 5454894 Plav_0199 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001411479.1 223185 D 402881 CDS YP_001411480.1 154250656 5455133 223846..224997 1 NC_009719.1 PFAM: HEAT domain containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: mlo:mlr4636 iron-sulfur cluster binding protein; hypothetical protein 224997 5455133 Plav_0200 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411480.1 223846 D 402881 CDS YP_001411481.1 154250657 5455604 complement(224982..225737) 1 NC_009719.1 SMART: Tetratricopeptide domain protein; KEGG: gbe:GbCGDNIH1_0706 tetratricopeptide repeat family protein; hypothetical protein 225737 5455604 Plav_0201 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411481.1 224982 R 402881 CDS YP_001411482.1 154250658 5454115 225795..226670 1 NC_009719.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rsq:Rsph17025_2793 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 226670 5454115 Plav_0202 Parvibaculum lavamentivorans DS-1 NAD-dependent epimerase/dehydratase YP_001411482.1 225795 D 402881 CDS YP_001411483.1 154250659 5456836 226742..227140 1 NC_009719.1 KEGG: rpc:RPC_3825 hypothetical protein; hypothetical protein 227140 5456836 Plav_0203 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411483.1 226742 D 402881 CDS YP_001411484.1 154250660 5456893 complement(227205..227999) 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: rpb:RPB_0067 hypothetical protein; alpha/beta hydrolase fold protein 227999 5456893 Plav_0204 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001411484.1 227205 R 402881 CDS YP_001411485.1 154250661 5453854 228094..229233 1 NC_009719.1 PFAM: glycosyl transferase group 1; KEGG: hne:HNE_0425 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 229233 5453854 Plav_0205 Parvibaculum lavamentivorans DS-1 group 1 glycosyl transferase YP_001411485.1 228094 D 402881 CDS YP_001411486.1 154250662 5453571 229230..229589 1 NC_009719.1 hypothetical protein 229589 5453571 Plav_0206 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411486.1 229230 D 402881 CDS YP_001411487.1 154250663 5456110 229721..230242 1 NC_009719.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: translation initiation factor IF-3; K02520 translation initiation factor IF-3; translation initiation factor IF-3 230242 5456110 Plav_0207 Parvibaculum lavamentivorans DS-1 translation initiation factor IF-3 YP_001411487.1 229721 D 402881 CDS YP_001411488.1 154250664 5455180 complement(230295..231251) 1 NC_009719.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: acr:Acry_0560 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 231251 5455180 Plav_0208 Parvibaculum lavamentivorans DS-1 glycerophosphoryl diester phosphodiesterase YP_001411488.1 230295 R 402881 CDS YP_001411489.1 154250665 5456463 231520..231786 1 NC_009719.1 hypothetical protein 231786 5456463 Plav_0209 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411489.1 231520 D 402881 CDS YP_001411490.1 154250666 5454736 231981..233228 1 NC_009719.1 PFAM: luciferase family protein; KEGG: bja:bll7033 LuxA-like protein; luciferase family protein 233228 5454736 Plav_0210 Parvibaculum lavamentivorans DS-1 luciferase family protein YP_001411490.1 231981 D 402881 CDS YP_001411491.1 154250667 5454271 233311..233748 1 NC_009719.1 PFAM: regulatory protein MarR; KEGG: ade:Adeh_2919 transcriptional regulator, MarR family; MarR family transcriptional regulator 233748 5454271 Plav_0211 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001411491.1 233311 D 402881 CDS YP_001411492.1 154250668 5454552 233775..234722 1 NC_009719.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: rpa:RPA0441 hypothetical protein; phytanoyl-CoA dioxygenase 234722 5454552 Plav_0212 Parvibaculum lavamentivorans DS-1 phytanoyl-CoA dioxygenase YP_001411492.1 233775 D 402881 CDS YP_001411493.1 154250669 5453592 234779..235216 1 NC_009719.1 hypothetical protein 235216 5453592 Plav_0213 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411493.1 234779 D 402881 CDS YP_001411494.1 154250670 5455142 235266..235808 1 NC_009719.1 KEGG: swi:Swit_4579 hypothetical protein; hypothetical protein 235808 5455142 Plav_0214 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411494.1 235266 D 402881 CDS YP_001411495.1 154250671 5456135 complement(235830..236357) 1 NC_009719.1 KEGG: bja:bll2250 hypothetical protein; hypothetical protein 236357 5456135 Plav_0215 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411495.1 235830 R 402881 CDS YP_001411496.1 154250672 5455056 complement(236368..236616) 1 NC_009719.1 KEGG: gur:Gura_1251 hypothetical protein; hypothetical protein 236616 5455056 Plav_0216 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411496.1 236368 R 402881 CDS YP_001411497.1 154250673 5455608 complement(236697..236924) 1 NC_009719.1 PFAM: Post-segregation antitoxin CcdA; KEGG: gur:Gura_1252 post-segregation antitoxin CcdA; post-segregation antitoxin CcdA 236924 5455608 Plav_0217 Parvibaculum lavamentivorans DS-1 post-segregation antitoxin CcdA YP_001411497.1 236697 R 402881 CDS YP_001411498.1 154250674 5454255 237153..237353 1 NC_009719.1 PFAM: ribosomal protein L35; KEGG: ret:RHE_CH00261 50S ribosomal protein L35; 50S ribosomal protein L35 237353 5454255 Plav_0218 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L35 YP_001411498.1 237153 D 402881 CDS YP_001411499.1 154250675 5456127 237383..237739 1 NC_009719.1 TIGRFAM: ribosomal protein L20; KEGG: mes:Meso_0674 ribosomal protein L20; 50S ribosomal protein L20 237739 5456127 Plav_0219 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L20 YP_001411499.1 237383 D 402881 CDS YP_001411500.1 154250676 5453456 237954..239039 1 NC_009719.1 TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; KEGG: nwi:Nwi_0066 phenylalanyl-tRNA synthetase, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 239039 5453456 Plav_0220 Parvibaculum lavamentivorans DS-1 phenylalanyl-tRNA synthetase subunit alpha YP_001411500.1 237954 D 402881 CDS YP_001411501.1 154250677 5454117 239036..241474 1 NC_009719.1 TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: mes:Meso_0677 phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta 241474 5454117 Plav_0221 Parvibaculum lavamentivorans DS-1 phenylalanyl-tRNA synthetase subunit beta YP_001411501.1 239036 D 402881 CDS YP_001411502.1 154250678 5454455 241504..242328 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reh:H16_B1741 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 242328 5454455 Plav_0222 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001411502.1 241504 D 402881 CDS YP_001411503.1 154250679 5455311 242368..244206 1 NC_009719.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 244206 5455311 Plav_0223 Parvibaculum lavamentivorans DS-1 GTP-binding protein LepA YP_001411503.1 242368 D 402881 CDS YP_001411504.1 154250680 5454511 complement(244284..244580) 1 NC_009719.1 KEGG: rpb:RPB_4710 hypothetical protein; hypothetical protein 244580 5454511 Plav_0224 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411504.1 244284 R 402881 CDS YP_001411505.1 154250681 5455100 complement(245052..245615) 1 NC_009719.1 PFAM: TadE family protein; KEGG: hne:HNE_3020 Flp/Fap pilin component; TadE family protein 245615 5455100 Plav_0225 Parvibaculum lavamentivorans DS-1 TadE family protein YP_001411505.1 245052 R 402881 CDS YP_001411506.1 154250682 5453412 complement(245627..246178) 1 NC_009719.1 PFAM: TadE family protein; KEGG: mmr:Mmar10_0414 TadE family protein; TadE family protein 246178 5453412 Plav_0226 Parvibaculum lavamentivorans DS-1 TadE family protein YP_001411506.1 245627 R 402881 CDS YP_001411507.1 154250683 5455977 246392..247702 1 NC_009719.1 PFAM: von Willebrand factor type A; KEGG: rpa:RPA3149 hypothetical protein; von Willebrand factor type A 247702 5455977 Plav_0227 Parvibaculum lavamentivorans DS-1 von Willebrand factor type A YP_001411507.1 246392 D 402881 CDS YP_001411508.1 154250684 5455043 complement(247769..248287) 1 NC_009719.1 KEGG: bja:blr1444 hypothetical protein; hypothetical protein 248287 5455043 Plav_0228 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411508.1 247769 R 402881 CDS YP_001411509.1 154250685 5456364 248459..249211 1 NC_009719.1 PFAM: cyclic nucleotide-binding; KEGG: mag:amb3736 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; cyclic nucleotide-binding protein 249211 5456364 Plav_0229 Parvibaculum lavamentivorans DS-1 cyclic nucleotide-binding protein YP_001411509.1 248459 D 402881 CDS YP_001411510.1 154250686 5453847 249631..249795 1 NC_009719.1 PFAM: Flp/Fap pilin component; KEGG: bja:bsl7141 components of type IV pilus pilin subunit; Flp/Fap pilin component 249795 5453847 Plav_0230 Parvibaculum lavamentivorans DS-1 Flp/Fap pilin component YP_001411510.1 249631 D 402881 CDS YP_001411511.1 154250687 5455295 249995..250558 1 NC_009719.1 PFAM: peptidase A24A prepilin type IV; KEGG: rpa:RPA3676 putative type IV prepilin peptidase, cpaA; peptidase A24A prepilin type IV 250558 5455295 Plav_0231 Parvibaculum lavamentivorans DS-1 peptidase A24A prepilin type IV YP_001411511.1 249995 D 402881 CDS YP_001411512.1 154250688 5453818 250575..251327 1 NC_009719.1 PFAM: SAF domain protein; KEGG: rpd:RPD_3519 Flp pilus assembly CpaB; SAF domain-containing protein 251327 5453818 Plav_0232 Parvibaculum lavamentivorans DS-1 SAF domain-containing protein YP_001411512.1 250575 D 402881 CDS YP_001411513.1 154250689 5456118 251352..252827 1 NC_009719.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: mmr:Mmar10_0419 type II and III secretion system protein; type II and III secretion system protein 252827 5456118 Plav_0233 Parvibaculum lavamentivorans DS-1 type II and III secretion system protein YP_001411513.1 251352 D 402881 CDS YP_001411514.1 154250690 5453602 252838..253542 1 NC_009719.1 TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; KEGG: ret:RHE_CH00206 pilus assembly protein; pilus biogenesis lipoprotein CpaD 253542 5453602 Plav_0234 Parvibaculum lavamentivorans DS-1 pilus biogenesis lipoprotein CpaD YP_001411514.1 252838 D 402881 CDS YP_001411515.1 154250691 5454512 253542..254855 1 NC_009719.1 KEGG: mmr:Mmar10_0421 response regulator receiver protein; response regulator receiver protein 254855 5454512 Plav_0235 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001411515.1 253542 D 402881 CDS YP_001411516.1 154250692 5454703 254871..256319 1 NC_009719.1 PFAM: type II secretion system protein E; KEGG: rpb:RPB_1781 type II secretion system protein E; type II secretion system protein E 256319 5454703 Plav_0236 Parvibaculum lavamentivorans DS-1 type II secretion system protein E YP_001411516.1 254871 D 402881 CDS YP_001411517.1 154250693 5456393 256340..257326 1 NC_009719.1 PFAM: type II secretion system protein; KEGG: rpc:RPC_3717 type II secretion system protein; type II secretion system protein 257326 5456393 Plav_0237 Parvibaculum lavamentivorans DS-1 type II secretion system protein YP_001411517.1 256340 D 402881 CDS YP_001411518.1 154250694 5454459 257341..258309 1 NC_009719.1 PFAM: type II secretion system protein; KEGG: mmr:Mmar10_0424 type II secretion system protein; type II secretion system protein 258309 5454459 Plav_0238 Parvibaculum lavamentivorans DS-1 type II secretion system protein YP_001411518.1 257341 D 402881 CDS YP_001411519.1 154250695 5455084 complement(258408..259388) 1 NC_009719.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rle:RL0221 hypothetical protein atu0215 (agr_c_369p); hypothetical protein 259388 5455084 Plav_0239 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411519.1 258408 R 402881 CDS YP_001411520.1 154250696 5455212 259556..260686 1 NC_009719.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: mag:amb4102 TRAP-type uncharacterized transport system, periplasmic component; TRAP transporter solute receptor TAXI family protein 260686 5455212 Plav_0240 Parvibaculum lavamentivorans DS-1 TRAP transporter solute receptor TAXI family protein YP_001411520.1 259556 D 402881 CDS YP_001411521.1 154250697 5453702 complement(260683..261366) 1 NC_009719.1 KEGG: bte:BTH_I0235 glutathione S-transferase, N-terminal domain protein; glutathione S-transferase domain-containing protein 261366 5453702 Plav_0241 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001411521.1 260683 R 402881 CDS YP_001411522.1 154250698 5454669 261472..262848 1 NC_009719.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bov:BOV_2093 cytosol aminopeptidase family protein; leucyl aminopeptidase 262848 5454669 Plav_0242 Parvibaculum lavamentivorans DS-1 leucyl aminopeptidase YP_001411522.1 261472 D 402881 CDS YP_001411523.1 154250699 5454688 262935..263306 1 NC_009719.1 PFAM: regulatory protein MarR; KEGG: mag:amb4246 transcriptional regulator; MarR family transcriptional regulator 263306 5454688 Plav_0243 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001411523.1 262935 D 402881 CDS YP_001411524.1 154250700 5454235 263303..264172 1 NC_009719.1 PFAM: NLP/P60 protein; KEGG: rpd:RPD_3528 NLP/P60; NLP/P60 protein 264172 5454235 Plav_0244 Parvibaculum lavamentivorans DS-1 NLP/P60 protein YP_001411524.1 263303 D 402881 CDS YP_001411525.1 154250701 5454567 complement(264173..265801) 1 NC_009719.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: mes:Meso_4080 ABC transporter related; ABC transporter-like protein 265801 5454567 Plav_0245 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001411525.1 264173 R 402881 CDS YP_001411526.1 154250702 5453553 complement(265798..266865) 1 NC_009719.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_7052 putative oligopeptide transport protein (ABC superfamily, membrane); binding-protein-dependent transport system inner membrane protein 266865 5453553 Plav_0246 Parvibaculum lavamentivorans DS-1 binding-protein-dependent transport system inner membrane protein YP_001411526.1 265798 R 402881 CDS YP_001411527.1 154250703 5456157 complement(266869..267978) 1 NC_009719.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nwi:Nwi_0290 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 267978 5456157 Plav_0247 Parvibaculum lavamentivorans DS-1 binding-protein-dependent transport system inner membrane protein YP_001411527.1 266869 R 402881 CDS YP_001411528.1 154250704 5454630 complement(267984..269864) 1 NC_009719.1 PFAM: extracellular solute-binding protein family 5; KEGG: rpe:RPE_3766 extracellular solute-binding protein, family 5; extracellular solute-binding protein 269864 5454630 Plav_0248 Parvibaculum lavamentivorans DS-1 extracellular solute-binding protein YP_001411528.1 267984 R 402881 CDS YP_001411529.1 154250705 5453730 complement(269861..271873) 1 NC_009719.1 PFAM: extracellular solute-binding protein family 5; KEGG: nwi:Nwi_0288 extracellular solute-binding protein, family 5; extracellular solute-binding protein 271873 5453730 Plav_0249 Parvibaculum lavamentivorans DS-1 extracellular solute-binding protein YP_001411529.1 269861 R 402881 CDS YP_001411530.1 154250706 5453360 complement(272074..272736) 1 NC_009719.1 PFAM: cytochrome c class I; KEGG: rpd:RPD_3536 cytochrome c, class I; cytochrome c class I 272736 5453360 Plav_0250 Parvibaculum lavamentivorans DS-1 cytochrome c class I YP_001411530.1 272074 R 402881 CDS YP_001411531.1 154250707 5455077 273044..273820 1 NC_009719.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 273820 5455077 Plav_0251 Parvibaculum lavamentivorans DS-1 3-deoxy-manno-octulosonate cytidylyltransferase YP_001411531.1 273044 D 402881 CDS YP_001411532.1 154250708 5453380 273820..274701 1 NC_009719.1 PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: bbt:BBta_7058 chorismate mutase/prephenate dehydratase; prephenate dehydratase 274701 5453380 Plav_0252 Parvibaculum lavamentivorans DS-1 prephenate dehydratase YP_001411532.1 273820 D 402881 CDS YP_001411533.1 154250709 5456953 274841..275527 1 NC_009719.1 hypothetical protein 275527 5456953 Plav_0253 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411533.1 274841 D 402881 CDS YP_001411534.1 154250710 5454007 complement(275537..276496) 1 NC_009719.1 PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; KEGG: MutT/NUDIX family protein; NUDIX hydrolase 276496 5454007 Plav_0254 Parvibaculum lavamentivorans DS-1 NUDIX hydrolase YP_001411534.1 275537 R 402881 CDS YP_001411535.1 154250711 5455242 276779..278650 1 NC_009719.1 KEGG: nha:Nham_0462 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 278650 5455242 Plav_0255 Parvibaculum lavamentivorans DS-1 DNA polymerase III subunits gamma and tau YP_001411535.1 276779 D 402881 CDS YP_001411536.1 154250712 5453915 278656..278964 1 NC_009719.1 PFAM: conserved hypothetical protein; KEGG: rpb:RPB_0667 hypothetical protein; hypothetical protein 278964 5453915 Plav_0256 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411536.1 278656 D 402881 CDS YP_001411537.1 154250713 5455359 278970..279917 1 NC_009719.1 KEGG: pfo:Pfl_3049 hypothetical protein; hypothetical protein 279917 5455359 Plav_0257 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411537.1 278970 D 402881 CDS YP_001411538.1 154250714 5453841 279953..280552 1 NC_009719.1 TIGRFAM: recombination protein RecR; PFAM: RecR protein; TOPRIM domain protein; KEGG: mlo:mlr5510 recombination protein recR; recombination protein RecR 280552 5453841 Plav_0258 Parvibaculum lavamentivorans DS-1 recombination protein RecR YP_001411538.1 279953 D 402881 CDS YP_001411539.1 154250715 5456603 complement(280559..281899) 1 NC_009719.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: maq:Maqu_0255 amino acid carrier protein; amino acid carrier protein 281899 5456603 Plav_0259 Parvibaculum lavamentivorans DS-1 amino acid carrier protein YP_001411539.1 280559 R 402881 CDS YP_001411540.1 154250716 5455040 complement(282024..283124) 1 NC_009719.1 PFAM: protein of unknown function DUF195; KEGG: rru:Rru_A3348 protein of unknown function DUF195; hypothetical protein 283124 5455040 Plav_0260 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411540.1 282024 R 402881 CDS YP_001411541.1 154250717 5454646 283265..283786 1 NC_009719.1 TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; KEGG: hne:HNE_0512 peptide deformylase; peptide deformylase 283786 5454646 Plav_0261 Parvibaculum lavamentivorans DS-1 peptide deformylase YP_001411541.1 283265 D 402881 CDS YP_001411542.1 154250718 5453839 283783..284715 1 NC_009719.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: bmb:BruAb2_0974 Fmt, methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 284715 5453839 Plav_0262 Parvibaculum lavamentivorans DS-1 methionyl-tRNA formyltransferase YP_001411542.1 283783 D 402881 CDS YP_001411543.1 154250719 5454733 284715..285455 1 NC_009719.1 TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; KEGG: nwi:Nwi_3066 tRNA pseudouridine synthase A; tRNA pseudouridine synthase A 285455 5454733 Plav_0263 Parvibaculum lavamentivorans DS-1 tRNA pseudouridine synthase A YP_001411543.1 284715 D 402881 CDS YP_001411544.1 154250720 5453683 complement(285462..286292) 1 NC_009719.1 TIGRFAM: glutamate racemase; PFAM: Asp/Glu racemase; KEGG: dde:Dde_2743 glutamate racemase; glutamate racemase 286292 5453683 Plav_0264 Parvibaculum lavamentivorans DS-1 glutamate racemase YP_001411544.1 285462 R 402881 CDS YP_001411545.1 154250721 5455312 complement(286289..286897) 1 NC_009719.1 KEGG: rru:Rru_A3481 hypothetical protein; hypothetical protein 286897 5455312 Plav_0265 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411545.1 286289 R 402881 CDS YP_001411546.1 154250722 5454257 complement(286894..288081) 1 NC_009719.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 288081 5454257 Plav_0266 Parvibaculum lavamentivorans DS-1 succinyl-diaminopimelate desuccinylase YP_001411546.1 286894 R 402881 CDS YP_001411547.1 154250723 5456245 complement(288126..288971) 1 NC_009719.1 TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: atc:AGR_C_648 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 288971 5456245 Plav_0267 Parvibaculum lavamentivorans DS-1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_001411547.1 288126 R 402881 CDS YP_001411548.1 154250724 5454275 complement(289073..290365) 1 NC_009719.1 PFAM: EAL domain protein; KEGG: hypothetical protein; diguanylate phosphodiesterase 290365 5454275 Plav_0268 Parvibaculum lavamentivorans DS-1 diguanylate phosphodiesterase YP_001411548.1 289073 R 402881 CDS YP_001411549.1 154250725 5455614 complement(290477..291856) 1 NC_009719.1 PFAM: peptidase U34 dipeptidase; KEGG: nca:Noca_0390 peptidase U34, dipeptidase; peptidase U34 dipeptidase 291856 5455614 Plav_0269 Parvibaculum lavamentivorans DS-1 peptidase U34 dipeptidase YP_001411549.1 290477 R 402881 CDS YP_001411550.1 154250726 5454691 291932..292408 1 NC_009719.1 PFAM: glutathione peroxidase; KEGG: rru:Rru_A1863 glutathione peroxidase; glutathione peroxidase 292408 5454691 Plav_0270 Parvibaculum lavamentivorans DS-1 glutathione peroxidase YP_001411550.1 291932 D 402881 CDS YP_001411551.1 154250727 5454089 292405..292905 1 NC_009719.1 PFAM: DinB family protein; KEGG: acr:Acry_1562 DinB family protein; DinB family protein 292905 5454089 Plav_0271 Parvibaculum lavamentivorans DS-1 DinB family protein YP_001411551.1 292405 D 402881 CDS YP_001411552.1 154250728 5454602 complement(292958..293632) 1 NC_009719.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: mes:Meso_1262 OmpA/MotB; OmpA/MotB domain-containing protein 293632 5454602 Plav_0272 Parvibaculum lavamentivorans DS-1 OmpA/MotB domain-containing protein YP_001411552.1 292958 R 402881 CDS YP_001411553.1 154250729 5456553 293858..294622 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpd:RPD_3206 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 294622 5456553 Plav_0273 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001411553.1 293858 D 402881 CDS YP_001411554.1 154250730 5454378 294628..295077 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rru:Rru_A3458 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 295077 5454378 Plav_0274 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001411554.1 294628 D 402881 CDS YP_001411555.1 154250731 5454916 295124..295975 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 295975 5454916 Plav_0275 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001411555.1 295124 D 402881 CDS YP_001411556.1 154250732 5453796 296086..297411 1 NC_009719.1 PFAM: beta-lactamase domain protein; KEGG: reu:Reut_C6079 beta-lactamase-like; beta-lactamase domain-containing protein 297411 5453796 Plav_0276 Parvibaculum lavamentivorans DS-1 beta-lactamase domain-containing protein YP_001411556.1 296086 D 402881 CDS YP_001411557.1 154250733 5453759 complement(297620..298234) 1 NC_009719.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: csa:Csal_2087 transcriptional regulator, XRE family with cupin sensor protein; XRE family transcriptional regulator 298234 5453759 Plav_0277 Parvibaculum lavamentivorans DS-1 XRE family transcriptional regulator YP_001411557.1 297620 R 402881 CDS YP_001411558.1 154250734 5454694 298339..299667 1 NC_009719.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 299667 5454694 Plav_0278 Parvibaculum lavamentivorans DS-1 beta alanine--pyruvate transaminase YP_001411558.1 298339 D 402881 CDS YP_001411559.1 154250735 5456109 299996..301777 1 NC_009719.1 hypothetical protein 301777 5456109 Plav_0279 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411559.1 299996 D 402881 CDS YP_001411560.1 154250736 5453445 complement(302132..302659) 1 NC_009719.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: swi:Swit_1041 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 302659 5453445 Plav_0280 Parvibaculum lavamentivorans DS-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001411560.1 302132 R 402881 CDS YP_001411561.1 154250737 5456285 complement(302663..303307) 1 NC_009719.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: hypothetical protein; carboxymuconolactone decarboxylase 303307 5456285 Plav_0281 Parvibaculum lavamentivorans DS-1 carboxymuconolactone decarboxylase YP_001411561.1 302663 R 402881 CDS YP_001411562.1 154250738 5453366 303378..303851 1 NC_009719.1 PFAM: regulatory protein MarR; KEGG: sal:Sala_1768 transcriptional regulator, MarR family; MarR family transcriptional regulator 303851 5453366 Plav_0282 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001411562.1 303378 D 402881 CDS YP_001411563.1 154250739 5453752 303848..304717 1 NC_009719.1 KEGG: ava:Ava_4757 putative methylisocitrate lyase; putative methylisocitrate lyase 304717 5453752 Plav_0283 Parvibaculum lavamentivorans DS-1 putative methylisocitrate lyase YP_001411563.1 303848 D 402881 CDS YP_001411564.1 154250740 5453669 304729..305157 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: hne:HNE_0832 thioesterase family protein; thioesterase superfamily protein 305157 5453669 Plav_0284 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001411564.1 304729 D 402881 CDS YP_001411565.1 154250741 5455238 305237..305524 1 NC_009719.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: rpe:RPE_2281 excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C 305524 5455238 Plav_0285 Parvibaculum lavamentivorans DS-1 excinuclease ABC subunit C YP_001411565.1 305237 D 402881 CDS YP_001411566.1 154250742 5453391 complement(305607..306377) 1 NC_009719.1 PFAM: extracellular solute-binding protein family 3; KEGG: pau:PA14_19140 cyclohexadienyl dehydratase; prephenate dehydratase 306377 5453391 Plav_0286 Parvibaculum lavamentivorans DS-1 prephenate dehydratase YP_001411566.1 305607 R 402881 CDS YP_001411567.1 154250743 5453642 306628..309525 1 NC_009719.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: pde:Pden_3612 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 309525 5453642 Plav_0287 Parvibaculum lavamentivorans DS-1 isoleucyl-tRNA synthetase YP_001411567.1 306628 D 402881 CDS YP_001411568.1 154250744 5453840 309547..310101 1 NC_009719.1 TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: rpb:RPB_4181 lipoprotein signal peptidase; lipoprotein signal peptidase 310101 5453840 Plav_0288 Parvibaculum lavamentivorans DS-1 lipoprotein signal peptidase YP_001411568.1 309547 D 402881 CDS YP_001411569.1 154250745 5454999 310149..310751 1 NC_009719.1 KEGG: rru:Rru_A2968 hypothetical protein; hypothetical protein 310751 5454999 Plav_0289 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411569.1 310149 D 402881 CDS YP_001411570.1 154250746 5455076 310862..312232 1 NC_009719.1 PFAM: peptidase M16 domain protein; KEGG: rru:Rru_A2972 peptidase M16-like; peptidase M16 domain-containing protein 312232 5455076 Plav_0290 Parvibaculum lavamentivorans DS-1 peptidase M16 domain-containing protein YP_001411570.1 310862 D 402881 CDS YP_001411571.1 154250747 5454309 312229..313623 1 NC_009719.1 PFAM: peptidase M16 domain protein; KEGG: mag:amb0838 predicted Zn-dependent peptidase; peptidase M16 domain-containing protein 313623 5454309 Plav_0291 Parvibaculum lavamentivorans DS-1 peptidase M16 domain-containing protein YP_001411571.1 312229 D 402881 CDS YP_001411572.1 154250748 5453832 313732..315066 1 NC_009719.1 PFAM: phosphoglucose isomerase (PGI); KEGG: rxy:Rxyl_2677 glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 315066 5453832 Plav_0292 Parvibaculum lavamentivorans DS-1 glucose-6-phosphate isomerase YP_001411572.1 313732 D 402881 CDS YP_001411573.1 154250749 5453660 315074..316882 1 NC_009719.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 316882 mutL 5453660 mutL Parvibaculum lavamentivorans DS-1 DNA mismatch repair protein YP_001411573.1 315074 D 402881 CDS YP_001411574.1 154250750 5454394 complement(316865..317611) 1 NC_009719.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: nwi:Nwi_3070 pyrimidine 5-nucleotidase; pyrimidine 5'-nucleotidase 317611 5454394 Plav_0294 Parvibaculum lavamentivorans DS-1 pyrimidine 5'-nucleotidase YP_001411574.1 316865 R 402881 CDS YP_001411575.1 154250751 5454272 317700..319034 1 NC_009719.1 KEGG: mag:amb3893 hypothetical protein; hypothetical protein 319034 5454272 Plav_0295 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411575.1 317700 D 402881 CDS YP_001411576.1 154250752 5454244 complement(319031..320032) 1 NC_009719.1 PFAM: Peptidoglycan-binding domain 1 protein; protein of unknown function DUF1036; KEGG: bja:blr8102 hypothetical protein; hypothetical protein 320032 5454244 Plav_0296 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411576.1 319031 R 402881 CDS YP_001411577.1 154250753 5455607 complement(320114..321028) 1 NC_009719.1 TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: mlo:mlr4826 acetylglutamate kinase; acetylglutamate kinase 321028 5455607 Plav_0297 Parvibaculum lavamentivorans DS-1 acetylglutamate kinase YP_001411577.1 320114 R 402881 CDS YP_001411578.1 154250754 5453385 complement(321069..321776) 1 NC_009719.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 321776 engB 5453385 engB Parvibaculum lavamentivorans DS-1 ribosome biogenesis GTP-binding protein YsxC YP_001411578.1 321069 R 402881 CDS YP_001411579.1 154250755 5455074 complement(321781..323610) 1 NC_009719.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: rpa:RPA0632 60 kDa inner membrane protein; 60 kDa inner membrane insertion protein 323610 5455074 Plav_0299 Parvibaculum lavamentivorans DS-1 60 kDa inner membrane insertion protein YP_001411579.1 321781 R 402881 CDS YP_001411580.1 154250756 5454611 complement(323603..324007) 1 NC_009719.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: ribonuclease P protein component; ribonuclease P protein component 324007 5454611 Plav_0300 Parvibaculum lavamentivorans DS-1 ribonuclease P protein component YP_001411580.1 323603 R 402881 CDS YP_001411581.1 154250757 5456248 complement(324058..324192) 1 NC_009719.1 PFAM: ribosomal protein L34; KEGG: acr:Acry_2138 ribosomal protein L34; 50S ribosomal protein L34 324192 5456248 Plav_0301 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L34 YP_001411581.1 324058 R 402881 CDS YP_001411582.1 154250758 5454576 324418..325347 1 NC_009719.1 PFAM: protein of unknown function DUF547; KEGG: lpp:lpp2805 hypothetical protein; hypothetical protein 325347 5454576 Plav_0302 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411582.1 324418 D 402881 CDS YP_001411583.1 154250759 5454331 325344..326084 1 NC_009719.1 PFAM: SNARE associated Golgi protein; KEGG: lpc:LPC_0984 mercuric reductase; hypothetical protein 326084 5454331 Plav_0303 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411583.1 325344 D 402881 CDS YP_001411584.1 154250760 5454871 326127..327551 1 NC_009719.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: jan:Jann_0645 pyridine nucleotide-disulphide oxidoreductase dimerisation protein; pyridine nucleotide-disulfide oxidoreductase dimerisation region 327551 5454871 Plav_0304 Parvibaculum lavamentivorans DS-1 pyridine nucleotide-disulfide oxidoreductase dimerisation region YP_001411584.1 326127 D 402881 CDS YP_001411585.1 154250761 5456888 327592..329106 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpc:RPC_0820 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 329106 5456888 Plav_0305 Parvibaculum lavamentivorans DS-1 integral membrane sensor signal transduction histidine kinase YP_001411585.1 327592 D 402881 CDS YP_001411586.1 154250762 5454078 329141..329902 1 NC_009719.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; KEGG: bxe:Bxe_A1241 trehalose-phosphatase; HAD family hydrolase 329902 5454078 Plav_0306 Parvibaculum lavamentivorans DS-1 HAD family hydrolase YP_001411586.1 329141 D 402881 CDS YP_001411587.1 154250763 5454040 329931..331742 1 NC_009719.1 PFAM: glycoside hydrolase 15-related; KEGG: mes:Meso_1528 glycoside hydrolase 15-related; glycoside hydrolase 15-like protein 331742 5454040 Plav_0307 Parvibaculum lavamentivorans DS-1 glycoside hydrolase 15-like protein YP_001411587.1 329931 D 402881 CDS YP_001411588.1 154250764 5455021 331739..333136 1 NC_009719.1 PFAM: glycosyl transferase family 20; KEGG: bam:Bamb_3873 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Alpha,alpha-trehalose-phosphate synthase 333136 5455021 Plav_0308 Parvibaculum lavamentivorans DS-1 Alpha,alpha-trehalose-phosphate synthase YP_001411588.1 331739 D 402881 CDS YP_001411589.1 154250765 5454840 333133..334137 1 NC_009719.1 TIGRFAM: glucokinase; PFAM: Glucokinase; KEGG: nwi:Nwi_1025 glucokinase; glucokinase 334137 5454840 Plav_0309 Parvibaculum lavamentivorans DS-1 glucokinase YP_001411589.1 333133 D 402881 CDS YP_001411590.1 154250766 5454159 complement(334134..335867) 1 NC_009719.1 TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: vpa:VP3011 gamma-glutamyltranspeptidase; gamma-glutamyltransferase 335867 5454159 Plav_0310 Parvibaculum lavamentivorans DS-1 gamma-glutamyltransferase YP_001411590.1 334134 R 402881 CDS YP_001411591.1 154250767 5456519 336036..337073 1 NC_009719.1 PFAM: peptidase S58 DmpA; KEGG: mmr:Mmar10_0463 peptidase S58, DmpA; peptidase S58 DmpA 337073 5456519 Plav_0311 Parvibaculum lavamentivorans DS-1 peptidase S58 DmpA YP_001411591.1 336036 D 402881 CDS YP_001411592.1 154250768 5453480 complement(337401..337976) 1 NC_009719.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: rpe:RPE_0699 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 337976 5453480 Plav_0312 Parvibaculum lavamentivorans DS-1 filamentation induced by cAMP protein fic YP_001411592.1 337401 R 402881 CDS YP_001411593.1 154250769 5456546 complement(337988..338191) 1 NC_009719.1 KEGG: rpe:RPE_0700 hypothetical protein; hypothetical protein 338191 5456546 Plav_0313 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411593.1 337988 R 402881 CDS YP_001411594.1 154250770 5453500 complement(338234..339511) 1 NC_009719.1 KEGG: hch:HCH_06379 hypothetical protein; hypothetical protein 339511 5453500 Plav_0314 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411594.1 338234 R 402881 CDS YP_001411595.1 154250771 5456828 339688..341598 1 NC_009719.1 PFAM: ParB domain protein nuclease; KEGG: swi:Swit_3672 ParB domain protein nuclease; nuclease 341598 5456828 Plav_0315 Parvibaculum lavamentivorans DS-1 nuclease YP_001411595.1 339688 D 402881 CDS YP_001411596.1 154250772 5453529 341772..342257 1 NC_009719.1 hypothetical protein 342257 5453529 Plav_0316 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411596.1 341772 D 402881 CDS YP_001411597.1 154250773 5454937 complement(342301..342789) 1 NC_009719.1 KEGG: eba:ebA2442 hypothetical protein; hypothetical protein 342789 5454937 Plav_0317 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411597.1 342301 R 402881 CDS YP_001411598.1 154250774 5453740 complement(342782..344524) 1 NC_009719.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: gur:Gura_2212 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD-binding protein 344524 5453740 Plav_0318 Parvibaculum lavamentivorans DS-1 UBA/THIF-type NAD/FAD-binding protein YP_001411598.1 342782 R 402881 CDS YP_001411599.1 154250775 5454621 complement(344540..345730) 1 NC_009719.1 KEGG: rme:Rmet_3041 hypothetical protein; hypothetical protein 345730 5454621 Plav_0319 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411599.1 344540 R 402881 CDS YP_001411600.1 154250776 5453443 complement(346290..347885) 1 NC_009719.1 PFAM: Resolvase domain; Recombinase; KEGG: nwi:Nwi_1250 resolvase; resolvase domain-containing protein 347885 5453443 Plav_0320 Parvibaculum lavamentivorans DS-1 resolvase domain-containing protein YP_001411600.1 346290 R 402881 CDS YP_001411601.1 154250777 5454712 348187..349521 1 NC_009719.1 KEGG: hch:HCH_06391 hypothetical protein; hypothetical protein 349521 5454712 Plav_0321 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411601.1 348187 D 402881 CDS YP_001411602.1 154250778 5456934 349675..350025 1 NC_009719.1 PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 350025 5456934 Plav_0322 Parvibaculum lavamentivorans DS-1 helix-turn-helix domain-containing protein YP_001411602.1 349675 D 402881 CDS YP_001411603.1 154250779 5454411 350022..350552 1 NC_009719.1 hypothetical protein 350552 5454411 Plav_0323 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411603.1 350022 D 402881 CDS YP_001411604.1 154250780 5455403 350632..350967 1 NC_009719.1 KEGG: mag:amb3705 hypothetical protein; hypothetical protein 350967 5455403 Plav_0324 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411604.1 350632 D 402881 CDS YP_001411605.1 154250781 5455753 complement(351016..351453) 1 NC_009719.1 hypothetical protein 351453 5455753 Plav_0325 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411605.1 351016 R 402881 CDS YP_001411606.1 154250782 5455665 complement(351500..351760) 1 NC_009719.1 hypothetical protein 351760 5455665 Plav_0326 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411606.1 351500 R 402881 CDS YP_001411607.1 154250783 5456991 352118..353287 1 NC_009719.1 PFAM: Phosphoglycerate mutase; KEGG: gbe:GbCGDNIH1_2315 phosphoglycerate mutase family protein; phosphoglycerate mutase 353287 5456991 Plav_0327 Parvibaculum lavamentivorans DS-1 phosphoglycerate mutase YP_001411607.1 352118 D 402881 CDS YP_001411608.1 154250784 5456033 353321..354028 1 NC_009719.1 KEGG: sco:SCO2312 secreted protein; hypothetical protein 354028 5456033 Plav_0328 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411608.1 353321 D 402881 CDS YP_001411609.1 154250785 5455865 354044..354661 1 NC_009719.1 KEGG: pai:PAE3049 phosphoribosyl transferase; phosphoribosyltransferase-like protein 354661 5455865 Plav_0329 Parvibaculum lavamentivorans DS-1 phosphoribosyltransferase-like protein YP_001411609.1 354044 D 402881 CDS YP_001411610.1 154250786 5455993 complement(354671..355252) 1 NC_009719.1 PFAM: integrase family protein; KEGG: jan:Jann_1536 phage integrase; integrase family protein 355252 5455993 Plav_0330 Parvibaculum lavamentivorans DS-1 integrase family protein YP_001411610.1 354671 R 402881 CDS YP_001411611.1 154250787 5453783 complement(355434..355778) 1 NC_009719.1 KEGG: rpe:RPE_1559 hypothetical protein; hypothetical protein 355778 5453783 Plav_0331 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411611.1 355434 R 402881 CDS YP_001411612.1 154250788 5455944 complement(355784..356458) 1 NC_009719.1 PFAM: FRG domain protein; KEGG: rpe:RPE_1558 hypothetical protein; FRG domain-containing protein 356458 5455944 Plav_0332 Parvibaculum lavamentivorans DS-1 FRG domain-containing protein YP_001411612.1 355784 R 402881 CDS YP_001411613.1 154250789 5456076 complement(356581..357744) 1 NC_009719.1 KEGG: mlo:mll6424 hypothetical protein; hypothetical protein 357744 5456076 Plav_0333 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411613.1 356581 R 402881 CDS YP_001411614.1 154250790 5455616 complement(357747..358091) 1 NC_009719.1 hypothetical protein 358091 5455616 Plav_0334 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411614.1 357747 R 402881 CDS YP_001411615.1 154250791 5455131 complement(358136..358729) 1 NC_009719.1 PFAM: ExsB family protein; KEGG: mlo:mll6423 hypothetical protein; ExsB family protein 358729 5455131 Plav_0335 Parvibaculum lavamentivorans DS-1 ExsB family protein YP_001411615.1 358136 R 402881 CDS YP_001411616.1 154250792 5455863 complement(358726..359910) 1 NC_009719.1 PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: mlo:mll6424 hypothetical protein; nucleoside 2-deoxyribosyltransferase 359910 5455863 Plav_0336 Parvibaculum lavamentivorans DS-1 nucleoside 2-deoxyribosyltransferase YP_001411616.1 358726 R 402881 CDS YP_001411617.1 154250793 5455587 complement(359907..360248) 1 NC_009719.1 hypothetical protein 360248 5455587 Plav_0337 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411617.1 359907 R 402881 CDS YP_001411618.1 154250794 5455755 complement(360319..361041) 1 NC_009719.1 KEGG: mlo:mll6426 hypothetical protein; hypothetical protein 361041 5455755 Plav_0338 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411618.1 360319 R 402881 CDS YP_001411619.1 154250795 5455746 361056..361364 1 NC_009719.1 XRE family transcriptional regulator 361364 5455746 Plav_0339 Parvibaculum lavamentivorans DS-1 XRE family transcriptional regulator YP_001411619.1 361056 D 402881 CDS YP_001411620.1 154250796 5455685 361502..361729 1 NC_009719.1 PFAM: Prophage CP4-57 regulatory; phage transcriptional regulator AlpA 361729 5455685 Plav_0340 Parvibaculum lavamentivorans DS-1 phage transcriptional regulator AlpA YP_001411620.1 361502 D 402881 CDS YP_001411621.1 154250797 5455679 362064..362444 1 NC_009719.1 KEGG: sil:SPO1229 hypothetical protein; hypothetical protein 362444 5455679 Plav_0341 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411621.1 362064 D 402881 CDS YP_001411622.1 154250798 5454783 362448..364676 1 NC_009719.1 KEGG: sil:SPO1230 hypothetical protein; hypothetical protein 364676 5454783 Plav_0342 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411622.1 362448 D 402881 CDS YP_001411623.1 154250799 5454520 364876..365796 1 NC_009719.1 KEGG: sil:SPO1231 hypothetical protein; hypothetical protein 365796 5454520 Plav_0343 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411623.1 364876 D 402881 CDS YP_001411624.1 154250800 5455506 complement(365985..366428) 1 NC_009719.1 KEGG: swi:Swit_5040 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 366428 5455506 Plav_0344 Parvibaculum lavamentivorans DS-1 2-oxo-hepta-3-ene-1,7-dioic acid hydratase YP_001411624.1 365985 R 402881 CDS YP_001411625.1 154250801 5453803 366725..367147 1 NC_009719.1 hypothetical protein 367147 5453803 Plav_0345 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411625.1 366725 D 402881 CDS YP_001411626.1 154250802 5455555 367212..369011 1 NC_009719.1 TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: maq:Maqu_0126 copper-resistance protein, CopA family; CopA family copper resistance protein 369011 5455555 Plav_0346 Parvibaculum lavamentivorans DS-1 CopA family copper resistance protein YP_001411626.1 367212 D 402881 CDS YP_001411627.1 154250803 5453886 369011..369721 1 NC_009719.1 PFAM: copper resistance B precursor; KEGG: ppf:Pput_0013 copper resistance B precursor; copper resistance B 369721 5453886 Plav_0347 Parvibaculum lavamentivorans DS-1 copper resistance B YP_001411627.1 369011 D 402881 CDS YP_001411628.1 154250804 5455389 369757..370326 1 NC_009719.1 PFAM: blue (type 1) copper domain protein; KEGG: pfo:Pfl_3854 uncharacterized copper-binding protein; blue (type1) copper domain-containing protein 370326 5455389 Plav_0348 Parvibaculum lavamentivorans DS-1 blue (type1) copper domain-containing protein YP_001411628.1 369757 D 402881 CDS YP_001411629.1 154250805 5455009 370488..370769 1 NC_009719.1 KEGG: mmr:Mmar10_0207 hypothetical protein; hypothetical protein 370769 5455009 Plav_0349 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411629.1 370488 D 402881 CDS YP_001411630.1 154250806 5454431 370772..372868 1 NC_009719.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mes:Meso_3876 heavy metal translocating P-type ATPase; copper-translocating P-type ATPase 372868 5454431 Plav_0350 Parvibaculum lavamentivorans DS-1 copper-translocating P-type ATPase YP_001411630.1 370772 D 402881 CDS YP_001411631.1 154250807 5455318 372865..374283 1 NC_009719.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: mes:Meso_3879 beta-lactamase-like; beta-lactamase domain-containing protein 374283 5455318 Plav_0351 Parvibaculum lavamentivorans DS-1 beta-lactamase domain-containing protein YP_001411631.1 372865 D 402881 CDS YP_001411632.1 154250808 5457029 374295..374750 1 NC_009719.1 KEGG: rfr:Rfer_0425 hypothetical protein; hypothetical protein 374750 5457029 Plav_0352 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411632.1 374295 D 402881 CDS YP_001411633.1 154250809 5455426 375029..375433 1 NC_009719.1 hypothetical protein 375433 5455426 Plav_0353 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411633.1 375029 D 402881 CDS YP_001411634.1 154250810 5456556 375494..377050 1 NC_009719.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: psa:PST_3362 heavy metal RND efflux membrane fusion protein, CzcB family; RND family efflux transporter MFP subunit 377050 5456556 Plav_0354 Parvibaculum lavamentivorans DS-1 RND family efflux transporter MFP subunit YP_001411634.1 375494 D 402881 CDS YP_001411635.1 154250811 5453706 377047..380181 1 NC_009719.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: nha:Nham_4404 heavy metal efflux pump CzcA; CzcA family heavy metal efflux protein 380181 5453706 Plav_0355 Parvibaculum lavamentivorans DS-1 CzcA family heavy metal efflux protein YP_001411635.1 377047 D 402881 CDS YP_001411636.1 154250812 5456443 complement(380279..380623) 1 NC_009719.1 PFAM: Rhodanese domain protein; KEGG: bmn:BMA10247_A0425 transcriptional regulator, ArsR family; rhodanese domain-containing protein 380623 5456443 Plav_0356 Parvibaculum lavamentivorans DS-1 rhodanese domain-containing protein YP_001411636.1 380279 R 402881 CDS YP_001411637.1 154250813 5453656 complement(380705..381874) 1 NC_009719.1 PFAM: integrase family protein; KEGG: sil:SPO1219 site-specific recombinase, phage integrase family; integrase family protein 381874 5453656 Plav_0357 Parvibaculum lavamentivorans DS-1 integrase family protein YP_001411637.1 380705 R 402881 CDS YP_001411638.1 154250814 5456368 382262..384070 1 NC_009719.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: sme:SMa0113 putative sensory transduction histidine kinase; signal transduction histidine kinase 384070 5456368 Plav_0358 Parvibaculum lavamentivorans DS-1 signal transduction histidine kinase YP_001411638.1 382262 D 402881 CDS YP_001411639.1 154250815 5454656 384241..385491 1 NC_009719.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: sal:Sala_0110 acetyl-CoA C-acyltransferase; acetyl-CoA acetyltransferase 385491 5454656 Plav_0359 Parvibaculum lavamentivorans DS-1 acetyl-CoA acetyltransferase YP_001411639.1 384241 D 402881 CDS YP_001411640.1 154250816 5454189 complement(385504..387165) 1 NC_009719.1 PFAM: sulfatase; KEGG: hne:HNE_1667 sulfatase family protein; Steryl-sulfatase 387165 5454189 Plav_0360 Parvibaculum lavamentivorans DS-1 Steryl-sulfatase YP_001411640.1 385504 R 402881 CDS YP_001411641.1 154250817 5453462 complement(387238..387816) 1 NC_009719.1 KEGG: sal:Sala_0301 putative transcriptional regulator, TetR family; TetR family transcriptional regulator 387816 5453462 Plav_0361 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001411641.1 387238 R 402881 CDS YP_001411642.1 154250818 5456875 complement(387816..388283) 1 NC_009719.1 KEGG: hne:HNE_1664 hypothetical protein; hypothetical protein 388283 5456875 Plav_0362 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411642.1 387816 R 402881 CDS YP_001411643.1 154250819 5454145 388544..389521 1 NC_009719.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bja:blr2606 2-nitropropane dioxygenase; 2-nitropropane dioxygenase 389521 5454145 Plav_0363 Parvibaculum lavamentivorans DS-1 2-nitropropane dioxygenase YP_001411643.1 388544 D 402881 CDS YP_001411644.1 154250820 5456912 389530..389742 1 NC_009719.1 hypothetical protein 389742 5456912 Plav_0364 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411644.1 389530 D 402881 CDS YP_001411645.1 154250821 5453856 389831..390646 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reu:Reut_A3284 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 390646 5453856 Plav_0365 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001411645.1 389831 D 402881 CDS YP_001411646.1 154250822 5453604 complement(390650..392104) 1 NC_009719.1 PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_C7122 flavin-containing monooxygenase FMO; FAD dependent oxidoreductase 392104 5453604 Plav_0366 Parvibaculum lavamentivorans DS-1 FAD dependent oxidoreductase YP_001411646.1 390650 R 402881 CDS YP_001411647.1 154250823 5455458 complement(392122..393210) 1 NC_009719.1 PFAM: aminoglycoside phosphotransferase; protein of unknown function DUF227; KEGG: hne:HNE_1389 hypothetical protein; aminoglycoside phosphotransferase 393210 5455458 Plav_0367 Parvibaculum lavamentivorans DS-1 aminoglycoside phosphotransferase YP_001411647.1 392122 R 402881 CDS YP_001411648.1 154250824 5455166 complement(393231..393602) 1 NC_009719.1 KEGG: hne:HNE_0989 hypothetical protein; hypothetical protein 393602 5455166 Plav_0368 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411648.1 393231 R 402881 CDS YP_001411649.1 154250825 5456989 complement(393599..394855) 1 NC_009719.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: hne:HNE_0988 monooxygenase; FAD-binding monooxygenase 394855 5456989 Plav_0369 Parvibaculum lavamentivorans DS-1 FAD-binding monooxygenase YP_001411649.1 393599 R 402881 CDS YP_001411650.1 154250826 5454085 395100..396137 1 NC_009719.1 PFAM: aminoglycoside phosphotransferase; KEGG: hne:HNE_2794 phosphotransferase enzyme family protein; aminoglycoside phosphotransferase 396137 5454085 Plav_0370 Parvibaculum lavamentivorans DS-1 aminoglycoside phosphotransferase YP_001411650.1 395100 D 402881 CDS YP_001411651.1 154250827 5455536 396162..396899 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr1495 oxidoreductase; short-chain dehydrogenase/reductase SDR 396899 5455536 Plav_0371 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001411651.1 396162 D 402881 CDS YP_001411652.1 154250828 5455147 396914..397960 1 NC_009719.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: hne:HNE_2796 alcohol dehydrogenase, class III; alcohol dehydrogenase 397960 5455147 Plav_0372 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001411652.1 396914 D 402881 CDS YP_001411653.1 154250829 5454292 complement(397968..398720) 1 NC_009719.1 TIGRFAM: TonB family protein; KEGG: rpe:RPE_0962 TonB family protein; TonB family protein 398720 5454292 Plav_0373 Parvibaculum lavamentivorans DS-1 TonB family protein YP_001411653.1 397968 R 402881 CDS YP_001411654.1 154250830 5453960 complement(398717..399142) 1 NC_009719.1 TIGRFAM: TonB system transport protein ExbD type-1; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rpd:RPD_2358 biopolymer transport protein ExbD/TolR; TonB system transport protein ExbD type-1 399142 5453960 Plav_0374 Parvibaculum lavamentivorans DS-1 TonB system transport protein ExbD type-1 YP_001411654.1 398717 R 402881 CDS YP_001411655.1 154250831 5456121 complement(399146..400075) 1 NC_009719.1 TIGRFAM: TonB-system energizer ExbB type-1; PFAM: MotA/TolQ/ExbB proton channel; KEGG: pen:PSEEN5451 solvent/drug/ferric siderophore transport protein ExbB; TonB-system energizer ExbB type-1 400075 5456121 Plav_0375 Parvibaculum lavamentivorans DS-1 TonB-system energizer ExbB type-1 YP_001411655.1 399146 R 402881 CDS YP_001411656.1 154250832 5455248 400410..402719 1 NC_009719.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pmy:Pmen_0802 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 402719 5455248 Plav_0376 Parvibaculum lavamentivorans DS-1 TonB-dependent siderophore receptor YP_001411656.1 400410 D 402881 CDS YP_001411657.1 154250833 5456955 402853..403533 1 NC_009719.1 PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: pmy:Pmen_0803 2OG-Fe(II) oxygenase; putative hydroxylase 403533 5456955 Plav_0377 Parvibaculum lavamentivorans DS-1 putative hydroxylase YP_001411657.1 402853 D 402881 CDS YP_001411658.1 154250834 5454403 403530..404645 1 NC_009719.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: pmy:Pmen_0804 FMN-dependent alpha-hydroxy acid dehydrogenase; FMN-dependent alpha-hydroxy acid dehydrogenase 404645 5454403 Plav_0378 Parvibaculum lavamentivorans DS-1 FMN-dependent alpha-hydroxy acid dehydrogenase YP_001411658.1 403530 D 402881 CDS YP_001411659.1 154250835 5454344 404728..405246 1 NC_009719.1 PFAM: protein of unknown function DUF1457; hypothetical protein 405246 5454344 Plav_0379 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411659.1 404728 D 402881 CDS YP_001411660.1 154250836 5453770 405347..407242 1 NC_009719.1 PFAM: beta-lactamase domain protein; KEGG: reh:H16_A3671 alkyl sulfatase; beta-lactamase domain-containing protein 407242 5453770 Plav_0380 Parvibaculum lavamentivorans DS-1 beta-lactamase domain-containing protein YP_001411660.1 405347 D 402881 CDS YP_001411661.1 154250837 5455027 407261..408283 1 NC_009719.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bam:Bamb_5531 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 408283 5455027 Plav_0381 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001411661.1 407261 D 402881 CDS YP_001411662.1 154250838 5454056 408407..408772 1 NC_009719.1 hypothetical protein 408772 5454056 Plav_0382 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411662.1 408407 D 402881 CDS YP_001411663.1 154250839 5454513 complement(408779..412966) 1 NC_009719.1 PFAM: protein of unknown function DUF490; KEGG: rru:Rru_A2098 protein of unknown function DUF490; hypothetical protein 412966 5454513 Plav_0383 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411663.1 408779 R 402881 CDS YP_001411664.1 154250840 5453815 complement(412966..414813) 1 NC_009719.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: rru:Rru_A2099 surface antigen; surface antigen (D15) 414813 5453815 Plav_0384 Parvibaculum lavamentivorans DS-1 surface antigen (D15) YP_001411664.1 412966 R 402881 CDS YP_001411665.1 154250841 5456051 415033..417222 1 NC_009719.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: nha:Nham_3434 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 417222 5456051 Plav_0385 Parvibaculum lavamentivorans DS-1 heavy metal translocating P-type ATPase YP_001411665.1 415033 D 402881 CDS YP_001411666.1 154250842 5453978 417292..418560 1 NC_009719.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: shw:Sputw3181_2197 protein of unknown function DUF955; helix-turn-helix domain-containing protein 418560 5453978 Plav_0386 Parvibaculum lavamentivorans DS-1 helix-turn-helix domain-containing protein YP_001411666.1 417292 D 402881 CDS YP_001411667.1 154250843 5456844 418572..419684 1 NC_009719.1 KEGG: reh:H16_A0011 hypothetical protein; hypothetical protein 419684 5456844 Plav_0387 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411667.1 418572 D 402881 CDS YP_001411668.1 154250844 5454826 419684..420433 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: reu:Reut_B3897 regulatory protein, TetR; TetR family transcriptional regulator 420433 5454826 Plav_0388 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001411668.1 419684 D 402881 CDS YP_001411669.1 154250845 5456376 complement(420808..421791) 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: sal:Sala_1337 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 421791 5456376 Plav_0389 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001411669.1 420808 R 402881 CDS YP_001411670.1 154250846 5454047 complement(421961..423025) 1 NC_009719.1 PFAM: Integral membrane protein TerC; KEGG: rpd:RPD_0056 integral membrane protein TerC; integral membrane protein TerC 423025 5454047 Plav_0390 Parvibaculum lavamentivorans DS-1 integral membrane protein TerC YP_001411670.1 421961 R 402881 CDS YP_001411671.1 154250847 5455081 complement(423479..424318) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pmy:Pmen_1266 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 424318 5455081 Plav_0391 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001411671.1 423479 R 402881 CDS YP_001411672.1 154250848 5453976 424479..425696 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mkm:Mkms_3808 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 425696 5453976 Plav_0392 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001411672.1 424479 D 402881 CDS YP_001411673.1 154250849 5455328 425708..427045 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bbt:BBta_0757 two component sensor histidine kinase; multi-sensor signal transduction histidine kinase 427045 5455328 Plav_0393 Parvibaculum lavamentivorans DS-1 multi-sensor signal transduction histidine kinase YP_001411673.1 425708 D 402881 CDS YP_001411674.1 154250850 5454558 427196..428275 1 NC_009719.1 KEGG: rru:Rru_A0598 phosphate ABC transporter, periplasmic binding protein; phosphate ABC transporter substrate-binding protein 428275 5454558 Plav_0394 Parvibaculum lavamentivorans DS-1 phosphate ABC transporter substrate-binding protein YP_001411674.1 427196 D 402881 CDS YP_001411675.1 154250851 5455406 428351..429730 1 NC_009719.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mca:MCA1072 phosphate ABC transporter, permease protein; phosphate ABC transporter permease 429730 5455406 Plav_0395 Parvibaculum lavamentivorans DS-1 phosphate ABC transporter permease YP_001411675.1 428351 D 402881 CDS YP_001411676.1 154250852 5453507 429723..431015 1 NC_009719.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A0600 phosphate transport system permease protein 2; phosphate ABC transporter permease 431015 5453507 Plav_0396 Parvibaculum lavamentivorans DS-1 phosphate ABC transporter permease YP_001411676.1 429723 D 402881 CDS YP_001411677.1 154250853 5454823 431017..431871 1 NC_009719.1 TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mes:Meso_3118 phosphate ABC transporter, ATPase subunit; phosphate ABC transporter ATPase 431871 5454823 Plav_0397 Parvibaculum lavamentivorans DS-1 phosphate ABC transporter ATPase YP_001411677.1 431017 D 402881 CDS YP_001411678.1 154250854 5454170 431916..432632 1 NC_009719.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: phoU; phosphate transport regulon regulator PhoU; K02039 phosphate transport system protein; phosphate uptake regulator PhoU 432632 5454170 Plav_0398 Parvibaculum lavamentivorans DS-1 phosphate uptake regulator PhoU YP_001411678.1 431916 D 402881 CDS YP_001411679.1 154250855 5454241 432650..433468 1 NC_009719.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mmr:Mmar10_0483 two component transcriptional regulator, winged helix family; two component transcriptional regulator 433468 5454241 Plav_0399 Parvibaculum lavamentivorans DS-1 two component transcriptional regulator YP_001411679.1 432650 D 402881 CDS YP_001411680.1 154250856 5454211 complement(433586..434101) 1 NC_009719.1 PFAM: GcrA cell cycle regulator; KEGG: mmr:Mmar10_0485 GcrA cell cycle regulator; GcrA cell cycle regulator 434101 5454211 Plav_0400 Parvibaculum lavamentivorans DS-1 GcrA cell cycle regulator YP_001411680.1 433586 R 402881 CDS YP_001411681.1 154250857 5456169 434362..435270 1 NC_009719.1 PFAM: ABC-2 type transporter; KEGG: mmr:Mmar10_0486 ABC-2 type transporter; ABC transporter 435270 5456169 Plav_0401 Parvibaculum lavamentivorans DS-1 ABC transporter YP_001411681.1 434362 D 402881 CDS YP_001411682.1 154250858 5453522 435479..436819 1 NC_009719.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: ret:RHE_CH00516 diaminobutyrate--pyruvate aminotransferase protein; acetylornithine and succinylornithine aminotransferase 436819 5453522 Plav_0402 Parvibaculum lavamentivorans DS-1 acetylornithine and succinylornithine aminotransferase YP_001411682.1 435479 D 402881 CDS YP_001411683.1 154250859 5453727 436816..437757 1 NC_009719.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: rpe:RPE_4883 ornithine carbamoyltransferase; ornithine carbamoyltransferase 437757 5453727 Plav_0403 Parvibaculum lavamentivorans DS-1 ornithine carbamoyltransferase YP_001411683.1 436816 D 402881 CDS YP_001411684.1 154250860 5454773 437745..438740 1 NC_009719.1 PFAM: Hsp33 protein; KEGG: bra:BRADO6776 heat shock protein HSP33; Hsp33 protein 438740 5454773 Plav_0404 Parvibaculum lavamentivorans DS-1 Hsp33 protein YP_001411684.1 437745 D 402881 CDS YP_001411685.1 154250861 5453599 438737..439360 1 NC_009719.1 KEGG: mag:amb0319 hypothetical protein; hypothetical protein 439360 5453599 Plav_0405 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411685.1 438737 D 402881 CDS YP_001411686.1 154250862 5453354 439463..439924 1 NC_009719.1 PFAM: BLUF domain protein; KEGG: hne:HNE_0975 BLUF domain protein; BLUF domain-containing protein 439924 5453354 Plav_0406 Parvibaculum lavamentivorans DS-1 BLUF domain-containing protein YP_001411686.1 439463 D 402881 CDS YP_001411687.1 154250863 5455873 complement(439907..441085) 1 NC_009719.1 TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mag:amb2375 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase and related deacylase; acetylornithine deacetylase ArgE 441085 5455873 Plav_0407 Parvibaculum lavamentivorans DS-1 acetylornithine deacetylase ArgE YP_001411687.1 439907 R 402881 CDS YP_001411688.1 154250864 5453512 complement(441196..441588) 1 NC_009719.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 441588 apaG 5453512 apaG Parvibaculum lavamentivorans DS-1 ApaG protein YP_001411688.1 441196 R 402881 CDS YP_001411689.1 154250865 5455700 complement(441782..442972) 1 NC_009719.1 TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rpd:RPD_0903 O-succinylhomoserine sulfhydrylase; O-succinylhomoserine sulfhydrylase 442972 5455700 Plav_0409 Parvibaculum lavamentivorans DS-1 O-succinylhomoserine sulfhydrylase YP_001411689.1 441782 R 402881 CDS YP_001411690.1 154250866 5454046 443231..444388 1 NC_009719.1 Catalyzes the deamination of dCTP to form dUTP; 2'-deoxycytidine 5'-triphosphate deaminase 444388 5454046 Plav_0410 Parvibaculum lavamentivorans DS-1 2'-deoxycytidine 5'-triphosphate deaminase YP_001411690.1 443231 D 402881 CDS YP_001411691.1 154250867 5454004 444395..444772 1 NC_009719.1 PFAM: LrgA family protein; KEGG: csa:Csal_1793 LrgA; LrgA family protein 444772 5454004 Plav_0411 Parvibaculum lavamentivorans DS-1 LrgA family protein YP_001411691.1 444395 D 402881 CDS YP_001411692.1 154250868 5455072 444769..445494 1 NC_009719.1 PFAM: LrgB family protein; KEGG: dar:Daro_3106 LrgB-like protein; LrgB family protein 445494 5455072 Plav_0412 Parvibaculum lavamentivorans DS-1 LrgB family protein YP_001411692.1 444769 D 402881 CDS YP_001411693.1 154250869 5454246 complement(445579..445995) 1 NC_009719.1 hypothetical protein 445995 5454246 Plav_0413 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411693.1 445579 R 402881 CDS YP_001411694.1 154250870 5454843 complement(446153..447145) 1 NC_009719.1 PFAM: Radical SAM domain protein; KEGG: rde:RD1_2724 radical SAM domain protein; radical SAM domain-containing protein 447145 5454843 Plav_0414 Parvibaculum lavamentivorans DS-1 radical SAM domain-containing protein YP_001411694.1 446153 R 402881 CDS YP_001411695.1 154250871 5456107 447199..448218 1 NC_009719.1 KEGG: tde:TDE1337 hypothetical protein; hypothetical protein 448218 5456107 Plav_0415 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411695.1 447199 D 402881 CDS YP_001411696.1 154250872 5456164 complement(448510..449373) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mes:Meso_1525 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 449373 5456164 Plav_0416 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001411696.1 448510 R 402881 CDS YP_001411697.1 154250873 5455375 complement(449401..450018) 1 NC_009719.1 PFAM: NADPH-dependent FMN reductase; KEGG: ret:RHE_PE00021 hypothetical protein; NADPH-dependent FMN reductase 450018 5455375 Plav_0417 Parvibaculum lavamentivorans DS-1 NADPH-dependent FMN reductase YP_001411697.1 449401 R 402881 CDS YP_001411698.1 154250874 5453521 complement(450156..450341) 1 NC_009719.1 KEGG: rsh:Rsph17029_2606 hypothetical protein; hypothetical protein 450341 5453521 Plav_0418 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411698.1 450156 R 402881 CDS YP_001411699.1 154250875 5453981 450492..451853 1 NC_009719.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: nha:Nham_1581 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 451853 5453981 Plav_0419 Parvibaculum lavamentivorans DS-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001411699.1 450492 D 402881 CDS YP_001411700.1 154250876 5454333 complement(451873..452595) 1 NC_009719.1 KEGG: hne:HNE_1502 hypothetical protein; hypothetical protein 452595 5454333 Plav_0420 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411700.1 451873 R 402881 CDS YP_001411701.1 154250877 5454269 452686..454671 1 NC_009719.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: psa:PST_0499 probable choline transporter; choline/carnitine/betaine transporter 454671 5454269 Plav_0421 Parvibaculum lavamentivorans DS-1 choline/carnitine/betaine transporter YP_001411701.1 452686 D 402881 CDS YP_001411702.1 154250878 5453822 454680..456260 1 NC_009719.1 catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase 456260 5453822 Plav_0422 Parvibaculum lavamentivorans DS-1 malonyl-CoA synthase YP_001411702.1 454680 D 402881 CDS YP_001411703.1 154250879 5454881 complement(456270..456797) 1 NC_009719.1 PFAM: response regulator receiver; KEGG: mmr:Mmar10_0951 response regulator receiver protein; response regulator receiver protein 456797 5454881 Plav_0423 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001411703.1 456270 R 402881 CDS YP_001411704.1 154250880 5453509 complement(456871..458829) 1 NC_009719.1 PFAM: glycosyl transferase family 2; General secretory system II protein E domain protein; KEGG: xcb:XC_3555 hypothetical protein; glycosyl transferase family protein 458829 5453509 Plav_0424 Parvibaculum lavamentivorans DS-1 glycosyl transferase family protein YP_001411704.1 456871 R 402881 CDS YP_001411705.1 154250881 5455343 459054..460013 1 NC_009719.1 PFAM: extracellular solute-binding protein family 3; KEGG: sme:SMc00140 putative amino-acid binding periplasmic protein; extracellular solute-binding protein 460013 5455343 Plav_0425 Parvibaculum lavamentivorans DS-1 extracellular solute-binding protein YP_001411705.1 459054 D 402881 CDS YP_001411706.1 154250882 5454942 complement(460007..460564) 1 NC_009719.1 PFAM: Phosphoglycerate mutase; KEGG: swi:Swit_3559 putative phosphohistidine phosphatase, SixA; putative phosphohistidine phosphatase SixA 460564 5454942 Plav_0426 Parvibaculum lavamentivorans DS-1 putative phosphohistidine phosphatase SixA YP_001411706.1 460007 R 402881 CDS YP_001411707.1 154250883 5455029 complement(460561..461448) 1 NC_009719.1 KEGG: aeh:Mlg_0287 sterol desaturase-like protein; sterol desaturase-like protein 461448 5455029 Plav_0427 Parvibaculum lavamentivorans DS-1 sterol desaturase-like protein YP_001411707.1 460561 R 402881 CDS YP_001411708.1 154250884 5454988 461587..462357 1 NC_009719.1 KEGG: stm:STM0050 putative nitrite reductase; hypothetical protein 462357 5454988 Plav_0428 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411708.1 461587 D 402881 CDS YP_001411709.1 154250885 5456897 complement(462362..462772) 1 NC_009719.1 KEGG: ret:RHE_CH00534 hypothetical protein; hypothetical protein 462772 5456897 Plav_0429 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411709.1 462362 R 402881 CDS YP_001411710.1 154250886 5453894 complement(462803..465715) 1 NC_009719.1 SMART: helicase c2; KEGG: mag:amb3608 Rad3-related DNA helicase; helicase c2 465715 5453894 Plav_0430 Parvibaculum lavamentivorans DS-1 helicase c2 YP_001411710.1 462803 R 402881 CDS YP_001411711.1 154250887 5453693 complement(465755..467749) 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xcv:XCV0528 two-component system sensor protein; integral membrane sensor signal transduction histidine kinase 467749 5453693 Plav_0431 Parvibaculum lavamentivorans DS-1 integral membrane sensor signal transduction histidine kinase YP_001411711.1 465755 R 402881 CDS YP_001411712.1 154250888 5453742 467806..469425 1 NC_009719.1 class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; lysyl-tRNA synthetase 469425 lysK 5453742 lysK Parvibaculum lavamentivorans DS-1 lysyl-tRNA synthetase YP_001411712.1 467806 D 402881 CDS YP_001411713.1 154250889 5454424 469500..471011 1 NC_009719.1 KEGG: ppr:PBPRA1525 hypothetical protein; hypothetical protein 471011 5454424 Plav_0433 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411713.1 469500 D 402881 CDS YP_001411714.1 154250890 5453893 471008..471832 1 NC_009719.1 KEGG: mmr:Mmar10_0515 hypothetical protein; hypothetical protein 471832 5453893 Plav_0434 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411714.1 471008 D 402881 CDS YP_001411715.1 154250891 5453793 complement(471835..472479) 1 NC_009719.1 PFAM: peptidase S24 S26A and S26B; KEGG: rpc:RPC_0757 putative phage repressor; putative phage repressor 472479 5453793 Plav_0435 Parvibaculum lavamentivorans DS-1 putative phage repressor YP_001411715.1 471835 R 402881 CDS YP_001411716.1 154250892 5455739 472620..472976 1 NC_009719.1 PFAM: protein of unknown function DUF952; KEGG: bmb:BruAb1_0338 hypothetical protein; hypothetical protein 472976 5455739 Plav_0436 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411716.1 472620 D 402881 CDS YP_001411717.1 154250893 5454449 472977..474023 1 NC_009719.1 PFAM: dihydroorotate dehydrogenase; KEGG: mag:amb3890 dihydroorotate dehydrogenase; dihydroorotate dehydrogenase 474023 5454449 Plav_0437 Parvibaculum lavamentivorans DS-1 dihydroorotate dehydrogenase YP_001411717.1 472977 D 402881 CDS YP_001411718.1 154250894 5455907 474032..474382 1 NC_009719.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: noc:Noc_0186 arsenate reductase; arsenate reductase 474382 5455907 Plav_0438 Parvibaculum lavamentivorans DS-1 arsenate reductase YP_001411718.1 474032 D 402881 CDS YP_001411719.1 154250895 5457040 complement(474386..475702) 1 NC_009719.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rpc:RPC_0753 MATE efflux family protein; MATE efflux family protein 475702 5457040 Plav_0439 Parvibaculum lavamentivorans DS-1 MATE efflux family protein YP_001411719.1 474386 R 402881 CDS YP_001411720.1 154250896 5456680 complement(475699..476136) 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: rsp:RSP_2203 hypothetical protein; thioesterase superfamily protein 476136 5456680 Plav_0440 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001411720.1 475699 R 402881 CDS YP_001411721.1 154250897 5453763 complement(476133..476834) 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: rpb:RPB_1029 phenylacetic acid degradation-related protein; thioesterase superfamily protein 476834 5453763 Plav_0441 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001411721.1 476133 R 402881 CDS YP_001411722.1 154250898 5456493 476882..477349 1 NC_009719.1 PFAM: protein of unknown function DUF1457; hypothetical protein 477349 5456493 Plav_0442 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411722.1 476882 D 402881 CDS YP_001411723.1 154250899 5455598 477432..478859 1 NC_009719.1 PFAM: flavin-containing monooxygenase FMO; KEGG: monooxygenase, flavin-binding family; K07222 putative flavoprotein involved in K+ transport; flavin-containing monooxygenase 478859 5455598 Plav_0443 Parvibaculum lavamentivorans DS-1 flavin-containing monooxygenase YP_001411723.1 477432 D 402881 CDS YP_001411724.1 154250900 5455670 479000..479662 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: transcriptional regulator, TetR family; TetR family transcriptional regulator 479662 5455670 Plav_0444 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001411724.1 479000 D 402881 CDS YP_001411725.1 154250901 5453577 479735..480790 1 NC_009719.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: esterase, putative; alpha/beta hydrolase domain-containing protein 480790 5453577 Plav_0445 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase domain-containing protein YP_001411725.1 479735 D 402881 CDS YP_001411726.1 154250902 5454676 480794..481144 1 NC_009719.1 KEGG: rpc:RPC_1797 hypothetical protein; hypothetical protein 481144 5454676 Plav_0446 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411726.1 480794 D 402881 CDS YP_001411727.1 154250903 5455895 481402..481977 1 NC_009719.1 PFAM: protein of unknown function UPF0016; KEGG: mag:amb2468 predicted membrane protein; hypothetical protein 481977 5455895 Plav_0447 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411727.1 481402 D 402881 CDS YP_001411728.1 154250904 5455968 complement(481968..482846) 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: bsu:BG12888 similar to epoxide hydrolase; alpha/beta hydrolase fold protein 482846 5455968 Plav_0448 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001411728.1 481968 R 402881 CDS YP_001411729.1 154250905 5456821 482966..483940 1 NC_009719.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: hne:HNE_2975 oxidoreductase, zinc-binding dehydrogenase family; alcohol dehydrogenase 483940 5456821 Plav_0449 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001411729.1 482966 D 402881 CDS YP_001411730.1 154250906 5454710 complement(484210..485100) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hne:HNE_0595 oxidoreductase, short chain dehydrogenase/reductase family protein; short-chain dehydrogenase/reductase SDR 485100 5454710 Plav_0450 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001411730.1 484210 R 402881 CDS YP_001411731.1 154250907 5456843 complement(485387..485659) 1 NC_009719.1 KEGG: ret:RHE_CH00543 hypothetical protein; hypothetical protein 485659 5456843 Plav_0451 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411731.1 485387 R 402881 CDS YP_001411732.1 154250908 5456204 complement(485705..486556) 1 NC_009719.1 PFAM: MscS Mechanosensitive ion channel; KEGG: mmr:Mmar10_0527 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 486556 5456204 Plav_0452 Parvibaculum lavamentivorans DS-1 mechanosensitive ion channel protein MscS YP_001411732.1 485705 R 402881 CDS YP_001411733.1 154250909 5455222 486776..489331 1 NC_009719.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: mes:Meso_0029 DEAD/H associated; DEAD/DEAH box helicase 489331 5455222 Plav_0453 Parvibaculum lavamentivorans DS-1 DEAD/DEAH box helicase YP_001411733.1 486776 D 402881 CDS YP_001411734.1 154250910 5453400 489409..490125 1 NC_009719.1 KEGG: bja:blr1149 putative ICC-like phosphoesterases; putative ICC-like phosphoesterase 490125 5453400 Plav_0454 Parvibaculum lavamentivorans DS-1 putative ICC-like phosphoesterase YP_001411734.1 489409 D 402881 CDS YP_001411735.1 154250911 5455628 complement(490296..491075) 1 NC_009719.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: rpb:RPB_4376 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein transmembrane subunit 491075 5455628 Plav_0455 Parvibaculum lavamentivorans DS-1 cytochrome c biogenesis protein transmembrane subunit YP_001411735.1 490296 R 402881 CDS YP_001411736.1 154250912 5456384 complement(491189..491986) 1 NC_009719.1 KEGG: mag:amb4405 hypothetical protein; hypothetical protein 491986 5456384 Plav_0456 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411736.1 491189 R 402881 CDS YP_001411737.1 154250913 5455702 complement(491983..492906) 1 NC_009719.1 PFAM: protein of unknown function DUF81; KEGG: mlo:mll5620 hypothetical protein; hypothetical protein 492906 5455702 Plav_0457 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411737.1 491983 R 402881 CDS YP_001411738.1 154250914 5456957 complement(493044..496082) 1 NC_009719.1 PFAM: Peptidoglycan-binding domain 1 protein; Sel1 domain protein repeat-containing protein; KEGG: rle:RL0588 putative peptidoglycan binding protein; peptidoglycan-binding domain-containing protein 496082 5456957 Plav_0458 Parvibaculum lavamentivorans DS-1 peptidoglycan-binding domain-containing protein YP_001411738.1 493044 R 402881 CDS YP_001411739.1 154250915 5455694 complement(496312..497394) 1 NC_009719.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pmy:Pmen_4514 TRAP dicarboxylate transporter-DctP subunit; TRAP C4-dicarboxylate transport system permease subunit DctP 497394 5455694 Plav_0459 Parvibaculum lavamentivorans DS-1 TRAP C4-dicarboxylate transport system permease subunit DctP YP_001411739.1 496312 R 402881 CDS YP_001411740.1 154250916 5456992 complement(497453..498007) 1 NC_009719.1 PFAM: SCP-like extracellular; KEGG: hypothetical protein; hypothetical protein 498007 5456992 Plav_0460 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411740.1 497453 R 402881 CDS YP_001411741.1 154250917 5454095 498266..498790 1 NC_009719.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: transcriptional regulator, putative; MerR family transcriptional regulator 498790 5454095 Plav_0461 Parvibaculum lavamentivorans DS-1 MerR family transcriptional regulator YP_001411741.1 498266 D 402881 CDS YP_001411742.1 154250918 5455202 498850..500643 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bbt:BBta_0815 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 500643 5455202 Plav_0462 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001411742.1 498850 D 402881 CDS YP_001411743.1 154250919 5454266 500668..501825 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rme:Rmet_5152 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 501825 5454266 Plav_0463 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001411743.1 500668 D 402881 CDS YP_001411744.1 154250920 5456140 501874..503079 1 NC_009719.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 503079 5456140 Plav_0464 Parvibaculum lavamentivorans DS-1 acetyl-CoA acetyltransferase YP_001411744.1 501874 D 402881 CDS YP_001411745.1 154250921 5456435 503087..505339 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 505339 5456435 Plav_0465 Parvibaculum lavamentivorans DS-1 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_001411745.1 503087 D 402881 CDS YP_001411746.1 154250922 5456013 complement(505563..507392) 1 NC_009719.1 PFAM: protein of unknown function DUF1302; KEGG: cps:CPS_3432 hypothetical protein; hypothetical protein 507392 5456013 Plav_0466 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411746.1 505563 R 402881 CDS YP_001411747.1 154250923 5455108 complement(508097..509950) 1 NC_009719.1 PFAM: protein of unknown function DUF1302; KEGG: pau:PA14_19810 hypothetical protein; hypothetical protein 509950 5455108 Plav_0467 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411747.1 508097 R 402881 CDS YP_001411748.1 154250924 5454242 510636..511709 1 NC_009719.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bcn:Bcen_2046 transcriptional regulator, AraC family; AraC family transcriptional regulator 511709 5454242 Plav_0468 Parvibaculum lavamentivorans DS-1 AraC family transcriptional regulator YP_001411748.1 510636 D 402881 CDS YP_001411749.1 154250925 5453687 511684..512364 1 NC_009719.1 PFAM: ThiJ/PfpI domain protein; KEGG: sco:SCO6747 hypothetical protein; ThiJ/PfpI domain-containing protein 512364 5453687 Plav_0469 Parvibaculum lavamentivorans DS-1 ThiJ/PfpI domain-containing protein YP_001411749.1 511684 D 402881 CDS YP_001411750.1 154250926 5453647 512376..513008 1 NC_009719.1 PFAM: ThiJ/PfpI domain protein; KEGG: gur:Gura_3528 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 513008 5453647 Plav_0470 Parvibaculum lavamentivorans DS-1 ThiJ/PfpI domain-containing protein YP_001411750.1 512376 D 402881 CDS YP_001411751.1 154250927 5455032 513046..514065 1 NC_009719.1 KEGG: bbr:BB1197 hypothetical protein; hypothetical protein 514065 5455032 Plav_0471 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411751.1 513046 D 402881 CDS YP_001411752.1 154250928 5456259 514112..515080 1 NC_009719.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: fal:FRAAL0539 conserved hypothetical protein, putative esterase/lipase domain; alpha/beta hydrolase domain-containing protein 515080 5456259 Plav_0472 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase domain-containing protein YP_001411752.1 514112 D 402881 CDS YP_001411753.1 154250929 5455499 complement(515077..515289) 1 NC_009719.1 KEGG: mes:Meso_0629 hypothetical protein; hypothetical protein 515289 5455499 Plav_0473 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411753.1 515077 R 402881 CDS YP_001411754.1 154250930 5456818 515428..516306 1 NC_009719.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 516306 5456818 Plav_0474 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase YP_001411754.1 515428 D 402881 CDS YP_001411755.1 154250931 5455249 516306..516911 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: mjl:Mjls_2665 putative transcriptional regulator, TetR family; TetR family transcriptional regulator 516911 5455249 Plav_0475 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001411755.1 516306 D 402881 CDS YP_001411756.1 154250932 5455828 516963..517856 1 NC_009719.1 KEGG: hypothetical protein; thioesterase-like protein 517856 5455828 Plav_0476 Parvibaculum lavamentivorans DS-1 thioesterase-like protein YP_001411756.1 516963 D 402881 CDS YP_001411757.1 154250933 5456563 517899..518819 1 NC_009719.1 KEGG: hypothetical protein; hypothetical protein 518819 5456563 Plav_0477 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411757.1 517899 D 402881 CDS YP_001411758.1 154250934 5455764 518841..520004 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pol:Bpro_2477 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 520004 5455764 Plav_0478 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001411758.1 518841 D 402881 CDS YP_001411759.1 154250935 5454663 complement(520001..520927) 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: hydrolase, putative; alpha/beta hydrolase fold protein 520927 5454663 Plav_0479 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001411759.1 520001 R 402881 CDS YP_001411760.1 154250936 5455226 complement(520933..522099) 1 NC_009719.1 KEGG: mgi:Mflv_4464 hypothetical protein; hypothetical protein 522099 5455226 Plav_0480 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411760.1 520933 R 402881 CDS YP_001411761.1 154250937 5457035 complement(522104..522916) 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro00366 probable enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 522916 5457035 Plav_0481 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001411761.1 522104 R 402881 CDS YP_001411762.1 154250938 5453898 complement(523011..523517) 1 NC_009719.1 KEGG: mpt:Mpe_A0856 hypothetical protein; hypothetical protein 523517 5453898 Plav_0482 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411762.1 523011 R 402881 CDS YP_001411763.1 154250939 5456244 523586..524374 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hne:HNE_2754 NAD dependent epimerase/dehydratase family protein; short-chain dehydrogenase/reductase SDR 524374 5456244 Plav_0483 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001411763.1 523586 D 402881 CDS YP_001411764.1 154250940 5455116 complement(524574..524855) 1 NC_009719.1 KEGG: har:HEAR1910 hypothetical protein; hypothetical protein 524855 5455116 Plav_0484 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411764.1 524574 R 402881 CDS YP_001411765.1 154250941 5453405 complement(524969..526075) 1 NC_009719.1 KEGG: eli:ELI_11930 glutathione S-transferase; glutathione S-transferase 526075 5453405 Plav_0485 Parvibaculum lavamentivorans DS-1 glutathione S-transferase YP_001411765.1 524969 R 402881 CDS YP_001411766.1 154250942 5455649 complement(526142..527020) 1 NC_009719.1 KEGG: bbr:BB0818 hypothetical protein; hypothetical protein 527020 5455649 Plav_0486 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411766.1 526142 R 402881 CDS YP_001411767.1 154250943 5453463 complement(527057..527437) 1 NC_009719.1 hypothetical protein 527437 5453463 Plav_0487 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411767.1 527057 R 402881 CDS YP_001411768.1 154250944 5453950 527684..527986 1 NC_009719.1 hypothetical protein 527986 5453950 Plav_0488 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411768.1 527684 D 402881 CDS YP_001411769.1 154250945 5456949 complement(528548..529891) 1 NC_009719.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 11; Methyltransferase type 12; SMART: Tetratricopeptide domain protein; KEGG: mag:amb4019 predicted methyltransferase; type 12 methyltransferase 529891 5456949 Plav_0489 Parvibaculum lavamentivorans DS-1 type 12 methyltransferase YP_001411769.1 528548 R 402881 CDS YP_001411770.1 154250946 5456776 complement(530096..530947) 1 NC_009719.1 PFAM: MaoC domain protein dehydratase; KEGG: rpe:RPE_3528 MaoC domain protein dehydratase; 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase 530947 5456776 Plav_0490 Parvibaculum lavamentivorans DS-1 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase YP_001411770.1 530096 R 402881 CDS YP_001411771.1 154250947 5456113 complement(531066..531503) 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: pde:Pden_3220 thioesterase superfamily protein; thioesterase superfamily protein 531503 5456113 Plav_0491 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001411771.1 531066 R 402881 CDS YP_001411772.1 154250948 5454945 complement(531500..532039) 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: hne:HNE_0573 thioesterase family protein; thioesterase superfamily protein 532039 5454945 Plav_0492 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001411772.1 531500 R 402881 CDS YP_001411773.1 154250949 5455306 complement(532127..532612) 1 NC_009719.1 hypothetical protein 532612 5455306 Plav_0493 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411773.1 532127 R 402881 CDS YP_001411774.1 154250950 5454877 532959..534179 1 NC_009719.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: thiolase family protein; acetyl-CoA acetyltransferase 534179 5454877 Plav_0494 Parvibaculum lavamentivorans DS-1 acetyl-CoA acetyltransferase YP_001411774.1 532959 D 402881 CDS YP_001411775.1 154250951 5456772 534364..534804 1 NC_009719.1 PFAM: MaoC domain protein dehydratase; KEGG: rme:Rmet_0946 MaoC-like dehydratase; dehydratase 534804 5456772 Plav_0495 Parvibaculum lavamentivorans DS-1 dehydratase YP_001411775.1 534364 D 402881 CDS YP_001411776.1 154250952 5455519 complement(534801..536003) 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: hne:HNE_1134 acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein 536003 5455519 Plav_0496 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001411776.1 534801 R 402881 CDS YP_001411777.1 154250953 5454598 complement(536029..536946) 1 NC_009719.1 KEGG: nar:Saro_3777 hypothetical protein; hypothetical protein 536946 5454598 Plav_0497 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411777.1 536029 R 402881 CDS YP_001411778.1 154250954 5456826 537073..537699 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: cvi:CV4310 probable transcription regulator, TetR family; TetR family transcriptional regulator 537699 5456826 Plav_0498 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001411778.1 537073 D 402881 CDS YP_001411779.1 154250955 5454670 complement(537704..539062) 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: hne:HNE_1134 acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein 539062 5454670 Plav_0499 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001411779.1 537704 R 402881 CDS YP_001411780.1 154250956 5455760 539263..541089 1 NC_009719.1 PFAM: TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: aeh:Mlg_0921 sodium/hydrogen exchanger; sodium/hydrogen exchanger 541089 5455760 Plav_0500 Parvibaculum lavamentivorans DS-1 sodium/hydrogen exchanger YP_001411780.1 539263 D 402881 CDS YP_001411781.1 154250957 5456063 541167..541937 1 NC_009719.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: hne:HNE_0217 NAD dependent epimerase/dehydratase family; short-chain dehydrogenase/reductase SDR 541937 5456063 Plav_0501 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001411781.1 541167 D 402881 CDS YP_001411782.1 154250958 5456136 complement(541972..542712) 1 NC_009719.1 PFAM: glutamine amidotransferase class-I; KEGG: azo:azo2531 conserved hypothetical protein; glutamine amidotransferase 542712 5456136 Plav_0502 Parvibaculum lavamentivorans DS-1 glutamine amidotransferase YP_001411782.1 541972 R 402881 CDS YP_001411783.1 154250959 5455588 complement(542722..543702) 1 NC_009719.1 TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; KEGG: xcv:XCV0945 putative proline imino-peptidase; proline iminopeptidase 543702 5455588 Plav_0503 Parvibaculum lavamentivorans DS-1 proline iminopeptidase YP_001411783.1 542722 R 402881 CDS YP_001411784.1 154250960 5454915 544034..546019 1 NC_009719.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 546019 5454915 Plav_0504 Parvibaculum lavamentivorans DS-1 ribonucleotide-diphosphate reductase subunit alpha YP_001411784.1 544034 D 402881 CDS YP_001411785.1 154250961 5454596 546114..547073 1 NC_009719.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 547073 nrdF 5454596 nrdF Parvibaculum lavamentivorans DS-1 ribonucleotide-diphosphate reductase subunit beta YP_001411785.1 546114 D 402881 CDS YP_001411786.1 154250962 5454963 547216..547557 1 NC_009719.1 PFAM: histone family protein DNA-binding protein; KEGG: nwi:Nwi_1892 histone-like DNA-binding protein; histone family DNA-binding protein 547557 5454963 Plav_0506 Parvibaculum lavamentivorans DS-1 histone family DNA-binding protein YP_001411786.1 547216 D 402881 CDS YP_001411787.1 154250963 5453417 547625..548641 1 NC_009719.1 KEGG: cps:CPS_3721 putative glycosyl hydrolase; exo-beta-1 3-glucanase-like protein 548641 5453417 Plav_0507 Parvibaculum lavamentivorans DS-1 exo-beta-1 3-glucanase-like protein YP_001411787.1 547625 D 402881 CDS YP_001411788.1 154250964 5454887 complement(548638..549279) 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: rde:RD1_3296 glutathione S-transferase, putative; glutathione S-transferase domain-containing protein 549279 5454887 Plav_0508 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001411788.1 548638 R 402881 CDS YP_001411789.1 154250965 5454891 549661..550569 1 NC_009719.1 PFAM: periplasmic binding protein; KEGG: pde:Pden_1367 periplasmic binding protein; periplasmic-binding protein 550569 5454891 Plav_0509 Parvibaculum lavamentivorans DS-1 periplasmic-binding protein YP_001411789.1 549661 D 402881 CDS YP_001411790.1 154250966 5455282 550571..551572 1 NC_009719.1 PFAM: transport system permease protein; KEGG: bms:BR1345 iron compound ABC transporter, permease protein; transport system permease 551572 5455282 Plav_0510 Parvibaculum lavamentivorans DS-1 transport system permease YP_001411790.1 550571 D 402881 CDS YP_001411791.1 154250967 5455804 551572..552351 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: swi:Swit_0257 ABC transporter related; ABC transporter-like protein 552351 5455804 Plav_0511 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001411791.1 551572 D 402881 CDS YP_001411792.1 154250968 5453947 complement(552465..553574) 1 NC_009719.1 KEGG: abo:ABO_1416 hypothetical protein; hypothetical protein 553574 5453947 Plav_0512 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411792.1 552465 R 402881 CDS YP_001411793.1 154250969 5455547 553710..555137 1 NC_009719.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: atc:AGR_C_2249 blue-light photoreceptor; deoxyribodipyrimidine photo-lyase 555137 5455547 Plav_0513 Parvibaculum lavamentivorans DS-1 deoxyribodipyrimidine photo-lyase YP_001411793.1 553710 D 402881 CDS YP_001411794.1 154250970 5454856 complement(555143..555847) 1 NC_009719.1 KEGG: hne:HNE_1421 hypothetical protein; hypothetical protein 555847 5454856 Plav_0514 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411794.1 555143 R 402881 CDS YP_001411795.1 154250971 5454200 complement(555922..556692) 1 NC_009719.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bba:Bd1632 23S rRNA methyltransferase; tRNA/rRNA methyltransferase SpoU 556692 5454200 Plav_0515 Parvibaculum lavamentivorans DS-1 tRNA/rRNA methyltransferase SpoU YP_001411795.1 555922 R 402881 CDS YP_001411796.1 154250972 5454874 556859..557551 1 NC_009719.1 PFAM: YhhN family protein; KEGG: mlo:mll3549 hypothetical protein; hypothetical protein 557551 5454874 Plav_0516 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411796.1 556859 D 402881 CDS YP_001411797.1 154250973 5456814 557887..558429 1 NC_009719.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rpa:RPA2110 probable transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 558429 5456814 Plav_0517 Parvibaculum lavamentivorans DS-1 helix-turn-helix domain-containing protein YP_001411797.1 557887 D 402881 CDS YP_001411798.1 154250974 5456614 558659..558907 1 NC_009719.1 hypothetical protein 558907 5456614 Plav_0518 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411798.1 558659 D 402881 CDS YP_001411799.1 154250975 5454213 559146..560420 1 NC_009719.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: mes:Meso_0192 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 560420 5454213 Plav_0519 Parvibaculum lavamentivorans DS-1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001411799.1 559146 D 402881 CDS YP_001411800.1 154250976 5454097 560437..560877 1 NC_009719.1 KEGG: mes:Meso_0191 hypothetical protein; hypothetical protein 560877 5454097 Plav_0520 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411800.1 560437 D 402881 CDS YP_001411801.1 154250977 5456569 561111..562406 1 NC_009719.1 PFAM: histidinol dehydrogenase; KEGG: bja:blr1256 histidinol dehydrogenase; histidinol dehydrogenase 562406 5456569 Plav_0521 Parvibaculum lavamentivorans DS-1 histidinol dehydrogenase YP_001411801.1 561111 D 402881 CDS YP_001411802.1 154250978 5455767 562650..563171 1 NC_009719.1 PFAM: conserved hypothetical protein; KEGG: ret:RHE_CH00582 hypothetical protein; hypothetical protein 563171 5455767 Plav_0522 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411802.1 562650 D 402881 CDS YP_001411803.1 154250979 5456738 563174..563656 1 NC_009719.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rru:Rru_A2769 protein tyrosine phosphatase; protein tyrosine phosphatase 563656 5456738 Plav_0523 Parvibaculum lavamentivorans DS-1 protein tyrosine phosphatase YP_001411803.1 563174 D 402881 CDS YP_001411804.1 154250980 5455647 complement(563754..564236) 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sus:Acid_2411 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 564236 5455647 Plav_0524 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001411804.1 563754 R 402881 CDS YP_001411805.1 154250981 5454131 564398..565123 1 NC_009719.1 PFAM: protein of unknown function DUF541; KEGG: maq:Maqu_3473 protein of unknown function DUF541; hypothetical protein 565123 5454131 Plav_0525 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411805.1 564398 D 402881 CDS YP_001411806.1 154250982 5456341 565244..565462 1 NC_009719.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 565462 infA 5456341 infA Parvibaculum lavamentivorans DS-1 translation initiation factor IF-1 YP_001411806.1 565244 D 402881 CDS YP_001411807.1 154250983 5453494 565470..566069 1 NC_009719.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: nar:Saro_1057 maf protein; maf protein 566069 5453494 Plav_0527 Parvibaculum lavamentivorans DS-1 maf protein YP_001411807.1 565470 D 402881 CDS YP_001411808.1 154250984 5454917 566193..567713 1 NC_009719.1 TIGRFAM: ribonuclease, Rne/Rng family; KEGG: gsu:GSU3239 ribonuclease G; ribonuclease 567713 5454917 Plav_0528 Parvibaculum lavamentivorans DS-1 ribonuclease YP_001411808.1 566193 D 402881 CDS YP_001411809.1 154250985 5454232 567729..567956 1 NC_009719.1 PFAM: protein of unknown function DUF329; KEGG: sme:SMc02312 zinc-binding protein; hypothetical protein 567956 5454232 Plav_0529 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411809.1 567729 D 402881 CDS YP_001411810.1 154250986 5456802 568515..569699 1 NC_009719.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rru:Rru_A2050 secretion protein HlyD; RND family efflux transporter MFP subunit 569699 5456802 Plav_0530 Parvibaculum lavamentivorans DS-1 RND family efflux transporter MFP subunit YP_001411810.1 568515 D 402881 CDS YP_001411811.1 154250987 5456447 569749..572883 1 NC_009719.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rru:Rru_A2051 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family protein 572883 5456447 Plav_0531 Parvibaculum lavamentivorans DS-1 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001411811.1 569749 D 402881 CDS YP_001411812.1 154250988 5454429 572880..574307 1 NC_009719.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rru:Rru_A2052 RND efflux system, outer membrane lipoprotein, NodT; RND efflux system outer membrane lipoprotein 574307 5454429 Plav_0532 Parvibaculum lavamentivorans DS-1 RND efflux system outer membrane lipoprotein YP_001411812.1 572880 D 402881 CDS YP_001411813.1 154250989 5453590 574352..574978 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: pat:Patl_0743 transcriptional regulator, TetR family; TetR family transcriptional regulator 574978 5453590 Plav_0533 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001411813.1 574352 D 402881 CDS YP_001411814.1 154250990 5453971 complement(574999..576075) 1 NC_009719.1 TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: mes:Meso_4538 tartrate dehydrogenase; tartrate dehydrogenase 576075 5453971 Plav_0534 Parvibaculum lavamentivorans DS-1 tartrate dehydrogenase YP_001411814.1 574999 R 402881 CDS YP_001411815.1 154250991 5455848 complement(576215..576985) 1 NC_009719.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: swi:Swit_4322 transcriptional regulator, GntR family; GntR family transcriptional regulator 576985 5455848 Plav_0535 Parvibaculum lavamentivorans DS-1 GntR family transcriptional regulator YP_001411815.1 576215 R 402881 CDS YP_001411816.1 154250992 5453912 577130..578461 1 NC_009719.1 TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pae:PA5468 probable citrate transporter; CitMHS family citrate/H+ symporter 578461 5453912 Plav_0536 Parvibaculum lavamentivorans DS-1 CitMHS family citrate/H+ symporter YP_001411816.1 577130 D 402881 CDS YP_001411817.1 154250993 5456822 complement(578475..579476) 1 NC_009719.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: hne:HNE_1475 D-isomer specific 2-hydroxyacid dehydrogenase family protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 579476 5456822 Plav_0537 Parvibaculum lavamentivorans DS-1 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_001411817.1 578475 R 402881 CDS YP_001411818.1 154250994 5453949 579609..581003 1 NC_009719.1 KEGG: hne:HNE_1471 hypothetical protein; hypothetical protein 581003 5453949 Plav_0538 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411818.1 579609 D 402881 CDS YP_001411819.1 154250995 5455483 581000..581311 1 NC_009719.1 KEGG: hne:HNE_1472 hypothetical protein; hypothetical protein 581311 5455483 Plav_0539 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411819.1 581000 D 402881 CDS YP_001411820.1 154250996 5455897 581518..584631 1 NC_009719.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rso:RS05182 putative alpha-amylase-related protein; alpha amylase 584631 5455897 Plav_0540 Parvibaculum lavamentivorans DS-1 alpha amylase YP_001411820.1 581518 D 402881 CDS YP_001411821.1 154250997 5454146 584628..587813 1 NC_009719.1 TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: reu:Reut_B4228 alpha amylase, catalytic subdomain; trehalose synthase 587813 5454146 Plav_0541 Parvibaculum lavamentivorans DS-1 trehalose synthase YP_001411821.1 584628 D 402881 CDS YP_001411822.1 154250998 5456744 587813..590011 1 NC_009719.1 TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; KEGG: rso:RSp0239 glycogen branching enzyme; 1,4-alpha-glucan branching protein 590011 5456744 Plav_0542 Parvibaculum lavamentivorans DS-1 1,4-alpha-glucan branching protein YP_001411822.1 587813 D 402881 CDS YP_001411823.1 154250999 5454854 590008..592122 1 NC_009719.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bxe:Bxe_B2864 putative glycogen operon protein GlgX; glycogen debranching protein GlgX 592122 5454854 Plav_0543 Parvibaculum lavamentivorans DS-1 glycogen debranching protein GlgX YP_001411823.1 590008 D 402881 CDS YP_001411824.1 154251000 5454812 592119..593837 1 NC_009719.1 TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: pfl:PFL_2886 malto-oligosyltrehalose trehalohydrolase; malto-oligosyltrehalose trehalohydrolase 593837 5454812 Plav_0544 Parvibaculum lavamentivorans DS-1 malto-oligosyltrehalose trehalohydrolase YP_001411824.1 592119 D 402881 CDS YP_001411825.1 154251001 5455417 593834..595843 1 NC_009719.1 TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; KEGG: gbe:GbCGDNIH1_0748 4-alpha-glucanotransferase; 4-alpha-glucanotransferase 595843 5455417 Plav_0545 Parvibaculum lavamentivorans DS-1 4-alpha-glucanotransferase YP_001411825.1 593834 D 402881 CDS YP_001411826.1 154251002 5455244 595840..598350 1 NC_009719.1 TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: gbe:GbCGDNIH1_0747 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase; malto-oligosyltrehalose synthase 598350 5455244 Plav_0546 Parvibaculum lavamentivorans DS-1 malto-oligosyltrehalose synthase YP_001411826.1 595840 D 402881 CDS YP_001411827.1 154251003 5455190 598433..598702 1 NC_009719.1 hypothetical protein 598702 5455190 Plav_0547 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411827.1 598433 D 402881 CDS YP_001411828.1 154251004 5455908 complement(598728..599513) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpd:RPD_3208 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 599513 5455908 Plav_0548 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001411828.1 598728 R 402881 CDS YP_001411829.1 154251005 5456784 complement(599588..599947) 1 NC_009719.1 hypothetical protein 599947 5456784 Plav_0549 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411829.1 599588 R 402881 CDS YP_001411830.1 154251006 5454594 complement(600041..600292) 1 NC_009719.1 hypothetical protein 600292 5454594 Plav_0550 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411830.1 600041 R 402881 CDS YP_001411831.1 154251007 5454151 600390..600902 1 NC_009719.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B2908 hypothetical protein; cupin 600902 5454151 Plav_0551 Parvibaculum lavamentivorans DS-1 cupin YP_001411831.1 600390 D 402881 CDS YP_001411832.1 154251008 5455542 complement(600906..602939) 1 NC_009719.1 PFAM: AsmA family protein; KEGG: mag:amb3407 uncharacterized protein involved in outer membrane biogenesis; AsmA family protein 602939 5455542 Plav_0552 Parvibaculum lavamentivorans DS-1 AsmA family protein YP_001411832.1 600906 R 402881 CDS YP_001411833.1 154251009 5455391 603413..605209 1 NC_009719.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mlr5867 ABC transporter, ATP-binding protein exsA; ABC transporter-like protein 605209 5455391 Plav_0553 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001411833.1 603413 D 402881 CDS YP_001411834.1 154251010 5453579 605273..607249 1 NC_009719.1 TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; KEGG: azo:azo2149 putative acetoacetyl-CoA synthase; acetoacetyl-CoA synthase 607249 5453579 Plav_0554 Parvibaculum lavamentivorans DS-1 acetoacetyl-CoA synthase YP_001411834.1 605273 D 402881 CDS YP_001411835.1 154251011 5453583 complement(607246..608187) 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: acr:Acry_1024 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 608187 5453583 Plav_0555 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001411835.1 607246 R 402881 CDS YP_001411836.1 154251012 5453993 608369..609742 1 NC_009719.1 PFAM: sodium:neurotransmitter symporter; KEGG: csa:Csal_3274 sodium:neurotransmitter symporter; sodium:neurotransmitter symporter 609742 5453993 Plav_0556 Parvibaculum lavamentivorans DS-1 sodium:neurotransmitter symporter YP_001411836.1 608369 D 402881 CDS YP_001411837.1 154251013 5456685 610115..610780 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: abo:ABO_0876 transferase; glutathione S-transferase domain-containing protein 610780 5456685 Plav_0557 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001411837.1 610115 D 402881 CDS YP_001411838.1 154251014 5456137 610915..612669 1 NC_009719.1 PFAM: AMP-dependent synthetase and ligase; KEGG: long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase and ligase 612669 5456137 Plav_0558 Parvibaculum lavamentivorans DS-1 AMP-dependent synthetase and ligase YP_001411838.1 610915 D 402881 CDS YP_001411839.1 154251015 5456176 612862..613635 1 NC_009719.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sal:Sala_1855 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 613635 5456176 Plav_0559 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001411839.1 612862 D 402881 CDS YP_001411840.1 154251016 5456473 complement(613783..616536) 1 NC_009719.1 PFAM: glycosyl transferase family 2; KEGG: ppu:PP_1526 beta-(1-3)-glucosyl transferase, putative; glycosyl transferase family protein 616536 5456473 Plav_0560 Parvibaculum lavamentivorans DS-1 glycosyl transferase family protein YP_001411840.1 613783 R 402881 CDS YP_001411841.1 154251017 5454609 complement(616716..618467) 1 NC_009719.1 PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: hne:HNE_3525 amidohydrolase family protein/D-aminoacylase domain protein; amidohydrolase 3 618467 5454609 Plav_0561 Parvibaculum lavamentivorans DS-1 amidohydrolase 3 YP_001411841.1 616716 R 402881 CDS YP_001411842.1 154251018 5454298 618675..619181 1 NC_009719.1 KEGG: nwi:Nwi_2312 hypothetical protein; hypothetical protein 619181 5454298 Plav_0562 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411842.1 618675 D 402881 CDS YP_001411843.1 154251019 5455237 619195..620379 1 NC_009719.1 TIGRFAM: Cytochrome c oxidase subunit II; PFAM: cytochrome c oxidase subunit II; KEGG: rpe:RPE_3865 cytochrome c oxidase, subunit II; cytochrome c oxidase subunit II 620379 5455237 Plav_0563 Parvibaculum lavamentivorans DS-1 cytochrome c oxidase subunit II YP_001411843.1 619195 D 402881 CDS YP_001411844.1 154251020 5456502 620376..622898 1 NC_009719.1 TIGRFAM: Cytochrome c oxidase subunit I type; PFAM: cytochrome c oxidase subunit I; KEGG: nwi:Nwi_2314 cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I type 622898 5456502 Plav_0564 Parvibaculum lavamentivorans DS-1 cytochrome c oxidase subunit I type YP_001411844.1 620376 D 402881 CDS YP_001411845.1 154251021 5455985 622895..623239 1 NC_009719.1 KEGG: rpc:RPC_3851 hypothetical protein; hypothetical protein 623239 5455985 Plav_0565 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411845.1 622895 D 402881 CDS YP_001411846.1 154251022 5455782 complement(623244..624035) 1 NC_009719.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 624035 5455782 Plav_0566 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase YP_001411846.1 623244 R 402881 CDS YP_001411847.1 154251023 5457023 complement(624293..625435) 1 NC_009719.1 PFAM: protein of unknown function DUF819; KEGG: swi:Swit_1697 protein of unknown function DUF819; hypothetical protein 625435 5457023 Plav_0567 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411847.1 624293 R 402881 CDS YP_001411848.1 154251024 5453372 625590..625829 1 NC_009719.1 hypothetical protein 625829 5453372 Plav_0568 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411848.1 625590 D 402881 CDS YP_001411849.1 154251025 5455454 complement(625833..626912) 1 NC_009719.1 KEGG: rru:Rru_A2001 hypothetical protein; hypothetical protein 626912 5455454 Plav_0569 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411849.1 625833 R 402881 CDS YP_001411850.1 154251026 5455255 627055..628632 1 NC_009719.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sma:SAV1259 putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase; AMP-dependent synthetase and ligase 628632 5455255 Plav_0570 Parvibaculum lavamentivorans DS-1 AMP-dependent synthetase and ligase YP_001411850.1 627055 D 402881 CDS YP_001411851.1 154251027 5454448 628736..629935 1 NC_009719.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN0672 multidrug resistance transporter, Bcr/CflA family; Bcr/CflA subfamily drug resistance transporter 629935 5454448 Plav_0571 Parvibaculum lavamentivorans DS-1 Bcr/CflA subfamily drug resistance transporter YP_001411851.1 628736 D 402881 CDS YP_001411852.1 154251028 5453402 complement(630029..630805) 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: swi:Swit_1445 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 630805 5453402 Plav_0572 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001411852.1 630029 R 402881 CDS YP_001411853.1 154251029 5453712 complement(630805..632070) 1 NC_009719.1 PFAM: luciferase family protein; KEGG: swi:Swit_1444 luciferase family protein; luciferase family protein 632070 5453712 Plav_0573 Parvibaculum lavamentivorans DS-1 luciferase family protein YP_001411853.1 630805 R 402881 CDS YP_001411854.1 154251030 5454154 632281..632682 1 NC_009719.1 KEGG: mag:amb1296 hypothetical protein; hypothetical protein 632682 5454154 Plav_0574 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411854.1 632281 D 402881 CDS YP_001411855.1 154251031 5456314 632878..634263 1 NC_009719.1 KEGG: mmr:Mmar10_0269 major facilitator superfamily MFS_1; major facilitator superfamily transporter 634263 5456314 Plav_0575 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001411855.1 632878 D 402881 CDS YP_001411856.1 154251032 5455969 634388..636124 1 NC_009719.1 PFAM: D-aminoacylase domain protein; Amidohydrolase 3; KEGG: hne:HNE_3525 amidohydrolase family protein/D-aminoacylase domain protein; amidohydrolase 3 636124 5455969 Plav_0576 Parvibaculum lavamentivorans DS-1 amidohydrolase 3 YP_001411856.1 634388 D 402881 CDS YP_001411857.1 154251033 5454015 636134..637153 1 NC_009719.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bbr:BB3554 hypothetical protein; taurine catabolism dioxygenase TauD/TfdA 637153 5454015 Plav_0577 Parvibaculum lavamentivorans DS-1 taurine catabolism dioxygenase TauD/TfdA YP_001411857.1 636134 D 402881 CDS YP_001411858.1 154251034 5455291 complement(637160..638044) 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: hydrolase, alpha/beta hydrolase fold family; alpha/beta hydrolase fold protein 638044 5455291 Plav_0578 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001411858.1 637160 R 402881 CDS YP_001411859.1 154251035 5454435 638278..638889 1 NC_009719.1 KEGG: bpa:BPP3905 histone protein; hypothetical protein 638889 5454435 Plav_0579 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411859.1 638278 D 402881 CDS YP_001411860.1 154251036 5456253 639026..639964 1 NC_009719.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: hypothetical protein; 2-nitropropane dioxygenase 639964 5456253 Plav_0580 Parvibaculum lavamentivorans DS-1 2-nitropropane dioxygenase YP_001411860.1 639026 D 402881 CDS YP_001411861.1 154251037 5453414 complement(639969..640511) 1 NC_009719.1 hypothetical protein 640511 5453414 Plav_0581 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411861.1 639969 R 402881 CDS YP_001411862.1 154251038 5453375 641009..641524 1 NC_009719.1 PFAM: S-adenosylmethionine decarboxylase related; KEGG: tcx:Tcr_0272 S-adenosylmethionine decarboxylase related; S-adenosylmethionine decarboxylase-like protein 641524 5453375 Plav_0582 Parvibaculum lavamentivorans DS-1 S-adenosylmethionine decarboxylase-like protein YP_001411862.1 641009 D 402881 CDS YP_001411863.1 154251039 5455615 641524..642396 1 NC_009719.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 642396 5455615 Plav_0583 Parvibaculum lavamentivorans DS-1 spermidine synthase YP_001411863.1 641524 D 402881 CDS YP_001411864.1 154251040 5456674 642535..642738 1 NC_009719.1 hypothetical protein 642738 5456674 Plav_0584 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411864.1 642535 D 402881 CDS YP_001411865.1 154251041 5455951 complement(642761..643252) 1 NC_009719.1 TIGRFAM: regulator of ribonuclease activity A; PFAM: Dimethylmenaquinone methyltransferase; KEGG: reu:Reut_A1963 protein of unknown function 1935; ribonuclease activity A regulator 643252 5455951 Plav_0585 Parvibaculum lavamentivorans DS-1 ribonuclease activity A regulator YP_001411865.1 642761 R 402881 CDS YP_001411866.1 154251042 5454671 643447..644991 1 NC_009719.1 KEGG: pau:PA14_37380 putative flavin-binding monooxygenase; putative flavin-binding monooxygenase 644991 5454671 Plav_0586 Parvibaculum lavamentivorans DS-1 putative flavin-binding monooxygenase YP_001411866.1 643447 D 402881 CDS YP_001411867.1 154251043 5455866 645207..645809 1 NC_009719.1 KEGG: aba:Acid345_2195 hypothetical protein; hypothetical protein 645809 5455866 Plav_0587 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411867.1 645207 D 402881 CDS YP_001411868.1 154251044 5455773 complement(645816..646610) 1 NC_009719.1 PFAM: helix-turn-helix domain protein; KEGG: pmy:Pmen_4350 transcriptional regulator, XRE family; XRE family transcriptional regulator 646610 5455773 Plav_0588 Parvibaculum lavamentivorans DS-1 XRE family transcriptional regulator YP_001411868.1 645816 R 402881 CDS YP_001411869.1 154251045 5454463 646742..647134 1 NC_009719.1 KEGG: pmy:Pmen_4349 hypothetical protein; hypothetical protein 647134 5454463 Plav_0589 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411869.1 646742 D 402881 CDS YP_001411870.1 154251046 5455722 complement(647342..649369) 1 NC_009719.1 SMART: Parallel beta-helix repeat; KEGG: mlo:mll4444 hypothetical protein; parallel beta-helix repeat-containing protein 649369 5455722 Plav_0590 Parvibaculum lavamentivorans DS-1 parallel beta-helix repeat-containing protein YP_001411870.1 647342 R 402881 CDS YP_001411871.1 154251047 5453442 complement(649514..651673) 1 NC_009719.1 KEGG: mlo:mll4444 hypothetical protein; hypothetical protein 651673 5453442 Plav_0591 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411871.1 649514 R 402881 CDS YP_001411872.1 154251048 5454799 complement(651931..653229) 1 NC_009719.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: nha:Nham_1097 isocitrate lyase; isocitrate lyase 653229 5454799 Plav_0592 Parvibaculum lavamentivorans DS-1 isocitrate lyase YP_001411872.1 651931 R 402881 CDS YP_001411873.1 154251049 5454106 complement(653264..654889) 1 NC_009719.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 654889 5454106 Plav_0593 Parvibaculum lavamentivorans DS-1 malate synthase YP_001411873.1 653264 R 402881 CDS YP_001411874.1 154251050 5456318 655081..656526 1 NC_009719.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: bja:bll2454 probable transcriptional regulator; hypothetical protein 656526 5456318 Plav_0594 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411874.1 655081 D 402881 CDS YP_001411875.1 154251051 5455695 complement(656656..657666) 1 NC_009719.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: rde:RD1_0794 cytochrome oxidase, subunit II, putative; cytochrome d ubiquinol oxidase subunit II 657666 5455695 Plav_0595 Parvibaculum lavamentivorans DS-1 cytochrome d ubiquinol oxidase subunit II YP_001411875.1 656656 R 402881 CDS YP_001411876.1 154251052 5455477 complement(657676..659067) 1 NC_009719.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: pde:Pden_4010 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I 659067 5455477 Plav_0596 Parvibaculum lavamentivorans DS-1 cytochrome bd ubiquinol oxidase subunit I YP_001411876.1 657676 R 402881 CDS YP_001411877.1 154251053 5453954 complement(659214..660743) 1 NC_009719.1 PFAM: histidine kinase A domain protein; KEGG: mag:amb0567 signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 660743 5453954 Plav_0597 Parvibaculum lavamentivorans DS-1 PAS/PAC sensor signal transduction histidine kinase YP_001411877.1 659214 R 402881 CDS YP_001411878.1 154251054 5456769 661185..662705 1 NC_009719.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 662705 hisS 5456769 hisS Parvibaculum lavamentivorans DS-1 histidyl-tRNA synthetase YP_001411878.1 661185 D 402881 CDS YP_001411879.1 154251055 5456420 662798..663976 1 NC_009719.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 663976 hisZ 5456420 hisZ Parvibaculum lavamentivorans DS-1 ATP phosphoribosyltransferase regulatory subunit YP_001411879.1 662798 D 402881 CDS YP_001411880.1 154251056 5456633 663973..664950 1 NC_009719.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 664950 hisG 5456633 hisG Parvibaculum lavamentivorans DS-1 ATP phosphoribosyltransferase YP_001411880.1 663973 D 402881 CDS YP_001411881.1 154251057 5456317 664955..665701 1 NC_009719.1 KEGG: hne:HNE_2773 hypothetical protein; hypothetical protein 665701 5456317 Plav_0601 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411881.1 664955 D 402881 CDS YP_001411882.1 154251058 5456988 complement(665684..666511) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: psp:PSPPH_2776 3-oxoacyl-[acyl-carrier protein] reductase; short-chain dehydrogenase/reductase SDR 666511 5456988 Plav_0602 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001411882.1 665684 R 402881 CDS YP_001411883.1 154251059 5454655 complement(666508..667851) 1 NC_009719.1 PFAM: flavin-containing monooxygenase FMO; KEGG: xcv:XCV2088 FAD containing monooxygenase; flavin-containing monooxygenase 667851 5454655 Plav_0603 Parvibaculum lavamentivorans DS-1 flavin-containing monooxygenase YP_001411883.1 666508 R 402881 CDS YP_001411884.1 154251060 5455704 667946..668563 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: mlo:mll3939 transcriptional regulator (TetR-family); TetR family transcriptional regulator 668563 5455704 Plav_0604 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001411884.1 667946 D 402881 CDS YP_001411885.1 154251061 5456878 668959..669756 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: rru:Rru_A1719 thioesterase superfamily; thioesterase superfamily protein 669756 5456878 Plav_0605 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001411885.1 668959 D 402881 CDS YP_001411886.1 154251062 5456182 669815..672106 1 NC_009719.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 672106 5456182 Plav_0606 Parvibaculum lavamentivorans DS-1 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_001411886.1 669815 D 402881 CDS YP_001411887.1 154251063 5455441 672201..672992 1 NC_009719.1 PFAM: protein of unknown function DUF72; KEGG: pde:Pden_4949 protein of unknown function DUF72; hypothetical protein 672992 5455441 Plav_0607 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411887.1 672201 D 402881 CDS YP_001411888.1 154251064 5455307 complement(672989..674251) 1 NC_009719.1 PFAM: glycine hydroxymethyltransferase; KEGG: bja:bll5912 serine hydroxymethyltransferase; glycine hydroxymethyltransferase 674251 5455307 Plav_0608 Parvibaculum lavamentivorans DS-1 glycine hydroxymethyltransferase YP_001411888.1 672989 R 402881 CDS YP_001411889.1 154251065 5454286 complement(674449..675630) 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: hne:HNE_3225 acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein 675630 5454286 Plav_0609 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001411889.1 674449 R 402881 CDS YP_001411890.1 154251066 5454766 complement(675793..677445) 1 NC_009719.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: rpd:RPD_4127 chaperonin GroEL; chaperonin GroEL 677445 5454766 Plav_0610 Parvibaculum lavamentivorans DS-1 chaperonin GroEL YP_001411890.1 675793 R 402881 CDS YP_001411891.1 154251067 5456061 complement(677538..677855) 1 NC_009719.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 677855 groES 5456061 groES Parvibaculum lavamentivorans DS-1 co-chaperonin GroES YP_001411891.1 677538 R 402881 CDS YP_001411892.1 154251068 5455301 complement(678028..678636) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: stp:Strop_1714 regulatory protein, TetR; TetR family transcriptional regulator 678636 5455301 Plav_0612 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001411892.1 678028 R 402881 CDS YP_001411893.1 154251069 5454971 complement(678642..678893) 1 NC_009719.1 hypothetical protein 678893 5454971 Plav_0613 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411893.1 678642 R 402881 CDS YP_001411894.1 154251070 5456537 679035..680180 1 NC_009719.1 PFAM: alanine racemase domain protein; KEGG: sal:Sala_3175 threonine aldolase family protein; alanine racemase domain-containing protein 680180 5456537 Plav_0614 Parvibaculum lavamentivorans DS-1 alanine racemase domain-containing protein YP_001411894.1 679035 D 402881 CDS YP_001411895.1 154251071 5453791 complement(680468..681640) 1 NC_009719.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sme:SMb21148 putative oxidoreductase protein; oxidoreductase domain-containing protein 681640 5453791 Plav_0615 Parvibaculum lavamentivorans DS-1 oxidoreductase domain-containing protein YP_001411895.1 680468 R 402881 CDS YP_001411896.1 154251072 5453825 681834..682988 1 NC_009719.1 PFAM: phosphofructokinase; KEGG: rrs:RoseRS_1831 6-phosphofructokinase; 6-phosphofructokinase 682988 5453825 Plav_0616 Parvibaculum lavamentivorans DS-1 6-phosphofructokinase YP_001411896.1 681834 D 402881 CDS YP_001411897.1 154251073 5455438 complement(683201..683644) 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cps:CPS_2555 acetyltransferase, GNAT family; N-acetyltransferase GCN5 683644 5455438 Plav_0617 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001411897.1 683201 R 402881 CDS YP_001411898.1 154251074 5455233 complement(683674..684768) 1 NC_009719.1 PFAM: aminoglycoside phosphotransferase; KEGG: hypothetical protein; aminoglycoside phosphotransferase 684768 5455233 Plav_0618 Parvibaculum lavamentivorans DS-1 aminoglycoside phosphotransferase YP_001411898.1 683674 R 402881 CDS YP_001411899.1 154251075 5453689 complement(685047..686330) 1 NC_009719.1 TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; KEGG: rpe:RPE_4612 phosphoribosylamine--glycine ligase; phosphoribosylamine--glycine ligase 686330 5453689 Plav_0619 Parvibaculum lavamentivorans DS-1 phosphoribosylamine--glycine ligase YP_001411899.1 685047 R 402881 CDS YP_001411900.1 154251076 5456560 686459..687892 1 NC_009719.1 TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: rpa:RPA1161 putative exonuclease VII, large subunit OB-fold nucleic acid binding domain; exodeoxyribonuclease VII large subunit 687892 5456560 Plav_0620 Parvibaculum lavamentivorans DS-1 exodeoxyribonuclease VII large subunit YP_001411900.1 686459 D 402881 CDS YP_001411901.1 154251077 5455597 687938..688156 1 NC_009719.1 KEGG: rpa:RPA1160 hypothetical protein; hypothetical protein 688156 5455597 Plav_0621 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411901.1 687938 D 402881 CDS YP_001411902.1 154251078 5456845 688153..688995 1 NC_009719.1 PFAM: peptidase M23B; KEGG: sbl:Sbal_2531 peptidase M23B; peptidase M23B 688995 5456845 Plav_0622 Parvibaculum lavamentivorans DS-1 peptidase M23B YP_001411902.1 688153 D 402881 CDS YP_001411903.1 154251079 5456545 complement(688999..689958) 1 NC_009719.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: gbe:GbCGDNIH1_2243 lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis acyltransferase 689958 5456545 Plav_0623 Parvibaculum lavamentivorans DS-1 lipid A biosynthesis acyltransferase YP_001411903.1 688999 R 402881 CDS YP_001411904.1 154251080 5455748 complement(690010..691038) 1 NC_009719.1 TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; KEGG: rsq:Rsph17025_0060 tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4'-kinase 691038 5455748 Plav_0624 Parvibaculum lavamentivorans DS-1 tetraacyldisaccharide 4'-kinase YP_001411904.1 690010 R 402881 CDS YP_001411905.1 154251081 5454098 complement(691031..692338) 1 NC_009719.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: mag:amb4092 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase 692338 5454098 Plav_0625 Parvibaculum lavamentivorans DS-1 3-deoxy-D-manno-octulosonic-acid transferase YP_001411905.1 691031 R 402881 CDS YP_001411906.1 154251082 5453587 complement(692355..693107) 1 NC_009719.1 PFAM: protein of unknown function DUF374; KEGG: mag:amb4091 hypothetical protein; hypothetical protein 693107 5453587 Plav_0626 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411906.1 692355 R 402881 CDS YP_001411907.1 154251083 5455692 complement(693114..694997) 1 NC_009719.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ABC transporter, HlyB/MsbA family; K06147 ATP-binding cassette, subfamily B, bacterial; ABC transporter-like protein 694997 5455692 Plav_0627 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001411907.1 693114 R 402881 CDS YP_001411908.1 154251084 5456370 complement(695132..695650) 1 NC_009719.1 PFAM: TspO/MBR family protein; KEGG: acr:Acry_0012 TspO and MBR like protein; TspO and MBR-like protein 695650 5456370 Plav_0628 Parvibaculum lavamentivorans DS-1 TspO and MBR-like protein YP_001411908.1 695132 R 402881 CDS YP_001411909.1 154251085 5456641 complement(695640..695879) 1 NC_009719.1 KEGG: bra:BRADO6098 hypothetical protein; hypothetical protein 695879 5456641 Plav_0629 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411909.1 695640 R 402881 CDS YP_001411910.1 154251086 5453651 complement(695956..696762) 1 NC_009719.1 PFAM: inositol monophosphatase; KEGG: inositol monophosphatase family protein; inositol-phosphate phosphatase 696762 5453651 Plav_0630 Parvibaculum lavamentivorans DS-1 inositol-phosphate phosphatase YP_001411910.1 695956 R 402881 CDS YP_001411911.1 154251087 5455422 complement(696749..698155) 1 NC_009719.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: nha:Nham_3182 peptidase U62, modulator of DNA gyrase; peptidase U62 modulator of DNA gyrase 698155 5455422 Plav_0631 Parvibaculum lavamentivorans DS-1 peptidase U62 modulator of DNA gyrase YP_001411911.1 696749 R 402881 CDS YP_001411912.1 154251088 5454949 complement(698142..698546) 1 NC_009719.1 KEGG: hne:HNE_1363 hypothetical protein; hypothetical protein 698546 5454949 Plav_0632 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411912.1 698142 R 402881 CDS YP_001411913.1 154251089 5455599 698656..699174 1 NC_009719.1 PFAM: Appr-1-p processing domain protein; KEGG: pde:Pden_3638 Appr-1-p processing domain protein; appr-1-p processing domain-containing protein 699174 5455599 Plav_0633 Parvibaculum lavamentivorans DS-1 appr-1-p processing domain-containing protein YP_001411913.1 698656 D 402881 CDS YP_001411914.1 154251090 5456126 complement(699177..699599) 1 NC_009719.1 PFAM: Class I peptide chain release factor; KEGG: rru:Rru_A0097 class I peptide chain release factor; class I peptide chain release factor 699599 5456126 Plav_0634 Parvibaculum lavamentivorans DS-1 class I peptide chain release factor YP_001411914.1 699177 R 402881 CDS YP_001411915.1 154251091 5454239 699721..700110 1 NC_009719.1 KEGG: ava:Ava_4644 hypothetical protein; hypothetical protein 700110 5454239 Plav_0635 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411915.1 699721 D 402881 CDS YP_001411916.1 154251092 5455989 700110..700493 1 NC_009719.1 KEGG: pen:PSEEN1046 transcriptional regulator; transcriptional regulator 700493 5455989 Plav_0636 Parvibaculum lavamentivorans DS-1 transcriptional regulator YP_001411916.1 700110 D 402881 CDS YP_001411917.1 154251093 5453984 complement(700512..702038) 1 NC_009719.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; UbiD family decarboxylase 702038 5453984 Plav_0637 Parvibaculum lavamentivorans DS-1 UbiD family decarboxylase YP_001411917.1 700512 R 402881 CDS YP_001411918.1 154251094 5455354 702145..702840 1 NC_009719.1 KEGG: ret:RHE_CH00896 hypothetical protein; hypothetical protein 702840 5455354 Plav_0638 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411918.1 702145 D 402881 CDS YP_001411919.1 154251095 5453935 complement(702842..703630) 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: enoyl-CoA hydratase/isomerase family protein; enoyl-CoA hydratase/isomerase 703630 5453935 Plav_0639 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001411919.1 702842 R 402881 CDS YP_001411920.1 154251096 5454838 complement(703767..704438) 1 NC_009719.1 KEGG: bmb:BruAb1_1869 hypothetical protein; hypothetical protein 704438 5454838 Plav_0640 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411920.1 703767 R 402881 CDS YP_001411921.1 154251097 5454959 complement(704435..705373) 1 NC_009719.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: mag:amb0832 FAD synthase; riboflavin biosynthesis protein RibF 705373 5454959 Plav_0641 Parvibaculum lavamentivorans DS-1 riboflavin biosynthesis protein RibF YP_001411921.1 704435 R 402881 CDS YP_001411922.1 154251098 5454017 complement(705479..706351) 1 NC_009719.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mlo:mlr8242 hypothetical protein; HAD family hydrolase 706351 5454017 Plav_0642 Parvibaculum lavamentivorans DS-1 HAD family hydrolase YP_001411922.1 705479 R 402881 CDS YP_001411923.1 154251099 5455407 complement(706635..707204) 1 NC_009719.1 TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein; KEGG: bra:BRADO6080 putative methyltransferase; putative methyltransferase 707204 5455407 Plav_0643 Parvibaculum lavamentivorans DS-1 putative methyltransferase YP_001411923.1 706635 R 402881 CDS YP_001411924.1 154251100 5456906 complement(707179..708162) 1 NC_009719.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rpb:RPB_1171 pseudouridine synthase, Rsu; RNA-binding S4 domain-containing protein 708162 5456906 Plav_0644 Parvibaculum lavamentivorans DS-1 RNA-binding S4 domain-containing protein YP_001411924.1 707179 R 402881 CDS YP_001411925.1 154251101 5456846 708212..708706 1 NC_009719.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mes:Meso_0427 CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase 708706 5456846 Plav_0645 Parvibaculum lavamentivorans DS-1 zinc-binding CMP/dCMP deaminase YP_001411925.1 708212 D 402881 CDS YP_001411926.1 154251102 5453630 708835..710073 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein 710073 5453630 Plav_0646 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001411926.1 708835 D 402881 CDS YP_001411927.1 154251103 5456193 710164..710856 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: bmb:BruAb1_0852 glutathione S-transferase family protein; glutathione S-transferase domain-containing protein 710856 5456193 Plav_0647 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001411927.1 710164 D 402881 CDS YP_001411928.1 154251104 5456720 complement(710860..712845) 1 NC_009719.1 KEGG: bbt:BBta_3094 putative two-component sensor histidine kinase with a ATP-binding domain (C-term); TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 712845 5456720 Plav_0648 Parvibaculum lavamentivorans DS-1 PAS/PAC sensor signal transduction histidine kinase YP_001411928.1 710860 R 402881 CDS YP_001411929.1 154251105 5453859 complement(712996..714066) 1 NC_009719.1 PFAM: aminoglycoside phosphotransferase; KEGG: reh:H16_A1099 predicted aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 714066 5453859 Plav_0649 Parvibaculum lavamentivorans DS-1 aminoglycoside phosphotransferase YP_001411929.1 712996 R 402881 CDS YP_001411930.1 154251106 5456009 complement(714157..715176) 1 NC_009719.1 PFAM: fatty acid desaturase; KEGG: bja:blr4081 hypothetical protein; fatty acid desaturase 715176 5456009 Plav_0650 Parvibaculum lavamentivorans DS-1 fatty acid desaturase YP_001411930.1 714157 R 402881 CDS YP_001411931.1 154251107 5456530 complement(715173..715829) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: maq:Maqu_3581 transcriptional regulator, TetR family; TetR family transcriptional regulator 715829 5456530 Plav_0651 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001411931.1 715173 R 402881 CDS YP_001411932.1 154251108 5454264 716313..717584 1 NC_009719.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: aba:Acid345_3460 major facilitator superfamily (MFS) transporter; major facilitator superfamily transporter 717584 5454264 Plav_0652 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001411932.1 716313 D 402881 CDS YP_001411933.1 154251109 5455747 complement(717581..718603) 1 NC_009719.1 TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: rru:Rru_A0572 4-hydroxybenzoate polyprenyl transferase; 4-hydroxybenzoate polyprenyltransferase 718603 5455747 Plav_0653 Parvibaculum lavamentivorans DS-1 4-hydroxybenzoate polyprenyltransferase YP_001411933.1 717581 R 402881 CDS YP_001411934.1 154251110 5453508 complement(718674..719168) 1 NC_009719.1 PFAM: NUDIX hydrolase; KEGG: sco:SCO5600 hypothetical protein; NUDIX hydrolase 719168 5453508 Plav_0654 Parvibaculum lavamentivorans DS-1 NUDIX hydrolase YP_001411934.1 718674 R 402881 CDS YP_001411935.1 154251111 5453853 719351..719872 1 NC_009719.1 hypothetical protein 719872 5453853 Plav_0655 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411935.1 719351 D 402881 CDS YP_001411936.1 154251112 5455325 720153..720947 1 NC_009719.1 PFAM: protein of unknown function DUF558; KEGG: mlo:mll6903 hypothetical protein; hypothetical protein 720947 5455325 Plav_0656 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411936.1 720153 D 402881 CDS YP_001411937.1 154251113 5454328 721071..721661 1 NC_009719.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: mlo:mll1286 probable NAD(P)H dehydrogenase; NAD(P)H dehydrogenase (quinone) 721661 5454328 Plav_0657 Parvibaculum lavamentivorans DS-1 NAD(P)H dehydrogenase (quinone) YP_001411937.1 721071 D 402881 CDS YP_001411938.1 154251114 5456651 722114..723484 1 NC_009719.1 TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GCS2; KEGG: rru:Rru_A0570 glutamate--cysteine ligase; glutamate--cysteine ligase 723484 5456651 Plav_0658 Parvibaculum lavamentivorans DS-1 glutamate--cysteine ligase YP_001411938.1 722114 D 402881 CDS YP_001411939.1 154251115 5456213 723694..724077 1 NC_009719.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bte:BTH_II0667 glyoxalase family protein family; glyoxalase/bleomycin resistance protein/dioxygenase 724077 5456213 Plav_0659 Parvibaculum lavamentivorans DS-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001411939.1 723694 D 402881 CDS YP_001411940.1 154251116 5456344 724135..724377 1 NC_009719.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: bcn:Bcen_4816 transcriptional regulator, AbrB family; AbrB family transcriptional regulator 724377 5456344 Plav_0660 Parvibaculum lavamentivorans DS-1 AbrB family transcriptional regulator YP_001411940.1 724135 D 402881 CDS YP_001411941.1 154251117 5454702 724374..724784 1 NC_009719.1 KEGG: rpc:RPC_3693 PilT protein-like; Pil-like protein 724784 5454702 Plav_0661 Parvibaculum lavamentivorans DS-1 Pil-like protein YP_001411941.1 724374 D 402881 CDS YP_001411942.1 154251118 5454143 724785..725288 1 NC_009719.1 KEGG: fal:FRAAL4218 putative DNA topology modulation protein FlaR; putative DNA topology modulation protein FlaR 725288 5454143 Plav_0662 Parvibaculum lavamentivorans DS-1 putative DNA topology modulation protein FlaR YP_001411942.1 724785 D 402881 CDS YP_001411943.1 154251119 5456471 complement(725292..725804) 1 NC_009719.1 PFAM: DinB family protein; KEGG: rfr:Rfer_0154 DinB; DinB family protein 725804 5456471 Plav_0663 Parvibaculum lavamentivorans DS-1 DinB family protein YP_001411943.1 725292 R 402881 CDS YP_001411944.1 154251120 5455141 725969..726388 1 NC_009719.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: sdn:Sden_2391 cupin 2, conserved barrel; cupin 726388 5455141 Plav_0664 Parvibaculum lavamentivorans DS-1 cupin YP_001411944.1 725969 D 402881 CDS YP_001411945.1 154251121 5456119 complement(726385..727197) 1 NC_009719.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mxa:MXAN_6479 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 727197 5456119 Plav_0665 Parvibaculum lavamentivorans DS-1 helix-turn-helix domain-containing protein YP_001411945.1 726385 R 402881 CDS YP_001411946.1 154251122 5456410 complement(727245..728678) 1 NC_009719.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: mes:Meso_0739 peptidase U62, modulator of DNA gyrase; peptidase U62 modulator of DNA gyrase 728678 5456410 Plav_0666 Parvibaculum lavamentivorans DS-1 peptidase U62 modulator of DNA gyrase YP_001411946.1 727245 R 402881 CDS YP_001411947.1 154251123 5453943 complement(728753..729148) 1 NC_009719.1 hypothetical protein 729148 5453943 Plav_0667 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411947.1 728753 R 402881 CDS YP_001411948.1 154251124 5453918 729224..729610 1 NC_009719.1 hypothetical protein 729610 5453918 Plav_0668 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411948.1 729224 D 402881 CDS YP_001411949.1 154251125 5456762 729613..730452 1 NC_009719.1 TIGRFAM: Cytochrome c oxidase subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; KEGG: nha:Nham_3463 cytochrome-c oxidase; cytochrome c oxidase subunit II 730452 5456762 Plav_0669 Parvibaculum lavamentivorans DS-1 cytochrome c oxidase subunit II YP_001411949.1 729613 D 402881 CDS YP_001411950.1 154251126 5456777 730509..732116 1 NC_009719.1 TIGRFAM: Cytochrome c oxidase subunit I type; PFAM: cytochrome c oxidase subunit I; KEGG: rpb:RPB_4587 cytochrome-c oxidase; cytochrome c oxidase subunit I type 732116 5456777 Plav_0670 Parvibaculum lavamentivorans DS-1 cytochrome c oxidase subunit I type YP_001411950.1 730509 D 402881 CDS YP_001411951.1 154251127 5456375 732192..733148 1 NC_009719.1 TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; KEGG: rle:RL1023 putative protoheme IX farnesyltransferase (heme o synthase); protoheme IX farnesyltransferase 733148 5456375 Plav_0671 Parvibaculum lavamentivorans DS-1 protoheme IX farnesyltransferase YP_001411951.1 732192 D 402881 CDS YP_001411952.1 154251128 5455606 733156..733338 1 NC_009719.1 hypothetical protein 733338 5455606 Plav_0672 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411952.1 733156 D 402881 CDS YP_001411953.1 154251129 5455151 733462..734301 1 NC_009719.1 PFAM: cytochrome c oxidase subunit III; KEGG: sme:SMc00013 cytochrome c oxidase subunit III; cytochrome c oxidase subunit III 734301 5455151 Plav_0673 Parvibaculum lavamentivorans DS-1 cytochrome c oxidase subunit III YP_001411953.1 733462 D 402881 CDS YP_001411954.1 154251130 5455373 734382..734768 1 NC_009719.1 PFAM: protein of unknown function DUF983; KEGG: atc:AGR_C_1409 hypothetical protein; hypothetical protein 734768 5455373 Plav_0674 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411954.1 734382 D 402881 CDS YP_001411955.1 154251131 5453636 734765..735505 1 NC_009719.1 PFAM: Surfeit locus 1 family protein; KEGG: bra:BRADO1723 putative SURF1 family protein; surfeit locus 1 family protein 735505 5453636 Plav_0675 Parvibaculum lavamentivorans DS-1 surfeit locus 1 family protein YP_001411955.1 734765 D 402881 CDS YP_001411956.1 154251132 5454105 735502..736995 1 NC_009719.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: rru:Rru_A3232 thermostable carboxypeptidase 1; carboxypeptidase Taq 736995 5454105 Plav_0676 Parvibaculum lavamentivorans DS-1 carboxypeptidase Taq YP_001411956.1 735502 D 402881 CDS YP_001411957.1 154251133 5453878 737109..738512 1 NC_009719.1 TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rsh:Rsph17029_0480 threonine synthase; threonine synthase 738512 5453878 Plav_0677 Parvibaculum lavamentivorans DS-1 threonine synthase YP_001411957.1 737109 D 402881 CDS YP_001411958.1 154251134 5455482 738577..739851 1 NC_009719.1 PFAM: peptidase M16 domain protein; KEGG: sil:SPO3070 peptidase, M16 family; peptidase M16 domain-containing protein 739851 5455482 Plav_0678 Parvibaculum lavamentivorans DS-1 peptidase M16 domain-containing protein YP_001411958.1 738577 D 402881 CDS YP_001411959.1 154251135 5455423 739911..740498 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nwi:Nwi_0231 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 740498 5455423 Plav_0679 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001411959.1 739911 D 402881 CDS YP_001411960.1 154251136 5454693 740518..743493 1 NC_009719.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: rpb:RPB_4495 diguanylate cyclase/phosphodiesterase; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 743493 5454693 Plav_0680 Parvibaculum lavamentivorans DS-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001411960.1 740518 D 402881 CDS YP_001411961.1 154251137 5456766 complement(743496..744113) 1 NC_009719.1 PFAM: protein of unknown function DUF179; KEGG: bja:blr1492 putative transcriptional regulator; hypothetical protein 744113 5456766 Plav_0681 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411961.1 743496 R 402881 CDS YP_001411962.1 154251138 5454859 744252..745124 1 NC_009719.1 KEGG: sil:SPO0295 hypothetical protein; hypothetical protein 745124 5454859 Plav_0682 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411962.1 744252 D 402881 CDS YP_001411963.1 154251139 5455182 745229..745717 1 NC_009719.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: AhpC/TSA family protein; redoxin domain-containing protein 745717 5455182 Plav_0683 Parvibaculum lavamentivorans DS-1 redoxin domain-containing protein YP_001411963.1 745229 D 402881 CDS YP_001411964.1 154251140 5455596 complement(745763..746215) 1 NC_009719.1 PFAM: ribonuclease H; KEGG: bra:BRADO6586 ribonuclease H (RNase H); ribonuclease H 746215 5455596 Plav_0684 Parvibaculum lavamentivorans DS-1 ribonuclease H YP_001411964.1 745763 R 402881 CDS YP_001411965.1 154251141 5456985 complement(746212..747177) 1 NC_009719.1 TIGRFAM: homoserine kinase; PFAM: aminoglycoside phosphotransferase; KEGG: sme:SMc00017 putative homoserine kinase protein; homoserine kinase 747177 5456985 Plav_0685 Parvibaculum lavamentivorans DS-1 homoserine kinase YP_001411965.1 746212 R 402881 CDS YP_001411966.1 154251142 5454136 complement(747189..748145) 1 NC_009719.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; KEGG: mmr:Mmar10_2215 hydroxymethylbutenyl pyrophosphate reductase; hydroxymethylbutenyl pyrophosphate reductase 748145 5454136 Plav_0686 Parvibaculum lavamentivorans DS-1 hydroxymethylbutenyl pyrophosphate reductase YP_001411966.1 747189 R 402881 CDS YP_001411967.1 154251143 5455636 748445..749059 1 NC_009719.1 KEGG: rru:Rru_A3052 hypothetical protein; hypothetical protein 749059 5455636 Plav_0687 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411967.1 748445 D 402881 CDS YP_001411968.1 154251144 5454814 749450..750592 1 NC_009719.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mag:amb0766 glycine cleavage system T protein; glycine cleavage system T protein 750592 5454814 Plav_0688 Parvibaculum lavamentivorans DS-1 glycine cleavage system T protein YP_001411968.1 749450 D 402881 CDS YP_001411969.1 154251145 5456430 750626..751003 1 NC_009719.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 751003 5456430 Plav_0689 Parvibaculum lavamentivorans DS-1 glycine cleavage system protein H YP_001411969.1 750626 D 402881 CDS YP_001411970.1 154251146 5455940 751029..752375 1 NC_009719.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 752375 5455940 Plav_0690 Parvibaculum lavamentivorans DS-1 glycine dehydrogenase subunit 1 YP_001411970.1 751029 D 402881 CDS YP_001411971.1 154251147 5455714 752376..753956 1 NC_009719.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 753956 5455714 Plav_0691 Parvibaculum lavamentivorans DS-1 glycine dehydrogenase subunit 2 YP_001411971.1 752376 D 402881 CDS YP_001411972.1 154251148 5455230 753958..754521 1 NC_009719.1 PFAM: protein of unknown function DUF925; KEGG: bja:bll1166 hypothetical protein; hypothetical protein 754521 5455230 Plav_0692 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411972.1 753958 D 402881 CDS YP_001411973.1 154251149 5456091 complement(754518..755300) 1 NC_009719.1 PFAM: dienelactone hydrolase; KEGG: mxa:MXAN_1666 hypothetical protein; dienelactone hydrolase 755300 5456091 Plav_0693 Parvibaculum lavamentivorans DS-1 dienelactone hydrolase YP_001411973.1 754518 R 402881 CDS YP_001411974.1 154251150 5455678 complement(755420..755905) 1 NC_009719.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: mag:amb3996 ATP synthase B chain precursor; H+transporting two-sector ATPase subunit B/B' 755905 5455678 Plav_0694 Parvibaculum lavamentivorans DS-1 H+transporting two-sector ATPase subunit B/B' YP_001411974.1 755420 R 402881 CDS YP_001411975.1 154251151 5455189 complement(755924..756487) 1 NC_009719.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: mes:Meso_0698 H+-transporting two-sector ATPase, B/B' subunit; H+transporting two-sector ATPase subunit B/B' 756487 5455189 Plav_0695 Parvibaculum lavamentivorans DS-1 H+transporting two-sector ATPase subunit B/B' YP_001411975.1 755924 R 402881 CDS YP_001411976.1 154251152 5456431 complement(756561..756785) 1 NC_009719.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 756785 5456431 Plav_0696 Parvibaculum lavamentivorans DS-1 F0F1 ATP synthase subunit C YP_001411976.1 756561 R 402881 CDS YP_001411977.1 154251153 5454593 complement(756881..757663) 1 NC_009719.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 757663 5454593 Plav_0697 Parvibaculum lavamentivorans DS-1 F0F1 ATP synthase subunit A YP_001411977.1 756881 R 402881 CDS YP_001411978.1 154251154 5456819 complement(757679..758104) 1 NC_009719.1 KEGG: mag:amb3992 ATP synthase protein I; hypothetical protein 758104 5456819 Plav_0698 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411978.1 757679 R 402881 CDS YP_001411979.1 154251155 5456003 complement(758363..761824) 1 NC_009719.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: mes:Meso_0768 chromosome segregation protein SMC; chromosome segregation protein SMC 761824 5456003 Plav_0699 Parvibaculum lavamentivorans DS-1 chromosome segregation protein SMC YP_001411979.1 758363 R 402881 CDS YP_001411980.1 154251156 5455784 complement(761898..762629) 1 NC_009719.1 PFAM: DSBA oxidoreductase; KEGG: bmb:BruAb1_0518 twin-arginine translocation signal domain protein; DSBA oxidoreductase 762629 5455784 Plav_0700 Parvibaculum lavamentivorans DS-1 DSBA oxidoreductase YP_001411980.1 761898 R 402881 CDS YP_001411981.1 154251157 5454570 762662..764509 1 NC_009719.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; KEGG: mag:amb3984 A/G-specific DNA glycosylase; A/G-specific adenine glycosylase 764509 5454570 Plav_0701 Parvibaculum lavamentivorans DS-1 A/G-specific adenine glycosylase YP_001411981.1 762662 D 402881 CDS YP_001411982.1 154251158 5454912 complement(764710..765813) 1 NC_009719.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: modification methylase CcrMI; DNA methylase N-4/N-6 domain-containing protein 765813 5454912 Plav_0702 Parvibaculum lavamentivorans DS-1 DNA methylase N-4/N-6 domain-containing protein YP_001411982.1 764710 R 402881 CDS YP_001411983.1 154251159 5455960 complement(765871..766680) 1 NC_009719.1 PFAM: ribonuclease HII/HIII; KEGG: swi:Swit_4574 ribonuclease H; ribonuclease H 766680 5455960 Plav_0703 Parvibaculum lavamentivorans DS-1 ribonuclease H YP_001411983.1 765871 R 402881 CDS YP_001411984.1 154251160 5455527 complement(766718..767548) 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: hne:HNE_3365 chloride peroxidase; alpha/beta hydrolase fold protein 767548 5455527 Plav_0704 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001411984.1 766718 R 402881 CDS YP_001411985.1 154251161 5454700 767794..768264 1 NC_009719.1 PFAM: regulatory protein MarR; Penicillinase repressor; KEGG: hne:HNE_3364 transcriptional regulator, MarR family; MarR family transcriptional regulator 768264 5454700 Plav_0705 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001411985.1 767794 D 402881 CDS YP_001411986.1 154251162 5454572 complement(768342..768647) 1 NC_009719.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: eli:ELI_03135 hypothetical protein; excinuclease ABC subunit C 768647 5454572 Plav_0706 Parvibaculum lavamentivorans DS-1 excinuclease ABC subunit C YP_001411986.1 768342 R 402881 CDS YP_001411987.1 154251163 5453631 complement(768698..769963) 1 NC_009719.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: nha:Nham_3222 radical SAM; radical SAM domain-containing protein 769963 5453631 Plav_0707 Parvibaculum lavamentivorans DS-1 radical SAM domain-containing protein YP_001411987.1 768698 R 402881 CDS YP_001411988.1 154251164 5454075 770094..770801 1 NC_009719.1 PFAM: glycosyl transferase family 2; KEGG: bbt:BBta_3382 putative glycosyl transferase, group 2 family protein; glycosyl transferase family protein 770801 5454075 Plav_0708 Parvibaculum lavamentivorans DS-1 glycosyl transferase family protein YP_001411988.1 770094 D 402881 CDS YP_001411989.1 154251165 5454254 770807..771406 1 NC_009719.1 KEGG: rde:RD1_0184 hypothetical protein; hypothetical protein 771406 5454254 Plav_0709 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001411989.1 770807 D 402881 CDS YP_001411990.1 154251166 5453855 771481..771750 1 NC_009719.1 TIGRFAM: putative addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: pde:Pden_3830 putative transcriptional regulators, CopG/Arc/MetJ family; CopG/Arc/MetJ family transcriptional regulator 771750 5453855 Plav_0710 Parvibaculum lavamentivorans DS-1 CopG/Arc/MetJ family transcriptional regulator YP_001411990.1 771481 D 402881 CDS YP_001411991.1 154251167 5455385 771747..772049 1 NC_009719.1 PFAM: plasmid stabilization system; KEGG: mbo:Mb1994c hypothetical protein; plasmid stabilization system protein 772049 5455385 Plav_0711 Parvibaculum lavamentivorans DS-1 plasmid stabilization system protein YP_001411991.1 771747 D 402881 CDS YP_001411992.1 154251168 5455553 complement(772078..772506) 1 NC_009719.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 772506 mscL 5455553 mscL Parvibaculum lavamentivorans DS-1 large-conductance mechanosensitive channel YP_001411992.1 772078 R 402881 CDS YP_001411993.1 154251169 5453472 complement(772587..773126) 1 NC_009719.1 TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: nwi:Nwi_2601 molybdopterin biosynthesis protein B; molybdenum cofactor biosynthesis protein B 773126 5453472 Plav_0713 Parvibaculum lavamentivorans DS-1 molybdenum cofactor biosynthesis protein B YP_001411993.1 772587 R 402881 CDS YP_001411994.1 154251170 5454188 complement(773348..776557) 1 NC_009719.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mpt:Mpe_A0868 AcrB/AcrD/AcrF family protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 776557 5454188 Plav_0714 Parvibaculum lavamentivorans DS-1 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001411994.1 773348 R 402881 CDS YP_001411995.1 154251171 5454123 complement(776708..777922) 1 NC_009719.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aav:Aave_1362 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 777922 5454123 Plav_0715 Parvibaculum lavamentivorans DS-1 RND family efflux transporter MFP subunit YP_001411995.1 776708 R 402881 CDS YP_001411996.1 154251172 5456093 778124..778711 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: rpa:RPA3021 probable transcriptional regulator TetR family; TetR family transcriptional regulator 778711 5456093 Plav_0716 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001411996.1 778124 D 402881 CDS YP_001411997.1 154251173 5456416 complement(778715..780565) 1 NC_009719.1 PFAM: Lytic transglycosylase catalytic; KEGG: mag:amb4398 soluble lytic murein transglycosylase and related regulatory protein; lytic transglycosylase catalytic subunit 780565 5456416 Plav_0717 Parvibaculum lavamentivorans DS-1 lytic transglycosylase catalytic subunit YP_001411997.1 778715 R 402881 CDS YP_001411998.1 154251174 5456881 complement(780642..781514) 1 NC_009719.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: mlo:mll7705 putative DNA polymerase bacteriophage-type; phage SPO1 DNA polymerase-like protein 781514 5456881 Plav_0718 Parvibaculum lavamentivorans DS-1 phage SPO1 DNA polymerase-like protein YP_001411998.1 780642 R 402881 CDS YP_001411999.1 154251175 5453433 781763..783436 1 NC_009719.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: electrotransfer ubiquinone oxidoreductase, putative; electron-transferring-flavoprotein dehydrogenase 783436 5453433 Plav_0719 Parvibaculum lavamentivorans DS-1 electron-transferring-flavoprotein dehydrogenase YP_001411999.1 781763 D 402881 CDS YP_001412000.1 154251176 5455852 783574..785361 1 NC_009719.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpc:RPC_4357 tetratricopeptide TPR_2; hypothetical protein 785361 5455852 Plav_0720 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412000.1 783574 D 402881 CDS YP_001412001.1 154251177 5454644 785366..786238 1 NC_009719.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: mag:amb4435 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 786238 5454644 Plav_0721 Parvibaculum lavamentivorans DS-1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001412001.1 785366 D 402881 CDS YP_001412002.1 154251178 5456608 complement(786235..787254) 1 NC_009719.1 PFAM: Polyprenyl synthetase; KEGG: rpb:RPB_1088 farnesyltranstransferase; polyprenyl synthetase 787254 5456608 Plav_0722 Parvibaculum lavamentivorans DS-1 polyprenyl synthetase YP_001412002.1 786235 R 402881 CDS YP_001412003.1 154251179 5457046 787479..787694 1 NC_009719.1 KEGG: pde:Pden_2030 hypothetical protein; hypothetical protein 787694 5457046 Plav_0723 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412003.1 787479 D 402881 CDS YP_001412004.1 154251180 5456620 787691..788473 1 NC_009719.1 KEGG: mag:amb2163 predicted O-methyltransferase; O-methyltransferase 788473 5456620 Plav_0724 Parvibaculum lavamentivorans DS-1 O-methyltransferase YP_001412004.1 787691 D 402881 CDS YP_001412005.1 154251181 5454014 788516..789418 1 NC_009719.1 PFAM: peptidase S49; KEGG: rpa:RPA1043 possible protease SohB; peptidase S49 789418 5454014 Plav_0725 Parvibaculum lavamentivorans DS-1 peptidase S49 YP_001412005.1 788516 D 402881 CDS YP_001412006.1 154251182 5456048 789466..789666 1 NC_009719.1 hypothetical protein 789666 5456048 Plav_0726 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412006.1 789466 D 402881 CDS YP_001412007.1 154251183 5453782 789831..790724 1 NC_009719.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 790724 glyQ 5453782 glyQ Parvibaculum lavamentivorans DS-1 glycyl-tRNA synthetase subunit alpha YP_001412007.1 789831 D 402881 CDS YP_001412008.1 154251184 5455239 790721..792946 1 NC_009719.1 TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: rpe:RPE_4409 glycine--tRNA ligase; glycyl-tRNA synthetase subunit beta 792946 5455239 Plav_0728 Parvibaculum lavamentivorans DS-1 glycyl-tRNA synthetase subunit beta YP_001412008.1 790721 D 402881 CDS YP_001412009.1 154251185 5457011 793012..795780 1 NC_009719.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 795780 5457011 Plav_0729 Parvibaculum lavamentivorans DS-1 pyruvate phosphate dikinase YP_001412009.1 793012 D 402881 CDS YP_001412010.1 154251186 5456467 796241..796978 1 NC_009719.1 PFAM: cell wall hydrolase SleB; KEGG: hne:HNE_0687 putative hydrolase domain protein; cell wall hydrolase SleB 796978 5456467 Plav_0730 Parvibaculum lavamentivorans DS-1 cell wall hydrolase SleB YP_001412010.1 796241 D 402881 CDS YP_001412011.1 154251187 5456241 complement(797004..797828) 1 NC_009719.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mav:MAV_2820 short chain dehydrogenase; short chain dehydrogenase 797828 5456241 Plav_0731 Parvibaculum lavamentivorans DS-1 short chain dehydrogenase YP_001412011.1 797004 R 402881 CDS YP_001412012.1 154251188 5456155 complement(797900..798769) 1 NC_009719.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; KEGG: gbe:GbCGDNIH1_0642 nicotinate-nucleotide pyrophosphorylase (carboxylating); nicotinate-nucleotide pyrophosphorylase 798769 5456155 Plav_0732 Parvibaculum lavamentivorans DS-1 nicotinate-nucleotide pyrophosphorylase YP_001412012.1 797900 R 402881 CDS YP_001412013.1 154251189 5454026 complement(798766..800379) 1 NC_009719.1 TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: rpc:RPC_4339 L-aspartate oxidase; L-aspartate oxidase 800379 5454026 Plav_0733 Parvibaculum lavamentivorans DS-1 L-aspartate oxidase YP_001412013.1 798766 R 402881 CDS YP_001412014.1 154251190 5454481 complement(800407..801483) 1 NC_009719.1 TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; KEGG: rpd:RPD_1229 quinolinate synthetase complex, A subunit; quinolinate synthetase complex subunit A 801483 5454481 Plav_0734 Parvibaculum lavamentivorans DS-1 quinolinate synthetase complex subunit A YP_001412014.1 800407 R 402881 CDS YP_001412015.1 154251191 5455696 complement(801671..802045) 1 NC_009719.1 hypothetical protein 802045 5455696 Plav_0735 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412015.1 801671 R 402881 CDS YP_001412016.1 154251192 5454734 complement(802061..803116) 1 NC_009719.1 KEGG: rpe:RPE_4395 hypothetical protein; hypothetical protein 803116 5454734 Plav_0736 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412016.1 802061 R 402881 CDS YP_001412017.1 154251193 5454792 complement(803124..803672) 1 NC_009719.1 KEGG: bbt:BBta_2370 hypothetical protein; hypothetical protein 803672 5454792 Plav_0737 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412017.1 803124 R 402881 CDS YP_001412018.1 154251194 5453958 803843..804655 1 NC_009719.1 PFAM: dienelactone hydrolase; KEGG: mmr:Mmar10_2929 dienelactone hydrolase; dienelactone hydrolase 804655 5453958 Plav_0738 Parvibaculum lavamentivorans DS-1 dienelactone hydrolase YP_001412018.1 803843 D 402881 CDS YP_001412019.1 154251195 5455642 complement(804659..805270) 1 NC_009719.1 KEGG: bov:BOV_0659 hypothetical protein; hypothetical protein 805270 5455642 Plav_0739 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412019.1 804659 R 402881 CDS YP_001412020.1 154251196 5455206 805429..807960 1 NC_009719.1 PFAM: peptidase S16 lon domain protein; KEGG: rxy:Rxyl_1929 ATP-dependent protease, putative; peptidase S16 lon domain-containing protein 807960 5455206 Plav_0740 Parvibaculum lavamentivorans DS-1 peptidase S16 lon domain-containing protein YP_001412020.1 805429 D 402881 CDS YP_001412021.1 154251197 5456448 807960..808832 1 NC_009719.1 KEGG: rxy:Rxyl_1928 hypothetical protein; hypothetical protein 808832 5456448 Plav_0741 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412021.1 807960 D 402881 CDS YP_001412022.1 154251198 5454142 808834..809694 1 NC_009719.1 PFAM: UspA domain protein; KEGG: mag:amb1529 universal stress protein UspA and related nucleotide-binding protein; UspA domain-containing protein 809694 5454142 Plav_0742 Parvibaculum lavamentivorans DS-1 UspA domain-containing protein YP_001412022.1 808834 D 402881 CDS YP_001412023.1 154251199 5455143 809725..810096 1 NC_009719.1 KEGG: mmr:Mmar10_0797 hypothetical protein; hypothetical protein 810096 5455143 Plav_0743 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412023.1 809725 D 402881 CDS YP_001412024.1 154251200 5456653 complement(810127..811251) 1 NC_009719.1 catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 811251 5456653 Plav_0744 Parvibaculum lavamentivorans DS-1 3-oxoacyl-ACP synthase YP_001412024.1 810127 R 402881 CDS YP_001412025.1 154251201 5455502 811415..812086 1 NC_009719.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: sat:SYN_03000 pyridoxamine phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 812086 5455502 Plav_0745 Parvibaculum lavamentivorans DS-1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001412025.1 811415 D 402881 CDS YP_001412026.1 154251202 5455275 complement(812087..812758) 1 NC_009719.1 PFAM: protein of unknown function DUF583; KEGG: ajs:Ajs_0600 protein of unknown function DUF583; hypothetical protein 812758 5455275 Plav_0746 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412026.1 812087 R 402881 CDS YP_001412027.1 154251203 5455335 complement(812895..813491) 1 NC_009719.1 TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; KEGG: rpc:RPC_4332 DNA-3-methyladenine glycosylase I; DNA-3-methyladenine glycosylase I 813491 5455335 Plav_0747 Parvibaculum lavamentivorans DS-1 DNA-3-methyladenine glycosylase I YP_001412027.1 812895 R 402881 CDS YP_001412028.1 154251204 5455823 complement(813481..814431) 1 NC_009719.1 PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rpa:RPA1068 glycine cleavage T protein (aminomethyl transferase); glycine cleavage T protein (aminomethyl transferase) 814431 5455823 Plav_0748 Parvibaculum lavamentivorans DS-1 glycine cleavage T protein (aminomethyl transferase) YP_001412028.1 813481 R 402881 CDS YP_001412029.1 154251205 5454228 814534..815529 1 NC_009719.1 PFAM: glycosyl transferase family 9; KEGG: rru:Rru_A2230 glycosyl transferase, family 9; glycosyl transferase family protein 815529 5454228 Plav_0749 Parvibaculum lavamentivorans DS-1 glycosyl transferase family protein YP_001412029.1 814534 D 402881 CDS YP_001412030.1 154251206 5454489 815526..816863 1 NC_009719.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 816863 5454489 Plav_0750 Parvibaculum lavamentivorans DS-1 dihydroorotase YP_001412030.1 815526 D 402881 CDS YP_001412031.1 154251207 5455691 complement(816967..817239) 1 NC_009719.1 PFAM: Usg family protein; KEGG: acr:Acry_2505 Usg family protein; Usg family protein 817239 5455691 Plav_0751 Parvibaculum lavamentivorans DS-1 Usg family protein YP_001412031.1 816967 R 402881 CDS YP_001412032.1 154251208 5455452 817520..818512 1 NC_009719.1 TIGRFAM: Quinone oxidoreductase putative YhdH/YhfP; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bbt:BBta_2364 putative dehydrogenase, NAD(P)-binding domain and GroES-like domain; quinone oxidoreductase putative YhdH/YhfP 818512 5455452 Plav_0752 Parvibaculum lavamentivorans DS-1 quinone oxidoreductase putative YhdH/YhfP YP_001412032.1 817520 D 402881 CDS YP_001412033.1 154251209 5455173 818531..820387 1 NC_009719.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rpe:RPE_3824 AMP-dependent synthetase and ligase; acyl-CoA synthetase 820387 5455173 Plav_0753 Parvibaculum lavamentivorans DS-1 acyl-CoA synthetase YP_001412033.1 818531 D 402881 CDS YP_001412034.1 154251210 5454240 820403..821044 1 NC_009719.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rrs:RoseRS_1054 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 821044 5454240 Plav_0754 Parvibaculum lavamentivorans DS-1 lysine exporter protein LysE/YggA YP_001412034.1 820403 D 402881 CDS YP_001412035.1 154251211 5454889 821086..822630 1 NC_009719.1 thiamine-pyrophosphate requiring enzyme; hypothetical protein 822630 5454889 Plav_0755 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412035.1 821086 D 402881 CDS YP_001412036.1 154251212 5456162 complement(822723..823019) 1 NC_009719.1 KEGG: bbt:BBta_2379 hypothetical protein; hypothetical protein 823019 5456162 Plav_0756 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412036.1 822723 R 402881 CDS YP_001412037.1 154251213 5455137 complement(823211..823591) 1 NC_009719.1 KEGG: rpc:RPC_4328 hypothetical protein; hypothetical protein 823591 5455137 Plav_0757 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412037.1 823211 R 402881 CDS YP_001412038.1 154251214 5456269 complement(823718..824713) 1 NC_009719.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: hypothetical protein; 2-nitropropane dioxygenase 824713 5456269 Plav_0758 Parvibaculum lavamentivorans DS-1 2-nitropropane dioxygenase YP_001412038.1 823718 R 402881 CDS YP_001412039.1 154251215 5456262 824802..825578 1 NC_009719.1 KEGG: rru:Rru_A0255 hypothetical protein; hypothetical protein 825578 5456262 Plav_0759 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412039.1 824802 D 402881 CDS YP_001412040.1 154251216 5455126 825581..826744 1 NC_009719.1 PFAM: glucose sorbosone dehydrogenase; KEGG: pfo:Pfl_2615 hypothetical protein; glucose sorbosone dehydrogenase 826744 5455126 Plav_0760 Parvibaculum lavamentivorans DS-1 glucose sorbosone dehydrogenase YP_001412040.1 825581 D 402881 CDS YP_001412041.1 154251217 5455218 complement(826977..827438) 1 NC_009719.1 KEGG: rle:RL3079 putative transmembrane protein; putative transmembrane protein 827438 5455218 Plav_0761 Parvibaculum lavamentivorans DS-1 putative transmembrane protein YP_001412041.1 826977 R 402881 CDS YP_001412042.1 154251218 5455718 complement(827484..828686) 1 NC_009719.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: swi:Swit_4638 FMN-dependent alpha-hydroxy acid dehydrogenase; L-lactate dehydrogenase (cytochrome) 828686 5455718 Plav_0762 Parvibaculum lavamentivorans DS-1 L-lactate dehydrogenase (cytochrome) YP_001412042.1 827484 R 402881 CDS YP_001412043.1 154251219 5455815 complement(828766..829236) 1 NC_009719.1 PFAM: regulatory protein MarR; KEGG: mva:Mvan_6049 transcriptional regulator, MarR family; MarR family transcriptional regulator 829236 5455815 Plav_0763 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001412043.1 828766 R 402881 CDS YP_001412044.1 154251220 5456170 complement(829247..830029) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: 2-deoxy-D-gluconate 3-dehydrogenase; short-chain dehydrogenase/reductase SDR 830029 5456170 Plav_0764 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001412044.1 829247 R 402881 CDS YP_001412045.1 154251221 5455902 complement(830112..830477) 1 NC_009719.1 hypothetical protein 830477 5455902 Plav_0765 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412045.1 830112 R 402881 CDS YP_001412046.1 154251222 5455383 complement(830577..831059) 1 NC_009719.1 PFAM: ferric-uptake regulator; KEGG: maq:Maqu_3775 ferric uptake regulator, Fur family; ferric uptake regulator family protein 831059 5455383 Plav_0766 Parvibaculum lavamentivorans DS-1 ferric uptake regulator family protein YP_001412046.1 830577 R 402881 CDS YP_001412047.1 154251223 5456592 831144..831878 1 NC_009719.1 PFAM: protein of unknown function DUF159; KEGG: rpe:RPE_4383 protein of unknown function DUF159; hypothetical protein 831878 5456592 Plav_0767 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412047.1 831144 D 402881 CDS YP_001412048.1 154251224 5455602 complement(832040..832507) 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bra:BRADO2056 putative acetyltransferase; N-acetyltransferase GCN5 832507 5455602 Plav_0768 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001412048.1 832040 R 402881 CDS YP_001412049.1 154251225 5456532 832627..833970 1 NC_009719.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: ana:alr5216 probable hemolysin; hypothetical protein 833970 5456532 Plav_0769 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412049.1 832627 D 402881 CDS YP_001412050.1 154251226 5456922 complement(834170..835585) 1 NC_009719.1 PFAM: FAD linked oxidase domain protein; KEGG: rru:Rru_A0442 FAD linked oxidase-like; FAD linked oxidase domain-containing protein 835585 5456922 Plav_0770 Parvibaculum lavamentivorans DS-1 FAD linked oxidase domain-containing protein YP_001412050.1 834170 R 402881 CDS YP_001412051.1 154251227 5454327 complement(835661..835948) 1 NC_009719.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: mmr:Mmar10_2352 excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C 835948 5454327 Plav_0771 Parvibaculum lavamentivorans DS-1 excinuclease ABC subunit C YP_001412051.1 835661 R 402881 CDS YP_001412052.1 154251228 5456664 complement(836181..837476) 1 NC_009719.1 PFAM: beta-lactamase; KEGG: mtc:MT1771 penicillin-binding protein 4; beta-lactamase 837476 5456664 Plav_0772 Parvibaculum lavamentivorans DS-1 beta-lactamase YP_001412052.1 836181 R 402881 CDS YP_001412053.1 154251229 5455316 837954..838823 1 NC_009719.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mul:MUL_2390 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 838823 5455316 Plav_0773 Parvibaculum lavamentivorans DS-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001412053.1 837954 D 402881 CDS YP_001412054.1 154251230 5454747 complement(838820..839782) 1 NC_009719.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: mag:amb3712 putative translation factor; Sua5/YciO/YrdC/YwlC family protein 839782 5454747 Plav_0774 Parvibaculum lavamentivorans DS-1 Sua5/YciO/YrdC/YwlC family protein YP_001412054.1 838820 R 402881 CDS YP_001412055.1 154251231 5453762 839871..841631 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bms:BR0412 acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein 841631 5453762 Plav_0775 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001412055.1 839871 D 402881 CDS YP_001412056.1 154251232 5456531 841631..843019 1 NC_009719.1 PFAM: sodium/glutamate symporter; KEGG: hha:Hhal_2269 sodium/glutamate symporter; sodium/glutamate symporter 843019 5456531 Plav_0776 Parvibaculum lavamentivorans DS-1 sodium/glutamate symporter YP_001412056.1 841631 D 402881 CDS YP_001412057.1 154251233 5453581 843125..844183 1 NC_009719.1 PFAM: beta-lactamase domain protein; KEGG: metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 844183 5453581 Plav_0777 Parvibaculum lavamentivorans DS-1 beta-lactamase domain-containing protein YP_001412057.1 843125 D 402881 CDS YP_001412058.1 154251234 5454175 844229..845158 1 NC_009719.1 PFAM: histone deacetylase superfamily; KEGG: mca:MCA2486 histone deacetylase/AcuC/AphA family protein; histone deacetylase superfamily protein 845158 5454175 Plav_0778 Parvibaculum lavamentivorans DS-1 histone deacetylase superfamily protein YP_001412058.1 844229 D 402881 CDS YP_001412059.1 154251235 5455635 845196..845456 1 NC_009719.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: pde:Pden_0398 exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease VII small subunit 845456 5455635 Plav_0779 Parvibaculum lavamentivorans DS-1 exodeoxyribonuclease VII small subunit YP_001412059.1 845196 D 402881 CDS YP_001412060.1 154251236 5453492 845473..846381 1 NC_009719.1 PFAM: Polyprenyl synthetase; KEGG: mag:amb2903 geranylgeranyl pyrophosphate synthase; polyprenyl synthetase 846381 5453492 Plav_0780 Parvibaculum lavamentivorans DS-1 polyprenyl synthetase YP_001412060.1 845473 D 402881 CDS YP_001412061.1 154251237 5453610 846432..848384 1 NC_009719.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 848384 5453610 Plav_0781 Parvibaculum lavamentivorans DS-1 1-deoxy-D-xylulose-5-phosphate synthase YP_001412061.1 846432 D 402881 CDS YP_001412062.1 154251238 5455319 848389..849132 1 NC_009719.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: acr:Acry_2652 hemolysin A; hemolysin A 849132 5455319 Plav_0782 Parvibaculum lavamentivorans DS-1 hemolysin A YP_001412062.1 848389 D 402881 CDS YP_001412063.1 154251239 5453794 849122..850369 1 NC_009719.1 KEGG: sil:SPO0029 23S rRNA (uracil-5-)-methyltransferase RumA; 23S rRNA (uracil-5-)-methyltransferase RumA 850369 5453794 Plav_0783 Parvibaculum lavamentivorans DS-1 23S rRNA (uracil-5-)-methyltransferase RumA YP_001412063.1 849122 D 402881 CDS YP_001412064.1 154251240 5455577 complement(850380..850889) 1 NC_009719.1 hypothetical protein 850889 5455577 Plav_0784 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412064.1 850380 R 402881 CDS YP_001412065.1 154251241 5456810 complement(850882..851979) 1 NC_009719.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 851979 5456810 Plav_0785 Parvibaculum lavamentivorans DS-1 chorismate synthase YP_001412065.1 850882 R 402881 CDS YP_001412066.1 154251242 5455653 complement(852044..852883) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpe:RPE_4591 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 852883 5455653 Plav_0786 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001412066.1 852044 R 402881 CDS YP_001412067.1 154251243 5454420 complement(853013..853891) 1 NC_009719.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: bbt:BBta_7804 putative heat shock protein-DnaJ-like protein; chaperone DnaJ domain-containing protein 853891 5454420 Plav_0787 Parvibaculum lavamentivorans DS-1 chaperone DnaJ domain-containing protein YP_001412067.1 853013 R 402881 CDS YP_001412068.1 154251244 5453758 complement(853960..854664) 1 NC_009719.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: nmu:Nmul_A0104 Sel1-like repeat; Sel1 domain-containing protein 854664 5453758 Plav_0788 Parvibaculum lavamentivorans DS-1 Sel1 domain-containing protein YP_001412068.1 853960 R 402881 CDS YP_001412069.1 154251245 5455320 complement(854694..855182) 1 NC_009719.1 PFAM: 17 kDa surface antigen; KEGG: rbe:RBE_1424 17 kD surface antigen precursor; 17 kDa surface antigen 855182 5455320 Plav_0789 Parvibaculum lavamentivorans DS-1 17 kDa surface antigen YP_001412069.1 854694 R 402881 CDS YP_001412070.1 154251246 5453421 855332..855958 1 NC_009719.1 TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mmr:Mmar10_0857 pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase 855958 5453421 Plav_0790 Parvibaculum lavamentivorans DS-1 pyridoxamine 5'-phosphate oxidase YP_001412070.1 855332 D 402881 CDS YP_001412071.1 154251247 5453764 856014..856952 1 NC_009719.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: noc:Noc_2871 cation efflux protein; cation diffusion facilitator family transporter 856952 5453764 Plav_0791 Parvibaculum lavamentivorans DS-1 cation diffusion facilitator family transporter YP_001412071.1 856014 D 402881 CDS YP_001412072.1 154251248 5453761 856965..858551 1 NC_009719.1 KEGG: hypothetical protein; hypothetical protein 858551 5453761 Plav_0792 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412072.1 856965 D 402881 CDS YP_001412073.1 154251249 5455917 858635..858895 1 NC_009719.1 KEGG: bam:Bamb_2020 hypothetical protein; hypothetical protein 858895 5455917 Plav_0793 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412073.1 858635 D 402881 CDS YP_001412074.1 154251250 5455905 858908..859432 1 NC_009719.1 KEGG: rme:Rmet_1467 prophage CP4-57 regulatory; prophage CP4-57 regulatory 859432 5455905 Plav_0794 Parvibaculum lavamentivorans DS-1 prophage CP4-57 regulatory YP_001412074.1 858908 D 402881 CDS YP_001412075.1 154251251 5454059 859483..860238 1 NC_009719.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bja:bll2623 short-chain alcohol dehydrogenase; short-chain dehydrogenase/reductase SDR 860238 5454059 Plav_0795 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001412075.1 859483 D 402881 CDS YP_001412076.1 154251252 5454900 complement(860405..860827) 1 NC_009719.1 KEGG: sus:Acid_2771 hypothetical protein; hypothetical protein 860827 5454900 Plav_0796 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412076.1 860405 R 402881 CDS YP_001412077.1 154251253 5453447 complement(860827..862212) 1 NC_009719.1 PFAM: aminotransferase class-III; KEGG: ret:RHE_CH02145 probable adenosylmethionine--8-amino-7-oxononanoate aminotransferaseprotein; class III aminotransferase 862212 5453447 Plav_0797 Parvibaculum lavamentivorans DS-1 class III aminotransferase YP_001412077.1 860827 R 402881 CDS YP_001412078.1 154251254 5455759 complement(862495..863952) 1 NC_009719.1 PFAM: Amidase; KEGG: bja:bll3874 putative amidase; amidase 863952 5455759 Plav_0798 Parvibaculum lavamentivorans DS-1 amidase YP_001412078.1 862495 R 402881 CDS YP_001412079.1 154251255 5456313 864152..865792 1 NC_009719.1 activates fatty acids by binding to coenzyme A; putative acyl-CoA synthetase 865792 5456313 Plav_0799 Parvibaculum lavamentivorans DS-1 putative acyl-CoA synthetase YP_001412079.1 864152 D 402881 CDS YP_001412080.1 154251256 5455844 865865..866614 1 NC_009719.1 KEGG: eba:ebA2569 hypothetical protein; hypothetical protein 866614 5455844 Plav_0800 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412080.1 865865 D 402881 CDS YP_001412081.1 154251257 5456907 complement(866681..867586) 1 NC_009719.1 PFAM: beta-lactamase domain protein; KEGG: mmr:Mmar10_0859 beta-lactamase domain protein; beta-lactamase domain-containing protein 867586 5456907 Plav_0801 Parvibaculum lavamentivorans DS-1 beta-lactamase domain-containing protein YP_001412081.1 866681 R 402881 CDS YP_001412082.1 154251258 5455330 complement(867646..868128) 1 NC_009719.1 PFAM: regulatory protein MarR; KEGG: ret:RHE_CH03358 probable transcriptional regulator protein, MarR family; MarR family transcriptional regulator 868128 5455330 Plav_0802 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001412082.1 867646 R 402881 CDS YP_001412083.1 154251259 5456894 complement(868310..868627) 1 NC_009719.1 hypothetical protein 868627 5456894 Plav_0803 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412083.1 868310 R 402881 CDS YP_001412084.1 154251260 5455450 complement(868765..870315) 1 NC_009719.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 870315 5455450 Plav_0804 Parvibaculum lavamentivorans DS-1 long-chain-fatty-acid--CoA ligase YP_001412084.1 868765 R 402881 CDS YP_001412085.1 154251261 5455923 870570..870767 1 NC_009719.1 hypothetical protein 870767 5455923 Plav_0805 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412085.1 870570 D 402881 CDS YP_001412086.1 154251262 5456759 complement(870858..872093) 1 NC_009719.1 PFAM: aminotransferase class V; Pyridoxal-dependent decarboxylase; KEGG: eli:ELI_00260 putative sphingosine-1-phosphate lyase; pyridoxal-dependent decarboxylase 872093 5456759 Plav_0806 Parvibaculum lavamentivorans DS-1 pyridoxal-dependent decarboxylase YP_001412086.1 870858 R 402881 CDS YP_001412087.1 154251263 5454813 complement(872148..872684) 1 NC_009719.1 PFAM: nuclear export factor GLE1; KEGG: atc:AGR_C_2707 hypothetical protein; nuclear export factor GLE1 872684 5454813 Plav_0807 Parvibaculum lavamentivorans DS-1 nuclear export factor GLE1 YP_001412087.1 872148 R 402881 CDS YP_001412088.1 154251264 5456336 complement(872696..874840) 1 NC_009719.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rme:Rmet_4565 TonB-dependent receptor; TonB-dependent receptor 874840 5456336 Plav_0808 Parvibaculum lavamentivorans DS-1 TonB-dependent receptor YP_001412088.1 872696 R 402881 CDS YP_001412089.1 154251265 5456311 complement(874924..875319) 1 NC_009719.1 hypothetical protein 875319 5456311 Plav_0809 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412089.1 874924 R 402881 CDS YP_001412090.1 154251266 5454122 complement(875390..876199) 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: fal:FRAAL2628 putative enoyl-CoA hydratase/isomerase, involved in phenylacetic acid degradation; enoyl-CoA hydratase/isomerase 876199 5454122 Plav_0810 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001412090.1 875390 R 402881 CDS YP_001412091.1 154251267 5456057 876313..877158 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpa:RPA0416 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 877158 5456057 Plav_0811 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001412091.1 876313 D 402881 CDS YP_001412092.1 154251268 5456147 complement(877221..879200) 1 NC_009719.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pca:Pcar_0454 TonB-dependent receptor, putative; TonB-dependent receptor plug 879200 5456147 Plav_0812 Parvibaculum lavamentivorans DS-1 TonB-dependent receptor plug YP_001412092.1 877221 R 402881 CDS YP_001412093.1 154251269 5455732 880072..881703 1 NC_009719.1 PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpd:RPD_1860 FAD dependent oxidoreductase; cyclohexanone monooxygenase 881703 5455732 Plav_0813 Parvibaculum lavamentivorans DS-1 cyclohexanone monooxygenase YP_001412093.1 880072 D 402881 CDS YP_001412094.1 154251270 5455666 complement(881706..882821) 1 NC_009719.1 PFAM: peptidase M20; peptidase M42 family protein; KEGG: mgm:Mmc1_0220 peptidase M42 family protein; peptidase M42 family protein 882821 5455666 Plav_0814 Parvibaculum lavamentivorans DS-1 peptidase M42 family protein YP_001412094.1 881706 R 402881 CDS YP_001412095.1 154251271 5455765 complement(882845..884563) 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; RimK domain protein ATP-grasp; KEGG: mes:Meso_2468 GCN5-related N-acetyltransferase; glutathione synthase 884563 5455765 Plav_0815 Parvibaculum lavamentivorans DS-1 glutathione synthase YP_001412095.1 882845 R 402881 CDS YP_001412096.1 154251272 5456716 complement(884598..886370) 1 NC_009719.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: mes:Meso_2469 asparagine synthase (glutamine-hydrolyzing); asparagine synthase 886370 5456716 Plav_0816 Parvibaculum lavamentivorans DS-1 asparagine synthase YP_001412096.1 884598 R 402881 CDS YP_001412097.1 154251273 5457021 complement(886521..888410) 1 NC_009719.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE0835 ABC-type multidrug/protein/lipid transport system, ATPase component; ABC transporter-like protein 888410 5457021 Plav_0817 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001412097.1 886521 R 402881 CDS YP_001412098.1 154251274 5455498 complement(888407..890116) 1 NC_009719.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_3848 ABC transporter related; ABC transporter-like protein 890116 5455498 Plav_0818 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001412098.1 888407 R 402881 CDS YP_001412099.1 154251275 5455386 890484..891764 1 NC_009719.1 KEGG: mes:Meso_2021 hypothetical protein; hypothetical protein 891764 5455386 Plav_0819 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412099.1 890484 D 402881 CDS YP_001412100.1 154251276 5455380 891769..892449 1 NC_009719.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mlo:mlr1575 hypothetical protein; type 11 methyltransferase 892449 5455380 Plav_0820 Parvibaculum lavamentivorans DS-1 type 11 methyltransferase YP_001412100.1 891769 D 402881 CDS YP_001412101.1 154251277 5455367 complement(892434..893663) 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: abo:ABO_0984 glutaryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 893663 5455367 Plav_0821 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001412101.1 892434 R 402881 CDS YP_001412102.1 154251278 5455214 complement(893738..894667) 1 NC_009719.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pde:Pden_4581 transcriptional regulator, LysR family; LysR family transcriptional regulator 894667 5455214 Plav_0822 Parvibaculum lavamentivorans DS-1 LysR family transcriptional regulator YP_001412102.1 893738 R 402881 CDS YP_001412103.1 154251279 5454133 894766..895788 1 NC_009719.1 PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: rso:RSc3335 hypothetical protein; NAD-dependent epimerase/dehydratase 895788 5454133 Plav_0823 Parvibaculum lavamentivorans DS-1 NAD-dependent epimerase/dehydratase YP_001412103.1 894766 D 402881 CDS YP_001412104.1 154251280 5454831 complement(895954..896961) 1 NC_009719.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: rso:RS05452 putative transmembrane protein; 2-nitropropane dioxygenase 896961 5454831 Plav_0824 Parvibaculum lavamentivorans DS-1 2-nitropropane dioxygenase YP_001412104.1 895954 R 402881 CDS YP_001412105.1 154251281 5456500 complement(897055..897966) 1 NC_009719.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A1900 transcriptional regulator, LysR-family; LysR family transcriptional regulator 897966 5456500 Plav_0825 Parvibaculum lavamentivorans DS-1 LysR family transcriptional regulator YP_001412105.1 897055 R 402881 CDS YP_001412106.1 154251282 5455869 898189..899187 1 NC_009719.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: rpd:RPD_2021 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 899187 5455869 Plav_0826 Parvibaculum lavamentivorans DS-1 2-nitropropane dioxygenase YP_001412106.1 898189 D 402881 CDS YP_001412107.1 154251283 5455543 complement(899237..899941) 1 NC_009719.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: pmy:Pmen_4353 putative transcriptional regulator, Crp/Fnr family; CRP/FNR family transcriptional regulator 899941 5455543 Plav_0827 Parvibaculum lavamentivorans DS-1 CRP/FNR family transcriptional regulator YP_001412107.1 899237 R 402881 CDS YP_001412108.1 154251284 5455401 900042..900872 1 NC_009719.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: hne:HNE_0905 dioxygenase, TauD/TfdA family; taurine dioxygenase 900872 5455401 Plav_0828 Parvibaculum lavamentivorans DS-1 taurine dioxygenase YP_001412108.1 900042 D 402881 CDS YP_001412109.1 154251285 5455586 900941..901810 1 NC_009719.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: reh:H16_A0038 alpha-ketoglutarate-dependent taurine dioxygenase; taurine dioxygenase 901810 5455586 Plav_0829 Parvibaculum lavamentivorans DS-1 taurine dioxygenase YP_001412109.1 900941 D 402881 CDS YP_001412110.1 154251286 5454112 complement(902229..903134) 1 NC_009719.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: atc:AGR_C_664 hypothetical protein; hypothetical protein 903134 5454112 Plav_0830 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412110.1 902229 R 402881 CDS YP_001412111.1 154251287 5455808 complement(903156..904493) 1 NC_009719.1 PFAM: beta-lactamase; KEGG: sen:SACE_2212 beta-lactamase; beta-lactamase 904493 5455808 Plav_0831 Parvibaculum lavamentivorans DS-1 beta-lactamase YP_001412111.1 903156 R 402881 CDS YP_001412112.1 154251288 5455674 complement(904810..905946) 1 NC_009719.1 PFAM: beta-lactamase; KEGG: hne:HNE_1398 beta-lactamase; beta-lactamase 905946 5455674 Plav_0832 Parvibaculum lavamentivorans DS-1 beta-lactamase YP_001412112.1 904810 R 402881 CDS YP_001412113.1 154251289 5455982 905988..907958 1 NC_009719.1 KEGG: lic:LIC20191 hypothetical protein; hypothetical protein 907958 5455982 Plav_0833 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412113.1 905988 D 402881 CDS YP_001412114.1 154251290 5453871 complement(907945..908739) 1 NC_009719.1 activator of 3-phenylpropionic acid catabolism; DNA-binding transcriptional activator MhpR 908739 5453871 Plav_0834 Parvibaculum lavamentivorans DS-1 DNA-binding transcriptional activator MhpR YP_001412114.1 907945 R 402881 CDS YP_001412115.1 154251291 5453872 complement(908805..909530) 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_1923 ABC transporter related; ABC transporter-like protein 909530 5453872 Plav_0835 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001412115.1 908805 R 402881 CDS YP_001412116.1 154251292 5454778 complement(909523..910191) 1 NC_009719.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_1392 molybdate ABC transporter, permease protein; molybdate ABC transporter inner membrane subunit 910191 5454778 Plav_0836 Parvibaculum lavamentivorans DS-1 molybdate ABC transporter inner membrane subunit YP_001412116.1 909523 R 402881 CDS YP_001412117.1 154251293 5454022 complement(910219..911013) 1 NC_009719.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: aeh:Mlg_1925 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 911013 5454022 Plav_0837 Parvibaculum lavamentivorans DS-1 molybdenum ABC transporter periplasmic molybdate-binding protein YP_001412117.1 910219 R 402881 CDS YP_001412118.1 154251294 5455095 911200..912057 1 NC_009719.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: eli:ELI_04765 taurine dioxygenase; taurine dioxygenase 912057 5455095 Plav_0838 Parvibaculum lavamentivorans DS-1 taurine dioxygenase YP_001412118.1 911200 D 402881 CDS YP_001412119.1 154251295 5453427 912084..912653 1 NC_009719.1 PFAM: protein of unknown function DUF1214; KEGG: afu:AF2163 hypothetical protein; hypothetical protein 912653 5453427 Plav_0839 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412119.1 912084 D 402881 CDS YP_001412120.1 154251296 5456105 912650..913195 1 NC_009719.1 KEGG: nar:Saro_2217 integral membrane protein-like; integral membrane protein 913195 5456105 Plav_0840 Parvibaculum lavamentivorans DS-1 integral membrane protein YP_001412120.1 912650 D 402881 CDS YP_001412121.1 154251297 5456001 913218..913793 1 NC_009719.1 PFAM: protein of unknown function DUF1214; KEGG: afu:AF2163 hypothetical protein; hypothetical protein 913793 5456001 Plav_0841 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412121.1 913218 D 402881 CDS YP_001412122.1 154251298 5453883 913790..914335 1 NC_009719.1 PFAM: protein of unknown function DUF1254; KEGG: nar:Saro_2217 integral membrane protein-like; hypothetical protein 914335 5453883 Plav_0842 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412122.1 913790 D 402881 CDS YP_001412123.1 154251299 5456698 complement(914325..915872) 1 NC_009719.1 KEGG: hne:HNE_2421 hypothetical protein; hypothetical protein 915872 5456698 Plav_0843 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412123.1 914325 R 402881 CDS YP_001412124.1 154251300 5456343 complement(915941..918040) 1 NC_009719.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: sme:SMc00114 probable protease II oligopeptidase B hydrolase serine protease protein; oligopeptidase B 918040 5456343 Plav_0844 Parvibaculum lavamentivorans DS-1 oligopeptidase B YP_001412124.1 915941 R 402881 CDS YP_001412125.1 154251301 5454951 complement(918231..918650) 1 NC_009719.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: sme:SMc00117 peptide methionine sulfoxide reductase; methionine-R-sulfoxide reductase 918650 5454951 Plav_0845 Parvibaculum lavamentivorans DS-1 methionine-R-sulfoxide reductase YP_001412125.1 918231 R 402881 CDS YP_001412126.1 154251302 5454037 complement(918799..919251) 1 NC_009719.1 PFAM: MaoC domain protein dehydratase; KEGG: MaoC family protein; dehydratase 919251 5454037 Plav_0846 Parvibaculum lavamentivorans DS-1 dehydratase YP_001412126.1 918799 R 402881 CDS YP_001412127.1 154251303 5456459 complement(919350..919823) 1 NC_009719.1 PFAM: OmpA/MotB domain protein; KEGG: pau:PA14_53500 hypothetical protein; OmpA/MotB domain-containing protein 919823 5456459 Plav_0847 Parvibaculum lavamentivorans DS-1 OmpA/MotB domain-containing protein YP_001412127.1 919350 R 402881 CDS YP_001412128.1 154251304 5454428 complement(920150..921703) 1 NC_009719.1 PFAM: AMP-dependent synthetase and ligase; KEGG: hne:HNE_2308 AMP-binding protein; AMP-dependent synthetase and ligase 921703 5454428 Plav_0848 Parvibaculum lavamentivorans DS-1 AMP-dependent synthetase and ligase YP_001412128.1 920150 R 402881 CDS YP_001412129.1 154251305 5455684 921923..922828 1 NC_009719.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 922828 5455684 Plav_0849 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase YP_001412129.1 921923 D 402881 CDS YP_001412130.1 154251306 5456617 complement(923028..924881) 1 NC_009719.1 PFAM: sodium/hydrogen exchanger; KEGG: abo:ABO_1404 NhaP-type Na+/H+ and K+/H+ antiporters; sodium/hydrogen exchanger 924881 5456617 Plav_0850 Parvibaculum lavamentivorans DS-1 sodium/hydrogen exchanger YP_001412130.1 923028 R 402881 CDS YP_001412131.1 154251307 5456031 complement(924966..926273) 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: mmr:Mmar10_0880 major facilitator superfamily MFS_1; major facilitator superfamily transporter 926273 5456031 Plav_0851 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001412131.1 924966 R 402881 CDS YP_001412132.1 154251308 5455998 complement(926270..927067) 1 NC_009719.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: ani:AN6818.2 hypothetical protein; phytanoyl-CoA dioxygenase 927067 5455998 Plav_0852 Parvibaculum lavamentivorans DS-1 phytanoyl-CoA dioxygenase YP_001412132.1 926270 R 402881 CDS YP_001412133.1 154251309 5456782 927200..928783 1 NC_009719.1 KEGG: bja:bll5942 flavin-binding family monooxygenase; flavin-binding family monooxygenase 928783 5456782 Plav_0853 Parvibaculum lavamentivorans DS-1 flavin-binding family monooxygenase YP_001412133.1 927200 D 402881 CDS YP_001412134.1 154251310 5455618 complement(928808..930058) 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: mmr:Mmar10_0880 major facilitator superfamily MFS_1; major facilitator superfamily transporter 930058 5455618 Plav_0854 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001412134.1 928808 R 402881 CDS YP_001412135.1 154251311 5455304 complement(930156..930830) 1 NC_009719.1 PFAM: Male sterility domain; KEGG: rpa:RPA2985 conserved unknownl protein; hypothetical protein 930830 5455304 Plav_0855 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412135.1 930156 R 402881 CDS YP_001412136.1 154251312 5455857 complement(930877..932097) 1 NC_009719.1 PFAM: regulatory protein MerR; Citrate synthase; KEGG: rxy:Rxyl_2556 citrate synthase; citrate synthase 932097 5455857 Plav_0856 Parvibaculum lavamentivorans DS-1 citrate synthase YP_001412136.1 930877 R 402881 CDS YP_001412137.1 154251313 5455737 932269..933441 1 NC_009719.1 PFAM: Citrate synthase; KEGG: atu:Atu5306 citrate synthase; citrate (Si)-synthase 933441 5455737 Plav_0857 Parvibaculum lavamentivorans DS-1 citrate (Si)-synthase YP_001412137.1 932269 D 402881 CDS YP_001412138.1 154251314 5454548 933555..934676 1 NC_009719.1 KEGG: sme:SMc03928 hypothetical protein; hypothetical protein 934676 5454548 Plav_0858 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412138.1 933555 D 402881 CDS YP_001412139.1 154251315 5454503 complement(934653..935459) 1 NC_009719.1 hypothetical protein 935459 5454503 Plav_0859 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412139.1 934653 R 402881 CDS YP_001412140.1 154251316 5453438 complement(935444..936064) 1 NC_009719.1 hypothetical protein 936064 5453438 Plav_0860 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412140.1 935444 R 402881 CDS YP_001412141.1 154251317 5454391 complement(936061..936828) 1 NC_009719.1 PFAM: ABC-2 type transporter; KEGG: sde:Sde_2924 putative ABC transporter inner membrane subunit; ABC transporter 936828 5454391 Plav_0861 Parvibaculum lavamentivorans DS-1 ABC transporter YP_001412141.1 936061 R 402881 CDS YP_001412142.1 154251318 5454162 complement(936825..937751) 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psa:PST_3929 ABC transporter, ATP-binding protein; ABC transporter-like protein 937751 5454162 Plav_0862 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001412142.1 936825 R 402881 CDS YP_001412143.1 154251319 5454330 complement(937843..938262) 1 NC_009719.1 hypothetical protein 938262 5454330 Plav_0863 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412143.1 937843 R 402881 CDS YP_001412144.1 154251320 5454312 938345..939487 1 NC_009719.1 PFAM: Saccharopine dehydrogenase; KEGG: hal:VNG2166Cm hypothetical protein; saccharopine dehydrogenase 939487 5454312 Plav_0864 Parvibaculum lavamentivorans DS-1 saccharopine dehydrogenase YP_001412144.1 938345 D 402881 CDS YP_001412145.1 154251321 5454426 complement(939484..939747) 1 NC_009719.1 hypothetical protein 939747 5454426 Plav_0865 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412145.1 939484 R 402881 CDS YP_001412146.1 154251322 5454748 complement(939778..940083) 1 NC_009719.1 hypothetical protein 940083 5454748 Plav_0866 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412146.1 939778 R 402881 CDS YP_001412147.1 154251323 5455530 940245..941342 1 NC_009719.1 KEGG: hne:HNE_0728 hypothetical protein; hypothetical protein 941342 5455530 Plav_0867 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412147.1 940245 D 402881 CDS YP_001412148.1 154251324 5456771 complement(941345..942136) 1 NC_009719.1 PFAM: helix-turn-helix domain protein; KEGG: sme:SMc00089 hypothetical protein; XRE family transcriptional regulator 942136 5456771 Plav_0868 Parvibaculum lavamentivorans DS-1 XRE family transcriptional regulator YP_001412148.1 941345 R 402881 CDS YP_001412149.1 154251325 5455855 complement(942133..942402) 1 NC_009719.1 hypothetical protein 942402 5455855 Plav_0869 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412149.1 942133 R 402881 CDS YP_001412150.1 154251326 5456882 942543..943475 1 NC_009719.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ppd:Ppro_3541 alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase domain-containing protein 943475 5456882 Plav_0870 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase domain-containing protein YP_001412150.1 942543 D 402881 CDS YP_001412151.1 154251327 5454005 943766..944182 1 NC_009719.1 PFAM: ROSMUCR transcriptional regulator; KEGG: transcriptional regulator; MucR family transcriptional regulator 944182 5454005 Plav_0871 Parvibaculum lavamentivorans DS-1 MucR family transcriptional regulator YP_001412151.1 943766 D 402881 CDS YP_001412152.1 154251328 5453974 944320..944829 1 NC_009719.1 PFAM: protein of unknown function DUF1457; KEGG: hne:HNE_0740 hypothetical protein; hypothetical protein 944829 5453974 Plav_0872 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412152.1 944320 D 402881 CDS YP_001412153.1 154251329 5456082 944921..945388 1 NC_009719.1 hypothetical protein 945388 5456082 Plav_0873 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412153.1 944921 D 402881 CDS YP_001412154.1 154251330 5455461 complement(945363..945953) 1 NC_009719.1 PFAM: helix-turn-helix domain protein; KEGG: nar:Saro_2070 transcriptional regulator, XRE family; XRE family transcriptional regulator 945953 5455461 Plav_0874 Parvibaculum lavamentivorans DS-1 XRE family transcriptional regulator YP_001412154.1 945363 R 402881 CDS YP_001412155.1 154251331 5454719 946037..946447 1 NC_009719.1 PFAM: Chromosomal replication initiator DnaA domain; KEGG: mmr:Mmar10_0894 DnaA related protein; chromosomal replication initiator DnaA domain-containing protein 946447 5454719 Plav_0875 Parvibaculum lavamentivorans DS-1 chromosomal replication initiator DnaA domain-containing protein YP_001412155.1 946037 D 402881 CDS YP_001412156.1 154251332 5455165 946444..947250 1 NC_009719.1 KEGG: rpe:RPE_1869 hypothetical protein; hypothetical protein 947250 5455165 Plav_0876 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412156.1 946444 D 402881 CDS YP_001412157.1 154251333 5453358 complement(947214..947639) 1 NC_009719.1 PFAM: Fe-S metabolism associated SufE; KEGG: nha:Nham_2625 Fe-S metabolism associated SufE; Fe-S metabolism associated SufE 947639 5453358 Plav_0877 Parvibaculum lavamentivorans DS-1 Fe-S metabolism associated SufE YP_001412157.1 947214 R 402881 CDS YP_001412158.1 154251334 5455590 complement(947765..948175) 1 NC_009719.1 hypothetical protein 948175 5455590 Plav_0878 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412158.1 947765 R 402881 CDS YP_001412159.1 154251335 5456073 complement(948506..949600) 1 NC_009719.1 KEGG: mmr:Mmar10_0898 hypothetical protein; hypothetical protein 949600 5456073 Plav_0879 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412159.1 948506 R 402881 CDS YP_001412160.1 154251336 5456299 949796..950131 1 NC_009719.1 PFAM: protein of unknown function DUF1491; KEGG: hypothetical protein; hypothetical protein 950131 5456299 Plav_0880 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412160.1 949796 D 402881 CDS YP_001412161.1 154251337 5453695 complement(950156..950374) 1 NC_009719.1 KEGG: bja:bsl7372 hypothetical protein; hypothetical protein 950374 5453695 Plav_0881 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412161.1 950156 R 402881 CDS YP_001412162.1 154251338 5456778 950485..952161 1 NC_009719.1 TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: swi:Swit_5127 peptide chain release factor 3; peptide chain release factor 3 952161 5456778 Plav_0882 Parvibaculum lavamentivorans DS-1 peptide chain release factor 3 YP_001412162.1 950485 D 402881 CDS YP_001412163.1 154251339 5454731 952202..953344 1 NC_009719.1 PFAM: MscS Mechanosensitive ion channel; KEGG: mmr:Mmar10_0910 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 953344 5454731 Plav_0883 Parvibaculum lavamentivorans DS-1 mechanosensitive ion channel protein MscS YP_001412163.1 952202 D 402881 CDS YP_001412164.1 154251340 5455273 complement(953346..954554) 1 NC_009719.1 KEGG: mba:Mbar_A0316 hypothetical protein; hypothetical protein 954554 5455273 Plav_0884 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412164.1 953346 R 402881 CDS YP_001412165.1 154251341 5453851 complement(954551..955213) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: transcriptional regulator, TetR family; TetR family transcriptional regulator 955213 5453851 Plav_0885 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001412165.1 954551 R 402881 CDS YP_001412166.1 154251342 5453598 955326..956645 1 NC_009719.1 PFAM: FAD dependent oxidoreductase; KEGG: mag:amb2799 glycine/D-amino acid oxidase; FAD dependent oxidoreductase 956645 5453598 Plav_0886 Parvibaculum lavamentivorans DS-1 FAD dependent oxidoreductase YP_001412166.1 955326 D 402881 CDS YP_001412167.1 154251343 5454101 956790..957182 1 NC_009719.1 hypothetical protein 957182 5454101 Plav_0887 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412167.1 956790 D 402881 CDS YP_001412168.1 154251344 5456024 complement(957294..957812) 1 NC_009719.1 PFAM: conserved hypothetical protein; KEGG: hypothetical protein; hypothetical protein 957812 5456024 Plav_0888 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412168.1 957294 R 402881 CDS YP_001412169.1 154251345 5453887 complement(957799..959457) 1 NC_009719.1 PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: bms:BR0181 sulfite reductase (NADPH) hemoprotein beta-component; sulfite reductase 959457 5453887 Plav_0889 Parvibaculum lavamentivorans DS-1 sulfite reductase YP_001412169.1 957799 R 402881 CDS YP_001412170.1 154251346 5455526 complement(959492..959827) 1 NC_009719.1 KEGG: mlo:msl3231 hypothetical protein; hypothetical protein 959827 5455526 Plav_0890 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412170.1 959492 R 402881 CDS YP_001412171.1 154251347 5453895 complement(960035..960841) 1 NC_009719.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_C0801 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 960841 5453895 Plav_0891 Parvibaculum lavamentivorans DS-1 binding-protein-dependent transport system inner membrane protein YP_001412171.1 960035 R 402881 CDS YP_001412172.1 154251348 5455805 complement(960838..961596) 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mll1293 ATP-binding protein of ABC transporter; ABC transporter-like protein 961596 5455805 Plav_0892 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001412172.1 960838 R 402881 CDS YP_001412173.1 154251349 5456774 complement(961593..962633) 1 NC_009719.1 PFAM: NMT1/THI5 like domain protein; KEGG: hypothetical protein; K02051 sulfonate/nitrate/taurine transport system substrate-binding protein; NMT1/THI5-like domain-containing protein 962633 5456774 Plav_0893 Parvibaculum lavamentivorans DS-1 NMT1/THI5-like domain-containing protein YP_001412173.1 961593 R 402881 CDS YP_001412174.1 154251350 5456628 complement(962722..963243) 1 NC_009719.1 KEGG: nar:Saro_2217 integral membrane protein-like; integral membrane protein 963243 5456628 Plav_0894 Parvibaculum lavamentivorans DS-1 integral membrane protein YP_001412174.1 962722 R 402881 CDS YP_001412175.1 154251351 5456221 complement(963240..963824) 1 NC_009719.1 PFAM: protein of unknown function DUF1214; KEGG: nar:Saro_2218 protein of unknown function DUF1214; hypothetical protein 963824 5456221 Plav_0895 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412175.1 963240 R 402881 CDS YP_001412176.1 154251352 5454749 complement(963987..965786) 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rru:Rru_A1013 ABC transporter component; ABC transporter-like protein 965786 5454749 Plav_0896 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001412176.1 963987 R 402881 CDS YP_001412177.1 154251353 5454697 complement(965851..967926) 1 NC_009719.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: mes:Meso_0883 penicillin-binding protein, 1A family; 1A family penicillin-binding protein 967926 5454697 Plav_0897 Parvibaculum lavamentivorans DS-1 1A family penicillin-binding protein YP_001412177.1 965851 R 402881 CDS YP_001412178.1 154251354 5453505 968132..968593 1 NC_009719.1 PFAM: protein of unknown function UPF0153; KEGG: rpb:RPB_3505 uncharacterised conserved protein UCP006173; hypothetical protein 968593 5453505 Plav_0898 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412178.1 968132 D 402881 CDS YP_001412179.1 154251355 5455554 968624..969055 1 NC_009719.1 KEGG: rle:RL1484 putative transmembrane protein; putative transmembrane protein 969055 5455554 Plav_0899 Parvibaculum lavamentivorans DS-1 putative transmembrane protein YP_001412179.1 968624 D 402881 CDS YP_001412180.1 154251356 5455534 969166..970674 1 NC_009719.1 PFAM: phosphate transporter; KEGG: hne:HNE_3040 phosphate transporter family protein; phosphate transporter 970674 5455534 Plav_0900 Parvibaculum lavamentivorans DS-1 phosphate transporter YP_001412180.1 969166 D 402881 CDS YP_001412181.1 154251357 5454353 complement(970892..971353) 1 NC_009719.1 PFAM: NUDIX hydrolase; KEGG: bra:BRADO4863 conserved hypothetical protein; putative hydrolase; NUDIX hydrolase 971353 5454353 Plav_0901 Parvibaculum lavamentivorans DS-1 NUDIX hydrolase YP_001412181.1 970892 R 402881 CDS YP_001412182.1 154251358 5454901 972153..973499 1 NC_009719.1 PFAM: protein of unknown function DUF264; KEGG: bme:BMEI1350 phage DNA packaging protein; hypothetical protein 973499 5454901 Plav_0902 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412182.1 972153 D 402881 CDS YP_001412183.1 154251359 5454730 974469..975644 1 NC_009719.1 TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: rpe:RPE_1895 phage portal protein, HK97 family; HK97 family phage portal protein 975644 5454730 Plav_0903 Parvibaculum lavamentivorans DS-1 HK97 family phage portal protein YP_001412183.1 974469 D 402881 CDS YP_001412184.1 154251360 5454356 975616..976221 1 NC_009719.1 KEGG: hypothetical protein; hypothetical protein 976221 5454356 Plav_0904 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412184.1 975616 D 402881 CDS YP_001412185.1 154251361 5453808 976418..977077 1 NC_009719.1 TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: bov:BOV_0589 caudovirus prohead protease; HK97 family phage prohead protease 977077 5453808 Plav_0905 Parvibaculum lavamentivorans DS-1 HK97 family phage prohead protease YP_001412185.1 976418 D 402881 CDS YP_001412186.1 154251362 5454190 977106..978413 1 NC_009719.1 TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: bms:BR0589 major capsid protein, HK97 family; HK97 family phage major capsid protein 978413 5454190 Plav_0906 Parvibaculum lavamentivorans DS-1 HK97 family phage major capsid protein YP_001412186.1 977106 D 402881 CDS YP_001412187.1 154251363 5453777 978419..978847 1 NC_009719.1 KEGG: mlo:mlr8526 hypothetical protein; hypothetical protein 978847 5453777 Plav_0907 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412187.1 978419 D 402881 CDS YP_001412188.1 154251364 5456037 978906..979469 1 NC_009719.1 KEGG: rpc:RPC_1813 phage conserved hypothetical protein, phiE125 gp8; hypothetical protein 979469 5456037 Plav_0908 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412188.1 978906 D 402881 CDS YP_001412189.1 154251365 5456179 979466..979783 1 NC_009719.1 TIGRFAM: phage head-tail adaptor, putative; PFAM: putative head-tail adaptor protein; KEGG: dvu:DVU1497 head-tail adaptor, putative; phage head-tail adaptor 979783 5456179 Plav_0909 Parvibaculum lavamentivorans DS-1 phage head-tail adaptor YP_001412189.1 979466 D 402881 CDS YP_001412190.1 154251366 5456123 979780..980181 1 NC_009719.1 KEGG: rpe:RPE_1916 gene transfer agent (GTA) orfg8; hypothetical protein 980181 5456123 Plav_0910 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412190.1 979780 D 402881 CDS YP_001412191.1 154251367 5455129 980394..980807 1 NC_009719.1 TIGRFAM: phage major tail protein, TP901-1 family; KEGG: rpe:RPE_1917 phage major tail protein, TP901-1 family; TP901-1 family phage major tail protein 980807 5455129 Plav_0911 Parvibaculum lavamentivorans DS-1 TP901-1 family phage major tail protein YP_001412191.1 980394 D 402881 CDS YP_001412192.1 154251368 5455886 complement(980815..981729) 1 NC_009719.1 hypothetical protein 981729 5455886 Plav_0912 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412192.1 980815 R 402881 CDS YP_001412193.1 154251369 5455196 981844..982161 1 NC_009719.1 KEGG: atc:AGR_C_1758 hypothetical protein; hypothetical protein 982161 5455196 Plav_0913 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412193.1 981844 D 402881 CDS YP_001412194.1 154251370 5455835 982158..982352 1 NC_009719.1 KEGG: nwi:Nwi_1176 phage conserved hypothetical protein; hypothetical protein 982352 5455835 Plav_0914 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412194.1 982158 D 402881 CDS YP_001412195.1 154251371 5456294 982360..982977 1 NC_009719.1 KEGG: pde:Pden_2891 phage-related minor tail protein-like; phage-like minor tail protein-like protein 982977 5456294 Plav_0915 Parvibaculum lavamentivorans DS-1 phage-like minor tail protein-like protein YP_001412195.1 982360 D 402881 CDS YP_001412196.1 154251372 5455521 982979..983611 1 NC_009719.1 KEGG: pde:Pden_2890 hypothetical protein; hypothetical protein 983611 5455521 Plav_0916 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412196.1 982979 D 402881 CDS YP_001412197.1 154251373 5455097 983616..984482 1 NC_009719.1 KEGG: nwi:Nwi_0795 hypothetical protein; hypothetical protein 984482 5455097 Plav_0917 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412197.1 983616 D 402881 CDS YP_001412198.1 154251374 5455991 984484..984927 1 NC_009719.1 TIGRFAM: putative phage cell wall peptidase, NlpC/P60 family; PFAM: NLP/P60 protein; KEGG: nha:Nham_1425 putative phage cell wall peptidase, NlpC/P60; NlpC/P60 family phage cell wall peptidase 984927 5455991 Plav_0918 Parvibaculum lavamentivorans DS-1 NlpC/P60 family phage cell wall peptidase YP_001412198.1 984484 D 402881 CDS YP_001412199.1 154251375 5454627 984931..988791 1 NC_009719.1 KEGG: nwi:Nwi_0792 gene transfer agent (GTA) like protein; gene transfer agent (GTA)-like protein 988791 5454627 Plav_0919 Parvibaculum lavamentivorans DS-1 gene transfer agent (GTA)-like protein YP_001412199.1 984931 D 402881 CDS YP_001412200.1 154251376 5454285 988784..989500 1 NC_009719.1 KEGG: nwi:Nwi_0791 hypothetical protein; hypothetical protein 989500 5454285 Plav_0920 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412200.1 988784 D 402881 CDS YP_001412201.1 154251377 5456899 989608..989970 1 NC_009719.1 hypothetical protein 989970 5456899 Plav_0921 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412201.1 989608 D 402881 CDS YP_001412202.1 154251378 5456909 990389..990598 1 NC_009719.1 hypothetical protein 990598 5456909 Plav_0922 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412202.1 990389 D 402881 CDS YP_001412203.1 154251379 5453469 990722..991513 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mgi:Mflv_0296 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 991513 5453469 Plav_0923 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001412203.1 990722 D 402881 CDS YP_001412204.1 154251380 5454452 991541..992692 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rme:Rmet_5357 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 992692 5454452 Plav_0924 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001412204.1 991541 D 402881 CDS YP_001412205.1 154251381 5455118 992703..993722 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rme:Rmet_5358 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 993722 5455118 Plav_0925 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001412205.1 992703 D 402881 CDS YP_001412206.1 154251382 5454918 993747..994418 1 NC_009719.1 PFAM: nitroreductase; KEGG: reu:Reut_B3607 nitroreductase; nitroreductase 994418 5454918 Plav_0926 Parvibaculum lavamentivorans DS-1 nitroreductase YP_001412206.1 993747 D 402881 CDS YP_001412207.1 154251383 5455735 994491..994844 1 NC_009719.1 PFAM: Propeptide PepSY amd peptidase M4; peptidase 994844 5455735 Plav_0927 Parvibaculum lavamentivorans DS-1 peptidase YP_001412207.1 994491 D 402881 CDS YP_001412208.1 154251384 5455810 994875..995546 1 NC_009719.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: atc:AGR_C_1778 PopP protein; two component transcriptional regulator 995546 5455810 Plav_0928 Parvibaculum lavamentivorans DS-1 two component transcriptional regulator YP_001412208.1 994875 D 402881 CDS YP_001412209.1 154251385 5455909 995536..996915 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bra:BRADO2729 putative two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 996915 5455909 Plav_0929 Parvibaculum lavamentivorans DS-1 integral membrane sensor signal transduction histidine kinase YP_001412209.1 995536 D 402881 CDS YP_001412210.1 154251386 5455742 997010..997507 1 NC_009719.1 PFAM: 17 kDa surface antigen; KEGG: rbe:RBE_1424 17 kD surface antigen precursor; 17 kDa surface antigen 997507 5455742 Plav_0930 Parvibaculum lavamentivorans DS-1 17 kDa surface antigen YP_001412210.1 997010 D 402881 CDS YP_001412211.1 154251387 5456525 complement(998098..999477) 1 NC_009719.1 TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: maq:Maqu_3053 putative ribonuclease BN; putative ribonuclease BN 999477 5456525 Plav_0931 Parvibaculum lavamentivorans DS-1 putative ribonuclease BN YP_001412211.1 998098 R 402881 CDS YP_001412212.1 154251388 5456974 complement(999617..999823) 1 NC_009719.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pde:Pden_0954 putative cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 999823 5456974 Plav_0932 Parvibaculum lavamentivorans DS-1 cold-shock DNA-binding domain-containing protein YP_001412212.1 999617 R 402881 CDS YP_001412213.1 154251389 5456820 1000115..1001536 1 NC_009719.1 KEGG: rpc:RPC_1833 hypothetical protein; hypothetical protein 1001536 5456820 Plav_0933 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412213.1 1000115 D 402881 CDS YP_001412214.1 154251390 5456706 complement(1001541..1002557) 1 NC_009719.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bbr:BB4545 D-cysteine desulfhydrase; 1-aminocyclopropane-1-carboxylate deaminase 1002557 5456706 Plav_0934 Parvibaculum lavamentivorans DS-1 1-aminocyclopropane-1-carboxylate deaminase YP_001412214.1 1001541 R 402881 CDS YP_001412215.1 154251391 5456088 complement(1002561..1003784) 1 NC_009719.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bja:bll6906 putative isomerase; L-carnitine dehydratase/bile acid-inducible protein F 1003784 5456088 Plav_0935 Parvibaculum lavamentivorans DS-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001412215.1 1002561 R 402881 CDS YP_001412216.1 154251392 5457012 1003969..1005822 1 NC_009719.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: mag:amb0567 signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 1005822 5457012 Plav_0936 Parvibaculum lavamentivorans DS-1 multi-sensor signal transduction histidine kinase YP_001412216.1 1003969 D 402881 CDS YP_001412217.1 154251393 5453699 complement(1005825..1007999) 1 NC_009719.1 PFAM: peptidase S45 penicillin amidase; KEGG: penicillin amidase family protein; glutaryl-7-aminocephalosporanic-acid acylase 1007999 5453699 Plav_0937 Parvibaculum lavamentivorans DS-1 glutaryl-7-aminocephalosporanic-acid acylase YP_001412217.1 1005825 R 402881 CDS YP_001412218.1 154251394 5456918 1008149..1009231 1 NC_009719.1 SMART: Tetratricopeptide domain protein; KEGG: rpe:RPE_1932 tetratricopeptide TPR_2; hypothetical protein 1009231 5456918 Plav_0938 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412218.1 1008149 D 402881 CDS YP_001412219.1 154251395 5453876 1009288..1010220 1 NC_009719.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: dar:Daro_2852 hypothetical protein; peptidoglycan-binding domain-containing protein 1010220 5453876 Plav_0939 Parvibaculum lavamentivorans DS-1 peptidoglycan-binding domain-containing protein YP_001412219.1 1009288 D 402881 CDS YP_001412220.1 154251396 5454202 1010334..1010816 1 NC_009719.1 PFAM: CcmE/CycJ protein; KEGG: nha:Nham_1438 CcmE/CycJ protein; CcmE/CycJ protein 1010816 5454202 Plav_0940 Parvibaculum lavamentivorans DS-1 CcmE/CycJ protein YP_001412220.1 1010334 D 402881 CDS YP_001412221.1 154251397 5453368 1010813..1012795 1 NC_009719.1 TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: rpc:RPC_1836 cytochrome c-type biogenesis protein CcmF; cytochrome c-type biogenesis protein CcmF 1012795 5453368 Plav_0941 Parvibaculum lavamentivorans DS-1 cytochrome c-type biogenesis protein CcmF YP_001412221.1 1010813 D 402881 CDS YP_001412222.1 154251398 5455971 1012800..1013273 1 NC_009719.1 PFAM: cytochrome C biogenesis protein; KEGG: bja:blr3128 cytochrome C-type biogenesis protein; cytochrome C biogenesis protein 1013273 5455971 Plav_0942 Parvibaculum lavamentivorans DS-1 cytochrome C biogenesis protein YP_001412222.1 1012800 D 402881 CDS YP_001412223.1 154251399 5454152 1013426..1014901 1 NC_009719.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bme:BMEI1330 protease do; protease Do 1014901 5454152 Plav_0943 Parvibaculum lavamentivorans DS-1 protease Do YP_001412223.1 1013426 D 402881 CDS YP_001412224.1 154251400 5453464 1014934..1015611 1 NC_009719.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mmr:Mmar10_0943 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1015611 5453464 Plav_0944 Parvibaculum lavamentivorans DS-1 two component transcriptional regulator YP_001412224.1 1014934 D 402881 CDS YP_001412225.1 154251401 5454803 1015598..1016998 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpa:RPA1932 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 1016998 5454803 Plav_0945 Parvibaculum lavamentivorans DS-1 integral membrane sensor signal transduction histidine kinase YP_001412225.1 1015598 D 402881 CDS YP_001412226.1 154251402 5456243 1017042..1019990 1 NC_009719.1 PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: mag:amb2683 glutamine synthetase adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 1019990 5456243 Plav_0946 Parvibaculum lavamentivorans DS-1 (glutamate--ammonia-ligase) adenylyltransferase YP_001412226.1 1017042 D 402881 CDS YP_001412227.1 154251403 5453396 1020220..1021818 1 NC_009719.1 PFAM: FAD dependent oxidoreductase; KEGG: mlo:mlr3674 phytoene dehydrogenase; FAD dependent oxidoreductase 1021818 5453396 Plav_0947 Parvibaculum lavamentivorans DS-1 FAD dependent oxidoreductase YP_001412227.1 1020220 D 402881 CDS YP_001412228.1 154251404 5453399 1021822..1023432 1 NC_009719.1 PFAM: amine oxidase; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mlo:mlr3676 phytoene dehydrogenase; FAD dependent oxidoreductase 1023432 5453399 Plav_0948 Parvibaculum lavamentivorans DS-1 FAD dependent oxidoreductase YP_001412228.1 1021822 D 402881 CDS YP_001412229.1 154251405 5454438 1023429..1024730 1 NC_009719.1 PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mlo:mlr3677 aminomethyltransferase; glycine cleavage T protein (aminomethyl transferase) 1024730 5454438 Plav_0949 Parvibaculum lavamentivorans DS-1 glycine cleavage T protein (aminomethyl transferase) YP_001412229.1 1023429 D 402881 CDS YP_001412230.1 154251406 5456387 1024901..1025629 1 NC_009719.1 PFAM: Calcium-binding EF-hand-containing protein; KEGG: hne:HNE_1317 EF hand domain protein; signal transduction protein 1025629 5456387 Plav_0950 Parvibaculum lavamentivorans DS-1 signal transduction protein YP_001412230.1 1024901 D 402881 CDS YP_001412231.1 154251407 5456528 1025667..1026323 1 NC_009719.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 1026323 5456528 Plav_0951 Parvibaculum lavamentivorans DS-1 ECF subfamily RNA polymerase sigma-24 factor YP_001412231.1 1025667 D 402881 CDS YP_001412232.1 154251408 5455754 1026349..1026858 1 NC_009719.1 KEGG: mgm:Mmc1_3543 hypothetical protein; hypothetical protein 1026858 5455754 Plav_0952 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412232.1 1026349 D 402881 CDS YP_001412233.1 154251409 5455300 1026855..1027388 1 NC_009719.1 KEGG: rsp:RSP_0414 hypothetical protein; hypothetical protein 1027388 5455300 Plav_0953 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412233.1 1026855 D 402881 CDS YP_001412234.1 154251410 5454794 1027406..1028743 1 NC_009719.1 PFAM: FAD dependent oxidoreductase; KEGG: cya:CYA_1308 oxidoreductase, FAD-dependent; FAD dependent oxidoreductase 1028743 5454794 Plav_0954 Parvibaculum lavamentivorans DS-1 FAD dependent oxidoreductase YP_001412234.1 1027406 D 402881 CDS YP_001412235.1 154251411 5456547 1028816..1030201 1 NC_009719.1 PFAM: glutamine synthetase catalytic region; KEGG: pau:PA14_03860 putative glutamine synthetase; glutamine synthetase 1030201 5456547 Plav_0955 Parvibaculum lavamentivorans DS-1 glutamine synthetase YP_001412235.1 1028816 D 402881 CDS YP_001412236.1 154251412 5454665 complement(1030252..1032054) 1 NC_009719.1 KEGG: rpe:RPE_1951 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 1032054 5454665 Plav_0956 Parvibaculum lavamentivorans DS-1 PAS/PAC sensor signal transduction histidine kinase YP_001412236.1 1030252 R 402881 CDS YP_001412237.1 154251413 5453413 complement(1032457..1035093) 1 NC_009719.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: noc:Noc_1314 peptidase M, neutral zinc metallopeptidase, zinc-binding site; aminopeptidase N 1035093 pepN 5453413 pepN Parvibaculum lavamentivorans DS-1 aminopeptidase N YP_001412237.1 1032457 R 402881 CDS YP_001412238.1 154251414 5456713 1035275..1035901 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dge:Dgeo_1160 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1035901 5456713 Plav_0958 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001412238.1 1035275 D 402881 CDS YP_001412239.1 154251415 5455566 complement(1035882..1036418) 1 NC_009719.1 KEGG: mmr:Mmar10_0953 hypothetical protein; hypothetical protein 1036418 5455566 Plav_0959 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412239.1 1035882 R 402881 CDS YP_001412240.1 154251416 5455595 complement(1036695..1039838) 1 NC_009719.1 PFAM: acriflavin resistance protein; KEGG: ade:Adeh_1476 acriflavin resistance protein; acriflavin resistance protein 1039838 5455595 Plav_0960 Parvibaculum lavamentivorans DS-1 acriflavin resistance protein YP_001412240.1 1036695 R 402881 CDS YP_001412241.1 154251417 5456214 complement(1039859..1041028) 1 NC_009719.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bpa:BPP3833 putative HlyD-like secretion protein; RND family efflux transporter MFP subunit 1041028 5456214 Plav_0961 Parvibaculum lavamentivorans DS-1 RND family efflux transporter MFP subunit YP_001412241.1 1039859 R 402881 CDS YP_001412242.1 154251418 5456956 1041139..1041636 1 NC_009719.1 PFAM: regulatory protein MarR; KEGG: mlo:mlr8230 transcriptional regulator; MarR family transcriptional regulator 1041636 5456956 Plav_0962 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001412242.1 1041139 D 402881 CDS YP_001412243.1 154251419 5456292 1041668..1042939 1 NC_009719.1 PFAM: beta-lactamase; KEGG: syn:sll1167 penicillin-binding protein 4; beta-lactamase 1042939 5456292 Plav_0963 Parvibaculum lavamentivorans DS-1 beta-lactamase YP_001412243.1 1041668 D 402881 CDS YP_001412244.1 154251420 5454606 1043115..1044242 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpa:RPA1708 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1044242 5454606 Plav_0964 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001412244.1 1043115 D 402881 CDS YP_001412245.1 154251421 5454372 1044356..1045585 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein 1045585 5454372 Plav_0965 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001412245.1 1044356 D 402881 CDS YP_001412246.1 154251422 5453588 complement(1045716..1046375) 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: mxa:MXAN_0089 glutathione S-transferase domain protein; glutathione S-transferase domain-containing protein 1046375 5453588 Plav_0966 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001412246.1 1045716 R 402881 CDS YP_001412247.1 154251423 5455592 complement(1046407..1047207) 1 NC_009719.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: bbr:BB0213 hypothetical protein; hypothetical protein 1047207 5455592 Plav_0967 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412247.1 1046407 R 402881 CDS YP_001412248.1 154251424 5454549 1047300..1047737 1 NC_009719.1 PFAM: regulatory protein MarR; KEGG: swi:Swit_4489 transcriptional regulator, MarR family; MarR family transcriptional regulator 1047737 5454549 Plav_0968 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001412248.1 1047300 D 402881 CDS YP_001412249.1 154251425 5453434 complement(1047982..1048680) 1 NC_009719.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: swi:Swit_2164 methyltransferase type 12; type 12 methyltransferase 1048680 5453434 Plav_0969 Parvibaculum lavamentivorans DS-1 type 12 methyltransferase YP_001412249.1 1047982 R 402881 CDS YP_001412250.1 154251426 5454236 complement(1048670..1049134) 1 NC_009719.1 PFAM: protein of unknown function UPF0074; KEGG: bja:blr7974 hypothetical protein; BadM/Rrf2 family transcriptional regulator 1049134 5454236 Plav_0970 Parvibaculum lavamentivorans DS-1 BadM/Rrf2 family transcriptional regulator YP_001412250.1 1048670 R 402881 CDS YP_001412251.1 154251427 5454564 1049633..1050361 1 NC_009719.1 KEGG: bbt:BBta_p0020 hypothetical protein; hypothetical protein 1050361 5454564 Plav_0971 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412251.1 1049633 D 402881 CDS YP_001412252.1 154251428 5453858 complement(1050376..1050882) 1 NC_009719.1 KEGG: nwi:Nwi_0260 hypothetical protein; hypothetical protein 1050882 5453858 Plav_0972 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412252.1 1050376 R 402881 CDS YP_001412253.1 154251429 5453910 complement(1050967..1051284) 1 NC_009719.1 KEGG: bja:blr4654 hypothetical protein; hypothetical protein 1051284 5453910 Plav_0973 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412253.1 1050967 R 402881 CDS YP_001412254.1 154251430 5456338 complement(1051281..1052231) 1 NC_009719.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: bja:blr4653 molecular chaperone DnaJ family; chaperone DnaJ domain-containing protein 1052231 5456338 Plav_0974 Parvibaculum lavamentivorans DS-1 chaperone DnaJ domain-containing protein YP_001412254.1 1051281 R 402881 CDS YP_001412255.1 154251431 5456605 1052595..1054043 1 NC_009719.1 PFAM: Lytic transglycosylase catalytic; SMART: extracellular solute-binding protein family 3; KEGG: mmr:Mmar10_1005 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 1054043 5456605 Plav_0975 Parvibaculum lavamentivorans DS-1 lytic transglycosylase catalytic subunit YP_001412255.1 1052595 D 402881 CDS YP_001412256.1 154251432 5457038 1054191..1054823 1 NC_009719.1 PFAM: OmpW family protein; KEGG: mmr:Mmar10_0595 OmpW family protein; OmpW family protein 1054823 5457038 Plav_0976 Parvibaculum lavamentivorans DS-1 OmpW family protein YP_001412256.1 1054191 D 402881 CDS YP_001412257.1 154251433 5457034 1054974..1056473 1 NC_009719.1 KEGG: pae:PA2097 probable flavin-binding monooxygenase; putative flavin-binding monooxygenase 1056473 5457034 Plav_0977 Parvibaculum lavamentivorans DS-1 putative flavin-binding monooxygenase YP_001412257.1 1054974 D 402881 CDS YP_001412258.1 154251434 5455511 1056575..1057066 1 NC_009719.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1057066 5455511 Plav_0978 Parvibaculum lavamentivorans DS-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001412258.1 1056575 D 402881 CDS YP_001412259.1 154251435 5455557 complement(1057075..1058943) 1 NC_009719.1 PFAM: Alkaline phosphatase; KEGG: she:Shewmr4_3312 twin-arginine translocation pathway signal; alkaline phosphatase 1058943 5455557 Plav_0979 Parvibaculum lavamentivorans DS-1 alkaline phosphatase YP_001412259.1 1057075 R 402881 CDS YP_001412260.1 154251436 5456422 1059130..1060032 1 NC_009719.1 PFAM: PfkB domain protein; KEGG: gsu:GSU0692 carbohydrate kinase, PfkB family; ribokinase-like domain-containing protein 1060032 5456422 Plav_0980 Parvibaculum lavamentivorans DS-1 ribokinase-like domain-containing protein YP_001412260.1 1059130 D 402881 CDS YP_001412261.1 154251437 5454404 complement(1060022..1062397) 1 NC_009719.1 PFAM: helix-turn-helix- domain containing protein AraC type; Acetamidase/Formamidase; KEGG: bxe:Bxe_B0602 transcriptional regulator, AraC family with acetamidase/formamidase activity; helix-turn-helix domain-containing protein 1062397 5454404 Plav_0981 Parvibaculum lavamentivorans DS-1 helix-turn-helix domain-containing protein YP_001412261.1 1060022 R 402881 CDS YP_001412262.1 154251438 5456729 complement(1062592..1063671) 1 NC_009719.1 PFAM: Acetamidase/Formamidase; KEGG: bxe:Bxe_B0603 predicted acetamidase/formamidase; acetamidase/formamidase 1063671 5456729 Plav_0982 Parvibaculum lavamentivorans DS-1 acetamidase/formamidase YP_001412262.1 1062592 R 402881 CDS YP_001412263.1 154251439 5456151 complement(1063863..1064654) 1 NC_009719.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: ecv:APECO1_3372 hypothetical protein; extradiol ring-cleavage dioxygenase class III protein subunit B 1064654 5456151 Plav_0983 Parvibaculum lavamentivorans DS-1 extradiol ring-cleavage dioxygenase class III protein subunit B YP_001412263.1 1063863 R 402881 CDS YP_001412264.1 154251440 5453788 complement(1064681..1065865) 1 NC_009719.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: sil:SPO3681 Rieske 2Fe-2S domain protein; Rieske (2Fe-2S) domain-containing protein 1065865 5453788 Plav_0984 Parvibaculum lavamentivorans DS-1 Rieske (2Fe-2S) domain-containing protein YP_001412264.1 1064681 R 402881 CDS YP_001412265.1 154251441 5454585 1066198..1066806 1 NC_009719.1 PFAM: NADPH-dependent FMN reductase; KEGG: pmy:Pmen_1997 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1066806 5454585 Plav_0985 Parvibaculum lavamentivorans DS-1 NADPH-dependent FMN reductase YP_001412265.1 1066198 D 402881 CDS YP_001412266.1 154251442 5456035 1066930..1067745 1 NC_009719.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bja:blr0937 putative dioxygenase; taurine dioxygenase 1067745 5456035 Plav_0986 Parvibaculum lavamentivorans DS-1 taurine dioxygenase YP_001412266.1 1066930 D 402881 CDS YP_001412267.1 154251443 5454763 complement(1067761..1068606) 1 NC_009719.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mes:Meso_2942 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1068606 5454763 Plav_0987 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001412267.1 1067761 R 402881 CDS YP_001412268.1 154251444 5454566 complement(1068640..1069494) 1 NC_009719.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: rme:Rmet_4136 taurine catabolism dioxygenase TauD/TfdA; taurine catabolism dioxygenase TauD/TfdA 1069494 5454566 Plav_0988 Parvibaculum lavamentivorans DS-1 taurine catabolism dioxygenase TauD/TfdA YP_001412268.1 1068640 R 402881 CDS YP_001412269.1 154251445 5455730 1070065..1072539 1 NC_009719.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: TonB-dependent receptor; K02014 iron complex outermembrane recepter protein; TonB-dependent receptor plug 1072539 5455730 Plav_0989 Parvibaculum lavamentivorans DS-1 TonB-dependent receptor plug YP_001412269.1 1070065 D 402881 CDS YP_001412270.1 154251446 5454802 1072593..1073930 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: plu:plu3814 hypothetical protein; major facilitator superfamily transporter 1073930 5454802 Plav_0990 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001412270.1 1072593 D 402881 CDS YP_001412271.1 154251447 5456054 1073980..1075047 1 NC_009719.1 PFAM: luciferase family protein; KEGG: plu:plu3815 hypothetical protein; luciferase family protein 1075047 5456054 Plav_0991 Parvibaculum lavamentivorans DS-1 luciferase family protein YP_001412271.1 1073980 D 402881 CDS YP_001412272.1 154251448 5454752 1075044..1075718 1 NC_009719.1 PFAM: isochorismatase hydrolase; KEGG: hne:HNE_1257 isochorismatase family protein; isochorismatase hydrolase 1075718 5454752 Plav_0992 Parvibaculum lavamentivorans DS-1 isochorismatase hydrolase YP_001412272.1 1075044 D 402881 CDS YP_001412273.1 154251449 5454531 1075711..1077081 1 NC_009719.1 KEGG: hne:HNE_1256 hypothetical protein; hypothetical protein 1077081 5454531 Plav_0993 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412273.1 1075711 D 402881 CDS YP_001412274.1 154251450 5454374 1077112..1077633 1 NC_009719.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: mag:amb2577 actinorhodin polyketide dimerase; flavin reductase domain-containing protein 1077633 5454374 Plav_0994 Parvibaculum lavamentivorans DS-1 flavin reductase domain-containing protein YP_001412274.1 1077112 D 402881 CDS YP_001412275.1 154251451 5457003 1077735..1078361 1 NC_009719.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: mag:amb3549 periplasmic protein TonB, links inner and outer membranes; TonB family protein 1078361 5457003 Plav_0995 Parvibaculum lavamentivorans DS-1 TonB family protein YP_001412275.1 1077735 D 402881 CDS YP_001412276.1 154251452 5456735 1078432..1079331 1 NC_009719.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mpt:Mpe_A1755 biopolymer transport ExbB protein; MotA/TolQ/ExbB proton channel 1079331 5456735 Plav_0996 Parvibaculum lavamentivorans DS-1 MotA/TolQ/ExbB proton channel YP_001412276.1 1078432 D 402881 CDS YP_001412277.1 154251453 5456414 1079360..1079785 1 NC_009719.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: azo:azo0233 putative biopolymer transport protein ExbD; biopolymer transport protein ExbD/TolR 1079785 5456414 Plav_0997 Parvibaculum lavamentivorans DS-1 biopolymer transport protein ExbD/TolR YP_001412277.1 1079360 D 402881 CDS YP_001412278.1 154251454 5455831 1079798..1080223 1 NC_009719.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: cvi:CV1986 biopolymer transport exbD transmembrane protein; biopolymer transport protein ExbD/TolR 1080223 5455831 Plav_0998 Parvibaculum lavamentivorans DS-1 biopolymer transport protein ExbD/TolR YP_001412278.1 1079798 D 402881 CDS YP_001412279.1 154251455 5456677 complement(1080333..1081280) 1 NC_009719.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psa:PST_2196 probable transcriptional regulator; LysR family transcriptional regulator 1081280 5456677 Plav_0999 Parvibaculum lavamentivorans DS-1 LysR family transcriptional regulator YP_001412279.1 1080333 R 402881 CDS YP_001412280.1 154251456 5456359 1081580..1082902 1 NC_009719.1 PFAM: outer membrane efflux protein; KEGG: bam:Bamb_6370 type I secretion outer membrane protein, TolC family; outer membrane efflux protein 1082902 5456359 Plav_1000 Parvibaculum lavamentivorans DS-1 outer membrane efflux protein YP_001412280.1 1081580 D 402881 CDS YP_001412281.1 154251457 5455818 1082979..1092956 1 NC_009719.1 PFAM: C-type lectin domain protein; KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein; C-type lectin domain-containing protein 1092956 5455818 Plav_1001 Parvibaculum lavamentivorans DS-1 C-type lectin domain-containing protein YP_001412281.1 1082979 D 402881 CDS YP_001412282.1 154251458 5456389 1092966..1095134 1 NC_009719.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: reh:H16_B0690 ABC-type RTX toxin transporter, ATPase and permease components: Prot1E family; ABC transporter-like protein 1095134 5456389 Plav_1002 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001412282.1 1092966 D 402881 CDS YP_001412283.1 154251459 5456439 1095131..1096450 1 NC_009719.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_6372 type I secretion membrane fusion protein, HlyD family; HlyD family type I secretion membrane fusion protein 1096450 5456439 Plav_1003 Parvibaculum lavamentivorans DS-1 HlyD family type I secretion membrane fusion protein YP_001412283.1 1095131 D 402881 CDS YP_001412284.1 154251460 5456366 1097426..1099735 1 NC_009719.1 KEGG: swi:Swit_5200 putative nitric-oxide reductase; putative nitric-oxide reductase 1099735 5456366 Plav_1004 Parvibaculum lavamentivorans DS-1 putative nitric-oxide reductase YP_001412284.1 1097426 D 402881 CDS YP_001412285.1 154251461 5456740 1099773..1100183 1 NC_009719.1 KEGG: azo:azo3083 conserved hypothetical membrane protein; hypothetical protein 1100183 5456740 Plav_1005 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412285.1 1099773 D 402881 CDS YP_001412286.1 154251462 5456610 complement(1100186..1101355) 1 NC_009719.1 PFAM: NnrS family protein; KEGG: rde:RD1_1694 NnrS protein, putative; NnrS family protein 1101355 5456610 Plav_1006 Parvibaculum lavamentivorans DS-1 NnrS family protein YP_001412286.1 1100186 R 402881 CDS YP_001412287.1 154251463 5456306 1101424..1101900 1 NC_009719.1 KEGG: hne:HNE_1549 hypothetical protein; hypothetical protein 1101900 5456306 Plav_1007 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412287.1 1101424 D 402881 CDS YP_001412288.1 154251464 5457013 complement(1101910..1102362) 1 NC_009719.1 TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain protein; KEGG: mes:Meso_4276 pseudoazurin; pseudoazurin 1102362 5457013 Plav_1008 Parvibaculum lavamentivorans DS-1 pseudoazurin YP_001412288.1 1101910 R 402881 CDS YP_001412289.1 154251465 5457025 complement(1102440..1103492) 1 NC_009719.1 TIGRFAM: nitrite reductase, copper-containing; PFAM: multicopper oxidase type 2; KEGG: pna:Pnap_1326 nitrite reductase, copper-containing; nitrite reductase 1103492 5457025 Plav_1009 Parvibaculum lavamentivorans DS-1 nitrite reductase YP_001412289.1 1102440 R 402881 CDS YP_001412290.1 154251466 5456452 1103552..1104325 1 NC_009719.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rpa:RPA4143 putative nitric oxide responsive transcriptional regulator NnrR, Crp/Fnr family; CRP/FNR family transcriptional regulator 1104325 5456452 Plav_1010 Parvibaculum lavamentivorans DS-1 CRP/FNR family transcriptional regulator YP_001412290.1 1103552 D 402881 CDS YP_001412291.1 154251467 5456576 1104407..1104628 1 NC_009719.1 KEGG: rsq:Rsph17025_0969 hypothetical protein; hypothetical protein 1104628 5456576 Plav_1011 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412291.1 1104407 D 402881 CDS YP_001412292.1 154251468 5456497 1105014..1105103 1 NC_009719.1 TIGRFAM: K+-transporting ATPase, F subunit; K+-transporting ATPase subunit F 1105103 5456497 Plav_1012 Parvibaculum lavamentivorans DS-1 K+-transporting ATPase subunit F YP_001412292.1 1105014 D 402881 CDS YP_001412293.1 154251469 5455297 1105141..1107258 1 NC_009719.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rpc:RPC_4549 potassium-translocating P-type ATPase, B subunit; K+-transporting ATPase subunit B 1107258 5455297 Plav_1013 Parvibaculum lavamentivorans DS-1 K+-transporting ATPase subunit B YP_001412293.1 1105141 D 402881 CDS YP_001412294.1 154251470 5456307 1107384..1109066 1 NC_009719.1 TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: K transporting ATPase A subunit; KEGG: rsq:Rsph17025_3784 osmosensitive K+ channel histidine kinase-like protein; potassium-transporting ATPase subunit A 1109066 5456307 Plav_1014 Parvibaculum lavamentivorans DS-1 potassium-transporting ATPase subunit A YP_001412294.1 1107384 D 402881 CDS YP_001412295.1 154251471 5456396 1109088..1109651 1 NC_009719.1 PFAM: K transporting ATPase KdpC subunit; KEGG: rsq:Rsph17025_3785 osmosensitive K+ channel His kinase sensor; potassium-transporting ATPase 1109651 5456396 Plav_1015 Parvibaculum lavamentivorans DS-1 potassium-transporting ATPase YP_001412295.1 1109088 D 402881 CDS YP_001412296.1 154251472 5456816 1112433..1113122 1 NC_009719.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bra:BRADO5826 response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family); two component transcriptional regulator 1113122 5456816 Plav_1017 Parvibaculum lavamentivorans DS-1 two component transcriptional regulator YP_001412296.1 1112433 D 402881 CDS YP_001412297.1 154251473 5456591 1113770..1114663 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swi:Swit_1612 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1114663 5456591 Plav_1018 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001412297.1 1113770 D 402881 CDS YP_001412298.1 154251474 5455267 1114790..1116292 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: eli:ELI_00290 hypothetical protein; major facilitator superfamily transporter 1116292 5455267 Plav_1019 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001412298.1 1114790 D 402881 CDS YP_001412299.1 154251475 5456428 1116417..1117238 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: swi:Swit_0378 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1117238 5456428 Plav_1020 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001412299.1 1116417 D 402881 CDS YP_001412300.1 154251476 5456334 1117268..1118089 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: swi:Swit_0378 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1118089 5456334 Plav_1021 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001412300.1 1117268 D 402881 CDS YP_001412301.1 154251477 5456965 complement(1118135..1119871) 1 NC_009719.1 PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: hne:HNE_3525 amidohydrolase family protein/D-aminoacylase domain protein; amidohydrolase 3 1119871 5456965 Plav_1022 Parvibaculum lavamentivorans DS-1 amidohydrolase 3 YP_001412301.1 1118135 R 402881 CDS YP_001412302.1 154251478 5456962 1120530..1122356 1 NC_009719.1 PFAM: protein of unknown function DUF1302; KEGG: pau:PA14_19810 hypothetical protein; hypothetical protein 1122356 5456962 Plav_1023 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412302.1 1120530 D 402881 CDS YP_001412303.1 154251479 5454124 1122701..1124116 1 NC_009719.1 PFAM: aldehyde dehydrogenase; KEGG: nar:Saro_2503 aldehyde dehydrogenase (NAD+); aldehyde dehydrogenase 1124116 5454124 Plav_1024 Parvibaculum lavamentivorans DS-1 aldehyde dehydrogenase YP_001412303.1 1122701 D 402881 CDS YP_001412304.1 154251480 5456390 1124119..1125615 1 NC_009719.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bra:BRADO6529 putative acyl-CoA ligase; AMP-dependent synthetase and ligase 1125615 5456390 Plav_1025 Parvibaculum lavamentivorans DS-1 AMP-dependent synthetase and ligase YP_001412304.1 1124119 D 402881 CDS YP_001412305.1 154251481 5454882 1125620..1126810 1 NC_009719.1 KEGG: bxe:Bxe_B2367 hypothetical protein; hypothetical protein 1126810 5454882 Plav_1026 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412305.1 1125620 D 402881 CDS YP_001412306.1 154251482 5456411 1126810..1127337 1 NC_009719.1 PFAM: protein of unknown function DUF35; KEGG: bxe:Bxe_B2366 hypothetical protein; hypothetical protein 1127337 5456411 Plav_1027 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412306.1 1126810 D 402881 CDS YP_001412307.1 154251483 5456555 complement(1127442..1128284) 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swi:Swit_0341 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1128284 5456555 Plav_1028 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001412307.1 1127442 R 402881 CDS YP_001412308.1 154251484 5456566 complement(1128427..1129926) 1 NC_009719.1 PFAM: AMP-dependent synthetase and ligase; KEGG: swi:Swit_1600 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1129926 5456566 Plav_1029 Parvibaculum lavamentivorans DS-1 AMP-dependent synthetase and ligase YP_001412308.1 1128427 R 402881 CDS YP_001412309.1 154251485 5456575 1130029..1130301 1 NC_009719.1 hypothetical protein 1130301 5456575 Plav_1030 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412309.1 1130029 D 402881 CDS YP_001412310.1 154251486 5456453 1130337..1131452 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: hne:HNE_2915 acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein 1131452 5456453 Plav_1031 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001412310.1 1130337 D 402881 CDS YP_001412311.1 154251487 5455751 1131467..1132702 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein 1132702 5455751 Plav_1032 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001412311.1 1131467 D 402881 CDS YP_001412312.1 154251488 5456734 complement(1132773..1133690) 1 NC_009719.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eli:ELI_10750 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 1133690 5456734 Plav_1033 Parvibaculum lavamentivorans DS-1 LysR family transcriptional regulator YP_001412312.1 1132773 R 402881 CDS YP_001412313.1 154251489 5456606 complement(1133787..1135274) 1 NC_009719.1 PFAM: AMP-dependent synthetase and ligase; KEGG: swi:Swit_1600 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1135274 5456606 Plav_1034 Parvibaculum lavamentivorans DS-1 AMP-dependent synthetase and ligase YP_001412313.1 1133787 R 402881 CDS YP_001412314.1 154251490 5456571 1135523..1137352 1 NC_009719.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: sil:SPO0190 oxidoreductase, GMC family; glucose-methanol-choline oxidoreductase 1137352 5456571 Plav_1035 Parvibaculum lavamentivorans DS-1 glucose-methanol-choline oxidoreductase YP_001412314.1 1135523 D 402881 CDS YP_001412315.1 154251491 5456854 1137367..1138851 1 NC_009719.1 PFAM: aldehyde dehydrogenase; KEGG: aba:Acid345_1381 aldehyde dehydrogenase (NAD+); aldehyde dehydrogenase 1138851 5456854 Plav_1036 Parvibaculum lavamentivorans DS-1 aldehyde dehydrogenase YP_001412315.1 1137367 D 402881 CDS YP_001412316.1 154251492 5455374 1138862..1139353 1 NC_009719.1 PFAM: MaoC domain protein dehydratase; KEGG: reu:Reut_B3559 hypothetical protein; dehydratase 1139353 5455374 Plav_1037 Parvibaculum lavamentivorans DS-1 dehydratase YP_001412316.1 1138862 D 402881 CDS YP_001412317.1 154251493 5456369 1139359..1140543 1 NC_009719.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reu:Reut_B3560 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 1140543 5456369 Plav_1038 Parvibaculum lavamentivorans DS-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001412317.1 1139359 D 402881 CDS YP_001412318.1 154251494 5456321 1140997..1141956 1 NC_009719.1 PFAM: RES domain protein; KEGG: nha:Nham_1974 hypothetical protein; RES domain-containing protein 1141956 5456321 Plav_1039 Parvibaculum lavamentivorans DS-1 RES domain-containing protein YP_001412318.1 1140997 D 402881 CDS YP_001412319.1 154251495 5456659 1142481..1142711 1 NC_009719.1 hypothetical protein 1142711 5456659 Plav_1040 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412319.1 1142481 D 402881 CDS YP_001412320.1 154251496 5456305 1142729..1143304 1 NC_009719.1 hypothetical protein 1143304 5456305 Plav_1041 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412320.1 1142729 D 402881 CDS YP_001412321.1 154251497 5456850 1143309..1144595 1 NC_009719.1 hypothetical protein 1144595 5456850 Plav_1042 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412321.1 1143309 D 402881 CDS YP_001412322.1 154251498 5456647 1144595..1145974 1 NC_009719.1 KEGG: vvy:VVA0689 hypothetical protein; hypothetical protein 1145974 5456647 Plav_1043 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412322.1 1144595 D 402881 CDS YP_001412323.1 154251499 5456328 1145974..1147998 1 NC_009719.1 KEGG: rsh:Rsph17029_3200 ATPase-like protein; ATPase-like protein 1147998 5456328 Plav_1044 Parvibaculum lavamentivorans DS-1 ATPase-like protein YP_001412323.1 1145974 D 402881 CDS YP_001412324.1 154251500 5456450 1148000..1149187 1 NC_009719.1 hypothetical protein 1149187 5456450 Plav_1045 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412324.1 1148000 D 402881 CDS YP_001412325.1 154251501 5456360 1149284..1149526 1 NC_009719.1 TIGRFAM: putative addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: nwi:Nwi_3093 helix-turn-helix protein, CopG; CopG/Arc/MetJ family transcriptional regulator 1149526 5456360 Plav_1046 Parvibaculum lavamentivorans DS-1 CopG/Arc/MetJ family transcriptional regulator YP_001412325.1 1149284 D 402881 CDS YP_001412326.1 154251502 5456474 1149599..1149829 1 NC_009719.1 PFAM: plasmid stabilization system; KEGG: mlo:msr1301 hypothetical protein; plasmid stabilization system protein 1149829 5456474 Plav_1047 Parvibaculum lavamentivorans DS-1 plasmid stabilization system protein YP_001412326.1 1149599 D 402881 CDS YP_001412327.1 154251503 5456544 1150159..1153146 1 NC_009719.1 PFAM: SMC domain protein; KEGG: neu:NE2310 ABC transporter; SMC domain-containing protein 1153146 5456544 Plav_1048 Parvibaculum lavamentivorans DS-1 SMC domain-containing protein YP_001412327.1 1150159 D 402881 CDS YP_001412328.1 154251504 5456705 complement(1153403..1154545) 1 NC_009719.1 PFAM: integrase family protein; KEGG: hne:HNE_0292 site-specific recombinase, phage integrase family; integrase family protein 1154545 5456705 Plav_1049 Parvibaculum lavamentivorans DS-1 integrase family protein YP_001412328.1 1153403 R 402881 CDS YP_001412329.1 154251505 5456634 1154675..1155682 1 NC_009719.1 TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: bja:blr3734 tRNA-dihydrouridine synthase A; tRNA-dihydrouridine synthase A 1155682 5456634 Plav_1050 Parvibaculum lavamentivorans DS-1 tRNA-dihydrouridine synthase A YP_001412329.1 1154675 D 402881 CDS YP_001412330.1 154251506 5456941 1155736..1156569 1 NC_009719.1 PFAM: protein of unknown function DUF81; KEGG: atc:AGR_C_3499 hypothetical protein; hypothetical protein 1156569 5456941 Plav_1051 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412330.1 1155736 D 402881 CDS YP_001412331.1 154251507 5456494 complement(1156673..1157770) 1 NC_009719.1 PFAM: phospholipase/Carboxylesterase; KEGG: bja:bll1350 hypothetical protein; phospholipase/carboxylesterase 1157770 5456494 Plav_1052 Parvibaculum lavamentivorans DS-1 phospholipase/carboxylesterase YP_001412331.1 1156673 R 402881 CDS YP_001412332.1 154251508 5456496 complement(1157910..1159409) 1 NC_009719.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: bra:BRADO0757 putative phosphomannomutase/phosphoglucomutase (PMM / PGM); phosphoglucomutase/phosphomannomutase subunit alpha/beta 1159409 5456496 Plav_1053 Parvibaculum lavamentivorans DS-1 phosphoglucomutase/phosphomannomutase subunit alpha/beta YP_001412332.1 1157910 R 402881 CDS YP_001412333.1 154251509 5456278 complement(1159506..1160201) 1 NC_009719.1 KEGG: mlo:mlr0565 hypothetical protein; hypothetical protein 1160201 5456278 Plav_1054 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412333.1 1159506 R 402881 CDS YP_001412334.1 154251510 5456622 1160327..1161232 1 NC_009719.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bmb:BruAb1_1298 CobA, uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 1161232 5456622 Plav_1055 Parvibaculum lavamentivorans DS-1 uroporphyrin-III C-methyltransferase YP_001412334.1 1160327 D 402881 CDS YP_001412335.1 154251511 5456417 1161794..1162009 1 NC_009719.1 PFAM: PhnA protein; KEGG: plu:plu1533 unnamed protein product; similar to alkylphosphonate uptake protein PhnA; PhnA protein 1162009 5456417 Plav_1056 Parvibaculum lavamentivorans DS-1 PhnA protein YP_001412335.1 1161794 D 402881 CDS YP_001412336.1 154251512 5456380 complement(1162016..1162255) 1 NC_009719.1 PFAM: protein of unknown function DUF1289; KEGG: hne:HNE_2096 hypothetical protein; hypothetical protein 1162255 5456380 Plav_1057 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412336.1 1162016 R 402881 CDS YP_001412337.1 154251513 5456627 1162499..1163476 1 NC_009719.1 PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; KEGG: ret:RHE_CH02443 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase protein; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1163476 5456627 Plav_1058 Parvibaculum lavamentivorans DS-1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_001412337.1 1162499 D 402881 CDS YP_001412338.1 154251514 5456277 complement(1163480..1164034) 1 NC_009719.1 KEGG: bra:BRADO5009 putative intracellular septation protein; putative intracellular septation protein 1164034 5456277 Plav_1059 Parvibaculum lavamentivorans DS-1 putative intracellular septation protein YP_001412338.1 1163480 R 402881 CDS YP_001412339.1 154251515 5456433 1164392..1165585 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: hne:HNE_2094 acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein 1165585 5456433 Plav_1060 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001412339.1 1164392 D 402881 CDS YP_001412340.1 154251516 5456505 1165624..1166754 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: hne:HNE_2093 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1166754 5456505 Plav_1061 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001412340.1 1165624 D 402881 CDS YP_001412341.1 154251517 5456993 complement(1166858..1168387) 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sme:SMc04212 putative sensor histidine kinase transmembrane protein; integral membrane sensor signal transduction histidine kinase 1168387 5456993 Plav_1062 Parvibaculum lavamentivorans DS-1 integral membrane sensor signal transduction histidine kinase YP_001412341.1 1166858 R 402881 CDS YP_001412342.1 154251518 5456658 1168620..1169420 1 NC_009719.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1169420 5456658 Plav_1063 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase YP_001412342.1 1168620 D 402881 CDS YP_001412343.1 154251519 5456096 1169560..1169856 1 NC_009719.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: hne:HNE_2647 antibiotic biosynthesis monooxygenase domain protein; antibiotic biosynthesis monooxygenase 1169856 5456096 Plav_1064 Parvibaculum lavamentivorans DS-1 antibiotic biosynthesis monooxygenase YP_001412343.1 1169560 D 402881 CDS YP_001412344.1 154251520 5456222 1169880..1171088 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein 1171088 5456222 Plav_1065 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001412344.1 1169880 D 402881 CDS YP_001412345.1 154251521 5456352 complement(1171157..1173058) 1 NC_009719.1 PFAM: binding-protein-dependent transport systems inner membrane component; Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pcr:Pcryo_1086 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein 1173058 5456352 Plav_1066 Parvibaculum lavamentivorans DS-1 glycine betaine ABC transporter substrate-binding protein YP_001412345.1 1171157 R 402881 CDS YP_001412346.1 154251522 5456595 complement(1173135..1174040) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: 3-oxoacyl-(acyl-carrier-protein) reductase, putative; short-chain dehydrogenase/reductase SDR 1174040 5456595 Plav_1067 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001412346.1 1173135 R 402881 CDS YP_001412347.1 154251523 5456464 1174264..1175532 1 NC_009719.1 PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: bbt:BBta_5279 putative membrane protein of unknown function with nucleoside transporter domain; Na+ dependent nucleoside transporter 1175532 5456464 Plav_1068 Parvibaculum lavamentivorans DS-1 Na+ dependent nucleoside transporter YP_001412347.1 1174264 D 402881 CDS YP_001412348.1 154251524 5456478 1175554..1176165 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: hne:HNE_2566 glutathione S-transferase; glutathione S-transferase domain-containing protein 1176165 5456478 Plav_1069 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001412348.1 1175554 D 402881 CDS YP_001412349.1 154251525 5456504 1176412..1177827 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: mmr:Mmar10_0269 major facilitator superfamily MFS_1; major facilitator superfamily transporter 1177827 5456504 Plav_1070 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001412349.1 1176412 D 402881 CDS YP_001412350.1 154251526 5455957 1177834..1178262 1 NC_009719.1 PFAM: regulatory protein ArsR; KEGG: bja:blr0846 transcriptional regulatory protein; regulatory protein ArsR 1178262 5455957 Plav_1071 Parvibaculum lavamentivorans DS-1 regulatory protein ArsR YP_001412350.1 1177834 D 402881 CDS YP_001412351.1 154251527 5456602 1178272..1178643 1 NC_009719.1 PFAM: protein of unknown function DUF1428; KEGG: bba:Bd3653 alkaline phosphatase; hypothetical protein 1178643 5456602 Plav_1072 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412351.1 1178272 D 402881 CDS YP_001412352.1 154251528 5456684 1178654..1179379 1 NC_009719.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: pde:Pden_3150 protein of unknown function DUF899, thioredoxin family protein; hypothetical protein 1179379 5456684 Plav_1073 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412352.1 1178654 D 402881 CDS YP_001412353.1 154251529 5457022 complement(1179632..1180669) 1 NC_009719.1 PFAM: luciferase family protein; KEGG: bat:BAS1874 bacterial luciferase family protein; luciferase family protein 1180669 5457022 Plav_1074 Parvibaculum lavamentivorans DS-1 luciferase family protein YP_001412353.1 1179632 R 402881 CDS YP_001412354.1 154251530 5456753 complement(1180725..1181168) 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: hypothetical protein; thioesterase superfamily protein 1181168 5456753 Plav_1075 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001412354.1 1180725 R 402881 CDS YP_001412355.1 154251531 5455682 1181318..1181821 1 NC_009719.1 PFAM: protein of unknown function DUF1457; hypothetical protein 1181821 5455682 Plav_1076 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412355.1 1181318 D 402881 CDS YP_001412356.1 154251532 5453513 1181925..1182461 1 NC_009719.1 PFAM: protein of unknown function DUF1457; KEGG: sme:SMc01000 hypothetical protein; hypothetical protein 1182461 5453513 Plav_1077 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412356.1 1181925 D 402881 CDS YP_001412357.1 154251533 5457000 1182544..1183695 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mag:amb2599 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1183695 5457000 Plav_1078 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001412357.1 1182544 D 402881 CDS YP_001412358.1 154251534 5453970 complement(1183661..1184308) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: dde:Dde_1892 putative transcriptional regulator, TetR family; TetR family transcriptional regulator 1184308 5453970 Plav_1079 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001412358.1 1183661 R 402881 CDS YP_001412359.1 154251535 5453458 1184427..1185158 1 NC_009719.1 PFAM: Abortive infection protein; KEGG: ecs:ECs1085 hypothetical membrane protein; abortive infection protein 1185158 5453458 Plav_1080 Parvibaculum lavamentivorans DS-1 abortive infection protein YP_001412359.1 1184427 D 402881 CDS YP_001412360.1 154251536 5453968 1185266..1185802 1 NC_009719.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: mlo:mll0558 hypothetical protein; uracil-DNA glycosylase superfamily protein 1185802 5453968 Plav_1081 Parvibaculum lavamentivorans DS-1 uracil-DNA glycosylase superfamily protein YP_001412360.1 1185266 D 402881 CDS YP_001412361.1 154251537 5455462 1185811..1186815 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: mag:amb4214 lysophospholipase; alpha/beta hydrolase fold protein 1186815 5455462 Plav_1082 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001412361.1 1185811 D 402881 CDS YP_001412362.1 154251538 5455092 complement(1186826..1189282) 1 NC_009719.1 KEGG: pol:Bpro_2089 patatin; patatin 1189282 5455092 Plav_1083 Parvibaculum lavamentivorans DS-1 patatin YP_001412362.1 1186826 R 402881 CDS YP_001412363.1 154251539 5455725 1189701..1191188 1 NC_009719.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: bja:blr0257 two-component sensor histidine kinase; multi-sensor signal transduction histidine kinase 1191188 5455725 Plav_1084 Parvibaculum lavamentivorans DS-1 multi-sensor signal transduction histidine kinase YP_001412363.1 1189701 D 402881 CDS YP_001412364.1 154251540 5453953 1191666..1192037 1 NC_009719.1 PFAM: response regulator receiver; KEGG: bja:blr0259 two-component response regulator; response regulator receiver protein 1192037 5453953 Plav_1086 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001412364.1 1191666 D 402881 CDS YP_001412365.1 154251541 5456950 1192137..1193165 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: atc:AGR_L_210 non-heme chloroperoxidase (chloride peroxidase) (CPO-P) (chloroperoxidase P); alpha/beta hydrolase fold protein 1193165 5456950 Plav_1087 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001412365.1 1192137 D 402881 CDS YP_001412366.1 154251542 5454174 1193549..1194721 1 NC_009719.1 KEGG: mpt:Mpe_A0156 hypothetical protein; hypothetical protein 1194721 5454174 Plav_1088 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412366.1 1193549 D 402881 CDS YP_001412367.1 154251543 5453544 complement(1194718..1195401) 1 NC_009719.1 TIGRFAM: phosphoglycolate phosphatase ; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: swi:Swit_4555 phosphoglycolate phosphatase; phosphoglycolate phosphatase 1195401 5453544 Plav_1089 Parvibaculum lavamentivorans DS-1 phosphoglycolate phosphatase YP_001412367.1 1194718 R 402881 CDS YP_001412368.1 154251544 5453982 complement(1195446..1196039) 1 NC_009719.1 KEGG: mmr:Mmar10_0622 hypothetical protein; hypothetical protein 1196039 5453982 Plav_1090 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412368.1 1195446 R 402881 CDS YP_001412369.1 154251545 5453933 1196145..1196636 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: acr:Acry_1192 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1196636 5453933 Plav_1091 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001412369.1 1196145 D 402881 CDS YP_001412370.1 154251546 5455721 complement(1196643..1197818) 1 NC_009719.1 KEGG: bpa:BPP0341 hypothetical protein; hypothetical protein 1197818 5455721 Plav_1092 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412370.1 1196643 R 402881 CDS YP_001412371.1 154251547 5455480 1197935..1199395 1 NC_009719.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: reh:H16_B1537 succinate-semialdehyde dehydrogenase (NADP+); succinate-semialdehyde dehydrogenase 1199395 5455480 Plav_1093 Parvibaculum lavamentivorans DS-1 succinate-semialdehyde dehydrogenase YP_001412371.1 1197935 D 402881 CDS YP_001412372.1 154251548 5454793 1199399..1200094 1 NC_009719.1 TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; KEGG: bms:BR1010 ribose 5-phosphate isomerase A; ribose 5-phosphate isomerase 1200094 5454793 Plav_1094 Parvibaculum lavamentivorans DS-1 ribose 5-phosphate isomerase YP_001412372.1 1199399 D 402881 CDS YP_001412373.1 154251549 5456260 1200117..1201499 1 NC_009719.1 TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: mmr:Mmar10_0973 glutathione-disulfide reductase; glutathione-disulfide reductase 1201499 5456260 Plav_1095 Parvibaculum lavamentivorans DS-1 glutathione-disulfide reductase YP_001412373.1 1200117 D 402881 CDS YP_001412374.1 154251550 5456690 1201654..1203048 1 NC_009719.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II; KEGG: bja:blr3778 phospho-2-dehydro-3-deoxyheptonate aldolase; phospho-2-dehydro-3-deoxyheptonate aldolase 1203048 5456690 Plav_1096 Parvibaculum lavamentivorans DS-1 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001412374.1 1201654 D 402881 CDS YP_001412375.1 154251551 5454212 complement(1203102..1204115) 1 NC_009719.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: bra:BRADO3166 putative NADP-dependent oxidoreductase; alcohol dehydrogenase 1204115 5454212 Plav_1097 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001412375.1 1203102 R 402881 CDS YP_001412376.1 154251552 5456618 complement(1204191..1205216) 1 NC_009719.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: alcohol dehydrogenase, zinc-containing; alcohol dehydrogenase 1205216 5456618 Plav_1098 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001412376.1 1204191 R 402881 CDS YP_001412377.1 154251553 5454216 complement(1205334..1206716) 1 NC_009719.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rru:Rru_A3237 RND efflux system, outer membrane lipoprotein, NodT; RND efflux system outer membrane lipoprotein 1206716 5454216 Plav_1099 Parvibaculum lavamentivorans DS-1 RND efflux system outer membrane lipoprotein YP_001412377.1 1205334 R 402881 CDS YP_001412378.1 154251554 5456970 complement(1206725..1208686) 1 NC_009719.1 PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: rru:Rru_A3236 hypothetical protein; ABC transporter-like protein 1208686 5456970 Plav_1100 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001412378.1 1206725 R 402881 CDS YP_001412379.1 154251555 5456536 complement(1208697..1209941) 1 NC_009719.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: maq:Maqu_1339 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1209941 5456536 Plav_1101 Parvibaculum lavamentivorans DS-1 RND family efflux transporter MFP subunit YP_001412379.1 1208697 R 402881 CDS YP_001412380.1 154251556 5456270 complement(1210008..1211006) 1 NC_009719.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bja:blr0103 probable oxidoreductase; alcohol dehydrogenase 1211006 5456270 Plav_1102 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001412380.1 1210008 R 402881 CDS YP_001412381.1 154251557 5455956 1211195..1212859 1 NC_009719.1 TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD synthase; ExsB family protein; KEGG: bms:BR1015 NH(3)-dependent NAD+ synthetase; NAD+ synthetase 1212859 5455956 Plav_1103 Parvibaculum lavamentivorans DS-1 NAD+ synthetase YP_001412381.1 1211195 D 402881 CDS YP_001412382.1 154251558 5455819 1212856..1214205 1 NC_009719.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: mmr:Mmar10_0986 glutamyl-tRNA synthetase; glutamyl-tRNA synthetase 1214205 5455819 Plav_1104 Parvibaculum lavamentivorans DS-1 glutamyl-tRNA synthetase YP_001412382.1 1212856 D 402881 CDS YP_001412383.1 154251559 5455204 1214387..1216072 1 NC_009719.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: bra:BRADO4696 putative isopropylmalate synthase (LeuA-like); putative alpha-isopropylmalate/homocitrate synthase family transferase 1216072 5455204 Plav_1105 Parvibaculum lavamentivorans DS-1 putative alpha-isopropylmalate/homocitrate synthase family transferase YP_001412383.1 1214387 D 402881 CDS YP_001412384.1 154251560 5456470 complement(1216186..1216665) 1 NC_009719.1 KEGG: gvi:gll1194 hypothetical protein; hypothetical protein 1216665 5456470 Plav_1106 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412384.1 1216186 R 402881 CDS YP_001412385.1 154251561 5454597 complement(1216725..1217666) 1 NC_009719.1 PFAM: homocysteine S-methyltransferase; KEGG: mes:Meso_0624 homocysteine S-methyltransferase; homocysteine S-methyltransferase 1217666 5454597 Plav_1107 Parvibaculum lavamentivorans DS-1 homocysteine S-methyltransferase YP_001412385.1 1216725 R 402881 CDS YP_001412386.1 154251562 5457010 1217833..1218807 1 NC_009719.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reh:H16_B0937 transcriptional regulator, AraC-family; helix-turn-helix domain-containing protein 1218807 5457010 Plav_1108 Parvibaculum lavamentivorans DS-1 helix-turn-helix domain-containing protein YP_001412386.1 1217833 D 402881 CDS YP_001412387.1 154251563 5456731 complement(1218893..1219564) 1 NC_009719.1 KEGG: bra:BRADO6928 conserved hypothetical protein; putative signal peptide; hypothetical protein 1219564 5456731 Plav_1109 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412387.1 1218893 R 402881 CDS YP_001412388.1 154251564 5457014 1219970..1220911 1 NC_009719.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: mes:Meso_0970 RarD protein, DMT superfamily transporter; transporter DMT superfamily protein 1220911 5457014 Plav_1110 Parvibaculum lavamentivorans DS-1 transporter DMT superfamily protein YP_001412388.1 1219970 D 402881 CDS YP_001412389.1 154251565 5455601 complement(1220967..1221515) 1 NC_009719.1 PFAM: conserved hypothetical protein; KEGG: rpe:RPE_2006 conserved hypothetical protein 730; hypothetical protein 1221515 5455601 Plav_1111 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412389.1 1220967 R 402881 CDS YP_001412390.1 154251566 5456517 1221648..1222616 1 NC_009719.1 PFAM: Peptidoglycan-binding LysM; KEGG: mmr:Mmar10_0991 peptidoglycan-binding LysM; peptidoglycan-binding LysM 1222616 5456517 Plav_1112 Parvibaculum lavamentivorans DS-1 peptidoglycan-binding LysM YP_001412390.1 1221648 D 402881 CDS YP_001412391.1 154251567 5455829 1222755..1224695 1 NC_009719.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bpe:BP0899 ABC transporter, ATP-binding protein; ABC transporter-like protein 1224695 5455829 Plav_1113 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001412391.1 1222755 D 402881 CDS YP_001412392.1 154251568 5454662 1224767..1225444 1 NC_009719.1 TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related; KEGG: rsh:Rsph17029_2374 phosphatidylserine decarboxylase related protein; phosphatidylserine decarboxylase 1225444 5454662 Plav_1114 Parvibaculum lavamentivorans DS-1 phosphatidylserine decarboxylase YP_001412392.1 1224767 D 402881 CDS YP_001412393.1 154251569 5455920 1225444..1226358 1 NC_009719.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rpb:RPB_3366 CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase 1226358 5455920 Plav_1115 Parvibaculum lavamentivorans DS-1 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001412393.1 1225444 D 402881 CDS YP_001412394.1 154251570 5453927 complement(1226571..1227878) 1 NC_009719.1 KEGG: mlo:mll3672 methyl transferase-like protein; hypothetical protein 1227878 5453927 Plav_1116 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412394.1 1226571 R 402881 CDS YP_001412395.1 154251571 5455663 1228132..1230429 1 NC_009719.1 KEGG: abo:ABO_1242 hypothetical protein; hypothetical protein 1230429 5455663 Plav_1117 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412395.1 1228132 D 402881 CDS YP_001412396.1 154251572 5453346 1230594..1232003 1 NC_009719.1 KEGG: bba:Bd3071 regulatory protein; hypothetical protein 1232003 5453346 Plav_1118 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412396.1 1230594 D 402881 CDS YP_001412397.1 154251573 5455439 complement(1232011..1233519) 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mmr:Mmar10_0950 multi-sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1233519 5455439 Plav_1119 Parvibaculum lavamentivorans DS-1 integral membrane sensor signal transduction histidine kinase YP_001412397.1 1232011 R 402881 CDS YP_001412398.1 154251574 5456072 complement(1233666..1234472) 1 NC_009719.1 TIGRFAM: putative undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; KEGG: azo:azo0712 undecaprenol kinase; putative undecaprenol kinase 1234472 5456072 Plav_1120 Parvibaculum lavamentivorans DS-1 putative undecaprenol kinase YP_001412398.1 1233666 R 402881 CDS YP_001412399.1 154251575 5453392 complement(1234591..1235844) 1 NC_009719.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: noc:Noc_2054 Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase 1235844 5453392 Plav_1121 Parvibaculum lavamentivorans DS-1 Glu/Leu/Phe/Val dehydrogenase YP_001412399.1 1234591 R 402881 CDS YP_001412400.1 154251576 5456092 1236026..1237318 1 NC_009719.1 PFAM: 17 kDa surface antigen; KEGG: rno:681865 hypothetical protein LOC681865; 17 kDa surface antigen 1237318 5456092 Plav_1122 Parvibaculum lavamentivorans DS-1 17 kDa surface antigen YP_001412400.1 1236026 D 402881 CDS YP_001412401.1 154251577 5455065 1237474..1238280 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpb:RPB_2703 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1238280 5455065 Plav_1123 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001412401.1 1237474 D 402881 CDS YP_001412402.1 154251578 5453798 1238298..1240175 1 NC_009719.1 PFAM: Amidohydrolase 3; KEGG: hne:HNE_3278 amidohydrolase family protein; amidohydrolase 3 1240175 5453798 Plav_1124 Parvibaculum lavamentivorans DS-1 amidohydrolase 3 YP_001412402.1 1238298 D 402881 CDS YP_001412403.1 154251579 5455058 1240223..1240825 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: hypothetical protein; TetR family transcriptional regulator 1240825 5455058 Plav_1125 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001412403.1 1240223 D 402881 CDS YP_001412404.1 154251580 5453790 complement(1240832..1241863) 1 NC_009719.1 KEGG: eli:ELI_09820 hypothetical protein; hypothetical protein 1241863 5453790 Plav_1126 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412404.1 1240832 R 402881 CDS YP_001412405.1 154251581 5455211 complement(1241895..1242968) 1 NC_009719.1 KEGG: pau:PA14_37170 hypothetical protein; hypothetical protein 1242968 5455211 Plav_1127 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412405.1 1241895 R 402881 CDS YP_001412406.1 154251582 5453684 1243196..1243612 1 NC_009719.1 KEGG: hne:HNE_1664 hypothetical protein; hypothetical protein 1243612 5453684 Plav_1128 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412406.1 1243196 D 402881 CDS YP_001412407.1 154251583 5454265 1243784..1245475 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: hne:HNE_2024 PHA-synthase 2; poly-beta-hydroxybutyrate polymerase domain-containing protein 1245475 5454265 Plav_1129 Parvibaculum lavamentivorans DS-1 poly-beta-hydroxybutyrate polymerase domain-containing protein YP_001412407.1 1243784 D 402881 CDS YP_001412408.1 154251584 5453778 1245522..1246409 1 NC_009719.1 TIGRFAM: poly(3-hydroxyalkanoate) depolymerase; PFAM: alpha/beta hydrolase fold; KEGG: eli:ELI_07295 poly(3-hydroxyalkanoate) depolymerase; poly(3-hydroxyalkanoate) depolymerase 1246409 5453778 Plav_1130 Parvibaculum lavamentivorans DS-1 poly(3-hydroxyalkanoate) depolymerase YP_001412408.1 1245522 D 402881 CDS YP_001412409.1 154251585 5455287 1246514..1248169 1 NC_009719.1 PFAM: sulfatase; KEGG: sulfatase family protein; sulfatase 1248169 5455287 Plav_1131 Parvibaculum lavamentivorans DS-1 sulfatase YP_001412409.1 1246514 D 402881 CDS YP_001412410.1 154251586 5456491 1248180..1249136 1 NC_009719.1 PFAM: protein of unknown function DUF323; KEGG: mav:MAV_4458 sulfatase-modifying factor 1; hypothetical protein 1249136 5456491 Plav_1132 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412410.1 1248180 D 402881 CDS YP_001412411.1 154251587 5454538 1249185..1250396 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; KEGG: rpa:RPA1490 bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB4; putative signal transduction histidine kinase 1250396 5454538 Plav_1133 Parvibaculum lavamentivorans DS-1 putative signal transduction histidine kinase YP_001412411.1 1249185 D 402881 CDS YP_001412412.1 154251588 5454359 1250393..1251034 1 NC_009719.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: dra:DR0987 DNA-binding response regulator; two component LuxR family transcriptional regulator 1251034 5454359 Plav_1134 Parvibaculum lavamentivorans DS-1 two component LuxR family transcriptional regulator YP_001412412.1 1250393 D 402881 CDS YP_001412413.1 154251589 5455251 1251156..1252499 1 NC_009719.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mva:Mvan_3995 conserved hypothetical protein; FAD dependent oxidoreductase 1252499 5455251 Plav_1135 Parvibaculum lavamentivorans DS-1 FAD dependent oxidoreductase YP_001412413.1 1251156 D 402881 CDS YP_001412414.1 154251590 5455858 1252530..1254023 1 NC_009719.1 PFAM: amidohydrolase 2; KEGG: swi:Swit_1765 amidohydrolase 2; amidohydrolase 2 1254023 5455858 Plav_1136 Parvibaculum lavamentivorans DS-1 amidohydrolase 2 YP_001412414.1 1252530 D 402881 CDS YP_001412415.1 154251591 5453996 1254023..1254784 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mva:Mvan_3997 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1254784 5453996 Plav_1137 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001412415.1 1254023 D 402881 CDS YP_001412416.1 154251592 5454966 1254809..1255213 1 NC_009719.1 PFAM: protein of unknown function DUF1486; Limonene-12-epoxide hydrolase; KEGG: nfa:nfa41920 hypothetical protein; limonene-12-epoxide hydrolase 1255213 5454966 Plav_1138 Parvibaculum lavamentivorans DS-1 limonene-12-epoxide hydrolase YP_001412416.1 1254809 D 402881 CDS YP_001412417.1 154251593 5454559 1255299..1257473 1 NC_009719.1 PFAM: phospholipase D/Transphosphatidylase; SNARE associated Golgi protein; KEGG: noc:Noc_1912 phospholipase D/transphosphatidylase; hypothetical protein 1257473 5454559 Plav_1139 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412417.1 1255299 D 402881 CDS YP_001412418.1 154251594 5454165 1257470..1258165 1 NC_009719.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mes:Meso_4026 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 1258165 5454165 Plav_1140 Parvibaculum lavamentivorans DS-1 endonuclease/exonuclease/phosphatase YP_001412418.1 1257470 D 402881 CDS YP_001412419.1 154251595 5455346 complement(1258162..1259034) 1 NC_009719.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: psa:PST_0061 probable hydratase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1259034 5455346 Plav_1141 Parvibaculum lavamentivorans DS-1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001412419.1 1258162 R 402881 CDS YP_001412420.1 154251596 5455156 1259249..1260259 1 NC_009719.1 catalyzes the formation of putrescine from carbamoyl-putrescine during agmatine degradation; putrescine carbamoyltransferase 1260259 5455156 Plav_1142 Parvibaculum lavamentivorans DS-1 putrescine carbamoyltransferase YP_001412420.1 1259249 D 402881 CDS YP_001412421.1 154251597 5456283 1260326..1261720 1 NC_009719.1 PFAM: amino acid permease-associated region; KEGG: ppr:PBPRB1917 hypothetical amino acid permease; amino acid permease-associated protein 1261720 5456283 Plav_1143 Parvibaculum lavamentivorans DS-1 amino acid permease-associated protein YP_001412421.1 1260326 D 402881 CDS YP_001412422.1 154251598 5455392 1261743..1262852 1 NC_009719.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: lmf:LMOf2365_0047 peptidyl-arginine deiminase-like protein; agmatine deiminase 1262852 5455392 Plav_1144 Parvibaculum lavamentivorans DS-1 agmatine deiminase YP_001412422.1 1261743 D 402881 CDS YP_001412423.1 154251599 5455355 1262857..1263759 1 NC_009719.1 reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 1263759 5455355 Plav_1145 Parvibaculum lavamentivorans DS-1 carbamate kinase YP_001412423.1 1262857 D 402881 CDS YP_001412424.1 154251600 5455987 1263901..1264740 1 NC_009719.1 TIGRFAM: TonB family protein; KEGG: bbt:BBta_2230 energy transducer; TonB family protein 1264740 5455987 Plav_1146 Parvibaculum lavamentivorans DS-1 TonB family protein YP_001412424.1 1263901 D 402881 CDS YP_001412425.1 154251601 5455310 1264872..1265966 1 NC_009719.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: hne:HNE_1415 NADP-dependent oxidoreductase, L4BD family; alcohol dehydrogenase 1265966 5455310 Plav_1147 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001412425.1 1264872 D 402881 CDS YP_001412426.1 154251602 5455429 1266054..1268819 1 NC_009719.1 PFAM: regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mpt:Mpe_A0892 ATP-dependent transcriptional regulator-like protein protein; regulatory protein LuxR 1268819 5455429 Plav_1148 Parvibaculum lavamentivorans DS-1 regulatory protein LuxR YP_001412426.1 1266054 D 402881 CDS YP_001412427.1 154251603 5453998 1268936..1270819 1 NC_009719.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: bur:Bcep18194_B1204 hydantoinase/oxoprolinase; hydantoinase/oxoprolinase 1270819 5453998 Plav_1149 Parvibaculum lavamentivorans DS-1 hydantoinase/oxoprolinase YP_001412427.1 1268936 D 402881 CDS YP_001412428.1 154251604 5454388 1270831..1271232 1 NC_009719.1 PFAM: Acetone carboxylase gamma subunit; KEGG: bur:Bcep18194_B1205 acetone carboxylase gamma subunit-like; acetone carboxylase subunit gamma 1271232 5454388 Plav_1150 Parvibaculum lavamentivorans DS-1 acetone carboxylase subunit gamma YP_001412428.1 1270831 D 402881 CDS YP_001412429.1 154251605 5455280 1271253..1273385 1 NC_009719.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: pna:Pnap_1163 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase 1273385 5455280 Plav_1151 Parvibaculum lavamentivorans DS-1 5-oxoprolinase YP_001412429.1 1271253 D 402881 CDS YP_001412430.1 154251606 5455638 1273659..1275902 1 NC_009719.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: pna:Pnap_1162 hydantoinase B/oxoprolinase; hydantoinase B/oxoprolinase 1275902 5455638 Plav_1152 Parvibaculum lavamentivorans DS-1 hydantoinase B/oxoprolinase YP_001412430.1 1273659 D 402881 CDS YP_001412431.1 154251607 5455360 1275907..1276671 1 NC_009719.1 KEGG: bur:Bcep18194_B1208 hypothetical protein; hypothetical protein 1276671 5455360 Plav_1153 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412431.1 1275907 D 402881 CDS YP_001412432.1 154251608 5455001 complement(1277249..1279249) 1 NC_009719.1 AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase; acetoacetyl-CoA synthetase 1279249 5455001 Plav_1154 Parvibaculum lavamentivorans DS-1 acetoacetyl-CoA synthetase YP_001412432.1 1277249 R 402881 CDS YP_001412433.1 154251609 5453760 1279719..1282211 1 NC_009719.1 KEGG: mpt:Mpe_A0397 exporters of the RND superfamily; RND efflux transporter 1282211 5453760 Plav_1155 Parvibaculum lavamentivorans DS-1 RND efflux transporter YP_001412433.1 1279719 D 402881 CDS YP_001412434.1 154251610 5453628 1282250..1283629 1 NC_009719.1 KEGG: mpt:Mpe_A0398 hypothetical protein; hypothetical protein 1283629 5453628 Plav_1156 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412434.1 1282250 D 402881 CDS YP_001412435.1 154251611 5455254 1283690..1284634 1 NC_009719.1 KEGG: mpt:Mpe_B0584 hypothetical protein; hypothetical protein 1284634 5455254 Plav_1157 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412435.1 1283690 D 402881 CDS YP_001412436.1 154251612 5455087 1284696..1286474 1 NC_009719.1 KEGG: mpt:Mpe_A0888 hypothetical protein; hypothetical protein 1286474 5455087 Plav_1158 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412436.1 1284696 D 402881 CDS YP_001412437.1 154251613 5455054 1286630..1288006 1 NC_009719.1 KEGG: mpt:Mpe_A0889 hypothetical protein; hypothetical protein 1288006 5455054 Plav_1159 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412437.1 1286630 D 402881 CDS YP_001412438.1 154251614 5456865 complement(1288007..1289140) 1 NC_009719.1 PFAM: glucose sorbosone dehydrogenase; KEGG: pmy:Pmen_0465 glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase 1289140 5456865 Plav_1160 Parvibaculum lavamentivorans DS-1 glucose sorbosone dehydrogenase YP_001412438.1 1288007 R 402881 CDS YP_001412439.1 154251615 5455279 1289221..1289652 1 NC_009719.1 KEGG: pha:PSHAa1706 hypothetical protein ; membrane protein; hypothetical protein 1289652 5455279 Plav_1161 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412439.1 1289221 D 402881 CDS YP_001412440.1 154251616 5455007 1289978..1290421 1 NC_009719.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pmy:Pmen_0673 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 1290421 5455007 Plav_1162 Parvibaculum lavamentivorans DS-1 tripartite ATP-independent periplasmic transporter DctQ YP_001412440.1 1289978 D 402881 CDS YP_001412441.1 154251617 5453817 1290418..1291743 1 NC_009719.1 PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pmy:Pmen_0674 TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP C4-dicarboxylate transport system permease DctM 1291743 5453817 Plav_1163 Parvibaculum lavamentivorans DS-1 TRAP C4-dicarboxylate transport system permease DctM YP_001412441.1 1290418 D 402881 CDS YP_001412442.1 154251618 5456621 1291855..1292916 1 NC_009719.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pmy:Pmen_0675 TRAP dicarboxylate transporter-DctP subunit; TRAP C4-dicarboxylate transport system permease subunit DctP 1292916 5456621 Plav_1164 Parvibaculum lavamentivorans DS-1 TRAP C4-dicarboxylate transport system permease subunit DctP YP_001412442.1 1291855 D 402881 CDS YP_001412443.1 154251619 5453917 1293160..1294974 1 NC_009719.1 KEGG: hne:HNE_1286 cyclododecanone monooxygenase; cyclohexanone monooxygenase 1294974 5453917 Plav_1165 Parvibaculum lavamentivorans DS-1 cyclohexanone monooxygenase YP_001412443.1 1293160 D 402881 CDS YP_001412444.1 154251620 5453394 1295411..1296751 1 NC_009719.1 PFAM: Ppx/GppA phosphatase; KEGG: mes:Meso_0471 Ppx/GppA phosphatase; Ppx/GppA phosphatase 1296751 5453394 Plav_1166 Parvibaculum lavamentivorans DS-1 Ppx/GppA phosphatase YP_001412444.1 1295411 D 402881 CDS YP_001412445.1 154251621 5454527 1296763..1297527 1 NC_009719.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: pde:Pden_3990 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ 1297527 5454527 Plav_1167 Parvibaculum lavamentivorans DS-1 ribosomal RNA methyltransferase RrmJ/FtsJ YP_001412445.1 1296763 D 402881 CDS YP_001412446.1 154251622 5454883 1297640..1299100 1 NC_009719.1 TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; KEGG: bra:BRADO3165 inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH) (ImpD); inosine-5'-monophosphate dehydrogenase 1299100 5454883 Plav_1168 Parvibaculum lavamentivorans DS-1 inosine-5'-monophosphate dehydrogenase YP_001412446.1 1297640 D 402881 CDS YP_001412447.1 154251623 5456886 1299129..1300430 1 NC_009719.1 PFAM: Fmu (Sun) domain protein; KEGG: rpd:RPD_2268 Fmu (Sun); Fmu (Sun) domain-containing protein 1300430 5456886 Plav_1169 Parvibaculum lavamentivorans DS-1 Fmu (Sun) domain-containing protein YP_001412447.1 1299129 D 402881 CDS YP_001412448.1 154251624 5453709 1300427..1301014 1 NC_009719.1 KEGG: zmo:ZMO1319 hypothetical protein; hypothetical protein 1301014 5453709 Plav_1170 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412448.1 1300427 D 402881 CDS YP_001412449.1 154251625 5455035 1300992..1302572 1 NC_009719.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1302572 guaA 5455035 guaA Parvibaculum lavamentivorans DS-1 GMP synthase YP_001412449.1 1300992 D 402881 CDS YP_001412450.1 154251626 5453429 1302889..1304145 1 NC_009719.1 PFAM: integrase family protein; KEGG: rpa:RPA2204 integrase; integrase family protein 1304145 5453429 Plav_1172 Parvibaculum lavamentivorans DS-1 integrase family protein YP_001412450.1 1302889 D 402881 CDS YP_001412451.1 154251627 5454483 complement(1304123..1304407) 1 NC_009719.1 PFAM: Prophage CP4-57 regulatory; KEGG: rpa:RPA2205 hypothetical protein; phage transcriptional regulator AlpA 1304407 5454483 Plav_1173 Parvibaculum lavamentivorans DS-1 phage transcriptional regulator AlpA YP_001412451.1 1304123 R 402881 CDS YP_001412452.1 154251628 5454534 complement(1304571..1305293) 1 NC_009719.1 KEGG: dno:DNO_0175 conserved hypothetical protein VrlQ; hypothetical protein 1305293 5454534 Plav_1174 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412452.1 1304571 R 402881 CDS YP_001412453.1 154251629 5456920 complement(1305301..1307337) 1 NC_009719.1 PFAM: PglZ domain protein; KEGG: dno:DNO_0176 conserved hypothetical protein VrlP; alkaline phosphatase domain-containing protein 1307337 5456920 Plav_1175 Parvibaculum lavamentivorans DS-1 alkaline phosphatase domain-containing protein YP_001412453.1 1305301 R 402881 CDS YP_001412454.1 154251630 5453816 complement(1307334..1310159) 1 NC_009719.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: ace:Acel_0816 helicase domain protein; helicase domain-containing protein 1310159 5453816 Plav_1176 Parvibaculum lavamentivorans DS-1 helicase domain-containing protein YP_001412454.1 1307334 R 402881 CDS YP_001412455.1 154251631 5454810 complement(1310163..1312925) 1 NC_009719.1 KEGG: ace:Acel_0814 hypothetical protein; hypothetical protein 1312925 5454810 Plav_1177 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412455.1 1310163 R 402881 CDS YP_001412456.1 154251632 5454399 complement(1312943..1314832) 1 NC_009719.1 KEGG: chu:CHU_1497 conserved hypothetical protein; possible histidine kinase; hypothetical protein 1314832 5454399 Plav_1178 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412456.1 1312943 R 402881 CDS YP_001412457.1 154251633 5454873 complement(1314822..1316684) 1 NC_009719.1 PFAM: AAA-4 family protein; KEGG: mbu:Mbur_0482 divergent AAA ATP; putative transcriptional regulator 1316684 5454873 Plav_1179 Parvibaculum lavamentivorans DS-1 putative transcriptional regulator YP_001412457.1 1314822 R 402881 CDS YP_001412458.1 154251634 5454529 complement(1316689..1320429) 1 NC_009719.1 KEGG: ace:Acel_0812 hypothetical protein; hypothetical protein 1320429 5454529 Plav_1180 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412458.1 1316689 R 402881 CDS YP_001412459.1 154251635 5455176 complement(1320451..1320948) 1 NC_009719.1 KEGG: dno:DNO_0182 conserved hypothetical protein VrlJ; hypothetical protein 1320948 5455176 Plav_1181 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412459.1 1320451 R 402881 CDS YP_001412460.1 154251636 5453926 complement(1320945..1321163) 1 NC_009719.1 TIGRFAM: DNA binding domain, excisionase family; PFAM: Prophage CP4-57 regulatory; KEGG: vei:Veis_2614 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA 1321163 5453926 Plav_1182 Parvibaculum lavamentivorans DS-1 phage transcriptional regulator AlpA YP_001412460.1 1320945 R 402881 CDS YP_001412461.1 154251637 5453928 1321422..1322315 1 NC_009719.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pde:Pden_3205 transcriptional regulator, LysR family; LysR family transcriptional regulator 1322315 5453928 Plav_1183 Parvibaculum lavamentivorans DS-1 LysR family transcriptional regulator YP_001412461.1 1321422 D 402881 CDS YP_001412462.1 154251638 5454870 complement(1322310..1322549) 1 NC_009719.1 KEGG: gbe:GbCGDNIH1_1065 hypothetical protein; hypothetical protein 1322549 5454870 Plav_1184 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412462.1 1322310 R 402881 CDS YP_001412463.1 154251639 5454038 complement(1322551..1323735) 1 NC_009719.1 PFAM: conjugation TrbI family protein; KEGG: mes:Meso_0500 conjugation TrbI-like protein; conjugation TrbI family protein 1323735 5454038 Plav_1185 Parvibaculum lavamentivorans DS-1 conjugation TrbI family protein YP_001412463.1 1322551 R 402881 CDS YP_001412464.1 154251640 5453388 complement(1323732..1324712) 1 NC_009719.1 TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: mes:Meso_0501 conjugal transfer protein TrbG/VirB9/CagX; P-type conjugative transfer protein TrbG 1324712 5453388 Plav_1186 Parvibaculum lavamentivorans DS-1 P-type conjugative transfer protein TrbG YP_001412464.1 1323732 R 402881 CDS YP_001412465.1 154251641 5454853 complement(1324709..1325398) 1 NC_009719.1 PFAM: Conjugal transfer protein; KEGG: mes:Meso_0502 conjugal transfer protein; conjugal transfer protein TrbF 1325398 5454853 Plav_1187 Parvibaculum lavamentivorans DS-1 conjugal transfer protein TrbF YP_001412465.1 1324709 R 402881 CDS YP_001412466.1 154251642 5453600 complement(1325395..1326756) 1 NC_009719.1 type IV secretion VirB6 family; conjugal transfer protein TrbL 1326756 5453600 Plav_1188 Parvibaculum lavamentivorans DS-1 conjugal transfer protein TrbL YP_001412466.1 1325395 R 402881 CDS YP_001412467.1 154251643 5453644 complement(1326760..1327044) 1 NC_009719.1 KEGG: mes:Meso_2319 hypothetical protein; hypothetical protein 1327044 5453644 Plav_1189 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412467.1 1326760 R 402881 CDS YP_001412468.1 154251644 5455393 complement(1327055..1327834) 1 NC_009719.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: pde:Pden_1480 conjugal transfer protein TrbJ; conjugal transfer protein TrbJ 1327834 5455393 Plav_1190 Parvibaculum lavamentivorans DS-1 conjugal transfer protein TrbJ YP_001412468.1 1327055 R 402881 CDS YP_001412469.1 154251645 5454074 complement(1327840..1330290) 1 NC_009719.1 type IV secretion system VirB4 family; conjugal transfer ATPase TrbE 1330290 5454074 Plav_1191 Parvibaculum lavamentivorans DS-1 conjugal transfer ATPase TrbE YP_001412469.1 1327840 R 402881 CDS YP_001412470.1 154251646 5454221 complement(1330305..1330586) 1 NC_009719.1 KEGG: mlo:mll9611 conjugal transfer protein trbB; conjugal transfer protein TrbB 1330586 5454221 Plav_1192 Parvibaculum lavamentivorans DS-1 conjugal transfer protein TrbB YP_001412470.1 1330305 R 402881 CDS YP_001412471.1 154251647 5455518 complement(1330586..1330918) 1 NC_009719.1 PFAM: Conjugal transfer protein TrbC; KEGG: pde:Pden_1483 conjugal transfer protein TrbC; conjugal transfer protein TrbC 1330918 5455518 Plav_1193 Parvibaculum lavamentivorans DS-1 conjugal transfer protein TrbC YP_001412471.1 1330586 R 402881 CDS YP_001412472.1 154251648 5456227 complement(1330915..1331898) 1 NC_009719.1 TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: mes:Meso_2324 type II secretion system protein E; P-type conjugative transfer ATPase TrbB 1331898 5456227 Plav_1194 Parvibaculum lavamentivorans DS-1 P-type conjugative transfer ATPase TrbB YP_001412472.1 1330915 R 402881 CDS YP_001412473.1 154251649 5453501 complement(1332067..1332516) 1 NC_009719.1 KEGG: bja:bll0042 hypothetical protein; hypothetical protein 1332516 5453501 Plav_1195 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412473.1 1332067 R 402881 CDS YP_001412474.1 154251650 5454310 complement(1332521..1334512) 1 NC_009719.1 type IV secretion VirD4 coupling protein family; conjugal transfer coupling protein TraG 1334512 5454310 Plav_1196 Parvibaculum lavamentivorans DS-1 conjugal transfer coupling protein TraG YP_001412474.1 1332521 R 402881 CDS YP_001412475.1 154251651 5454253 complement(1334539..1336278) 1 NC_009719.1 KEGG: pde:Pden_1507 hypothetical protein; hypothetical protein 1336278 5454253 Plav_1197 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412475.1 1334539 R 402881 CDS YP_001412476.1 154251652 5453988 complement(1336522..1337301) 1 NC_009719.1 PFAM: Lytic transglycosylase catalytic; KEGG: pde:Pden_3185 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 1337301 5453988 Plav_1198 Parvibaculum lavamentivorans DS-1 lytic transglycosylase catalytic subunit YP_001412476.1 1336522 R 402881 CDS YP_001412477.1 154251653 5453999 complement(1337305..1337724) 1 NC_009719.1 PFAM: protein of unknown function DUF736; KEGG: bbt:BBta_7736 hypothetical protein; hypothetical protein 1337724 5453999 Plav_1199 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412477.1 1337305 R 402881 CDS YP_001412478.1 154251654 5454757 complement(1337721..1338266) 1 NC_009719.1 KEGG: mes:Meso_2333 conjugal transfer protein precursor; conjugal transfer protein 1338266 5454757 Plav_1200 Parvibaculum lavamentivorans DS-1 conjugal transfer protein YP_001412478.1 1337721 R 402881 CDS YP_001412479.1 154251655 5454048 complement(1338263..1338784) 1 NC_009719.1 KEGG: bbt:BBta_7734 hypothetical protein; hypothetical protein 1338784 5454048 Plav_1201 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412479.1 1338263 R 402881 CDS YP_001412480.1 154251656 5454140 complement(1338781..1339032) 1 NC_009719.1 KEGG: bja:bsl0049 hypothetical protein; hypothetical protein 1339032 5454140 Plav_1202 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412480.1 1338781 R 402881 CDS YP_001412481.1 154251657 5455421 complement(1339029..1339682) 1 NC_009719.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mes:Meso_2336 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 1339682 5455421 Plav_1203 Parvibaculum lavamentivorans DS-1 cobyrinic acid ac-diamide synthase YP_001412481.1 1339029 R 402881 CDS YP_001412482.1 154251658 5454410 complement(1339679..1340839) 1 NC_009719.1 KEGG: pde:Pden_1512 replication protein A; replication protein A 1340839 5454410 Plav_1204 Parvibaculum lavamentivorans DS-1 replication protein A YP_001412482.1 1339679 R 402881 CDS YP_001412483.1 154251659 5456304 complement(1340858..1341139) 1 NC_009719.1 KEGG: mes:Meso_3841 putative transcriptional regulator; putative transcriptional regulator 1341139 5456304 Plav_1205 Parvibaculum lavamentivorans DS-1 putative transcriptional regulator YP_001412483.1 1340858 R 402881 CDS YP_001412484.1 154251660 5453767 complement(1341276..1341806) 1 NC_009719.1 KEGG: pde:Pden_3174 hypothetical protein; hypothetical protein 1341806 5453767 Plav_1206 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412484.1 1341276 R 402881 CDS YP_001412485.1 154251661 5454892 complement(1342168..1342428) 1 NC_009719.1 KEGG: mes:Meso_0527 hypothetical protein; hypothetical protein 1342428 5454892 Plav_1208 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412485.1 1342168 R 402881 CDS YP_001412486.1 154251662 5455088 complement(1342525..1342791) 1 NC_009719.1 KEGG: mes:Meso_0528 transcriptional regulator, XRE family; XRE family transcriptional regulator 1342791 5455088 Plav_1209 Parvibaculum lavamentivorans DS-1 XRE family transcriptional regulator YP_001412486.1 1342525 R 402881 CDS YP_001412487.1 154251663 5455513 1342852..1343091 1 NC_009719.1 hypothetical protein 1343091 5455513 Plav_1210 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412487.1 1342852 D 402881 CDS YP_001412488.1 154251664 5454034 complement(1343099..1343461) 1 NC_009719.1 PFAM: protein of unknown function DUF736; KEGG: mlo:mlr9738 hypothetical protein; hypothetical protein 1343461 5454034 Plav_1211 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412488.1 1343099 R 402881 CDS YP_001412489.1 154251665 5453546 complement(1343998..1344438) 1 NC_009719.1 KEGG: nwi:Nwi_2132 hypothetical protein; hypothetical protein 1344438 5453546 Plav_1212 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412489.1 1343998 R 402881 CDS YP_001412490.1 154251666 5456891 complement(1344573..1344740) 1 NC_009719.1 KEGG: mlo:msr9708 hypothetical protein; hypothetical protein 1344740 5456891 Plav_1213 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412490.1 1344573 R 402881 CDS YP_001412491.1 154251667 5453710 complement(1345022..1345444) 1 NC_009719.1 PFAM: PilT protein domain protein; KEGG: rle:pRL120076 putative plasmid stability protein StbB; PilT domain-containing protein 1345444 5453710 Plav_1214 Parvibaculum lavamentivorans DS-1 PilT domain-containing protein YP_001412491.1 1345022 R 402881 CDS YP_001412492.1 154251668 5454437 complement(1345441..1345695) 1 NC_009719.1 KEGG: rle:pRL120075 putative plasmid stability protein StbC; putative plasmid stability protein StbC 1345695 5454437 Plav_1215 Parvibaculum lavamentivorans DS-1 putative plasmid stability protein StbC YP_001412492.1 1345441 R 402881 CDS YP_001412493.1 154251669 5455744 complement(1345782..1346708) 1 NC_009719.1 KEGG: pde:Pden_1531 hypothetical protein; hypothetical protein 1346708 5455744 Plav_1216 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412493.1 1345782 R 402881 CDS YP_001412494.1 154251670 5453838 complement(1347060..1348094) 1 NC_009719.1 KEGG: bbt:BBta_7718 hypothetical protein; hypothetical protein 1348094 5453838 Plav_1217 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412494.1 1347060 R 402881 CDS YP_001412495.1 154251671 5456967 complement(1348094..1352413) 1 NC_009719.1 KEGG: pde:Pden_1533 probable methylase/helicase; putative methylase/helicase 1352413 5456967 Plav_1218 Parvibaculum lavamentivorans DS-1 putative methylase/helicase YP_001412495.1 1348094 R 402881 CDS YP_001412496.1 154251672 5454698 complement(1352572..1352868) 1 NC_009719.1 KEGG: pde:Pden_1539 hypothetical protein; hypothetical protein 1352868 5454698 Plav_1219 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412496.1 1352572 R 402881 CDS YP_001412497.1 154251673 5456029 complement(1352865..1353131) 1 NC_009719.1 KEGG: mes:Meso_3821 hypothetical protein; hypothetical protein 1353131 5456029 Plav_1220 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412497.1 1352865 R 402881 CDS YP_001412498.1 154251674 5454553 complement(1353128..1353544) 1 NC_009719.1 KEGG: pde:Pden_1536 hypothetical protein; hypothetical protein 1353544 5454553 Plav_1221 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412498.1 1353128 R 402881 CDS YP_001412499.1 154251675 5453860 complement(1353675..1355795) 1 NC_009719.1 PFAM: ParB domain protein nuclease; KEGG: pde:Pden_1541 ParB-like partition proteins; nuclease 1355795 5453860 Plav_1222 Parvibaculum lavamentivorans DS-1 nuclease YP_001412499.1 1353675 R 402881 CDS YP_001412500.1 154251676 5457043 complement(1355957..1356919) 1 NC_009719.1 PFAM: domain of unknown function DUF1738; KEGG: bbt:BBta_7394 putative ArdC antirestriction protein; hypothetical protein 1356919 5457043 Plav_1223 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412500.1 1355957 R 402881 CDS YP_001412501.1 154251677 5453844 1357160..1357753 1 NC_009719.1 KEGG: mlo:mll5901 hypothetical protein; hypothetical protein 1357753 5453844 Plav_1224 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412501.1 1357160 D 402881 CDS YP_001412502.1 154251678 5454924 1357746..1358762 1 NC_009719.1 PFAM: Domain of unknown function DUF1814; KEGG: gbe:GbCGDNIH1_1177 hypothetical protein; hypothetical protein 1358762 5454924 Plav_1225 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412502.1 1357746 D 402881 CDS YP_001412503.1 154251679 5454614 1358846..1361620 1 NC_009719.1 KEGG: cps:CPS_2955 hypothetical protein; exonuclease V subunit alpha 1361620 5454614 Plav_1226 Parvibaculum lavamentivorans DS-1 exonuclease V subunit alpha YP_001412503.1 1358846 D 402881 CDS YP_001412504.1 154251680 5454533 1361617..1363533 1 NC_009719.1 hypothetical protein 1363533 5454533 Plav_1227 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412504.1 1361617 D 402881 CDS YP_001412505.1 154251681 5455090 1363780..1364793 1 NC_009719.1 PFAM: PfkB domain protein; KEGG: mag:amb4184 sugar kinase; ribokinase-like domain-containing protein 1364793 5455090 Plav_1228 Parvibaculum lavamentivorans DS-1 ribokinase-like domain-containing protein YP_001412505.1 1363780 D 402881 CDS YP_001412506.1 154251682 5454750 complement(1364794..1365774) 1 NC_009719.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 1365774 5454750 Plav_1229 Parvibaculum lavamentivorans DS-1 pantothenate kinase YP_001412506.1 1364794 R 402881 CDS YP_001412507.1 154251683 5455010 complement(1365774..1366103) 1 NC_009719.1 PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: swi:Swit_2565 phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase 1366103 5455010 Plav_1230 Parvibaculum lavamentivorans DS-1 phosphoribosyl-ATP pyrophosphohydrolase YP_001412507.1 1365774 R 402881 CDS YP_001412508.1 154251684 5454612 complement(1366218..1367309) 1 NC_009719.1 PFAM: pentapeptide repeat protein; KEGG: pentapeptide repeat family protein; pentapeptide repeat-containing protein 1367309 5454612 Plav_1231 Parvibaculum lavamentivorans DS-1 pentapeptide repeat-containing protein YP_001412508.1 1366218 R 402881 CDS YP_001412509.1 154251685 5453493 complement(1367472..1368998) 1 NC_009719.1 PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: bra:BRADO2821 conserved hypothetical protein; putative adenylate cyclase with a CHAD domain; CHAD domain-containing protein 1368998 5453493 Plav_1232 Parvibaculum lavamentivorans DS-1 CHAD domain-containing protein YP_001412509.1 1367472 R 402881 CDS YP_001412510.1 154251686 5454523 complement(1369171..1369932) 1 NC_009719.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: bov:BOV_2005 imidazoleglycerol phosphate synthase, cyclase subunit; Imidazole glycerol phosphate synthase cyclase subunit 1369932 5454523 Plav_1233 Parvibaculum lavamentivorans DS-1 Imidazole glycerol phosphate synthase cyclase subunit YP_001412510.1 1369171 R 402881 CDS YP_001412511.1 154251687 5454832 complement(1369929..1370660) 1 NC_009719.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: sme:SMc02570 probable phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase protein; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 1370660 5454832 Plav_1234 Parvibaculum lavamentivorans DS-1 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_001412511.1 1369929 R 402881 CDS YP_001412512.1 154251688 5453498 complement(1370671..1371321) 1 NC_009719.1 TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; CobB/CobQ domain protein glutamine amidotransferase; KEGG: atc:AGR_C_64 amidotransferase HisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 1371321 5453498 Plav_1235 Parvibaculum lavamentivorans DS-1 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_001412512.1 1370671 R 402881 CDS YP_001412513.1 154251689 5454039 complement(1371326..1371814) 1 NC_009719.1 KEGG: rpc:RPC_0305 hypothetical protein; hypothetical protein 1371814 5454039 Plav_1236 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412513.1 1371326 R 402881 CDS YP_001412514.1 154251690 5453707 complement(1371917..1372528) 1 NC_009719.1 PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: rru:Rru_A3597 imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 1372528 5453707 Plav_1237 Parvibaculum lavamentivorans DS-1 imidazoleglycerol-phosphate dehydratase YP_001412514.1 1371917 R 402881 CDS YP_001412515.1 154251691 5453352 complement(1372816..1373430) 1 NC_009719.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mlo:mlr4322 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1373430 5453352 Plav_1238 Parvibaculum lavamentivorans DS-1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001412515.1 1372816 R 402881 CDS YP_001412516.1 154251692 5455091 1373564..1374112 1 NC_009719.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1374112 5455091 Plav_1239 Parvibaculum lavamentivorans DS-1 ATP-dependent protease peptidase subunit YP_001412516.1 1373564 D 402881 CDS YP_001412517.1 154251693 5455278 1374160..1375467 1 NC_009719.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1375467 hslU 5455278 hslU Parvibaculum lavamentivorans DS-1 ATP-dependent protease ATP-binding subunit HslU YP_001412517.1 1374160 D 402881 CDS YP_001412518.1 154251694 5455964 complement(1375508..1376590) 1 NC_009719.1 KEGG: ret:RHE_PE00123 putative ABC transporter, substrate-binding protein; putative ABC transporter substrate-binding protein 1376590 5455964 Plav_1241 Parvibaculum lavamentivorans DS-1 putative ABC transporter substrate-binding protein YP_001412518.1 1375508 R 402881 CDS YP_001412519.1 154251695 5454560 complement(1376663..1377721) 1 NC_009719.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: bxe:Bxe_B1380 2OG-Fe(II) oxygenase superfamily; 2OG-Fe(II) oxygenase 1377721 5454560 Plav_1242 Parvibaculum lavamentivorans DS-1 2OG-Fe(II) oxygenase YP_001412519.1 1376663 R 402881 CDS YP_001412520.1 154251696 5454756 complement(1377718..1378551) 1 NC_009719.1 KEGG: psa:PST_1996 hypothetical protein; hypothetical protein 1378551 5454756 Plav_1243 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412520.1 1377718 R 402881 CDS YP_001412521.1 154251697 5454524 complement(1378640..1379590) 1 NC_009719.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: nar:Saro_0599 transcriptional regulator, LysR family; LysR family transcriptional regulator 1379590 5454524 Plav_1244 Parvibaculum lavamentivorans DS-1 LysR family transcriptional regulator YP_001412521.1 1378640 R 402881 CDS YP_001412522.1 154251698 5454302 complement(1379785..1380168) 1 NC_009719.1 PFAM: helix-turn-helix domain protein; KEGG: bmb:BruAb1_2052 hypothetical protein; XRE family transcriptional regulator 1380168 5454302 Plav_1245 Parvibaculum lavamentivorans DS-1 XRE family transcriptional regulator YP_001412522.1 1379785 R 402881 CDS YP_001412523.1 154251699 5455061 complement(1380165..1380806) 1 NC_009719.1 PFAM: Smr protein/MutS2; KEGG: bja:blr0644 hypothetical protein; Smr protein/MutS2 1380806 5455061 Plav_1246 Parvibaculum lavamentivorans DS-1 Smr protein/MutS2 YP_001412523.1 1380165 R 402881 CDS YP_001412524.1 154251700 5455750 complement(1380838..1381902) 1 NC_009719.1 PFAM: MltA domain protein; 3D domain protein; KEGG: rsp:RSP_1240 putative membrane-bound lytic murein transglycosylase A transmembrane protein; MltA domain-containing protein 1381902 5455750 Plav_1247 Parvibaculum lavamentivorans DS-1 MltA domain-containing protein YP_001412524.1 1380838 R 402881 CDS YP_001412525.1 154251701 5455163 complement(1381990..1382733) 1 NC_009719.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: nha:Nham_0117 import inner membrane translocase, subunit Tim44; import inner membrane translocase subunit Tim44 1382733 5455163 Plav_1248 Parvibaculum lavamentivorans DS-1 import inner membrane translocase subunit Tim44 YP_001412525.1 1381990 R 402881 CDS YP_001412526.1 154251702 5456040 1382928..1383518 1 NC_009719.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: rru:Rru_A3609 FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein 1383518 5456040 Plav_1249 Parvibaculum lavamentivorans DS-1 FxsA cytoplasmic membrane protein YP_001412526.1 1382928 D 402881 CDS YP_001412527.1 154251703 5454759 1383608..1384114 1 NC_009719.1 TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; KEGG: rpa:RPA0302 putative protein-export protein SecB; protein-export protein SecB 1384114 5454759 Plav_1250 Parvibaculum lavamentivorans DS-1 protein-export protein SecB YP_001412527.1 1383608 D 402881 CDS YP_001412528.1 154251704 5453745 complement(1384119..1384805) 1 NC_009719.1 KEGG: rsq:Rsph17025_2673 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 1384805 5453745 Plav_1251 Parvibaculum lavamentivorans DS-1 DNA polymerase III subunit epsilon YP_001412528.1 1384119 R 402881 CDS YP_001412529.1 154251705 5456018 complement(1384822..1385250) 1 NC_009719.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mva:Mvan_2052 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1385250 5456018 Plav_1252 Parvibaculum lavamentivorans DS-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001412529.1 1384822 R 402881 CDS YP_001412530.1 154251706 5456518 complement(1385268..1385894) 1 NC_009719.1 TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; KEGG: dephospho-CoA kinase; dephospho-CoA kinase 1385894 5456518 Plav_1253 Parvibaculum lavamentivorans DS-1 dephospho-CoA kinase YP_001412530.1 1385268 R 402881 CDS YP_001412531.1 154251707 5455188 complement(1385906..1386742) 1 NC_009719.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: mag:amb4547 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 1386742 5455188 Plav_1254 Parvibaculum lavamentivorans DS-1 shikimate 5-dehydrogenase YP_001412531.1 1385906 R 402881 CDS YP_001412532.1 154251708 5456461 complement(1386739..1387377) 1 NC_009719.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: sme:SMc02792 conserved hypothetical protein; maf protein 1387377 5456461 Plav_1255 Parvibaculum lavamentivorans DS-1 maf protein YP_001412532.1 1386739 R 402881 CDS YP_001412533.1 154251709 5455706 complement(1387355..1388179) 1 NC_009719.1 PFAM: protein of unknown function DUF299; KEGG: hypothetical protein; K09773 hypothetical protein; hypothetical protein 1388179 5455706 Plav_1256 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412533.1 1387355 R 402881 CDS YP_001412534.1 154251710 5455775 1388750..1389817 1 NC_009719.1 TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); KEGG: rru:Rru_A3616 uroporphyrinogen decarboxylase HemE; uroporphyrinogen decarboxylase 1389817 5455775 Plav_1257 Parvibaculum lavamentivorans DS-1 uroporphyrinogen decarboxylase YP_001412534.1 1388750 D 402881 CDS YP_001412535.1 154251711 5453461 1389805..1390851 1 NC_009719.1 PFAM: ferrochelatase; KEGG: mag:amb4551 protoheme ferro-lyase; ferrochelatase 1390851 5453461 Plav_1258 Parvibaculum lavamentivorans DS-1 ferrochelatase YP_001412535.1 1389805 D 402881 CDS YP_001412536.1 154251712 5454586 1390870..1391316 1 NC_009719.1 PFAM: conserved hypothetical protein; KEGG: bja:bll0636 hypothetical protein; hypothetical protein 1391316 5454586 Plav_1259 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412536.1 1390870 D 402881 CDS YP_001412537.1 154251713 5454245 1391664..1392932 1 NC_009719.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 1392932 rho 5454245 rho Parvibaculum lavamentivorans DS-1 transcription termination factor Rho YP_001412537.1 1391664 D 402881 CDS YP_001412538.1 154251714 5454675 1393032..1393703 1 NC_009719.1 PFAM: protein of unknown function DUF1457; hypothetical protein 1393703 5454675 Plav_1261 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412538.1 1393032 D 402881 CDS YP_001412539.1 154251715 5456148 complement(1393778..1394737) 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: psa:PST_2434 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold protein 1394737 5456148 Plav_1262 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001412539.1 1393778 R 402881 CDS YP_001412540.1 154251716 5453452 complement(1394734..1395150) 1 NC_009719.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: hch:HCH_04332 hypothetical protein; glutathione-dependent formaldehyde-activating protein 1395150 5453452 Plav_1263 Parvibaculum lavamentivorans DS-1 glutathione-dependent formaldehyde-activating protein YP_001412540.1 1394734 R 402881 CDS YP_001412541.1 154251717 5455171 complement(1395147..1396130) 1 NC_009719.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bja:bll6137 quinone oxidoreductase; alcohol dehydrogenase 1396130 5455171 Plav_1264 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001412541.1 1395147 R 402881 CDS YP_001412542.1 154251718 5456834 complement(1396149..1396775) 1 NC_009719.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rpa:RPA1283 homoserine/homoserine lactone/threonine efflux protein; lysine exporter protein LysE/YggA 1396775 5456834 Plav_1265 Parvibaculum lavamentivorans DS-1 lysine exporter protein LysE/YggA YP_001412542.1 1396149 R 402881 CDS YP_001412543.1 154251719 5454027 complement(1396989..1397684) 1 NC_009719.1 PFAM: dienelactone hydrolase; KEGG: carboxymethylenebutenolidase; carboxymethylenebutenolidase 1397684 5454027 Plav_1266 Parvibaculum lavamentivorans DS-1 carboxymethylenebutenolidase YP_001412543.1 1396989 R 402881 CDS YP_001412544.1 154251720 5454666 complement(1397823..1397993) 1 NC_009719.1 hypothetical protein 1397993 5454666 Plav_1267 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412544.1 1397823 R 402881 CDS YP_001412545.1 154251721 5455860 1398181..1399134 1 NC_009719.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bte:BTH_I0383 glycine cleavage system transcriptional activator; LysR family transcriptional regulator 1399134 5455860 Plav_1268 Parvibaculum lavamentivorans DS-1 LysR family transcriptional regulator YP_001412545.1 1398181 D 402881 CDS YP_001412546.1 154251722 5456833 1399171..1399764 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpa:MAP0089 phosphinothricin N-acetyltransferase; N-acetyltransferase GCN5 1399764 5456833 Plav_1269 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001412546.1 1399171 D 402881 CDS YP_001412547.1 154251723 5456726 complement(1399771..1401801) 1 NC_009719.1 PFAM: protein of unknown function DUF255; KEGG: nwi:Nwi_0099 protein of unknown function DUF255; hypothetical protein 1401801 5456726 Plav_1270 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412547.1 1399771 R 402881 CDS YP_001412548.1 154251724 5454788 1401902..1402186 1 NC_009719.1 KEGG: mag:amb4558 hypothetical protein; hypothetical protein 1402186 5454788 Plav_1271 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412548.1 1401902 D 402881 CDS YP_001412549.1 154251725 5454475 1402213..1403529 1 NC_009719.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 1403529 trmE 5454475 trmE Parvibaculum lavamentivorans DS-1 tRNA modification GTPase TrmE YP_001412549.1 1402213 D 402881 CDS YP_001412550.1 154251726 5456332 complement(1403654..1404682) 1 NC_009719.1 KEGG: pna:Pnap_2858 insertion element protein; insertion element protein 1404682 5456332 Plav_1273 Parvibaculum lavamentivorans DS-1 insertion element protein YP_001412550.1 1403654 R 402881 CDS YP_001412551.1 154251727 5455465 1404879..1406735 1 NC_009719.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 1406735 5455465 Plav_1274 Parvibaculum lavamentivorans DS-1 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_001412551.1 1404879 D 402881 CDS YP_001412552.1 154251728 5455861 1406751..1407431 1 NC_009719.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: mag:amb0003 predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division; methyltransferase GidB 1407431 5455861 Plav_1275 Parvibaculum lavamentivorans DS-1 methyltransferase GidB YP_001412552.1 1406751 D 402881 CDS YP_001412553.1 154251729 5456580 1407409..1408362 1 NC_009719.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: nha:Nham_0103 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 1408362 5456580 Plav_1276 Parvibaculum lavamentivorans DS-1 cobyrinic acid ac-diamide synthase YP_001412553.1 1407409 D 402881 CDS YP_001412554.1 154251730 5456273 1408598..1409509 1 NC_009719.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: sil:SPO0004 chromosome partitioning protein ParB; parB-like partition protein 1409509 5456273 Plav_1277 Parvibaculum lavamentivorans DS-1 parB-like partition protein YP_001412554.1 1408598 D 402881 CDS YP_001412555.1 154251731 5456579 complement(1409971..1411014) 1 NC_009719.1 required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 1411014 holA 5456579 holA Parvibaculum lavamentivorans DS-1 DNA polymerase III subunit delta YP_001412555.1 1409971 R 402881 CDS YP_001412556.1 154251732 5456817 complement(1411025..1411561) 1 NC_009719.1 KEGG: sal:Sala_3019 hypothetical protein; hypothetical protein 1411561 5456817 Plav_1279 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412556.1 1411025 R 402881 CDS YP_001412557.1 154251733 5456455 complement(1411554..1414166) 1 NC_009719.1 TIGRFAM: leucyl-tRNA synthetase; KEGG: mlo:mll4077 leucyl-tRNA synthetase; leucyl-tRNA synthetase 1414166 5456455 Plav_1280 Parvibaculum lavamentivorans DS-1 leucyl-tRNA synthetase YP_001412557.1 1411554 R 402881 CDS YP_001412558.1 154251734 5456265 complement(1414265..1414831) 1 NC_009719.1 KEGG: rru:Rru_A3632 hypothetical protein; hypothetical protein 1414831 5456265 Plav_1281 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412558.1 1414265 R 402881 CDS YP_001412559.1 154251735 5456903 1415430..1416563 1 NC_009719.1 KEGG: rru:Rru_A2211 porin, gram-negative type; porin 1416563 5456903 Plav_1282 Parvibaculum lavamentivorans DS-1 porin YP_001412559.1 1415430 D 402881 CDS YP_001412560.1 154251736 5454816 1416697..1417578 1 NC_009719.1 PFAM: sulfotransferase; KEGG: sfr:Sfri_0789 sulfotransferase; sulfotransferase 1417578 5454816 Plav_1283 Parvibaculum lavamentivorans DS-1 sulfotransferase YP_001412560.1 1416697 D 402881 CDS YP_001412561.1 154251737 5454786 complement(1417559..1418167) 1 NC_009719.1 PFAM: thiamine monophosphate synthase; KEGG: hypothetical protein; thiamine monophosphate synthase 1418167 5454786 Plav_1284 Parvibaculum lavamentivorans DS-1 thiamine monophosphate synthase YP_001412561.1 1417559 R 402881 CDS YP_001412562.1 154251738 5455970 1418249..1418941 1 NC_009719.1 PFAM: alanine racemase domain protein; KEGG: rpa:RPA0285 protein of unknown function UPF0001; alanine racemase domain-containing protein 1418941 5455970 Plav_1285 Parvibaculum lavamentivorans DS-1 alanine racemase domain-containing protein YP_001412562.1 1418249 D 402881 CDS YP_001412563.1 154251739 5453842 complement(1418938..1419498) 1 NC_009719.1 KEGG: mmr:Mmar10_2951 hypothetical protein; hypothetical protein 1419498 5453842 Plav_1286 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412563.1 1418938 R 402881 CDS YP_001412564.1 154251740 5455112 complement(1419545..1420450) 1 NC_009719.1 KEGG: mag:amb0021 hypothetical protein; hypothetical protein 1420450 5455112 Plav_1287 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412564.1 1419545 R 402881 CDS YP_001412565.1 154251741 5453955 1420508..1422418 1 NC_009719.1 PFAM: sulfotransferase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: swi:Swit_3141 sulfotransferase; sulfotransferase 1422418 5453955 Plav_1288 Parvibaculum lavamentivorans DS-1 sulfotransferase YP_001412565.1 1420508 D 402881 CDS YP_001412566.1 154251742 5453556 1422390..1423112 1 NC_009719.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mlo:mlr4237 two-component response regulator; two component transcriptional regulator 1423112 5453556 Plav_1289 Parvibaculum lavamentivorans DS-1 two component transcriptional regulator YP_001412566.1 1422390 D 402881 CDS YP_001412567.1 154251743 5454116 complement(1423113..1423583) 1 NC_009719.1 KEGG: pmy:Pmen_2729 thioesterase superfamily protein; thioesterase superfamily protein 1423583 5454116 Plav_1290 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001412567.1 1423113 R 402881 CDS YP_001412568.1 154251744 5455474 1423692..1424186 1 NC_009719.1 PFAM: cyclic nucleotide-binding; KEGG: mlo:mlr3256 hypothetical protein; cyclic nucleotide-binding protein 1424186 5455474 Plav_1291 Parvibaculum lavamentivorans DS-1 cyclic nucleotide-binding protein YP_001412568.1 1423692 D 402881 CDS YP_001412569.1 154251745 5454499 1424179..1424658 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: sen:SACE_1886 phenylacetic acid degradation-related protein; thioesterase superfamily protein 1424658 5454499 Plav_1292 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001412569.1 1424179 D 402881 CDS YP_001412570.1 154251746 5455183 complement(1424649..1425290) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: cvi:CV2384 probable transcriptional regulator, TetR family; TetR family transcriptional regulator 1425290 5455183 Plav_1293 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001412570.1 1424649 R 402881 CDS YP_001412571.1 154251747 5454849 complement(1425526..1426332) 1 NC_009719.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bmb:BruAb1_1979 Xth-2, exodeoxyribonuclease III; exodeoxyribonuclease III Xth 1426332 5454849 Plav_1294 Parvibaculum lavamentivorans DS-1 exodeoxyribonuclease III Xth YP_001412571.1 1425526 R 402881 CDS YP_001412572.1 154251748 5453738 complement(1426374..1427012) 1 NC_009719.1 KEGG: mmr:Mmar10_2947 hypothetical protein; hypothetical protein 1427012 5453738 Plav_1295 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412572.1 1426374 R 402881 CDS YP_001412573.1 154251749 5454619 complement(1427424..1428806) 1 NC_009719.1 PFAM: aminotransferase class-III; KEGG: pfl:PFL_5927 hypothetical protein; putative aminotransferase 1428806 5454619 Plav_1296 Parvibaculum lavamentivorans DS-1 putative aminotransferase YP_001412573.1 1427424 R 402881 CDS YP_001412574.1 154251750 5455433 complement(1429017..1430408) 1 NC_009719.1 PFAM: glutamine synthetase catalytic region; KEGG: rru:Rru_A2079 glutamate--ammonia ligase; glutamate--putrescine ligase 1430408 5455433 Plav_1297 Parvibaculum lavamentivorans DS-1 glutamate--putrescine ligase YP_001412574.1 1429017 R 402881 CDS YP_001412575.1 154251751 5454178 complement(1430335..1431228) 1 NC_009719.1 PFAM: peptidase C26; KEGG: bte:BTH_II1945 glutamine amidotransferase, class I; peptidase C26 1431228 5454178 Plav_1298 Parvibaculum lavamentivorans DS-1 peptidase C26 YP_001412575.1 1430335 R 402881 CDS YP_001412576.1 154251752 5455990 complement(1431349..1432080) 1 NC_009719.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: rde:RD1_0032 outer membrane lipoprotein carrier protein, putative; outer membrane lipoprotein carrier protein LolA 1432080 5455990 Plav_1299 Parvibaculum lavamentivorans DS-1 outer membrane lipoprotein carrier protein LolA YP_001412576.1 1431349 R 402881 CDS YP_001412577.1 154251753 5453668 complement(1432166..1434727) 1 NC_009719.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: atc:AGR_C_5003 cell division protein ftsK homolog; cell division protein FtsK 1434727 5453668 Plav_1300 Parvibaculum lavamentivorans DS-1 cell division protein FtsK YP_001412577.1 1432166 R 402881 CDS YP_001412578.1 154251754 5456365 complement(1434853..1436094) 1 NC_009719.1 PFAM: aminotransferase class I and II; KEGG: mag:amb0015 aspartate/tyrosine/aromatic aminotransferase; class I/II aminotransferase 1436094 5456365 Plav_1301 Parvibaculum lavamentivorans DS-1 class I/II aminotransferase YP_001412578.1 1434853 R 402881 CDS YP_001412579.1 154251755 5456101 complement(1436323..1437576) 1 NC_009719.1 PFAM: Rh family protein/ammonium transporter; KEGG: pmy:Pmen_2999 Rh family protein/ammonium transporter; Rh family protein/ammonium transporter 1437576 5456101 Plav_1302 Parvibaculum lavamentivorans DS-1 Rh family protein/ammonium transporter YP_001412579.1 1436323 R 402881 CDS YP_001412580.1 154251756 5455791 complement(1438018..1439361) 1 NC_009719.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: jan:Jann_4057 ammonium transporter; ammonium transporter 1439361 5455791 Plav_1303 Parvibaculum lavamentivorans DS-1 ammonium transporter YP_001412580.1 1438018 R 402881 CDS YP_001412581.1 154251757 5455113 complement(1439426..1439764) 1 NC_009719.1 PFAM: nitrogen regulatory protein P-II; KEGG: sme:SMc03806 probable nitrogen regulatory protein PII 2; nitrogen regulatory protein P-II 1439764 5455113 Plav_1304 Parvibaculum lavamentivorans DS-1 nitrogen regulatory protein P-II YP_001412581.1 1439426 R 402881 CDS YP_001412582.1 154251758 5454400 complement(1440138..1441472) 1 NC_009719.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: nha:Nham_0084 ammonium transporter; ammonium transporter 1441472 5454400 Plav_1305 Parvibaculum lavamentivorans DS-1 ammonium transporter YP_001412582.1 1440138 R 402881 CDS YP_001412583.1 154251759 5454995 1441861..1444077 1 NC_009719.1 PFAM: Pyrrolo-quinoline quinone; KEGG: eli:ELI_14570 alcohol dehydrogenase large subunit; Pyrrolo-quinoline quinone 1444077 5454995 Plav_1306 Parvibaculum lavamentivorans DS-1 Pyrrolo-quinoline quinone YP_001412583.1 1441861 D 402881 CDS YP_001412584.1 154251760 5455460 complement(1444132..1445487) 1 NC_009719.1 PFAM: Amidase; KEGG: rsq:Rsph17025_2898 amidase; amidase 1445487 5455460 Plav_1307 Parvibaculum lavamentivorans DS-1 amidase YP_001412584.1 1444132 R 402881 CDS YP_001412585.1 154251761 5455740 1445583..1446812 1 NC_009719.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: rde:RD1_0036 2-octaprenyl-6-methoxyphenol hydroxylase; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 1446812 5455740 Plav_1308 Parvibaculum lavamentivorans DS-1 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_001412585.1 1445583 D 402881 CDS YP_001412586.1 154251762 5455850 complement(1446809..1447177) 1 NC_009719.1 PFAM: protein of unknown function DUF971; KEGG: acr:Acry_2126 protein of unknown function DUF971; hypothetical protein 1447177 5455850 Plav_1309 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412586.1 1446809 R 402881 CDS YP_001412587.1 154251763 5456090 complement(1447170..1447382) 1 NC_009719.1 PFAM: protein of unknown function DUF343; KEGG: mmr:Mmar10_2939 protein of unknown function DUF343; hypothetical protein 1447382 5456090 Plav_1310 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412587.1 1447170 R 402881 CDS YP_001412588.1 154251764 5454976 complement(1447397..1448080) 1 NC_009719.1 PFAM: peptidase S16 lon domain protein; KEGG: nwi:Nwi_0074 peptidase S16; peptidase S16 lon domain-containing protein 1448080 5454976 Plav_1311 Parvibaculum lavamentivorans DS-1 peptidase S16 lon domain-containing protein YP_001412588.1 1447397 R 402881 CDS YP_001412589.1 154251765 5453983 complement(1448094..1449002) 1 NC_009719.1 TIGRFAM: thioredoxin; PFAM: Tetratricopeptide TPR_2 repeat protein; Thioredoxin domain; SMART: Tetratricopeptide domain protein; KEGG: bja:blr0594 thioredoxin; thioredoxin 1449002 5453983 Plav_1312 Parvibaculum lavamentivorans DS-1 thioredoxin YP_001412589.1 1448094 R 402881 CDS YP_001412590.1 154251766 5456043 1449118..1449597 1 NC_009719.1 hypothetical protein 1449597 5456043 Plav_1313 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412590.1 1449118 D 402881 CDS YP_001412591.1 154251767 5456924 complement(1449594..1450142) 1 NC_009719.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: mmr:Mmar10_2937 YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein 1450142 5456924 Plav_1314 Parvibaculum lavamentivorans DS-1 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_001412591.1 1449594 R 402881 CDS YP_001412592.1 154251768 5455119 1450438..1450935 1 NC_009719.1 PFAM: SEC-C motif domain protein; KEGG: mag:amb0006 hypothetical protein; SecC motif-containing protein 1450935 5455119 Plav_1315 Parvibaculum lavamentivorans DS-1 SecC motif-containing protein YP_001412592.1 1450438 D 402881 CDS YP_001412593.1 154251769 5456215 1451028..1452506 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: hypothetical protein; K06902 MFS transporter, UMF1 family; major facilitator superfamily transporter 1452506 5456215 Plav_1316 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001412593.1 1451028 D 402881 CDS YP_001412594.1 154251770 5455997 1452503..1453927 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: nwi:Nwi_0160 major facilitator superfamily MFS_1; major facilitator superfamily transporter 1453927 5455997 Plav_1317 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001412594.1 1452503 D 402881 CDS YP_001412595.1 154251771 5455216 1454000..1454683 1 NC_009719.1 KEGG: hne:HNE_3487 hypothetical protein; hypothetical protein 1454683 5455216 Plav_1318 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412595.1 1454000 D 402881 CDS YP_001412596.1 154251772 5456027 complement(1454690..1456303) 1 NC_009719.1 TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region; KEGG: bms:BR1816 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1456303 5456027 Plav_1319 Parvibaculum lavamentivorans DS-1 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001412596.1 1454690 R 402881 CDS YP_001412597.1 154251773 5456472 1456489..1456884 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: rpe:RPE_2404 uncharacterized domain 1; thioesterase superfamily protein 1456884 5456472 Plav_1320 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001412597.1 1456489 D 402881 CDS YP_001412598.1 154251774 5454114 complement(1456888..1458777) 1 NC_009719.1 PFAM: Heparinase II/III family protein; KEGG: bja:blr0580 hypothetical protein; heparinase II/III family protein 1458777 5454114 Plav_1321 Parvibaculum lavamentivorans DS-1 heparinase II/III family protein YP_001412598.1 1456888 R 402881 CDS YP_001412599.1 154251775 5456030 complement(1458817..1459479) 1 NC_009719.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: nar:Saro_0104 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 1459479 5456030 Plav_1322 Parvibaculum lavamentivorans DS-1 ribulose-phosphate 3-epimerase YP_001412599.1 1458817 R 402881 CDS YP_001412600.1 154251776 5454392 1459619..1460392 1 NC_009719.1 TIGRFAM: methyltransferase FkbM family; KEGG: nmu:Nmul_A0295 methyltransferase FkbM; FkbM family methyltransferase 1460392 5454392 Plav_1323 Parvibaculum lavamentivorans DS-1 FkbM family methyltransferase YP_001412600.1 1459619 D 402881 CDS YP_001412601.1 154251777 5456673 complement(1460399..1461145) 1 NC_009719.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: lbl:LBL_1095 methylase/methyltransferase; type 11 methyltransferase 1461145 5456673 Plav_1324 Parvibaculum lavamentivorans DS-1 type 11 methyltransferase YP_001412601.1 1460399 R 402881 CDS YP_001412602.1 154251778 5456687 complement(1461382..1462104) 1 NC_009719.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sus:Acid_7491 glycosyl transferase, family 2; type 12 methyltransferase 1462104 5456687 Plav_1325 Parvibaculum lavamentivorans DS-1 type 12 methyltransferase YP_001412602.1 1461382 R 402881 CDS YP_001412603.1 154251779 5456840 complement(1462182..1463504) 1 NC_009719.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: rpc:RPC_0025 Fmu (Sun); sun protein 1463504 5456840 Plav_1326 Parvibaculum lavamentivorans DS-1 sun protein YP_001412603.1 1462182 R 402881 CDS YP_001412604.1 154251780 5455269 complement(1463553..1464416) 1 NC_009719.1 PFAM: peptidase M48 Ste24p; KEGG: rpb:RPB_4635 peptidase M48, Ste24p; peptidase M48 Ste24p 1464416 5455269 Plav_1327 Parvibaculum lavamentivorans DS-1 peptidase M48 Ste24p YP_001412604.1 1463553 R 402881 CDS YP_001412605.1 154251781 5455625 1464527..1464739 1 NC_009719.1 PFAM: protein of unknown function DUF1674; KEGG: mlo:msl4095 hypothetical protein; hypothetical protein 1464739 5455625 Plav_1328 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412605.1 1464527 D 402881 CDS YP_001412606.1 154251782 5455854 1464775..1465509 1 NC_009719.1 PFAM: Extensin family protein; KEGG: pst:PSPTO_1513 hypothetical protein; extensin family protein 1465509 5455854 Plav_1329 Parvibaculum lavamentivorans DS-1 extensin family protein YP_001412606.1 1464775 D 402881 CDS YP_001412607.1 154251783 5456479 1465615..1466094 1 NC_009719.1 PFAM: nuclease (SNase domain protein); KEGG: rpe:RPE_0032 nuclease (SNase domain protein); nuclease 1466094 5456479 Plav_1330 Parvibaculum lavamentivorans DS-1 nuclease YP_001412607.1 1465615 D 402881 CDS YP_001412608.1 154251784 5454434 complement(1466246..1468189) 1 NC_009719.1 TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: rpa:RPA0211 acetyl-CoA synthetase; acetate--CoA ligase 1468189 5454434 Plav_1331 Parvibaculum lavamentivorans DS-1 acetate--CoA ligase YP_001412608.1 1466246 R 402881 CDS YP_001412609.1 154251785 5456034 1468355..1469197 1 NC_009719.1 KEGG: sil:SPOA0441 hypothetical protein; hypothetical protein 1469197 5456034 Plav_1332 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412609.1 1468355 D 402881 CDS YP_001412610.1 154251786 5453408 complement(1469254..1469613) 1 NC_009719.1 KEGG: rru:Rru_A3032 hypothetical protein; hypothetical protein 1469613 5453408 Plav_1333 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412610.1 1469254 R 402881 CDS YP_001412611.1 154251787 5456111 complement(1469903..1471168) 1 NC_009719.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: hne:HNE_0162 CaiB/BaiF CoA-transferase, family III; L-carnitine dehydratase/bile acid-inducible protein F 1471168 5456111 Plav_1334 Parvibaculum lavamentivorans DS-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001412611.1 1469903 R 402881 CDS YP_001412612.1 154251788 5454462 complement(1471203..1471646) 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sco:SCO1988 hypothetical protein; N-acetyltransferase GCN5 1471646 5454462 Plav_1335 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001412612.1 1471203 R 402881 CDS YP_001412613.1 154251789 5455284 complement(1471918..1472208) 1 NC_009719.1 PFAM: protein of unknown function DUF1330; KEGG: bja:blr0490 hypothetical protein; hypothetical protein 1472208 5455284 Plav_1336 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412613.1 1471918 R 402881 CDS YP_001412614.1 154251790 5454777 1472310..1473119 1 NC_009719.1 PFAM: Creatininase; KEGG: mmr:Mmar10_0033 creatininase; creatininase 1473119 5454777 Plav_1337 Parvibaculum lavamentivorans DS-1 creatininase YP_001412614.1 1472310 D 402881 CDS YP_001412615.1 154251791 5455179 1473429..1473803 1 NC_009719.1 TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: pnu:Pnuc_0348 death-on-curing family protein; death-on-curing family protein 1473803 5455179 Plav_1338 Parvibaculum lavamentivorans DS-1 death-on-curing family protein YP_001412615.1 1473429 D 402881 CDS YP_001412616.1 154251792 5456084 complement(1473800..1474105) 1 NC_009719.1 PFAM: MazG nucleotide pyrophosphohydrolase; MazG nucleotide pyrophosphohydrolase 1474105 5456084 Plav_1339 Parvibaculum lavamentivorans DS-1 MazG nucleotide pyrophosphohydrolase YP_001412616.1 1473800 R 402881 CDS YP_001412617.1 154251793 5455105 complement(1474567..1474917) 1 NC_009719.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: ferredoxin, Rieske 2Fe-2S family; Rieske (2Fe-2S) domain-containing protein 1474917 5455105 Plav_1340 Parvibaculum lavamentivorans DS-1 Rieske (2Fe-2S) domain-containing protein YP_001412617.1 1474567 R 402881 CDS YP_001412618.1 154251794 5454044 complement(1474914..1475339) 1 NC_009719.1 PFAM: protein of unknown function DUF55; KEGG: mes:Meso_3206 protein of unknown function DUF55; hypothetical protein 1475339 5454044 Plav_1341 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412618.1 1474914 R 402881 CDS YP_001412619.1 154251795 5455838 complement(1475345..1475629) 1 NC_009719.1 PFAM: YCII-related; KEGG: bov:BOV_1818 hypothetical protein; hypothetical protein 1475629 5455838 Plav_1342 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412619.1 1475345 R 402881 CDS YP_001412620.1 154251796 5456637 complement(1475650..1476651) 1 NC_009719.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Ketopantoate reductase ApbA/PanE domain protein; KEGG: mmr:Mmar10_0038 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 1476651 5456637 Plav_1343 Parvibaculum lavamentivorans DS-1 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) YP_001412620.1 1475650 R 402881 CDS YP_001412621.1 154251797 5454471 1476741..1477367 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: hne:HNE_0134 transcriptional regulator, TetR family; TetR family transcriptional regulator 1477367 5454471 Plav_1344 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001412621.1 1476741 D 402881 CDS YP_001412622.1 154251798 5455262 1477544..1477735 1 NC_009719.1 hypothetical protein 1477735 5455262 Plav_1345 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412622.1 1477544 D 402881 CDS YP_001412623.1 154251799 5456402 1477798..1477923 1 NC_009719.1 hypothetical protein 1477923 5456402 Plav_1346 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412623.1 1477798 D 402881 CDS YP_001412624.1 154251800 5454809 complement(1478072..1478971) 1 NC_009719.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: gbe:GbCGDNIH1_2223 caprolactone hydrolase; alpha/beta hydrolase domain-containing protein 1478971 5454809 Plav_1347 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase domain-containing protein YP_001412624.1 1478072 R 402881 CDS YP_001412625.1 154251801 5456543 complement(1478982..1480073) 1 NC_009719.1 TIGRFAM: putative metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease; KEGG: mmr:Mmar10_0039 putative metalloendopeptidase, glycoprotease family; metalloendopeptidase glycoprotease family 1480073 5456543 Plav_1348 Parvibaculum lavamentivorans DS-1 metalloendopeptidase glycoprotease family YP_001412625.1 1478982 R 402881 CDS YP_001412626.1 154251802 5454296 1480192..1481118 1 NC_009719.1 TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; KEGG: pde:Pden_3630 porphobilinogen deaminase; porphobilinogen deaminase 1481118 5454296 Plav_1349 Parvibaculum lavamentivorans DS-1 porphobilinogen deaminase YP_001412626.1 1480192 D 402881 CDS YP_001412627.1 154251803 5454336 1481124..1481837 1 NC_009719.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: mag:amb4421 uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 1481837 5454336 Plav_1350 Parvibaculum lavamentivorans DS-1 uroporphyrinogen III synthase HEM4 YP_001412627.1 1481124 D 402881 CDS YP_001412628.1 154251804 5456337 1481924..1483219 1 NC_009719.1 KEGG: ret:RHE_CH03906 hypothetical protein; hypothetical protein 1483219 5456337 Plav_1351 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412628.1 1481924 D 402881 CDS YP_001412629.1 154251805 5454468 1483227..1484765 1 NC_009719.1 PFAM: HemY domain protein; KEGG: mes:Meso_3199 HemY-like; HemY domain-containing protein 1484765 5454468 Plav_1352 Parvibaculum lavamentivorans DS-1 HemY domain-containing protein YP_001412629.1 1483227 D 402881 CDS YP_001412630.1 154251806 5455110 1484759..1485778 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: eli:ELI_02370 hydrolase, alpha/beta hydrolase fold family protein; alpha/beta hydrolase fold protein 1485778 5455110 Plav_1353 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001412630.1 1484759 D 402881 CDS YP_001412631.1 154251807 5456361 1486057..1487484 1 NC_009719.1 PFAM: homospermidine synthase; KEGG: mag:amb2266 homospermidine synthase; homospermidine synthase 1487484 5456361 Plav_1354 Parvibaculum lavamentivorans DS-1 homospermidine synthase YP_001412631.1 1486057 D 402881 CDS YP_001412632.1 154251808 5456429 complement(1487609..1487785) 1 NC_009719.1 hypothetical protein 1487785 5456429 Plav_1355 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412632.1 1487609 R 402881 CDS YP_001412633.1 154251809 5455430 1488138..1488479 1 NC_009719.1 PFAM: nitrogen regulatory protein P-II; KEGG: bcn:Bcen_2252 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 1488479 5455430 Plav_1356 Parvibaculum lavamentivorans DS-1 nitrogen regulatory protein P-II YP_001412633.1 1488138 D 402881 CDS YP_001412634.1 154251810 5453750 complement(1488486..1489169) 1 NC_009719.1 KEGG: rpa:RPA1579 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 1489169 5453750 Plav_1357 Parvibaculum lavamentivorans DS-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001412634.1 1488486 R 402881 CDS YP_001412635.1 154251811 5456391 1489424..1490290 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mag:amb0567 signal transduction histidine kinase; histidine kinase 1490290 5456391 Plav_1358 Parvibaculum lavamentivorans DS-1 histidine kinase YP_001412635.1 1489424 D 402881 CDS YP_001412636.1 154251812 5456511 1490287..1491999 1 NC_009719.1 KEGG: rpa:RPA2027 ATPase:protein of unknown function DUF87; hypothetical protein 1491999 5456511 Plav_1359 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412636.1 1490287 D 402881 CDS YP_001412637.1 154251813 5454940 1492110..1492565 1 NC_009719.1 PFAM: protein of unknown function DUF461; KEGG: har:HEAR2923 Conserved hypothetical protein. putative conserved domain; hypothetical protein 1492565 5454940 Plav_1360 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412637.1 1492110 D 402881 CDS YP_001412638.1 154251814 5454506 1492871..1494868 1 NC_009719.1 PFAM: protein of unknown function DUF1302; KEGG: cps:CPS_3432 hypothetical protein; hypothetical protein 1494868 5454506 Plav_1361 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412638.1 1492871 D 402881 CDS YP_001412639.1 154251815 5456014 1494996..1495319 1 NC_009719.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: rpe:RPE_1646 excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C 1495319 5456014 Plav_1362 Parvibaculum lavamentivorans DS-1 excinuclease ABC subunit C YP_001412639.1 1494996 D 402881 CDS YP_001412640.1 154251816 5455264 1495912..1497267 1 NC_009719.1 PFAM: protein of unknown function DUF1329; KEGG: cps:CPS_2805 hypothetical protein; hypothetical protein 1497267 5455264 Plav_1363 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412640.1 1495912 D 402881 CDS YP_001412641.1 154251817 5454454 1497541..1498620 1 NC_009719.1 KEGG: pfl:PFL_3279 BNR/Asp-box repeat protein; BNR/Asp-box repeat-containing protein 1498620 5454454 Plav_1364 Parvibaculum lavamentivorans DS-1 BNR/Asp-box repeat-containing protein YP_001412641.1 1497541 D 402881 CDS YP_001412642.1 154251818 5455317 1498802..1499605 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swi:Swit_1014 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1499605 5455317 Plav_1365 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001412642.1 1498802 D 402881 CDS YP_001412643.1 154251819 5456330 1499611..1500798 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: swi:Swit_1013 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 1500798 5456330 Plav_1366 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001412643.1 1499611 D 402881 CDS YP_001412644.1 154251820 5455896 1500813..1502006 1 NC_009719.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RS05205 probable transmembrane protein; acyl-CoA dehydrogenase type 2 1502006 5455896 Plav_1367 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase type 2 YP_001412644.1 1500813 D 402881 CDS YP_001412645.1 154251821 5456652 1502044..1502829 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase; short chain dehydrogenase 1502829 5456652 Plav_1368 Parvibaculum lavamentivorans DS-1 short chain dehydrogenase YP_001412645.1 1502044 D 402881 CDS YP_001412646.1 154251822 5455933 1502838..1503623 1 NC_009719.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 1503623 5455933 Plav_1369 Parvibaculum lavamentivorans DS-1 glutamine amidotransferase YP_001412646.1 1502838 D 402881 CDS YP_001412647.1 154251823 5455378 1503933..1504235 1 NC_009719.1 PFAM: protein of unknown function YGGT; KEGG: rru:Rru_A3527 protein of unknown function YGGT; hypothetical protein 1504235 5455378 Plav_1370 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412647.1 1503933 D 402881 CDS YP_001412648.1 154251824 5455948 1504244..1504570 1 NC_009719.1 PFAM: protein of unknown function DUF167; KEGG: bbt:BBta_0270 hypothetical protein; hypothetical protein 1504570 5455948 Plav_1371 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412648.1 1504244 D 402881 CDS YP_001412649.1 154251825 5454337 1504722..1505618 1 NC_009719.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: rpb:RPB_0108 methenyltetrahydrofolate cyclohydrolase; methenyltetrahydrofolate cyclohydrolase 1505618 5454337 Plav_1372 Parvibaculum lavamentivorans DS-1 methenyltetrahydrofolate cyclohydrolase YP_001412649.1 1504722 D 402881 CDS YP_001412650.1 154251826 5456823 1505625..1506641 1 NC_009719.1 PFAM: aldo/keto reductase; KEGG: ath:AT4G33670 aldo-keto reductase/ oxidoreductase; aldo/keto reductase 1506641 5456823 Plav_1373 Parvibaculum lavamentivorans DS-1 aldo/keto reductase YP_001412650.1 1505625 D 402881 CDS YP_001412651.1 154251827 5453649 complement(1506663..1506920) 1 NC_009719.1 KEGG: hypothetical protein; K09982 hypothetical protein; hypothetical protein 1506920 5453649 Plav_1374 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412651.1 1506663 R 402881 CDS YP_001412652.1 154251828 5456749 1507120..1508595 1 NC_009719.1 PFAM: beta-lactamase; KEGG: bcz:BCZK2932 penicillin-binding protein; beta-lactamase 1508595 5456749 Plav_1375 Parvibaculum lavamentivorans DS-1 beta-lactamase YP_001412652.1 1507120 D 402881 CDS YP_001412653.1 154251829 5456488 complement(1508603..1509133) 1 NC_009719.1 PFAM: Inorganic pyrophosphatase; KEGG: atu:Atu2661 inorganic pyrophosphatase; inorganic diphosphatase 1509133 5456488 Plav_1376 Parvibaculum lavamentivorans DS-1 inorganic diphosphatase YP_001412653.1 1508603 R 402881 CDS YP_001412654.1 154251830 5455880 complement(1509134..1510366) 1 NC_009719.1 PFAM: argininosuccinate synthase; KEGG: rde:RD1_0417 argininosuccinate synthase; argininosuccinate synthase 1510366 5455880 Plav_1377 Parvibaculum lavamentivorans DS-1 argininosuccinate synthase YP_001412654.1 1509134 R 402881 CDS YP_001412655.1 154251831 5456322 1510548..1511135 1 NC_009719.1 PFAM: DSBA oxidoreductase; KEGG: eba:ebA2541 2-hydroxychromene-2-carboxylate isomerase family protein; DSBA oxidoreductase 1511135 5456322 Plav_1378 Parvibaculum lavamentivorans DS-1 DSBA oxidoreductase YP_001412655.1 1510548 D 402881 CDS YP_001412656.1 154251832 5455672 complement(1511137..1511463) 1 NC_009719.1 KEGG: swi:Swit_3983 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 1511463 5455672 Plav_1379 Parvibaculum lavamentivorans DS-1 antibiotic biosynthesis monooxygenase YP_001412656.1 1511137 R 402881 CDS YP_001412657.1 154251833 5454857 complement(1511501..1512700) 1 NC_009719.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: rpe:RPE_0038 radical SAM enzyme, Cfr family; radical SAM protein 1512700 5454857 Plav_1380 Parvibaculum lavamentivorans DS-1 radical SAM protein YP_001412657.1 1511501 R 402881 CDS YP_001412658.1 154251834 5456775 complement(1512844..1513416) 1 NC_009719.1 KEGG: bov:BOV_0077 hypothetical protein; hypothetical protein 1513416 5456775 Plav_1381 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412658.1 1512844 R 402881 CDS YP_001412659.1 154251835 5456070 1513695..1514699 1 NC_009719.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: reu:Reut_A2099 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase 1514699 5456070 Plav_1382 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001412659.1 1513695 D 402881 CDS YP_001412660.1 154251836 5455296 1514870..1515592 1 NC_009719.1 KEGG: xac:XAC0836 hypothetical protein; hypothetical protein 1515592 5455296 Plav_1383 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412660.1 1514870 D 402881 CDS YP_001412661.1 154251837 5453716 1515673..1516899 1 NC_009719.1 PFAM: beta-lactamase; KEGG: hne:HNE_1031 putative esterase; beta-lactamase 1516899 5453716 Plav_1384 Parvibaculum lavamentivorans DS-1 beta-lactamase YP_001412661.1 1515673 D 402881 CDS YP_001412662.1 154251838 5455845 complement(1516863..1517474) 1 NC_009719.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bja:bll7835 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1517474 5455845 Plav_1385 Parvibaculum lavamentivorans DS-1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001412662.1 1516863 R 402881 CDS YP_001412663.1 154251839 5456838 complement(1517499..1517918) 1 NC_009719.1 PFAM: protein of unknown function DUF1232; KEGG: hne:HNE_3130 hypothetical protein; hypothetical protein 1517918 5456838 Plav_1386 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412663.1 1517499 R 402881 CDS YP_001412664.1 154251840 5455892 1518179..1518961 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hne:HNE_3131 oxidoreductase, short chain dehydrogenase/reductase family protein; short-chain dehydrogenase/reductase SDR 1518961 5455892 Plav_1387 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001412664.1 1518179 D 402881 CDS YP_001412665.1 154251841 5456773 complement(1519038..1519352) 1 NC_009719.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: rpb:RPB_0099 transcriptional coactivator/pterin dehydratase; transcriptional coactivator/pterin dehydratase 1519352 5456773 Plav_1388 Parvibaculum lavamentivorans DS-1 transcriptional coactivator/pterin dehydratase YP_001412665.1 1519038 R 402881 CDS YP_001412666.1 154251842 5456236 1519424..1519831 1 NC_009719.1 PFAM: protein of unknown function DUF1025; KEGG: rpd:RPD_0499 protein of unknown function DUF1025; hypothetical protein 1519831 5456236 Plav_1389 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412666.1 1519424 D 402881 CDS YP_001412667.1 154251843 5456086 complement(1520049..1520600) 1 NC_009719.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: mes:Meso_3349 2'-5' RNA ligase; 2'-5' RNA ligase 1520600 5456086 Plav_1390 Parvibaculum lavamentivorans DS-1 2'-5' RNA ligase YP_001412667.1 1520049 R 402881 CDS YP_001412668.1 154251844 5456760 complement(1520848..1521888) 1 NC_009719.1 PFAM: aldo/keto reductase; KEGG: oxidoreductase, aldo/keto reductase family; aldo/keto reductase 1521888 5456760 Plav_1391 Parvibaculum lavamentivorans DS-1 aldo/keto reductase YP_001412668.1 1520848 R 402881 CDS YP_001412669.1 154251845 5453929 complement(1522101..1522781) 1 NC_009719.1 PFAM: lipolytic protein G-D-S-L family; KEGG: rru:Rru_A3650 lipolytic enzyme, G-D-S-L; GDSL family lipase 1522781 5453929 Plav_1392 Parvibaculum lavamentivorans DS-1 GDSL family lipase YP_001412669.1 1522101 R 402881 CDS YP_001412670.1 154251846 5456347 1522833..1523525 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rru:Rru_A3651 ABC transporter component; ABC transporter-like protein 1523525 5456347 Plav_1393 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001412670.1 1522833 D 402881 CDS YP_001412671.1 154251847 5456791 1523764..1526340 1 NC_009719.1 PFAM: protein of unknown function DUF214; KEGG: rpa:RPA0197 possible ABC transporter permeases; hypothetical protein 1526340 5456791 Plav_1394 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412671.1 1523764 D 402881 CDS YP_001412672.1 154251848 5456857 1526512..1527270 1 NC_009719.1 PFAM: protein of unknown function UPF0005; KEGG: mes:Meso_3353 protein of unknown function UPF0005; hypothetical protein 1527270 5456857 Plav_1395 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412672.1 1526512 D 402881 CDS YP_001412673.1 154251849 5456320 complement(1527328..1527741) 1 NC_009719.1 KEGG: rle:RL4534 hypothetical protein; hypothetical protein 1527741 5456320 Plav_1396 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412673.1 1527328 R 402881 CDS YP_001412674.1 154251850 5456704 1528308..1529279 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psa:PST_2697 probable ATP-binding component of ABC transporter; ABC transporter-like protein 1529279 5456704 Plav_1397 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001412674.1 1528308 D 402881 CDS YP_001412675.1 154251851 5456052 1529276..1530010 1 NC_009719.1 PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: psa:PST_2695 ABC transporter, permease protein; cytochrome c-type biogenesis protein CcmB 1530010 5456052 Plav_1398 Parvibaculum lavamentivorans DS-1 cytochrome c-type biogenesis protein CcmB YP_001412675.1 1529276 D 402881 CDS YP_001412676.1 154251852 5454311 1530014..1531954 1 NC_009719.1 KEGG: pmy:Pmen_3071 ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein; gliding motility ABC transporter auxiliary protein 1531954 5454311 Plav_1399 Parvibaculum lavamentivorans DS-1 gliding motility ABC transporter auxiliary protein YP_001412676.1 1530014 D 402881 CDS YP_001412677.1 154251853 5455921 1531958..1533076 1 NC_009719.1 KEGG: mca:MCA1564 hypothetical protein; hypothetical protein 1533076 5455921 Plav_1400 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412677.1 1531958 D 402881 CDS YP_001412678.1 154251854 5455548 complement(1533080..1533829) 1 NC_009719.1 PFAM: protein of unknown function DUF1223; KEGG: mlo:mlr4337 hypothetical protein; hypothetical protein 1533829 5455548 Plav_1401 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412678.1 1533080 R 402881 CDS YP_001412679.1 154251855 5456250 complement(1533967..1536771) 1 NC_009719.1 TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: sme:SMc03846 probable aconitate hydratase protein; aconitate hydratase 1 1536771 5456250 Plav_1402 Parvibaculum lavamentivorans DS-1 aconitate hydratase 1 YP_001412679.1 1533967 R 402881 CDS YP_001412680.1 154251856 5455942 1537499..1538302 1 NC_009719.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1538302 5455942 Plav_1403 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase YP_001412680.1 1537499 D 402881 CDS YP_001412681.1 154251857 5456130 1538289..1538930 1 NC_009719.1 TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0205 heme exporter protein CcmA; heme exporter protein CcmA 1538930 5456130 Plav_1404 Parvibaculum lavamentivorans DS-1 heme exporter protein CcmA YP_001412681.1 1538289 D 402881 CDS YP_001412682.1 154251858 5455800 1538927..1539604 1 NC_009719.1 TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: pde:Pden_1412 heme exporter protein CcmB; heme exporter protein CcmB 1539604 5455800 Plav_1405 Parvibaculum lavamentivorans DS-1 heme exporter protein CcmB YP_001412682.1 1538927 D 402881 CDS YP_001412683.1 154251859 5455973 1539688..1540455 1 NC_009719.1 TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: bra:BRADO0390 heme ABC transporter (heme exporter protein C), permease protein (cytochrome c biogenesis); heme exporter protein CcmC 1540455 5455973 Plav_1406 Parvibaculum lavamentivorans DS-1 heme exporter protein CcmC YP_001412683.1 1539688 D 402881 CDS YP_001412684.1 154251860 5454261 1540457..1540660 1 NC_009719.1 PFAM: Heme exporter protein D (CcmD); Heme exporter protein CcmD 1540660 5454261 Plav_1407 Parvibaculum lavamentivorans DS-1 Heme exporter protein CcmD YP_001412684.1 1540457 D 402881 CDS YP_001412685.1 154251861 5456458 1540657..1541214 1 NC_009719.1 TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mes:Meso_3362 periplasmic protein thiol--disulphide oxidoreductase DsbE; periplasmic protein thiol--disulfide oxidoreductase DsbE 1541214 5456458 Plav_1408 Parvibaculum lavamentivorans DS-1 periplasmic protein thiol--disulfide oxidoreductase DsbE YP_001412685.1 1540657 D 402881 CDS YP_001412686.1 154251862 5454318 complement(1541236..1541790) 1 NC_009719.1 PFAM: regulatory protein MarR; KEGG: mmr:Mmar10_2856 transcriptional regulator, MarR family; MarR family transcriptional regulator 1541790 5454318 Plav_1409 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001412686.1 1541236 R 402881 CDS YP_001412687.1 154251863 5456946 1542136..1542774 1 NC_009719.1 PFAM: NUDIX hydrolase; KEGG: hne:HNE_3521 hydrolase, NUDIX family, NudH subfamily; NUDIX hydrolase 1542774 5456946 Plav_1410 Parvibaculum lavamentivorans DS-1 NUDIX hydrolase YP_001412687.1 1542136 D 402881 CDS YP_001412688.1 154251864 5453715 1542843..1544492 1 NC_009719.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bbr:BB2073 putative sugar transport protein; general substrate transporter 1544492 5453715 Plav_1411 Parvibaculum lavamentivorans DS-1 general substrate transporter YP_001412688.1 1542843 D 402881 CDS YP_001412689.1 154251865 5453948 complement(1544496..1545131) 1 NC_009719.1 TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; KEGG: bov:BOV_1862 intracellular septation protein A; intracellular septation protein A 1545131 5453948 Plav_1412 Parvibaculum lavamentivorans DS-1 intracellular septation protein A YP_001412689.1 1544496 R 402881 CDS YP_001412690.1 154251866 5454906 complement(1545196..1546146) 1 NC_009719.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; KEGG: mlo:mlr4320 similar to cell division protein FtsY; signal recognition particle-docking protein FtsY 1546146 5454906 Plav_1413 Parvibaculum lavamentivorans DS-1 signal recognition particle-docking protein FtsY YP_001412690.1 1545196 R 402881 CDS YP_001412691.1 154251867 5455326 complement(1546143..1547405) 1 NC_009719.1 KEGG: mlo:mlr4319 hypothetical protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein 1547405 5455326 Plav_1414 Parvibaculum lavamentivorans DS-1 MiaB-like tRNA modifying protein YP_001412691.1 1546143 R 402881 CDS YP_001412692.1 154251868 5457008 complement(1547402..1548283) 1 NC_009719.1 PFAM: diaminopimelate epimerase; KEGG: rpe:RPE_0321 diaminopimelate epimerase; diaminopimelate epimerase 1548283 5457008 Plav_1415 Parvibaculum lavamentivorans DS-1 diaminopimelate epimerase YP_001412692.1 1547402 R 402881 CDS YP_001412693.1 154251869 5454668 1548358..1549188 1 NC_009719.1 PFAM: LmbE family protein; KEGG: mbo:Mb0331c hypothetical protein; LmbE family protein 1549188 5454668 Plav_1416 Parvibaculum lavamentivorans DS-1 LmbE family protein YP_001412693.1 1548358 D 402881 CDS YP_001412694.1 154251870 5455816 1549176..1549655 1 NC_009719.1 PFAM: CinA domain protein; KEGG: hypothetical protein; CinA domain-containing protein 1549655 5455816 Plav_1417 Parvibaculum lavamentivorans DS-1 CinA domain-containing protein YP_001412694.1 1549176 D 402881 CDS YP_001412695.1 154251871 5456995 1549804..1551318 1 NC_009719.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; KEGG: mes:Meso_3341 signal recognition particle protein; signal recognition particle protein 1551318 5456995 Plav_1418 Parvibaculum lavamentivorans DS-1 signal recognition particle protein YP_001412695.1 1549804 D 402881 CDS YP_001412696.1 154251872 5456779 1551399..1551824 1 NC_009719.1 PFAM: ribosomal protein S16; KEGG: sal:Sala_2727 ribosomal protein S16; 30S ribosomal protein S16 1551824 5456779 Plav_1419 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S16 YP_001412696.1 1551399 D 402881 CDS YP_001412697.1 154251873 5456399 1551846..1552412 1 NC_009719.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1552412 rimM 5456399 rimM Parvibaculum lavamentivorans DS-1 16S rRNA-processing protein RimM YP_001412697.1 1551846 D 402881 CDS YP_001412698.1 154251874 5456541 1552409..1553116 1 NC_009719.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; KEGG: mlo:mll4287 tRNA (guanine-N1)-methyltransferase; tRNA (guanine-N1)-methyltransferase 1553116 5456541 Plav_1421 Parvibaculum lavamentivorans DS-1 tRNA (guanine-N1)-methyltransferase YP_001412698.1 1552409 D 402881 CDS YP_001412699.1 154251875 5454537 1553218..1553610 1 NC_009719.1 PFAM: ribosomal protein L19; KEGG: rpd:RPD_0506 ribosomal protein L19; 50S ribosomal protein L19 1553610 5454537 Plav_1422 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L19 YP_001412699.1 1553218 D 402881 CDS YP_001412700.1 154251876 5454674 1553783..1555204 1 NC_009719.1 TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; KEGG: bra:BRADO0374 3-isopropylmalate dehydratase large subunit 2 (isopropylmalate isomerase 2) (alpha-IPM isomerase 2) (IpmI 2); 3-isopropylmalate dehydratase large subunit 1555204 5454674 Plav_1423 Parvibaculum lavamentivorans DS-1 3-isopropylmalate dehydratase large subunit YP_001412700.1 1553783 D 402881 CDS YP_001412701.1 154251877 5453416 1555215..1555820 1 NC_009719.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: jan:Jann_0123 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit 1555820 5453416 Plav_1424 Parvibaculum lavamentivorans DS-1 3-isopropylmalate dehydratase small subunit YP_001412701.1 1555215 D 402881 CDS YP_001412702.1 154251878 5454507 1555843..1556949 1 NC_009719.1 TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: sme:SMc04405 probable 3-isopropylmalate dehydrogenase protein; 3-isopropylmalate dehydrogenase 1556949 5454507 Plav_1425 Parvibaculum lavamentivorans DS-1 3-isopropylmalate dehydrogenase YP_001412702.1 1555843 D 402881 CDS YP_001412703.1 154251879 5456199 1557088..1558167 1 NC_009719.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: bov:BOV_A0831 aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase 1558167 5456199 Plav_1426 Parvibaculum lavamentivorans DS-1 aspartate-semialdehyde dehydrogenase YP_001412703.1 1557088 D 402881 CDS YP_001412704.1 154251880 5455174 1558442..1560595 1 NC_009719.1 TIGRFAM: ammonium transporter; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Rh family protein/ammonium transporter; KEGG: pin:Ping_2650 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); integral membrane sensor signal transduction histidine kinase 1560595 5455174 Plav_1427 Parvibaculum lavamentivorans DS-1 integral membrane sensor signal transduction histidine kinase YP_001412704.1 1558442 D 402881 CDS YP_001412705.1 154251881 5456736 1560682..1561578 1 NC_009719.1 PFAM: HpcH/HpaI aldolase; KEGG: hne:HNE_3534 citrate lyase, beta subunit; citryl-CoA lyase 1561578 5456736 Plav_1428 Parvibaculum lavamentivorans DS-1 citryl-CoA lyase YP_001412705.1 1560682 D 402881 CDS YP_001412706.1 154251882 5456237 1561594..1561761 1 NC_009719.1 hypothetical protein 1561761 5456237 Plav_1429 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412706.1 1561594 D 402881 CDS YP_001412707.1 154251883 5454278 1561758..1562807 1 NC_009719.1 PFAM: MaoC domain protein dehydratase; KEGG: rru:Rru_A1201 MaoC-like dehydratase; dehydratase 1562807 5454278 Plav_1430 Parvibaculum lavamentivorans DS-1 dehydratase YP_001412707.1 1561758 D 402881 CDS YP_001412708.1 154251884 5456211 1562872..1563456 1 NC_009719.1 hypothetical protein 1563456 5456211 Plav_1431 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412708.1 1562872 D 402881 CDS YP_001412709.1 154251885 5454033 complement(1563460..1564101) 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: reh:H16_A1529 phenylacetic acid degradation protein PaaI; thioesterase superfamily protein 1564101 5454033 Plav_1432 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001412709.1 1563460 R 402881 CDS YP_001412710.1 154251886 5453612 1564227..1564634 1 NC_009719.1 TIGRFAM: Succinate dehydrogenase cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: rpe:RPE_0510 succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase cytochrome b556 subunit 1564634 5453612 Plav_1433 Parvibaculum lavamentivorans DS-1 succinate dehydrogenase cytochrome b556 subunit YP_001412710.1 1564227 D 402881 CDS YP_001412711.1 154251887 5456721 1564634..1565059 1 NC_009719.1 TIGRFAM: Succinate dehydrogenase hydrophobic membrane anchor; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: mlo:mll4265 succinate dehydrogenase cytochrome b small subunit; succinate dehydrogenase hydrophobic membrane anchor 1565059 5456721 Plav_1434 Parvibaculum lavamentivorans DS-1 succinate dehydrogenase hydrophobic membrane anchor YP_001412711.1 1564634 D 402881 CDS YP_001412712.1 154251888 5454992 1565088..1566881 1 NC_009719.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 1566881 sdhA 5454992 sdhA Parvibaculum lavamentivorans DS-1 succinate dehydrogenase flavoprotein subunit YP_001412712.1 1565088 D 402881 CDS YP_001412713.1 154251889 5456097 1566904..1567683 1 NC_009719.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; KEGG: mlo:mll4260 succinate dehydrogenase iron-sulfur protein subunit; succinate dehydrogenase and fumarate reductase iron-sulfur protein 1567683 5456097 Plav_1436 Parvibaculum lavamentivorans DS-1 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_001412713.1 1566904 D 402881 CDS YP_001412714.1 154251890 5456357 complement(1567958..1568494) 1 NC_009719.1 hypothetical protein 1568494 5456357 Plav_1437 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412714.1 1567958 R 402881 CDS YP_001412715.1 154251891 5455535 1568581..1568847 1 NC_009719.1 hypothetical protein 1568847 5455535 Plav_1438 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412715.1 1568581 D 402881 CDS YP_001412716.1 154251892 5456554 complement(1569087..1569383) 1 NC_009719.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: syn:sll1783 hypothetical protein; antibiotic biosynthesis monooxygenase 1569383 5456554 Plav_1439 Parvibaculum lavamentivorans DS-1 antibiotic biosynthesis monooxygenase YP_001412716.1 1569087 R 402881 CDS YP_001412717.1 154251893 5454262 complement(1569380..1569757) 1 NC_009719.1 KEGG: bja:bll2395 hypothetical protein; hypothetical protein 1569757 5454262 Plav_1440 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412717.1 1569380 R 402881 CDS YP_001412718.1 154251894 5456451 1570243..1570680 1 NC_009719.1 PFAM: regulatory protein ArsR; KEGG: mmr:Mmar10_1348 putative transcriptional regulator, ArsR family; regulatory protein ArsR 1570680 5456451 Plav_1441 Parvibaculum lavamentivorans DS-1 regulatory protein ArsR YP_001412718.1 1570243 D 402881 CDS YP_001412719.1 154251895 5455336 1570680..1571102 1 NC_009719.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmr:Mmar10_1349 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1571102 5455336 Plav_1442 Parvibaculum lavamentivorans DS-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001412719.1 1570680 D 402881 CDS YP_001412720.1 154251896 5454569 1571130..1571645 1 NC_009719.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mag:amb1828 protein-tyrosine-phosphatase; protein tyrosine phosphatase 1571645 5454569 Plav_1443 Parvibaculum lavamentivorans DS-1 protein tyrosine phosphatase YP_001412720.1 1571130 D 402881 CDS YP_001412721.1 154251897 5456700 1571645..1572718 1 NC_009719.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: pde:Pden_0214 arsenical-resistance protein; arsenical-resistance protein 1572718 5456700 Plav_1444 Parvibaculum lavamentivorans DS-1 arsenical-resistance protein YP_001412721.1 1571645 D 402881 CDS YP_001412722.1 154251898 5454615 complement(1572792..1573100) 1 NC_009719.1 KEGG: pde:Pden_4052 mucin-associated surface protein; hypothetical protein 1573100 5454615 Plav_1445 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412722.1 1572792 R 402881 CDS YP_001412723.1 154251899 5455701 1573410..1574933 1 NC_009719.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: methylmalonate-semialdehyde dehydrogenase, putative; methylmalonate-semialdehyde dehydrogenase 1574933 5455701 Plav_1446 Parvibaculum lavamentivorans DS-1 methylmalonate-semialdehyde dehydrogenase YP_001412723.1 1573410 D 402881 CDS YP_001412724.1 154251900 5453384 1575025..1575861 1 NC_009719.1 PFAM: N-acetyltransferase; KEGG: mlo:mlr4870 arylamine N-acetyltransferase; arylamine N-acetyltransferase 1575861 5453384 Plav_1447 Parvibaculum lavamentivorans DS-1 arylamine N-acetyltransferase YP_001412724.1 1575025 D 402881 CDS YP_001412725.1 154251901 5454608 1575943..1577064 1 NC_009719.1 PFAM: AFG1-family ATPase; KEGG: mmr:Mmar10_2833 AFG1-family ATPase; AFG1 family ATPase 1577064 5454608 Plav_1448 Parvibaculum lavamentivorans DS-1 AFG1 family ATPase YP_001412725.1 1575943 D 402881 CDS YP_001412726.1 154251902 5454907 complement(1577061..1577711) 1 NC_009719.1 hypothetical protein 1577711 5454907 Plav_1449 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412726.1 1577061 R 402881 CDS YP_001412727.1 154251903 5454276 1578008..1579009 1 NC_009719.1 TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase; KEGG: sme:SMc02479 probable malate dehydrogenase protein; NAD-dependent malate dehydrogenase 1579009 5454276 Plav_1450 Parvibaculum lavamentivorans DS-1 NAD-dependent malate dehydrogenase YP_001412727.1 1578008 D 402881 CDS YP_001412728.1 154251904 5456959 1579191..1580336 1 NC_009719.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 1580336 5456959 Plav_1451 Parvibaculum lavamentivorans DS-1 ribonuclease Z YP_001412728.1 1579191 D 402881 CDS YP_001412729.1 154251905 5455669 1580553..1581722 1 NC_009719.1 TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: phosphoribosylglycinamide synthetase; ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; KEGG: mag:amb3958 succinyl-CoA synthetase; succinyl-CoA synthetase subunit beta 1581722 5455669 Plav_1452 Parvibaculum lavamentivorans DS-1 succinyl-CoA synthetase subunit beta YP_001412729.1 1580553 D 402881 CDS YP_001412730.1 154251906 5456021 1581722..1582597 1 NC_009719.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1582597 5456021 Plav_1453 Parvibaculum lavamentivorans DS-1 succinyl-CoA synthetase subunit alpha YP_001412730.1 1581722 D 402881 CDS YP_001412731.1 154251907 5456938 1582787..1586038 1 NC_009719.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1586038 sucA 5456938 sucA Parvibaculum lavamentivorans DS-1 2-oxoglutarate dehydrogenase E1 component YP_001412731.1 1582787 D 402881 CDS YP_001412732.1 154251908 5455593 1586079..1587320 1 NC_009719.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rpa:RPA0188 dihydrolipoamide acetyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 1587320 5455593 Plav_1455 Parvibaculum lavamentivorans DS-1 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_001412732.1 1586079 D 402881 CDS YP_001412733.1 154251909 5456904 1587329..1588720 1 NC_009719.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; KEGG: bja:bll0449 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 1588720 5456904 Plav_1456 Parvibaculum lavamentivorans DS-1 dihydrolipoamide dehydrogenase YP_001412733.1 1587329 D 402881 CDS YP_001412734.1 154251910 5454941 complement(1588778..1589758) 1 NC_009719.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mag:amb4250 integrase; integrase family protein 1589758 5454941 Plav_1457 Parvibaculum lavamentivorans DS-1 integrase family protein YP_001412734.1 1588778 R 402881 CDS YP_001412735.1 154251911 5454373 complement(1589731..1590471) 1 NC_009719.1 PFAM: protein of unknown function DUF484; KEGG: mag:amb4252 hypothetical protein; hypothetical protein 1590471 5454373 Plav_1458 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412735.1 1589731 R 402881 CDS YP_001412736.1 154251912 5453896 complement(1590539..1591195) 1 NC_009719.1 TIGRFAM: putative transaldolase; PFAM: Transaldolase; KEGG: mes:Meso_3212 putative transaldolase; putative transaldolase 1591195 5453896 Plav_1459 Parvibaculum lavamentivorans DS-1 putative transaldolase YP_001412736.1 1590539 R 402881 CDS YP_001412737.1 154251913 5453986 1591395..1593590 1 NC_009719.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 1593590 5453986 Plav_1460 Parvibaculum lavamentivorans DS-1 primosome assembly protein PriA YP_001412737.1 1591395 D 402881 CDS YP_001412738.1 154251914 5454263 1593618..1594535 1 NC_009719.1 hypothetical protein 1594535 5454263 Plav_1461 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412738.1 1593618 D 402881 CDS YP_001412739.1 154251915 5454401 1594786..1595370 1 NC_009719.1 TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: rpd:RPD_0556 ATP synthase F1, delta subunit; ATP synthase F1 subunit delta 1595370 5454401 Plav_1462 Parvibaculum lavamentivorans DS-1 ATP synthase F1 subunit delta YP_001412739.1 1594786 D 402881 CDS YP_001412740.1 154251916 5454975 1595370..1596899 1 NC_009719.1 TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: mes:Meso_3216 ATP synthase F1, alpha subunit; ATP synthase F1 subunit alpha 1596899 5454975 Plav_1463 Parvibaculum lavamentivorans DS-1 ATP synthase F1 subunit alpha YP_001412740.1 1595370 D 402881 CDS YP_001412741.1 154251917 5453812 1596932..1597816 1 NC_009719.1 TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; KEGG: rle:RL4408 putative ATP synthase gamma chain; ATP synthase F1 subunit gamma 1597816 5453812 Plav_1464 Parvibaculum lavamentivorans DS-1 ATP synthase F1 subunit gamma YP_001412741.1 1596932 D 402881 CDS YP_001412742.1 154251918 5454494 1597849..1599285 1 NC_009719.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 1599285 5454494 Plav_1465 Parvibaculum lavamentivorans DS-1 F0F1 ATP synthase subunit beta YP_001412742.1 1597849 D 402881 CDS YP_001412743.1 154251919 5455023 1599322..1599720 1 NC_009719.1 TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: mmr:Mmar10_2800 ATP synthase F1, epsilon subunit; ATP synthase F1 subunit epsilon 1599720 5455023 Plav_1466 Parvibaculum lavamentivorans DS-1 ATP synthase F1 subunit epsilon YP_001412743.1 1599322 D 402881 CDS YP_001412744.1 154251920 5455039 1600042..1600866 1 NC_009719.1 KEGG: gbe:GbCGDNIH1_2053 hypothetical protein; hypothetical protein 1600866 5455039 Plav_1467 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412744.1 1600042 D 402881 CDS YP_001412745.1 154251921 5454156 complement(1600885..1601832) 1 NC_009719.1 KEGG: bov:BOV_1771 hypothetical protein; hypothetical protein 1601832 5454156 Plav_1468 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412745.1 1600885 R 402881 CDS YP_001412746.1 154251922 5456869 1602004..1603059 1 NC_009719.1 KEGG: bra:BRADO6993 methyl-accepting chemotaxis protein (MCP); hypothetical protein 1603059 5456869 Plav_1469 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412746.1 1602004 D 402881 CDS YP_001412747.1 154251923 5453643 complement(1603272..1603799) 1 NC_009719.1 PFAM: NUDIX hydrolase; KEGG: mlo:mll3998 probable (di)nucleoside polyphosphate hydrolase; NUDIX hydrolase 1603799 5453643 Plav_1470 Parvibaculum lavamentivorans DS-1 NUDIX hydrolase YP_001412747.1 1603272 R 402881 CDS YP_001412748.1 154251924 5454249 complement(1603820..1605100) 1 NC_009719.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: nha:Nham_0526 protein of unknown function DUF610, YibQ; hypothetical protein 1605100 5454249 Plav_1471 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412748.1 1603820 R 402881 CDS YP_001412749.1 154251925 5454955 complement(1605135..1606469) 1 NC_009719.1 TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: rpd:RPD_0566 carboxyl-terminal protease; carboxyl-terminal protease 1606469 5454955 Plav_1472 Parvibaculum lavamentivorans DS-1 carboxyl-terminal protease YP_001412749.1 1605135 R 402881 CDS YP_001412750.1 154251926 5453679 complement(1606470..1607810) 1 NC_009719.1 PFAM: peptidase M23B; KEGG: bja:blr0433 hypothetical protein; peptidase M23B 1607810 5453679 Plav_1473 Parvibaculum lavamentivorans DS-1 peptidase M23B YP_001412750.1 1606470 R 402881 CDS YP_001412751.1 154251927 5454638 complement(1607803..1609425) 1 NC_009719.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 1609425 5454638 Plav_1474 Parvibaculum lavamentivorans DS-1 phosphoglyceromutase YP_001412751.1 1607803 R 402881 CDS YP_001412752.1 154251928 5453914 complement(1609501..1609983) 1 NC_009719.1 PFAM: protein of unknown function DUF163; KEGG: sit:TM1040_2505 protein of unknown function DUF163; hypothetical protein 1609983 5453914 Plav_1475 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412752.1 1609501 R 402881 CDS YP_001412753.1 154251929 5454650 complement(1610061..1610567) 1 NC_009719.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: mmr:Mmar10_2793 iojap-like protein; iojap family protein 1610567 5454650 Plav_1476 Parvibaculum lavamentivorans DS-1 iojap family protein YP_001412753.1 1610061 R 402881 CDS YP_001412754.1 154251930 5453821 complement(1610646..1611251) 1 NC_009719.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; KEGG: sil:SPO0449 nicotinic acid mononucleotide adenyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 1611251 5453821 Plav_1477 Parvibaculum lavamentivorans DS-1 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_001412754.1 1610646 R 402881 CDS YP_001412755.1 154251931 5453747 complement(1611262..1612536) 1 NC_009719.1 TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: rpb:RPB_0253 gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase 1612536 5453747 Plav_1478 Parvibaculum lavamentivorans DS-1 gamma-glutamyl phosphate reductase YP_001412755.1 1611262 R 402881 CDS YP_001412756.1 154251932 5454587 complement(1612622..1613779) 1 NC_009719.1 TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: bra:BRADO0431 gamma-glutamate kinase; glutamate 5-kinase 1613779 5454587 Plav_1479 Parvibaculum lavamentivorans DS-1 glutamate 5-kinase YP_001412756.1 1612622 R 402881 CDS YP_001412757.1 154251933 5455257 complement(1613776..1614822) 1 NC_009719.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: mes:Meso_3458 small GTP-binding protein; GTP-binding protein Obg/CgtA 1614822 5455257 Plav_1480 Parvibaculum lavamentivorans DS-1 GTP-binding protein Obg/CgtA YP_001412757.1 1613776 R 402881 CDS YP_001412758.1 154251934 5453467 complement(1614824..1615348) 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: acetyltransferase, GNAT family; N-acetyltransferase GCN5 1615348 5453467 Plav_1481 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001412758.1 1614824 R 402881 CDS YP_001412759.1 154251935 5456349 complement(1615447..1615728) 1 NC_009719.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1615728 rpmA 5456349 rpmA Parvibaculum lavamentivorans DS-1 50S ribosomal protein L27 YP_001412759.1 1615447 R 402881 CDS YP_001412760.1 154251936 5456877 complement(1615750..1616061) 1 NC_009719.1 PFAM: ribosomal protein L21; KEGG: mes:Meso_3461 ribosomal protein L21; 50S ribosomal protein L21 1616061 5456877 Plav_1483 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L21 YP_001412760.1 1615750 R 402881 CDS YP_001412761.1 154251937 5454267 complement(1616203..1616967) 1 NC_009719.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: pae:PA3857 phosphatidylcholine synthase; phosphatidylcholine synthase 1616967 5454267 Plav_1484 Parvibaculum lavamentivorans DS-1 phosphatidylcholine synthase YP_001412761.1 1616203 R 402881 CDS YP_001412762.1 154251938 5453586 1617277..1617741 1 NC_009719.1 KEGG: dps:DP1390 similar to excinuclease ATPase; excinuclease ATPase-like protein 1617741 5453586 Plav_1485 Parvibaculum lavamentivorans DS-1 excinuclease ATPase-like protein YP_001412762.1 1617277 D 402881 CDS YP_001412763.1 154251939 5454631 1617810..1618571 1 NC_009719.1 KEGG: vpa:VP0897 hypothetical protein; hypothetical protein 1618571 5454631 Plav_1486 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412763.1 1617810 D 402881 CDS YP_001412764.1 154251940 5454077 1618558..1619361 1 NC_009719.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: rme:Rmet_4377 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 1619361 5454077 Plav_1487 Parvibaculum lavamentivorans DS-1 phospholipid/glycerol acyltransferase YP_001412764.1 1618558 D 402881 CDS YP_001412765.1 154251941 5456562 1619321..1619599 1 NC_009719.1 KEGG: pen:PSEEN0362 acyl carrier protein; acyl carrier protein 1619599 5456562 Plav_1488 Parvibaculum lavamentivorans DS-1 acyl carrier protein YP_001412765.1 1619321 D 402881 CDS YP_001412766.1 154251942 5456724 1619586..1619837 1 NC_009719.1 PFAM: phosphopantetheine-binding; KEGG: vvy:VV1079 acyl carrier protein; phosphopantetheine-binding protein 1619837 5456724 Plav_1489 Parvibaculum lavamentivorans DS-1 phosphopantetheine-binding protein YP_001412766.1 1619586 D 402881 CDS YP_001412767.1 154251943 5456963 1619812..1620393 1 NC_009719.1 KEGG: pha:PSHAb0395 hypothetical protein; hypothetical protein 1620393 5456963 Plav_1490 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412767.1 1619812 D 402881 CDS YP_001412768.1 154251944 5456573 1620390..1622045 1 NC_009719.1 PFAM: AMP-dependent synthetase and ligase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: bvi:Bcep1808_5958 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1622045 5456573 Plav_1491 Parvibaculum lavamentivorans DS-1 AMP-dependent synthetase and ligase YP_001412768.1 1620390 D 402881 CDS YP_001412769.1 154251945 5455934 1623748..1625334 1 NC_009719.1 PFAM: phenylalanine/histidine ammonia-lyase; KEGG: pen:PSEEN0356 phenylalanine/histidine ammonia-lyase; histidine ammonia-lyase 1625334 5455934 Plav_1493 Parvibaculum lavamentivorans DS-1 histidine ammonia-lyase YP_001412769.1 1623748 D 402881 CDS YP_001412770.1 154251946 5455633 1625331..1625750 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: rme:Rmet_4384 thioesterase superfamily; thioesterase superfamily protein 1625750 5455633 Plav_1494 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001412770.1 1625331 D 402881 CDS YP_001412771.1 154251947 5456025 1625747..1626313 1 NC_009719.1 KEGG: vvy:VV1072 hypothetical protein; hypothetical protein 1626313 5456025 Plav_1495 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412771.1 1625747 D 402881 CDS YP_001412772.1 154251948 5454764 1626310..1628532 1 NC_009719.1 KEGG: bam:Bamb_3607 putative lipoprotein transmembrane; putative lipoprotein transmembrane 1628532 5454764 Plav_1496 Parvibaculum lavamentivorans DS-1 putative lipoprotein transmembrane YP_001412772.1 1626310 D 402881 CDS YP_001412773.1 154251949 5454754 1628522..1629742 1 NC_009719.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: reh:H16_B2509 dehydrogenase (flavoprotein); tryptophan halogenase 1629742 5454754 Plav_1497 Parvibaculum lavamentivorans DS-1 tryptophan halogenase YP_001412773.1 1628522 D 402881 CDS YP_001412774.1 154251950 5455045 1629733..1630305 1 NC_009719.1 KEGG: eca:ECA4495 putative lipoprotein; hypothetical protein 1630305 5455045 Plav_1498 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412774.1 1629733 D 402881 CDS YP_001412775.1 154251951 5453540 1630302..1631474 1 NC_009719.1 PFAM: Beta-ketoacyl synthase; KEGG: bvi:Bcep1808_5964 beta-ketoacyl synthase; beta-ketoacyl synthase 1631474 5453540 Plav_1499 Parvibaculum lavamentivorans DS-1 beta-ketoacyl synthase YP_001412775.1 1630302 D 402881 CDS YP_001412776.1 154251952 5454028 1631474..1631932 1 NC_009719.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: rme:Rmet_4390 hypothetical protein; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 1631932 5454028 Plav_1500 Parvibaculum lavamentivorans DS-1 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_001412776.1 1631474 D 402881 CDS YP_001412777.1 154251953 5455976 1631929..1632666 1 NC_009719.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase, putative; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: vfi:VF0859 3-ketoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 1632666 5455976 Plav_1501 Parvibaculum lavamentivorans DS-1 3-oxoacyl-(acyl-carrier-protein) reductase YP_001412777.1 1631929 D 402881 CDS YP_001412778.1 154251954 5457027 1632666..1633892 1 NC_009719.1 PFAM: Beta-ketoacyl synthase; KEGG: saz:Sama_3394 3-oxoacyl-(acyl-carrier-protein) synthase II; beta-ketoacyl synthase 1633892 5457027 Plav_1502 Parvibaculum lavamentivorans DS-1 beta-ketoacyl synthase YP_001412778.1 1632666 D 402881 CDS YP_001412779.1 154251955 5454243 1634049..1635122 1 NC_009719.1 PFAM: secretion protein HlyD family protein; KEGG: abo:ABO_1849 HlyD family secretion protein, putative; secretion protein HlyD family protein 1635122 5454243 Plav_1503 Parvibaculum lavamentivorans DS-1 secretion protein HlyD family protein YP_001412779.1 1634049 D 402881 CDS YP_001412780.1 154251956 5454509 1635119..1637863 1 NC_009719.1 PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: gsu:GSU2686 ABC transporter, ATP-binding protein; ABC transporter-like protein 1637863 5454509 Plav_1504 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001412780.1 1635119 D 402881 CDS YP_001412781.1 154251957 5454051 1637867..1638988 1 NC_009719.1 PFAM: ABC-2 type transporter; KEGG: abo:ABO_1847 ABC transporter, ATP-binding protein, permease, putative; ABC transporter 1638988 5454051 Plav_1505 Parvibaculum lavamentivorans DS-1 ABC transporter YP_001412781.1 1637867 D 402881 CDS YP_001412782.1 154251958 5454972 complement(1638939..1640033) 1 NC_009719.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: mxa:MXAN_5850 NAD dependent epimerase/dehydratase family protein; 3-beta hydroxysteroid dehydrogenase/isomerase 1640033 5454972 Plav_1506 Parvibaculum lavamentivorans DS-1 3-beta hydroxysteroid dehydrogenase/isomerase YP_001412782.1 1638939 R 402881 CDS YP_001412783.1 154251959 5454041 1640098..1640772 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: gvi:gll0188 TetR family transcriptional regulatory protein; TetR family transcriptional regulator 1640772 5454041 Plav_1507 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001412783.1 1640098 D 402881 CDS YP_001412784.1 154251960 5453652 complement(1640873..1643038) 1 NC_009719.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: aeh:Mlg_1522 catalase/peroxidase HPI; catalase/peroxidase HPI 1643038 5453652 Plav_1508 Parvibaculum lavamentivorans DS-1 catalase/peroxidase HPI YP_001412784.1 1640873 R 402881 CDS YP_001412785.1 154251961 5453826 complement(1643207..1643887) 1 NC_009719.1 KEGG: sil:SPO1996 hypothetical protein; hypothetical protein 1643887 5453826 Plav_1509 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412785.1 1643207 R 402881 CDS YP_001412786.1 154251962 5455181 1644080..1645243 1 NC_009719.1 KEGG: noc:Noc_2091 hypothetical protein; hypothetical protein 1645243 5455181 Plav_1510 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412786.1 1644080 D 402881 CDS YP_001412787.1 154251963 5455466 1645527..1651187 1 NC_009719.1 TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Autotransporter beta- domain protein; KEGG: eci:UTI89_C1627 EntS/YbdA MFS transporter; outer membrane autotransporter 1651187 5455466 Plav_1511 Parvibaculum lavamentivorans DS-1 outer membrane autotransporter YP_001412787.1 1645527 D 402881 CDS YP_001412788.1 154251964 5455974 complement(1651295..1651564) 1 NC_009719.1 hypothetical protein 1651564 5455974 Plav_1512 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412788.1 1651295 R 402881 CDS YP_001412789.1 154251965 5454927 complement(1651561..1652100) 1 NC_009719.1 hypothetical protein 1652100 5454927 Plav_1513 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412789.1 1651561 R 402881 CDS YP_001412790.1 154251966 5456267 complement(1652251..1653072) 1 NC_009719.1 PFAM: band 7 protein; KEGG: mlo:mll1932 probable stomatin; hypothetical protein 1653072 5456267 Plav_1514 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412790.1 1652251 R 402881 CDS YP_001412791.1 154251967 5454660 complement(1653084..1654544) 1 NC_009719.1 PFAM: protein of unknown function DUF107; KEGG: bja:bll4952 NfeD protein homolog; hypothetical protein 1654544 5454660 Plav_1515 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412791.1 1653084 R 402881 CDS YP_001412792.1 154251968 5453833 1654840..1655046 1 NC_009719.1 PFAM: protein of unknown function DUF1458; KEGG: hha:Hhal_0546 protein of unknown function DUF1458; hypothetical protein 1655046 5453833 Plav_1516 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412792.1 1654840 D 402881 CDS YP_001412793.1 154251969 5454102 1655601..1655789 1 NC_009719.1 KEGG: gur:Gura_2403 hypothetical protein; hypothetical protein 1655789 5454102 Plav_1517 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412793.1 1655601 D 402881 CDS YP_001412794.1 154251970 5455144 complement(1655813..1656250) 1 NC_009719.1 KEGG: pfo:Pfl_2133 metal dependent phosphohydrolase, HD region; metal dependent phosphohydrolase, HD region 1656250 5455144 Plav_1518 Parvibaculum lavamentivorans DS-1 metal dependent phosphohydrolase, HD region YP_001412794.1 1655813 R 402881 CDS YP_001412795.1 154251971 5454294 1656382..1657161 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hne:HNE_2812 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 1657161 5454294 Plav_1519 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001412795.1 1656382 D 402881 CDS YP_001412796.1 154251972 5454858 complement(1657493..1658728) 1 NC_009719.1 PFAM: HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rle:RL4264 hypothetical protein; hypothetical protein 1658728 5454858 Plav_1520 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412796.1 1657493 R 402881 CDS YP_001412797.1 154251973 5453415 1658779..1659237 1 NC_009719.1 PFAM: protein of unknown function DUF188; KEGG: rru:Rru_A0086 protein of unknown function DUF188; hypothetical protein 1659237 5453415 Plav_1521 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412797.1 1658779 D 402881 CDS YP_001412798.1 154251974 5455229 complement(1659215..1659718) 1 NC_009719.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: mes:Meso_0379 methionine-R-sulfoxide reductase; methionine-R-sulfoxide reductase 1659718 5455229 Plav_1522 Parvibaculum lavamentivorans DS-1 methionine-R-sulfoxide reductase YP_001412798.1 1659215 R 402881 CDS YP_001412799.1 154251975 5454313 complement(1659722..1660360) 1 NC_009719.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: noc:Noc_1776 protein-methionine-S-oxide reductase; peptide methionine sulfoxide reductase 1660360 5454313 Plav_1523 Parvibaculum lavamentivorans DS-1 peptide methionine sulfoxide reductase YP_001412799.1 1659722 R 402881 CDS YP_001412800.1 154251976 5454603 1660544..1661332 1 NC_009719.1 KEGG: swi:Swit_1797 integral membrane-like protein; hypothetical protein 1661332 5454603 Plav_1524 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412800.1 1660544 D 402881 CDS YP_001412801.1 154251977 5453905 complement(1661329..1661496) 1 NC_009719.1 TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: rpc:RPC_0008 cytochrome oxidase maturation protein, cbb3-type; cbb3-type cytochrome oxidase maturation protein 1661496 5453905 Plav_1525 Parvibaculum lavamentivorans DS-1 cbb3-type cytochrome oxidase maturation protein YP_001412801.1 1661329 R 402881 CDS YP_001412802.1 154251978 5456219 complement(1661493..1663709) 1 NC_009719.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mag:amb4368 cation transport ATPase; heavy metal translocating P-type ATPase 1663709 5456219 Plav_1526 Parvibaculum lavamentivorans DS-1 heavy metal translocating P-type ATPase YP_001412802.1 1661493 R 402881 CDS YP_001412803.1 154251979 5456165 complement(1663718..1664233) 1 NC_009719.1 PFAM: FixH family protein; KEGG: mag:amb4367 predicted integral membrane protein linked to a cation pump; FixH family protein 1664233 5456165 Plav_1527 Parvibaculum lavamentivorans DS-1 FixH family protein YP_001412803.1 1663718 R 402881 CDS YP_001412804.1 154251980 5455826 complement(1664230..1665771) 1 NC_009719.1 TIGRFAM: Cytochrome c oxidase cbb3 type accessory protein FixG; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mmr:Mmar10_1153 4Fe-4S ferredoxin, iron-sulfur binding domain protein; cytochrome c oxidase cbb3 type accessory protein FixG 1665771 5455826 Plav_1528 Parvibaculum lavamentivorans DS-1 cytochrome c oxidase cbb3 type accessory protein FixG YP_001412804.1 1664230 R 402881 CDS YP_001412805.1 154251981 5453862 complement(1665808..1666698) 1 NC_009719.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: rpa:RPA0016 cytochrome-c oxidase fixP chain; cytochrome c oxidase, cbb3-type subunit III 1666698 5453862 Plav_1529 Parvibaculum lavamentivorans DS-1 cytochrome c oxidase, cbb3-type subunit III YP_001412805.1 1665808 R 402881 CDS YP_001412806.1 154251982 5453956 complement(1666695..1666919) 1 NC_009719.1 PFAM: Cbb3-type cytochrome oxidase component; KEGG: mmr:Mmar10_1151 Cbb3-type cytochrome oxidase component; cbb3-type cytochrome oxidase subunit 1666919 5453956 Plav_1530 Parvibaculum lavamentivorans DS-1 cbb3-type cytochrome oxidase subunit YP_001412806.1 1666695 R 402881 CDS YP_001412807.1 154251983 5453535 complement(1666929..1667660) 1 NC_009719.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: sme:SMa1216 FixO1 c-type cytochrome; cytochrome c oxidase, cbb3-type subunit II 1667660 5453535 Plav_1531 Parvibaculum lavamentivorans DS-1 cytochrome c oxidase, cbb3-type subunit II YP_001412807.1 1666929 R 402881 CDS YP_001412808.1 154251984 5454544 complement(1667673..1669364) 1 NC_009719.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; KEGG: bja:blr2763 cytochrome-c oxidase; cytochrome c oxidase, cbb3-type subunit I 1669364 5454544 Plav_1532 Parvibaculum lavamentivorans DS-1 cytochrome c oxidase, cbb3-type subunit I YP_001412808.1 1667673 R 402881 CDS YP_001412809.1 154251985 5456046 1669794..1670231 1 NC_009719.1 hypothetical protein 1670231 5456046 Plav_1533 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412809.1 1669794 D 402881 CDS YP_001412810.1 154251986 5454983 1670398..1672761 1 NC_009719.1 KEGG: azo:azo2253 probable exporter of RND superfamily; RND superfamily exporter 1672761 5454983 Plav_1534 Parvibaculum lavamentivorans DS-1 RND superfamily exporter YP_001412810.1 1670398 D 402881 CDS YP_001412811.1 154251987 5454465 complement(1672877..1675969) 1 NC_009719.1 PFAM: acriflavin resistance protein; KEGG: AcrB/AcrD/AcrF family protein; acriflavin resistance protein 1675969 5454465 Plav_1535 Parvibaculum lavamentivorans DS-1 acriflavin resistance protein YP_001412811.1 1672877 R 402881 CDS YP_001412812.1 154251988 5454080 complement(1675966..1677069) 1 NC_009719.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: efflux system protein, putative; RND family efflux transporter MFP subunit 1677069 5454080 Plav_1536 Parvibaculum lavamentivorans DS-1 RND family efflux transporter MFP subunit YP_001412812.1 1675966 R 402881 CDS YP_001412813.1 154251989 5454343 1677156..1677929 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: aba:Acid345_4024 transcriptional regulator, TetR family; TetR family transcriptional regulator 1677929 5454343 Plav_1537 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001412813.1 1677156 D 402881 CDS YP_001412814.1 154251990 5453701 1678052..1678720 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: swi:Swit_2297 transcriptional regulator, TetR family; TetR family transcriptional regulator 1678720 5453701 Plav_1538 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001412814.1 1678052 D 402881 CDS YP_001412815.1 154251991 5454008 1678737..1679657 1 NC_009719.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bch:Bcen2424_5775 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1679657 5454008 Plav_1539 Parvibaculum lavamentivorans DS-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001412815.1 1678737 D 402881 CDS YP_001412816.1 154251992 5453979 1679681..1680556 1 NC_009719.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bxe:Bxe_C1055 putative fumarylacetoacetate (FAA) hydrolase; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 1680556 5453979 Plav_1540 Parvibaculum lavamentivorans DS-1 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_001412816.1 1679681 D 402881 CDS YP_001412817.1 154251993 5454517 1680587..1682080 1 NC_009719.1 PFAM: monooxygenase FAD-binding; KEGG: nar:Saro_3413 monooxygenase, FAD-binding; FAD-binding monooxygenase 1682080 5454517 Plav_1541 Parvibaculum lavamentivorans DS-1 FAD-binding monooxygenase YP_001412817.1 1680587 D 402881 CDS YP_001412818.1 154251994 5455327 1682263..1683771 1 NC_009719.1 KEGG: rpa:RPA1496 possible monooxygenase; putative monooxygenase 1683771 5455327 Plav_1542 Parvibaculum lavamentivorans DS-1 putative monooxygenase YP_001412818.1 1682263 D 402881 CDS YP_001412819.1 154251995 5454624 1683959..1684666 1 NC_009719.1 KEGG: rpe:RPE_0691 hypothetical protein; hypothetical protein 1684666 5454624 Plav_1543 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412819.1 1683959 D 402881 CDS YP_001412820.1 154251996 5454961 complement(1684831..1686087) 1 NC_009719.1 PFAM: cytochrome P450; KEGG: cytochrome P450 family protein; cytochrome P450 1686087 5454961 Plav_1544 Parvibaculum lavamentivorans DS-1 cytochrome P450 YP_001412820.1 1684831 R 402881 CDS YP_001412821.1 154251997 5455125 1686430..1687602 1 NC_009719.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1687602 5455125 Plav_1545 Parvibaculum lavamentivorans DS-1 acetyl-CoA acetyltransferase YP_001412821.1 1686430 D 402881 CDS YP_001412822.1 154251998 5455996 1687725..1688258 1 NC_009719.1 KEGG: acb:A1S_0088 hypothetical protein; hypothetical protein 1688258 5455996 Plav_1546 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412822.1 1687725 D 402881 CDS YP_001412823.1 154251999 5454588 1688500..1689228 1 NC_009719.1 PFAM: regulatory protein MerR; KEGG: nar:Saro_1479 transcriptional regulator, MerR family; MerR family transcriptional regulator 1689228 5454588 Plav_1547 Parvibaculum lavamentivorans DS-1 MerR family transcriptional regulator YP_001412823.1 1688500 D 402881 CDS YP_001412824.1 154252000 5453641 complement(1689236..1690321) 1 NC_009719.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: spermidine/putrescine ABC transporter, ATP-binding protein; K02052 spermidine/putrescine transport system ATP-binding protein; spermidine/putrescine ABC transporter ATPase 1690321 5453641 Plav_1548 Parvibaculum lavamentivorans DS-1 spermidine/putrescine ABC transporter ATPase YP_001412824.1 1689236 R 402881 CDS YP_001412825.1 154252001 5453342 complement(1690375..1691229) 1 NC_009719.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spermidine/putrescine ABC transporter, permease protein; K02053 spermidine/putrescine transport system permease protein; ornithine carbamoyltransferase 1691229 5453342 Plav_1549 Parvibaculum lavamentivorans DS-1 ornithine carbamoyltransferase YP_001412825.1 1690375 R 402881 CDS YP_001412826.1 154252002 5454032 complement(1691226..1692143) 1 NC_009719.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spermidine/putrescine ABC transporter, permease protein; K02054 spermidine/putrescine transport system permease protein; binding-protein-dependent transport system inner membrane protein 1692143 5454032 Plav_1550 Parvibaculum lavamentivorans DS-1 binding-protein-dependent transport system inner membrane protein YP_001412826.1 1691226 R 402881 CDS YP_001412827.1 154252003 5454836 complement(1692344..1693435) 1 NC_009719.1 PFAM: extracellular solute-binding protein family 1; KEGG: spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein; K02055 spermidine/putrescine transport system substrate-binding protein; extracellular solute-binding protein 1693435 5454836 Plav_1551 Parvibaculum lavamentivorans DS-1 extracellular solute-binding protein YP_001412827.1 1692344 R 402881 CDS YP_001412828.1 154252004 5454128 1693763..1694509 1 NC_009719.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential; methionine aminopeptidase 1694509 5454128 Plav_1552 Parvibaculum lavamentivorans DS-1 methionine aminopeptidase YP_001412828.1 1693763 D 402881 CDS YP_001412829.1 154252005 5456589 1694612..1694965 1 NC_009719.1 PFAM: protein of unknown function DUF559; KEGG: nwi:Nwi_2534 protein of unknown function DUF559; hypothetical protein 1694965 5456589 Plav_1553 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412829.1 1694612 D 402881 CDS YP_001412830.1 154252006 5453890 complement(1695187..1695381) 1 NC_009719.1 KEGG: gsu:GSU2438 prevent-host-death family protein; prevent-host-death family protein 1695381 5453890 Plav_1554 Parvibaculum lavamentivorans DS-1 prevent-host-death family protein YP_001412830.1 1695187 R 402881 CDS YP_001412831.1 154252007 5455589 1695624..1695902 1 NC_009719.1 KEGG: vvy:VV2913 predicted membrane protein; membrane protein 1695902 5455589 Plav_1555 Parvibaculum lavamentivorans DS-1 membrane protein YP_001412831.1 1695624 D 402881 CDS YP_001412832.1 154252008 5456998 complement(1695906..1696526) 1 NC_009719.1 PFAM: NUDIX hydrolase; KEGG: rpb:RPB_4339 NUDIX hydrolase; NUDIX hydrolase 1696526 5456998 Plav_1556 Parvibaculum lavamentivorans DS-1 NUDIX hydrolase YP_001412832.1 1695906 R 402881 CDS YP_001412833.1 154252009 5454495 1696803..1697921 1 NC_009719.1 TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; KEGG: lpp:lpp0986 alanine dehydrogenase; alanine dehydrogenase 1697921 5454495 Plav_1557 Parvibaculum lavamentivorans DS-1 alanine dehydrogenase YP_001412833.1 1696803 D 402881 CDS YP_001412834.1 154252010 5456144 1698063..1698656 1 NC_009719.1 PFAM: Sporulation domain protein; KEGG: gbe:GbCGDNIH1_1259 hypothetical protein; sporulation domain-containing protein 1698656 5456144 Plav_1558 Parvibaculum lavamentivorans DS-1 sporulation domain-containing protein YP_001412834.1 1698063 D 402881 CDS YP_001412835.1 154252011 5453724 1698846..1699028 1 NC_009719.1 TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: mmr:Mmar10_1411 ribosomal protein L32; 50S ribosomal protein L32 1699028 5453724 Plav_1559 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L32 YP_001412835.1 1698846 D 402881 CDS YP_001412836.1 154252012 5456158 complement(1699092..1700183) 1 NC_009719.1 KEGG: ajs:Ajs_0454 hypothetical protein; hypothetical protein 1700183 5456158 Plav_1560 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412836.1 1699092 R 402881 CDS YP_001412837.1 154252013 5453938 1700275..1700667 1 NC_009719.1 KEGG: mmr:Mmar10_2387 hypothetical protein; hypothetical protein 1700667 5453938 Plav_1561 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412837.1 1700275 D 402881 CDS YP_001412838.1 154252014 5455870 complement(1700671..1701519) 1 NC_009719.1 PFAM: aminotransferase class IV; KEGG: rxy:Rxyl_0760 aminotransferase, class IV; class IV aminotransferase 1701519 5455870 Plav_1562 Parvibaculum lavamentivorans DS-1 class IV aminotransferase YP_001412838.1 1700671 R 402881 CDS YP_001412839.1 154252015 5456348 complement(1701516..1702115) 1 NC_009719.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: gbe:GbCGDNIH1_0821 anthranilate synthase component II; glutamine amidotransferase of anthranilate synthase 1702115 5456348 Plav_1563 Parvibaculum lavamentivorans DS-1 glutamine amidotransferase of anthranilate synthase YP_001412839.1 1701516 R 402881 CDS YP_001412840.1 154252016 5453446 complement(1702112..1703521) 1 NC_009719.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: rxy:Rxyl_0761 para-aminobenzoate synthase, component I; para-aminobenzoate synthase subunit I 1703521 5453446 Plav_1564 Parvibaculum lavamentivorans DS-1 para-aminobenzoate synthase subunit I YP_001412840.1 1702112 R 402881 CDS YP_001412841.1 154252017 5453963 complement(1703564..1704655) 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: sus:Acid_2544 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1704655 5453963 Plav_1565 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001412841.1 1703564 R 402881 CDS YP_001412842.1 154252018 5454223 1704882..1705685 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reu:Reut_A3281 short chain dehydrogenase; short chain dehydrogenase 1705685 5454223 Plav_1566 Parvibaculum lavamentivorans DS-1 short chain dehydrogenase YP_001412842.1 1704882 D 402881 CDS YP_001412843.1 154252019 5455298 1705715..1706536 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro02669 possible enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 1706536 5455298 Plav_1567 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001412843.1 1705715 D 402881 CDS YP_001412844.1 154252020 5456006 1706546..1706902 1 NC_009719.1 KEGG: hypothetical protein; hypothetical protein 1706902 5456006 Plav_1568 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412844.1 1706546 D 402881 CDS YP_001412845.1 154252021 5456972 1706910..1708499 1 NC_009719.1 TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: mlo:mll6984 gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1708499 5456972 Plav_1569 Parvibaculum lavamentivorans DS-1 gamma-glutamyltransferase YP_001412845.1 1706910 D 402881 CDS YP_001412846.1 154252022 5456220 complement(1708511..1708849) 1 NC_009719.1 hypothetical protein 1708849 5456220 Plav_1570 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412846.1 1708511 R 402881 CDS YP_001412847.1 154252023 5455348 1709140..1710891 1 NC_009719.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; KEGG: bja:blr0951 hypothetical protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1710891 5455348 Plav_1571 Parvibaculum lavamentivorans DS-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001412847.1 1709140 D 402881 CDS YP_001412848.1 154252024 5454970 complement(1710899..1711519) 1 NC_009719.1 TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: hypothetical protein; polyhydroxyalkonate synthesis repressor PhaR 1711519 5454970 Plav_1572 Parvibaculum lavamentivorans DS-1 polyhydroxyalkonate synthesis repressor PhaR YP_001412848.1 1710899 R 402881 CDS YP_001412849.1 154252025 5456342 1711773..1712963 1 NC_009719.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: bra:BRADO0562 acetyl-CoA acetyltransferase with thiolase domain (acetoacetyl-CoA thiolase); acetyl-CoA acetyltransferase 1712963 5456342 Plav_1573 Parvibaculum lavamentivorans DS-1 acetyl-CoA acetyltransferase YP_001412849.1 1711773 D 402881 CDS YP_001412850.1 154252026 5453994 1713047..1713772 1 NC_009719.1 TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rsh:Rsph17029_2402 acetoacetyl-CoA reductase; acetoacetyl-CoA reductase 1713772 5453994 Plav_1574 Parvibaculum lavamentivorans DS-1 acetoacetyl-CoA reductase YP_001412850.1 1713047 D 402881 CDS YP_001412851.1 154252027 5455457 complement(1713845..1714405) 1 NC_009719.1 PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: rru:Rru_A2514 twin-arginine translocation pathway signal; hypothetical protein 1714405 5455457 Plav_1575 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412851.1 1713845 R 402881 CDS YP_001412852.1 154252028 5454686 complement(1714493..1715416) 1 NC_009719.1 PFAM: polysaccharide deacetylase; KEGG: rpd:RPD_2943 polysaccharide deacetylase; polysaccharide deacetylase 1715416 5454686 Plav_1576 Parvibaculum lavamentivorans DS-1 polysaccharide deacetylase YP_001412852.1 1714493 R 402881 CDS YP_001412853.1 154252029 5455245 complement(1715504..1715938) 1 NC_009719.1 PFAM: protein of unknown function DUF985; KEGG: mag:amb0788 hypothetical protein; hypothetical protein 1715938 5455245 Plav_1577 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412853.1 1715504 R 402881 CDS YP_001412854.1 154252030 5454441 complement(1715940..1716710) 1 NC_009719.1 PFAM: beta-lactamase domain protein; KEGG: sme:SMc00708 putative hydroxyacylglutathione hydrolase (glyoxalase II) (GLX II) protein; hydroxyacylglutathione hydrolase 1716710 5454441 Plav_1578 Parvibaculum lavamentivorans DS-1 hydroxyacylglutathione hydrolase YP_001412854.1 1715940 R 402881 CDS YP_001412855.1 154252031 5456156 1716859..1717617 1 NC_009719.1 PFAM: Methyltransferase type 11; KEGG: mag:amb4193 SAM-dependent methyltransferase; type 11 methyltransferase 1717617 5456156 Plav_1579 Parvibaculum lavamentivorans DS-1 type 11 methyltransferase YP_001412855.1 1716859 D 402881 CDS YP_001412856.1 154252032 5456524 complement(1717625..1718251) 1 NC_009719.1 TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: bra:BRADO6460 putative methionine biosynthesis protein (MetW); methionine biosynthesis protein MetW 1718251 5456524 Plav_1580 Parvibaculum lavamentivorans DS-1 methionine biosynthesis protein MetW YP_001412856.1 1717625 R 402881 CDS YP_001412857.1 154252033 5454695 complement(1718248..1719453) 1 NC_009719.1 TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; KEGG: mlo:mlr3538 homoserine O-acetyltransferase; homoserine O-acetyltransferase 1719453 5454695 Plav_1581 Parvibaculum lavamentivorans DS-1 homoserine O-acetyltransferase YP_001412857.1 1718248 R 402881 CDS YP_001412858.1 154252034 5454790 1719659..1720558 1 NC_009719.1 TIGRFAM: chorismate mutase; PFAM: Chorismate mutase; KEGG: rru:Rru_A3265 chorismate mutase; chorismate mutase 1720558 5454790 Plav_1582 Parvibaculum lavamentivorans DS-1 chorismate mutase YP_001412858.1 1719659 D 402881 CDS YP_001412859.1 154252035 5453504 1720548..1721669 1 NC_009719.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: bra:BRADO6463 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 1721669 5453504 Plav_1583 Parvibaculum lavamentivorans DS-1 histidinol-phosphate aminotransferase YP_001412859.1 1720548 D 402881 CDS YP_001412860.1 154252036 5455184 1721666..1722619 1 NC_009719.1 PFAM: Prephenate dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mlo:mll3535 cyclohexadienyl dehydrogenase / prephenate dehydrogenase; prephenate dehydrogenase 1722619 5455184 Plav_1584 Parvibaculum lavamentivorans DS-1 prephenate dehydrogenase YP_001412860.1 1721666 D 402881 CDS YP_001412861.1 154252037 5454875 complement(1722613..1723713) 1 NC_009719.1 KEGG: mmr:Mmar10_2378 hypothetical protein; hypothetical protein 1723713 5454875 Plav_1585 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412861.1 1722613 R 402881 CDS YP_001412862.1 154252038 5453779 1723800..1724348 1 NC_009719.1 PFAM: ChaC family protein; KEGG: bra:BRADO6466 putative cation transport protein ChaC-related; ChaC family protein 1724348 5453779 Plav_1586 Parvibaculum lavamentivorans DS-1 ChaC family protein YP_001412862.1 1723800 D 402881 CDS YP_001412863.1 154252039 5455776 complement(1724290..1725498) 1 NC_009719.1 PFAM: protein of unknown function DUF1006; KEGG: rsq:Rsph17025_0040 protein of unknown function DUF1006; hypothetical protein 1725498 5455776 Plav_1587 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412863.1 1724290 R 402881 CDS YP_001412864.1 154252040 5453786 complement(1725532..1725945) 1 NC_009719.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpe:RPE_2873 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1725945 5453786 Plav_1588 Parvibaculum lavamentivorans DS-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001412864.1 1725532 R 402881 CDS YP_001412865.1 154252041 5453810 complement(1725961..1726425) 1 NC_009719.1 hypothetical protein 1726425 5453810 Plav_1589 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412865.1 1725961 R 402881 CDS YP_001412866.1 154252042 5453524 complement(1726422..1727327) 1 NC_009719.1 PFAM: diacylglycerol kinase catalytic region; KEGG: bra:BRADO2824 conserved hypothetical protein; putative diacylglycerol kinase related protein; diacylglycerol kinase catalytic subunit 1727327 5453524 Plav_1590 Parvibaculum lavamentivorans DS-1 diacylglycerol kinase catalytic subunit YP_001412866.1 1726422 R 402881 CDS YP_001412867.1 154252043 5453435 complement(1727404..1729719) 1 NC_009719.1 TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; KEGG: mag:amb4446 ribonucleotide reductase, alpha subunit; ribonucleoside-diphosphate reductase 1729719 5453435 Plav_1591 Parvibaculum lavamentivorans DS-1 ribonucleoside-diphosphate reductase YP_001412867.1 1727404 R 402881 CDS YP_001412868.1 154252044 5454536 complement(1729840..1730613) 1 NC_009719.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mag:amb4445 1-acyl-sn-glycerol-3-phosphate acyltransferase; phospholipid/glycerol acyltransferase 1730613 5454536 Plav_1592 Parvibaculum lavamentivorans DS-1 phospholipid/glycerol acyltransferase YP_001412868.1 1729840 R 402881 CDS YP_001412869.1 154252045 5456303 complement(1730610..1731236) 1 NC_009719.1 PFAM: protein of unknown function DUF218; KEGG: rle:RL4332 putative transmembrane protein; hypothetical protein 1731236 5456303 Plav_1593 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412869.1 1730610 R 402881 CDS YP_001412870.1 154252046 5455225 complement(1731349..1732332) 1 NC_009719.1 PFAM: protein of unknown function DUF214; KEGG: rpb:RPB_0835 protein of unknown function DUF214; hypothetical protein 1732332 5455225 Plav_1594 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412870.1 1731349 R 402881 CDS YP_001412871.1 154252047 5453800 complement(1732325..1732984) 1 NC_009719.1 TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bov:BOV_1923 cell division ATP-binding protein FtsE; cell division ATP-binding protein FtsE 1732984 5453800 Plav_1595 Parvibaculum lavamentivorans DS-1 cell division ATP-binding protein FtsE YP_001412871.1 1732325 R 402881 CDS YP_001412872.1 154252048 5454457 1733207..1734163 1 NC_009719.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: bbt:BBta_1175 hypothetical protein; Zinc finger-domain-containing protein 1734163 5454457 Plav_1596 Parvibaculum lavamentivorans DS-1 Zinc finger-domain-containing protein YP_001412872.1 1733207 D 402881 CDS YP_001412873.1 154252049 5453594 1734168..1734713 1 NC_009719.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: sme:SMc00719 hypoxanthine-guanine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 1734713 5453594 Plav_1597 Parvibaculum lavamentivorans DS-1 hypoxanthine phosphoribosyltransferase YP_001412873.1 1734168 D 402881 CDS YP_001412874.1 154252050 5453475 1734719..1735102 1 NC_009719.1 PFAM: response regulator receiver; KEGG: rpa:RPA4738 response regulator receiver (CheY-like protein); response regulator receiver protein 1735102 5453475 Plav_1598 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001412874.1 1734719 D 402881 CDS YP_001412875.1 154252051 5455008 complement(1735099..1737597) 1 NC_009719.1 KEGG: mes:Meso_3097 hypothetical protein; hypothetical protein 1737597 5455008 Plav_1599 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412875.1 1735099 R 402881 CDS YP_001412876.1 154252052 5456741 complement(1737648..1738916) 1 NC_009719.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mlo:mlr3508 diaminopimelate decarboxylase; diaminopimelate decarboxylase 1738916 5456741 Plav_1600 Parvibaculum lavamentivorans DS-1 diaminopimelate decarboxylase YP_001412876.1 1737648 R 402881 CDS YP_001412877.1 154252053 5455437 complement(1738968..1739201) 1 NC_009719.1 hypothetical protein 1739201 5455437 Plav_1601 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412877.1 1738968 R 402881 CDS YP_001412878.1 154252054 5455324 complement(1739215..1740597) 1 NC_009719.1 TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: nha:Nham_3477 argininosuccinate lyase; argininosuccinate lyase 1740597 5455324 Plav_1602 Parvibaculum lavamentivorans DS-1 argininosuccinate lyase YP_001412878.1 1739215 R 402881 CDS YP_001412879.1 154252055 5454723 1740652..1741263 1 NC_009719.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rpc:RPC_4876 thioredoxin-like; alkyl hydroperoxide reductase 1741263 5454723 Plav_1603 Parvibaculum lavamentivorans DS-1 alkyl hydroperoxide reductase YP_001412879.1 1740652 D 402881 CDS YP_001412880.1 154252056 5455042 complement(1741257..1742087) 1 NC_009719.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: nfa:nfa22790 hypothetical protein; type 12 methyltransferase 1742087 5455042 Plav_1604 Parvibaculum lavamentivorans DS-1 type 12 methyltransferase YP_001412880.1 1741257 R 402881 CDS YP_001412881.1 154252057 5454439 complement(1742157..1742681) 1 NC_009719.1 PFAM: protein of unknown function DUF1457; hypothetical protein 1742681 5454439 Plav_1605 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412881.1 1742157 R 402881 CDS YP_001412882.1 154252058 5454185 complement(1742747..1743652) 1 NC_009719.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bja:blr1379 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase 1743652 5454185 Plav_1606 Parvibaculum lavamentivorans DS-1 3-hydroxybutyryl-CoA dehydrogenase YP_001412882.1 1742747 R 402881 CDS YP_001412883.1 154252059 5454599 complement(1743821..1744762) 1 NC_009719.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: bja:blr1378 electron transfer flavoprotein large subunit; electron transfer flavoprotein subunit alpha 1744762 5454599 Plav_1607 Parvibaculum lavamentivorans DS-1 electron transfer flavoprotein subunit alpha YP_001412883.1 1743821 R 402881 CDS YP_001412884.1 154252060 5453390 complement(1744759..1745508) 1 NC_009719.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bbt:BBta_1140 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit alpha/beta 1745508 5453390 Plav_1608 Parvibaculum lavamentivorans DS-1 electron transfer flavoprotein subunit alpha/beta YP_001412884.1 1744759 R 402881 CDS YP_001412885.1 154252061 5455134 complement(1745745..1746335) 1 NC_009719.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: atc:AGR_L_2467 hypothetical protein; ATP--cobalamin adenosyltransferase 1746335 5455134 Plav_1609 Parvibaculum lavamentivorans DS-1 ATP--cobalamin adenosyltransferase YP_001412885.1 1745745 R 402881 CDS YP_001412886.1 154252062 5453476 complement(1746344..1746874) 1 NC_009719.1 PFAM: cytochrome B561; KEGG: lpc:LPC_1005 cytochrome b-561 transmembrane protein; cytochrome B561 1746874 5453476 Plav_1610 Parvibaculum lavamentivorans DS-1 cytochrome B561 YP_001412886.1 1746344 R 402881 CDS YP_001412887.1 154252063 5454514 complement(1746929..1747834) 1 NC_009719.1 catalyzes the cleavage of carbon-halogen bonds in aliphatic compounds forming a primary alcohol and a halide; haloalkane dehalogenase 1747834 5454514 Plav_1611 Parvibaculum lavamentivorans DS-1 haloalkane dehalogenase YP_001412887.1 1746929 R 402881 CDS YP_001412888.1 154252064 5455637 complement(1747939..1748130) 1 NC_009719.1 PFAM: Hypoxia induced protein conserved region; KEGG: rpc:RPC_4882 hypothetical protein; hypoxia induced protein 1748130 5455637 Plav_1612 Parvibaculum lavamentivorans DS-1 hypoxia induced protein YP_001412888.1 1747939 R 402881 CDS YP_001412889.1 154252065 5455219 complement(1748130..1749836) 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rsq:Rsph17025_2567 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 1749836 5455219 Plav_1613 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001412889.1 1748130 R 402881 CDS YP_001412890.1 154252066 5455707 1750043..1751515 1 NC_009719.1 PFAM: cation transporter; KEGG: pmy:Pmen_1826 potassium uptake protein, TrkH family; cation transporter 1751515 5455707 Plav_1614 Parvibaculum lavamentivorans DS-1 cation transporter YP_001412890.1 1750043 D 402881 CDS YP_001412891.1 154252067 5454110 complement(1751522..1752094) 1 NC_009719.1 KEGG: bmb:BruAb1_1468 hypothetical protein; hypothetical protein 1752094 5454110 Plav_1615 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412891.1 1751522 R 402881 CDS YP_001412892.1 154252068 5455366 1752237..1752464 1 NC_009719.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: xfa:XF1696 hypothetical protein; CopG/DNA-binding domain-containing protein 1752464 5455366 Plav_1616 Parvibaculum lavamentivorans DS-1 CopG/DNA-binding domain-containing protein YP_001412892.1 1752237 D 402881 CDS YP_001412893.1 154252069 5453440 1752448..1752726 1 NC_009719.1 TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: xft:PD1184 toxin-like protein; addiction module antitoxin 1752726 5453440 Plav_1617 Parvibaculum lavamentivorans DS-1 addiction module antitoxin YP_001412893.1 1752448 D 402881 CDS YP_001412894.1 154252070 5456196 complement(1752733..1753623) 1 NC_009719.1 PFAM: beta-lactamase domain protein; KEGG: rpa:RPA0365 beta-lactamase-like; beta-lactamase domain-containing protein 1753623 5456196 Plav_1618 Parvibaculum lavamentivorans DS-1 beta-lactamase domain-containing protein YP_001412894.1 1752733 R 402881 CDS YP_001412895.1 154252071 5454815 1753746..1754057 1 NC_009719.1 PFAM: regulatory protein ArsR; KEGG: rme:Rmet_2370 transcriptional regulator, ArsR family; regulatory protein ArsR 1754057 5454815 Plav_1619 Parvibaculum lavamentivorans DS-1 regulatory protein ArsR YP_001412895.1 1753746 D 402881 CDS YP_001412896.1 154252072 5456629 1754092..1754613 1 NC_009719.1 PFAM: Rhodanese domain protein; KEGG: rme:Rmet_2371 rhodanese-like protein; rhodanese domain-containing protein 1754613 5456629 Plav_1620 Parvibaculum lavamentivorans DS-1 rhodanese domain-containing protein YP_001412896.1 1754092 D 402881 CDS YP_001412897.1 154252073 5456507 complement(1754624..1755889) 1 NC_009719.1 TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsh:Rsph17029_2620 crotonyl-CoA reductase; crotonyl-CoA reductase 1755889 5456507 Plav_1621 Parvibaculum lavamentivorans DS-1 crotonyl-CoA reductase YP_001412897.1 1754624 R 402881 CDS YP_001412898.1 154252074 5454522 1756080..1757180 1 NC_009719.1 KEGG: mmr:Mmar10_1630 hypothetical protein; hypothetical protein 1757180 5454522 Plav_1622 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412898.1 1756080 D 402881 CDS YP_001412899.1 154252075 5456301 complement(1757264..1759084) 1 NC_009719.1 KEGG: hne:HNE_1286 cyclododecanone monooxygenase; cyclohexanone monooxygenase 1759084 5456301 Plav_1623 Parvibaculum lavamentivorans DS-1 cyclohexanone monooxygenase YP_001412899.1 1757264 R 402881 CDS YP_001412900.1 154252076 5454525 complement(1759261..1760508) 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rpd:RPD_1248 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 1760508 5454525 Plav_1624 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001412900.1 1759261 R 402881 CDS YP_001412901.1 154252077 5456327 1760695..1762698 1 NC_009719.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; KEGG: rru:Rru_A3062 methylmalonyl-CoA mutase-like; methylmalonyl-CoA mutase large subunit 1762698 5456327 Plav_1625 Parvibaculum lavamentivorans DS-1 methylmalonyl-CoA mutase large subunit YP_001412901.1 1760695 D 402881 CDS YP_001412902.1 154252078 5454578 1762901..1763194 1 NC_009719.1 hypothetical protein 1763194 5454578 Plav_1626 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412902.1 1762901 D 402881 CDS YP_001412903.1 154252079 5455285 1763191..1764318 1 NC_009719.1 hypothetical protein 1764318 5455285 Plav_1627 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412903.1 1763191 D 402881 CDS YP_001412904.1 154252080 5455925 1764327..1764998 1 NC_009719.1 hypothetical protein 1764998 5455925 Plav_1628 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412904.1 1764327 D 402881 CDS YP_001412905.1 154252081 5453436 1765067..1766014 1 NC_009719.1 PFAM: Auxin Efflux Carrier; KEGG: rsh:Rsph17029_2331 auxin efflux carrier; auxin efflux carrier 1766014 5453436 Plav_1629 Parvibaculum lavamentivorans DS-1 auxin efflux carrier YP_001412905.1 1765067 D 402881 CDS YP_001412906.1 154252082 5456297 complement(1766017..1767069) 1 NC_009719.1 PFAM: acyltransferase 3; KEGG: nha:Nham_0454 acyltransferase 3; acyltransferase 3 1767069 5456297 Plav_1630 Parvibaculum lavamentivorans DS-1 acyltransferase 3 YP_001412906.1 1766017 R 402881 CDS YP_001412907.1 154252083 5454166 complement(1767181..1768083) 1 NC_009719.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: sme:SMc00735 glutamyl-tRNA synthetase; glutamyl-tRNA synthetase 1768083 5454166 Plav_1631 Parvibaculum lavamentivorans DS-1 glutamyl-tRNA synthetase YP_001412907.1 1767181 R 402881 CDS YP_001412908.1 154252084 5456670 1768156..1768830 1 NC_009719.1 PFAM: phospholipase/Carboxylesterase; KEGG: acr:Acry_1326 phospholipase/carboxylesterase; phospholipase/carboxylesterase 1768830 5456670 Plav_1632 Parvibaculum lavamentivorans DS-1 phospholipase/carboxylesterase YP_001412908.1 1768156 D 402881 CDS YP_001412909.1 154252085 5456785 1768939..1769499 1 NC_009719.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mlo:mll3477 hypothetical protein; HNH endonuclease 1769499 5456785 Plav_1633 Parvibaculum lavamentivorans DS-1 HNH endonuclease YP_001412909.1 1768939 D 402881 CDS YP_001412910.1 154252086 5456323 complement(1769506..1770087) 1 NC_009719.1 PFAM: Ubiquinone biosynthesis protein COQ7; KEGG: mmr:Mmar10_2348 ubiquinone biosynthesis protein COQ7; ubiquinone biosynthesis protein COQ7 1770087 5456323 Plav_1634 Parvibaculum lavamentivorans DS-1 ubiquinone biosynthesis protein COQ7 YP_001412910.1 1769506 R 402881 CDS YP_001412911.1 154252087 5454805 complement(1770087..1770617) 1 NC_009719.1 PFAM: Disulphide bond formation protein DsbB; KEGG: rpc:RPC_0627 disulphide bond formation protein DsbB; disulfide bond formation protein DsbB 1770617 5454805 Plav_1635 Parvibaculum lavamentivorans DS-1 disulfide bond formation protein DsbB YP_001412911.1 1770087 R 402881 CDS YP_001412912.1 154252088 5453670 1771204..1771848 1 NC_009719.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: bpe:BP2156 hypothetical protein; NADPH-dependent FMN reductase 1771848 5453670 Plav_1636 Parvibaculum lavamentivorans DS-1 NADPH-dependent FMN reductase YP_001412912.1 1771204 D 402881 CDS YP_001412913.1 154252089 5456884 1771871..1773247 1 NC_009719.1 PFAM: glutamine synthetase catalytic region; KEGG: psa:PST_1993 glutamate--ammonia ligase; glutamine synthetase 1773247 5456884 Plav_1637 Parvibaculum lavamentivorans DS-1 glutamine synthetase YP_001412913.1 1771871 D 402881 CDS YP_001412914.1 154252090 5453811 1773273..1774031 1 NC_009719.1 PFAM: Creatininase; KEGG: mva:Mvan_1602 creatininase; creatininase 1774031 5453811 Plav_1638 Parvibaculum lavamentivorans DS-1 creatininase YP_001412914.1 1773273 D 402881 CDS YP_001412915.1 154252091 5453754 1774065..1774712 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: mfa:Mfla_2564 transcriptional regulator, TetR family; TetR family transcriptional regulator 1774712 5453754 Plav_1639 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001412915.1 1774065 D 402881 CDS YP_001412916.1 154252092 5454708 complement(1774720..1775400) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: transcriptional regulator, TetR family; TetR family transcriptional regulator 1775400 5454708 Plav_1640 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001412916.1 1774720 R 402881 CDS YP_001412917.1 154252093 5456961 1775508..1776302 1 NC_009719.1 KEGG: hne:HNE_2082 hypothetical protein; hypothetical protein 1776302 5456961 Plav_1641 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412917.1 1775508 D 402881 CDS YP_001412918.1 154252094 5454444 1776396..1776755 1 NC_009719.1 PFAM: arsenate reductase and related; KEGG: rpe:RPE_3058 hypothetical protein; arsenate reductase-like protein 1776755 5454444 Plav_1642 Parvibaculum lavamentivorans DS-1 arsenate reductase-like protein YP_001412918.1 1776396 D 402881 CDS YP_001412919.1 154252095 5456572 1776752..1777348 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcl:ABC1441 acetyltransferase, GNAT family; N-acetyltransferase GCN5 1777348 5456572 Plav_1643 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001412919.1 1776752 D 402881 CDS YP_001412920.1 154252096 5453623 complement(1777339..1777641) 1 NC_009719.1 PFAM: SirA family protein; KEGG: rsh:Rsph17029_0807 SirA family protein; SirA family protein 1777641 5453623 Plav_1644 Parvibaculum lavamentivorans DS-1 SirA family protein YP_001412920.1 1777339 R 402881 CDS YP_001412921.1 154252097 5454932 1777848..1779650 1 NC_009719.1 activates fatty acids by binding to coenzyme A; may be involved in acyclic terpene utilization; long-chain-acyl-CoA synthetase 1779650 5454932 Plav_1645 Parvibaculum lavamentivorans DS-1 long-chain-acyl-CoA synthetase YP_001412921.1 1777848 D 402881 CDS YP_001412922.1 154252098 5456258 complement(1779717..1780934) 1 NC_009719.1 PFAM: luciferase family protein; KEGG: mes:Meso_3721 luciferase-like; luciferase family protein 1780934 5456258 Plav_1646 Parvibaculum lavamentivorans DS-1 luciferase family protein YP_001412922.1 1779717 R 402881 CDS YP_001412923.1 154252099 5454397 complement(1780998..1781645) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: bpd:BURPS668_A2057 transcriptional regulator, TetR family; TetR family transcriptional regulator 1781645 5454397 Plav_1647 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001412923.1 1780998 R 402881 CDS YP_001412924.1 154252100 5455916 1781812..1782621 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hne:HNE_1957 putative 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX; short-chain dehydrogenase/reductase SDR 1782621 5455916 Plav_1648 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001412924.1 1781812 D 402881 CDS YP_001412925.1 154252101 5455807 complement(1782626..1783693) 1 NC_009719.1 PFAM: Hyaluronidase; KEGG: maq:Maqu_3474 hyaluronidase; hyaluronidase 1783693 5455807 Plav_1649 Parvibaculum lavamentivorans DS-1 hyaluronidase YP_001412925.1 1782626 R 402881 CDS YP_001412926.1 154252102 5454338 complement(1783695..1784627) 1 NC_009719.1 KEGG: hne:HNE_3384 hypothetical protein; hypothetical protein 1784627 5454338 Plav_1650 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412926.1 1783695 R 402881 CDS YP_001412927.1 154252103 5453516 complement(1784636..1785421) 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: hne:HNE_2391 glutathione S-transferase; glutathione S-transferase domain-containing protein 1785421 5453516 Plav_1651 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001412927.1 1784636 R 402881 CDS YP_001412928.1 154252104 5454214 complement(1785527..1786507) 1 NC_009719.1 PFAM: beta-lactamase domain protein; KEGG: hne:HNE_3461 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 1786507 5454214 Plav_1652 Parvibaculum lavamentivorans DS-1 beta-lactamase domain-containing protein YP_001412928.1 1785527 R 402881 CDS YP_001412929.1 154252105 5453419 1786759..1788078 1 NC_009719.1 KEGG: sru:SRU_1321 hypothetical protein; hypothetical protein 1788078 5453419 Plav_1653 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412929.1 1786759 D 402881 CDS YP_001412930.1 154252106 5455293 1788075..1788383 1 NC_009719.1 hypothetical protein 1788383 5455293 Plav_1654 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412930.1 1788075 D 402881 CDS YP_001412931.1 154252107 5454369 1788399..1789103 1 NC_009719.1 hypothetical protein 1789103 5454369 Plav_1655 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412931.1 1788399 D 402881 CDS YP_001412932.1 154252108 5456723 1789100..1790236 1 NC_009719.1 KEGG: sru:SRU_0279 hypothetical protein; hypothetical protein 1790236 5456723 Plav_1656 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412932.1 1789100 D 402881 CDS YP_001412933.1 154252109 5454851 complement(1790240..1791079) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bja:blr2256 hypothetical oxidoreductase; short-chain dehydrogenase/reductase SDR 1791079 5454851 Plav_1657 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001412933.1 1790240 R 402881 CDS YP_001412934.1 154252110 5453902 complement(1791076..1791639) 1 NC_009719.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: vei:Veis_0111 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 1791639 5453902 Plav_1658 Parvibaculum lavamentivorans DS-1 carboxymuconolactone decarboxylase YP_001412934.1 1791076 R 402881 CDS YP_001412935.1 154252111 5455089 complement(1791643..1792194) 1 NC_009719.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: vei:Veis_0111 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 1792194 5455089 Plav_1659 Parvibaculum lavamentivorans DS-1 carboxymuconolactone decarboxylase YP_001412935.1 1791643 R 402881 CDS YP_001412936.1 154252112 5456527 1792416..1793987 1 NC_009719.1 PFAM: AMP-dependent synthetase and ligase; KEGG: hne:HNE_3427 feruloyl-CoA synthetase; AMP-dependent synthetase and ligase 1793987 5456527 Plav_1660 Parvibaculum lavamentivorans DS-1 AMP-dependent synthetase and ligase YP_001412936.1 1792416 D 402881 CDS YP_001412937.1 154252113 5455333 1794077..1795933 1 NC_009719.1 PFAM: AMP-dependent synthetase and ligase; KEGG: feruloyl-CoA synthase; acyl-CoA synthetase 1795933 5455333 Plav_1661 Parvibaculum lavamentivorans DS-1 acyl-CoA synthetase YP_001412937.1 1794077 D 402881 CDS YP_001412938.1 154252114 5454204 1795936..1796484 1 NC_009719.1 PFAM: protein of unknown function DUF924; KEGG: xcb:XC_0794 hypothetical protein; hypothetical protein 1796484 5454204 Plav_1662 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412938.1 1795936 D 402881 CDS YP_001412939.1 154252115 5455749 1796556..1797284 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bja:bll7157 putative glucose 1-dehydrogenase; short-chain dehydrogenase/reductase SDR 1797284 5455749 Plav_1663 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001412939.1 1796556 D 402881 CDS YP_001412940.1 154252116 5455738 1797468..1797674 1 NC_009719.1 KEGG: mmr:Mmar10_2307 hypothetical protein; hypothetical protein 1797674 5455738 Plav_1664 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412940.1 1797468 D 402881 CDS YP_001412941.1 154252117 5454820 1797760..1798701 1 NC_009719.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: reu:Reut_B5462 esterase/lipase/thioesterase; alpha/beta hydrolase domain-containing protein 1798701 5454820 Plav_1665 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase domain-containing protein YP_001412941.1 1797760 D 402881 CDS YP_001412942.1 154252118 5455011 complement(1798698..1799477) 1 NC_009719.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aeh:Mlg_2555 HAD-superfamily subfamily IIA hydrolase like protein; HAD family hydrolase 1799477 5455011 Plav_1666 Parvibaculum lavamentivorans DS-1 HAD family hydrolase YP_001412942.1 1798698 R 402881 CDS YP_001412943.1 154252119 5456291 1799601..1801187 1 NC_009719.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rpa:RPA4829 putative crotonobetaine/carnitine-CoA ligase; AMP-dependent synthetase and ligase 1801187 5456291 Plav_1667 Parvibaculum lavamentivorans DS-1 AMP-dependent synthetase and ligase YP_001412943.1 1799601 D 402881 CDS YP_001412944.1 154252120 5454528 1801247..1802899 1 NC_009719.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: mag:amb3695 sulfate permease and related transporters; sulfate transporter 1802899 5454528 Plav_1668 Parvibaculum lavamentivorans DS-1 sulfate transporter YP_001412944.1 1801247 D 402881 CDS YP_001412945.1 154252121 5454284 complement(1802904..1804574) 1 NC_009719.1 PFAM: FAD linked oxidase domain protein; KEGG: lic:LIC11674 alkylglycerone-phosphate synthase; alkylglycerone-phosphate synthase 1804574 5454284 Plav_1669 Parvibaculum lavamentivorans DS-1 alkylglycerone-phosphate synthase YP_001412945.1 1802904 R 402881 CDS YP_001412946.1 154252122 5454910 complement(1804600..1805550) 1 NC_009719.1 PFAM: diacylglycerol kinase catalytic region; KEGG: mxa:MXAN_4683 conserved hypothetical protein TIGR00147; diacylglycerol kinase catalytic subunit 1805550 5454910 Plav_1670 Parvibaculum lavamentivorans DS-1 diacylglycerol kinase catalytic subunit YP_001412946.1 1804600 R 402881 CDS YP_001412947.1 154252123 5454568 complement(1805547..1807277) 1 NC_009719.1 PFAM: FAD dependent oxidoreductase; KEGG: lic:LIC11675 glycerol-3-phosphate dehydrogenase; FAD dependent oxidoreductase 1807277 5454568 Plav_1671 Parvibaculum lavamentivorans DS-1 FAD dependent oxidoreductase YP_001412947.1 1805547 R 402881 CDS YP_001412948.1 154252124 5454345 1807427..1808239 1 NC_009719.1 PFAM: regulatory protein LuxR; KEGG: swi:Swit_1997 regulatory protein, LuxR; regulatory protein LuxR 1808239 5454345 Plav_1672 Parvibaculum lavamentivorans DS-1 regulatory protein LuxR YP_001412948.1 1807427 D 402881 CDS YP_001412949.1 154252125 5454721 complement(1808236..1808883) 1 NC_009719.1 PFAM: DSBA oxidoreductase; KEGG: rpa:RPA1011 DsbA oxidoreductase; DSBA oxidoreductase 1808883 5454721 Plav_1673 Parvibaculum lavamentivorans DS-1 DSBA oxidoreductase YP_001412949.1 1808236 R 402881 CDS YP_001412950.1 154252126 5454855 1809034..1809942 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: eli:ELI_11645 probable hydrolase; alpha/beta hydrolase fold protein 1809942 5454855 Plav_1674 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001412950.1 1809034 D 402881 CDS YP_001412951.1 154252127 5454718 1809947..1810852 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: sal:Sala_2222 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1810852 5454718 Plav_1675 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001412951.1 1809947 D 402881 CDS YP_001412952.1 154252128 5454592 1811058..1811774 1 NC_009719.1 PFAM: ThiJ/PfpI domain protein; KEGG: reh:H16_B2498 intracellular protease/amidase; ThiJ/PfpI domain-containing protein 1811774 5454592 Plav_1676 Parvibaculum lavamentivorans DS-1 ThiJ/PfpI domain-containing protein YP_001412952.1 1811058 D 402881 CDS YP_001412953.1 154252129 5456257 1812053..1813123 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: sal:Sala_2222 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1813123 5456257 Plav_1677 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001412953.1 1812053 D 402881 CDS YP_001412954.1 154252130 5453557 complement(1813289..1814056) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: stp:Strop_1599 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1814056 5453557 Plav_1678 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001412954.1 1813289 R 402881 CDS YP_001412955.1 154252131 5454740 complement(1814357..1816207) 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr1158 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1816207 5454740 Plav_1679 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001412955.1 1814357 R 402881 CDS YP_001412956.1 154252132 5454658 1816651..1818966 1 NC_009719.1 KEGG: nmu:Nmul_A0143 ATP-dependent endonuclease of the OLD family-like; hypothetical protein 1818966 5454658 Plav_1680 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412956.1 1816651 D 402881 CDS YP_001412957.1 154252133 5455002 1819086..1819646 1 NC_009719.1 PFAM: protein of unknown function DUF1457; KEGG: sme:SMc01000 hypothetical protein; hypothetical protein 1819646 5455002 Plav_1681 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412957.1 1819086 D 402881 CDS YP_001412958.1 154252134 5453799 complement(1819665..1820159) 1 NC_009719.1 hypothetical protein 1820159 5453799 Plav_1682 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412958.1 1819665 R 402881 CDS YP_001412959.1 154252135 5456296 1820510..1820974 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: eli:ELI_05475 hypothetical protein; thioesterase superfamily protein 1820974 5456296 Plav_1683 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001412959.1 1820510 D 402881 CDS YP_001412960.1 154252136 5455050 1821237..1821791 1 NC_009719.1 PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: sfr:Sfri_0734 OmpA domain protein transmembrane region-containing protein; OmpA domain-containing protein 1821791 5455050 Plav_1684 Parvibaculum lavamentivorans DS-1 OmpA domain-containing protein YP_001412960.1 1821237 D 402881 CDS YP_001412961.1 154252137 5456593 complement(1821908..1822717) 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpb:RPB_1685 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1822717 5456593 Plav_1685 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001412961.1 1821908 R 402881 CDS YP_001412962.1 154252138 5453607 complement(1822791..1823129) 1 NC_009719.1 hypothetical protein 1823129 5453607 Plav_1686 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412962.1 1822791 R 402881 CDS YP_001412963.1 154252139 5454768 1823278..1823688 1 NC_009719.1 KEGG: mmr:Mmar10_0815 hypothetical protein; hypothetical protein 1823688 5454768 Plav_1687 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412963.1 1823278 D 402881 CDS YP_001412964.1 154252140 5456206 complement(1823670..1824626) 1 NC_009719.1 PFAM: glycosyl transferase family 9; KEGG: pub:SAR11_1206 heptosyltransferase family protein; glycosyl transferase family protein 1824626 5456206 Plav_1688 Parvibaculum lavamentivorans DS-1 glycosyl transferase family protein YP_001412964.1 1823670 R 402881 CDS YP_001412965.1 154252141 5455862 complement(1824641..1825360) 1 NC_009719.1 PFAM: peptidase S24 S26A and S26B; SMART: helix-turn-helix domain protein; KEGG: ppd:Ppro_0272 putative phage repressor; putative phage repressor 1825360 5455862 Plav_1689 Parvibaculum lavamentivorans DS-1 putative phage repressor YP_001412965.1 1824641 R 402881 CDS YP_001412966.1 154252142 5455400 1826026..1826673 1 NC_009719.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mag:amb3889 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; two component LuxR family transcriptional regulator 1826673 5455400 Plav_1690 Parvibaculum lavamentivorans DS-1 two component LuxR family transcriptional regulator YP_001412966.1 1826026 D 402881 CDS YP_001412967.1 154252143 5455033 1826727..1827545 1 NC_009719.1 PFAM: nuclease (SNase domain protein); KEGG: mmr:Mmar10_2298 nuclease (SNase domain protein); nuclease 1827545 5455033 Plav_1691 Parvibaculum lavamentivorans DS-1 nuclease YP_001412967.1 1826727 D 402881 CDS YP_001412968.1 154252144 5453432 1827524..1829038 1 NC_009719.1 PFAM: peptidase M48 Ste24p; KEGG: mag:amb0300 putative Zn-dependent protease; peptidase M48 Ste24p 1829038 5453432 Plav_1692 Parvibaculum lavamentivorans DS-1 peptidase M48 Ste24p YP_001412968.1 1827524 D 402881 CDS YP_001412969.1 154252145 5454148 complement(1829044..1829940) 1 NC_009719.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: hne:HNE_3450 putative alternative sigma factor RpoH; RNA polymerase sigma-32 subunit RpoH 1829940 5454148 Plav_1693 Parvibaculum lavamentivorans DS-1 RNA polymerase sigma-32 subunit RpoH YP_001412969.1 1829044 R 402881 CDS YP_001412970.1 154252146 5454346 complement(1830149..1831201) 1 NC_009719.1 PFAM: transcription factor CarD; KEGG: rpd:RPD_0278 transcription factor CarD; CarD family transcriptional regulator 1831201 5454346 Plav_1694 Parvibaculum lavamentivorans DS-1 CarD family transcriptional regulator YP_001412970.1 1830149 R 402881 CDS YP_001412971.1 154252147 5453465 complement(1831646..1831984) 1 NC_009719.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mlo:mlr3855 ferredoxin II; 4Fe-4S ferredoxin 1831984 5453465 Plav_1695 Parvibaculum lavamentivorans DS-1 4Fe-4S ferredoxin YP_001412971.1 1831646 R 402881 CDS YP_001412972.1 154252148 5455888 complement(1832048..1832512) 1 NC_009719.1 PFAM: protein of unknown function DUF1332; KEGG: rru:Rru_A0076 protein of unknown function DUF1332; hypothetical protein 1832512 5455888 Plav_1696 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412972.1 1832048 R 402881 CDS YP_001412973.1 154252149 5455980 complement(1832569..1832964) 1 NC_009719.1 PFAM: RNA-binding S4 domain protein; KEGG: rde:RD1_1823 heat shock protein, putative; RNA-binding S4 domain-containing protein 1832964 5455980 Plav_1697 Parvibaculum lavamentivorans DS-1 RNA-binding S4 domain-containing protein YP_001412973.1 1832569 R 402881 CDS YP_001412974.1 154252150 5456469 complement(1832970..1835963) 1 NC_009719.1 PFAM: helicase domain protein; KEGG: rpa:RPA0491 possible MgpS, ATP-dependent helicase; helicase domain-containing protein 1835963 5456469 Plav_1698 Parvibaculum lavamentivorans DS-1 helicase domain-containing protein YP_001412974.1 1832970 R 402881 CDS YP_001412975.1 154252151 5453431 1836318..1837613 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: hne:HNE_0809 acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein 1837613 5453431 Plav_1699 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001412975.1 1836318 D 402881 CDS YP_001412976.1 154252152 5454366 complement(1837643..1840039) 1 NC_009719.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: rru:Rru_A3213 PAS/PAC sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 1840039 5454366 Plav_1700 Parvibaculum lavamentivorans DS-1 multi-sensor signal transduction histidine kinase YP_001412976.1 1837643 R 402881 CDS YP_001412977.1 154252153 5456423 complement(1840194..1840886) 1 NC_009719.1 hypothetical protein 1840886 5456423 Plav_1701 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412977.1 1840194 R 402881 CDS YP_001412978.1 154252154 5454542 1841160..1843316 1 NC_009719.1 MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 1843316 5454542 Plav_1702 Parvibaculum lavamentivorans DS-1 methylmalonyl-CoA mutase YP_001412978.1 1841160 D 402881 CDS YP_001412979.1 154252155 5454169 1843365..1843844 1 NC_009719.1 hypothetical protein 1843844 5454169 Plav_1703 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412979.1 1843365 D 402881 CDS YP_001412980.1 154252156 5456533 complement(1843848..1844741) 1 NC_009719.1 KEGG: rpe:RPE_0128 hypothetical protein; hypothetical protein 1844741 5456533 Plav_1704 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412980.1 1843848 R 402881 CDS YP_001412981.1 154252157 5456642 1844871..1845911 1 NC_009719.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 1845911 5456642 Plav_1705 Parvibaculum lavamentivorans DS-1 arginine/ornithine transport system ATPase YP_001412981.1 1844871 D 402881 CDS YP_001412982.1 154252158 5454355 1846023..1846313 1 NC_009719.1 PFAM: ribosomal protein L28; KEGG: ret:RHE_CH03816 50S ribosomal protein L28; 50S ribosomal protein L28 1846313 5454355 Plav_1706 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L28 YP_001412982.1 1846023 D 402881 CDS YP_001412983.1 154252159 5455390 1846469..1847149 1 NC_009719.1 KEGG: bov:BOV_1938 hypothetical protein; hypothetical protein 1847149 5455390 Plav_1707 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412983.1 1846469 D 402881 CDS YP_001412984.1 154252160 5454251 complement(1847067..1848224) 1 NC_009719.1 KEGG: rpc:RPC_0541 hypothetical protein; hypothetical protein 1848224 5454251 Plav_1708 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412984.1 1847067 R 402881 CDS YP_001412985.1 154252161 5455073 complement(1848347..1849759) 1 NC_009719.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mlo:mll4906 multidrug efflux protein (NorM); MATE efflux family protein 1849759 5455073 Plav_1709 Parvibaculum lavamentivorans DS-1 MATE efflux family protein YP_001412985.1 1848347 R 402881 CDS YP_001412986.1 154252162 5453404 complement(1849833..1851014) 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: rle:RL2426 putative transmembrane protein; major facilitator superfamily transporter 1851014 5453404 Plav_1710 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001412986.1 1849833 R 402881 CDS YP_001412987.1 154252163 5454825 1851167..1851799 1 NC_009719.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: aha:AHA_3605 hypothetical protein; putative transcriptional regulator 1851799 5454825 Plav_1711 Parvibaculum lavamentivorans DS-1 putative transcriptional regulator YP_001412987.1 1851167 D 402881 CDS YP_001412988.1 154252164 5454727 complement(1851796..1853712) 1 NC_009719.1 KEGG: bbt:BBta_7564 aerobic cobaltochelatase CobT subunit (cobalamin biosynthesis); TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit; SMART: von Willebrand factor type A; cobalt chelatase large subunit 1853712 5454727 Plav_1712 Parvibaculum lavamentivorans DS-1 cobalt chelatase large subunit YP_001412988.1 1851796 R 402881 CDS YP_001412989.1 154252165 5456008 complement(1853750..1854745) 1 NC_009719.1 TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities AAA_5; KEGG: mes:Meso_3069 cobalt chelatase, pCobS small subunit; cobalt chelatase small subunit 1854745 5456008 Plav_1713 Parvibaculum lavamentivorans DS-1 cobalt chelatase small subunit YP_001412989.1 1853750 R 402881 CDS YP_001412990.1 154252166 5456188 complement(1854886..1855479) 1 NC_009719.1 PFAM: heat shock protein DnaJ domain protein; KEGG: bov:BOV_1947 DnaJ domain protein; heat shock protein DnaJ domain-containing protein 1855479 5456188 Plav_1714 Parvibaculum lavamentivorans DS-1 heat shock protein DnaJ domain-containing protein YP_001412990.1 1854886 R 402881 CDS YP_001412991.1 154252167 5455560 1855650..1855928 1 NC_009719.1 PFAM: BolA family protein; KEGG: rpc:RPC_0535 BolA-like protein; BolA family protein 1855928 5455560 Plav_1715 Parvibaculum lavamentivorans DS-1 BolA family protein YP_001412991.1 1855650 D 402881 CDS YP_001412992.1 154252168 5454065 complement(1855931..1857220) 1 NC_009719.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: bov:BOV_1949 CBS domain protein; hypothetical protein 1857220 5454065 Plav_1716 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412992.1 1855931 R 402881 CDS YP_001412993.1 154252169 5453973 complement(1857222..1858340) 1 NC_009719.1 PFAM: 3-dehydroquinate synthase; KEGG: sil:SPO1635 3-dehydroquinate synthase; 3-dehydroquinate synthase 1858340 5453973 Plav_1717 Parvibaculum lavamentivorans DS-1 3-dehydroquinate synthase YP_001412993.1 1857222 R 402881 CDS YP_001412994.1 154252170 5455314 complement(1858333..1858959) 1 NC_009719.1 PFAM: shikimate kinase; KEGG: rpe:RPE_0143 shikimate kinase; shikimate kinase 1858959 5455314 Plav_1718 Parvibaculum lavamentivorans DS-1 shikimate kinase YP_001412994.1 1858333 R 402881 CDS YP_001412995.1 154252171 5456004 1859326..1861281 1 NC_009719.1 KEGG: mag:amb3928 antifreeze glycopeptide polyprotein precursor; hypothetical protein 1861281 5456004 Plav_1719 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412995.1 1859326 D 402881 CDS YP_001412996.1 154252172 5455675 1861299..1862258 1 NC_009719.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sme:SMc00691 probable integrase/recombinase DNA recombination protein; tyrosine recombinase XerD 1862258 5455675 Plav_1720 Parvibaculum lavamentivorans DS-1 tyrosine recombinase XerD YP_001412996.1 1861299 D 402881 CDS YP_001412997.1 154252173 5454000 complement(1862255..1863154) 1 NC_009719.1 TIGRFAM: RNA polymerase sigma-70; RNA polymerase sigma-70 ECF type; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bte:BTH_I0997 RNA polymerase sigma-70 factor, ECF family; ECF subfamily RNA polymerase sigma-24 factor 1863154 5454000 Plav_1721 Parvibaculum lavamentivorans DS-1 ECF subfamily RNA polymerase sigma-24 factor YP_001412997.1 1862255 R 402881 CDS YP_001412998.1 154252174 5456302 complement(1863151..1863705) 1 NC_009719.1 KEGG: sus:Acid_3604 hypothetical protein; hypothetical protein 1863705 5456302 Plav_1722 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412998.1 1863151 R 402881 CDS YP_001412999.1 154252175 5456565 complement(1863724..1864149) 1 NC_009719.1 KEGG: hypothetical protein; hypothetical protein 1864149 5456565 Plav_1723 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001412999.1 1863724 R 402881 CDS YP_001413000.1 154252176 5456538 1864388..1865347 1 NC_009719.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit; KEGG: rpb:RPB_0532 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 1865347 5456538 Plav_1724 Parvibaculum lavamentivorans DS-1 acetyl-CoA carboxylase, carboxyl transferase subunit alpha YP_001413000.1 1864388 D 402881 CDS YP_001413001.1 154252177 5453977 1865436..1865969 1 NC_009719.1 PFAM: protein of unknown function DUF1457; hypothetical protein 1865969 5453977 Plav_1725 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413001.1 1865436 D 402881 CDS YP_001413002.1 154252178 5455958 complement(1865966..1867732) 1 NC_009719.1 PFAM: Citrate transporter; TrkA-C domain protein; KEGG: mhu:Mhun_0633 TrkA-C; citrate transporter 1867732 5455958 Plav_1726 Parvibaculum lavamentivorans DS-1 citrate transporter YP_001413002.1 1865966 R 402881 CDS YP_001413003.1 154252179 5456412 complement(1867729..1868952) 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: bcl:ABC1387 epoxide hydrolase 1; epocide hydrolase domain-containing protein 1868952 5456412 Plav_1727 Parvibaculum lavamentivorans DS-1 epocide hydrolase domain-containing protein YP_001413003.1 1867729 R 402881 CDS YP_001413004.1 154252180 5453904 complement(1868961..1870151) 1 NC_009719.1 PFAM: Epoxide hydrolase domain protein; KEGG: hne:HNE_2052 epoxide hydrolase; epocide hydrolase domain-containing protein 1870151 5453904 Plav_1728 Parvibaculum lavamentivorans DS-1 epocide hydrolase domain-containing protein YP_001413004.1 1868961 R 402881 CDS YP_001413005.1 154252181 5453852 1870294..1871655 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: pat:Patl_3455 major facilitator superfamily MFS_1; major facilitator superfamily transporter 1871655 5453852 Plav_1729 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001413005.1 1870294 D 402881 CDS YP_001413006.1 154252182 5453608 complement(1871726..1874533) 1 NC_009719.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: bra:BRADO0590 preprotein translocase SecA subunit; preprotein translocase subunit SecA 1874533 5453608 Plav_1730 Parvibaculum lavamentivorans DS-1 preprotein translocase subunit SecA YP_001413006.1 1871726 R 402881 CDS YP_001413007.1 154252183 5455626 1874685..1875548 1 NC_009719.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rpa:RPA0511 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1875548 5455626 Plav_1731 Parvibaculum lavamentivorans DS-1 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001413007.1 1874685 D 402881 CDS YP_001413008.1 154252184 5454935 1875584..1877029 1 NC_009719.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; KEGG: rru:Rru_A0394 amino-acid N-acetyltransferase; arginine biosynthesis bifunctional protein ArgJ 1877029 5454935 Plav_1732 Parvibaculum lavamentivorans DS-1 arginine biosynthesis bifunctional protein ArgJ YP_001413008.1 1875584 D 402881 CDS YP_001413009.1 154252185 5456378 1877116..1877550 1 NC_009719.1 TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: rle:RL4294 putative NTP pyrophosphohydrolase; mutator MutT protein 1877550 5456378 Plav_1733 Parvibaculum lavamentivorans DS-1 mutator MutT protein YP_001413009.1 1877116 D 402881 CDS YP_001413010.1 154252186 5453719 1877579..1877740 1 NC_009719.1 PFAM: Flp/Fap pilin component; Flp/Fap pilin component 1877740 5453719 Plav_1734 Parvibaculum lavamentivorans DS-1 Flp/Fap pilin component YP_001413010.1 1877579 D 402881 CDS YP_001413011.1 154252187 5455272 complement(1877737..1878699) 1 NC_009719.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: hypothetical protein; type 11 methyltransferase 1878699 5455272 Plav_1735 Parvibaculum lavamentivorans DS-1 type 11 methyltransferase YP_001413011.1 1877737 R 402881 CDS YP_001413012.1 154252188 5455621 1878748..1879524 1 NC_009719.1 PFAM: phosphoribosyltransferase; KEGG: bbt:BBta_7594 putative competence protein F (ComF); phosphoribosyltransferase 1879524 5455621 Plav_1736 Parvibaculum lavamentivorans DS-1 phosphoribosyltransferase YP_001413012.1 1878748 D 402881 CDS YP_001413013.1 154252189 5456939 1879582..1879839 1 NC_009719.1 TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: jan:Jann_0296 glutaredoxin, GrxC; glutaredoxin 3 1879839 5456939 Plav_1737 Parvibaculum lavamentivorans DS-1 glutaredoxin 3 YP_001413013.1 1879582 D 402881 CDS YP_001413014.1 154252190 5453424 1879844..1880695 1 NC_009719.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: hne:HNE_0584 hydrolase, carbon-nitrogen family; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1880695 5453424 Plav_1738 Parvibaculum lavamentivorans DS-1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001413014.1 1879844 D 402881 CDS YP_001413015.1 154252191 5453897 1880692..1881129 1 NC_009719.1 PFAM: protein of unknown function DUF1178; KEGG: bra:BRADO0580 hypothetical protein; hypothetical protein 1881129 5453897 Plav_1739 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413015.1 1880692 D 402881 CDS YP_001413016.1 154252192 5455729 complement(1881142..1882524) 1 NC_009719.1 TIGRFAM: FAD-linked oxidoreductase; PFAM: FAD linked oxidase domain protein; D-arabinono-14-lactone oxidase; KEGG: cvi:CV1040 probable FAD-dependent oxidoreductase; FAD-linked oxidoreductase 1882524 5455729 Plav_1740 Parvibaculum lavamentivorans DS-1 FAD-linked oxidoreductase YP_001413016.1 1881142 R 402881 CDS YP_001413017.1 154252193 5455937 complement(1882521..1882892) 1 NC_009719.1 KEGG: pen:PSEEN3317 cytochrome c; cytochrome c 1882892 5455937 Plav_1741 Parvibaculum lavamentivorans DS-1 cytochrome c YP_001413017.1 1882521 R 402881 CDS YP_001413018.1 154252194 5453734 complement(1882904..1883665) 1 NC_009719.1 TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mes:Meso_3002 ubiquinone biosynthesis O-methyltransferase; ubiquinone biosynthesis O-methyltransferase 1883665 5453734 Plav_1742 Parvibaculum lavamentivorans DS-1 ubiquinone biosynthesis O-methyltransferase YP_001413018.1 1882904 R 402881 CDS YP_001413019.1 154252195 5454111 1883872..1885131 1 NC_009719.1 TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; KEGG: mlo:mll3437 aspartokinase, alpha and beta subunits; aspartate kinase 1885131 5454111 Plav_1743 Parvibaculum lavamentivorans DS-1 aspartate kinase YP_001413019.1 1883872 D 402881 CDS YP_001413020.1 154252196 5456195 1885188..1887455 1 NC_009719.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: rpd:RPD_0098 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase PtsP 1887455 5456195 Plav_1744 Parvibaculum lavamentivorans DS-1 phosphoenolpyruvate-protein phosphotransferase PtsP YP_001413020.1 1885188 D 402881 CDS YP_001413021.1 154252197 5453430 1887699..1888823 1 NC_009719.1 KEGG: mag:amb1615 hypothetical protein; hypothetical protein 1888823 5453430 Plav_1745 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413021.1 1887699 D 402881 CDS YP_001413022.1 154252198 5454872 1888993..1890144 1 NC_009719.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1890144 ispG 5454872 ispG Parvibaculum lavamentivorans DS-1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_001413022.1 1888993 D 402881 CDS YP_001413023.1 154252199 5455995 1890205..1891272 1 NC_009719.1 TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: sal:Sala_2714 peptide chain release factor 1; peptide chain release factor 1 1891272 5455995 Plav_1747 Parvibaculum lavamentivorans DS-1 peptide chain release factor 1 YP_001413023.1 1890205 D 402881 CDS YP_001413024.1 154252200 5456983 1891272..1892123 1 NC_009719.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: mag:amb1619 methylase of polypeptide chain release factor; HemK family modification methylase 1892123 5456983 Plav_1748 Parvibaculum lavamentivorans DS-1 HemK family modification methylase YP_001413024.1 1891272 D 402881 CDS YP_001413025.1 154252201 5456143 1892570..1893316 1 NC_009719.1 KEGG: bja:blr0220 hypothetical protein; hypothetical protein 1893316 5456143 Plav_1749 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413025.1 1892570 D 402881 CDS YP_001413026.1 154252202 5454079 complement(1893325..1894092) 1 NC_009719.1 PFAM: MOSC domain containing protein; KEGG: rpb:RPB_4248 MOSC; MOSC domain-containing protein 1894092 5454079 Plav_1750 Parvibaculum lavamentivorans DS-1 MOSC domain-containing protein YP_001413026.1 1893325 R 402881 CDS YP_001413027.1 154252203 5456587 1894299..1896941 1 NC_009719.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rpd:RPD_4095 ATPase AAA-2; ATPase 1896941 5456587 Plav_1751 Parvibaculum lavamentivorans DS-1 ATPase YP_001413027.1 1894299 D 402881 CDS YP_001413028.1 154252204 5455170 1897118..1897882 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: aha:AHA_1994 glucose 1-dehydrogenase; short chain dehydrogenase 1897882 5455170 Plav_1752 Parvibaculum lavamentivorans DS-1 short chain dehydrogenase YP_001413028.1 1897118 D 402881 CDS YP_001413029.1 154252205 5456441 1897921..1898205 1 NC_009719.1 hypothetical protein 1898205 5456441 Plav_1753 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413029.1 1897921 D 402881 CDS YP_001413030.1 154252206 5455894 complement(1898625..1900334) 1 NC_009719.1 PFAM: peptidase M23B; KEGG: rru:Rru_A0770 peptidase M23B; peptidase M23B 1900334 5455894 Plav_1754 Parvibaculum lavamentivorans DS-1 peptidase M23B YP_001413030.1 1898625 R 402881 CDS YP_001413031.1 154252207 5453907 complement(1906652..1908301) 1 NC_009719.1 PFAM: Resolvase domain; Recombinase; KEGG: pde:Pden_0106 recombinase; resolvase domain-containing protein 1908301 5453907 Plav_1755 Parvibaculum lavamentivorans DS-1 resolvase domain-containing protein YP_001413031.1 1906652 R 402881 CDS YP_001413032.1 154252208 5455802 1908382..1908756 1 NC_009719.1 hypothetical protein 1908756 5455802 Plav_1756 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413032.1 1908382 D 402881 CDS YP_001413033.1 154252209 5455246 1909331..1910506 1 NC_009719.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1910506 5455246 Plav_1757 Parvibaculum lavamentivorans DS-1 acetyl-CoA acetyltransferase YP_001413033.1 1909331 D 402881 CDS YP_001413034.1 154252210 5455787 1910503..1910895 1 NC_009719.1 PFAM: protein of unknown function DUF35; KEGG: reh:H16_A1296 hypothetical protein containing DUF35 domain; hypothetical protein 1910895 5455787 Plav_1758 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413034.1 1910503 D 402881 CDS YP_001413035.1 154252211 5455123 1911048..1912658 1 NC_009719.1 activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence; acyl-CoA synthetase 1912658 5455123 Plav_1759 Parvibaculum lavamentivorans DS-1 acyl-CoA synthetase YP_001413035.1 1911048 D 402881 CDS YP_001413036.1 154252212 5454485 1912715..1913467 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_2100 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1913467 5454485 Plav_1760 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001413036.1 1912715 D 402881 CDS YP_001413037.1 154252213 5455622 1913585..1914997 1 NC_009719.1 PFAM: ring hydroxylating dioxygenase alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: nar:Saro_3864 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 1914997 5455622 Plav_1761 Parvibaculum lavamentivorans DS-1 Rieske (2Fe-2S) domain-containing protein YP_001413037.1 1913585 D 402881 CDS YP_001413038.1 154252214 5456160 1914994..1915488 1 NC_009719.1 PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: nar:Saro_3863 aromatic-ring-hydroxylating dioxygenase, beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta 1915488 5456160 Plav_1762 Parvibaculum lavamentivorans DS-1 aromatic-ring-hydroxylating dioxygenase subunit beta YP_001413038.1 1914994 D 402881 CDS YP_001413039.1 154252215 5454936 1915501..1916490 1 NC_009719.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA; KEGG: nar:Saro_3862 pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 1916490 5454936 Plav_1763 Parvibaculum lavamentivorans DS-1 4-hydroxythreonine-4-phosphate dehydrogenase YP_001413039.1 1915501 D 402881 CDS YP_001413040.1 154252216 5455874 complement(1916508..1916975) 1 NC_009719.1 KEGG: bbr:BB0659 hypothetical protein; hypothetical protein 1916975 5455874 Plav_1764 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413040.1 1916508 R 402881 CDS YP_001413041.1 154252217 5456326 complement(1917064..1918329) 1 NC_009719.1 PFAM: cytochrome P450; KEGG: cytochrome P450 family protein; cytochrome P450 1918329 5456326 Plav_1765 Parvibaculum lavamentivorans DS-1 cytochrome P450 YP_001413041.1 1917064 R 402881 CDS YP_001413042.1 154252218 5453857 complement(1918539..1920179) 1 NC_009719.1 AliA; in Rhodopseudomonas palustris, this enzyme was found to act on 3-chlorobenzoate and allows the organism to grow on this substrate; cyclohexanecarboxylate-CoA ligase 1920179 5453857 Plav_1766 Parvibaculum lavamentivorans DS-1 cyclohexanecarboxylate-CoA ligase YP_001413042.1 1918539 R 402881 CDS YP_001413043.1 154252219 5455564 complement(1920220..1921080) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_5297 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1921080 5455564 Plav_1767 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001413043.1 1920220 R 402881 CDS YP_001413044.1 154252220 5457041 complement(1921106..1921741) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: pol:Bpro_5293 transcriptional regulator, TetR family; TetR family transcriptional regulator 1921741 5457041 Plav_1768 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001413044.1 1921106 R 402881 CDS YP_001413045.1 154252221 5456694 1921911..1922672 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: eba:ebA1956 putative 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; short-chain dehydrogenase/reductase SDR 1922672 5456694 Plav_1769 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001413045.1 1921911 D 402881 CDS YP_001413046.1 154252222 5456362 1922684..1923475 1 NC_009719.1 TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reu:Reut_B3916 naphthoate synthase; naphthoate synthase 1923475 5456362 Plav_1770 Parvibaculum lavamentivorans DS-1 naphthoate synthase YP_001413046.1 1922684 D 402881 CDS YP_001413047.1 154252223 5455464 1923484..1924641 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: eba:ebA1959 cyclohexanecarboxyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1924641 5455464 Plav_1771 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001413047.1 1923484 D 402881 CDS YP_001413048.1 154252224 5456513 1924634..1925440 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pol:Bpro_5272 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1925440 5456513 Plav_1772 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001413048.1 1924634 D 402881 CDS YP_001413049.1 154252225 5454289 1925478..1926629 1 NC_009719.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bam:Bamb_6236 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 1926629 5454289 Plav_1773 Parvibaculum lavamentivorans DS-1 Rieske (2Fe-2S) domain-containing protein YP_001413049.1 1925478 D 402881 CDS YP_001413050.1 154252226 5453690 1926658..1927773 1 NC_009719.1 PFAM: luciferase family protein; KEGG: bxe:Bxe_C0953 putative luciferase-like monooxygenase; alkanal monooxygenase 1927773 5453690 Plav_1774 Parvibaculum lavamentivorans DS-1 alkanal monooxygenase YP_001413050.1 1926658 D 402881 CDS YP_001413051.1 154252227 5454087 complement(1929157..1929897) 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: hne:HNE_0937 enoyl-CoA hydratase/isomerase family protein; enoyl-CoA hydratase/isomerase 1929897 5454087 Plav_1776 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001413051.1 1929157 R 402881 CDS YP_001413052.1 154252228 5456242 complement(1929990..1930865) 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: mav:MAV_1846 hydrolase, alpha/beta fold family protein; alpha/beta hydrolase fold protein 1930865 5456242 Plav_1777 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001413052.1 1929990 R 402881 CDS YP_001413053.1 154252229 5457020 1931036..1931839 1 NC_009719.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: eli:ELI_14950 regulatory protein GntR, HTH; GntR family transcriptional regulator 1931839 5457020 Plav_1778 Parvibaculum lavamentivorans DS-1 GntR family transcriptional regulator YP_001413053.1 1931036 D 402881 CDS YP_001413054.1 154252230 5454280 1931955..1933088 1 NC_009719.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: eli:ELI_14955 oxidoreductase, 2-nitropropane dioxygenase family protein; 2-nitropropane dioxygenase 1933088 5454280 Plav_1779 Parvibaculum lavamentivorans DS-1 2-nitropropane dioxygenase YP_001413054.1 1931955 D 402881 CDS YP_001413055.1 154252231 5455719 1933137..1933583 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: mjl:Mjls_3233 uncharacterized domain 1; thioesterase superfamily protein 1933583 5455719 Plav_1780 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001413055.1 1933137 D 402881 CDS YP_001413056.1 154252232 5454066 1933709..1935343 1 NC_009719.1 KEGG: rha:RHA1_ro06698 cyclohexanone monooxygenase; cyclohexanone monooxygenase 1935343 5454066 Plav_1781 Parvibaculum lavamentivorans DS-1 cyclohexanone monooxygenase YP_001413056.1 1933709 D 402881 CDS YP_001413057.1 154252233 5454641 1935500..1936753 1 NC_009719.1 PFAM: cytochrome P450; KEGG: eli:ELI_14945 cytochrome P450 family protein; cytochrome P450 1936753 5454641 Plav_1782 Parvibaculum lavamentivorans DS-1 cytochrome P450 YP_001413057.1 1935500 D 402881 CDS YP_001413058.1 154252234 5456197 1936860..1937186 1 NC_009719.1 PFAM: ferredoxin; KEGG: eli:ELI_14940 ferredoxin, 2Fe-2S; ferredoxin 1937186 5456197 Plav_1783 Parvibaculum lavamentivorans DS-1 ferredoxin YP_001413058.1 1936860 D 402881 CDS YP_001413059.1 154252235 5454132 complement(1937416..1938144) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: bch:Bcen2424_0178 transcriptional regulator, TetR family; TetR family transcriptional regulator 1938144 5454132 Plav_1784 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001413059.1 1937416 R 402881 CDS YP_001413060.1 154252236 5453908 1938415..1939896 1 NC_009719.1 PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: gtn:GTNG_3160 putative aromatic compound hydroxylase; 4-hydroxyphenylacetate 3-hydroxylase 1939896 5453908 Plav_1785 Parvibaculum lavamentivorans DS-1 4-hydroxyphenylacetate 3-hydroxylase YP_001413060.1 1938415 D 402881 CDS YP_001413061.1 154252237 5454196 1939896..1941356 1 NC_009719.1 PFAM: aldehyde dehydrogenase; KEGG: ace:Acel_1100 betaine-aldehyde dehydrogenase; aldehyde dehydrogenase 1941356 5454196 Plav_1786 Parvibaculum lavamentivorans DS-1 aldehyde dehydrogenase YP_001413061.1 1939896 D 402881 CDS YP_001413062.1 154252238 5454546 1941369..1942271 1 NC_009719.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nar:Saro_3865 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1942271 5454546 Plav_1787 Parvibaculum lavamentivorans DS-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001413062.1 1941369 D 402881 CDS YP_001413063.1 154252239 5455546 1942319..1943152 1 NC_009719.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: nar:Saro_2598 5-carboxymethyl-2-hydroxymuconate delta-isomerase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 1943152 5455546 Plav_1788 Parvibaculum lavamentivorans DS-1 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_001413063.1 1942319 D 402881 CDS YP_001413064.1 154252240 5453565 1943164..1943946 1 NC_009719.1 PFAM: HpcH/HpaI aldolase; KEGG: sen:SACE_0699 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; HpcH/HpaI aldolase 1943946 5453565 Plav_1789 Parvibaculum lavamentivorans DS-1 HpcH/HpaI aldolase YP_001413064.1 1943164 D 402881 CDS YP_001413065.1 154252241 5457002 1943936..1944727 1 NC_009719.1 PFAM: Hydratase/decarboxylase; KEGG: aau:AAur_3913 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; 4-oxalocrotonate decarboxylase 1944727 5457002 Plav_1790 Parvibaculum lavamentivorans DS-1 4-oxalocrotonate decarboxylase YP_001413065.1 1943936 D 402881 CDS YP_001413066.1 154252242 5456672 1944823..1945278 1 NC_009719.1 KEGG: rha:RHA1_ro10221 hypothetical protein; hypothetical protein 1945278 5456672 Plav_1791 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413066.1 1944823 D 402881 CDS YP_001413067.1 154252243 5455821 1945392..1947083 1 NC_009719.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mtf:TBFG_13570 hypothetical dehydrogenase; 3-oxosteroid 1-dehydrogenase 1947083 5455821 Plav_1792 Parvibaculum lavamentivorans DS-1 3-oxosteroid 1-dehydrogenase YP_001413067.1 1945392 D 402881 CDS YP_001413068.1 154252244 5454181 complement(1947473..1948561) 1 NC_009719.1 PFAM: luciferase family protein; KEGG: swi:Swit_4156 alkanal monooxygenase (FMN-linked); alkanal monooxygenase 1948561 5454181 Plav_1793 Parvibaculum lavamentivorans DS-1 alkanal monooxygenase YP_001413068.1 1947473 R 402881 CDS YP_001413069.1 154252245 5454683 complement(1948601..1949413) 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro04688 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 1949413 5454683 Plav_1794 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001413069.1 1948601 R 402881 CDS YP_001413070.1 154252246 5455169 1949570..1950673 1 NC_009719.1 PFAM: amidohydrolase 2; KEGG: swi:Swit_1767 amidohydrolase 2; amidohydrolase 2 1950673 5455169 Plav_1795 Parvibaculum lavamentivorans DS-1 amidohydrolase 2 YP_001413070.1 1949570 D 402881 CDS YP_001413071.1 154252247 5456837 1950732..1952414 1 NC_009719.1 PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: swi:Swit_2091 amidohydrolase 3; D-aminoacylase domain-containing protein 1952414 5456837 Plav_1796 Parvibaculum lavamentivorans DS-1 D-aminoacylase domain-containing protein YP_001413071.1 1950732 D 402881 CDS YP_001413072.1 154252248 5453879 1952429..1953322 1 NC_009719.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: acr:Acry_0629 alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase domain-containing protein 1953322 5453879 Plav_1797 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase domain-containing protein YP_001413072.1 1952429 D 402881 CDS YP_001413073.1 154252249 5455842 complement(1953323..1954162) 1 NC_009719.1 PFAM: regulatory protein IclR; KEGG: bpe:BP0674 probable transcriptional regulator; regulatory protein IclR 1954162 5455842 Plav_1798 Parvibaculum lavamentivorans DS-1 regulatory protein IclR YP_001413073.1 1953323 R 402881 CDS YP_001413074.1 154252250 5454094 complement(1954217..1956262) 1 NC_009719.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: eba:ebA5836 2,4-dienoyl-CoA reductase; NADH:flavin oxidoreductase 1956262 5454094 Plav_1799 Parvibaculum lavamentivorans DS-1 NADH:flavin oxidoreductase YP_001413074.1 1954217 R 402881 CDS YP_001413075.1 154252251 5456937 complement(1956282..1957130) 1 NC_009719.1 PFAM: MaoC domain protein dehydratase; KEGG: ptr:462019 hydroxysteroid (17-beta) dehydrogenase 4; 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase 1957130 5456937 Plav_1800 Parvibaculum lavamentivorans DS-1 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase YP_001413075.1 1956282 R 402881 CDS YP_001413076.1 154252252 5454304 complement(1957185..1957754) 1 NC_009719.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mgi:Mflv_4627 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 1957754 5454304 Plav_1801 Parvibaculum lavamentivorans DS-1 carboxymuconolactone decarboxylase YP_001413076.1 1957185 R 402881 CDS YP_001413077.1 154252253 5453343 1957904..1958998 1 NC_009719.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bbr:BB0552 putative zinc-binding dehydrogenase; alcohol dehydrogenase 1958998 5453343 Plav_1802 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001413077.1 1957904 D 402881 CDS YP_001413078.1 154252254 5455130 1959086..1960255 1 NC_009719.1 KEGG: eli:ELI_14965 putative nonspecific lipid-transfer protein; putative nonspecific lipid-transfer protein 1960255 5455130 Plav_1803 Parvibaculum lavamentivorans DS-1 putative nonspecific lipid-transfer protein YP_001413078.1 1959086 D 402881 CDS YP_001413079.1 154252255 5453921 1960258..1960680 1 NC_009719.1 PFAM: protein of unknown function DUF35; KEGG: eli:ELI_14970 hypothetical protein; hypothetical protein 1960680 5453921 Plav_1804 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413079.1 1960258 D 402881 CDS YP_001413080.1 154252256 5454540 1960720..1961913 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: eli:ELI_14975 putative acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein 1961913 5454540 Plav_1805 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001413080.1 1960720 D 402881 CDS YP_001413081.1 154252257 5455686 1961925..1963010 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: eli:ELI_14980 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1963010 5455686 Plav_1806 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001413081.1 1961925 D 402881 CDS YP_001413082.1 154252258 5455416 1963244..1964443 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: sal:Sala_1104 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 1964443 5455416 Plav_1807 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001413082.1 1963244 D 402881 CDS YP_001413083.1 154252259 5454067 1964851..1965213 1 NC_009719.1 KEGG: bvi:Bcep1808_4948 biopolymer transport protein ExbD/TolR; biopolymer transport protein-like protein 1965213 5454067 Plav_1809 Parvibaculum lavamentivorans DS-1 biopolymer transport protein-like protein YP_001413083.1 1964851 D 402881 CDS YP_001413084.1 154252260 5453967 1965252..1966037 1 NC_009719.1 KEGG: mlo:mlr6104 hypothetical protein; hypothetical protein 1966037 5453967 Plav_1810 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413084.1 1965252 D 402881 CDS YP_001413085.1 154252261 5457039 complement(1966044..1966319) 1 NC_009719.1 KEGG: bbt:BBta_7428 hypothetical protein; hypothetical protein 1966319 5457039 Plav_1811 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413085.1 1966044 R 402881 CDS YP_001413086.1 154252262 5454052 1966406..1966624 1 NC_009719.1 PFAM: helix-turn-helix domain protein; KEGG: rpe:RPE_4037 transcriptional regulator, XRE family; XRE family transcriptional regulator 1966624 5454052 Plav_1812 Parvibaculum lavamentivorans DS-1 XRE family transcriptional regulator YP_001413086.1 1966406 D 402881 CDS YP_001413087.1 154252263 5453490 1966772..1967014 1 NC_009719.1 PFAM: helix-turn-helix domain protein; KEGG: rpc:RPC_3550 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein 1967014 5453490 Plav_1813 Parvibaculum lavamentivorans DS-1 helix-turn-helix domain-containing protein YP_001413087.1 1966772 D 402881 CDS YP_001413088.1 154252264 5455936 1967251..1968186 1 NC_009719.1 PFAM: domain of unknown function DUF1738; KEGG: mlo:mlr6154 antirestriction protein; hypothetical protein 1968186 5455936 Plav_1814 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413088.1 1967251 D 402881 CDS YP_001413089.1 154252265 5454989 1968393..1968911 1 NC_009719.1 hypothetical protein 1968911 5454989 Plav_1815 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413089.1 1968393 D 402881 CDS YP_001413090.1 154252266 5455322 1968883..1970613 1 NC_009719.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: mlo:mlr6157 similar to partitioning protein; parB-like partition protein 1970613 5455322 Plav_1816 Parvibaculum lavamentivorans DS-1 parB-like partition protein YP_001413090.1 1968883 D 402881 CDS YP_001413091.1 154252267 5454290 1971254..1971577 1 NC_009719.1 PFAM: protein of unknown function DUF736; KEGG: mlo:mlr6185 hypothetical protein; hypothetical protein 1971577 5454290 Plav_1817 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413091.1 1971254 D 402881 CDS YP_001413092.1 154252268 5455059 1971702..1971986 1 NC_009719.1 KEGG: mlo:msr6186 hypothetical protein; hypothetical protein 1971986 5455059 Plav_1818 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413092.1 1971702 D 402881 CDS YP_001413093.1 154252269 5456864 1971979..1972557 1 NC_009719.1 KEGG: mlo:mlr6188 plasmid transfer protein TraF; plasmid transfer protein TraF 1972557 5456864 Plav_1819 Parvibaculum lavamentivorans DS-1 plasmid transfer protein TraF YP_001413093.1 1971979 D 402881 CDS YP_001413094.1 154252270 5456794 1972545..1973300 1 NC_009719.1 PFAM: Lytic transglycosylase catalytic; KEGG: mlo:mlr6189 similar to transglycosylase; lytic transglycosylase catalytic subunit 1973300 5456794 Plav_1820 Parvibaculum lavamentivorans DS-1 lytic transglycosylase catalytic subunit YP_001413094.1 1972545 D 402881 CDS YP_001413095.1 154252271 5456708 1973557..1975542 1 NC_009719.1 KEGG: mlo:mlr6191 hypothetical protein; hypothetical protein 1975542 5456708 Plav_1821 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413095.1 1973557 D 402881 CDS YP_001413096.1 154252272 5457007 complement(1975746..1977152) 1 NC_009719.1 PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: rpe:RPE_2473 exodeoxyribonuclease I; exodeoxyribonuclease I 1977152 5457007 Plav_1822 Parvibaculum lavamentivorans DS-1 exodeoxyribonuclease I YP_001413096.1 1975746 R 402881 CDS YP_001413097.1 154252273 5457045 complement(1977168..1977689) 1 NC_009719.1 PFAM: protein of unknown function DUF955; KEGG: rpe:RPE_2472 protein of unknown function DUF955; hypothetical protein 1977689 5457045 Plav_1823 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413097.1 1977168 R 402881 CDS YP_001413098.1 154252274 5455687 complement(1977686..1978039) 1 NC_009719.1 PFAM: helix-turn-helix domain protein; KEGG: rpe:RPE_2471 transcriptional regulator, XRE family; XRE family transcriptional regulator 1978039 5455687 Plav_1824 Parvibaculum lavamentivorans DS-1 XRE family transcriptional regulator YP_001413098.1 1977686 R 402881 CDS YP_001413099.1 154252275 5454880 1978202..1978423 1 NC_009719.1 KEGG: rpe:RPE_2470 hypothetical protein; hypothetical protein 1978423 5454880 Plav_1825 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413099.1 1978202 D 402881 CDS YP_001413100.1 154252276 5455537 1978510..1979433 1 NC_009719.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rpe:RPE_2469 AAA ATPase, central domain protein; ATPase central domain-containing protein 1979433 5455537 Plav_1826 Parvibaculum lavamentivorans DS-1 ATPase central domain-containing protein YP_001413100.1 1978510 D 402881 CDS YP_001413101.1 154252277 5454785 1979430..1979906 1 NC_009719.1 KEGG: rpe:RPE_2468 hypothetical protein; hypothetical protein 1979906 5454785 Plav_1827 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413101.1 1979430 D 402881 CDS YP_001413102.1 154252278 5455503 1979903..1980403 1 NC_009719.1 KEGG: rpe:RPE_2467 hypothetical protein; hypothetical protein 1980403 5455503 Plav_1828 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413102.1 1979903 D 402881 CDS YP_001413103.1 154252279 5455445 1980403..1981299 1 NC_009719.1 KEGG: rpe:RPE_2466 hypothetical protein; hypothetical protein 1981299 5455445 Plav_1829 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413103.1 1980403 D 402881 CDS YP_001413104.1 154252280 5455161 1981331..1982056 1 NC_009719.1 KEGG: ajs:Ajs_1271 hypothetical protein; hypothetical protein 1982056 5455161 Plav_1830 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413104.1 1981331 D 402881 CDS YP_001413105.1 154252281 5454795 1982131..1983429 1 NC_009719.1 KEGG: bbt:BBta_7549 hypothetical protein; hypothetical protein 1983429 5454795 Plav_1831 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413105.1 1982131 D 402881 CDS YP_001413106.1 154252282 5454685 complement(1983532..1983978) 1 NC_009719.1 KEGG: bbt:BBta_7418 putative membrane protein of unknown function; hypothetical protein 1983978 5454685 Plav_1832 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413106.1 1983532 R 402881 CDS YP_001413107.1 154252283 5453561 1984249..1986312 1 NC_009719.1 type IV secretion VirD4 coupling protein family; conjugal transfer coupling protein TraG 1986312 5453561 Plav_1833 Parvibaculum lavamentivorans DS-1 conjugal transfer coupling protein TraG YP_001413107.1 1984249 D 402881 CDS YP_001413108.1 154252284 5455153 1986324..1986743 1 NC_009719.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: rme:Rmet_1549 CopG-like DNA-binding; CopG/DNA-binding domain-containing protein 1986743 5455153 Plav_1834 Parvibaculum lavamentivorans DS-1 CopG/DNA-binding domain-containing protein YP_001413108.1 1986324 D 402881 CDS YP_001413109.1 154252285 5453499 1986740..1987717 1 NC_009719.1 TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: mlo:mlr6397 conjugal transfer protein traB; P-type conjugative transfer ATPase TrbB 1987717 5453499 Plav_1835 Parvibaculum lavamentivorans DS-1 P-type conjugative transfer ATPase TrbB YP_001413109.1 1986740 D 402881 CDS YP_001413110.1 154252286 5454193 1987735..1988058 1 NC_009719.1 PFAM: Conjugal transfer protein TrbC; KEGG: pde:Pden_3195 conjugal transfer protein TrbC; conjugal transfer protein TrbC 1988058 5454193 Plav_1836 Parvibaculum lavamentivorans DS-1 conjugal transfer protein TrbC YP_001413110.1 1987735 D 402881 CDS YP_001413111.1 154252287 5454319 1988055..1988318 1 NC_009719.1 KEGG: aav:Aave_0728 putative conjugal transfer TrbD transmembrane protein; putative conjugal transfer TrbD transmembrane protein 1988318 5454319 Plav_1837 Parvibaculum lavamentivorans DS-1 putative conjugal transfer TrbD transmembrane protein YP_001413111.1 1988055 D 402881 CDS YP_001413112.1 154252288 5455305 1988312..1990738 1 NC_009719.1 type IV secretion system VirB4 family; conjugal transfer ATPase TrbE 1990738 5455305 Plav_1838 Parvibaculum lavamentivorans DS-1 conjugal transfer ATPase TrbE YP_001413112.1 1988312 D 402881 CDS YP_001413113.1 154252289 5456078 1990753..1991478 1 NC_009719.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: mlo:mlr6401 conjugal transfer protein TrbJ; conjugal transfer protein TrbJ 1991478 5456078 Plav_1839 Parvibaculum lavamentivorans DS-1 conjugal transfer protein TrbJ YP_001413113.1 1990753 D 402881 CDS YP_001413114.1 154252290 5453622 1991511..1992674 1 NC_009719.1 type IV secretion VirB6 family; conjugal transfer protein TrbL 1992674 5453622 Plav_1840 Parvibaculum lavamentivorans DS-1 conjugal transfer protein TrbL YP_001413114.1 1991511 D 402881 CDS YP_001413115.1 154252291 5454841 1992674..1993372 1 NC_009719.1 PFAM: Conjugal transfer protein; KEGG: mlo:mlr6403 conjugal transfer protein trbF; conjugal transfer protein TrbF 1993372 5454841 Plav_1841 Parvibaculum lavamentivorans DS-1 conjugal transfer protein TrbF YP_001413115.1 1992674 D 402881 CDS YP_001413116.1 154252292 5454808 1993387..1994406 1 NC_009719.1 TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: mlo:mlr6404 conjugal transfer protein trbG; P-type conjugative transfer protein TrbG 1994406 5454808 Plav_1842 Parvibaculum lavamentivorans DS-1 P-type conjugative transfer protein TrbG YP_001413116.1 1993387 D 402881 CDS YP_001413117.1 154252293 5454361 1994416..1995711 1 NC_009719.1 PFAM: Ubiquitin interacting domain protein; conjugation TrbI family protein; KEGG: mlo:mlr6405 conjugal transfer protein trbI; conjugation TrbI family protein 1995711 5454361 Plav_1843 Parvibaculum lavamentivorans DS-1 conjugation TrbI family protein YP_001413117.1 1994416 D 402881 CDS YP_001413118.1 154252294 5455882 1995717..1996025 1 NC_009719.1 KEGG: mlo:msr6406 hypothetical protein; hypothetical protein 1996025 5455882 Plav_1844 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413118.1 1995717 D 402881 CDS YP_001413119.1 154252295 5453989 1996027..1996338 1 NC_009719.1 PFAM: protein of unknown function DUF736; KEGG: hypothetical protein; hypothetical protein 1996338 5453989 Plav_1845 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413119.1 1996027 D 402881 CDS YP_001413120.1 154252296 5455413 1996883..1997536 1 NC_009719.1 KEGG: nha:Nham_4291 hypothetical protein; hypothetical protein 1997536 5455413 Plav_1846 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413120.1 1996883 D 402881 CDS YP_001413121.1 154252297 5455365 1997533..1998618 1 NC_009719.1 PFAM: Domain of unknown function DUF1814; KEGG: nha:Nham_4292 hypothetical protein; hypothetical protein 1998618 5455365 Plav_1847 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413121.1 1997533 D 402881 CDS YP_001413122.1 154252298 5454714 1998611..2002549 1 NC_009719.1 hypothetical protein 2002549 5454714 Plav_1848 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413122.1 1998611 D 402881 CDS YP_001413123.1 154252299 5454488 2002536..2006915 1 NC_009719.1 KEGG: pfl:PFL_2817 hypothetical protein; hypothetical protein 2006915 5454488 Plav_1849 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413123.1 2002536 D 402881 CDS YP_001413124.1 154252300 5455710 2007271..2010111 1 NC_009719.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; MHYT domain protein; Hpt domain protein; KEGG: mag:amb3438 sensor protein GacS; multi-sensor hybrid histidine kinase 2010111 5455710 Plav_1850 Parvibaculum lavamentivorans DS-1 multi-sensor hybrid histidine kinase YP_001413124.1 2007271 D 402881 CDS YP_001413125.1 154252301 5454413 complement(2010483..2011535) 1 NC_009719.1 PFAM: regulatory protein MarR; KEGG: sal:Sala_2099 hypothetical protein; MarR family transcriptional regulator 2011535 5454413 Plav_1851 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001413125.1 2010483 R 402881 CDS YP_001413126.1 154252302 5453633 2011792..2012415 1 NC_009719.1 PFAM: class II aldolase/adducin family protein; KEGG: xcb:XC_2369 putative L-fuculose-phosphate aldolase; class II aldolase/adducin family protein 2012415 5453633 Plav_1852 Parvibaculum lavamentivorans DS-1 class II aldolase/adducin family protein YP_001413126.1 2011792 D 402881 CDS YP_001413127.1 154252303 5456069 2012412..2012966 1 NC_009719.1 PFAM: Acireductone dioxygenase ARD; KEGG: xcv:XCV1885 acireductone dioxygenase family protein; acireductone dioxygenase ARD 2012966 5456069 Plav_1853 Parvibaculum lavamentivorans DS-1 acireductone dioxygenase ARD YP_001413127.1 2012412 D 402881 CDS YP_001413128.1 154252304 5455932 2012963..2013670 1 NC_009719.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mca:MCA0797 hydrolase, haloacid dehalogenase-like family; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2013670 5455932 Plav_1854 Parvibaculum lavamentivorans DS-1 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_001413128.1 2012963 D 402881 CDS YP_001413129.1 154252305 5453728 complement(2013727..2013957) 1 NC_009719.1 KEGG: acr:Acry_0749 hypothetical protein; hypothetical protein 2013957 5453728 Plav_1855 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413129.1 2013727 R 402881 CDS YP_001413130.1 154252306 5455472 2014109..2014840 1 NC_009719.1 TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: rru:Rru_A0027 monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase 2014840 5455472 Plav_1856 Parvibaculum lavamentivorans DS-1 monofunctional biosynthetic peptidoglycan transglycosylase YP_001413130.1 2014109 D 402881 CDS YP_001413131.1 154252307 5454194 2015119..2015421 1 NC_009719.1 hypothetical protein 2015421 5454194 Plav_1857 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413131.1 2015119 D 402881 CDS YP_001413132.1 154252308 5456100 complement(2015643..2017184) 1 NC_009719.1 PFAM: FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: swi:Swit_2390 GMC oxidoreductase; FAD dependent oxidoreductase 2017184 5456100 Plav_1858 Parvibaculum lavamentivorans DS-1 FAD dependent oxidoreductase YP_001413132.1 2015643 R 402881 CDS YP_001413133.1 154252309 5454990 2017483..2018910 1 NC_009719.1 PFAM: aldehyde dehydrogenase; KEGG: hne:HNE_3109 aldehyde dehydrogenase family protein; aldehyde dehydrogenase 2018910 5454990 Plav_1859 Parvibaculum lavamentivorans DS-1 aldehyde dehydrogenase YP_001413133.1 2017483 D 402881 CDS YP_001413134.1 154252310 5453922 2019071..2020381 1 NC_009719.1 KEGG: rle:RL1940 hypothetical protein; hypothetical protein 2020381 5453922 Plav_1860 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413134.1 2019071 D 402881 CDS YP_001413135.1 154252311 5455876 2020735..2021031 1 NC_009719.1 hypothetical protein 2021031 5455876 Plav_1861 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413135.1 2020735 D 402881 CDS YP_001413136.1 154252312 5455469 complement(2021269..2022591) 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: vei:Veis_4967 major facilitator superfamily MFS_1; major facilitator superfamily transporter 2022591 5455469 Plav_1862 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001413136.1 2021269 R 402881 CDS YP_001413137.1 154252313 5453350 complement(2022724..2023563) 1 NC_009719.1 PFAM: protein of unknown function DUF519; KEGG: mag:amb0584 protein involved in catabolism of external DNA; hypothetical protein 2023563 5453350 Plav_1863 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413137.1 2022724 R 402881 CDS YP_001413138.1 154252314 5455402 complement(2023571..2024362) 1 NC_009719.1 PFAM: protein of unknown function DUF344; KEGG: bvi:Bcep1808_7286 protein of unknown function DUF344; hypothetical protein 2024362 5455402 Plav_1864 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413138.1 2023571 R 402881 CDS YP_001413139.1 154252315 5455734 2024507..2026624 1 NC_009719.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nwi:Nwi_3051 TonB-dependent receptor; TonB-dependent receptor 2026624 5455734 Plav_1865 Parvibaculum lavamentivorans DS-1 TonB-dependent receptor YP_001413139.1 2024507 D 402881 CDS YP_001413140.1 154252316 5453626 complement(2027415..2028095) 1 NC_009719.1 TIGRFAM: anti-sigma factor, putative, ChrR family; KEGG: rpd:RPD_0339 anti-sigma factor ChrR , putative; anti-ECF sigma factor ChrR 2028095 5453626 Plav_1867 Parvibaculum lavamentivorans DS-1 anti-ECF sigma factor ChrR YP_001413140.1 2027415 R 402881 CDS YP_001413141.1 154252317 5453534 complement(2028092..2028760) 1 NC_009719.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 2028760 5453534 Plav_1868 Parvibaculum lavamentivorans DS-1 RNA polymerase sigma factor RpoE YP_001413141.1 2028092 R 402881 CDS YP_001413142.1 154252318 5453703 2028935..2030323 1 NC_009719.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rle:pRL120576 putative amine oxidase; amine oxidase 2030323 5453703 Plav_1869 Parvibaculum lavamentivorans DS-1 amine oxidase YP_001413142.1 2028935 D 402881 CDS YP_001413143.1 154252319 5455984 2030320..2031126 1 NC_009719.1 PFAM: protein of unknown function DUF1365; KEGG: rru:Rru_A0724 protein of unknown function DUF1365; hypothetical protein 2031126 5455984 Plav_1870 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413143.1 2030320 D 402881 CDS YP_001413144.1 154252320 5454147 2031275..2033440 1 NC_009719.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: mag:amb1214 predicted signal transduction protein; diguanylate cyclase/phosphodiesterase 2033440 5454147 Plav_1871 Parvibaculum lavamentivorans DS-1 diguanylate cyclase/phosphodiesterase YP_001413144.1 2031275 D 402881 CDS YP_001413145.1 154252321 5455662 2033594..2034787 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: eli:ELI_14975 putative acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein 2034787 5455662 Plav_1872 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001413145.1 2033594 D 402881 CDS YP_001413146.1 154252322 5454316 2034799..2035893 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: eli:ELI_14980 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 2035893 5454316 Plav_1873 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001413146.1 2034799 D 402881 CDS YP_001413147.1 154252323 5453678 2036049..2036306 1 NC_009719.1 TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: swi:Swit_5118 addiction module antitoxin, RelB/DinJ family; addiction module antitoxin 2036306 5453678 Plav_1874 Parvibaculum lavamentivorans DS-1 addiction module antitoxin YP_001413147.1 2036049 D 402881 CDS YP_001413148.1 154252324 5454248 2036614..2036934 1 NC_009719.1 PFAM: MtN3 and saliva related transmembrane protein; KEGG: sde:Sde_3602 glutathione synthetase; MtN3 and saliva related transmembrane protein 2036934 5454248 Plav_1876 Parvibaculum lavamentivorans DS-1 MtN3 and saliva related transmembrane protein YP_001413148.1 2036614 D 402881 CDS YP_001413149.1 154252325 5455031 2037024..2038118 1 NC_009719.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bja:blr2812 hypothetical zinc-type alcohol dehydrogenase-like protein; alcohol dehydrogenase 2038118 5455031 Plav_1877 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001413149.1 2037024 D 402881 CDS YP_001413150.1 154252326 5454390 complement(2038209..2038811) 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: mgm:Mmc1_3681 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 2038811 5454390 Plav_1878 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001413150.1 2038209 R 402881 CDS YP_001413151.1 154252327 5454535 complement(2038837..2039328) 1 NC_009719.1 KEGG: noc:Noc_2584 Rickettsia 17 kDa surface antigen; hypothetical protein 2039328 5454535 Plav_1879 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413151.1 2038837 R 402881 CDS YP_001413152.1 154252328 5455337 complement(2039331..2039840) 1 NC_009719.1 hypothetical protein 2039840 5455337 Plav_1880 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413152.1 2039331 R 402881 CDS YP_001413153.1 154252329 5455641 complement(2039850..2040185) 1 NC_009719.1 hypothetical protein 2040185 5455641 Plav_1881 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413153.1 2039850 R 402881 CDS YP_001413154.1 154252330 5455965 complement(2040228..2041676) 1 NC_009719.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: mxa:MXAN_0537 putative cardiolipin synthase; phospholipase D/transphosphatidylase 2041676 5455965 Plav_1882 Parvibaculum lavamentivorans DS-1 phospholipase D/transphosphatidylase YP_001413154.1 2040228 R 402881 CDS YP_001413155.1 154252331 5453491 complement(2041728..2043836) 1 NC_009719.1 PFAM: TonB-dependent receptor; KEGG: mmr:Mmar10_1609 TonB-dependent receptor; TonB-dependent receptor 2043836 5453491 Plav_1883 Parvibaculum lavamentivorans DS-1 TonB-dependent receptor YP_001413155.1 2041728 R 402881 CDS YP_001413156.1 154252332 5456681 2044054..2044704 1 NC_009719.1 PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: bms:BR0471 cytochrome c oxidase assembly protein Ctag; cytochrome c oxidase assembly protein CtaG/Cox11 2044704 5456681 Plav_1884 Parvibaculum lavamentivorans DS-1 cytochrome c oxidase assembly protein CtaG/Cox11 YP_001413156.1 2044054 D 402881 CDS YP_001413157.1 154252333 5454500 2044783..2045523 1 NC_009719.1 PFAM: Rhomboid family protein; KEGG: rru:Rru_A3565 rhomboid-like protein; rhomboid family protein 2045523 5454500 Plav_1885 Parvibaculum lavamentivorans DS-1 rhomboid family protein YP_001413157.1 2044783 D 402881 CDS YP_001413158.1 154252334 5456615 complement(2045520..2046668) 1 NC_009719.1 PFAM: Aldose 1-epimerase; KEGG: bur:Bcep18194_A3707 aldose 1-epimerase; aldose 1-epimerase 2046668 5456615 Plav_1886 Parvibaculum lavamentivorans DS-1 aldose 1-epimerase YP_001413158.1 2045520 R 402881 CDS YP_001413159.1 154252335 5455101 2046784..2047863 1 NC_009719.1 KEGG: rle:pRL90288 putative transport protein; putative transport protein 2047863 5455101 Plav_1887 Parvibaculum lavamentivorans DS-1 putative transport protein YP_001413159.1 2046784 D 402881 CDS YP_001413160.1 154252336 5454076 2047894..2048715 1 NC_009719.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpd:RPD_2184 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2048715 5454076 Plav_1888 Parvibaculum lavamentivorans DS-1 binding-protein-dependent transport system inner membrane protein YP_001413160.1 2047894 D 402881 CDS YP_001413161.1 154252337 5454811 2048712..2049485 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gbe:GbCGDNIH1_1748 ABC transporter ATP-binding protein; ABC transporter-like protein 2049485 5454811 Plav_1889 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001413161.1 2048712 D 402881 CDS YP_001413162.1 154252338 5454635 2049580..2050416 1 NC_009719.1 KEGG: rpe:RPE_1217 hypothetical protein; hypothetical protein 2050416 5454635 Plav_1890 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413162.1 2049580 D 402881 CDS YP_001413163.1 154252339 5453379 2050416..2051051 1 NC_009719.1 KEGG: rle:pRL90292 hypothetical protein; hypothetical protein 2051051 5453379 Plav_1891 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413163.1 2050416 D 402881 CDS YP_001413164.1 154252340 5454387 2051085..2054702 1 NC_009719.1 TIGRFAM: urea amidolyase related protein; Urea carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: gbe:GbCGDNIH1_1745 UreA carboxylase; Urea carboxylase 2054702 5454387 Plav_1892 Parvibaculum lavamentivorans DS-1 Urea carboxylase YP_001413164.1 2051085 D 402881 CDS YP_001413165.1 154252341 5455412 2054699..2056489 1 NC_009719.1 TIGRFAM: Allophanate hydrolase; PFAM: Amidase; KEGG: nmu:Nmul_A0944 amidase; allophanate hydrolase 2056489 5455412 Plav_1893 Parvibaculum lavamentivorans DS-1 allophanate hydrolase YP_001413165.1 2054699 D 402881 CDS YP_001413166.1 154252342 5457032 complement(2056486..2057121) 1 NC_009719.1 TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: pmf:P9303_00971 possible phosphatase; histidinol-phosphate phosphatase family protein 2057121 5457032 Plav_1894 Parvibaculum lavamentivorans DS-1 histidinol-phosphate phosphatase family protein YP_001413166.1 2056486 R 402881 CDS YP_001413167.1 154252343 5456166 2057222..2058688 1 NC_009719.1 TIGRFAM: cytidyltransferase-related domain; rfaE bifunctional protein; PFAM: cytidylyltransferase; PfkB domain protein; KEGG: mag:amb0778 ADP-heptose synthase; bifunctional protein RfaE 2058688 5456166 Plav_1895 Parvibaculum lavamentivorans DS-1 bifunctional protein RfaE YP_001413167.1 2057222 D 402881 CDS YP_001413168.1 154252344 5456626 2058697..2059479 1 NC_009719.1 PFAM: Abortive infection protein; KEGG: btl:BALH_4146 CAAX amino terminal protease family; abortive infection protein 2059479 5456626 Plav_1896 Parvibaculum lavamentivorans DS-1 abortive infection protein YP_001413168.1 2058697 D 402881 CDS YP_001413169.1 154252345 5456559 complement(2059470..2060048) 1 NC_009719.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 2060048 5456559 Plav_1897 Parvibaculum lavamentivorans DS-1 phosphoheptose isomerase YP_001413169.1 2059470 R 402881 CDS YP_001413170.1 154252346 5454322 2060304..2061680 1 NC_009719.1 PFAM: Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; KEGG: swi:Swit_1382 hypothetical protein; hypothetical protein 2061680 5454322 Plav_1898 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413170.1 2060304 D 402881 CDS YP_001413171.1 154252347 5454149 2061699..2064785 1 NC_009719.1 KEGG: swi:Swit_1381 hypothetical protein; hypothetical protein 2064785 5454149 Plav_1899 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413171.1 2061699 D 402881 CDS YP_001413172.1 154252348 5454456 complement(2065070..2066038) 1 NC_009719.1 TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: mes:Meso_0318 putative ribonuclease BN; putative ribonuclease BN 2066038 5454456 Plav_1900 Parvibaculum lavamentivorans DS-1 putative ribonuclease BN YP_001413172.1 2065070 R 402881 CDS YP_001413173.1 154252349 5453828 complement(2066258..2067247) 1 NC_009719.1 TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KEGG: rpe:RPE_0696 KpsF/GutQ family protein; KpsF/GutQ family protein 2067247 5453828 Plav_1901 Parvibaculum lavamentivorans DS-1 KpsF/GutQ family protein YP_001413173.1 2066258 R 402881 CDS YP_001413174.1 154252350 5457028 2067465..2068271 1 NC_009719.1 PFAM: metallophosphoesterase; KEGG: rru:Rru_A3111 metallophosphoesterase; metallophosphoesterase 2068271 5457028 Plav_1902 Parvibaculum lavamentivorans DS-1 metallophosphoesterase YP_001413174.1 2067465 D 402881 CDS YP_001413175.1 154252351 5456522 2068464..2069129 1 NC_009719.1 PFAM: polysaccharide export protein; KEGG: hne:HNE_2650 polysaccharide biosynthesis/export protein; polysaccharide export protein 2069129 5456522 Plav_1903 Parvibaculum lavamentivorans DS-1 polysaccharide export protein YP_001413175.1 2068464 D 402881 CDS YP_001413176.1 154252352 5454938 2069483..2070010 1 NC_009719.1 hypothetical protein 2070010 5454938 Plav_1904 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413176.1 2069483 D 402881 CDS YP_001413177.1 154252353 5453488 2070109..2071380 1 NC_009719.1 KEGG: hypothetical protein; hypothetical protein 2071380 5453488 Plav_1905 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413177.1 2070109 D 402881 CDS YP_001413178.1 154252354 5453487 2071538..2073808 1 NC_009719.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: hypothetical protein; non-specific protein-tyrosine kinase 2073808 5453487 Plav_1906 Parvibaculum lavamentivorans DS-1 non-specific protein-tyrosine kinase YP_001413178.1 2071538 D 402881 CDS YP_001413179.1 154252355 5457024 2073798..2074526 1 NC_009719.1 KEGG: rru:Rru_A1491 hypothetical protein; hypothetical protein 2074526 5457024 Plav_1907 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413179.1 2073798 D 402881 CDS YP_001413180.1 154252356 5456999 complement(2074523..2075941) 1 NC_009719.1 PFAM: O-antigen polymerase; KEGG: rru:Rru_A1492 hypothetical protein; O-antigen polymerase 2075941 5456999 Plav_1908 Parvibaculum lavamentivorans DS-1 O-antigen polymerase YP_001413180.1 2074523 R 402881 CDS YP_001413181.1 154252357 5457009 complement(2075938..2077965) 1 NC_009719.1 PFAM: acyltransferase 3; KEGG: swi:Swit_4615 acyltransferase 3; acyltransferase 3 2077965 5457009 Plav_1909 Parvibaculum lavamentivorans DS-1 acyltransferase 3 YP_001413181.1 2075938 R 402881 CDS YP_001413182.1 154252358 5454969 2078119..2079681 1 NC_009719.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: bfr:BF2001 putative flippase; polysaccharide biosynthesis protein 2079681 5454969 Plav_1910 Parvibaculum lavamentivorans DS-1 polysaccharide biosynthesis protein YP_001413182.1 2078119 D 402881 CDS YP_001413183.1 154252359 5456701 2079721..2081145 1 NC_009719.1 hypothetical protein 2081145 5456701 Plav_1911 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413183.1 2079721 D 402881 CDS YP_001413184.1 154252360 5455489 2081252..2082211 1 NC_009719.1 PFAM: sulfotransferase; KEGG: aeh:Mlg_2328 sulfotransferase; sulfotransferase 2082211 5455489 Plav_1912 Parvibaculum lavamentivorans DS-1 sulfotransferase YP_001413184.1 2081252 D 402881 CDS YP_001413185.1 154252361 5455028 2082560..2083696 1 NC_009719.1 PFAM: glycosyl transferase group 1; KEGG: rxy:Rxyl_0689 glycosyl transferase, group 1; group 1 glycosyl transferase 2083696 5455028 Plav_1913 Parvibaculum lavamentivorans DS-1 group 1 glycosyl transferase YP_001413185.1 2082560 D 402881 CDS YP_001413186.1 154252362 5455067 2083693..2084727 1 NC_009719.1 PFAM: glycosyl transferase group 1; KEGG: aau:AAur_4121 putative glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 2084727 5455067 Plav_1914 Parvibaculum lavamentivorans DS-1 group 1 glycosyl transferase YP_001413186.1 2083693 D 402881 CDS YP_001413187.1 154252363 5455078 2084720..2085787 1 NC_009719.1 PFAM: polysaccharide pyruvyl transferase; KEGG: bld:BLi03680 YvfF; polysaccharide pyruvyl transferase 2085787 5455078 Plav_1915 Parvibaculum lavamentivorans DS-1 polysaccharide pyruvyl transferase YP_001413187.1 2084720 D 402881 CDS YP_001413188.1 154252364 5455806 complement(2085789..2086925) 1 NC_009719.1 PFAM: glycosyl transferase group 1; KEGG: sru:SRU_0281 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 2086925 5455806 Plav_1916 Parvibaculum lavamentivorans DS-1 group 1 glycosyl transferase YP_001413188.1 2085789 R 402881 CDS YP_001413189.1 154252365 5456669 complement(2086942..2087895) 1 NC_009719.1 PFAM: glycosyl transferase family 2; KEGG: ava:Ava_0844 glycosyl transferase, family 2; glycosyl transferase family protein 2087895 5456669 Plav_1917 Parvibaculum lavamentivorans DS-1 glycosyl transferase family protein YP_001413189.1 2086942 R 402881 CDS YP_001413190.1 154252366 5454968 complement(2087929..2089191) 1 NC_009719.1 PFAM: O-antigen polymerase; KEGG: vpa:VPA1409 hypothetical protein; O-antigen polymerase 2089191 5454968 Plav_1918 Parvibaculum lavamentivorans DS-1 O-antigen polymerase YP_001413190.1 2087929 R 402881 CDS YP_001413191.1 154252367 5455893 complement(2089185..2090408) 1 NC_009719.1 PFAM: glycosyl transferase group 1; KEGG: rba:RB8313 putative glycosyl transferase (WbnE); group 1 glycosyl transferase 2090408 5455893 Plav_1919 Parvibaculum lavamentivorans DS-1 group 1 glycosyl transferase YP_001413191.1 2089185 R 402881 CDS YP_001413192.1 154252368 5455927 2090630..2091160 1 NC_009719.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 2091160 5455927 Plav_1920 Parvibaculum lavamentivorans DS-1 type 11 methyltransferase YP_001413192.1 2090630 D 402881 CDS YP_001413193.1 154252369 5457018 complement(2091304..2092608) 1 NC_009719.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: rpe:RPE_4206 UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 2092608 5457018 Plav_1921 Parvibaculum lavamentivorans DS-1 UDP-glucose 6-dehydrogenase YP_001413193.1 2091304 R 402881 CDS YP_001413194.1 154252370 5455060 2092758..2093729 1 NC_009719.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ade:Adeh_0221 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2093729 5455060 Plav_1922 Parvibaculum lavamentivorans DS-1 NAD-dependent epimerase/dehydratase YP_001413194.1 2092758 D 402881 CDS YP_001413195.1 154252371 5453526 2093816..2094895 1 NC_009719.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: rle:pRL90133 putative GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 2094895 5453526 Plav_1923 Parvibaculum lavamentivorans DS-1 GDP-mannose 4,6-dehydratase YP_001413195.1 2093816 D 402881 CDS YP_001413196.1 154252372 5454521 2095008..2096102 1 NC_009719.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mba:Mbar_A0034 GDP-mannose 4,6 dehydratase; NAD-dependent epimerase/dehydratase 2096102 5454521 Plav_1924 Parvibaculum lavamentivorans DS-1 NAD-dependent epimerase/dehydratase YP_001413196.1 2095008 D 402881 CDS YP_001413197.1 154252373 5453638 2096392..2097912 1 NC_009719.1 PFAM: sugar transferase; KEGG: mes:Meso_1154 sugar transferase; sugar transferase 2097912 5453638 Plav_1925 Parvibaculum lavamentivorans DS-1 sugar transferase YP_001413197.1 2096392 D 402881 CDS YP_001413198.1 154252374 5454109 complement(2097937..2098824) 1 NC_009719.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: ret:RHE_CH03561 UTP-glucose-1-phosphate uridylyltransferase protein; UTP-glucose-1-phosphate uridylyltransferase 2098824 5454109 Plav_1926 Parvibaculum lavamentivorans DS-1 UTP-glucose-1-phosphate uridylyltransferase YP_001413198.1 2097937 R 402881 CDS YP_001413199.1 154252375 5454944 2099052..2100485 1 NC_009719.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin domain protein; Cupin 2 conserved barrel domain protein; KEGG: tbd:Tbd_1239 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2100485 5454944 Plav_1927 Parvibaculum lavamentivorans DS-1 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_001413199.1 2099052 D 402881 CDS YP_001413200.1 154252376 5454453 2100670..2101332 1 NC_009719.1 KEGG: gbe:GbCGDNIH1_0402 hypothetical protein; hypothetical protein 2101332 5454453 Plav_1928 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413200.1 2100670 D 402881 CDS YP_001413201.1 154252377 5454950 2101459..2102226 1 NC_009719.1 PFAM: beta-lactamase domain protein; KEGG: mlo:mll0231 hypothetical protein; beta-lactamase domain-containing protein 2102226 5454950 Plav_1929 Parvibaculum lavamentivorans DS-1 beta-lactamase domain-containing protein YP_001413201.1 2101459 D 402881 CDS YP_001413202.1 154252378 5455576 complement(2102215..2103096) 1 NC_009719.1 KEGG: pmy:Pmen_3653 metal-dependent hydrolase-like protein; metal-dependent hydrolase-like protein 2103096 5455576 Plav_1930 Parvibaculum lavamentivorans DS-1 metal-dependent hydrolase-like protein YP_001413202.1 2102215 R 402881 CDS YP_001413203.1 154252379 5455941 2103269..2103562 1 NC_009719.1 hypothetical protein 2103562 5455941 Plav_1931 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413203.1 2103269 D 402881 CDS YP_001413204.1 154252380 5455514 complement(2103569..2105125) 1 NC_009719.1 PFAM: sugar transferase; KEGG: eca:ECA1420 undecaprenyl-phosphate galactosephosphotransferase; undecaprenyl-phosphate galactose phosphotransferase 2105125 5455514 Plav_1932 Parvibaculum lavamentivorans DS-1 undecaprenyl-phosphate galactose phosphotransferase YP_001413204.1 2103569 R 402881 CDS YP_001413205.1 154252381 5455884 2105290..2106321 1 NC_009719.1 TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; KEGG: ttj:TTHB114 galactose-1-phosphate uridylyltransferase; galactose-1-phosphate uridylyltransferase 2106321 5455884 Plav_1933 Parvibaculum lavamentivorans DS-1 galactose-1-phosphate uridylyltransferase YP_001413205.1 2105290 D 402881 CDS YP_001413206.1 154252382 5453658 2106318..2107367 1 NC_009719.1 TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: ttj:TTHA0595 galactokinase; galactokinase 2107367 5453658 Plav_1934 Parvibaculum lavamentivorans DS-1 galactokinase YP_001413206.1 2106318 D 402881 CDS YP_001413207.1 154252383 5454024 complement(2107369..2108940) 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; MHYT domain protein; KEGG: mag:amb2546 signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2108940 5454024 Plav_1935 Parvibaculum lavamentivorans DS-1 integral membrane sensor signal transduction histidine kinase YP_001413207.1 2107369 R 402881 CDS YP_001413208.1 154252384 5455026 complement(2109000..2110697) 1 NC_009719.1 PFAM: protein of unknown function DUF368; KEGG: pin:Ping_0693 inner membrane protein DUF368; hypothetical protein 2110697 5455026 Plav_1936 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413208.1 2109000 R 402881 CDS YP_001413209.1 154252385 5455200 complement(2110780..2112093) 1 NC_009719.1 PFAM: glycoside hydrolase family 4; KEGG: rrs:RoseRS_2891 glycoside hydrolase, family 4; glycoside hydrolase 2112093 5455200 Plav_1937 Parvibaculum lavamentivorans DS-1 glycoside hydrolase YP_001413209.1 2110780 R 402881 CDS YP_001413210.1 154252386 5454753 2112189..2114183 1 NC_009719.1 PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; KEGG: eli:ELI_03710 beta-galactosidase; beta-galactosidase 2114183 5454753 Plav_1938 Parvibaculum lavamentivorans DS-1 beta-galactosidase YP_001413210.1 2112189 D 402881 CDS YP_001413211.1 154252387 5453751 2114284..2115567 1 NC_009719.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: ppu:PP_4798 membrane-bound lytic murein transglycosylase, putative; lytic murein transglycosylase 2115567 5453751 Plav_1939 Parvibaculum lavamentivorans DS-1 lytic murein transglycosylase YP_001413211.1 2114284 D 402881 CDS YP_001413212.1 154252388 5455017 2115741..2117159 1 NC_009719.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rpd:RPD_2240 protein of unknown function DUF404; hypothetical protein 2117159 5455017 Plav_1940 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413212.1 2115741 D 402881 CDS YP_001413213.1 154252389 5453776 2117164..2118105 1 NC_009719.1 PFAM: protein of unknown function DUF403; KEGG: rpe:RPE_2296 protein of unknown function DUF403; hypothetical protein 2118105 5453776 Plav_1941 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413213.1 2117164 D 402881 CDS YP_001413214.1 154252390 5454957 2118118..2118939 1 NC_009719.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: bbt:BBta_5275 hypothetical protein; transglutaminase domain-containing protein 2118939 5454957 Plav_1942 Parvibaculum lavamentivorans DS-1 transglutaminase domain-containing protein YP_001413214.1 2118118 D 402881 CDS YP_001413215.1 154252391 5454386 2119000..2119743 1 NC_009719.1 PFAM: 20S proteasome A and B subunits; KEGG: bbt:BBta_5276 hypothetical protein; 20S proteasome subunits A/B 2119743 5454386 Plav_1943 Parvibaculum lavamentivorans DS-1 20S proteasome subunits A/B YP_001413215.1 2119000 D 402881 CDS YP_001413216.1 154252392 5455988 2119814..2121070 1 NC_009719.1 hypothetical protein 2121070 5455988 Plav_1944 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413216.1 2119814 D 402881 CDS YP_001413217.1 154252393 5453554 2121070..2121357 1 NC_009719.1 hypothetical protein 2121357 5453554 Plav_1945 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413217.1 2121070 D 402881 CDS YP_001413218.1 154252394 5456853 2121492..2123390 1 NC_009719.1 PFAM: acyltransferase 3; KEGG: swi:Swit_4615 acyltransferase 3; acyltransferase 3 2123390 5456853 Plav_1946 Parvibaculum lavamentivorans DS-1 acyltransferase 3 YP_001413218.1 2121492 D 402881 CDS YP_001413219.1 154252395 5454926 2123432..2125360 1 NC_009719.1 PFAM: acyltransferase 3; KEGG: cch:Cag_1265 putative membrane-located cell surface saccharide saccharide acetylase protein; acyltransferase 3 2125360 5454926 Plav_1947 Parvibaculum lavamentivorans DS-1 acyltransferase 3 YP_001413219.1 2123432 D 402881 CDS YP_001413220.1 154252396 5454297 complement(2125366..2126064) 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: nar:Saro_2405 glutathione S-transferase-like; glutathione S-transferase domain-containing protein 2126064 5454297 Plav_1948 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001413220.1 2125366 R 402881 CDS YP_001413221.1 154252397 5454931 complement(2126147..2128225) 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: fatty oxidation complex, alpha subunit; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 2128225 5454931 Plav_1949 Parvibaculum lavamentivorans DS-1 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_001413221.1 2126147 R 402881 CDS YP_001413222.1 154252398 5456668 2128351..2129097 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: sma:SAV6701 TetR-family transcriptional regulator; TetR family transcriptional regulator 2129097 5456668 Plav_1950 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001413222.1 2128351 D 402881 CDS YP_001413223.1 154252399 5457005 2129237..2130550 1 NC_009719.1 PFAM: cytochrome P450; KEGG: eli:ELI_14945 cytochrome P450 family protein; cytochrome P450 2130550 5457005 Plav_1951 Parvibaculum lavamentivorans DS-1 cytochrome P450 YP_001413223.1 2129237 D 402881 CDS YP_001413224.1 154252400 5456350 2130859..2131989 1 NC_009719.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: swi:Swit_4150 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 2131989 5456350 Plav_1952 Parvibaculum lavamentivorans DS-1 Rieske (2Fe-2S) domain-containing protein YP_001413224.1 2130859 D 402881 CDS YP_001413225.1 154252401 5456793 complement(2131990..2132298) 1 NC_009719.1 SMART: helix-turn-helix domain protein; KEGG: rru:Rru_A3065 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein 2132298 5456793 Plav_1953 Parvibaculum lavamentivorans DS-1 helix-turn-helix domain-containing protein YP_001413225.1 2131990 R 402881 CDS YP_001413226.1 154252402 5456406 complement(2132315..2132653) 1 NC_009719.1 KEGG: pde:Pden_0484 RelE-like cytotoxic translational repressor of toxin-antitoxin stability system; RelE-like cytotoxic translational repressor of toxin-antitoxin stability system 2132653 5456406 Plav_1954 Parvibaculum lavamentivorans DS-1 RelE-like cytotoxic translational repressor of toxin-antitoxin stability system YP_001413226.1 2132315 R 402881 CDS YP_001413227.1 154252403 5454991 2132894..2133841 1 NC_009719.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pat:Patl_0102 ATPase associated with various cellular activities, AAA_5; ATPase 2133841 5454991 Plav_1955 Parvibaculum lavamentivorans DS-1 ATPase YP_001413227.1 2132894 D 402881 CDS YP_001413228.1 154252404 5454993 2133853..2135298 1 NC_009719.1 PFAM: VWA containing CoxE family protein; KEGG: rpa:RPA0742 hypothetical protein; VWA containing CoxE family protein 2135298 5454993 Plav_1956 Parvibaculum lavamentivorans DS-1 VWA containing CoxE family protein YP_001413228.1 2133853 D 402881 CDS YP_001413229.1 154252405 5456707 2135563..2136558 1 NC_009719.1 PFAM: protein of unknown function DUF459; KEGG: swi:Swit_3458 lipolytic enzyme, G-D-S-L family; hypothetical protein 2136558 5456707 Plav_1957 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413229.1 2135563 D 402881 CDS YP_001413230.1 154252406 5456548 2136542..2137780 1 NC_009719.1 KEGG: mxa:MXAN_6502 hypothetical protein; hypothetical protein 2137780 5456548 Plav_1958 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413230.1 2136542 D 402881 CDS YP_001413231.1 154252407 5456665 2137895..2139346 1 NC_009719.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: swi:Swit_3460 membrane bound O-acyl transferase, MBOAT family protein; membrane bound O-acyl transferase MBOAT family protein 2139346 5456665 Plav_1959 Parvibaculum lavamentivorans DS-1 membrane bound O-acyl transferase MBOAT family protein YP_001413231.1 2137895 D 402881 CDS YP_001413232.1 154252408 5456582 2139354..2139767 1 NC_009719.1 hypothetical protein 2139767 5456582 Plav_1960 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413232.1 2139354 D 402881 CDS YP_001413233.1 154252409 5453835 complement(2139773..2140102) 1 NC_009719.1 PFAM: branched-chain amino acid transport; KEGG: reh:H16_A0508 predicted membrane protein; branched-chain amino acid transport 2140102 5453835 Plav_1961 Parvibaculum lavamentivorans DS-1 branched-chain amino acid transport YP_001413233.1 2139773 R 402881 CDS YP_001413234.1 154252410 5454138 complement(2140099..2140821) 1 NC_009719.1 PFAM: AzlC family protein; KEGG: hma:rrnAC1920 branched-chain amino acid transport protein AzlC; AzlC family protein 2140821 5454138 Plav_1962 Parvibaculum lavamentivorans DS-1 AzlC family protein YP_001413234.1 2140099 R 402881 CDS YP_001413235.1 154252411 5456466 complement(2140898..2142319) 1 NC_009719.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 2142319 gltD 5456466 gltD Parvibaculum lavamentivorans DS-1 glutamate synthase subunit beta YP_001413235.1 2140898 R 402881 CDS YP_001413236.1 154252412 5456577 complement(2142320..2147062) 1 NC_009719.1 PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bra:BRADO6238 glutamate synthase [NADPH] large chain (NADPH-GOGAT); glutamate synthase 2147062 5456577 Plav_1964 Parvibaculum lavamentivorans DS-1 glutamate synthase YP_001413236.1 2142320 R 402881 CDS YP_001413237.1 154252413 5455232 2147591..2148457 1 NC_009719.1 hypothetical protein 2148457 5455232 Plav_1965 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413237.1 2147591 D 402881 CDS YP_001413238.1 154252414 5454741 2148505..2149542 1 NC_009719.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cyb:CYB_0540 putative low specificity L-threonine aldolase; threonine aldolase 2149542 5454741 Plav_1966 Parvibaculum lavamentivorans DS-1 threonine aldolase YP_001413238.1 2148505 D 402881 CDS YP_001413239.1 154252415 5456102 2149618..2150049 1 NC_009719.1 PFAM: Hpt domain protein; KEGG: rru:Rru_A2652 hypothetical protein; Hpt domain-containing protein 2150049 5456102 Plav_1967 Parvibaculum lavamentivorans DS-1 Hpt domain-containing protein YP_001413239.1 2149618 D 402881 CDS YP_001413240.1 154252416 5456975 complement(2150054..2152594) 1 NC_009719.1 KEGG: mag:amb1110 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 2152594 5456975 Plav_1968 Parvibaculum lavamentivorans DS-1 multi-sensor hybrid histidine kinase YP_001413240.1 2150054 R 402881 CDS YP_001413241.1 154252417 5456679 2152824..2155505 1 NC_009719.1 PFAM: CoA-binding domain protein; KEGG: csa:Csal_1092 GCN5-related N-acetyltransferase; CoA-binding domain-containing protein 2155505 5456679 Plav_1969 Parvibaculum lavamentivorans DS-1 CoA-binding domain-containing protein YP_001413241.1 2152824 D 402881 CDS YP_001413242.1 154252418 5455556 complement(2155558..2156022) 1 NC_009719.1 PFAM: heat shock protein Hsp20; KEGG: sme:SMc04040 probable heat shock protein; heat shock protein Hsp20 2156022 5455556 Plav_1971 Parvibaculum lavamentivorans DS-1 heat shock protein Hsp20 YP_001413242.1 2155558 R 402881 CDS YP_001413243.1 154252419 5453382 2156213..2157424 1 NC_009719.1 PFAM: Extracellular ligand-binding receptor; KEGG: pub:SAR11_1361 Leu/Ile/Val-binding protein precursor; extracellular ligand-binding receptor 2157424 5453382 Plav_1972 Parvibaculum lavamentivorans DS-1 extracellular ligand-binding receptor YP_001413243.1 2156213 D 402881 CDS YP_001413244.1 154252420 5454930 2157444..2158346 1 NC_009719.1 PFAM: inner-membrane translocator; KEGG: pub:SAR11_1360 probable high-affinity branched-chain amino acid transport permease protein; inner-membrane translocator 2158346 5454930 Plav_1973 Parvibaculum lavamentivorans DS-1 inner-membrane translocator YP_001413244.1 2157444 D 402881 CDS YP_001413245.1 154252421 5456363 2158343..2159296 1 NC_009719.1 PFAM: inner-membrane translocator; KEGG: pub:SAR11_1359 probable high-affinity branched-chain amino acid transport permease protein; inner-membrane translocator 2159296 5456363 Plav_1974 Parvibaculum lavamentivorans DS-1 inner-membrane translocator YP_001413245.1 2158343 D 402881 CDS YP_001413246.1 154252422 5454315 2159293..2160036 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pub:SAR11_1358 ATP-binding protein of ABC transporter NatA; ABC transporter-like protein 2160036 5454315 Plav_1975 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001413246.1 2159293 D 402881 CDS YP_001413247.1 154252423 5455227 2160036..2160896 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pub:SAR11_1357 ATP-binding protein of branched-chain amino acid ABC transporter; ABC transporter-like protein 2160896 5455227 Plav_1976 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001413247.1 2160036 D 402881 CDS YP_001413248.1 154252424 5455357 2161008..2161787 1 NC_009719.1 hypothetical protein 2161787 5455357 Plav_1977 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413248.1 2161008 D 402881 CDS YP_001413249.1 154252425 5455185 2161964..2162440 1 NC_009719.1 KEGG: dme:Dmel_CG13482 CG13482; hypothetical protein 2162440 5455185 Plav_1978 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413249.1 2161964 D 402881 CDS YP_001413250.1 154252426 5456476 complement(2162501..2164057) 1 NC_009719.1 PFAM: carboxyl transferase; KEGG: bja:blr3940 putative propionyl-CoA carboxylase beta chain; propionyl-CoA carboxylase 2164057 5456476 Plav_1979 Parvibaculum lavamentivorans DS-1 propionyl-CoA carboxylase YP_001413250.1 2162501 R 402881 CDS YP_001413251.1 154252427 5455414 2164153..2164566 1 NC_009719.1 hypothetical protein 2164566 5455414 Plav_1980 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413251.1 2164153 D 402881 CDS YP_001413252.1 154252428 5455309 2164599..2165510 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: rpa:RPA0888 putative lysophospholipase L2; alpha/beta hydrolase fold protein 2165510 5455309 Plav_1981 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001413252.1 2164599 D 402881 CDS YP_001413253.1 154252429 5456499 complement(2165559..2166365) 1 NC_009719.1 TIGRFAM: histidinol-phosphate phosphatase, putative; PFAM: inositol monophosphatase; KEGG: pen:PSEEN3013 inositol monophosphatase; histidinol-phosphate phosphatase 2166365 5456499 Plav_1982 Parvibaculum lavamentivorans DS-1 histidinol-phosphate phosphatase YP_001413253.1 2165559 R 402881 CDS YP_001413254.1 154252430 5455801 complement(2166482..2167489) 1 NC_009719.1 PFAM: amidohydrolase 2; KEGG: hne:HNE_1399 amidohydrolase family protein; amidohydrolase 2 2167489 5455801 Plav_1983 Parvibaculum lavamentivorans DS-1 amidohydrolase 2 YP_001413254.1 2166482 R 402881 CDS YP_001413255.1 154252431 5456261 complement(2167654..2169501) 1 NC_009719.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: sal:Sala_2303 GTP-binding protein TypA; GTP-binding protein TypA 2169501 5456261 Plav_1984 Parvibaculum lavamentivorans DS-1 GTP-binding protein TypA YP_001413255.1 2167654 R 402881 CDS YP_001413256.1 154252432 5455431 complement(2169654..2170061) 1 NC_009719.1 KEGG: bbt:BBta_0772 hypothetical protein; hypothetical protein 2170061 5455431 Plav_1985 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413256.1 2169654 R 402881 CDS YP_001413257.1 154252433 5455727 complement(2170073..2170429) 1 NC_009719.1 KEGG: bbt:BBta_0773 hypothetical protein; hypothetical protein 2170429 5455727 Plav_1986 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413257.1 2170073 R 402881 CDS YP_001413258.1 154252434 5454896 complement(2170469..2171320) 1 NC_009719.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rpb:RPB_0799 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 2171320 5454896 Plav_1987 Parvibaculum lavamentivorans DS-1 helix-turn-helix domain-containing protein YP_001413258.1 2170469 R 402881 CDS YP_001413259.1 154252435 5455490 complement(2171413..2172003) 1 NC_009719.1 PFAM: YceI family protein; KEGG: rde:RD1_3042 hypothetical protein; hypothetical protein 2172003 5455490 Plav_1988 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413259.1 2171413 R 402881 CDS YP_001413260.1 154252436 5456108 2172222..2173478 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: rsh:Rsph17029_0041 major facilitator superfamily MFS_1; major facilitator superfamily transporter 2173478 5456108 Plav_1989 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001413260.1 2172222 D 402881 CDS YP_001413261.1 154252437 5456401 2173490..2174038 1 NC_009719.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: tbd:Tbd_0524 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2174038 5456401 Plav_1990 Parvibaculum lavamentivorans DS-1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001413261.1 2173490 D 402881 CDS YP_001413262.1 154252438 5456609 2174035..2174733 1 NC_009719.1 KEGG: mmr:Mmar10_1174 hypothetical protein; hypothetical protein 2174733 5456609 Plav_1991 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413262.1 2174035 D 402881 CDS YP_001413263.1 154252439 5456676 complement(2175063..2176169) 1 NC_009719.1 PFAM: glycosyl transferase group 1; KEGG: mag:amb0265 glycosyltransferase; group 1 glycosyl transferase 2176169 5456676 Plav_1992 Parvibaculum lavamentivorans DS-1 group 1 glycosyl transferase YP_001413263.1 2175063 R 402881 CDS YP_001413264.1 154252440 5455561 complement(2176261..2177229) 1 NC_009719.1 PFAM: metallophosphoesterase; KEGG: mag:amb0266 hypothetical protein; metallophosphoesterase 2177229 5455561 Plav_1993 Parvibaculum lavamentivorans DS-1 metallophosphoesterase YP_001413264.1 2176261 R 402881 CDS YP_001413265.1 154252441 5453945 2177558..2178466 1 NC_009719.1 PFAM: diacylglycerol kinase catalytic region; KEGG: mag:amb0267 Sphingosine kinase and enzyme related to eukaryotic diacylglycerol kinase; diacylglycerol kinase catalytic subunit 2178466 5453945 Plav_1994 Parvibaculum lavamentivorans DS-1 diacylglycerol kinase catalytic subunit YP_001413265.1 2177558 D 402881 CDS YP_001413266.1 154252442 5455774 complement(2178463..2180055) 1 NC_009719.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: hch:HCH_00332 glutamate synthase domain 2; ferredoxin-dependent glutamate synthase 2180055 5455774 Plav_1995 Parvibaculum lavamentivorans DS-1 ferredoxin-dependent glutamate synthase YP_001413266.1 2178463 R 402881 CDS YP_001413267.1 154252443 5453713 complement(2180080..2181012) 1 NC_009719.1 PFAM: Lytic transglycosylase catalytic; KEGG: gox:GOX2386 hypothetical protein; lytic transglycosylase catalytic subunit 2181012 5453713 Plav_1996 Parvibaculum lavamentivorans DS-1 lytic transglycosylase catalytic subunit YP_001413267.1 2180080 R 402881 CDS YP_001413268.1 154252444 5455724 complement(2181397..2182419) 1 NC_009719.1 PFAM: N-formylglutamate amidohydrolase; KEGG: mag:amb2177 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 2182419 5455724 Plav_1997 Parvibaculum lavamentivorans DS-1 N-formylglutamate amidohydrolase YP_001413268.1 2181397 R 402881 CDS YP_001413269.1 154252445 5455292 2182658..2183020 1 NC_009719.1 PFAM: response regulator receiver; KEGG: mes:Meso_2750 response regulator receiver protein; response regulator receiver protein 2183020 5455292 Plav_1998 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001413269.1 2182658 D 402881 CDS YP_001413270.1 154252446 5454282 2183360..2184532 1 NC_009719.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: eba:ebA7103 putative HlyD-like secretion protein; RND family efflux transporter MFP subunit 2184532 5454282 Plav_1999 Parvibaculum lavamentivorans DS-1 RND family efflux transporter MFP subunit YP_001413270.1 2183360 D 402881 CDS YP_001413271.1 154252447 5454430 2184556..2187630 1 NC_009719.1 PFAM: acriflavin resistance protein; KEGG: azo:azo3134 RND efflux transporter, permease protein; acriflavin resistance protein 2187630 5454430 Plav_2000 Parvibaculum lavamentivorans DS-1 acriflavin resistance protein YP_001413271.1 2184556 D 402881 CDS YP_001413272.1 154252448 5455839 complement(2187643..2188866) 1 NC_009719.1 KEGG: mgm:Mmc1_0538 hypothetical protein; hypothetical protein 2188866 5455839 Plav_2001 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413272.1 2187643 R 402881 CDS YP_001413273.1 154252449 5456612 complement(2188943..2189776) 1 NC_009719.1 KEGG: abo:ABO_1014 hypothetical protein; hypothetical protein 2189776 5456612 Plav_2002 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413273.1 2188943 R 402881 CDS YP_001413274.1 154252450 5455699 complement(2189851..2190909) 1 NC_009719.1 hypothetical protein 2190909 5455699 Plav_2003 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413274.1 2189851 R 402881 CDS YP_001413275.1 154252451 5456754 complement(2190988..2191824) 1 NC_009719.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: reh:H16_A0037 alpha-ketoglutarate-dependent taurine dioxygenase; taurine dioxygenase 2191824 5456754 Plav_2004 Parvibaculum lavamentivorans DS-1 taurine dioxygenase YP_001413275.1 2190988 R 402881 CDS YP_001413276.1 154252452 5453663 complement(2191844..2192452) 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: bja:bll5700 hypothetical glutathione S-transferase like protein; glutathione S-transferase domain-containing protein 2192452 5453663 Plav_2005 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001413276.1 2191844 R 402881 CDS YP_001413277.1 154252453 5453351 complement(2192506..2194890) 1 NC_009719.1 KEGG: azo:azo2253 probable exporter of RND superfamily; RND superfamily exporter 2194890 5453351 Plav_2006 Parvibaculum lavamentivorans DS-1 RND superfamily exporter YP_001413277.1 2192506 R 402881 CDS YP_001413278.1 154252454 5456807 2194988..2196373 1 NC_009719.1 PFAM: protein of unknown function DUF1329; KEGG: shw:Sputw3181_1811 protein of unknown function DUF1329; hypothetical protein 2196373 5456807 Plav_2007 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413278.1 2194988 D 402881 CDS YP_001413279.1 154252455 5454238 complement(2196414..2197100) 1 NC_009719.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpt:Mpe_A0980 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 2197100 5454238 Plav_2008 Parvibaculum lavamentivorans DS-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001413279.1 2196414 R 402881 CDS YP_001413280.1 154252456 5453717 complement(2197118..2198260) 1 NC_009719.1 KEGG: bbt:BBta_2931 hypothetical protein; hypothetical protein 2198260 5453717 Plav_2009 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413280.1 2197118 R 402881 CDS YP_001413281.1 154252457 5454220 complement(2198265..2198678) 1 NC_009719.1 PFAM: protein of unknown function DUF35; KEGG: rpb:RPB_3587 protein of unknown function DUF35; hypothetical protein 2198678 5454220 Plav_2010 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413281.1 2198265 R 402881 CDS YP_001413282.1 154252458 5455201 2198837..2199196 1 NC_009719.1 hypothetical protein 2199196 5455201 Plav_2011 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413282.1 2198837 D 402881 CDS YP_001413283.1 154252459 5453805 complement(2199200..2199871) 1 NC_009719.1 PFAM: nitroreductase; KEGG: bam:Bamb_6027 nitroreductase; nitroreductase 2199871 5453805 Plav_2012 Parvibaculum lavamentivorans DS-1 nitroreductase YP_001413283.1 2199200 R 402881 CDS YP_001413284.1 154252460 5455410 2199995..2201077 1 NC_009719.1 KEGG: hne:HNE_1437 hypothetical protein; hypothetical protein 2201077 5455410 Plav_2013 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413284.1 2199995 D 402881 CDS YP_001413285.1 154252461 5455871 2201083..2202873 1 NC_009719.1 PFAM: sulfatase; KEGG: hne:HNE_1668 sulfatase family protein; sulfatase 2202873 5455871 Plav_2014 Parvibaculum lavamentivorans DS-1 sulfatase YP_001413285.1 2201083 D 402881 CDS YP_001413286.1 154252462 5455323 complement(2202879..2203271) 1 NC_009719.1 PFAM: regulatory protein LuxR; KEGG: rpe:RPE_1121 transcriptional regulator, LuxR family; response regulator receiver protein 2203271 5455323 Plav_2015 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001413286.1 2202879 R 402881 CDS YP_001413287.1 154252463 5455571 complement(2203264..2204289) 1 NC_009719.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bte:BTH_I2358 lipase/esterase; alpha/beta hydrolase domain-containing protein 2204289 5455571 Plav_2016 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase domain-containing protein YP_001413287.1 2203264 R 402881 CDS YP_001413288.1 154252464 5456982 2204461..2205903 1 NC_009719.1 hypothetical protein 2205903 5456982 Plav_2017 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413288.1 2204461 D 402881 CDS YP_001413289.1 154252465 5454573 complement(2205900..2207135) 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa54220 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 2207135 5454573 Plav_2018 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001413289.1 2205900 R 402881 CDS YP_001413290.1 154252466 5455582 2207300..2208088 1 NC_009719.1 KEGG: maq:Maqu_3542 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 2208088 5455582 Plav_2019 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001413290.1 2207300 D 402881 CDS YP_001413291.1 154252467 5457047 2208186..2209535 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: mmr:Mmar10_2520 major facilitator superfamily MFS_1; major facilitator superfamily transporter 2209535 5457047 Plav_2020 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001413291.1 2208186 D 402881 CDS YP_001413292.1 154252468 5455523 complement(2209545..2209769) 1 NC_009719.1 hypothetical protein 2209769 5455523 Plav_2021 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413292.1 2209545 R 402881 CDS YP_001413293.1 154252469 5455488 complement(2209742..2210707) 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: hne:HNE_3153 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold protein 2210707 5455488 Plav_2022 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001413293.1 2209742 R 402881 CDS YP_001413294.1 154252470 5453503 complement(2210768..2211247) 1 NC_009719.1 PFAM: response regulator receiver; KEGG: response regulator/sensor histidine kinase; response regulator receiver protein 2211247 5453503 Plav_2023 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001413294.1 2210768 R 402881 CDS YP_001413295.1 154252471 5456808 complement(2211244..2212737) 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: bms:BR1659 sensor histidine kinase; signal transduction histidine kinase 2212737 5456808 Plav_2024 Parvibaculum lavamentivorans DS-1 signal transduction histidine kinase YP_001413295.1 2211244 R 402881 CDS YP_001413296.1 154252472 5455220 2213047..2213172 1 NC_009719.1 KEGG: nwi:Nwi_0983 ribosomal protein L36; 50S ribosomal protein L36 2213172 5455220 Plav_2025 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L36 YP_001413296.1 2213047 D 402881 CDS YP_001413297.1 154252473 5454692 2213262..2213873 1 NC_009719.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hydrolase, haloacid dehalogenase-like family; K07025 putative hydrolase of the HAD superfamily; HAD family hydrolase 2213873 5454692 Plav_2026 Parvibaculum lavamentivorans DS-1 HAD family hydrolase YP_001413297.1 2213262 D 402881 CDS YP_001413298.1 154252474 5456232 2213980..2215035 1 NC_009719.1 PFAM: Saccharopine dehydrogenase; KEGG: ilo:IL1477 hypothetical protein; saccharopine dehydrogenase 2215035 5456232 Plav_2027 Parvibaculum lavamentivorans DS-1 saccharopine dehydrogenase YP_001413298.1 2213980 D 402881 CDS YP_001413299.1 154252475 5455228 2215037..2215654 1 NC_009719.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: nwi:Nwi_0984 TPR repeat protein; hypothetical protein 2215654 5455228 Plav_2028 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413299.1 2215037 D 402881 CDS YP_001413300.1 154252476 5454479 2215702..2216733 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: nha:Nham_1217 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2216733 5454479 Plav_2029 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001413300.1 2215702 D 402881 CDS YP_001413301.1 154252477 5456180 complement(2216768..2218198) 1 NC_009719.1 TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; KEGG: nha:Nham_1218 pyruvate kinase; pyruvate kinase 2218198 5456180 Plav_2030 Parvibaculum lavamentivorans DS-1 pyruvate kinase YP_001413301.1 2216768 R 402881 CDS YP_001413302.1 154252478 5455409 complement(2218182..2219525) 1 NC_009719.1 PFAM: MOFRL domain protein; KEGG: bbt:BBta_7083 putative hydroxypyruvate reductase; hydroxypyruvate reductase 2219525 5455409 Plav_2031 Parvibaculum lavamentivorans DS-1 hydroxypyruvate reductase YP_001413302.1 2218182 R 402881 CDS YP_001413303.1 154252479 5455955 2219546..2220385 1 NC_009719.1 PFAM: N-formylglutamate amidohydrolase; KEGG: atc:AGR_L_2148 hypothetical protein; N-formylglutamate amidohydrolase 2220385 5455955 Plav_2032 Parvibaculum lavamentivorans DS-1 N-formylglutamate amidohydrolase YP_001413303.1 2219546 D 402881 CDS YP_001413304.1 154252480 5454229 2220382..2220708 1 NC_009719.1 PFAM: protein of unknown function DUF1244; KEGG: xcb:XC_1932 hypothetical protein; hypothetical protein 2220708 5454229 Plav_2033 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413304.1 2220382 D 402881 CDS YP_001413305.1 154252481 5455698 2220825..2221082 1 NC_009719.1 KEGG: bbt:BBta_6866 hypothetical protein; hypothetical protein 2221082 5455698 Plav_2034 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413305.1 2220825 D 402881 CDS YP_001413306.1 154252482 5453951 2221154..2222914 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; regulatory protein LuxR; KEGG: rha:RHA1_ro04883 probable hydrolase; alpha/beta hydrolase fold protein 2222914 5453951 Plav_2035 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001413306.1 2221154 D 402881 CDS YP_001413307.1 154252483 5454308 2223058..2224824 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; regulatory protein LuxR; KEGG: mxa:MXAN_6875 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold protein 2224824 5454308 Plav_2036 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001413307.1 2223058 D 402881 CDS YP_001413308.1 154252484 5455752 2224940..2225536 1 NC_009719.1 KEGG: rci:RRC32 hypothetical protein; hypothetical protein 2225536 5455752 Plav_2037 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413308.1 2224940 D 402881 CDS YP_001413309.1 154252485 5453457 2225698..2226333 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hne:HNE_1605 acetyltransferase, GNAT family; N-acetyltransferase GCN5 2226333 5453457 Plav_2038 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001413309.1 2225698 D 402881 CDS YP_001413310.1 154252486 5455398 complement(2226354..2227082) 1 NC_009719.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bra:BRADO2432 nitrogen fixation regulation protein FixK, Crp/Fnr family; CRP/FNR family transcriptional regulator 2227082 5455398 Plav_2039 Parvibaculum lavamentivorans DS-1 CRP/FNR family transcriptional regulator YP_001413310.1 2226354 R 402881 CDS YP_001413311.1 154252487 5455824 complement(2227205..2227609) 1 NC_009719.1 PFAM: response regulator receiver; KEGG: dar:Daro_3108 regulatory protein, LuxR:response regulator receiver; response regulator receiver protein 2227609 5455824 Plav_2040 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001413311.1 2227205 R 402881 CDS YP_001413312.1 154252488 5453470 complement(2227682..2228326) 1 NC_009719.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: swi:Swit_5293 response regulator receiver protein; response regulator receiver protein 2228326 5453470 Plav_2041 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001413312.1 2227682 R 402881 CDS YP_001413313.1 154252489 5453765 complement(2228323..2229462) 1 NC_009719.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: mlo:mll6607 two-component, nitrogen fixation sensor protein FixL; PAS/PAC sensor signal transduction histidine kinase 2229462 5453765 Plav_2042 Parvibaculum lavamentivorans DS-1 PAS/PAC sensor signal transduction histidine kinase YP_001413313.1 2228323 R 402881 CDS YP_001413314.1 154252490 5454291 complement(2229551..2229868) 1 NC_009719.1 hypothetical protein 2229868 5454291 Plav_2043 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413314.1 2229551 R 402881 CDS YP_001413315.1 154252491 5454897 2229960..2230838 1 NC_009719.1 PFAM: Ion transport protein; KEGG: jan:Jann_0087 ion transport protein; Ion transport protein 2230838 5454897 Plav_2044 Parvibaculum lavamentivorans DS-1 Ion transport protein YP_001413315.1 2229960 D 402881 CDS YP_001413316.1 154252492 5454348 2231419..2231736 1 NC_009719.1 KEGG: gme:Gmet_2969 hypothetical protein; hypothetical protein 2231736 5454348 Plav_2045 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413316.1 2231419 D 402881 CDS YP_001413317.1 154252493 5455619 2231733..2232089 1 NC_009719.1 KEGG: sme:SMc01416 hypothetical protein; hypothetical protein 2232089 5455619 Plav_2046 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413317.1 2231733 D 402881 CDS YP_001413318.1 154252494 5454921 2232411..2233607 1 NC_009719.1 KEGG: rpe:RPE_2464 hypothetical protein; hypothetical protein 2233607 5454921 Plav_2047 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413318.1 2232411 D 402881 CDS YP_001413319.1 154252495 5456309 2233580..2234113 1 NC_009719.1 hypothetical protein 2234113 5456309 Plav_2048 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413319.1 2233580 D 402881 CDS YP_001413320.1 154252496 5455451 2234110..2236005 1 NC_009719.1 KEGG: rru:Rru_A0809 hypothetical protein; hypothetical protein 2236005 5455451 Plav_2049 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413320.1 2234110 D 402881 CDS YP_001413321.1 154252497 5455332 complement(2236458..2237993) 1 NC_009719.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mlo:mll3001 response regulatory protein; two component sigma-54 specific Fis family transcriptional regulator 2237993 5455332 Plav_2050 Parvibaculum lavamentivorans DS-1 two component sigma-54 specific Fis family transcriptional regulator YP_001413321.1 2236458 R 402881 CDS YP_001413322.1 154252498 5455667 2238359..2239192 1 NC_009719.1 PFAM: OmpA/MotB domain protein; KEGG: rru:Rru_A3328 OmpA/MotB; OmpA/MotB domain-containing protein 2239192 5455667 Plav_2051 Parvibaculum lavamentivorans DS-1 OmpA/MotB domain-containing protein YP_001413322.1 2238359 D 402881 CDS YP_001413323.1 154252499 5455356 2239316..2241160 1 NC_009719.1 TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: bov:BOV_A0076 oligoendopeptidase F; pepF/M3 family oligoendopeptidase 2241160 5455356 Plav_2052 Parvibaculum lavamentivorans DS-1 pepF/M3 family oligoendopeptidase YP_001413323.1 2239316 D 402881 CDS YP_001413324.1 154252500 5455486 2241157..2242542 1 NC_009719.1 PFAM: ABC-1 domain protein; KEGG: hne:HNE_0567 ABC1 family protein; hypothetical protein 2242542 5455486 Plav_2053 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413324.1 2241157 D 402881 CDS YP_001413325.1 154252501 5454150 2242591..2243034 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: hypothetical protein; thioesterase superfamily protein 2243034 5454150 Plav_2054 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001413325.1 2242591 D 402881 CDS YP_001413326.1 154252502 5454191 2243031..2243999 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: hne:HNE_3153 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold protein 2243999 5454191 Plav_2055 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001413326.1 2243031 D 402881 CDS YP_001413327.1 154252503 5454617 2244080..2245606 1 NC_009719.1 PFAM: amidohydrolase 2; KEGG: swi:Swit_1765 amidohydrolase 2; amidohydrolase 2 2245606 5454617 Plav_2056 Parvibaculum lavamentivorans DS-1 amidohydrolase 2 YP_001413327.1 2244080 D 402881 CDS YP_001413328.1 154252504 5454443 2245758..2245901 1 NC_009719.1 PFAM: aa3 type cytochrome c oxidase subunit IV; aa3 type cytochrome c oxidase subunit IV 2245901 5454443 Plav_2057 Parvibaculum lavamentivorans DS-1 aa3 type cytochrome c oxidase subunit IV YP_001413328.1 2245758 D 402881 CDS YP_001413329.1 154252505 5455221 2246029..2247162 1 NC_009719.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: nwi:Nwi_0995 alanine dehydrogenase/PNT; NAD(P)(+) transhydrogenase 2247162 5455221 Plav_2058 Parvibaculum lavamentivorans DS-1 NAD(P)(+) transhydrogenase YP_001413329.1 2246029 D 402881 CDS YP_001413330.1 154252506 5453646 2247162..2247479 1 NC_009719.1 KEGG: rpc:RPC_3967 NAD(P) transhydrogenase subunit alpha part; NAD(P) transhydrogenase subunit alpha 2247479 5453646 Plav_2059 Parvibaculum lavamentivorans DS-1 NAD(P) transhydrogenase subunit alpha YP_001413330.1 2247162 D 402881 CDS YP_001413331.1 154252507 5455505 2247493..2248899 1 NC_009719.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: bov:BOV_A0911 NAD(P) transhydrogenase, beta subunit; NAD(P)(+) transhydrogenase 2248899 5455505 Plav_2060 Parvibaculum lavamentivorans DS-1 NAD(P)(+) transhydrogenase YP_001413331.1 2247493 D 402881 CDS YP_001413332.1 154252508 5456722 2249002..2249379 1 NC_009719.1 KEGG: sal:Sala_2029 hypothetical protein; hypothetical protein 2249379 5456722 Plav_2061 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413332.1 2249002 D 402881 CDS YP_001413333.1 154252509 5456333 2249384..2249734 1 NC_009719.1 KEGG: sil:SPO2052 hypothetical protein; hypothetical protein 2249734 5456333 Plav_2062 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413333.1 2249384 D 402881 CDS YP_001413334.1 154252510 5454649 2249736..2250212 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV3622 hypothetical protein; N-acetyltransferase GCN5 2250212 5454649 Plav_2063 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001413334.1 2249736 D 402881 CDS YP_001413335.1 154252511 5456770 2250386..2252590 1 NC_009719.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pst:PSPTO_3462 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 2252590 5456770 Plav_2064 Parvibaculum lavamentivorans DS-1 TonB-dependent siderophore receptor YP_001413335.1 2250386 D 402881 CDS YP_001413336.1 154252512 5454305 2252613..2253773 1 NC_009719.1 PFAM: PepSY-associated TM helix domain protein; KEGG: hne:HNE_2173 PepSY-associated TM helix domain protein; PepSY-associated TM helix domain-containing protein 2253773 5454305 Plav_2065 Parvibaculum lavamentivorans DS-1 PepSY-associated TM helix domain-containing protein YP_001413336.1 2252613 D 402881 CDS YP_001413337.1 154252513 5454860 2253770..2253955 1 NC_009719.1 KEGG: hypothetical protein; hypothetical protein 2253955 5454860 Plav_2066 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413337.1 2253770 D 402881 CDS YP_001413338.1 154252514 5456398 complement(2254020..2254241) 1 NC_009719.1 PFAM: ribosomal protein S21; KEGG: rle:RL4130 putative 30S ribosomal protein S21; 30S ribosomal protein S21 2254241 5456398 Plav_2067 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S21 YP_001413338.1 2254020 R 402881 CDS YP_001413339.1 154252515 5456358 2254427..2255050 1 NC_009719.1 TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; KEGG: gbe:GbCGDNIH1_0482 peptide deformylase; peptide deformylase 2255050 5456358 Plav_2068 Parvibaculum lavamentivorans DS-1 peptide deformylase YP_001413339.1 2254427 D 402881 CDS YP_001413340.1 154252516 5454574 2255043..2255738 1 NC_009719.1 TIGRFAM: rpsU-divergently transcribed protein; PFAM: COQ9 domain protein; KEGG: jan:Jann_3890 RpsU-divergently transcribed; rpsU-divergently transcribed protein 2255738 5454574 Plav_2069 Parvibaculum lavamentivorans DS-1 rpsU-divergently transcribed protein YP_001413340.1 2255043 D 402881 CDS YP_001413341.1 154252517 5454819 complement(2255735..2256370) 1 NC_009719.1 PFAM: protein of unknown function DUF1457; KEGG: rpb:RPB_2151 hypothetical protein; hypothetical protein 2256370 5454819 Plav_2070 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413341.1 2255735 R 402881 CDS YP_001413342.1 154252518 5456868 complement(2256428..2257537) 1 NC_009719.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: sil:SPO0892 phosphoribosylaminoimidazole carboxylase, ATPase subunit; phosphoribosylaminoimidazole carboxylase ATPase subunit 2257537 5456868 Plav_2071 Parvibaculum lavamentivorans DS-1 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_001413342.1 2256428 R 402881 CDS YP_001413343.1 154252519 5455644 complement(2257537..2258076) 1 NC_009719.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: swi:Swit_3132 phosphoribosylaminoimidazole carboxylase, catalytic subunit; phosphoribosylaminoimidazole carboxylase catalytic subunit 2258076 5455644 Plav_2072 Parvibaculum lavamentivorans DS-1 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_001413343.1 2257537 R 402881 CDS YP_001413344.1 154252520 5453772 complement(2258249..2259373) 1 NC_009719.1 TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU1349 sulfate ABC transporter, ATP-binding protein; sulfate ABC transporter ATPase 2259373 5453772 Plav_2073 Parvibaculum lavamentivorans DS-1 sulfate ABC transporter ATPase YP_001413344.1 2258249 R 402881 CDS YP_001413345.1 154252521 5456862 complement(2259351..2260184) 1 NC_009719.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0109 sulfate ABC transporter, permease protein; sulfate ABC transporter permease 2260184 5456862 Plav_2074 Parvibaculum lavamentivorans DS-1 sulfate ABC transporter permease YP_001413345.1 2259351 R 402881 CDS YP_001413346.1 154252522 5454217 complement(2260194..2261042) 1 NC_009719.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21132 putative sulfate uptake ABC transporter permease protein; sulfate ABC transporter permease 2261042 5454217 Plav_2075 Parvibaculum lavamentivorans DS-1 sulfate ABC transporter permease YP_001413346.1 2260194 R 402881 CDS YP_001413347.1 154252523 5455572 complement(2261067..2262479) 1 NC_009719.1 PFAM: phosphate-selective porin O and P; KEGG: nmu:Nmul_A0898 phosphate-selective porin O and P; phosphate-selective porin O and P 2262479 5455572 Plav_2076 Parvibaculum lavamentivorans DS-1 phosphate-selective porin O and P YP_001413347.1 2261067 R 402881 CDS YP_001413348.1 154252524 5455213 complement(2262530..2263555) 1 NC_009719.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_PE00259 probable sulfate uptake ABC transporter, substrate-binding protein; sulfate ABC transporter substrate-binding protein 2263555 5455213 Plav_2077 Parvibaculum lavamentivorans DS-1 sulfate ABC transporter substrate-binding protein YP_001413348.1 2262530 R 402881 CDS YP_001413349.1 154252525 5456240 complement(2263618..2264064) 1 NC_009719.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: ret:RHE_CH01133 putative transcriptional regulator protein; BadM/Rrf2 family transcriptional regulator 2264064 5456240 Plav_2078 Parvibaculum lavamentivorans DS-1 BadM/Rrf2 family transcriptional regulator YP_001413349.1 2263618 R 402881 CDS YP_001413350.1 154252526 5454879 2264308..2265039 1 NC_009719.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mmr:Mmar10_2568 diguanylate cyclase; diguanylate cyclase 2265039 5454879 Plav_2079 Parvibaculum lavamentivorans DS-1 diguanylate cyclase YP_001413350.1 2264308 D 402881 CDS YP_001413351.1 154252527 5456483 complement(2265045..2265251) 1 NC_009719.1 PFAM: protein of unknown function DUF465; KEGG: rpc:RPC_3958 protein of unknown function DUF465; hypothetical protein 2265251 5456483 Plav_2080 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413351.1 2265045 R 402881 CDS YP_001413352.1 154252528 5454273 complement(2265248..2265880) 1 NC_009719.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: mmr:Mmar10_2570 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2265880 5454273 Plav_2081 Parvibaculum lavamentivorans DS-1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_001413352.1 2265248 R 402881 CDS YP_001413353.1 154252529 5456815 2266016..2266195 1 NC_009719.1 PFAM: protein of unknown function DUF465; KEGG: nwi:Nwi_1004 protein of unknown function DUF465; hypothetical protein 2266195 5456815 Plav_2082 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413353.1 2266016 D 402881 CDS YP_001413354.1 154252530 5454407 complement(2266279..2267907) 1 NC_009719.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mag:amb2501 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; AMP-dependent synthetase and ligase 2267907 5454407 Plav_2083 Parvibaculum lavamentivorans DS-1 AMP-dependent synthetase and ligase YP_001413354.1 2266279 R 402881 CDS YP_001413355.1 154252531 5456289 2268041..2269939 1 NC_009719.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mlo:mll5286 acetyl-CoA synthetase; AMP-dependent synthetase and ligase 2269939 5456289 Plav_2084 Parvibaculum lavamentivorans DS-1 AMP-dependent synthetase and ligase YP_001413355.1 2268041 D 402881 CDS YP_001413356.1 154252532 5456457 complement(2270078..2271100) 1 NC_009719.1 PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: sma:SAV7169 putative zinc-containing dehydrogenase; alcohol dehydrogenase 2271100 5456457 Plav_2085 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001413356.1 2270078 R 402881 CDS YP_001413357.1 154252533 5453455 complement(2271156..2271623) 1 NC_009719.1 PFAM: regulatory protein MarR; KEGG: bja:bll7366 transcriptional regulatory protein; MarR family transcriptional regulator 2271623 5453455 Plav_2086 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001413357.1 2271156 R 402881 CDS YP_001413358.1 154252534 5454801 2271689..2272123 1 NC_009719.1 hypothetical protein 2272123 5454801 Plav_2087 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413358.1 2271689 D 402881 CDS YP_001413359.1 154252535 5456557 2272120..2272566 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: rfr:Rfer_1696 phenylacetic acid degradation-related protein; thioesterase superfamily protein 2272566 5456557 Plav_2088 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001413359.1 2272120 D 402881 CDS YP_001413360.1 154252536 5456506 2272763..2273593 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mes:Meso_3434 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2273593 5456506 Plav_2089 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001413360.1 2272763 D 402881 CDS YP_001413361.1 154252537 5456880 complement(2273874..2274602) 1 NC_009719.1 PFAM: protein of unknown function DUF1013; KEGG: bra:BRADO6589 hypothetical protein; hypothetical protein 2274602 5456880 Plav_2090 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413361.1 2273874 R 402881 CDS YP_001413362.1 154252538 5453383 complement(2274790..2275350) 1 NC_009719.1 KEGG: dar:Daro_2057 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 2275350 5453383 Plav_2091 Parvibaculum lavamentivorans DS-1 twin-arginine translocation pathway signal YP_001413362.1 2274790 R 402881 CDS YP_001413363.1 154252539 5454187 complement(2275455..2276453) 1 NC_009719.1 TIGRFAM: Quinone oxidoreductase putative PIG3; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mes:Meso_3406 alcohol dehydrogenase, zinc-binding; quinone oxidoreductase putative PIG3 2276453 5454187 Plav_2092 Parvibaculum lavamentivorans DS-1 quinone oxidoreductase putative PIG3 YP_001413363.1 2275455 R 402881 CDS YP_001413364.1 154252540 5456477 2276551..2276751 1 NC_009719.1 PFAM: protein of unknown function DUF1192; KEGG: mag:amb2678 hypothetical protein; hypothetical protein 2276751 5456477 Plav_2093 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413364.1 2276551 D 402881 CDS YP_001413365.1 154252541 5453454 2277111..2277701 1 NC_009719.1 PFAM: protein of unknown function DUF1465; KEGG: hypothetical protein; hypothetical protein 2277701 5453454 Plav_2094 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413365.1 2277111 D 402881 CDS YP_001413366.1 154252542 5455159 complement(2277773..2277994) 1 NC_009719.1 PFAM: ribosomal protein L31; KEGG: 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31; 50S ribosomal protein L31 2277994 5455159 Plav_2095 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L31 YP_001413366.1 2277773 R 402881 CDS YP_001413367.1 154252543 5455368 2278311..2280161 1 NC_009719.1 TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_4490 ABC transporter, ATP-binding/permease protein; lipid ABC transporter ATPase/inner membrane protein 2280161 5455368 Plav_2096 Parvibaculum lavamentivorans DS-1 lipid ABC transporter ATPase/inner membrane protein YP_001413367.1 2278311 D 402881 CDS YP_001413368.1 154252544 5455652 2280181..2281272 1 NC_009719.1 PFAM: Arylesterase; KEGG: lic:LIC10347 paraoxonase; arylesterase 2281272 5455652 Plav_2097 Parvibaculum lavamentivorans DS-1 arylesterase YP_001413368.1 2280181 D 402881 CDS YP_001413369.1 154252545 5454385 complement(2281274..2282290) 1 NC_009719.1 PFAM: OmpA/MotB domain protein; KEGG: bmb:BruAb1_1699 OmpA family protein; OmpA/MotB domain-containing protein 2282290 5454385 Plav_2098 Parvibaculum lavamentivorans DS-1 OmpA/MotB domain-containing protein YP_001413369.1 2281274 R 402881 CDS YP_001413370.1 154252546 5454011 complement(2282297..2283259) 1 NC_009719.1 KEGG: nha:Nham_3541 hypothetical protein; hypothetical protein 2283259 5454011 Plav_2099 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413370.1 2282297 R 402881 CDS YP_001413371.1 154252547 5455013 complement(2283291..2283770) 1 NC_009719.1 KEGG: mag:amb1287 lysophospholipase; hypothetical protein 2283770 5455013 Plav_2100 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413371.1 2283291 R 402881 CDS YP_001413372.1 154252548 5453428 complement(2283863..2284666) 1 NC_009719.1 PFAM: inositol monophosphatase; KEGG: bbt:BBta_6932 inositol monophosphatase; inositol-phosphate phosphatase 2284666 5453428 Plav_2101 Parvibaculum lavamentivorans DS-1 inositol-phosphate phosphatase YP_001413372.1 2283863 R 402881 CDS YP_001413373.1 154252549 5456829 complement(2284677..2285240) 1 NC_009719.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2285240 5456829 Plav_2102 Parvibaculum lavamentivorans DS-1 elongation factor P YP_001413373.1 2284677 R 402881 CDS YP_001413374.1 154252550 5455796 complement(2285368..2286441) 1 NC_009719.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mgm:Mmc1_2003 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 2286441 5455796 Plav_2103 Parvibaculum lavamentivorans DS-1 Sel1 domain-containing protein YP_001413374.1 2285368 R 402881 CDS YP_001413375.1 154252551 5454203 complement(2286438..2287109) 1 NC_009719.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; KEGG: rru:Rru_A1080 thiamine-phosphate diphosphorylase; thiamine-phosphate pyrophosphorylase 2287109 5454203 Plav_2104 Parvibaculum lavamentivorans DS-1 thiamine-phosphate pyrophosphorylase YP_001413375.1 2286438 R 402881 CDS YP_001413376.1 154252552 5454713 complement(2287196..2288215) 1 NC_009719.1 PFAM: fructose-bisphosphate aldolase class-I; KEGG: mes:Meso_3436 fructose-bisphosphate aldolase, class-I; fructose-bisphosphate aldolase 2288215 5454713 Plav_2105 Parvibaculum lavamentivorans DS-1 fructose-bisphosphate aldolase YP_001413376.1 2287196 R 402881 CDS YP_001413377.1 154252553 5455341 complement(2288249..2289457) 1 NC_009719.1 PFAM: phosphoglycerate kinase; KEGG: mes:Meso_3437 phosphoglycerate kinase; phosphoglycerate kinase 2289457 5455341 Plav_2106 Parvibaculum lavamentivorans DS-1 phosphoglycerate kinase YP_001413377.1 2288249 R 402881 CDS YP_001413378.1 154252554 5454279 complement(2289476..2290483) 1 NC_009719.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: bra:BRADO1124 glyceraldehyde-3-phosphate dehydrogenase (GAPDH); glyceraldehyde-3-phosphate dehydrogenase 2290483 5454279 Plav_2107 Parvibaculum lavamentivorans DS-1 glyceraldehyde-3-phosphate dehydrogenase YP_001413378.1 2289476 R 402881 CDS YP_001413379.1 154252555 5456611 complement(2290507..2292561) 1 NC_009719.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: sme:SMc03978 transketolase; transketolase 2292561 5456611 Plav_2108 Parvibaculum lavamentivorans DS-1 transketolase YP_001413379.1 2290507 R 402881 CDS YP_001413380.1 154252556 5456526 2292882..2293148 1 NC_009719.1 KEGG: hne:HNE_3456 hypothetical protein; hypothetical protein 2293148 5456526 Plav_2109 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413380.1 2292882 D 402881 CDS YP_001413381.1 154252557 5455651 2293174..2293533 1 NC_009719.1 PFAM: protein of unknown function DUF710; KEGG: bra:BRADO1128 hypothetical protein; hypothetical protein 2293533 5455651 Plav_2110 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413381.1 2293174 D 402881 CDS YP_001413382.1 154252558 5456936 2293784..2294383 1 NC_009719.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: nha:Nham_3528 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 2294383 5456936 Plav_2111 Parvibaculum lavamentivorans DS-1 5-formyltetrahydrofolate cyclo-ligase YP_001413382.1 2293784 D 402881 CDS YP_001413383.1 154252559 5455195 2294380..2295192 1 NC_009719.1 PFAM: metallophosphoesterase; KEGG: bra:BRADO1139 metallo-phosphoesterase; metallophosphoesterase 2295192 5455195 Plav_2112 Parvibaculum lavamentivorans DS-1 metallophosphoesterase YP_001413383.1 2294380 D 402881 CDS YP_001413384.1 154252560 5453627 2295199..2296224 1 NC_009719.1 KEGG: aci:ACIAD0599 hypothetical protein; hypothetical protein 2296224 5453627 Plav_2113 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413384.1 2295199 D 402881 CDS YP_001413385.1 154252561 5456185 2296581..2297327 1 NC_009719.1 PFAM: protein of unknown function DUF28; KEGG: rpa:RPA1097 hypothetical protein; hypothetical protein 2297327 5456185 Plav_2114 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413385.1 2296581 D 402881 CDS YP_001413386.1 154252562 5454487 2297431..2297958 1 NC_009719.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; KEGG: atc:AGR_L_2221 crossover junction endodeoxyribonuclease RuvC (holliday junction nuclease RuvC); crossover junction endodeoxyribonuclease RuvC 2297958 5454487 Plav_2115 Parvibaculum lavamentivorans DS-1 crossover junction endodeoxyribonuclease RuvC YP_001413386.1 2297431 D 402881 CDS YP_001413387.1 154252563 5453578 2297955..2298572 1 NC_009719.1 TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA domain protein; DNA recombination protein RuvA domain I; KEGG: nha:Nham_3522 Holliday junction DNA helicase RuvA; Holliday junction DNA helicase RuvA 2298572 5453578 Plav_2116 Parvibaculum lavamentivorans DS-1 Holliday junction DNA helicase RuvA YP_001413387.1 2297955 D 402881 CDS YP_001413388.1 154252564 5454486 2298569..2299627 1 NC_009719.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 2299627 ruvB 5454486 ruvB Parvibaculum lavamentivorans DS-1 Holliday junction DNA helicase RuvB YP_001413388.1 2298569 D 402881 CDS YP_001413389.1 154252565 5454234 2299624..2300100 1 NC_009719.1 TIGRFAM: Pol-Pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: hypothetical protein; Pol-Pal system-associated acyl-CoA thioesterase 2300100 5454234 Plav_2118 Parvibaculum lavamentivorans DS-1 Pol-Pal system-associated acyl-CoA thioesterase YP_001413389.1 2299624 D 402881 CDS YP_001413390.1 154252566 5455364 2300340..2301065 1 NC_009719.1 TIGRFAM: Tol-Pal system TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: mag:amb3214 biopolymer transport protein; Tol-Pal system protein TolQ 2301065 5455364 Plav_2119 Parvibaculum lavamentivorans DS-1 Tol-Pal system protein TolQ YP_001413390.1 2300340 D 402881 CDS YP_001413391.1 154252567 5455846 2301070..2301528 1 NC_009719.1 TIGRFAM: Biopolymer transport TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bov:BOV_1641 protein TolR; biopolymer transport TolR 2301528 5455846 Plav_2120 Parvibaculum lavamentivorans DS-1 biopolymer transport TolR YP_001413391.1 2301070 D 402881 CDS YP_001413392.1 154252568 5453601 2301538..2302371 1 NC_009719.1 KEGG: bms:BR1698 TolA protein; hypothetical protein 2302371 5453601 Plav_2121 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413392.1 2301538 D 402881 CDS YP_001413393.1 154252569 5455208 2302396..2303736 1 NC_009719.1 TIGRFAM: Tol-Pal system beta propeller repeat TolB; PFAM: TolB domain protein; WD40 domain protein beta Propeller; KEGG: atc:AGR_L_2244 TolB protein precursor; beta-propeller repeat-containing to-pal system protein TolB 2303736 5455208 Plav_2122 Parvibaculum lavamentivorans DS-1 beta-propeller repeat-containing to-pal system protein TolB YP_001413393.1 2302396 D 402881 CDS YP_001413394.1 154252570 5456739 2304081..2304581 1 NC_009719.1 TIGRFAM: Peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: rpa:RPA1123 omp16 protein; peptidoglycan-associated lipoprotein 2304581 5456739 Plav_2123 Parvibaculum lavamentivorans DS-1 peptidoglycan-associated lipoprotein YP_001413394.1 2304081 D 402881 CDS YP_001413395.1 154252571 5456758 2304741..2305646 1 NC_009719.1 TIGRFAM: Tol-Pal system YbgF; KEGG: rru:Rru_A1096 hypothetical protein; Tol-Pal system protein YbgF 2305646 5456758 Plav_2124 Parvibaculum lavamentivorans DS-1 Tol-Pal system protein YbgF YP_001413395.1 2304741 D 402881 CDS YP_001413396.1 154252572 5455847 2305681..2307012 1 NC_009719.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: ExsB family protein; PP-loop domain protein; KEGG: mag:amb3207 predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA(Ile)-lysidine synthetase 2307012 5455847 Plav_2125 Parvibaculum lavamentivorans DS-1 tRNA(Ile)-lysidine synthetase YP_001413396.1 2305681 D 402881 CDS YP_001413397.1 154252573 5456813 2307190..2309115 1 NC_009719.1 KEGG: rpa:RPA1126 metalloprotease (cell division protein) FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 2309115 5456813 Plav_2126 Parvibaculum lavamentivorans DS-1 ATP-dependent metalloprotease FtsH YP_001413397.1 2307190 D 402881 CDS YP_001413398.1 154252574 5455841 complement(2309200..2309523) 1 NC_009719.1 PFAM: ferredoxin; KEGG: mmr:Mmar10_0081 ferredoxin; ferredoxin 2309523 5455841 Plav_2127 Parvibaculum lavamentivorans DS-1 ferredoxin YP_001413398.1 2309200 R 402881 CDS YP_001413399.1 154252575 5455334 complement(2309535..2310806) 1 NC_009719.1 PFAM: cytochrome P450; KEGG: pol:Bpro_5301 cytochrome P450; cytochrome P450 2310806 5455334 Plav_2128 Parvibaculum lavamentivorans DS-1 cytochrome P450 YP_001413399.1 2309535 R 402881 CDS YP_001413400.1 154252576 5455736 2310986..2311618 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: aha:AHA_3547 LitR, transcriptional regulator; TetR family transcriptional regulator 2311618 5455736 Plav_2129 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001413400.1 2310986 D 402881 CDS YP_001413401.1 154252577 5455266 2311663..2312484 1 NC_009719.1 TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; KEGG: sty:HCM1.222 dihydropteroate synthase; dihydropteroate synthase 2312484 5455266 Plav_2130 Parvibaculum lavamentivorans DS-1 dihydropteroate synthase YP_001413401.1 2311663 D 402881 CDS YP_001413402.1 154252578 5453618 2312650..2313996 1 NC_009719.1 TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: bja:bll7408 phosphoglucomutase/phosphomannomutase; phosphoglucosamine mutase 2313996 5453618 Plav_2131 Parvibaculum lavamentivorans DS-1 phosphoglucosamine mutase YP_001413402.1 2312650 D 402881 CDS YP_001413403.1 154252579 5453364 2314027..2314875 1 NC_009719.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: mmr:Mmar10_0552 phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase 2314875 5453364 Plav_2132 Parvibaculum lavamentivorans DS-1 phosphomethylpyrimidine kinase YP_001413403.1 2314027 D 402881 CDS YP_001413404.1 154252580 5455349 complement(2314864..2316294) 1 NC_009719.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: mlo:mll0059 transcriptional regulator; GntR family transcriptional regulator 2316294 5455349 Plav_2133 Parvibaculum lavamentivorans DS-1 GntR family transcriptional regulator YP_001413404.1 2314864 R 402881 CDS YP_001413405.1 154252581 5454180 2316423..2317214 1 NC_009719.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: mag:amb3196 predicted epimerase, PhzC/PhzF homolog; PhzF family phenazine biosynthesis protein 2317214 5454180 Plav_2134 Parvibaculum lavamentivorans DS-1 PhzF family phenazine biosynthesis protein YP_001413405.1 2316423 D 402881 CDS YP_001413406.1 154252582 5455140 2317242..2317835 1 NC_009719.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rle:RL3242 putative transmembrane transporter protein; lysine exporter protein LysE/YggA 2317835 5455140 Plav_2135 Parvibaculum lavamentivorans DS-1 lysine exporter protein LysE/YggA YP_001413406.1 2317242 D 402881 CDS YP_001413407.1 154252583 5453613 complement(2317832..2318725) 1 NC_009719.1 PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: mmr:Mmar10_0553 protein of unknown function DUF6, transmembrane; hypothetical protein 2318725 5453613 Plav_2136 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413407.1 2317832 R 402881 CDS YP_001413408.1 154252584 5455528 2318930..2320102 1 NC_009719.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 2320102 5455528 Plav_2137 Parvibaculum lavamentivorans DS-1 phosphoserine aminotransferase YP_001413408.1 2318930 D 402881 CDS YP_001413409.1 154252585 5456827 2320176..2321753 1 NC_009719.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 2321753 5456827 Plav_2138 Parvibaculum lavamentivorans DS-1 D-3-phosphoglycerate dehydrogenase YP_001413409.1 2320176 D 402881 CDS YP_001413410.1 154252586 5455918 2321883..2322371 1 NC_009719.1 hypothetical protein 2322371 5455918 Plav_2139 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413410.1 2321883 D 402881 CDS YP_001413411.1 154252587 5456567 2322462..2322959 1 NC_009719.1 PFAM: protein of unknown function DUF1457; hypothetical protein 2322959 5456567 Plav_2140 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413411.1 2322462 D 402881 CDS YP_001413412.1 154252588 5456757 complement(2322961..2323629) 1 NC_009719.1 PFAM: pentapeptide repeat protein; KEGG: pentapeptide repeat family protein; pentapeptide repeat-containing protein 2323629 5456757 Plav_2141 Parvibaculum lavamentivorans DS-1 pentapeptide repeat-containing protein YP_001413412.1 2322961 R 402881 CDS YP_001413413.1 154252589 5456550 complement(2323635..2324024) 1 NC_009719.1 PFAM: OsmC family protein; KEGG: bur:Bcep18194_B2297 OsmC-like protein; OsmC family protein 2324024 5456550 Plav_2142 Parvibaculum lavamentivorans DS-1 OsmC family protein YP_001413413.1 2323635 R 402881 CDS YP_001413414.1 154252590 5454423 complement(2324035..2324952) 1 NC_009719.1 PFAM: Pirin domain protein; KEGG: nha:Nham_0009 pirin-like; pirin domain-containing protein 2324952 5454423 Plav_2143 Parvibaculum lavamentivorans DS-1 pirin domain-containing protein YP_001413414.1 2324035 R 402881 CDS YP_001413415.1 154252591 5456238 2325200..2326492 1 NC_009719.1 PFAM: adenylosuccinate synthetase; KEGG: mes:Meso_3159 adenylosuccinate synthetase; adenylosuccinate synthase 2326492 5456238 Plav_2144 Parvibaculum lavamentivorans DS-1 adenylosuccinate synthase YP_001413415.1 2325200 D 402881 CDS YP_001413416.1 154252592 5454227 complement(2326566..2326967) 1 NC_009719.1 KEGG: rde:RD1_1607 inner membrane protein; inner membrane protein 2326967 5454227 Plav_2145 Parvibaculum lavamentivorans DS-1 inner membrane protein YP_001413416.1 2326566 R 402881 CDS YP_001413417.1 154252593 5453615 complement(2327103..2327519) 1 NC_009719.1 KEGG: xcb:XC_1469 inner membrane protein; inner membrane protein 2327519 5453615 Plav_2146 Parvibaculum lavamentivorans DS-1 inner membrane protein YP_001413417.1 2327103 R 402881 CDS YP_001413418.1 154252594 5455623 complement(2327544..2328608) 1 NC_009719.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: mes:Meso_3082 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 2328608 5455623 Plav_2147 Parvibaculum lavamentivorans DS-1 2-nitropropane dioxygenase YP_001413418.1 2327544 R 402881 CDS YP_001413419.1 154252595 5455962 2328838..2329212 1 NC_009719.1 KEGG: eli:ELI_11775 hypothetical protein; hypothetical protein 2329212 5455962 Plav_2148 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413419.1 2328838 D 402881 CDS YP_001413420.1 154252596 5454905 2329216..2331087 1 NC_009719.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 2331087 5454905 Plav_2149 Parvibaculum lavamentivorans DS-1 thiamine biosynthesis protein ThiC YP_001413420.1 2329216 D 402881 CDS YP_001413421.1 154252597 5454647 2331416..2331790 1 NC_009719.1 KEGG: ret:RHE_CH03261 putative bleomycin resistance protein; putative bleomycin resistance protein 2331790 5454647 Plav_2150 Parvibaculum lavamentivorans DS-1 putative bleomycin resistance protein YP_001413421.1 2331416 D 402881 CDS YP_001413422.1 154252598 5456761 2331790..2332320 1 NC_009719.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: bbt:BBta_6231 putative G/U mismatch-specific DNA glycosylase; uracil-DNA glycosylase superfamily protein 2332320 5456761 Plav_2151 Parvibaculum lavamentivorans DS-1 uracil-DNA glycosylase superfamily protein YP_001413422.1 2331790 D 402881 CDS YP_001413423.1 154252599 5455012 complement(2332461..2334206) 1 NC_009719.1 PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: reu:Reut_B5252 hypothetical protein; amidohydrolase 3 2334206 5455012 Plav_2152 Parvibaculum lavamentivorans DS-1 amidohydrolase 3 YP_001413423.1 2332461 R 402881 CDS YP_001413424.1 154252600 5456695 2334365..2335537 1 NC_009719.1 hypothetical protein 2335537 5456695 Plav_2153 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413424.1 2334365 D 402881 CDS YP_001413425.1 154252601 5454847 2335613..2337169 1 NC_009719.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: bxe:Bxe_A2154 putative phospholipase D precursor; phospholipase D/transphosphatidylase 2337169 5454847 Plav_2154 Parvibaculum lavamentivorans DS-1 phospholipase D/transphosphatidylase YP_001413425.1 2335613 D 402881 CDS YP_001413426.1 154252602 5453453 2337259..2337675 1 NC_009719.1 KEGG: rha:RHA1_ro10139 possible ketosteroid isomerase-related protein; putative ketosteroid isomerase-like protein 2337675 5453453 Plav_2155 Parvibaculum lavamentivorans DS-1 putative ketosteroid isomerase-like protein YP_001413426.1 2337259 D 402881 CDS YP_001413427.1 154252603 5453395 2337761..2338417 1 NC_009719.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: bja:blr0834 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase 2338417 5453395 Plav_2156 Parvibaculum lavamentivorans DS-1 peptide methionine sulfoxide reductase YP_001413427.1 2337761 D 402881 CDS YP_001413428.1 154252604 5456356 complement(2338414..2338761) 1 NC_009719.1 hypothetical protein 2338761 5456356 Plav_2157 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413428.1 2338414 R 402881 CDS YP_001413429.1 154252605 5455650 complement(2338837..2340000) 1 NC_009719.1 PFAM: protein of unknown function UPF0118; KEGG: mlo:mlr4869 hypothetical protein; hypothetical protein 2340000 5455650 Plav_2158 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413429.1 2338837 R 402881 CDS YP_001413430.1 154252606 5456223 complement(2340055..2341077) 1 NC_009719.1 TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: rru:Rru_A1110 sigma 32 (RpoH); RNA polymerase sigma-32 subunit RpoH 2341077 5456223 Plav_2159 Parvibaculum lavamentivorans DS-1 RNA polymerase sigma-32 subunit RpoH YP_001413430.1 2340055 R 402881 CDS YP_001413431.1 154252607 5454755 complement(2341247..2342596) 1 NC_009719.1 PFAM: HipA domain protein; KEGG: hypothetical protein; HipA domain-containing protein 2342596 5454755 Plav_2160 Parvibaculum lavamentivorans DS-1 HipA domain-containing protein YP_001413431.1 2341247 R 402881 CDS YP_001413432.1 154252608 5454817 complement(2342593..2342973) 1 NC_009719.1 PFAM: helix-turn-helix domain protein; KEGG: transcriptional regulator, Cro/CI family; helix-turn-helix domain-containing protein 2342973 5454817 Plav_2161 Parvibaculum lavamentivorans DS-1 helix-turn-helix domain-containing protein YP_001413432.1 2342593 R 402881 CDS YP_001413433.1 154252609 5455879 complement(2343067..2343390) 1 NC_009719.1 KEGG: pna:Pnap_0085 putative transcriptional regulator; putative transcriptional regulator 2343390 5455879 Plav_2162 Parvibaculum lavamentivorans DS-1 putative transcriptional regulator YP_001413433.1 2343067 R 402881 CDS YP_001413434.1 154252610 5454591 complement(2343572..2343871) 1 NC_009719.1 hypothetical protein 2343871 5454591 Plav_2163 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413434.1 2343572 R 402881 CDS YP_001413435.1 154252611 5454579 complement(2343868..2345316) 1 NC_009719.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: sme:SMc00647 putative ribosomal large subunit pseudouridine synthase protein; RluA family pseudouridine synthase 2345316 5454579 Plav_2164 Parvibaculum lavamentivorans DS-1 RluA family pseudouridine synthase YP_001413435.1 2343868 R 402881 CDS YP_001413436.1 154252612 5456790 complement(2346199..2346927) 1 NC_009719.1 TIGRFAM: methyltransferase FkbM family; KEGG: acr:Acry_1688 methyltransferase FkbM family; FkbM family methyltransferase 2346927 5456790 Plav_2165 Parvibaculum lavamentivorans DS-1 FkbM family methyltransferase YP_001413436.1 2346199 R 402881 CDS YP_001413437.1 154252613 5453980 complement(2346947..2347357) 1 NC_009719.1 PFAM: membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG); KEGG: gvi:glr3057 probable glutathione S-transferase; eicosanoid and glutathione metabolism membrane protein 2347357 5453980 Plav_2166 Parvibaculum lavamentivorans DS-1 eicosanoid and glutathione metabolism membrane protein YP_001413437.1 2346947 R 402881 CDS YP_001413438.1 154252614 5454977 complement(2347438..2348181) 1 NC_009719.1 KEGG: rpa:RPA1622 hypothetical protein; hypothetical protein 2348181 5454977 Plav_2167 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413438.1 2347438 R 402881 CDS YP_001413439.1 154252615 5455339 complement(2348308..2348964) 1 NC_009719.1 PFAM: conserved hypothetical protein; KEGG: azo:azo0042 conserved hypothetical secreted protein; hypothetical protein 2348964 5455339 Plav_2168 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413439.1 2348308 R 402881 CDS YP_001413440.1 154252616 5456386 2349138..2351240 1 NC_009719.1 KEGG: mgm:Mmc1_0209 hypothetical protein; hypothetical protein 2351240 5456386 Plav_2169 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413440.1 2349138 D 402881 CDS YP_001413441.1 154252617 5455449 2351243..2351464 1 NC_009719.1 KEGG: cch:Cag_1043 hypothetical protein; hypothetical protein 2351464 5455449 Plav_2170 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413441.1 2351243 D 402881 CDS YP_001413442.1 154252618 5455676 2351473..2351823 1 NC_009719.1 PFAM: conserved hypothetical protein; KEGG: pat:Patl_2138 uncharacterised conserved protein UCP025560; hypothetical protein 2351823 5455676 Plav_2171 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413442.1 2351473 D 402881 CDS YP_001413443.1 154252619 5455712 complement(2352147..2352956) 1 NC_009719.1 TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: hne:HNE_0169 3'(2'),5'-bisphosphate nucleotidase; 3'(2'),5'-bisphosphate nucleotidase 2352956 5455712 Plav_2172 Parvibaculum lavamentivorans DS-1 3'(2'),5'-bisphosphate nucleotidase YP_001413443.1 2352147 R 402881 CDS YP_001413444.1 154252620 5453514 2353116..2353784 1 NC_009719.1 KEGG: bbt:BBta_6560 hypothetical protein; hypothetical protein 2353784 5453514 Plav_2173 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413444.1 2353116 D 402881 CDS YP_001413445.1 154252621 5454580 complement(2353864..2354571) 1 NC_009719.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mlo:mll2816 two-component transcriptional regulator; two component transcriptional regulator 2354571 5454580 Plav_2174 Parvibaculum lavamentivorans DS-1 two component transcriptional regulator YP_001413445.1 2353864 R 402881 CDS YP_001413446.1 154252622 5453875 2354939..2356276 1 NC_009719.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 2356276 fliI 5453875 fliI Parvibaculum lavamentivorans DS-1 flagellum-specific ATP synthase YP_001413446.1 2354939 D 402881 CDS YP_001413447.1 154252623 5454648 2356276..2356686 1 NC_009719.1 TIGRFAM: flagellar export protein FliJ; KEGG: rpc:RPC_4231 flagellar export FliJ; flagellar export protein FliJ 2356686 5454648 Plav_2176 Parvibaculum lavamentivorans DS-1 flagellar export protein FliJ YP_001413447.1 2356276 D 402881 CDS YP_001413448.1 154252624 5453802 2356772..2357257 1 NC_009719.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein 2357257 5453802 Plav_2177 Parvibaculum lavamentivorans DS-1 putative nucleotide-binding protein YP_001413448.1 2356772 D 402881 CDS YP_001413449.1 154252625 5455446 complement(2357254..2357577) 1 NC_009719.1 KEGG: mmr:Mmar10_1731 hypothetical protein; hypothetical protein 2357577 5455446 Plav_2178 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413449.1 2357254 R 402881 CDS YP_001413450.1 154252626 5453867 complement(2357906..2360041) 1 NC_009719.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 2360041 flhA 5453867 flhA Parvibaculum lavamentivorans DS-1 flagellar biosynthesis protein FlhA YP_001413450.1 2357906 R 402881 CDS YP_001413451.1 154252627 5456682 complement(2360071..2361438) 1 NC_009719.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: transcriptional regulator FlbD; two component sigma-54 specific Fis family transcriptional regulator 2361438 5456682 Plav_2180 Parvibaculum lavamentivorans DS-1 two component sigma-54 specific Fis family transcriptional regulator YP_001413451.1 2360071 R 402881 CDS YP_001413452.1 154252628 5456693 complement(2361498..2361851) 1 NC_009719.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: rpb:RPB_1275 flagellar motor switch FliN; flagellar motor switch protein FliN 2361851 5456693 Plav_2181 Parvibaculum lavamentivorans DS-1 flagellar motor switch protein FliN YP_001413452.1 2361498 R 402881 CDS YP_001413453.1 154252629 5456409 complement(2361875..2362594) 1 NC_009719.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 2362594 fliH 5456409 fliH Parvibaculum lavamentivorans DS-1 flagellar assembly protein H YP_001413453.1 2361875 R 402881 CDS YP_001413454.1 154252630 5453962 complement(2362601..2363629) 1 NC_009719.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 2363629 fliG 5453962 fliG Parvibaculum lavamentivorans DS-1 flagellar motor switch protein G YP_001413454.1 2362601 R 402881 CDS YP_001413455.1 154252631 5455992 complement(2363641..2365299) 1 NC_009719.1 TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: rpc:RPC_0941 flagellar M-ring protein FliF; flagellar M-ring protein FliF 2365299 5455992 Plav_2184 Parvibaculum lavamentivorans DS-1 flagellar M-ring protein FliF YP_001413455.1 2363641 R 402881 CDS YP_001413456.1 154252632 5455321 complement(2365594..2365869) 1 NC_009719.1 PFAM: protein of unknown function DUF1153; KEGG: rle:RL3754 hypothetical protein; hypothetical protein 2365869 5455321 Plav_2185 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413456.1 2365594 R 402881 CDS YP_001413457.1 154252633 5455117 complement(2366002..2366682) 1 NC_009719.1 PFAM: flagellar hook capping protein; KEGG: bra:BRADO5897 putative flagellar basal-body rod modification protein FlgD; flagellar hook capping protein 2366682 5455117 Plav_2186 Parvibaculum lavamentivorans DS-1 flagellar hook capping protein YP_001413457.1 2366002 R 402881 CDS YP_001413458.1 154252634 5453418 complement(2366701..2368188) 1 NC_009719.1 PFAM: flagellar hook-length control protein; KEGG: rpe:RPE_1040 flagellar hook-length control protein; flagellar hook-length control protein 2368188 5453418 Plav_2187 Parvibaculum lavamentivorans DS-1 flagellar hook-length control protein YP_001413458.1 2366701 R 402881 CDS YP_001413459.1 154252635 5455037 2368317..2369705 1 NC_009719.1 PFAM: ExsB family protein; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: mes:Meso_2217 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 2369705 5455037 Plav_2188 Parvibaculum lavamentivorans DS-1 tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase YP_001413459.1 2368317 D 402881 CDS YP_001413460.1 154252636 5455150 2369802..2370491 1 NC_009719.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: gbe:GbCGDNIH1_2260 phosphatidyl-N-methylethanolamine N-methyltransferase; phosphatidylethanolamine N-methyltransferase 2370491 5455150 Plav_2189 Parvibaculum lavamentivorans DS-1 phosphatidylethanolamine N-methyltransferase YP_001413460.1 2369802 D 402881 CDS YP_001413461.1 154252637 5456870 2370838..2371455 1 NC_009719.1 KEGG: shw:Sputw3181_3583 hypothetical protein; hypothetical protein 2371455 5456870 Plav_2190 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413461.1 2370838 D 402881 CDS YP_001413462.1 154252638 5454728 2371576..2371830 1 NC_009719.1 hypothetical protein 2371830 5454728 Plav_2191 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413462.1 2371576 D 402881 CDS YP_001413463.1 154252639 5456831 complement(2371827..2372507) 1 NC_009719.1 PFAM: pseudouridine synthase; KEGG: mmr:Mmar10_0793 pseudouridine synthase; pseudouridine synthase 2372507 5456831 Plav_2192 Parvibaculum lavamentivorans DS-1 pseudouridine synthase YP_001413463.1 2371827 R 402881 CDS YP_001413464.1 154252640 5456598 complement(2372514..2372735) 1 NC_009719.1 PFAM: SlyX family protein; KEGG: rpc:RPC_1351 SlyX; SlyX family protein 2372735 5456598 Plav_2193 Parvibaculum lavamentivorans DS-1 SlyX family protein YP_001413464.1 2372514 R 402881 CDS YP_001413465.1 154252641 5456194 complement(2372732..2373022) 1 NC_009719.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: dar:Daro_2472 excinuclease ABC, C subunit, N-terminal; excinuclease ABC subunit C 2373022 5456194 Plav_2194 Parvibaculum lavamentivorans DS-1 excinuclease ABC subunit C YP_001413465.1 2372732 R 402881 CDS YP_001413466.1 154252642 5455768 2373298..2373906 1 NC_009719.1 PFAM: Exopolysaccharide synthesis ExoD; KEGG: mes:Meso_1827 exopolysaccharide synthesis, ExoD; exopolysaccharide synthesis ExoD 2373906 5455768 Plav_2195 Parvibaculum lavamentivorans DS-1 exopolysaccharide synthesis ExoD YP_001413466.1 2373298 D 402881 CDS YP_001413467.1 154252643 5455352 complement(2373912..2374538) 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: psb:Psyr_1175 glutathione S-transferase, N-terminal:glutathione S-transferase, C-terminal; glutathione S-transferase domain-containing protein 2374538 5455352 Plav_2196 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001413467.1 2373912 R 402881 CDS YP_001413468.1 154252644 5456407 complement(2374853..2375833) 1 NC_009719.1 KEGG: noc:Noc_2028 hypothetical protein; hypothetical protein 2375833 5456407 Plav_2197 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413468.1 2374853 R 402881 CDS YP_001413469.1 154252645 5454620 complement(2375830..2377122) 1 NC_009719.1 PFAM: protein of unknown function DUF323; KEGG: nca:Noca_1640 protein of unknown function DUF323; hypothetical protein 2377122 5454620 Plav_2198 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413469.1 2375830 R 402881 CDS YP_001413470.1 154252646 5453696 complement(2377310..2377513) 1 NC_009719.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: nha:Nham_2034 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 2377513 5453696 Plav_2199 Parvibaculum lavamentivorans DS-1 cold-shock DNA-binding domain-containing protein YP_001413470.1 2377310 R 402881 CDS YP_001413471.1 154252647 5454458 complement(2377751..2378200) 1 NC_009719.1 hypothetical protein 2378200 5454458 Plav_2200 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413471.1 2377751 R 402881 CDS YP_001413472.1 154252648 5453397 complement(2378225..2378485) 1 NC_009719.1 hypothetical protein 2378485 5453397 Plav_2201 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413472.1 2378225 R 402881 CDS YP_001413473.1 154252649 5453374 complement(2378567..2379538) 1 NC_009719.1 PFAM: high-affinity nickel-transporter; KEGG: sme:SMc02986 hypothetical protein; high-affinity nickel-transporter 2379538 5453374 Plav_2202 Parvibaculum lavamentivorans DS-1 high-affinity nickel-transporter YP_001413473.1 2378567 R 402881 CDS YP_001413474.1 154252650 5453888 complement(2379565..2380239) 1 NC_009719.1 PFAM: protein of unknown function DUF1007; KEGG: rpb:RPB_4544 protein of unknown function DUF1007; hypothetical protein 2380239 5453888 Plav_2203 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413474.1 2379565 R 402881 CDS YP_001413475.1 154252651 5454201 complement(2380255..2381394) 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rpb:RPB_4674 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 2381394 5454201 Plav_2204 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001413475.1 2380255 R 402881 CDS YP_001413476.1 154252652 5455096 complement(2381479..2382672) 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: hne:HNE_3080 acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein 2382672 5455096 Plav_2205 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001413476.1 2381479 R 402881 CDS YP_001413477.1 154252653 5455036 complement(2382880..2384490) 1 NC_009719.1 activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence; acyl-CoA synthetase 2384490 5455036 Plav_2206 Parvibaculum lavamentivorans DS-1 acyl-CoA synthetase YP_001413477.1 2382880 R 402881 CDS YP_001413478.1 154252654 5454406 complement(2384623..2385507) 1 NC_009719.1 hypothetical protein 2385507 5454406 Plav_2207 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413478.1 2384623 R 402881 CDS YP_001413479.1 154252655 5455911 complement(2385592..2386200) 1 NC_009719.1 KEGG: nar:Saro_2258 protein of unknown function UPF0191; hypothetical protein 2386200 5455911 Plav_2208 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413479.1 2385592 R 402881 CDS YP_001413480.1 154252656 5456454 2386349..2386966 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: rxy:Rxyl_1811 transcriptional regulator, TetR family; TetR family transcriptional regulator 2386966 5456454 Plav_2209 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001413480.1 2386349 D 402881 CDS YP_001413481.1 154252657 5453837 2386996..2388231 1 NC_009719.1 KEGG: hypothetical protein; hypothetical protein 2388231 5453837 Plav_2210 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413481.1 2386996 D 402881 CDS YP_001413482.1 154252658 5454306 2388331..2389143 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: plu:plu2437 hypothetical protein; alpha/beta hydrolase fold protein 2389143 5454306 Plav_2211 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001413482.1 2388331 D 402881 CDS YP_001413483.1 154252659 5454035 complement(2389146..2389658) 1 NC_009719.1 PFAM: response regulator receiver; KEGG: rpc:RPC_3108 response regulator receiver domain protein (CheY-like); response regulator receiver protein 2389658 5454035 Plav_2212 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001413483.1 2389146 R 402881 CDS YP_001413484.1 154252660 5453483 complement(2389655..2390200) 1 NC_009719.1 KEGG: nwi:Nwi_1333 Hpt protein; hypothetical protein 2390200 5453483 Plav_2213 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413484.1 2389655 R 402881 CDS YP_001413485.1 154252661 5454839 complement(2390213..2390710) 1 NC_009719.1 PFAM: response regulator receiver; KEGG: nha:Nham_1662 response regulator receiver domain protein (CheY-like); response regulator receiver protein 2390710 5454839 Plav_2214 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001413485.1 2390213 R 402881 CDS YP_001413486.1 154252662 5455550 complement(2390859..2391725) 1 NC_009719.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bra:BRADO4190 putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase; type 11 methyltransferase 2391725 5455550 Plav_2215 Parvibaculum lavamentivorans DS-1 type 11 methyltransferase YP_001413486.1 2390859 R 402881 CDS YP_001413487.1 154252663 5455160 complement(2391916..2392704) 1 NC_009719.1 KEGG: rru:Rru_A3292 hypothetical protein; hypothetical protein 2392704 5455160 Plav_2216 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413487.1 2391916 R 402881 CDS YP_001413488.1 154252664 5456492 2392813..2393289 1 NC_009719.1 PFAM: NUDIX hydrolase; KEGG: nha:Nham_3259 NUDIX hydrolase; NUDIX hydrolase 2393289 5456492 Plav_2217 Parvibaculum lavamentivorans DS-1 NUDIX hydrolase YP_001413488.1 2392813 D 402881 CDS YP_001413489.1 154252665 5455972 2393368..2393733 1 NC_009719.1 hypothetical protein 2393733 5455972 Plav_2218 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413489.1 2393368 D 402881 CDS YP_001413490.1 154252666 5453527 2393769..2394041 1 NC_009719.1 KEGG: bov:BOV_1568 hypothetical protein; hypothetical protein 2394041 5453527 Plav_2219 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413490.1 2393769 D 402881 CDS YP_001413491.1 154252667 5454651 complement(2394042..2395043) 1 NC_009719.1 KEGG: sme:SMc02708 putative glutathione S-transferase; putative glutathione S-transferase 2395043 5454651 Plav_2220 Parvibaculum lavamentivorans DS-1 putative glutathione S-transferase YP_001413491.1 2394042 R 402881 CDS YP_001413492.1 154252668 5455834 complement(2395067..2395777) 1 NC_009719.1 PFAM: Pirin domain protein; KEGG: conserved hypothetical protein; pirin domain-containing protein 2395777 5455834 Plav_2221 Parvibaculum lavamentivorans DS-1 pirin domain-containing protein YP_001413492.1 2395067 R 402881 CDS YP_001413493.1 154252669 5454895 complement(2395901..2396512) 1 NC_009719.1 TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: acr:Acry_2002 flavoprotein WrbA; flavoprotein WrbA 2396512 5454895 Plav_2222 Parvibaculum lavamentivorans DS-1 flavoprotein WrbA YP_001413493.1 2395901 R 402881 CDS YP_001413494.1 154252670 5454104 2396631..2397563 1 NC_009719.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rru:Rru_A2257 transcriptional regulator, LysR family; LysR family transcriptional regulator 2397563 5454104 Plav_2223 Parvibaculum lavamentivorans DS-1 LysR family transcriptional regulator YP_001413494.1 2396631 D 402881 CDS YP_001413495.1 154252671 5456767 complement(2397576..2398880) 1 NC_009719.1 hypothetical protein 2398880 5456767 Plav_2224 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413495.1 2397576 R 402881 CDS YP_001413496.1 154252672 5453720 complement(2398999..2399913) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hne:HNE_3099 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 2399913 5453720 Plav_2225 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001413496.1 2398999 R 402881 CDS YP_001413497.1 154252673 5456675 2400279..2400806 1 NC_009719.1 KEGG: rpc:RPC_1384 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2400806 5456675 Plav_2226 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001413497.1 2400279 D 402881 CDS YP_001413498.1 154252674 5455387 complement(2400839..2401822) 1 NC_009719.1 PFAM: periplasmic solute binding protein; KEGG: bbr:BB0185 putative periplasmic solute binding protein; periplasmic solute-binding protein 2401822 5455387 Plav_2227 Parvibaculum lavamentivorans DS-1 periplasmic solute-binding protein YP_001413498.1 2400839 R 402881 CDS YP_001413499.1 154252675 5457031 complement(2401835..2402704) 1 NC_009719.1 PFAM: ABC-3 protein; KEGG: pst:PSPTO_2634 cation ABC transporter, permease protein; ABC-3 protein 2402704 5457031 Plav_2228 Parvibaculum lavamentivorans DS-1 ABC-3 protein YP_001413499.1 2401835 R 402881 CDS YP_001413500.1 154252676 5455198 complement(2402701..2403438) 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psp:PSPPH_2501 cation ABC transporter, ATP-binding protein; ABC transporter-like protein 2403438 5455198 Plav_2229 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001413500.1 2402701 R 402881 CDS YP_001413501.1 154252677 5456597 complement(2403646..2403966) 1 NC_009719.1 PFAM: protein of unknown function UPF0060; KEGG: nwi:Nwi_1459 hypothetical protein; hypothetical protein 2403966 5456597 Plav_2230 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413501.1 2403646 R 402881 CDS YP_001413502.1 154252678 5456910 complement(2403998..2406073) 1 NC_009719.1 KEGG: rpd:RPD_1292 hypothetical protein; hypothetical protein 2406073 5456910 Plav_2231 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413502.1 2403998 R 402881 CDS YP_001413503.1 154252679 5454231 complement(2406085..2408904) 1 NC_009719.1 TIGRFAM: conserved hypothetical membrane protein; KEGG: rpc:RPC_0914 double-transmembrane region-like; hypothetical protein 2408904 5454231 Plav_2232 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413503.1 2406085 R 402881 CDS YP_001413504.1 154252680 5456264 complement(2408908..2409870) 1 NC_009719.1 PFAM: protein of unknown function DUF58; KEGG: mag:amb3863 hypothetical protein; hypothetical protein 2409870 5456264 Plav_2233 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413504.1 2408908 R 402881 CDS YP_001413505.1 154252681 5454354 complement(2409884..2410933) 1 NC_009719.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: mag:amb4161 MoxR-like ATPase; ATPase 2410933 5454354 Plav_2234 Parvibaculum lavamentivorans DS-1 ATPase YP_001413505.1 2409884 R 402881 CDS YP_001413506.1 154252682 5454210 2411046..2411696 1 NC_009719.1 PFAM: protein of unknown function DUF1285; KEGG: psb:Psyr_1659 protein of unknown function DUF1285; hypothetical protein 2411696 5454210 Plav_2235 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413506.1 2411046 D 402881 CDS YP_001413507.1 154252683 5453357 2411693..2412343 1 NC_009719.1 PFAM: NUDIX hydrolase; KEGG: mmr:Mmar10_0727 NUDIX hydrolase; NUDIX hydrolase 2412343 5453357 Plav_2236 Parvibaculum lavamentivorans DS-1 NUDIX hydrolase YP_001413507.1 2411693 D 402881 CDS YP_001413508.1 154252684 5454237 2412432..2413685 1 NC_009719.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: tRNA nucleotidyltransferase (CCA-adding enzyme); polynucleotide adenylyltransferase 2413685 5454237 Plav_2237 Parvibaculum lavamentivorans DS-1 polynucleotide adenylyltransferase YP_001413508.1 2412432 D 402881 CDS YP_001413509.1 154252685 5454837 2413758..2414306 1 NC_009719.1 hypothetical protein 2414306 5454837 Plav_2238 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413509.1 2413758 D 402881 CDS YP_001413510.1 154252686 5455363 2414306..2414851 1 NC_009719.1 KEGG: yen:YE1502 putative lipoprotein; hypothetical protein 2414851 5455363 Plav_2239 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413510.1 2414306 D 402881 CDS YP_001413511.1 154252687 5454791 complement(2414975..2415889) 1 NC_009719.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 2415889 5454791 Plav_2240 Parvibaculum lavamentivorans DS-1 coproporphyrinogen III oxidase YP_001413511.1 2414975 R 402881 CDS YP_001413512.1 154252688 5454582 complement(2415925..2416452) 1 NC_009719.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: spoU rRNA methylase family protein; tRNA/rRNA methyltransferase SpoU 2416452 5454582 Plav_2241 Parvibaculum lavamentivorans DS-1 tRNA/rRNA methyltransferase SpoU YP_001413512.1 2415925 R 402881 CDS YP_001413513.1 154252689 5456948 2416708..2417247 1 NC_009719.1 TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: bbt:BBta_p0097 ubiquinol-cytochrome c reductase iron-sulfur subunit; ubiquinol-cytochrome c reductase, iron-sulfur subunit 2417247 5456948 Plav_2242 Parvibaculum lavamentivorans DS-1 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_001413513.1 2416708 D 402881 CDS YP_001413514.1 154252690 5455683 2417262..2418539 1 NC_009719.1 PFAM: Cytochrome b/b6 domain; KEGG: ubiquinol-cytochrome c reductase cytochrome b subunit; cytochrome b/b6 domain-containing protein 2418539 5455683 Plav_2243 Parvibaculum lavamentivorans DS-1 cytochrome b/b6 domain-containing protein YP_001413514.1 2417262 D 402881 CDS YP_001413515.1 154252691 5456038 2418564..2419352 1 NC_009719.1 PFAM: cytochrome c1; KEGG: bja:blr2486 cytochrome b/c1 precursor; cytochrome c1 2419352 5456038 Plav_2244 Parvibaculum lavamentivorans DS-1 cytochrome c1 YP_001413515.1 2418564 D 402881 CDS YP_001413516.1 154252692 5456919 2419462..2420355 1 NC_009719.1 TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine phosphorylase family 2; KEGG: gbe:GbCGDNIH1_1721 5'-methylthioadenosine phosphorylase; methylthioadenosine phosphorylase 2420355 5456919 Plav_2245 Parvibaculum lavamentivorans DS-1 methylthioadenosine phosphorylase YP_001413516.1 2419462 D 402881 CDS YP_001413517.1 154252693 5456212 2420365..2420892 1 NC_009719.1 TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: bbt:BBta_2310 adenine phosphoribosyltransferase; adenine phosphoribosyltransferase 2420892 5456212 Plav_2246 Parvibaculum lavamentivorans DS-1 adenine phosphoribosyltransferase YP_001413517.1 2420365 D 402881 CDS YP_001413518.1 154252694 5455843 2420915..2422009 1 NC_009719.1 TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; KEGG: mag:amb4123 methylthioribose-1-phosphate isomerase; eIF-2B alpha/beta/delta-like protein 2422009 5455843 Plav_2247 Parvibaculum lavamentivorans DS-1 eIF-2B alpha/beta/delta-like protein YP_001413518.1 2420915 D 402881 CDS YP_001413519.1 154252695 5454943 2422006..2422656 1 NC_009719.1 PFAM: class II aldolase/adducin family protein; KEGG: rru:Rru_A0359 class II aldolase/adducin-like; class II aldolase/adducin family protein 2422656 5454943 Plav_2248 Parvibaculum lavamentivorans DS-1 class II aldolase/adducin family protein YP_001413519.1 2422006 D 402881 CDS YP_001413520.1 154252696 5454565 complement(2422833..2423321) 1 NC_009719.1 PFAM: glutathione peroxidase; KEGG: mag:amb3627 phospholipid hydroperoxide glutathione peroxidase; glutathione peroxidase 2423321 5454565 Plav_2249 Parvibaculum lavamentivorans DS-1 glutathione peroxidase YP_001413520.1 2422833 R 402881 CDS YP_001413521.1 154252697 5454984 complement(2423348..2423770) 1 NC_009719.1 PFAM: OsmC family protein; KEGG: bja:bll0735 organic hydroperoxide resistance protein; OsmC family protein 2423770 5454984 Plav_2250 Parvibaculum lavamentivorans DS-1 OsmC family protein YP_001413521.1 2423348 R 402881 CDS YP_001413522.1 154252698 5454473 complement(2423981..2424418) 1 NC_009719.1 PFAM: regulatory protein MarR; KEGG: rfr:Rfer_0573 transcriptional regulator, MarR family; MarR family transcriptional regulator 2424418 5454473 Plav_2251 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001413522.1 2423981 R 402881 CDS YP_001413523.1 154252699 5453873 complement(2424659..2425348) 1 NC_009719.1 PFAM: dienelactone hydrolase; KEGG: sal:Sala_2285 carboxymethylenebutenolidase; dienelactone hydrolase 2425348 5453873 Plav_2252 Parvibaculum lavamentivorans DS-1 dienelactone hydrolase YP_001413523.1 2424659 R 402881 CDS YP_001413524.1 154252700 5456354 complement(2425395..2425877) 1 NC_009719.1 PFAM: MaoC domain protein dehydratase; KEGG: nwi:Nwi_2507 MaoC-like dehydratase; dehydratase 2425877 5456354 Plav_2253 Parvibaculum lavamentivorans DS-1 dehydratase YP_001413524.1 2425395 R 402881 CDS YP_001413525.1 154252701 5456872 complement(2425877..2426353) 1 NC_009719.1 PFAM: MaoC domain protein dehydratase; KEGG: mpt:Mpe_A3698 MaoC-related protein; dehydratase 2426353 5456872 Plav_2254 Parvibaculum lavamentivorans DS-1 dehydratase YP_001413525.1 2425877 R 402881 CDS YP_001413526.1 154252702 5453349 complement(2426586..2427695) 1 NC_009719.1 TIGRFAM: GTP-binding protein YchF; PFAM: GTP-binding protein HSR1-related; Protein of unknown function DUF933; KEGG: bja:bll7439 GTP-binding protein; GTP-binding protein YchF 2427695 5453349 Plav_2255 Parvibaculum lavamentivorans DS-1 GTP-binding protein YchF YP_001413526.1 2426586 R 402881 CDS YP_001413527.1 154252703 5457004 complement(2427699..2428316) 1 NC_009719.1 PFAM: peptidyl-tRNA hydrolase; KEGG: bja:bll7440 peptidyl-tRNA hydrolase; aminoacyl-tRNA hydrolase 2428316 5457004 Plav_2256 Parvibaculum lavamentivorans DS-1 aminoacyl-tRNA hydrolase YP_001413527.1 2427699 R 402881 CDS YP_001413528.1 154252704 5455286 complement(2428343..2428993) 1 NC_009719.1 TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: mes:Meso_2157 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 2428993 5455286 Plav_2257 Parvibaculum lavamentivorans DS-1 ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 YP_001413528.1 2428343 R 402881 CDS YP_001413529.1 154252705 5456523 complement(2429144..2430079) 1 NC_009719.1 TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; KEGG: mes:Meso_2155 ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase 2430079 5456523 Plav_2258 Parvibaculum lavamentivorans DS-1 ribose-phosphate pyrophosphokinase YP_001413529.1 2429144 R 402881 CDS YP_001413530.1 154252706 5456686 complement(2430226..2431248) 1 NC_009719.1 KEGG: mag:amb0592 hypothetical protein; hypothetical protein 2431248 5456686 Plav_2259 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413530.1 2430226 R 402881 CDS YP_001413531.1 154252707 5455569 complement(2431331..2432098) 1 NC_009719.1 PFAM: protein of unknown function DUF152; KEGG: mes:Meso_2152 protein of unknown function DUF152; hypothetical protein 2432098 5455569 Plav_2260 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413531.1 2431331 R 402881 CDS YP_001413532.1 154252708 5455484 complement(2432110..2433180) 1 NC_009719.1 PFAM: protein of unknown function DUF185; KEGG: mag:amb0594 hypothetical protein; hypothetical protein 2433180 5455484 Plav_2261 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413532.1 2432110 R 402881 CDS YP_001413533.1 154252709 5454043 complement(2433177..2434007) 1 NC_009719.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mes:Meso_2150 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 2434007 5454043 Plav_2262 Parvibaculum lavamentivorans DS-1 prolipoprotein diacylglyceryl transferase YP_001413533.1 2433177 R 402881 CDS YP_001413534.1 154252710 5455162 2434160..2434489 1 NC_009719.1 PFAM: protein of unknown function DUF526; KEGG: rpb:RPB_4162 protein of unknown function DUF526; hypothetical protein 2434489 5455162 Plav_2263 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413534.1 2434160 D 402881 CDS YP_001413535.1 154252711 5455922 2434668..2435171 1 NC_009719.1 PFAM: Protein of unknown function DUF1790; KEGG: rpc:RPC_1407 hypothetical protein; hypothetical protein 2435171 5455922 Plav_2264 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413535.1 2434668 D 402881 CDS YP_001413536.1 154252712 5456177 2435162..2436043 1 NC_009719.1 TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rsh:Rsph17029_3009 pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 2436043 5456177 Plav_2265 Parvibaculum lavamentivorans DS-1 pyrroline-5-carboxylate reductase YP_001413536.1 2435162 D 402881 CDS YP_001413537.1 154252713 5456281 2436102..2436716 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: rru:Rru_A3282 hypothetical protein; regulatory protein TetR 2436716 5456281 Plav_2266 Parvibaculum lavamentivorans DS-1 regulatory protein TetR YP_001413537.1 2436102 D 402881 CDS YP_001413538.1 154252714 5453482 complement(2436720..2437091) 1 NC_009719.1 KEGG: mxa:MXAN_2409 hypothetical protein; hypothetical protein 2437091 5453482 Plav_2267 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413538.1 2436720 R 402881 CDS YP_001413539.1 154252715 5454368 complement(2437177..2438583) 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpc:RPC_1385 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2438583 5454368 Plav_2268 Parvibaculum lavamentivorans DS-1 integral membrane sensor signal transduction histidine kinase YP_001413539.1 2437177 R 402881 CDS YP_001413540.1 154252716 5455624 complement(2438594..2439325) 1 NC_009719.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpa:RPA4368 two-component transcriptional regulator, winged helix family; two component transcriptional regulator 2439325 5455624 Plav_2269 Parvibaculum lavamentivorans DS-1 two component transcriptional regulator YP_001413540.1 2438594 R 402881 CDS YP_001413541.1 154252717 5455427 complement(2439355..2439873) 1 NC_009719.1 PFAM: regulatory protein MarR; KEGG: mag:amb0550 transcriptional regulator; MarR family transcriptional regulator 2439873 5455427 Plav_2270 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001413541.1 2439355 R 402881 CDS YP_001413542.1 154252718 5455493 2440104..2441003 1 NC_009719.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 2441003 5455493 Plav_2271 Parvibaculum lavamentivorans DS-1 branched-chain amino acid aminotransferase YP_001413542.1 2440104 D 402881 CDS YP_001413543.1 154252719 5456871 complement(2441059..2441484) 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: rpd:RPD_1883 phenylacetic acid degradation-related protein; thioesterase superfamily protein 2441484 5456871 Plav_2272 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001413543.1 2441059 R 402881 CDS YP_001413544.1 154252720 5456129 complement(2441621..2442061) 1 NC_009719.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: mlo:mlr7915 molybdopterin converting factor, subunit 2; molybdopterin biosynthesis protein MoaE 2442061 5456129 Plav_2273 Parvibaculum lavamentivorans DS-1 molybdopterin biosynthesis protein MoaE YP_001413544.1 2441621 R 402881 CDS YP_001413545.1 154252721 5454575 complement(2442066..2442317) 1 NC_009719.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: bbt:BBta_1725 molybdenum cofactor biosynthesis protein D; molybdopterin converting factor subunit 1 2442317 5454575 Plav_2274 Parvibaculum lavamentivorans DS-1 molybdopterin converting factor subunit 1 YP_001413545.1 2442066 R 402881 CDS YP_001413546.1 154252722 5454422 complement(2442314..2442937) 1 NC_009719.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sme:SMc00601 probable CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase transmembrane protein; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2442937 5454422 Plav_2275 Parvibaculum lavamentivorans DS-1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001413546.1 2442314 R 402881 CDS YP_001413547.1 154252723 5456345 complement(2443012..2444946) 1 NC_009719.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: Excinuclease ABC C subunit domain protein; helix-hairpin-helix motif; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Helix-hairpin-helix DNA-binding class 1; KEGG: mes:Meso_1975 excinuclease ABC, C subunit; excinuclease ABC subunit C 2444946 5456345 Plav_2276 Parvibaculum lavamentivorans DS-1 excinuclease ABC subunit C YP_001413547.1 2443012 R 402881 CDS YP_001413548.1 154252724 5455252 complement(2445321..2445728) 1 NC_009719.1 TIGRFAM: dihydroneopterin aldolase; KEGG: rru:Rru_A2219 dihydroneopterin aldolase family; dihydroneopterin aldolase 2445728 5455252 Plav_2277 Parvibaculum lavamentivorans DS-1 dihydroneopterin aldolase YP_001413548.1 2445321 R 402881 CDS YP_001413549.1 154252725 5454884 complement(2445739..2446509) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rru:Rru_A2218 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2446509 5454884 Plav_2278 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001413549.1 2445739 R 402881 CDS YP_001413550.1 154252726 5455783 complement(2446521..2447573) 1 NC_009719.1 TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: jan:Jann_3921 K+-dependent Na+/Ca+ exchanger related-protein; CaCA family Na(+)/Ca(+) antiporter 2447573 5455783 Plav_2279 Parvibaculum lavamentivorans DS-1 CaCA family Na(+)/Ca(+) antiporter YP_001413550.1 2446521 R 402881 CDS YP_001413551.1 154252727 5454464 2447811..2449583 1 NC_009719.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: sde:Sde_1457 K+ efflux antiporter, putative (KEA1); sodium/hydrogen exchanger 2449583 5454464 Plav_2280 Parvibaculum lavamentivorans DS-1 sodium/hydrogen exchanger YP_001413551.1 2447811 D 402881 CDS YP_001413552.1 154252728 5455891 complement(2449586..2449939) 1 NC_009719.1 PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: mlo:mlr8466 hypothetical protein; hypothetical protein 2449939 5455891 Plav_2281 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413552.1 2449586 R 402881 CDS YP_001413553.1 154252729 5454967 2450070..2451290 1 NC_009719.1 KEGG: nha:Nham_2462 hypothetical protein; hypothetical protein 2451290 5454967 Plav_2282 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413553.1 2450070 D 402881 CDS YP_001413554.1 154252730 5453739 complement(2451294..2451848) 1 NC_009719.1 KEGG: dge:Dgeo_1743 short chain dehydrogenase; short chain dehydrogenase 2451848 5453739 Plav_2283 Parvibaculum lavamentivorans DS-1 short chain dehydrogenase YP_001413554.1 2451294 R 402881 CDS YP_001413555.1 154252731 5453481 complement(2451866..2452204) 1 NC_009719.1 KEGG: aha:AHA_3401 hypothetical protein; hypothetical protein 2452204 5453481 Plav_2284 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413555.1 2451866 R 402881 CDS YP_001413556.1 154252732 5455157 complement(2452275..2452775) 1 NC_009719.1 KEGG: bja:bll7605 hypothetical protein; hypothetical protein 2452775 5455157 Plav_2285 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413556.1 2452275 R 402881 CDS YP_001413557.1 154252733 5456152 2452907..2453314 1 NC_009719.1 hypothetical protein 2453314 5456152 Plav_2286 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413557.1 2452907 D 402881 CDS YP_001413558.1 154252734 5454539 2453476..2454879 1 NC_009719.1 KEGG: plt:Plut_1873 hypothetical protein; hypothetical protein 2454879 5454539 Plav_2287 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413558.1 2453476 D 402881 CDS YP_001413559.1 154252735 5454425 complement(2455577..2457892) 1 NC_009719.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 2457892 5454425 Plav_2288 Parvibaculum lavamentivorans DS-1 excinuclease ABC subunit B YP_001413559.1 2455577 R 402881 CDS YP_001413560.1 154252736 5456268 complement(2457975..2458229) 1 NC_009719.1 hypothetical protein 2458229 5456268 Plav_2289 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413560.1 2457975 R 402881 CDS YP_001413561.1 154252737 5455836 2458355..2458831 1 NC_009719.1 hypothetical protein 2458831 5455836 Plav_2290 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413561.1 2458355 D 402881 CDS YP_001413562.1 154252738 5455419 2458828..2459619 1 NC_009719.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: hma:rrnAC0720 hypothetical protein; hypothetical protein 2459619 5455419 Plav_2291 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413562.1 2458828 D 402881 CDS YP_001413563.1 154252739 5454090 complement(2459622..2460248) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: pfl:PFL_4531 transcriptional regulator, TetR family; TetR family transcriptional regulator 2460248 5454090 Plav_2292 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001413563.1 2459622 R 402881 CDS YP_001413564.1 154252740 5454679 complement(2460274..2460888) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: bvi:Bcep1808_5478 transcriptional regulator, TetR family; TetR family transcriptional regulator 2460888 5454679 Plav_2293 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001413564.1 2460274 R 402881 CDS YP_001413565.1 154252741 5453672 complement(2461067..2461666) 1 NC_009719.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: sde:Sde_0123 sortase (surface protein transpeptidase)-like; sortase family protein 2461666 5453672 Plav_2294 Parvibaculum lavamentivorans DS-1 sortase family protein YP_001413565.1 2461067 R 402881 CDS YP_001413566.1 154252742 5456225 complement(2461687..2463954) 1 NC_009719.1 PFAM: Vault protein inter-alpha-trypsin domain protein; SMART: von Willebrand factor type A; Vault protein inter-alpha-trypsin, metazoa; KEGG: ret:RHE_CH03000 hypothetical protein; vault protein inter-alpha-trypsin subunit 2463954 5456225 Plav_2295 Parvibaculum lavamentivorans DS-1 vault protein inter-alpha-trypsin subunit YP_001413566.1 2461687 R 402881 CDS YP_001413567.1 154252743 5454914 complement(2464095..2464709) 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: pfl:PFL_4361 glutathione S-transferase; glutathione S-transferase domain-containing protein 2464709 5454914 Plav_2296 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001413567.1 2464095 R 402881 CDS YP_001413568.1 154252744 5456484 complement(2464720..2466225) 1 NC_009719.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rxy:Rxyl_0136 transcriptional regulator, GntR family; GntR family transcriptional regulator 2466225 5456484 Plav_2297 Parvibaculum lavamentivorans DS-1 GntR family transcriptional regulator YP_001413568.1 2464720 R 402881 CDS YP_001413569.1 154252745 5454581 2466329..2466508 1 NC_009719.1 KEGG: eli:ELI_10250 hypothetical protein; hypothetical protein 2466508 5454581 Plav_2298 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413569.1 2466329 D 402881 CDS YP_001413570.1 154252746 5454358 2466521..2467153 1 NC_009719.1 KEGG: rso:RSc3120 hypothetical protein; hypothetical protein 2467153 5454358 Plav_2299 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413570.1 2466521 D 402881 CDS YP_001413571.1 154252747 5457037 2467250..2468452 1 NC_009719.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 2468452 5457037 Plav_2300 Parvibaculum lavamentivorans DS-1 aspartate aminotransferase YP_001413571.1 2467250 D 402881 CDS YP_001413572.1 154252748 5456917 complement(2468506..2469318) 1 NC_009719.1 PFAM: peptidase M48 Ste24p; KEGG: mmr:Mmar10_1850 peptidase M48, Ste24p; peptidase M48 Ste24p 2469318 5456917 Plav_2301 Parvibaculum lavamentivorans DS-1 peptidase M48 Ste24p YP_001413572.1 2468506 R 402881 CDS YP_001413573.1 154252749 5453471 2469483..2469950 1 NC_009719.1 PFAM: Ferritin Dps family protein; KEGG: mfa:Mfla_1120 ferritin and Dps; ferritin Dps family protein 2469950 5453471 Plav_2302 Parvibaculum lavamentivorans DS-1 ferritin Dps family protein YP_001413573.1 2469483 D 402881 CDS YP_001413574.1 154252750 5455609 2469991..2470683 1 NC_009719.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mlo:mll5344 hypothetical protein; HAD family hydrolase 2470683 5455609 Plav_2303 Parvibaculum lavamentivorans DS-1 HAD family hydrolase YP_001413574.1 2469991 D 402881 CDS YP_001413575.1 154252751 5454687 complement(2470680..2471606) 1 NC_009719.1 PFAM: sulfotransferase; KEGG: noc:Noc_0082 sulfotransferase; sulfotransferase 2471606 5454687 Plav_2304 Parvibaculum lavamentivorans DS-1 sulfotransferase YP_001413575.1 2470680 R 402881 CDS YP_001413576.1 154252752 5453387 complement(2471749..2472753) 1 NC_009719.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmr:Mmar10_2145 thioredoxin reductase; thioredoxin reductase 2472753 5453387 Plav_2305 Parvibaculum lavamentivorans DS-1 thioredoxin reductase YP_001413576.1 2471749 R 402881 CDS YP_001413577.1 154252753 5453344 complement(2472854..2473459) 1 NC_009719.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: tcx:Tcr_1387 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 2473459 5453344 Plav_2306 Parvibaculum lavamentivorans DS-1 alkyl hydroperoxide reductase YP_001413577.1 2472854 R 402881 CDS YP_001413578.1 154252754 5453426 2473803..2475599 1 NC_009719.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: azo:azo2598 conserved hypothetical secreted protein; hypothetical protein 2475599 5453426 Plav_2307 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413578.1 2473803 D 402881 CDS YP_001413579.1 154252755 5454673 complement(2475646..2477625) 1 NC_009719.1 KEGG: gbe:GbCGDNIH1_0635 hypothetical cytosolic protein; hypothetical protein 2477625 5454673 Plav_2308 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413579.1 2475646 R 402881 CDS YP_001413580.1 154252756 5455785 complement(2477661..2478440) 1 NC_009719.1 KEGG: acr:Acry_1264 hypothetical protein; hypothetical protein 2478440 5455785 Plav_2309 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413580.1 2477661 R 402881 CDS YP_001413581.1 154252757 5454320 complement(2478444..2479451) 1 NC_009719.1 PFAM: protein of unknown function DUF1022; KEGG: rru:Rru_A1980 protein of unknown function DUF1022; hypothetical protein 2479451 5454320 Plav_2310 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413581.1 2478444 R 402881 CDS YP_001413582.1 154252758 5455930 2479570..2480055 1 NC_009719.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sit:TM1040_0615 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 2480055 5455930 Plav_2311 Parvibaculum lavamentivorans DS-1 AsnC family transcriptional regulator YP_001413582.1 2479570 D 402881 CDS YP_001413583.1 154252759 5456049 complement(2480062..2480520) 1 NC_009719.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mes:Meso_2118 transcription elongation factor GreA; transcription elongation factor GreA 2480520 5456049 Plav_2312 Parvibaculum lavamentivorans DS-1 transcription elongation factor GreA YP_001413583.1 2480062 R 402881 CDS YP_001413584.1 154252760 5453824 complement(2480730..2483969) 1 NC_009719.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; RimK domain protein ATP-grasp; KEGG: mag:amb0702 carbamoylphosphate synthase large subunit; carbamoyl-phosphate synthase large subunit 2483969 5453824 Plav_2313 Parvibaculum lavamentivorans DS-1 carbamoyl-phosphate synthase large subunit YP_001413584.1 2480730 R 402881 CDS YP_001413585.1 154252761 5454561 complement(2484033..2485241) 1 NC_009719.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: rpa:RPA1276 carbamoyl-phosphate synthase small subunit; carbamoyl-phosphate synthase small subunit 2485241 5454561 Plav_2314 Parvibaculum lavamentivorans DS-1 carbamoyl-phosphate synthase small subunit YP_001413585.1 2484033 R 402881 CDS YP_001413586.1 154252762 5453674 2485598..2486062 1 NC_009719.1 PFAM: GatB/Yqey domain protein; KEGG: rru:Rru_A2884 GatB/YqeY; GatB/Yqey domain-containing protein 2486062 5453674 Plav_2315 Parvibaculum lavamentivorans DS-1 GatB/Yqey domain-containing protein YP_001413586.1 2485598 D 402881 CDS YP_001413587.1 154252763 5455510 2486138..2488039 1 NC_009719.1 TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein; KEGG: mes:Meso_1464 DNA primase; DNA primase 2488039 5455510 Plav_2316 Parvibaculum lavamentivorans DS-1 DNA primase YP_001413587.1 2486138 D 402881 CDS YP_001413588.1 154252764 5456851 2488356..2490326 1 NC_009719.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 2490326 5456851 Plav_2317 Parvibaculum lavamentivorans DS-1 RNA polymerase sigma factor RpoD YP_001413588.1 2488356 D 402881 CDS YP_001413589.1 154252765 5456081 complement(2490453..2491502) 1 NC_009719.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rfr:Rfer_1612 UbiE/COQ5 methyltransferase; type 11 methyltransferase 2491502 5456081 Plav_2318 Parvibaculum lavamentivorans DS-1 type 11 methyltransferase YP_001413589.1 2490453 R 402881 CDS YP_001413590.1 154252766 5454432 complement(2491581..2491874) 1 NC_009719.1 hypothetical protein 2491874 5454432 Plav_2319 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413590.1 2491581 R 402881 CDS YP_001413591.1 154252767 5456087 complement(2492031..2493149) 1 NC_009719.1 PFAM: ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_B2746 ThiJ/PfpI family protein; ThiJ/PfpI domain-containing protein 2493149 5456087 Plav_2320 Parvibaculum lavamentivorans DS-1 ThiJ/PfpI domain-containing protein YP_001413591.1 2492031 R 402881 CDS YP_001413592.1 154252768 5454071 complement(2493315..2494070) 1 NC_009719.1 PFAM: protein of unknown function DUF541; KEGG: mes:Meso_2073 protein of unknown function DUF541; hypothetical protein 2494070 5454071 Plav_2321 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413592.1 2493315 R 402881 CDS YP_001413593.1 154252769 5455867 2494704..2495258 1 NC_009719.1 TetR family transcriptional regulator 2495258 5455867 Plav_2322 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001413593.1 2494704 D 402881 CDS YP_001413594.1 154252770 5456460 complement(2495849..2496379) 1 NC_009719.1 KEGG: vei:Veis_2327 hypothetical protein; hypothetical protein 2496379 5456460 Plav_2323 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413594.1 2495849 R 402881 CDS YP_001413595.1 154252771 5456951 complement(2496425..2498251) 1 NC_009719.1 KEGG: rpe:RPE_2456 hypothetical protein; hypothetical protein 2498251 5456951 Plav_2324 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413595.1 2496425 R 402881 CDS YP_001413596.1 154252772 5455265 complement(2498450..2503798) 1 NC_009719.1 TIGRFAM: outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; KEGG: bam:Bamb_4364 outer membrane autotransporter barrel domain; outer membrane autotransporter 2503798 5455265 Plav_2325 Parvibaculum lavamentivorans DS-1 outer membrane autotransporter YP_001413596.1 2498450 R 402881 CDS YP_001413597.1 154252773 5455274 2503946..2504578 1 NC_009719.1 PFAM: regulatory protein LuxR; response regulator receiver; LexA DNA-binding domain protein; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: pde:Pden_4349 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 2504578 5455274 Plav_2326 Parvibaculum lavamentivorans DS-1 two component LuxR family transcriptional regulator YP_001413597.1 2503946 D 402881 CDS YP_001413598.1 154252774 5454715 complement(2504583..2506358) 1 NC_009719.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pmy:Pmen_4041 integral membrane sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase 2506358 5454715 Plav_2327 Parvibaculum lavamentivorans DS-1 integral membrane sensor hybrid histidine kinase YP_001413598.1 2504583 R 402881 CDS YP_001413599.1 154252775 5453566 complement(2506554..2508593) 1 NC_009719.1 hypothetical protein 2508593 5453566 Plav_2328 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413599.1 2506554 R 402881 CDS YP_001413600.1 154252776 5456218 complement(2508965..2510104) 1 NC_009719.1 hypothetical protein 2510104 5456218 Plav_2329 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413600.1 2508965 R 402881 CDS YP_001413601.1 154252777 5456883 2510371..2510901 1 NC_009719.1 hypothetical protein 2510901 5456883 Plav_2330 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413601.1 2510371 D 402881 CDS YP_001413602.1 154252778 5454724 complement(2510908..2511444) 1 NC_009719.1 hypothetical protein 2511444 5454724 Plav_2331 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413602.1 2510908 R 402881 CDS YP_001413603.1 154252779 5454427 complement(2511437..2512054) 1 NC_009719.1 hypothetical protein 2512054 5454427 Plav_2332 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413603.1 2511437 R 402881 CDS YP_001413604.1 154252780 5453407 complement(2513986..2514768) 1 NC_009719.1 KEGG: nwi:Nwi_2083 hypothetical protein; hypothetical protein 2514768 5453407 Plav_2335 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413604.1 2513986 R 402881 CDS YP_001413605.1 154252781 5455447 2514944..2515465 1 NC_009719.1 KEGG: bra:BRADO1453 hypothetical protein; hypothetical protein 2515465 5455447 Plav_2336 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413605.1 2514944 D 402881 CDS YP_001413606.1 154252782 5455978 2515462..2516151 1 NC_009719.1 KEGG: fjo:Fjoh_3632 hypothetical protein; hypothetical protein 2516151 5455978 Plav_2337 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413606.1 2515462 D 402881 CDS YP_001413607.1 154252783 5453485 2516208..2517107 1 NC_009719.1 KEGG: nha:Nham_4460 hypothetical protein; hypothetical protein 2517107 5453485 Plav_2338 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413607.1 2516208 D 402881 CDS YP_001413608.1 154252784 5454623 2517277..2517909 1 NC_009719.1 PFAM: integrase family protein; KEGG: rsh:Rsph17029_2267 phage integrase family protein; integrase family protein 2517909 5454623 Plav_2339 Parvibaculum lavamentivorans DS-1 integrase family protein YP_001413608.1 2517277 D 402881 CDS YP_001413609.1 154252785 5455329 2518208..2519479 1 NC_009719.1 PFAM: metallophosphoesterase; KEGG: bam:Bamb_5979 metallophosphoesterase; metallophosphoesterase 2519479 5455329 Plav_2340 Parvibaculum lavamentivorans DS-1 metallophosphoesterase YP_001413609.1 2518208 D 402881 CDS YP_001413610.1 154252786 5456656 2519482..2523042 1 NC_009719.1 KEGG: bcn:Bcen_5856 hypothetical protein; hypothetical protein 2523042 5456656 Plav_2341 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413610.1 2519482 D 402881 CDS YP_001413611.1 154252787 5456468 complement(2523100..2524182) 1 NC_009719.1 KEGG: pin:Ping_2566 hypothetical protein; hypothetical protein 2524182 5456468 Plav_2342 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413611.1 2523100 R 402881 CDS YP_001413612.1 154252788 5456788 complement(2524463..2525179) 1 NC_009719.1 PFAM: protein of unknown function DUF45; KEGG: mca:MCA1894 hypothetical protein; hypothetical protein 2525179 5456788 Plav_2343 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413612.1 2524463 R 402881 CDS YP_001413613.1 154252789 5456649 complement(2525176..2528313) 1 NC_009719.1 TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; KEGG: mca:MCA1893 type I restriction-modification system, R subunit; HsdR family type I site-specific deoxyribonuclease 2528313 5456649 Plav_2344 Parvibaculum lavamentivorans DS-1 HsdR family type I site-specific deoxyribonuclease YP_001413613.1 2525176 R 402881 CDS YP_001413614.1 154252790 5455508 complement(2528388..2529236) 1 NC_009719.1 KEGG: nwi:Nwi_3122 hypothetical protein; hypothetical protein 2529236 5455508 Plav_2345 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413614.1 2528388 R 402881 CDS YP_001413615.1 154252791 5453411 complement(2529248..2530426) 1 NC_009719.1 PFAM: restriction modification system DNA specificity domain; KEGG: lpc:LPC_2789 hypothetical protein; restriction modification system DNA specificity subunit 2530426 5453411 Plav_2346 Parvibaculum lavamentivorans DS-1 restriction modification system DNA specificity subunit YP_001413615.1 2529248 R 402881 CDS YP_001413616.1 154252792 5454225 complement(2530419..2531435) 1 NC_009719.1 KEGG: nwi:Nwi_3119 putative DNA-binding protein; putative DNA-binding protein 2531435 5454225 Plav_2347 Parvibaculum lavamentivorans DS-1 putative DNA-binding protein YP_001413616.1 2530419 R 402881 CDS YP_001413617.1 154252793 5456139 complement(2531428..2532945) 1 NC_009719.1 TIGRFAM: type I restriction-modification system, M subunit; PFAM: putative RNA methylase; N-6 DNA methylase; Eco57I restriction endonuclease; KEGG: mca:MCA1888 type I restriction-modification system, M subunit; type I restriction-modification system, M subunit 2532945 5456139 Plav_2348 Parvibaculum lavamentivorans DS-1 type I restriction-modification system, M subunit YP_001413617.1 2531428 R 402881 CDS YP_001413618.1 154252794 5453903 complement(2532942..2533547) 1 NC_009719.1 KEGG: mca:MCA1886 hypothetical protein; hypothetical protein 2533547 5453903 Plav_2349 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413618.1 2532942 R 402881 CDS YP_001413619.1 154252795 5455420 complement(2533663..2535450) 1 NC_009719.1 KEGG: bja:blr2300 hypothetical protein; hypothetical protein 2535450 5455420 Plav_2350 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413619.1 2533663 R 402881 CDS YP_001413620.1 154252796 5453849 complement(2535455..2536387) 1 NC_009719.1 KEGG: bja:blr2299 hypothetical protein; hypothetical protein 2536387 5453849 Plav_2351 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413620.1 2535455 R 402881 CDS YP_001413621.1 154252797 5455656 complement(2536380..2538545) 1 NC_009719.1 PFAM: Integrase catalytic region; KEGG: nha:Nham_1364 integrase, catalytic region; integrase catalytic subunit 2538545 5455656 Plav_2352 Parvibaculum lavamentivorans DS-1 integrase catalytic subunit YP_001413621.1 2536380 R 402881 CDS YP_001413622.1 154252798 5454904 complement(2538565..2539308) 1 NC_009719.1 KEGG: nha:Nham_1363 hypothetical protein; hypothetical protein 2539308 5454904 Plav_2353 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413622.1 2538565 R 402881 CDS YP_001413623.1 154252799 5455064 complement(2539878..2540798) 1 NC_009719.1 PFAM: beta-lactamase domain protein; KEGG: pfo:Pfl_2454 beta-lactamase-like; beta-lactamase domain-containing protein 2540798 5455064 Plav_2354 Parvibaculum lavamentivorans DS-1 beta-lactamase domain-containing protein YP_001413623.1 2539878 R 402881 CDS YP_001413624.1 154252800 5455766 2541164..2543872 1 NC_009719.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: ret:RHE_PF00222 probable two-component sensor histidine kinase protein; PAS/PAC sensor signal transduction histidine kinase 2543872 5455766 Plav_2355 Parvibaculum lavamentivorans DS-1 PAS/PAC sensor signal transduction histidine kinase YP_001413624.1 2541164 D 402881 CDS YP_001413625.1 154252801 5455983 2543869..2544516 1 NC_009719.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: ret:RHE_PF00223 two-component response regulator protein (NodW mutant supressor protein); response regulator receiver protein 2544516 5455983 Plav_2356 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001413625.1 2543869 D 402881 CDS YP_001413626.1 154252802 5455516 2544513..2544902 1 NC_009719.1 PFAM: response regulator receiver; KEGG: rle:pRL120791 putative two-component response regulator transcriptional regulatory protein; response regulator receiver protein 2544902 5455516 Plav_2357 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001413626.1 2544513 D 402881 CDS YP_001413627.1 154252803 5453925 2544892..2545593 1 NC_009719.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: ret:RHE_PF00225 probable two-component response regulator protein; response regulator receiver protein 2545593 5453925 Plav_2358 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001413627.1 2544892 D 402881 CDS YP_001413628.1 154252804 5454898 complement(2545788..2546999) 1 NC_009719.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bja:bll2792 NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2546999 5454898 Plav_2359 Parvibaculum lavamentivorans DS-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001413628.1 2545788 R 402881 CDS YP_001413629.1 154252805 5454834 2547483..2548517 1 NC_009719.1 PFAM: secretion protein HlyD family protein; KEGG: sme:SMb20699 putative protein secretion protein, HlyD family, similar to E. coli EmrK; secretion protein HlyD family protein 2548517 5454834 Plav_2360 Parvibaculum lavamentivorans DS-1 secretion protein HlyD family protein YP_001413629.1 2547483 D 402881 CDS YP_001413630.1 154252806 5455825 2548520..2550106 1 NC_009719.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMb20698 putative transport protein, similar to E. coli multidrug resistance protein EmrB; EmrB/QacA family drug resistance transporter 2550106 5455825 Plav_2361 Parvibaculum lavamentivorans DS-1 EmrB/QacA family drug resistance transporter YP_001413630.1 2548520 D 402881 CDS YP_001413631.1 154252807 5455350 2550255..2551004 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMb20871 putative dehydrogenasereductase, short-chain dehydrogenase/reductase protein; short-chain dehydrogenase/reductase SDR 2551004 5455350 Plav_2362 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001413631.1 2550255 D 402881 CDS YP_001413632.1 154252808 5456316 2551078..2552064 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: rle:RL2967 putative non-heme chloroperoxidase; alpha/beta hydrolase fold protein 2552064 5456316 Plav_2363 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001413632.1 2551078 D 402881 CDS YP_001413633.1 154252809 5453425 complement(2552226..2553227) 1 NC_009719.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase II 2553227 5453425 Plav_2364 Parvibaculum lavamentivorans DS-1 tryptophanyl-tRNA synthetase II YP_001413633.1 2552226 R 402881 CDS YP_001413634.1 154252810 5454925 2556260..2556604 1 NC_009719.1 KEGG: rpe:RPE_2440 hypothetical protein; hypothetical protein 2556604 5454925 Plav_2367 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413634.1 2556260 D 402881 CDS YP_001413635.1 154252811 5454844 complement(2556784..2557455) 1 NC_009719.1 PFAM: RES domain protein; KEGG: rle:pRL110092 hypothetical protein; RES domain-containing protein 2557455 5454844 Plav_2368 Parvibaculum lavamentivorans DS-1 RES domain-containing protein YP_001413635.1 2556784 R 402881 CDS YP_001413636.1 154252812 5453881 complement(2557452..2557976) 1 NC_009719.1 KEGG: ret:RHE_PE00061 hypothetical protein; hypothetical protein 2557976 5453881 Plav_2369 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413636.1 2557452 R 402881 CDS YP_001413637.1 154252813 5456902 2558107..2558490 1 NC_009719.1 KEGG: rsq:Rsph17025_4156 hypothetical protein; hypothetical protein 2558490 5456902 Plav_2370 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413637.1 2558107 D 402881 CDS YP_001413638.1 154252814 5456434 2558499..2559074 1 NC_009719.1 KEGG: mjl:Mjls_2690 hypothetical protein; hypothetical protein 2559074 5456434 Plav_2371 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413638.1 2558499 D 402881 CDS YP_001413639.1 154252815 5453975 complement(2559465..2560400) 1 NC_009719.1 PFAM: Pirin domain protein; KEGG: pde:Pden_3510 pirin domain protein domain protein; pirin domain-containing protein 2560400 5453975 Plav_2372 Parvibaculum lavamentivorans DS-1 pirin domain-containing protein YP_001413639.1 2559465 R 402881 CDS YP_001413640.1 154252816 5456424 complement(2560586..2561479) 1 NC_009719.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: atc:AGR_L_471GM hypothetical protein; LysR family transcriptional regulator 2561479 5456424 Plav_2373 Parvibaculum lavamentivorans DS-1 LysR family transcriptional regulator YP_001413640.1 2560586 R 402881 CDS YP_001413641.1 154252817 5456445 2561635..2562288 1 NC_009719.1 PFAM: isochorismatase hydrolase; KEGG: rle:RL0306 putative isochorismatase family protein; isochorismatase hydrolase 2562288 5456445 Plav_2374 Parvibaculum lavamentivorans DS-1 isochorismatase hydrolase YP_001413641.1 2561635 D 402881 CDS YP_001413642.1 154252818 5456382 2562583..2564238 1 NC_009719.1 catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis; acetolactate synthase 2564238 5456382 Plav_2375 Parvibaculum lavamentivorans DS-1 acetolactate synthase YP_001413642.1 2562583 D 402881 CDS YP_001413643.1 154252819 5453363 2564261..2565643 1 NC_009719.1 PFAM: aldehyde dehydrogenase; KEGG: hne:HNE_2500 aldehyde dehydrogenase family protein; aldehyde dehydrogenase 2565643 5453363 Plav_2376 Parvibaculum lavamentivorans DS-1 aldehyde dehydrogenase YP_001413643.1 2564261 D 402881 CDS YP_001413644.1 154252820 5453362 2565732..2567501 1 NC_009719.1 TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mpt:Mpe_A0112 Kef-type K+ transport; potassium efflux system protein 2567501 5453362 Plav_2377 Parvibaculum lavamentivorans DS-1 potassium efflux system protein YP_001413644.1 2565732 D 402881 CDS YP_001413645.1 154252821 5454680 complement(2567526..2567981) 1 NC_009719.1 PFAM: Endoribonuclease L-PSP; KEGG: reh:H16_A1805 putative translation initiation inhibitor,yjgFfamily; endoribonuclease L-PSP 2567981 5454680 Plav_2378 Parvibaculum lavamentivorans DS-1 endoribonuclease L-PSP YP_001413645.1 2567526 R 402881 CDS YP_001413646.1 154252822 5456926 2568110..2569726 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bja:bll5692 two-component hybrid sensor and regulator; integral membrane sensor signal transduction histidine kinase 2569726 5456926 Plav_2379 Parvibaculum lavamentivorans DS-1 integral membrane sensor signal transduction histidine kinase YP_001413646.1 2568110 D 402881 CDS YP_001413647.1 154252823 5456638 2569723..2570349 1 NC_009719.1 PFAM: regulatory protein LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bja:bll1714 two component regulator; response regulator receiver protein 2570349 5456638 Plav_2380 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001413647.1 2569723 D 402881 CDS YP_001413648.1 154252824 5454163 2570470..2570844 1 NC_009719.1 PFAM: response regulator receiver; KEGG: aba:Acid345_3728 response regulator receiver protein; response regulator receiver protein 2570844 5454163 Plav_2381 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001413648.1 2570470 D 402881 CDS YP_001413649.1 154252825 5454442 2570914..2571618 1 NC_009719.1 PFAM: isochorismatase hydrolase; KEGG: ppu:PP_3976 hydrolase, isochorismatase family; isochorismatase hydrolase 2571618 5454442 Plav_2382 Parvibaculum lavamentivorans DS-1 isochorismatase hydrolase YP_001413649.1 2570914 D 402881 CDS YP_001413650.1 154252826 5455840 2571623..2573590 1 NC_009719.1 PFAM: Amidohydrolase 3; KEGG: acb:A1S_1451 hypothetical protein; amidohydrolase 3 2573590 5455840 Plav_2383 Parvibaculum lavamentivorans DS-1 amidohydrolase 3 YP_001413650.1 2571623 D 402881 CDS YP_001413651.1 154252827 5456480 2573606..2575255 1 NC_009719.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: reu:Reut_A2884 protein of unknown function DUF894, DitE:major facilitator superfamily MFS_1; hypothetical protein 2575255 5456480 Plav_2384 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413651.1 2573606 D 402881 CDS YP_001413652.1 154252828 5456632 2575305..2575700 1 NC_009719.1 PFAM: DoxX family protein; KEGG: rfr:Rfer_2574 DoxX; DoxX family protein 2575700 5456632 Plav_2385 Parvibaculum lavamentivorans DS-1 DoxX family protein YP_001413652.1 2575305 D 402881 CDS YP_001413653.1 154252829 5456367 2575704..2577053 1 NC_009719.1 KEGG: gsu:GSU0801 hypothetical protein; hypothetical protein 2577053 5456367 Plav_2386 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413653.1 2575704 D 402881 CDS YP_001413654.1 154252830 5454460 2577139..2577480 1 NC_009719.1 PFAM: regulatory protein ArsR; KEGG: bbr:BB0936 putative ArsR family transcriptional regulator; regulatory protein ArsR 2577480 5454460 Plav_2387 Parvibaculum lavamentivorans DS-1 regulatory protein ArsR YP_001413654.1 2577139 D 402881 CDS YP_001413655.1 154252831 5455057 2577477..2577965 1 NC_009719.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: lil:LA3214 hypothetical protein; activator of Hsp90 ATPase 1 family protein 2577965 5455057 Plav_2388 Parvibaculum lavamentivorans DS-1 activator of Hsp90 ATPase 1 family protein YP_001413655.1 2577477 D 402881 CDS YP_001413656.1 154252832 5454987 2577977..2578612 1 NC_009719.1 KEGG: sma:SAV521 hypothetical protein; hypothetical protein 2578612 5454987 Plav_2389 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413656.1 2577977 D 402881 CDS YP_001413657.1 154252833 5455906 complement(2578677..2579141) 1 NC_009719.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bja:blr7360 hypothetical protein; activator of Hsp90 ATPase 1 family protein 2579141 5455906 Plav_2390 Parvibaculum lavamentivorans DS-1 activator of Hsp90 ATPase 1 family protein YP_001413657.1 2578677 R 402881 CDS YP_001413658.1 154252834 5453675 complement(2579138..2579485) 1 NC_009719.1 PFAM: regulatory protein ArsR; KEGG: bja:blr7359 transcriptional regulatory protein; regulatory protein ArsR 2579485 5453675 Plav_2391 Parvibaculum lavamentivorans DS-1 regulatory protein ArsR YP_001413658.1 2579138 R 402881 CDS YP_001413659.1 154252835 5454850 2579601..2581256 1 NC_009719.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 2581256 5454850 Plav_2392 Parvibaculum lavamentivorans DS-1 putative ABC transporter ATP-binding protein YP_001413659.1 2579601 D 402881 CDS YP_001413660.1 154252836 5455567 complement(2581356..2581607) 1 NC_009719.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pmy:Pmen_3214 AraC-type transcriptional regulator domain protein; helix-turn-helix domain-containing protein 2581607 5455567 Plav_2393 Parvibaculum lavamentivorans DS-1 helix-turn-helix domain-containing protein YP_001413660.1 2581356 R 402881 CDS YP_001413661.1 154252837 5455711 2582042..2582797 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pmy:Pmen_3215 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2582797 5455711 Plav_2395 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001413661.1 2582042 D 402881 CDS YP_001413662.1 154252838 5455152 2582991..2584610 1 NC_009719.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sensor histidine kinase/response regulator; histidine kinase 2584610 5455152 Plav_2396 Parvibaculum lavamentivorans DS-1 histidine kinase YP_001413662.1 2582991 D 402881 CDS YP_001413663.1 154252839 5455139 complement(2584621..2585196) 1 NC_009719.1 PFAM: protein of unknown function DUF1457; hypothetical protein 2585196 5455139 Plav_2397 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413663.1 2584621 R 402881 CDS YP_001413664.1 154252840 5456168 complement(2585525..2586187) 1 NC_009719.1 PFAM: toluene tolerance family protein; KEGG: hypothetical protein; toluene tolerance family protein 2586187 5456168 Plav_2398 Parvibaculum lavamentivorans DS-1 toluene tolerance family protein YP_001413664.1 2585525 R 402881 CDS YP_001413665.1 154252841 5454367 complement(2586264..2587151) 1 NC_009719.1 PFAM: VacJ family lipoprotein; KEGG: mag:amb0433 surface lipoprotein; VacJ family lipoprotein 2587151 5454367 Plav_2399 Parvibaculum lavamentivorans DS-1 VacJ family lipoprotein YP_001413665.1 2586264 R 402881 CDS YP_001413666.1 154252842 5454006 2587383..2588375 1 NC_009719.1 PFAM: regulatory protein ArsR; Methyltransferase type 11; Methyltransferase type 12; KEGG: mag:amb0432 SAM-dependent methyltransferase; type 11 methyltransferase 2588375 5454006 Plav_2400 Parvibaculum lavamentivorans DS-1 type 11 methyltransferase YP_001413666.1 2587383 D 402881 CDS YP_001413667.1 154252843 5453694 2588375..2589277 1 NC_009719.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; KEGG: 5,10-methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 2589277 5453694 Plav_2401 Parvibaculum lavamentivorans DS-1 5,10-methylenetetrahydrofolate reductase YP_001413667.1 2588375 D 402881 CDS YP_001413668.1 154252844 5456115 2589288..2590349 1 NC_009719.1 PFAM: homocysteine S-methyltransferase; KEGG: pae:PA1843 methionine synthase; homocysteine S-methyltransferase 2590349 5456115 Plav_2402 Parvibaculum lavamentivorans DS-1 homocysteine S-methyltransferase YP_001413668.1 2589288 D 402881 CDS YP_001413669.1 154252845 5456923 2590400..2593084 1 NC_009719.1 TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein; KEGG: ret:RHE_CH02901 5-methyltetrahydrofolate--homocysteine S-methyltransferase protein; methionine synthase 2593084 5456923 Plav_2403 Parvibaculum lavamentivorans DS-1 methionine synthase YP_001413669.1 2590400 D 402881 CDS YP_001413670.1 154252846 5454415 complement(2593088..2593429) 1 NC_009719.1 PFAM: helix-turn-helix HxlR type; KEGG: bja:blr7748 transcriptional regulatory protein; HxlR family transcriptional regulator 2593429 5454415 Plav_2404 Parvibaculum lavamentivorans DS-1 HxlR family transcriptional regulator YP_001413670.1 2593088 R 402881 CDS YP_001413671.1 154252847 5453725 2593506..2594060 1 NC_009719.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_B0960 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 2594060 5453725 Plav_2405 Parvibaculum lavamentivorans DS-1 carboxymuconolactone decarboxylase YP_001413671.1 2593506 D 402881 CDS YP_001413672.1 154252848 5455154 complement(2594473..2595453) 1 NC_009719.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pen:PSEEN5326 alcohol dehydrogenase, zinc-containing; alcohol dehydrogenase 2595453 5455154 Plav_2406 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001413672.1 2594473 R 402881 CDS YP_001413673.1 154252849 5454025 complement(2595518..2599135) 1 NC_009719.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: ret:RHE_PE00300 probable N-methylhydantoinase (ATP-hydrolyzing)/5-oxoprolinase protein; 5-oxoprolinase 2599135 5454025 Plav_2407 Parvibaculum lavamentivorans DS-1 5-oxoprolinase YP_001413673.1 2595518 R 402881 CDS YP_001413674.1 154252850 5454746 2599261..2599971 1 NC_009719.1 PFAM: heat shock protein DnaJ domain protein; KEGG: mmr:Mmar10_2092 heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 2599971 5454746 Plav_2408 Parvibaculum lavamentivorans DS-1 heat shock protein DnaJ domain-containing protein YP_001413674.1 2599261 D 402881 CDS YP_001413675.1 154252851 5455044 2600369..2601235 1 NC_009719.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: hch:HCH_01819 permease of the drug/metabolite transporter (DMT) superfamily; hypothetical protein 2601235 5455044 Plav_2409 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413675.1 2600369 D 402881 CDS YP_001413676.1 154252852 5455849 2601235..2601978 1 NC_009719.1 PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: rpb:RPB_1985 negative regulator of AmpC, AmpD; N-acetylmuramoyl-L-alanine amidase 2601978 5455849 Plav_2410 Parvibaculum lavamentivorans DS-1 N-acetylmuramoyl-L-alanine amidase YP_001413676.1 2601235 D 402881 CDS YP_001413677.1 154252853 5455106 complement(2601975..2602937) 1 NC_009719.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: NADP-dependent quinone oxidoreductase, putative; alcohol dehydrogenase 2602937 5455106 Plav_2411 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001413677.1 2601975 R 402881 CDS YP_001413678.1 154252854 5454555 2603811..2604296 1 NC_009719.1 PFAM: protein of unknown function UPF0040; KEGG: rbe:RBE_0539 MraZ protein; hypothetical protein 2604296 5454555 Plav_2412 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413678.1 2603811 D 402881 CDS YP_001413679.1 154252855 5456421 2604293..2605312 1 NC_009719.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: mag:amb3840 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 2605312 5456421 Plav_2413 Parvibaculum lavamentivorans DS-1 S-adenosyl-methyltransferase MraW YP_001413679.1 2604293 D 402881 CDS YP_001413680.1 154252856 5453931 2605309..2605680 1 NC_009719.1 KEGG: nwi:Nwi_1044 hypothetical protein; hypothetical protein 2605680 5453931 Plav_2414 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413680.1 2605309 D 402881 CDS YP_001413681.1 154252857 5453681 2605677..2607440 1 NC_009719.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: nha:Nham_1273 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 2607440 5453681 Plav_2415 Parvibaculum lavamentivorans DS-1 peptidoglycan glycosyltransferase YP_001413681.1 2605677 D 402881 CDS YP_001413682.1 154252858 5456645 2607510..2608958 1 NC_009719.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mag:amb3843 UDP-N-acetylmuramyl tripeptide synthase; UDP-N-acetylmuramyl tripeptide synthetase 2608958 5456645 Plav_2416 Parvibaculum lavamentivorans DS-1 UDP-N-acetylmuramyl tripeptide synthetase YP_001413682.1 2607510 D 402881 CDS YP_001413683.1 154252859 5456848 2608955..2610394 1 NC_009719.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rpb:RPB_1990 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 2610394 5456848 Plav_2417 Parvibaculum lavamentivorans DS-1 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase YP_001413683.1 2608955 D 402881 CDS YP_001413684.1 154252860 5454664 2610394..2611482 1 NC_009719.1 TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: glycosyl transferase family 4; KEGG: mag:amb3845 UDP-N-acetylmuramyl pentapeptide phosphotransferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 2611482 5454664 Plav_2418 Parvibaculum lavamentivorans DS-1 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001413684.1 2610394 D 402881 CDS YP_001413685.1 154252861 5455424 2611487..2612890 1 NC_009719.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 2612890 murD 5455424 murD Parvibaculum lavamentivorans DS-1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_001413685.1 2611487 D 402881 CDS YP_001413686.1 154252862 5453939 2612887..2614035 1 NC_009719.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: mes:Meso_2008 cell division protein FtsW; cell division protein FtsW 2614035 5453939 Plav_2420 Parvibaculum lavamentivorans DS-1 cell division protein FtsW YP_001413686.1 2612887 D 402881 CDS YP_001413687.1 154252863 5454744 2614032..2615225 1 NC_009719.1 TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; KEGG: gbe:GbCGDNIH1_0429 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 2615225 5454744 Plav_2421 Parvibaculum lavamentivorans DS-1 UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase YP_001413687.1 2614032 D 402881 CDS YP_001413688.1 154252864 5454532 2615225..2616700 1 NC_009719.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 2616700 murC 5454532 murC Parvibaculum lavamentivorans DS-1 UDP-N-acetylmuramate--L-alanine ligase YP_001413688.1 2615225 D 402881 CDS YP_001413689.1 154252865 5453785 2616697..2617629 1 NC_009719.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; KEGG: mag:amb3850 UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase 2617629 5453785 Plav_2423 Parvibaculum lavamentivorans DS-1 UDP-N-acetylenolpyruvoylglucosamine reductase YP_001413689.1 2616697 D 402881 CDS YP_001413690.1 154252866 5454049 2617626..2618552 1 NC_009719.1 TIGRFAM: D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; KEGG: sme:SMc01871 D-alanylalanine synthetase; D-alanine--D-alanine ligase 2618552 5454049 Plav_2424 Parvibaculum lavamentivorans DS-1 D-alanine--D-alanine ligase YP_001413690.1 2617626 D 402881 CDS YP_001413691.1 154252867 5455731 2618540..2619544 1 NC_009719.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: mes:Meso_2003 polypeptide-transport-associated, FtsQ-type; polypeptide-transport-associated domain-containing protein 2619544 5455731 Plav_2425 Parvibaculum lavamentivorans DS-1 polypeptide-transport-associated domain-containing protein YP_001413691.1 2618540 D 402881 CDS YP_001413692.1 154252868 5454068 2619541..2620851 1 NC_009719.1 PFAM: cell division protein FtsA; KEGG: mag:amb3853 actin-like ATPase involved in cell division; cell division protein FtsA 2620851 5454068 Plav_2426 Parvibaculum lavamentivorans DS-1 cell division protein FtsA YP_001413692.1 2619541 D 402881 CDS YP_001413693.1 154252869 5456746 2620910..2622685 1 NC_009719.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: bmb:BruAb1_1420 FtsZ, cell division protein FtsZ; cell division protein FtsZ 2622685 5456746 Plav_2427 Parvibaculum lavamentivorans DS-1 cell division protein FtsZ YP_001413693.1 2620910 D 402881 CDS YP_001413694.1 154252870 5453468 complement(2622755..2624668) 1 NC_009719.1 PFAM: acyltransferase 3; KEGG: azo:azo3255 acyltransferase; acyltransferase 3 2624668 5453468 Plav_2428 Parvibaculum lavamentivorans DS-1 acyltransferase 3 YP_001413694.1 2622755 R 402881 CDS YP_001413695.1 154252871 5454742 2624980..2625984 1 NC_009719.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2625984 lpxC 5454742 lpxC Parvibaculum lavamentivorans DS-1 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_001413695.1 2624980 D 402881 CDS YP_001413696.1 154252872 5453506 2626208..2627083 1 NC_009719.1 KEGG: mag:amb3856 DNA uptake lipoprotein; DNA uptake lipoprotein 2627083 5453506 Plav_2430 Parvibaculum lavamentivorans DS-1 DNA uptake lipoprotein YP_001413696.1 2626208 D 402881 CDS YP_001413697.1 154252873 5454222 2627116..2628789 1 NC_009719.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: rpc:RPC_3295 DNA repair protein RecN; DNA repair protein RecN 2628789 5454222 Plav_2431 Parvibaculum lavamentivorans DS-1 DNA repair protein RecN YP_001413697.1 2627116 D 402881 CDS YP_001413698.1 154252874 5454003 2628800..2630932 1 NC_009719.1 KEGG: mmr:Mmar10_2066 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: NAD-dependent DNA ligase; NAD-dependent DNA ligase 2630932 5454003 Plav_2432 Parvibaculum lavamentivorans DS-1 NAD-dependent DNA ligase YP_001413698.1 2628800 D 402881 CDS YP_001413699.1 154252875 5454207 2631065..2632288 1 NC_009719.1 KEGG: rpe:RPE_3493 protein involved in cellulose biosynthesis (CelD)-like protein; protein involved in cellulose biosynthesis (CelD)-like protein 2632288 5454207 Plav_2433 Parvibaculum lavamentivorans DS-1 protein involved in cellulose biosynthesis (CelD)-like protein YP_001413699.1 2631065 D 402881 CDS YP_001413700.1 154252876 5453655 complement(2632296..2634110) 1 NC_009719.1 PFAM: creatinase; peptidase M24; KEGG: bms:BR1418 aminopeptidase P; peptidase M24 2634110 5453655 Plav_2434 Parvibaculum lavamentivorans DS-1 peptidase M24 YP_001413700.1 2632296 R 402881 CDS YP_001413701.1 154252877 5454113 complement(2634152..2635084) 1 NC_009719.1 PFAM: putative RNA methylase; methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bmb:BruAb1_1412 ribosomal protein L11 methyltransferase, hypothetical; ribosomal L11 methyltransferase 2635084 5454113 Plav_2435 Parvibaculum lavamentivorans DS-1 ribosomal L11 methyltransferase YP_001413701.1 2634152 R 402881 CDS YP_001413702.1 154252878 5453972 complement(2635293..2637629) 1 NC_009719.1 PFAM: UvrD/REP helicase; KEGG: ret:RHE_CH02819 DNA helicase II protein; UvrD/REP helicase 2637629 5453972 Plav_2436 Parvibaculum lavamentivorans DS-1 UvrD/REP helicase YP_001413702.1 2635293 R 402881 CDS YP_001413703.1 154252879 5456094 2637686..2639575 1 NC_009719.1 PFAM: CBS domain containing protein; Chloride channel core; KEGG: bur:Bcep18194_C6569 Cl-channel, voltage gated; chloride channel core protein 2639575 5456094 Plav_2437 Parvibaculum lavamentivorans DS-1 chloride channel core protein YP_001413703.1 2637686 D 402881 CDS YP_001413704.1 154252880 5456661 complement(2639759..2640253) 1 NC_009719.1 KEGG: rpe:RPE_2139 hypothetical protein; hypothetical protein 2640253 5456661 Plav_2438 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413704.1 2639759 R 402881 CDS YP_001413705.1 154252881 5456071 2640412..2641806 1 NC_009719.1 PFAM: FAD linked oxidase domain protein; KEGG: rru:Rru_A1124 D-lactate dehydrogenase (cytochrome); D-lactate dehydrogenase 2641806 5456071 Plav_2439 Parvibaculum lavamentivorans DS-1 D-lactate dehydrogenase YP_001413705.1 2640412 D 402881 CDS YP_001413706.1 154252882 5454340 complement(2642136..2642933) 1 NC_009719.1 PFAM: secretion protein HlyD family protein; KEGG: tbd:Tbd_1084 HlyD family secretion protein; secretion protein HlyD family protein 2642933 5454340 Plav_2440 Parvibaculum lavamentivorans DS-1 secretion protein HlyD family protein YP_001413706.1 2642136 R 402881 CDS YP_001413707.1 154252883 5455006 complement(2642937..2643590) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: rso:RSc0698 putative transcription regulator protein; TetR family transcriptional regulator 2643590 5455006 Plav_2441 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001413707.1 2642937 R 402881 CDS YP_001413708.1 154252884 5454470 2643721..2644077 1 NC_009719.1 hypothetical protein 2644077 5454470 Plav_2442 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413708.1 2643721 D 402881 CDS YP_001413709.1 154252885 5454436 2644093..2647533 1 NC_009719.1 PFAM: AsmA family protein; KEGG: ret:RHE_CH02803 hypothetical protein; AsmA family protein 2647533 5454436 Plav_2443 Parvibaculum lavamentivorans DS-1 AsmA family protein YP_001413709.1 2644093 D 402881 CDS YP_001413710.1 154252886 5456931 complement(2647544..2647813) 1 NC_009719.1 involved in siderophore biosynthesis; KEGG: rru:Rru_A2208 hypothetical protein; arylsulfate sulfotransferase-like protein 2647813 5456931 Plav_2444 Parvibaculum lavamentivorans DS-1 arylsulfate sulfotransferase-like protein YP_001413710.1 2647544 R 402881 CDS YP_001413711.1 154252887 5456911 complement(2647828..2649228) 1 NC_009719.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2649228 fumC 5456911 fumC Parvibaculum lavamentivorans DS-1 fumarate hydratase YP_001413711.1 2647828 R 402881 CDS YP_001413712.1 154252888 5456944 complement(2649357..2649839) 1 NC_009719.1 PFAM: protein of unknown function DUF1321; KEGG: bbt:BBta_6105 hypothetical protein; hypothetical protein 2649839 5456944 Plav_2446 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413712.1 2649357 R 402881 CDS YP_001413713.1 154252889 5454845 complement(2650349..2651515) 1 NC_009719.1 PFAM: peptidase M19 renal dipeptidase; KEGG: mmr:Mmar10_0282 peptidase M19, renal dipeptidase; peptidase M19 2651515 5454845 Plav_2447 Parvibaculum lavamentivorans DS-1 peptidase M19 YP_001413713.1 2650349 R 402881 CDS YP_001413714.1 154252890 5453990 2651704..2652498 1 NC_009719.1 PFAM: thymidylate synthase; KEGG: bmb:BruAb1_1394 ThyA, thymidylate synthase; thymidylate synthase 2652498 5453990 Plav_2448 Parvibaculum lavamentivorans DS-1 thymidylate synthase YP_001413714.1 2651704 D 402881 CDS YP_001413715.1 154252891 5455411 2652665..2653174 1 NC_009719.1 PFAM: dihydrofolate reductase region; KEGG: dihydrofolate reductase; dihydrofolate reductase 2653174 5455411 Plav_2449 Parvibaculum lavamentivorans DS-1 dihydrofolate reductase YP_001413715.1 2652665 D 402881 CDS YP_001413716.1 154252892 5454383 2653276..2653944 1 NC_009719.1 KEGG: bja:bll7793 similar to PEP2 protein; PEP2-like protein 2653944 5454383 Plav_2450 Parvibaculum lavamentivorans DS-1 PEP2-like protein YP_001413716.1 2653276 D 402881 CDS YP_001413717.1 154252893 5455786 2654046..2655155 1 NC_009719.1 TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gvi:glr4425 glutathione dependent formaldehyde dehydrogenase; S-(hydroxymethyl)glutathione dehydrogenase 2655155 5455786 Plav_2451 Parvibaculum lavamentivorans DS-1 S-(hydroxymethyl)glutathione dehydrogenase YP_001413717.1 2654046 D 402881 CDS YP_001413718.1 154252894 5456298 2655155..2655994 1 NC_009719.1 TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; KEGG: esterase; S-formylglutathione hydrolase 2655994 5456298 Plav_2452 Parvibaculum lavamentivorans DS-1 S-formylglutathione hydrolase YP_001413718.1 2655155 D 402881 CDS YP_001413719.1 154252895 5455158 2655991..2657268 1 NC_009719.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bbt:BBta_0261 hypothetical protein; amine oxidase 2657268 5455158 Plav_2453 Parvibaculum lavamentivorans DS-1 amine oxidase YP_001413719.1 2655991 D 402881 CDS YP_001413720.1 154252896 5455671 2657317..2658234 1 NC_009719.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: hne:HNE_0464 putative gluconolactonase; SMP-30/gluconolaconase/LRE domain-containing protein 2658234 5455671 Plav_2454 Parvibaculum lavamentivorans DS-1 SMP-30/gluconolaconase/LRE domain-containing protein YP_001413720.1 2657317 D 402881 CDS YP_001413721.1 154252897 5455231 2658345..2658680 1 NC_009719.1 KEGG: hypothetical protein; hypothetical protein 2658680 5455231 Plav_2455 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413721.1 2658345 D 402881 CDS YP_001413722.1 154252898 5455500 complement(2658751..2659497) 1 NC_009719.1 PFAM: protein of unknown function DUF1428; KEGG: sal:Sala_0015 protein of unknown function DUF1428; hypothetical protein 2659497 5455500 Plav_2456 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413722.1 2658751 R 402881 CDS YP_001413723.1 154252899 5455713 complement(2659603..2660751) 1 NC_009719.1 PFAM: protein of unknown function DUF59; KEGG: mag:amb3487 ATPase involved in chromosome partitioning; hypothetical protein 2660751 5455713 Plav_2457 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413723.1 2659603 R 402881 CDS YP_001413724.1 154252900 5455549 2660920..2662116 1 NC_009719.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: bja:bll6509 putative membrane bound protease protein; HflK protein 2662116 5455549 Plav_2458 Parvibaculum lavamentivorans DS-1 HflK protein YP_001413724.1 2660920 D 402881 CDS YP_001413725.1 154252901 5453813 2662116..2662988 1 NC_009719.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: rpa:RPA3490 putative hflC protein; HflC protein 2662988 5453813 Plav_2459 Parvibaculum lavamentivorans DS-1 HflC protein YP_001413725.1 2662116 D 402881 CDS YP_001413726.1 154252902 5454939 2663010..2663195 1 NC_009719.1 KEGG: mlo:msl1453 hypothetical protein; hypothetical protein 2663195 5454939 Plav_2460 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413726.1 2663010 D 402881 CDS YP_001413727.1 154252903 5455789 2663283..2664746 1 NC_009719.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mlo:mll1451 probable serine protease; protease Do 2664746 5455789 Plav_2461 Parvibaculum lavamentivorans DS-1 protease Do YP_001413727.1 2663283 D 402881 CDS YP_001413728.1 154252904 5455822 complement(2664743..2665633) 1 NC_009719.1 TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bbt:BBta_6089 phosphoserine phosphatase; phosphoserine phosphatase SerB 2665633 5455822 Plav_2462 Parvibaculum lavamentivorans DS-1 phosphoserine phosphatase SerB YP_001413728.1 2664743 R 402881 CDS YP_001413729.1 154252905 5455289 2665660..2666604 1 NC_009719.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; KEGG: rpa:RPA2030 tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 2666604 5455289 Plav_2463 Parvibaculum lavamentivorans DS-1 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001413729.1 2665660 D 402881 CDS YP_001413730.1 154252906 5454010 2666729..2668486 1 NC_009719.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: acetolactate synthase large subunit; acetolactate synthase large subunit 2668486 5454010 Plav_2464 Parvibaculum lavamentivorans DS-1 acetolactate synthase large subunit YP_001413730.1 2666729 D 402881 CDS YP_001413731.1 154252907 5456226 2668545..2669057 1 NC_009719.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: rru:Rru_A0468 acetolactate synthase, small subunit; acetolactate synthase small subunit 2669057 5456226 Plav_2465 Parvibaculum lavamentivorans DS-1 acetolactate synthase small subunit YP_001413731.1 2668545 D 402881 CDS YP_001413732.1 154252908 5454982 2669087..2670106 1 NC_009719.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2670106 5454982 Plav_2466 Parvibaculum lavamentivorans DS-1 ketol-acid reductoisomerase YP_001413732.1 2669087 D 402881 CDS YP_001413733.1 154252909 5453619 2670185..2670868 1 NC_009719.1 KEGG: sco:SCO0976 hypothetical protein; hypothetical protein 2670868 5453619 Plav_2467 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413733.1 2670185 D 402881 CDS YP_001413734.1 154252910 5454380 complement(2671081..2671518) 1 NC_009719.1 PFAM: globin; KEGG: hne:HNE_0903 globin domain protein; globin 2671518 5454380 Plav_2468 Parvibaculum lavamentivorans DS-1 globin YP_001413734.1 2671081 R 402881 CDS YP_001413735.1 154252911 5454474 complement(2671694..2672440) 1 NC_009719.1 KEGG: bja:blr2879 hypothetical protein; hypothetical protein 2672440 5454474 Plav_2469 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413735.1 2671694 R 402881 CDS YP_001413736.1 154252912 5456280 complement(2672540..2673472) 1 NC_009719.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mlo:mll2984 cation efflux system protein; cation diffusion facilitator family transporter 2673472 5456280 Plav_2470 Parvibaculum lavamentivorans DS-1 cation diffusion facilitator family transporter YP_001413736.1 2672540 R 402881 CDS YP_001413737.1 154252913 5453624 complement(2673469..2673810) 1 NC_009719.1 PFAM: regulatory protein ArsR; KEGG: bxe:Bxe_A0960 transcriptional regulator, ArsR family; regulatory protein ArsR 2673810 5453624 Plav_2471 Parvibaculum lavamentivorans DS-1 regulatory protein ArsR YP_001413737.1 2673469 R 402881 CDS YP_001413738.1 154252914 5453957 complement(2673897..2674340) 1 NC_009719.1 PFAM: regulatory protein MarR; KEGG: pst:PSPTO_0818 transcriptional regulator, MarR family; MarR family transcriptional regulator 2674340 5453957 Plav_2472 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001413738.1 2673897 R 402881 CDS YP_001413739.1 154252915 5453448 2674416..2675123 1 NC_009719.1 PFAM: nitroreductase; KEGG: sen:SACE_6504 oxidoreductase; nitroreductase 2675123 5453448 Plav_2473 Parvibaculum lavamentivorans DS-1 nitroreductase YP_001413739.1 2674416 D 402881 CDS YP_001413740.1 154252916 5453714 2675196..2676401 1 NC_009719.1 TIGRFAM: phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: dar:Daro_3552 phosphoribosylglycinamide formyltransferase 2; phosphoribosylglycinamide formyltransferase 2 2676401 5453714 Plav_2474 Parvibaculum lavamentivorans DS-1 phosphoribosylglycinamide formyltransferase 2 YP_001413740.1 2675196 D 402881 CDS YP_001413741.1 154252917 5454929 2676508..2677266 1 NC_009719.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: lpp:plpp0104 hypothetical protein; helix-turn-helix domain-containing protein 2677266 5454929 Plav_2475 Parvibaculum lavamentivorans DS-1 helix-turn-helix domain-containing protein YP_001413741.1 2676508 D 402881 CDS YP_001413742.1 154252918 5453676 2677270..2677641 1 NC_009719.1 KEGG: tfu:Tfu_1573 hypothetical protein; hypothetical protein 2677641 5453676 Plav_2476 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413742.1 2677270 D 402881 CDS YP_001413743.1 154252919 5456058 2677725..2678729 1 NC_009719.1 TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: hne:HNE_3087 K+-dependent Na+/Ca+ exchanger related-protein; CaCA family Na(+)/Ca(+) antiporter 2678729 5456058 Plav_2477 Parvibaculum lavamentivorans DS-1 CaCA family Na(+)/Ca(+) antiporter YP_001413743.1 2677725 D 402881 CDS YP_001413744.1 154252920 5453502 2678814..2679773 1 NC_009719.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cvi:CV0720 probable transcriptional regulator LysR family; LysR family transcriptional regulator 2679773 5453502 Plav_2478 Parvibaculum lavamentivorans DS-1 LysR family transcriptional regulator YP_001413744.1 2678814 D 402881 CDS YP_001413745.1 154252921 5454058 2680309..2681349 1 NC_009719.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 2681349 5454058 Plav_2479 Parvibaculum lavamentivorans DS-1 rod shape-determining protein MreB YP_001413745.1 2680309 D 402881 CDS YP_001413746.1 154252922 5453866 2681423..2682376 1 NC_009719.1 TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: rsq:Rsph17025_1601 rod shape-determining protein MreC; rod shape-determining protein MreC 2682376 5453866 Plav_2480 Parvibaculum lavamentivorans DS-1 rod shape-determining protein MreC YP_001413746.1 2681423 D 402881 CDS YP_001413747.1 154252923 5455661 2682381..2682914 1 NC_009719.1 KEGG: rru:Rru_A0472 rod shape-determining protein MreD; rod shape-determining protein MreD 2682914 5455661 Plav_2481 Parvibaculum lavamentivorans DS-1 rod shape-determining protein MreD YP_001413747.1 2682381 D 402881 CDS YP_001413748.1 154252924 5454070 2682939..2684825 1 NC_009719.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: rru:Rru_A0473 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 2684825 5454070 Plav_2482 Parvibaculum lavamentivorans DS-1 peptidoglycan glycosyltransferase YP_001413748.1 2682939 D 402881 CDS YP_001413749.1 154252925 5454657 2684825..2685973 1 NC_009719.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: mag:amb3517 bacterial cell division membrane protein; rod shape-determining protein RodA 2685973 5454657 Plav_2483 Parvibaculum lavamentivorans DS-1 rod shape-determining protein RodA YP_001413749.1 2684825 D 402881 CDS YP_001413750.1 154252926 5453548 complement(2686227..2687075) 1 NC_009719.1 KEGG: reu:Reut_B4998 hypothetical protein; hypothetical protein 2687075 5453548 Plav_2484 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413750.1 2686227 R 402881 CDS YP_001413751.1 154252927 5455177 complement(2687160..2688506) 1 NC_009719.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mag:amb1428 superfamily II DNA and RNA helicase; DEAD/DEAH box helicase 2688506 5455177 Plav_2485 Parvibaculum lavamentivorans DS-1 DEAD/DEAH box helicase YP_001413751.1 2687160 R 402881 CDS YP_001413752.1 154252928 5453942 2688856..2689821 1 NC_009719.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: bbt:BBta_2459 putative magnesium/cobalt transport protein; Mg2 transporter protein CorA family protein 2689821 5453942 Plav_2486 Parvibaculum lavamentivorans DS-1 Mg2 transporter protein CorA family protein YP_001413752.1 2688856 D 402881 CDS YP_001413753.1 154252929 5454036 2689818..2690429 1 NC_009719.1 PFAM: Phosphoglycerate mutase; KEGG: mag:amb0541 fructose-2,6-bisphosphatase; phosphoglycerate mutase 2690429 5454036 Plav_2487 Parvibaculum lavamentivorans DS-1 phosphoglycerate mutase YP_001413753.1 2689818 D 402881 CDS YP_001413754.1 154252930 5454928 2690426..2691409 1 NC_009719.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rpa:RPA3967 putative threonine dehydratase; pyridoxal-5'-phosphate-dependent protein subunit beta 2691409 5454928 Plav_2488 Parvibaculum lavamentivorans DS-1 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001413754.1 2690426 D 402881 CDS YP_001413755.1 154252931 5453889 complement(2691406..2691996) 1 NC_009719.1 KEGG: rpa:RPA3966 hypothetical protein; hypothetical protein 2691996 5453889 Plav_2489 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413755.1 2691406 R 402881 CDS YP_001413756.1 154252932 5454370 2692145..2692759 1 NC_009719.1 KEGG: mmr:Mmar10_2009 hypothetical protein; hypothetical protein 2692759 5454370 Plav_2490 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413756.1 2692145 D 402881 CDS YP_001413757.1 154252933 5454030 2692856..2694046 1 NC_009719.1 PFAM: acyltransferase 3; KEGG: bch:Bcen2424_3971 acyltransferase 3; acyltransferase 3 2694046 5454030 Plav_2491 Parvibaculum lavamentivorans DS-1 acyltransferase 3 YP_001413757.1 2692856 D 402881 CDS YP_001413758.1 154252934 5456271 complement(2694026..2695111) 1 NC_009719.1 KEGG: sde:Sde_0483 hypothetical protein; hypothetical protein 2695111 5456271 Plav_2492 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413758.1 2694026 R 402881 CDS YP_001413759.1 154252935 5454833 complement(2695116..2695832) 1 NC_009719.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmr:Mmar10_2007 methyltransferase type 11; type 11 methyltransferase 2695832 5454833 Plav_2493 Parvibaculum lavamentivorans DS-1 type 11 methyltransferase YP_001413759.1 2695116 R 402881 CDS YP_001413760.1 154252936 5453733 complement(2695798..2697156) 1 NC_009719.1 PFAM: glycosyl transferase group 1; KEGG: nca:Noca_2799 glycosyl transferase, group 1; group 1 glycosyl transferase 2697156 5453733 Plav_2494 Parvibaculum lavamentivorans DS-1 group 1 glycosyl transferase YP_001413760.1 2695798 R 402881 CDS YP_001413761.1 154252937 5455223 complement(2697315..2697737) 1 NC_009719.1 KEGG: bbt:BBta_2163 hypothetical protein; hypothetical protein 2697737 5455223 Plav_2495 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413761.1 2697315 R 402881 CDS YP_001413762.1 154252938 5454865 complement(2697804..2698199) 1 NC_009719.1 hypothetical protein 2698199 5454865 Plav_2496 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413762.1 2697804 R 402881 CDS YP_001413763.1 154252939 5455578 complement(2698283..2699254) 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: epoxide hydrolase; alpha/beta hydrolase fold protein 2699254 5455578 Plav_2497 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001413763.1 2698283 R 402881 CDS YP_001413764.1 154252940 5455877 complement(2699303..2700805) 1 NC_009719.1 PFAM: FAD dependent oxidoreductase; KEGG: hne:HNE_2414 hypothetical protein; FAD dependent oxidoreductase 2700805 5455877 Plav_2498 Parvibaculum lavamentivorans DS-1 FAD dependent oxidoreductase YP_001413764.1 2699303 R 402881 CDS YP_001413765.1 154252941 5453845 complement(2700927..2701313) 1 NC_009719.1 PFAM: protein of unknown function DUF423; KEGG: psa:PST_3985 uncharacterized small membrane protein; hypothetical protein 2701313 5453845 Plav_2499 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413765.1 2700927 R 402881 CDS YP_001413766.1 154252942 5455579 2701504..2702613 1 NC_009719.1 KEGG: hne:HNE_2926 hypothetical protein; hypothetical protein 2702613 5455579 Plav_2500 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413766.1 2701504 D 402881 CDS YP_001413767.1 154252943 5453520 2702623..2703663 1 NC_009719.1 PFAM: aminoglycoside phosphotransferase; KEGG: hypothetical protein; aminoglycoside phosphotransferase 2703663 5453520 Plav_2501 Parvibaculum lavamentivorans DS-1 aminoglycoside phosphotransferase YP_001413767.1 2702623 D 402881 CDS YP_001413768.1 154252944 5456860 2703660..2704109 1 NC_009719.1 KEGG: hypothetical protein; hypothetical protein 2704109 5456860 Plav_2502 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413768.1 2703660 D 402881 CDS YP_001413769.1 154252945 5455558 2704170..2705363 1 NC_009719.1 PFAM: proton/sugar symporter LacY; nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: mag:amb2280 permease of the major facilitator superfamily; major facilitator superfamily transporter 2705363 5455558 Plav_2503 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001413769.1 2704170 D 402881 CDS YP_001413770.1 154252946 5454689 2705353..2706210 1 NC_009719.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bra:BRADO4030 putative TauD/TfdA family dioxygenase; taurine dioxygenase 2706210 5454689 Plav_2504 Parvibaculum lavamentivorans DS-1 taurine dioxygenase YP_001413770.1 2705353 D 402881 CDS YP_001413771.1 154252947 5454835 2706309..2707322 1 NC_009719.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rxy:Rxyl_0255 alcohol dehydrogenase, zinc-binding protein; alcohol dehydrogenase 2707322 5454835 Plav_2505 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001413771.1 2706309 D 402881 CDS YP_001413772.1 154252948 5454496 2707390..2707857 1 NC_009719.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reu:Reut_A2755 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2707857 5454496 Plav_2506 Parvibaculum lavamentivorans DS-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001413772.1 2707390 D 402881 CDS YP_001413773.1 154252949 5455000 2707854..2708216 1 NC_009719.1 PFAM: regulatory protein ArsR; KEGG: transcriptional regulator, ArsR family; regulatory protein ArsR 2708216 5455000 Plav_2507 Parvibaculum lavamentivorans DS-1 regulatory protein ArsR YP_001413773.1 2707854 D 402881 CDS YP_001413774.1 154252950 5453680 2708213..2708698 1 NC_009719.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mes:Meso_4061 hypothetical protein; activator of Hsp90 ATPase 1 family protein 2708698 5453680 Plav_2508 Parvibaculum lavamentivorans DS-1 activator of Hsp90 ATPase 1 family protein YP_001413774.1 2708213 D 402881 CDS YP_001413775.1 154252951 5454933 complement(2708705..2709730) 1 NC_009719.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rpe:RPE_1470 mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; mandelate racemase/muconate lactonizing protein 2709730 5454933 Plav_2509 Parvibaculum lavamentivorans DS-1 mandelate racemase/muconate lactonizing protein YP_001413775.1 2708705 R 402881 CDS YP_001413776.1 154252952 5455790 complement(2709799..2712060) 1 NC_009719.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: bbt:BBta_7152 putative adenylate/guanylyl cyclase with a CHASE2 domain; putative Chase2 sensor protein 2712060 5455790 Plav_2510 Parvibaculum lavamentivorans DS-1 putative Chase2 sensor protein YP_001413776.1 2709799 R 402881 CDS YP_001413777.1 154252953 5454023 complement(2712226..2712624) 1 NC_009719.1 PFAM: cytochrome c class I; KEGG: rde:RD1_1518 cytochrome c2; cytochrome c class I 2712624 5454023 Plav_2511 Parvibaculum lavamentivorans DS-1 cytochrome c class I YP_001413777.1 2712226 R 402881 CDS YP_001413778.1 154252954 5454962 2712776..2713939 1 NC_009719.1 PFAM: protein of unknown function DUF140; KEGG: pen:PSEEN0098 ABC transporter, permease protein; hypothetical protein 2713939 5454962 Plav_2512 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413778.1 2712776 D 402881 CDS YP_001413779.1 154252955 5455613 2713936..2714715 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsh:Rsph17029_1488 ABC transporter related; ABC transporter-like protein 2714715 5455613 Plav_2513 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001413779.1 2713936 D 402881 CDS YP_001413780.1 154252956 5454491 2714721..2715629 1 NC_009719.1 PFAM: Mammalian cell entry related domain protein; KEGG: pen:PSEEN0096 hypothetical protein; hypothetical protein 2715629 5454491 Plav_2514 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413780.1 2714721 D 402881 CDS YP_001413781.1 154252957 5455532 2715626..2716312 1 NC_009719.1 KEGG: yen:YE1250 hypothetical protein; ABC transporter auxiliary component-like protein 2716312 5455532 Plav_2515 Parvibaculum lavamentivorans DS-1 ABC transporter auxiliary component-like protein YP_001413781.1 2715626 D 402881 CDS YP_001413782.1 154252958 5456189 complement(2716320..2718614) 1 NC_009719.1 KEGG: sme:SMc00190 hypothetical protein; hypothetical protein 2718614 5456189 Plav_2516 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413782.1 2716320 R 402881 CDS YP_001413783.1 154252959 5454139 2718846..2719232 1 NC_009719.1 PFAM: Hpt domain protein; KEGG: mmr:Mmar10_1987 Hpt protein; Hpt protein 2719232 5454139 Plav_2517 Parvibaculum lavamentivorans DS-1 Hpt protein YP_001413783.1 2718846 D 402881 CDS YP_001413784.1 154252960 5456312 complement(2719432..2720556) 1 NC_009719.1 PFAM: FAD dependent oxidoreductase; KEGG: mpt:Mpe_A1030 putative conserved exported protein; FAD dependent oxidoreductase 2720556 5456312 Plav_2518 Parvibaculum lavamentivorans DS-1 FAD dependent oxidoreductase YP_001413784.1 2719432 R 402881 CDS YP_001413785.1 154252961 5455757 complement(2721016..2722539) 1 NC_009719.1 PFAM: sulfatase; KEGG: mlo:mlr3684 phosphonate monoester hydrolase; sulfatase 2722539 5455757 Plav_2519 Parvibaculum lavamentivorans DS-1 sulfatase YP_001413785.1 2721016 R 402881 CDS YP_001413786.1 154252962 5453804 2722766..2723086 1 NC_009719.1 PFAM: ferredoxin; KEGG: bra:BRADO5081 2Fe-2S ferredoxin (FdII); ferredoxin 2723086 5453804 Plav_2520 Parvibaculum lavamentivorans DS-1 ferredoxin YP_001413786.1 2722766 D 402881 CDS YP_001413787.1 154252963 5456940 complement(2723096..2723401) 1 NC_009719.1 PFAM: Chorismate mutase; KEGG: hne:HNE_0317 putative chorismate mutase, type II; chorismate mutase 2723401 5456940 Plav_2521 Parvibaculum lavamentivorans DS-1 chorismate mutase YP_001413787.1 2723096 R 402881 CDS YP_001413788.1 154252964 5454119 2723621..2724652 1 NC_009719.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpe:RPE_1478 thioredoxin-disulfide reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2724652 5454119 Plav_2522 Parvibaculum lavamentivorans DS-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001413788.1 2723621 D 402881 CDS YP_001413789.1 154252965 5453768 2724670..2724993 1 NC_009719.1 PFAM: ferredoxin; KEGG: rru:Rru_A2026 ferredoxin; ferredoxin 2724993 5453768 Plav_2523 Parvibaculum lavamentivorans DS-1 ferredoxin YP_001413789.1 2724670 D 402881 CDS YP_001413790.1 154252966 5456958 2725034..2725453 1 NC_009719.1 KEGG: gvi:gll2512 hypothetical protein; hypothetical protein 2725453 5456958 Plav_2524 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413790.1 2725034 D 402881 CDS YP_001413791.1 154252967 5453809 2725462..2726328 1 NC_009719.1 KEGG: bbt:BBta_2426 hypothetical protein; hypothetical protein 2726328 5453809 Plav_2525 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413791.1 2725462 D 402881 CDS YP_001413792.1 154252968 5454743 2726381..2726998 1 NC_009719.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmr:Mmar10_2552 methyltransferase type 11; type 11 methyltransferase 2726998 5454743 Plav_2526 Parvibaculum lavamentivorans DS-1 type 11 methyltransferase YP_001413792.1 2726381 D 402881 CDS YP_001413793.1 154252969 5453365 2727071..2727898 1 NC_009719.1 KEGG: bra:BRADO2645 hypothetical protein; hypothetical protein 2727898 5453365 Plav_2527 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413793.1 2727071 D 402881 CDS YP_001413794.1 154252970 5455444 complement(2727911..2728216) 1 NC_009719.1 hypothetical protein 2728216 5455444 Plav_2528 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413794.1 2727911 R 402881 CDS YP_001413795.1 154252971 5455574 complement(2728235..2728504) 1 NC_009719.1 hypothetical protein 2728504 5455574 Plav_2529 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413795.1 2728235 R 402881 CDS YP_001413796.1 154252972 5456288 2728618..2730264 1 NC_009719.1 involved in DNA repair; KEGG: mag:amb2999 nucleotidyltransferase/DNA polymerase involved in DNA repair; nucleotidyltransferase/DNA polymerase 2730264 5456288 Plav_2530 Parvibaculum lavamentivorans DS-1 nucleotidyltransferase/DNA polymerase YP_001413796.1 2728618 D 402881 CDS YP_001413797.1 154252973 5456012 2730261..2733518 1 NC_009719.1 KEGG: mmr:Mmar10_1831 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 2733518 5456012 Plav_2531 Parvibaculum lavamentivorans DS-1 DNA polymerase III subunit alpha YP_001413797.1 2730261 D 402881 CDS YP_001413798.1 154252974 5454277 complement(2733512..2733904) 1 NC_009719.1 KEGG: pmy:Pmen_3703 hypothetical protein; hypothetical protein 2733904 5454277 Plav_2532 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413798.1 2733512 R 402881 CDS YP_001413799.1 154252975 5455565 2734026..2735057 1 NC_009719.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sme:SMb20368 hypothetical protein; RND family efflux transporter MFP subunit 2735057 5455565 Plav_2533 Parvibaculum lavamentivorans DS-1 RND family efflux transporter MFP subunit YP_001413799.1 2734026 D 402881 CDS YP_001413800.1 154252976 5453995 2735066..2736316 1 NC_009719.1 PFAM: protein of unknown function DUF214; KEGG: mag:amb2765 ABC-type transport system; hypothetical protein 2736316 5453995 Plav_2534 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413800.1 2735066 D 402881 CDS YP_001413801.1 154252977 5453596 2736313..2737005 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb2766 ABC-type antimicrobial peptide transport system; ABC transporter-like protein 2737005 5453596 Plav_2535 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001413801.1 2736313 D 402881 CDS YP_001413802.1 154252978 5454947 complement(2737002..2738183) 1 NC_009719.1 KEGG: hypothetical protein; K09989 hypothetical protein; hypothetical protein 2738183 5454947 Plav_2536 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413802.1 2737002 R 402881 CDS YP_001413803.1 154252979 5453532 2738717..2739589 1 NC_009719.1 hypothetical protein 2739589 5453532 Plav_2537 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413803.1 2738717 D 402881 CDS YP_001413804.1 154252980 5453541 complement(2739966..2740709) 1 NC_009719.1 hypothetical protein 2740709 5453541 Plav_2538 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413804.1 2739966 R 402881 CDS YP_001413805.1 154252981 5455135 complement(2741010..2741621) 1 NC_009719.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ret:RHE_CH02733 probable SAM-dependent methyltransferase protein; type 11 methyltransferase 2741621 5455135 Plav_2539 Parvibaculum lavamentivorans DS-1 type 11 methyltransferase YP_001413805.1 2741010 R 402881 CDS YP_001413806.1 154252982 5454477 complement(2741715..2742230) 1 NC_009719.1 hypothetical protein 2742230 5454477 Plav_2540 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413806.1 2741715 R 402881 CDS YP_001413807.1 154252983 5453771 complement(2742562..2743407) 1 NC_009719.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rpd:RPD_3462 ATPase associated with various cellular activities, AAA_5; ATPase 2743407 5453771 Plav_2541 Parvibaculum lavamentivorans DS-1 ATPase YP_001413807.1 2742562 R 402881 CDS YP_001413808.1 154252984 5455515 2743762..2745126 1 NC_009719.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: bbt:BBta_7242 putative flagellar hook protein FlgE; hypothetical protein 2745126 5455515 Plav_2542 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413808.1 2743762 D 402881 CDS YP_001413809.1 154252985 5456887 2745204..2747045 1 NC_009719.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rpb:RPB_3816 flagellar hook-associated protein; flagellar hook-associated protein FlgK 2747045 5456887 Plav_2543 Parvibaculum lavamentivorans DS-1 flagellar hook-associated protein FlgK YP_001413809.1 2745204 D 402881 CDS YP_001413810.1 154252986 5454551 2747050..2748543 1 NC_009719.1 KEGG: nwi:Nwi_1101 hypothetical protein; hypothetical protein 2748543 5454551 Plav_2544 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413810.1 2747050 D 402881 CDS YP_001413811.1 154252987 5453882 complement(2748603..2749040) 1 NC_009719.1 KEGG: rle:RL0598 hypothetical protein; hypothetical protein 2749040 5453882 Plav_2545 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413811.1 2748603 R 402881 CDS YP_001413812.1 154252988 5456404 complement(2749037..2749678) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: hne:HNE_0025 transcriptional regulator, TetR family; TetR family transcriptional regulator 2749678 5456404 Plav_2546 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001413812.1 2749037 R 402881 CDS YP_001413813.1 154252989 5455377 2749880..2750671 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hne:HNE_3131 oxidoreductase, short chain dehydrogenase/reductase family protein; short-chain dehydrogenase/reductase SDR 2750671 5455377 Plav_2547 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001413813.1 2749880 D 402881 CDS YP_001413814.1 154252990 5454197 complement(2750682..2751857) 1 NC_009719.1 PFAM: CBS domain containing protein; HPP family protein?; KEGG: pde:Pden_0317 CBS domain containing protein; HPP family protein 2751857 5454197 Plav_2548 Parvibaculum lavamentivorans DS-1 HPP family protein YP_001413814.1 2750682 R 402881 CDS YP_001413815.1 154252991 5456019 complement(2751979..2752356) 1 NC_009719.1 PFAM: flagellar FlaF family protein; KEGG: rpd:RPD_1673 flagellar FlaF; flagellar FlaF family protein 2752356 5456019 Plav_2549 Parvibaculum lavamentivorans DS-1 flagellar FlaF family protein YP_001413815.1 2751979 R 402881 CDS YP_001413816.1 154252992 5456153 complement(2752340..2752732) 1 NC_009719.1 PFAM: flagellar FlbT family protein; KEGG: bja:blr5847 putative flagellar protein FlbT; flagellar FlbT family protein 2752732 5456153 Plav_2550 Parvibaculum lavamentivorans DS-1 flagellar FlbT family protein YP_001413816.1 2752340 R 402881 CDS YP_001413817.1 154252993 5457001 complement(2752937..2754064) 1 NC_009719.1 KEGG: bbt:BBta_5530 putative flagellin protein, C-terminus; putative flagellin protein, C-terminus 2754064 5457001 Plav_2551 Parvibaculum lavamentivorans DS-1 putative flagellin protein, C-terminus YP_001413817.1 2752937 R 402881 CDS YP_001413818.1 154252994 5453673 complement(2754257..2755438) 1 NC_009719.1 KEGG: nha:Nham_1336 hypothetical protein; hypothetical protein 2755438 5453673 Plav_2552 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413818.1 2754257 R 402881 CDS YP_001413819.1 154252995 5454530 complement(2755816..2757459) 1 NC_009719.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mca:MCA1512 TPR domain protein; hypothetical protein 2757459 5454530 Plav_2553 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413819.1 2755816 R 402881 CDS YP_001413820.1 154252996 5453741 complement(2757544..2758020) 1 NC_009719.1 KEGG: mmr:Mmar10_1954 flagellar basal-body protein FlbY; hypothetical protein 2758020 5453741 Plav_2554 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413820.1 2757544 R 402881 CDS YP_001413821.1 154252997 5455121 complement(2758017..2758346) 1 NC_009719.1 KEGG: chemotactic signal-response protein CheL; hypothetical protein 2758346 5455121 Plav_2555 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413821.1 2758017 R 402881 CDS YP_001413822.1 154252998 5454751 complement(2758346..2759482) 1 NC_009719.1 PFAM: flagellar P-ring protein; KEGG: nwi:Nwi_1111 flagellar P-ring protein precursor; flagellar P-ring protein 2759482 5454751 Plav_2556 Parvibaculum lavamentivorans DS-1 flagellar P-ring protein YP_001413822.1 2758346 R 402881 CDS YP_001413823.1 154252999 5453850 2759757..2760182 1 NC_009719.1 regulator of the sigma 54 transcriptional activator FlbD; represses FlbD when the class II flagellar structure is absent and activates FlbD when the structure is present; flagellar assembly regulator FliX 2760182 fliX 5453850 fliX Parvibaculum lavamentivorans DS-1 flagellar assembly regulator FliX YP_001413823.1 2759757 D 402881 CDS YP_001413824.1 154253000 5455124 2760313..2760753 1 NC_009719.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: mlo:mll0773 DnaK suppressor protein; TraR/DksA family transcriptional regulator 2760753 5455124 Plav_2558 Parvibaculum lavamentivorans DS-1 TraR/DksA family transcriptional regulator YP_001413824.1 2760313 D 402881 CDS YP_001413825.1 154253001 5456235 complement(2760833..2761567) 1 NC_009719.1 PFAM: flagellar L-ring protein; KEGG: mmr:Mmar10_1949 flagellar L-ring protein; flagellar L-ring protein 2761567 5456235 Plav_2559 Parvibaculum lavamentivorans DS-1 flagellar L-ring protein YP_001413825.1 2760833 R 402881 CDS YP_001413826.1 154253002 5456011 complement(2761591..2762571) 1 NC_009719.1 required for the assembly of the flagellar basal body P-ring; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA 2762571 flgA 5456011 flgA Parvibaculum lavamentivorans DS-1 flagellar basal body P-ring biosynthesis protein FlgA YP_001413826.1 2761591 R 402881 CDS YP_001413827.1 154253003 5455388 complement(2762582..2763367) 1 NC_009719.1 makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; flagellar basal body rod protein FlgG 2763367 flgG 5455388 flgG Parvibaculum lavamentivorans DS-1 flagellar basal body rod protein FlgG YP_001413827.1 2762582 R 402881 CDS YP_001413828.1 154253004 5454866 complement(2763397..2764167) 1 NC_009719.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mag:amb3496 flagellar basal body rod protein; flagellar basal body rod protein 2764167 5454866 Plav_2562 Parvibaculum lavamentivorans DS-1 flagellar basal body rod protein YP_001413828.1 2763397 R 402881 CDS YP_001413829.1 154253005 5453885 2764470..2764973 1 NC_009719.1 PFAM: flagellar basal body-associated protein FliL; KEGG: mag:amb3497 flagellar basal body-associated protein; flagellar basal body-associated protein FliL 2764973 5453885 Plav_2563 Parvibaculum lavamentivorans DS-1 flagellar basal body-associated protein FliL YP_001413829.1 2764470 D 402881 CDS YP_001413830.1 154253006 5456122 2765001..2766125 1 NC_009719.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar motor switch protein FliM 2766125 fliM 5456122 fliM Parvibaculum lavamentivorans DS-1 flagellar motor switch protein FliM YP_001413830.1 2765001 D 402881 CDS YP_001413831.1 154253007 5454948 2766122..2766601 1 NC_009719.1 KEGG: mag:amb3499 hypothetical protein; hypothetical protein 2766601 5454948 Plav_2565 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413831.1 2766122 D 402881 CDS YP_001413832.1 154253008 5453552 2766626..2767387 1 NC_009719.1 KEGG: bja:bll5823 hypothetical protein; hypothetical protein 2767387 5453552 Plav_2566 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413832.1 2766626 D 402881 CDS YP_001413833.1 154253009 5455016 2767504..2770929 1 NC_009719.1 KEGG: mmr:Mmar10_1941 hypothetical protein; hypothetical protein 2770929 5455016 Plav_2567 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413833.1 2767504 D 402881 CDS YP_001413834.1 154253010 5456495 complement(2770926..2771672) 1 NC_009719.1 TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; KEGG: mmr:Mmar10_1940 flagellar biosynthetic protein FliP; flagellar biosynthetic protein FliP 2771672 5456495 Plav_2568 Parvibaculum lavamentivorans DS-1 flagellar biosynthetic protein FliP YP_001413834.1 2770926 R 402881 CDS YP_001413835.1 154253011 5455372 complement(2771669..2772043) 1 NC_009719.1 KEGG: rru:Rru_A2829 hypothetical protein; hypothetical protein 2772043 5455372 Plav_2569 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413835.1 2771669 R 402881 CDS YP_001413836.1 154253012 5454168 2772324..2772752 1 NC_009719.1 KEGG: rpb:RPB_3777 flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB 2772752 5454168 Plav_2570 Parvibaculum lavamentivorans DS-1 flagellar basal-body rod protein FlgB YP_001413836.1 2772324 D 402881 CDS YP_001413837.1 154253013 5453648 2772777..2773196 1 NC_009719.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 2773196 flgC 5453648 flgC Parvibaculum lavamentivorans DS-1 flagellar basal body rod protein FlgC YP_001413837.1 2772777 D 402881 CDS YP_001413838.1 154253014 5455003 2773210..2773533 1 NC_009719.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: fliE; flagellar hook-basal body complex protein FliE; K02408 flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit FliE 2773533 5455003 Plav_2572 Parvibaculum lavamentivorans DS-1 flagellar hook-basal body complex subunit FliE YP_001413838.1 2773210 D 402881 CDS YP_001413839.1 154253015 5455022 2773567..2773830 1 NC_009719.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: rpa:RPA3885 putative flagellar biosynthesis protein fliQ; flagellar biosynthetic protein FliQ 2773830 5455022 Plav_2573 Parvibaculum lavamentivorans DS-1 flagellar biosynthetic protein FliQ YP_001413839.1 2773567 D 402881 CDS YP_001413840.1 154253016 5453792 2773846..2774607 1 NC_009719.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 2774607 fliR 5453792 fliR Parvibaculum lavamentivorans DS-1 flagellar biosynthesis protein FliR YP_001413840.1 2773846 D 402881 CDS YP_001413841.1 154253017 5455138 2774623..2775702 1 NC_009719.1 TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: rpc:RPC_1522 flagellar biosynthetic protein FlhB; flagellar biosynthetic protein FlhB 2775702 5455138 Plav_2575 Parvibaculum lavamentivorans DS-1 flagellar biosynthetic protein FlhB YP_001413841.1 2774623 D 402881 CDS YP_001413842.1 154253018 5456935 2775763..2778285 1 NC_009719.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: bmb:BruAb1_1044 sensory box histidine kinase/response regulator; multi-sensor hybrid histidine kinase 2778285 5456935 Plav_2576 Parvibaculum lavamentivorans DS-1 multi-sensor hybrid histidine kinase YP_001413842.1 2775763 D 402881 CDS YP_001413843.1 154253019 5456099 2778303..2779418 1 NC_009719.1 PFAM: fatty acid desaturase; KEGG: abo:ABO_2546 fatty acid desaturase, putative; fatty acid desaturase 2779418 5456099 Plav_2577 Parvibaculum lavamentivorans DS-1 fatty acid desaturase YP_001413843.1 2778303 D 402881 CDS YP_001413844.1 154253020 5454886 2779542..2780639 1 NC_009719.1 KEGG: mlo:mlr0030 recombination protein recA; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase; recA protein 2780639 5454886 Plav_2578 Parvibaculum lavamentivorans DS-1 recA protein YP_001413844.1 2779542 D 402881 CDS YP_001413845.1 154253021 5454726 2780805..2783546 1 NC_009719.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 2783546 alaS 5454726 alaS Parvibaculum lavamentivorans DS-1 alanyl-tRNA synthetase YP_001413845.1 2780805 D 402881 CDS YP_001413846.1 154253022 5454350 complement(2784189..2785412) 1 NC_009719.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 2785412 5454350 Plav_2580 Parvibaculum lavamentivorans DS-1 isocitrate dehydrogenase YP_001413846.1 2784189 R 402881 CDS YP_001413847.1 154253023 5454335 2785580..2786368 1 NC_009719.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rru:Rru_A0696 RNA methyltransferase TrmH, group 1; RNA methyltransferase 2786368 5454335 Plav_2581 Parvibaculum lavamentivorans DS-1 RNA methyltransferase YP_001413847.1 2785580 D 402881 CDS YP_001413848.1 154253024 5453861 2788029..2788649 1 NC_009719.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 2788649 rpsD 5453861 rpsD Parvibaculum lavamentivorans DS-1 30S ribosomal protein S4 YP_001413848.1 2788029 D 402881 CDS YP_001413849.1 154253025 5453737 complement(2788722..2789060) 1 NC_009719.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: mag:amb2117 glutaredoxin-related protein; glutaredoxin-like protein 2789060 5453737 Plav_2584 Parvibaculum lavamentivorans DS-1 glutaredoxin-like protein YP_001413849.1 2788722 R 402881 CDS YP_001413850.1 154253026 5453537 complement(2789100..2789336) 1 NC_009719.1 PFAM: BolA family protein; KEGG: mes:Meso_1276 BolA-like protein; BolA family protein 2789336 5453537 Plav_2585 Parvibaculum lavamentivorans DS-1 BolA family protein YP_001413850.1 2789100 R 402881 CDS YP_001413851.1 154253027 5456116 complement(2789368..2791587) 1 NC_009719.1 TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: bja:bll5719 phosphoribosylformylglycinamidine synthetase II; phosphoribosylformylglycinamidine synthase II 2791587 5456116 Plav_2586 Parvibaculum lavamentivorans DS-1 phosphoribosylformylglycinamidine synthase II YP_001413851.1 2789368 R 402881 CDS YP_001413852.1 154253028 5453746 complement(2791584..2792252) 1 NC_009719.1 TIGRFAM: phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: mes:Meso_1279 phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase I 2792252 5453746 Plav_2587 Parvibaculum lavamentivorans DS-1 phosphoribosylformylglycinamidine synthase I YP_001413852.1 2791584 R 402881 CDS YP_001413853.1 154253029 5456482 complement(2792255..2792500) 1 NC_009719.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: mag:amb1540 phosphoribosylformylglycinamidine synthase; phosphoribosylformylglycinamidine synthase subunit PurS 2792500 5456482 Plav_2588 Parvibaculum lavamentivorans DS-1 phosphoribosylformylglycinamidine synthase subunit PurS YP_001413853.1 2792255 R 402881 CDS YP_001413854.1 154253030 5454946 complement(2792512..2793273) 1 NC_009719.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; KEGG: rpe:RPE_1607 phosphoribosylaminoimidazole-succinocarboxamide synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 2793273 5454946 Plav_2589 Parvibaculum lavamentivorans DS-1 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_001413854.1 2792512 R 402881 CDS YP_001413855.1 154253031 5456942 2793621..2793938 1 NC_009719.1 PFAM: protein of unknown function DUF1476; KEGG: bbt:BBta_5410 hypothetical protein; hypothetical protein 2793938 5456942 Plav_2590 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413855.1 2793621 D 402881 CDS YP_001413856.1 154253032 5454545 complement(2793948..2794454) 1 NC_009719.1 PFAM: protein of unknown function DUF1457; hypothetical protein 2794454 5454545 Plav_2591 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413856.1 2793948 R 402881 CDS YP_001413857.1 154253033 5454543 complement(2794563..2795267) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: mbb:BCG_0369c hypothetical protein; regulatory protein TetR 2795267 5454543 Plav_2592 Parvibaculum lavamentivorans DS-1 regulatory protein TetR YP_001413857.1 2794563 R 402881 CDS YP_001413858.1 154253034 5454590 2795371..2797290 1 NC_009719.1 PFAM: Pyrrolo-quinoline quinone; KEGG: swi:Swit_1054 quinoprotein glucose dehydrogenase; quinoprotein glucose dehydrogenase 2797290 5454590 Plav_2593 Parvibaculum lavamentivorans DS-1 quinoprotein glucose dehydrogenase YP_001413858.1 2795371 D 402881 CDS YP_001413859.1 154253035 5455509 complement(2797294..2798016) 1 NC_009719.1 PFAM: Phosphoglycerate mutase; KEGG: hne:HNE_1982 phosphoglycerate mutase family protein; phosphoglycerate mutase 2798016 5455509 Plav_2594 Parvibaculum lavamentivorans DS-1 phosphoglycerate mutase YP_001413859.1 2797294 R 402881 CDS YP_001413860.1 154253036 5455235 complement(2798089..2798487) 1 NC_009719.1 PFAM: PilT protein domain protein; KEGG: atc:AGR_L_3577 hypothetical protein; PilT domain-containing protein 2798487 5455235 Plav_2595 Parvibaculum lavamentivorans DS-1 PilT domain-containing protein YP_001413860.1 2798089 R 402881 CDS YP_001413861.1 154253037 5453591 complement(2798492..2798731) 1 NC_009719.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: atc:AGR_L_3576 hypothetical protein; AbrB family transcriptional regulator 2798731 5453591 Plav_2596 Parvibaculum lavamentivorans DS-1 AbrB family transcriptional regulator YP_001413861.1 2798492 R 402881 CDS YP_001413862.1 154253038 5456613 complement(2798804..2800141) 1 NC_009719.1 TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: mlo:mll0079 adenylosuccinate lyase; adenylosuccinate lyase 2800141 5456613 Plav_2597 Parvibaculum lavamentivorans DS-1 adenylosuccinate lyase YP_001413862.1 2798804 R 402881 CDS YP_001413863.1 154253039 5454126 2800308..2801732 1 NC_009719.1 PFAM: Amidase; KEGG: rpa:RPA3959 putative amidase; amidase 2801732 5454126 Plav_2598 Parvibaculum lavamentivorans DS-1 amidase YP_001413863.1 2800308 D 402881 CDS YP_001413864.1 154253040 5454357 complement(2802319..2803011) 1 NC_009719.1 PFAM: DNA repair protein RadC; KEGG: nha:Nham_0430 DNA repair protein RadC; DNA repair protein RadC 2803011 5454357 Plav_2599 Parvibaculum lavamentivorans DS-1 DNA repair protein RadC YP_001413864.1 2802319 R 402881 CDS YP_001413865.1 154253041 5456315 complement(2803021..2803842) 1 NC_009719.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: rle:RL2069 putative methionine aminopeptidase; methionine aminopeptidase 2803842 5456315 Plav_2600 Parvibaculum lavamentivorans DS-1 methionine aminopeptidase YP_001413865.1 2803021 R 402881 CDS YP_001413866.1 154253042 5455030 2804023..2804790 1 NC_009719.1 PFAM: molybdopterin binding domain; KEGG: mlo:mll0144 hypothetical protein; molybdopterin-binding domain-containing protein 2804790 5455030 Plav_2601 Parvibaculum lavamentivorans DS-1 molybdopterin-binding domain-containing protein YP_001413866.1 2804023 D 402881 CDS YP_001413867.1 154253043 5455379 2805649..2806416 1 NC_009719.1 KEGG: saz:Sama_2652 conserved hypothetical protein; hypothetical protein 2806416 5455379 Plav_2602 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413867.1 2805649 D 402881 CDS YP_001413868.1 154253044 5455797 2806469..2808526 1 NC_009719.1 proton-motive-force-driven choline transporter; choline transport protein BetT 2808526 5455797 Plav_2603 Parvibaculum lavamentivorans DS-1 choline transport protein BetT YP_001413868.1 2806469 D 402881 CDS YP_001413869.1 154253045 5455046 2808569..2810257 1 NC_009719.1 TIGRFAM: choline dehydrogenase; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: sdn:Sden_0715 choline dehydrogenase; choline dehydrogenase 2810257 5455046 Plav_2604 Parvibaculum lavamentivorans DS-1 choline dehydrogenase YP_001413869.1 2808569 D 402881 CDS YP_001413870.1 154253046 5455538 complement(2810259..2810522) 1 NC_009719.1 KEGG: mes:Meso_1118 hypothetical protein; hypothetical protein 2810522 5455538 Plav_2605 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413870.1 2810259 R 402881 CDS YP_001413871.1 154253047 5453568 2811254..2811937 1 NC_009719.1 hypothetical protein 2811937 5453568 Plav_2606 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413871.1 2811254 D 402881 CDS YP_001413872.1 154253048 5455473 complement(2812001..2814787) 1 NC_009719.1 KEGG: cch:Cag_1309 methylase; methylase 2814787 5455473 Plav_2607 Parvibaculum lavamentivorans DS-1 methylase YP_001413872.1 2812001 R 402881 CDS YP_001413873.1 154253049 5453519 complement(2814974..2815693) 1 NC_009719.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bam:Bamb_2589 transcriptional regulator, Crp/Fnr family; CRP/FNR family transcriptional regulator 2815693 5453519 Plav_2608 Parvibaculum lavamentivorans DS-1 CRP/FNR family transcriptional regulator YP_001413873.1 2814974 R 402881 CDS YP_001413874.1 154253050 5454600 2815816..2816589 1 NC_009719.1 PFAM: class II aldolase/adducin family protein; KEGG: pat:Patl_3366 class II aldolase/adducin-like; class II aldolase/adducin family protein 2816589 5454600 Plav_2609 Parvibaculum lavamentivorans DS-1 class II aldolase/adducin family protein YP_001413874.1 2815816 D 402881 CDS YP_001413875.1 154253051 5453497 2816716..2817288 1 NC_009719.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: pfl:PFL_1586 hypothetical protein; metal dependent phosphohydrolase 2817288 5453497 Plav_2610 Parvibaculum lavamentivorans DS-1 metal dependent phosphohydrolase YP_001413875.1 2816716 D 402881 CDS YP_001413876.1 154253052 5454645 2817436..2818878 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: ter:Tery_2105 sodium:galactoside symporter family protein; major facilitator superfamily transporter 2818878 5454645 Plav_2611 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001413876.1 2817436 D 402881 CDS YP_001413877.1 154253053 5456329 2818881..2819633 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: rpb:RPB_2134 alpha/beta hydrolase; alpha/beta hydrolase fold protein 2819633 5456329 Plav_2612 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001413877.1 2818881 D 402881 CDS YP_001413878.1 154253054 5455901 2819661..2821022 1 NC_009719.1 KEGG: ter:Tery_2105 sodium:galactoside symporter family protein; sodium:galactoside symporter family protein 2821022 5455901 Plav_2613 Parvibaculum lavamentivorans DS-1 sodium:galactoside symporter family protein YP_001413878.1 2819661 D 402881 CDS YP_001413879.1 154253055 5456395 complement(2821027..2822283) 1 NC_009719.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rha:RHA1_ro06259 probable amidohydrolase; amidohydrolase 2822283 5456395 Plav_2614 Parvibaculum lavamentivorans DS-1 amidohydrolase YP_001413879.1 2821027 R 402881 CDS YP_001413880.1 154253056 5455761 2822375..2823121 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: bmb:BruAb1_1266 hydrolase, alpha/beta hydrolase fold family; alpha/beta hydrolase fold protein 2823121 5455761 Plav_2615 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001413880.1 2822375 D 402881 CDS YP_001413881.1 154253057 5453378 complement(2823336..2824127) 1 NC_009719.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 2824127 5453378 Plav_2616 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001413881.1 2823336 R 402881 CDS YP_001413882.1 154253058 5455256 complement(2824217..2824579) 1 NC_009719.1 hypothetical protein 2824579 5455256 Plav_2617 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413882.1 2824217 R 402881 CDS YP_001413883.1 154253059 5456174 2824691..2825083 1 NC_009719.1 PFAM: protein of unknown function DUF427; KEGG: rpb:RPB_3711 protein of unknown function DUF427; hypothetical protein 2825083 5456174 Plav_2618 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413883.1 2824691 D 402881 CDS YP_001413884.1 154253060 5456266 complement(2825107..2825970) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase; short-chain dehydrogenase/reductase SDR 2825970 5456266 Plav_2619 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001413884.1 2825107 R 402881 CDS YP_001413885.1 154253061 5453377 complement(2826184..2826984) 1 NC_009719.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2826984 5453377 Plav_2620 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase YP_001413885.1 2826184 R 402881 CDS YP_001413886.1 154253062 5454260 complement(2827161..2828699) 1 NC_009719.1 PFAM: sulfatase; KEGG: cno:NT01CX_0300 probable sulfatase; sulfatase 2828699 5454260 Plav_2621 Parvibaculum lavamentivorans DS-1 sulfatase YP_001413886.1 2827161 R 402881 CDS YP_001413887.1 154253063 5454382 complement(2829088..2829291) 1 NC_009719.1 hypothetical protein 2829291 5454382 Plav_2622 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413887.1 2829088 R 402881 CDS YP_001413888.1 154253064 5454419 complement(2829376..2830185) 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: rha:RHA1_ro03350 probable hydrolase; alpha/beta hydrolase fold protein 2830185 5454419 Plav_2623 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001413888.1 2829376 R 402881 CDS YP_001413889.1 154253065 5453616 2830378..2831205 1 NC_009719.1 TIGRFAM: serine O-acetyltransferase; PFAM: serine acetyltransferase domain protein; KEGG: rpc:RPC_3144 serine O-acetyltransferase; serine O-acetyltransferase 2831205 5453616 Plav_2624 Parvibaculum lavamentivorans DS-1 serine O-acetyltransferase YP_001413889.1 2830378 D 402881 CDS YP_001413890.1 154253066 5453705 complement(2831213..2832484) 1 NC_009719.1 PFAM: FAD dependent oxidoreductase; KEGG: rsq:Rsph17025_0863 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2832484 5453705 Plav_2625 Parvibaculum lavamentivorans DS-1 FAD dependent oxidoreductase YP_001413890.1 2831213 R 402881 CDS YP_001413891.1 154253067 5454081 complement(2832491..2832766) 1 NC_009719.1 hypothetical protein 2832766 5454081 Plav_2626 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413891.1 2832491 R 402881 CDS YP_001413892.1 154253068 5453555 2832918..2833724 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mpt:Mpe_A0884 dehydrogenase; short-chain dehydrogenase/reductase SDR 2833724 5453555 Plav_2627 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001413892.1 2832918 D 402881 CDS YP_001413893.1 154253069 5454761 2834065..2834277 1 NC_009719.1 KEGG: mes:Meso_1728 hypothetical protein; hypothetical protein 2834277 5454761 Plav_2628 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413893.1 2834065 D 402881 CDS YP_001413894.1 154253070 5454745 complement(2834280..2835056) 1 NC_009719.1 KEGG: ret:RHE_CH02210 hypothetical protein; hypothetical protein 2835056 5454745 Plav_2629 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413894.1 2834280 R 402881 CDS YP_001413895.1 154253071 5455495 2835271..2835636 1 NC_009719.1 hypothetical protein 2835636 5455495 Plav_2630 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413895.1 2835271 D 402881 CDS YP_001413896.1 154253072 5453547 2835675..2835986 1 NC_009719.1 KEGG: bra:BRADO2943 conserved hypothetical protein; putative membrane protein; putative exported protein; hypothetical protein 2835986 5453547 Plav_2631 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413896.1 2835675 D 402881 CDS YP_001413897.1 154253073 5454800 complement(2835983..2837077) 1 NC_009719.1 KEGG: rpe:RPE_2309 hypothetical protein; hypothetical protein 2837077 5454800 Plav_2632 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413897.1 2835983 R 402881 CDS YP_001413898.1 154253074 5454398 complement(2837157..2839148) 1 NC_009719.1 PFAM: protein of unknown function DUF839; KEGG: mes:Meso_0954 twin-arginine translocation pathway signal; hypothetical protein 2839148 5454398 Plav_2633 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413898.1 2837157 R 402881 CDS YP_001413899.1 154253075 5453997 2839296..2839826 1 NC_009719.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: bacterial transferase family protein; hexapaptide repeat-containing transferase 2839826 5453997 Plav_2634 Parvibaculum lavamentivorans DS-1 hexapaptide repeat-containing transferase YP_001413899.1 2839296 D 402881 CDS YP_001413900.1 154253076 5453361 2839826..2840299 1 NC_009719.1 PFAM: protein of unknown function DUF192; KEGG: rpd:RPD_2531 protein of unknown function DUF192; hypothetical protein 2840299 5453361 Plav_2635 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413900.1 2839826 D 402881 CDS YP_001413901.1 154253077 5456986 2840361..2841185 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpd:RPD_3917 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 2841185 5456986 Plav_2636 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001413901.1 2840361 D 402881 CDS YP_001413902.1 154253078 5453563 2841264..2842427 1 NC_009719.1 hypothetical protein 2842427 5453563 Plav_2637 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413902.1 2841264 D 402881 CDS YP_001413903.1 154253079 5454784 complement(2842446..2842895) 1 NC_009719.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: mes:Meso_1471 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 2842895 5454784 Plav_2638 Parvibaculum lavamentivorans DS-1 FKBP-type peptidylprolyl isomerase YP_001413903.1 2842446 R 402881 CDS YP_001413904.1 154253080 5456971 complement(2843049..2843858) 1 NC_009719.1 KEGG: mmr:Mmar10_1074 hypothetical protein; hypothetical protein 2843858 5456971 Plav_2639 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413904.1 2843049 R 402881 CDS YP_001413905.1 154253081 5453515 2844050..2844823 1 NC_009719.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2844823 5453515 Plav_2640 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase YP_001413905.1 2844050 D 402881 CDS YP_001413906.1 154253082 5454172 complement(2844923..2845681) 1 NC_009719.1 PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: bbt:BBta_5218 putative exported protein of unknown function; transglutaminase 2845681 5454172 Plav_2641 Parvibaculum lavamentivorans DS-1 transglutaminase YP_001413906.1 2844923 R 402881 CDS YP_001413907.1 154253083 5454440 complement(2846014..2846721) 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: hne:HNE_2777 enoyl-CoA hydratase/isomerase family protein; enoyl-CoA hydratase/isomerase 2846721 5454440 Plav_2642 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001413907.1 2846014 R 402881 CDS YP_001413908.1 154253084 5456890 complement(2846764..2847381) 1 NC_009719.1 PFAM: type IV pilus assembly PilZ; KEGG: mes:Meso_1725 type IV pilus assembly PilZ; type IV pilus assembly PilZ 2847381 5456890 Plav_2643 Parvibaculum lavamentivorans DS-1 type IV pilus assembly PilZ YP_001413908.1 2846764 R 402881 CDS YP_001413909.1 154253085 5456666 2847636..2849360 1 NC_009719.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 2849360 5456666 Plav_2644 Parvibaculum lavamentivorans DS-1 choline dehydrogenase YP_001413909.1 2847636 D 402881 CDS YP_001413910.1 154253086 5455115 complement(2849440..2850111) 1 NC_009719.1 PFAM: protein of unknown function DUF1457; KEGG: mes:Meso_1724 hypothetical protein; hypothetical protein 2850111 5455115 Plav_2645 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413910.1 2849440 R 402881 CDS YP_001413911.1 154253087 5454711 2850575..2851495 1 NC_009719.1 KEGG: mmr:Mmar10_1077 hypothetical protein; hypothetical protein 2851495 5454711 Plav_2646 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413911.1 2850575 D 402881 CDS YP_001413912.1 154253088 5454062 complement(2851700..2852131) 1 NC_009719.1 KEGG: psa:PST_0360 hypothetical protein; hypothetical protein 2852131 5454062 Plav_2647 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413912.1 2851700 R 402881 CDS YP_001413913.1 154253089 5456239 complement(2852218..2852661) 1 NC_009719.1 KEGG: psa:PST_0360 hypothetical protein; hypothetical protein 2852661 5456239 Plav_2648 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413913.1 2852218 R 402881 CDS YP_001413914.1 154253090 5455470 complement(2852751..2853251) 1 NC_009719.1 KEGG: reh:H16_A3181 hypothetical protein; hypothetical protein 2853251 5455470 Plav_2649 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413914.1 2852751 R 402881 CDS YP_001413915.1 154253091 5456801 2853444..2853761 1 NC_009719.1 PFAM: small multidrug resistance protein; KEGG: ent:Ent638_0337 small multidrug resistance protein; small multidrug resistance protein 2853761 5456801 Plav_2650 Parvibaculum lavamentivorans DS-1 small multidrug resistance protein YP_001413915.1 2853444 D 402881 CDS YP_001413916.1 154253092 5456804 complement(2853970..2854998) 1 NC_009719.1 KEGG: HfaB protein; HfaB protein 2854998 5456804 Plav_2651 Parvibaculum lavamentivorans DS-1 HfaB protein YP_001413916.1 2853970 R 402881 CDS YP_001413917.1 154253093 5456921 2855303..2855959 1 NC_009719.1 PFAM: DSBA oxidoreductase; KEGG: rpb:RPB_3208 DsbA oxidoreductase; DSBA oxidoreductase 2855959 5456921 Plav_2652 Parvibaculum lavamentivorans DS-1 DSBA oxidoreductase YP_001413917.1 2855303 D 402881 CDS YP_001413918.1 154253094 5454451 2855952..2856752 1 NC_009719.1 PFAM: Rhomboid family protein; KEGG: sme:SMc01001 hypothetical protein; rhomboid family protein 2856752 5454451 Plav_2653 Parvibaculum lavamentivorans DS-1 rhomboid family protein YP_001413918.1 2855952 D 402881 CDS YP_001413919.1 154253095 5454618 2856832..2857167 1 NC_009719.1 KEGG: tcx:Tcr_2034 lipase-like; hypothetical protein 2857167 5454618 Plav_2654 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413919.1 2856832 D 402881 CDS YP_001413920.1 154253096 5453629 complement(2857151..2857831) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: sen:SACE_0012 TetR-family transcriptional regulator; TetR family transcriptional regulator 2857831 5453629 Plav_2655 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001413920.1 2857151 R 402881 CDS YP_001413921.1 154253097 5453609 2857944..2859377 1 NC_009719.1 PFAM: Carotenoid oxygenase; KEGG: bbt:BBta_5477 putative carotenoid oxygenase; carotenoid oxygenase 2859377 5453609 Plav_2656 Parvibaculum lavamentivorans DS-1 carotenoid oxygenase YP_001413921.1 2857944 D 402881 CDS YP_001413922.1 154253098 5453406 complement(2859604..2860212) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: hch:HCH_02930 transcriptional regulator; TetR family transcriptional regulator 2860212 5453406 Plav_2657 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001413922.1 2859604 R 402881 CDS YP_001413923.1 154253099 5454157 2860298..2860699 1 NC_009719.1 PFAM: YCII-related; KEGG: sth:STH1648 hypothetical protein; hypothetical protein 2860699 5454157 Plav_2658 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413923.1 2860298 D 402881 CDS YP_001413924.1 154253100 5454021 complement(2860711..2861310) 1 NC_009719.1 KEGG: bja:bll0405 hypothetical protein; hypothetical protein 2861310 5454021 Plav_2659 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413924.1 2860711 R 402881 CDS YP_001413925.1 154253101 5457019 complement(2861307..2862602) 1 NC_009719.1 KEGG: mmr:Mmar10_1086 membrane protein-like protein; membrane protein 2862602 5457019 Plav_2660 Parvibaculum lavamentivorans DS-1 membrane protein YP_001413925.1 2861307 R 402881 CDS YP_001413926.1 154253102 5455568 2862760..2863293 1 NC_009719.1 PFAM: CBS domain containing protein; KEGG: bra:BRADO2961 conserved hypothetical protein with 2 CBS domains; signal-transduction protein 2863293 5455568 Plav_2661 Parvibaculum lavamentivorans DS-1 signal-transduction protein YP_001413926.1 2862760 D 402881 CDS YP_001413927.1 154253103 5455418 complement(2863299..2864405) 1 NC_009719.1 PFAM: Patatin; KEGG: rpd:RPD_3270 patatin; patatin 2864405 5455418 Plav_2662 Parvibaculum lavamentivorans DS-1 patatin YP_001413927.1 2863299 R 402881 CDS YP_001413928.1 154253104 5457016 complement(2864661..2865113) 1 NC_009719.1 PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: rpa:RPA3390 phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 2865113 5457016 Plav_2663 Parvibaculum lavamentivorans DS-1 phosphoribosyl-AMP cyclohydrolase YP_001413928.1 2864661 R 402881 CDS YP_001413929.1 154253105 5453373 complement(2865179..2865847) 1 NC_009719.1 PFAM: GTP cyclohydrolase I; KEGG: mmr:Mmar10_2399 GTP cyclohydrolase I; GTP cyclohydrolase I 2865847 5453373 Plav_2664 Parvibaculum lavamentivorans DS-1 GTP cyclohydrolase I YP_001413929.1 2865179 R 402881 CDS YP_001413930.1 154253106 5453635 2866355..2867761 1 NC_009719.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2867761 cysS 5453635 cysS Parvibaculum lavamentivorans DS-1 cysteinyl-tRNA synthetase YP_001413930.1 2866355 D 402881 CDS YP_001413931.1 154253107 5454108 2867762..2868262 1 NC_009719.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: rpe:RPE_2347 nitrogen-fixing NifU domain protein; NifU domain-containing protein 2868262 5454108 Plav_2666 Parvibaculum lavamentivorans DS-1 NifU domain-containing protein YP_001413931.1 2867762 D 402881 CDS YP_001413932.1 154253108 5456898 2868420..2868734 1 NC_009719.1 PFAM: protein of unknown function DUF37; KEGG: bov:BOV_1039 conserved hypothetical protein TIGR00278; hypothetical protein 2868734 5456898 Plav_2667 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413932.1 2868420 D 402881 CDS YP_001413933.1 154253109 5454215 2868744..2870702 1 NC_009719.1 TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); TGS domain protein; Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; KEGG: hne:HNE_3196 threonyl-tRNA synthetase; threonyl-tRNA synthetase 2870702 5454215 Plav_2668 Parvibaculum lavamentivorans DS-1 threonyl-tRNA synthetase YP_001413933.1 2868744 D 402881 CDS YP_001413934.1 154253110 5456976 complement(2870850..2871248) 1 NC_009719.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: aba:Acid345_4170 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 2871248 5456976 Plav_2669 Parvibaculum lavamentivorans DS-1 3-demethylubiquinone-9 3-methyltransferase YP_001413934.1 2870850 R 402881 CDS YP_001413935.1 154253111 5455342 complement(2871266..2871808) 1 NC_009719.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mxa:MXAN_0676 Aha1 domain protien; activator of Hsp90 ATPase 1 family protein 2871808 5455342 Plav_2670 Parvibaculum lavamentivorans DS-1 activator of Hsp90 ATPase 1 family protein YP_001413935.1 2871266 R 402881 CDS YP_001413936.1 154253112 5455371 complement(2871840..2872160) 1 NC_009719.1 PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: neu:NE0263 bacterial regulatory proteins, ArsR family; regulatory protein ArsR 2872160 5455371 Plav_2671 Parvibaculum lavamentivorans DS-1 regulatory protein ArsR YP_001413936.1 2871840 R 402881 CDS YP_001413937.1 154253113 5456943 2872303..2874057 1 NC_009719.1 KEGG: bba:Bd1177 hypothetical protein; hypothetical protein 2874057 5456943 Plav_2672 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413937.1 2872303 D 402881 CDS YP_001413938.1 154253114 5454478 complement(2874059..2874880) 1 NC_009719.1 KEGG: hypothetical protein; hypothetical protein 2874880 5454478 Plav_2673 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413938.1 2874059 R 402881 CDS YP_001413939.1 154253115 5455268 2874996..2875580 1 NC_009719.1 PFAM: nitroreductase; KEGG: mmr:Mmar10_1061 nitroreductase; nitroreductase 2875580 5455268 Plav_2674 Parvibaculum lavamentivorans DS-1 nitroreductase YP_001413939.1 2874996 D 402881 CDS YP_001413940.1 154253116 5455250 complement(2875584..2875871) 1 NC_009719.1 hypothetical protein 2875871 5455250 Plav_2675 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413940.1 2875584 R 402881 CDS YP_001413941.1 154253117 5454125 2875958..2876686 1 NC_009719.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sme:SMc00893 putative phosphoglycolate phosphatase; HAD family hydrolase 2876686 5454125 Plav_2676 Parvibaculum lavamentivorans DS-1 HAD family hydrolase YP_001413941.1 2875958 D 402881 CDS YP_001413942.1 154253118 5455193 complement(2876683..2877492) 1 NC_009719.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: rpa:RPA0441 hypothetical protein; phytanoyl-CoA dioxygenase 2877492 5455193 Plav_2677 Parvibaculum lavamentivorans DS-1 phytanoyl-CoA dioxygenase YP_001413942.1 2876683 R 402881 CDS YP_001413943.1 154253119 5454690 complement(2877544..2878986) 1 NC_009719.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: swi:Swit_1062 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2878986 5454690 Plav_2678 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413943.1 2877544 R 402881 CDS YP_001413944.1 154253120 5453698 2879139..2880470 1 NC_009719.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: ret:RHE_CH02716 chromate transporter protein; chromate transporter 2880470 5453698 Plav_2679 Parvibaculum lavamentivorans DS-1 chromate transporter YP_001413944.1 2879139 D 402881 CDS YP_001413945.1 154253121 5454100 complement(2880578..2882317) 1 NC_009719.1 PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: reu:Reut_B5252 hypothetical protein; amidohydrolase 3 2882317 5454100 Plav_2680 Parvibaculum lavamentivorans DS-1 amidohydrolase 3 YP_001413945.1 2880578 R 402881 CDS YP_001413946.1 154253122 5453510 complement(2882420..2883340) 1 NC_009719.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rpa:RPA3271 putative D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 2883340 5453510 Plav_2681 Parvibaculum lavamentivorans DS-1 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_001413946.1 2882420 R 402881 CDS YP_001413947.1 154253123 5453606 complement(2883348..2884199) 1 NC_009719.1 PFAM: HpcH/HpaI aldolase; KEGG: mlo:mlr0906 citrate lyase beta chain; citrate (pro-3S)-lyase 2884199 5453606 Plav_2682 Parvibaculum lavamentivorans DS-1 citrate (pro-3S)-lyase YP_001413947.1 2883348 R 402881 CDS YP_001413948.1 154253124 5454604 complement(2884203..2884667) 1 NC_009719.1 PFAM: MaoC domain protein dehydratase; KEGG: mlo:mlr0905 probable monoamine oxidase regulatory protein; dehydratase 2884667 5454604 Plav_2683 Parvibaculum lavamentivorans DS-1 dehydratase YP_001413948.1 2884203 R 402881 CDS YP_001413949.1 154253125 5456968 2884766..2885935 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: aav:Aave_0176 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 2885935 5456968 Plav_2684 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001413949.1 2884766 D 402881 CDS YP_001413950.1 154253126 5456346 2885944..2886351 1 NC_009719.1 PFAM: histidine triad (HIT) protein; KEGG: hch:HCH_04937 diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; histidine triad (HIT) protein 2886351 5456346 Plav_2685 Parvibaculum lavamentivorans DS-1 histidine triad (HIT) protein YP_001413950.1 2885944 D 402881 CDS YP_001413951.1 154253127 5453398 2886444..2886905 1 NC_009719.1 PFAM: response regulator receiver; KEGG: eli:ELI_04825 chemotaxis protein CheYIV; response regulator receiver protein 2886905 5453398 Plav_2686 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001413951.1 2886444 D 402881 CDS YP_001413952.1 154253128 5453774 complement(2887049..2888467) 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: pae:PA4654 probable major facilitator superfamily (MFS) transporter; major facilitator superfamily transporter 2888467 5453774 Plav_2687 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001413952.1 2887049 R 402881 CDS YP_001413953.1 154253129 5454295 2888639..2889637 1 NC_009719.1 KEGG: rpb:RPB_2186 hypothetical protein; hypothetical protein 2889637 5454295 Plav_2688 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413953.1 2888639 D 402881 CDS YP_001413954.1 154253130 5454798 complement(2889932..2890369) 1 NC_009719.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: bsu:BG13011 similar to hypothetical proteins; BadM/Rrf2 family transcriptional regulator 2890369 5454798 Plav_2689 Parvibaculum lavamentivorans DS-1 BadM/Rrf2 family transcriptional regulator YP_001413954.1 2889932 R 402881 CDS YP_001413955.1 154253131 5454846 2890482..2890949 1 NC_009719.1 PFAM: globin; KEGG: swi:Swit_5297 sec-independent protein translocase protein TatC; globin 2890949 5454846 Plav_2690 Parvibaculum lavamentivorans DS-1 globin YP_001413955.1 2890482 D 402881 CDS YP_001413956.1 154253132 5453704 2891023..2893740 1 NC_009719.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rpd:RPD_1436 ATPase, E1-E2 type; HAD superfamily P-type ATPase 2893740 5453704 Plav_2691 Parvibaculum lavamentivorans DS-1 HAD superfamily P-type ATPase YP_001413956.1 2891023 D 402881 CDS YP_001413957.1 154253133 5453729 2893827..2897102 1 NC_009719.1 PFAM: carboxyl transferase; biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rpa:RPA1450 putative pyruvate carboxylase; carbamoyl-phosphate synthase L chain ATP-binding 2897102 5453729 Plav_2692 Parvibaculum lavamentivorans DS-1 carbamoyl-phosphate synthase L chain ATP-binding YP_001413957.1 2893827 D 402881 CDS YP_001413958.1 154253134 5453539 complement(2897106..2898197) 1 NC_009719.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: nar:Saro_3603 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 2898197 5453539 Plav_2693 Parvibaculum lavamentivorans DS-1 NADH:flavin oxidoreductase YP_001413958.1 2897106 R 402881 CDS YP_001413959.1 154253135 5453621 complement(2898286..2899152) 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: abo:ABO_2425 glutathione S-transferase; glutathione S-transferase domain-containing protein 2899152 5453621 Plav_2694 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001413959.1 2898286 R 402881 CDS YP_001413960.1 154253136 5454347 complement(2899195..2900391) 1 NC_009719.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: hne:HNE_1823 E-cinnamoyl-CoA:R-phenyllactate CoA transferase, large subunit; L-carnitine dehydratase/bile acid-inducible protein F 2900391 5454347 Plav_2695 Parvibaculum lavamentivorans DS-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001413960.1 2899195 R 402881 CDS YP_001413961.1 154253137 5454250 2900548..2900961 1 NC_009719.1 PFAM: DoxX family protein; KEGG: bxe:Bxe_A1140 hypothetical protein; DoxX family protein 2900961 5454250 Plav_2696 Parvibaculum lavamentivorans DS-1 DoxX family protein YP_001413961.1 2900548 D 402881 CDS YP_001413962.1 154253138 5453449 2901076..2902209 1 NC_009719.1 KEGG: hne:HNE_2068 hypothetical protein; hypothetical protein 2902209 5453449 Plav_2697 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413962.1 2901076 D 402881 CDS YP_001413963.1 154253139 5456574 2902292..2903506 1 NC_009719.1 TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; KEGG: rso:RSc2252 probable beta-ketoadipyl CoA thiolase protein; beta-ketoadipyl CoA thiolase 2903506 5456574 Plav_2698 Parvibaculum lavamentivorans DS-1 beta-ketoadipyl CoA thiolase YP_001413963.1 2902292 D 402881 CDS YP_001413964.1 154253140 5456696 complement(2903510..2904706) 1 NC_009719.1 PFAM: EAL domain protein; KEGG: mpt:Mpe_A0214 signal transduction protein; diguanylate phosphodiesterase 2904706 5456696 Plav_2699 Parvibaculum lavamentivorans DS-1 diguanylate phosphodiesterase YP_001413964.1 2903510 R 402881 CDS YP_001413965.1 154253141 5456624 2904855..2905676 1 NC_009719.1 PFAM: NUDIX hydrolase; KEGG: bbt:BBta_5001 hypothetical protein; NUDIX hydrolase 2905676 5456624 Plav_2700 Parvibaculum lavamentivorans DS-1 NUDIX hydrolase YP_001413965.1 2904855 D 402881 CDS YP_001413966.1 154253142 5456914 complement(2905911..2906678) 1 NC_009719.1 PFAM: ATP-NAD/AcoX kinase; KEGG: mag:amb0162 predicted sugar kinase; NAD(+) kinase 2906678 5456914 Plav_2701 Parvibaculum lavamentivorans DS-1 NAD(+) kinase YP_001413966.1 2905911 R 402881 CDS YP_001413967.1 154253143 5453773 2906755..2907096 1 NC_009719.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: swi:Swit_1359 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein 2907096 5453773 Plav_2702 Parvibaculum lavamentivorans DS-1 CutA1 divalent ion tolerance protein YP_001413967.1 2906755 D 402881 CDS YP_001413968.1 154253144 5454141 complement(2907093..2908130) 1 NC_009719.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bms:BR0958 molybdenum cofactor biosynthesis protein A; molybdenum cofactor biosynthesis protein A 2908130 5454141 Plav_2703 Parvibaculum lavamentivorans DS-1 molybdenum cofactor biosynthesis protein A YP_001413968.1 2907093 R 402881 CDS YP_001413969.1 154253145 5456098 2908241..2909734 1 NC_009719.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: pde:Pden_4386 glycerol kinase; glycerol kinase 2909734 5456098 Plav_2704 Parvibaculum lavamentivorans DS-1 glycerol kinase YP_001413969.1 2908241 D 402881 CDS YP_001413970.1 154253146 5453543 2909887..2911296 1 NC_009719.1 PFAM: FAD linked oxidase domain protein; KEGG: rpc:RPC_2091 FAD linked oxidase-like; FAD linked oxidase domain-containing protein 2911296 5453543 Plav_2705 Parvibaculum lavamentivorans DS-1 FAD linked oxidase domain-containing protein YP_001413970.1 2909887 D 402881 CDS YP_001413971.1 154253147 5454325 2911326..2911601 1 NC_009719.1 hypothetical protein 2911601 5454325 Plav_2706 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413971.1 2911326 D 402881 CDS YP_001413972.1 154253148 5453930 2911689..2912465 1 NC_009719.1 PFAM: class II aldolase/adducin family protein; KEGG: hne:HNE_2063 aldolase, class II; class II aldolase/adducin family protein 2912465 5453930 Plav_2707 Parvibaculum lavamentivorans DS-1 class II aldolase/adducin family protein YP_001413972.1 2911689 D 402881 CDS YP_001413973.1 154253149 5453620 2912560..2914899 1 NC_009719.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: acr:Acry_1968 carbon-monoxide dehydrogenase (acceptor); molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase 2914899 5453620 Plav_2708 Parvibaculum lavamentivorans DS-1 molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase YP_001413973.1 2912560 D 402881 CDS YP_001413974.1 154253150 5453558 2915007..2915711 1 NC_009719.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hne:HNE_1702 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 2915711 5453558 Plav_2709 Parvibaculum lavamentivorans DS-1 helix-turn-helix domain-containing protein YP_001413974.1 2915007 D 402881 CDS YP_001413975.1 154253151 5453920 complement(2915715..2916374) 1 NC_009719.1 PFAM: putative RNA methylase; UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: sal:Sala_2559 methyltransferase type 11; type 11 methyltransferase 2916374 5453920 Plav_2710 Parvibaculum lavamentivorans DS-1 type 11 methyltransferase YP_001413975.1 2915715 R 402881 CDS YP_001413976.1 154253152 5453708 2916492..2917934 1 NC_009719.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0428 major facilitator superfamily (MFS) sugar transporter; major facilitator superfamily transporter 2917934 5453708 Plav_2711 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001413976.1 2916492 D 402881 CDS YP_001413977.1 154253153 5454973 2918010..2918693 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: bha:BH0580 transcriptional regulator (TetR/AcrR family); TetR family transcriptional regulator 2918693 5454973 Plav_2712 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001413977.1 2918010 D 402881 CDS YP_001413978.1 154253154 5453985 2918738..2919772 1 NC_009719.1 hypothetical protein 2919772 5453985 Plav_2713 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413978.1 2918738 D 402881 CDS YP_001413979.1 154253155 5454705 2919769..2920653 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pat:Patl_2956 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2920653 5454705 Plav_2714 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001413979.1 2919769 D 402881 CDS YP_001413980.1 154253156 5455055 2920780..2921220 1 NC_009719.1 hypothetical protein 2921220 5455055 Plav_2715 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413980.1 2920780 D 402881 CDS YP_001413981.1 154253157 5455062 complement(2921280..2921837) 1 NC_009719.1 KEGG: rpa:RPA3309 hypothetical protein; hypothetical protein 2921837 5455062 Plav_2716 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413981.1 2921280 R 402881 CDS YP_001413982.1 154253158 5454206 complement(2921927..2923294) 1 NC_009719.1 PFAM: glutamine synthetase catalytic region; KEGG: pau:PA14_72850 putative glutamine synthetase; glutamine synthetase 2923294 5454206 Plav_2717 Parvibaculum lavamentivorans DS-1 glutamine synthetase YP_001413982.1 2921927 R 402881 CDS YP_001413983.1 154253159 5454996 complement(2923291..2924664) 1 NC_009719.1 PFAM: aminotransferase class-III; KEGG: glutamate-1-semialdehyde 2,1-aminomutase; aminotransferase 2924664 5454996 Plav_2718 Parvibaculum lavamentivorans DS-1 aminotransferase YP_001413983.1 2923291 R 402881 CDS YP_001413984.1 154253160 5454985 2924829..2925251 1 NC_009719.1 hypothetical protein 2925251 5454985 Plav_2719 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413984.1 2924829 D 402881 CDS YP_001413985.1 154253161 5453570 2925797..2926882 1 NC_009719.1 KEGG: rpc:RPC_3111 hypothetical protein; hypothetical protein 2926882 5453570 Plav_2720 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001413985.1 2925797 D 402881 CDS YP_001413986.1 154253162 5456371 complement(2926879..2927745) 1 NC_009719.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: mag:amb3149 rRNA methylase; RNA methyltransferase 2927745 5456371 Plav_2721 Parvibaculum lavamentivorans DS-1 RNA methyltransferase YP_001413986.1 2926879 R 402881 CDS YP_001413987.1 154253163 5453640 2928299..2929489 1 NC_009719.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 2929489 5453640 Plav_2722 Parvibaculum lavamentivorans DS-1 elongation factor Tu YP_001413987.1 2928299 D 402881 CDS YP_001413988.1 154253164 5453884 2929701..2929901 1 NC_009719.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: bov:BOV_1211 preprotein translocase, SecE subunit; preprotein translocase subunit SecE 2929901 5453884 Plav_2723 Parvibaculum lavamentivorans DS-1 preprotein translocase subunit SecE YP_001413988.1 2929701 D 402881 CDS YP_001413989.1 154253165 5454342 2929936..2930466 1 NC_009719.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides Ouzounis Woese) domain protein; KEGG: rpd:RPD_3202 transcription termination/antitermination factor NusG; NusG antitermination factor 2930466 5454342 Plav_2724 Parvibaculum lavamentivorans DS-1 NusG antitermination factor YP_001413989.1 2929936 D 402881 CDS YP_001413990.1 154253166 5454735 2930570..2930998 1 NC_009719.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 2930998 rplK 5454735 rplK Parvibaculum lavamentivorans DS-1 50S ribosomal protein L11 YP_001413990.1 2930570 D 402881 CDS YP_001413991.1 154253167 5455382 2931004..2931705 1 NC_009719.1 PFAM: ribosomal protein L1; KEGG: mes:Meso_1822 ribosomal protein L1; 50S ribosomal protein L1 2931705 5455382 Plav_2726 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L1 YP_001413991.1 2931004 D 402881 CDS YP_001413992.1 154253168 5455887 2932083..2932601 1 NC_009719.1 PFAM: ribosomal protein L10; KEGG: bov:BOV_1207 ribosomal protein L10; 50S ribosomal protein L10 2932601 5455887 Plav_2727 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L10 YP_001413992.1 2932083 D 402881 CDS YP_001413993.1 154253169 5454980 2932650..2933021 1 NC_009719.1 TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; KEGG: mes:Meso_1820 ribosomal protein L7/L12; 50S ribosomal protein L7/L12 2933021 5454980 Plav_2728 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L7/L12 YP_001413993.1 2932650 D 402881 CDS YP_001413994.1 154253170 5456710 2933201..2937289 1 NC_009719.1 TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 7; RNA polymerase Rpb2 domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 3; KEGG: bbt:BBta_5081 RNA polymerase, beta subunit; DNA-directed RNA polymerase subunit beta 2937289 5456710 Plav_2729 Parvibaculum lavamentivorans DS-1 DNA-directed RNA polymerase subunit beta YP_001413994.1 2933201 D 402881 CDS YP_001413995.1 154253171 5456286 2937459..2941652 1 NC_009719.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 2941652 5456286 Plav_2730 Parvibaculum lavamentivorans DS-1 DNA-directed RNA polymerase subunit beta' YP_001413995.1 2937459 D 402881 CDS YP_001413996.1 154253172 5456251 2942394..2942765 1 NC_009719.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 2942765 rpsL 5456251 rpsL Parvibaculum lavamentivorans DS-1 30S ribosomal protein S12 YP_001413996.1 2942394 D 402881 CDS YP_001413997.1 154253173 5453550 2942777..2943247 1 NC_009719.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 2943247 5453550 Plav_2732 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S7 YP_001413997.1 2942777 D 402881 CDS YP_001413998.1 154253174 5456795 2943278..2945353 1 NC_009719.1 TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: rru:Rru_A2691 translation elongation factor G; translation elongation factor G 2945353 5456795 Plav_2733 Parvibaculum lavamentivorans DS-1 translation elongation factor G YP_001413998.1 2943278 D 402881 CDS YP_001413999.1 154253175 5456799 2945395..2946585 1 NC_009719.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 2946585 5456799 Plav_2734 Parvibaculum lavamentivorans DS-1 elongation factor Tu YP_001413999.1 2945395 D 402881 CDS YP_001414000.1 154253176 5453789 2946669..2946977 1 NC_009719.1 PFAM: ribosomal protein S10; KEGG: mmr:Mmar10_1796 ribosomal protein S10; 30S ribosomal protein S10 2946977 5453789 Plav_2735 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S10 YP_001414000.1 2946669 D 402881 CDS YP_001414001.1 154253177 5454013 2947017..2947772 1 NC_009719.1 PFAM: ribosomal protein L3; KEGG: rde:RD1_1399 ribosomal protein L3; 50S ribosomal protein L3 2947772 5454013 Plav_2736 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L3 YP_001414001.1 2947017 D 402881 CDS YP_001414002.1 154253178 5454054 2947772..2948392 1 NC_009719.1 PFAM: ribosomal protein L4/L1e; KEGG: nwi:Nwi_1365 50S ribosomal protein L4; 50S ribosomal protein L4 2948392 5454054 Plav_2737 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L4 YP_001414002.1 2947772 D 402881 CDS YP_001414003.1 154253179 5453946 2948389..2948679 1 NC_009719.1 PFAM: Ribosomal protein L25/L23; KEGG: rpd:RPD_3182 ribosomal protein L25/L23; 50S ribosomal protein L25 2948679 5453946 Plav_2738 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L25 YP_001414003.1 2948389 D 402881 CDS YP_001414004.1 154253180 5455098 2948684..2949520 1 NC_009719.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 2949520 rplB 5455098 rplB Parvibaculum lavamentivorans DS-1 50S ribosomal protein L2 YP_001414004.1 2948684 D 402881 CDS YP_001414005.1 154253181 5454762 2949531..2949809 1 NC_009719.1 TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: rle:RL1778 putative 30S ribosomal protein S19; 30S ribosomal protein S19 2949809 5454762 Plav_2740 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S19 YP_001414005.1 2949531 D 402881 CDS YP_001414006.1 154253182 5454224 2949813..2950193 1 NC_009719.1 TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: mes:Meso_1673 ribosomal protein L22; 50S ribosomal protein L22 2950193 5454224 Plav_2741 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L22 YP_001414006.1 2949813 D 402881 CDS YP_001414007.1 154253183 5454717 2950193..2950903 1 NC_009719.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein; KEGG: mes:Meso_1672 ribosomal protein S3; 30S ribosomal protein S3 2950903 5454717 Plav_2742 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S3 YP_001414007.1 2950193 D 402881 CDS YP_001414008.1 154253184 5454268 2950937..2951356 1 NC_009719.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 2951356 rplP 5454268 rplP Parvibaculum lavamentivorans DS-1 50S ribosomal protein L16 YP_001414008.1 2950937 D 402881 CDS YP_001414009.1 154253185 5455205 2951403..2951609 1 NC_009719.1 PFAM: ribosomal protein L29; KEGG: rle:RL1782 putative 50S ribosomal protein L29; 50S ribosomal protein L29 2951609 5455205 Plav_2744 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L29 YP_001414009.1 2951403 D 402881 CDS YP_001414010.1 154253186 5454171 2951620..2951856 1 NC_009719.1 PFAM: ribosomal protein S17; KEGG: atu:Atu1937 30S ribosomal protein S17; 30S ribosomal protein S17 2951856 5454171 Plav_2745 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S17 YP_001414010.1 2951620 D 402881 CDS YP_001414011.1 154253187 5455693 2951903..2952271 1 NC_009719.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 2952271 rplN 5455693 rplN Parvibaculum lavamentivorans DS-1 50S ribosomal protein L14 YP_001414011.1 2951903 D 402881 CDS YP_001414012.1 154253188 5456789 2952271..2952588 1 NC_009719.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; SMART: KOW (Kyrpides Ouzounis Woese) domain protein; KEGG: rru:Rru_A2677 ribosomal protein L24; 50S ribosomal protein L24 2952588 5456789 Plav_2747 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L24 YP_001414012.1 2952271 D 402881 CDS YP_001414013.1 154253189 5455928 2952581..2953138 1 NC_009719.1 PFAM: ribosomal protein L5; KEGG: bhe:BH10390 50S ribosomal protein L5; 50S ribosomal protein L5 2953138 5455928 Plav_2748 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L5 YP_001414013.1 2952581 D 402881 CDS YP_001414014.1 154253190 5457036 2953181..2953486 1 NC_009719.1 PFAM: ribosomal protein S14; KEGG: hne:HNE_2838 ribosomal protein S14; 30S ribosomal protein S14 2953486 5457036 Plav_2749 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S14 YP_001414014.1 2953181 D 402881 CDS YP_001414015.1 154253191 5456114 2953498..2953896 1 NC_009719.1 PFAM: ribosomal protein S8; KEGG: bqu:BQ08090 30S ribosomal protein S8; 30S ribosomal protein S8 2953896 5456114 Plav_2750 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S8 YP_001414015.1 2953498 D 402881 CDS YP_001414016.1 154253192 5456192 2953942..2954475 1 NC_009719.1 PFAM: ribosomal protein L6; KEGG: mes:Meso_1663 ribosomal protein L6; 50S ribosomal protein L6 2954475 5456192 Plav_2751 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L6 YP_001414016.1 2953942 D 402881 CDS YP_001414017.1 154253193 5456787 2954486..2954842 1 NC_009719.1 TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: mes:Meso_1662 ribosomal protein L18; 50S ribosomal protein L18 2954842 5456787 Plav_2752 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L18 YP_001414017.1 2954486 D 402881 CDS YP_001414018.1 154253194 5456639 2954855..2955415 1 NC_009719.1 TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5; KEGG: nwi:Nwi_1381 30S ribosomal protein S5; 30S ribosomal protein S5 2955415 5456639 Plav_2753 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S5 YP_001414018.1 2954855 D 402881 CDS YP_001414019.1 154253195 5453807 2955440..2955646 1 NC_009719.1 PFAM: ribosomal protein L30; KEGG: sme:SMc01291 50S ribosomal protein L30; 50S ribosomal protein L30 2955646 5453807 Plav_2754 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L30 YP_001414019.1 2955440 D 402881 CDS YP_001414020.1 154253196 5454775 2955682..2956164 1 NC_009719.1 PFAM: ribosomal protein L15; KEGG: swi:Swit_1334 ribosomal protein L15; 50S ribosomal protein L15 2956164 5454775 Plav_2755 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L15 YP_001414020.1 2955682 D 402881 CDS YP_001414021.1 154253197 5453371 2956222..2957553 1 NC_009719.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: rpa:RPA3230 secretion protein SecY; preprotein translocase subunit SecY 2957553 5453371 Plav_2756 Parvibaculum lavamentivorans DS-1 preprotein translocase subunit SecY YP_001414021.1 2956222 D 402881 CDS YP_001414022.1 154253198 5456295 2957550..2958167 1 NC_009719.1 PFAM: adenylate kinase; KEGG: rpd:RPD_3163 adenylate kinases; adenylate kinase 2958167 5456295 Plav_2757 Parvibaculum lavamentivorans DS-1 adenylate kinase YP_001414022.1 2957550 D 402881 CDS YP_001414023.1 154253199 5456436 2958317..2958685 1 NC_009719.1 PFAM: ribosomal protein S13; KEGG: atc:AGR_C_3520 30S ribosomal protein S13; 30S ribosomal protein S13 2958685 5456436 Plav_2758 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S13 YP_001414023.1 2958317 D 402881 CDS YP_001414024.1 154253200 5453806 2958752..2959141 1 NC_009719.1 PFAM: ribosomal protein S11; KEGG: mmr:Mmar10_1772 ribosomal protein S11; 30S ribosomal protein S11 2959141 5453806 Plav_2759 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S11 YP_001414024.1 2958752 D 402881 CDS YP_001414025.1 154253201 5456892 2959238..2960311 1 NC_009719.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 2960311 5456892 Plav_2760 Parvibaculum lavamentivorans DS-1 DNA-directed RNA polymerase subunit alpha YP_001414025.1 2959238 D 402881 CDS YP_001414026.1 154253202 5453892 2960421..2960840 1 NC_009719.1 PFAM: ribosomal protein L17; KEGG: 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17; 50S ribosomal protein L17 2960840 5453892 Plav_2761 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L17 YP_001414026.1 2960421 D 402881 CDS YP_001414027.1 154253203 5453665 2961039..2962496 1 NC_009719.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mag:amb3481 trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain; protease Do 2962496 5453665 Plav_2762 Parvibaculum lavamentivorans DS-1 protease Do YP_001414027.1 2961039 D 402881 CDS YP_001414028.1 154253204 5454042 complement(2962693..2963175) 1 NC_009719.1 TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: mmr:Mmar10_0048 bacterioferritin; bacterioferritin 2963175 5454042 Plav_2763 Parvibaculum lavamentivorans DS-1 bacterioferritin YP_001414028.1 2962693 R 402881 CDS YP_001414029.1 154253205 5454009 complement(2963301..2963507) 1 NC_009719.1 hypothetical protein 2963507 5454009 Plav_2764 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414029.1 2963301 R 402881 CDS YP_001414030.1 154253206 5453420 2963687..2964991 1 NC_009719.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rru:Rru_A2660 AAA ATPase, central region; recombination factor protein RarA 2964991 5453420 Plav_2765 Parvibaculum lavamentivorans DS-1 recombination factor protein RarA YP_001414030.1 2963687 D 402881 CDS YP_001414031.1 154253207 5454821 2964988..2965371 1 NC_009719.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: mlo:mlr0333 crcB protein; CrcB protein 2965371 5454821 Plav_2766 Parvibaculum lavamentivorans DS-1 CrcB protein YP_001414031.1 2964988 D 402881 CDS YP_001414032.1 154253208 5453864 2965368..2966360 1 NC_009719.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rru:Rru_A2659 pseudouridine synthase, RluD; RluA family pseudouridine synthase 2966360 5453864 Plav_2767 Parvibaculum lavamentivorans DS-1 RluA family pseudouridine synthase YP_001414032.1 2965368 D 402881 CDS YP_001414033.1 154253209 5455362 2966360..2967073 1 NC_009719.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rde:RD1_1442 hydrolase, putative; HAD family hydrolase 2967073 5455362 Plav_2768 Parvibaculum lavamentivorans DS-1 HAD family hydrolase YP_001414033.1 2966360 D 402881 CDS YP_001414034.1 154253210 5454890 2967077..2968840 1 NC_009719.1 PFAM: AsmA family protein; KEGG: pnu:Pnuc_0711 AsmA family protein; AsmA family protein 2968840 5454890 Plav_2769 Parvibaculum lavamentivorans DS-1 AsmA family protein YP_001414034.1 2967077 D 402881 CDS YP_001414035.1 154253211 5453460 2968864..2969679 1 NC_009719.1 PFAM: ATP12 ATPase; KEGG: rsp:RSP_1746 hypothetical protein; ATP12 ATPase 2969679 5453460 Plav_2770 Parvibaculum lavamentivorans DS-1 ATP12 ATPase YP_001414035.1 2968864 D 402881 CDS YP_001414036.1 154253212 5456141 2969903..2971435 1 NC_009719.1 PFAM: carboxyl transferase; KEGG: mlo:mll0348 propionyl-CoA carboxylase; carboxyl transferase 2971435 5456141 Plav_2771 Parvibaculum lavamentivorans DS-1 carboxyl transferase YP_001414036.1 2969903 D 402881 CDS YP_001414037.1 154253213 5455771 2971447..2973462 1 NC_009719.1 PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: mlo:mll0871 propionyl-CoA carboxylase alpha chain precursor; carbamoyl-phosphate synthase L chain ATP-binding 2973462 5455771 Plav_2772 Parvibaculum lavamentivorans DS-1 carbamoyl-phosphate synthase L chain ATP-binding YP_001414037.1 2971447 D 402881 CDS YP_001414038.1 154253214 5455552 2973742..2974779 1 NC_009719.1 KEGG: mba:Mbar_A3298 hypothetical protein; hypothetical protein 2974779 5455552 Plav_2773 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414038.1 2973742 D 402881 CDS YP_001414039.1 154253215 5455851 complement(2975143..2975820) 1 NC_009719.1 TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: bja:blr5257 lipoate biosynthesis protein B; lipoate-protein ligase B 2975820 5455851 Plav_2774 Parvibaculum lavamentivorans DS-1 lipoate-protein ligase B YP_001414039.1 2975143 R 402881 CDS YP_001414040.1 154253216 5455605 2975885..2976121 1 NC_009719.1 PFAM: surface presentation of antigens (SPOA) protein; KEGG: mmr:Mmar10_1744 surface presentation of antigens (SpoA) protein; surface presentation of antigens (SPOA) protein 2976121 5455605 Plav_2775 Parvibaculum lavamentivorans DS-1 surface presentation of antigens (SPOA) protein YP_001414040.1 2975885 D 402881 CDS YP_001414041.1 154253217 5456879 2976301..2976861 1 NC_009719.1 TIGRFAM: siroheme synthase; KEGG: acr:Acry_2803 siroheme synthase; siroheme synthase 2976861 5456879 Plav_2776 Parvibaculum lavamentivorans DS-1 siroheme synthase YP_001414041.1 2976301 D 402881 CDS YP_001414042.1 154253218 5455442 2976924..2977682 1 NC_009719.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 2977682 5455442 Plav_2777 Parvibaculum lavamentivorans DS-1 phosphoadenosine phosphosulfate reductase YP_001414042.1 2976924 D 402881 CDS YP_001414043.1 154253219 5454771 2978004..2979389 1 NC_009719.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: rle:RL2551 putative transmembrane cationic transporter; magnesium transporter 2979389 5454771 Plav_2778 Parvibaculum lavamentivorans DS-1 magnesium transporter YP_001414043.1 2978004 D 402881 CDS YP_001414044.1 154253220 5455533 2979417..2980421 1 NC_009719.1 PFAM: Kelch repeat-containing protein; Kelch repeat protein; KEGG: mmr:Mmar10_1741 Kelch repeat protein; kelch repeat-containing protein 2980421 5455533 Plav_2779 Parvibaculum lavamentivorans DS-1 kelch repeat-containing protein YP_001414044.1 2979417 D 402881 CDS YP_001414045.1 154253221 5456010 2980506..2981678 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bbt:BBta_6658 isovaleryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 2981678 5456010 Plav_2780 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001414045.1 2980506 D 402881 CDS YP_001414046.1 154253222 5453478 2981678..2982757 1 NC_009719.1 KEGG: eli:ELI_09820 hypothetical protein; hypothetical protein 2982757 5453478 Plav_2781 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414046.1 2981678 D 402881 CDS YP_001414047.1 154253223 5455136 complement(2983376..2984260) 1 NC_009719.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: mem:Memar_0499 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 2984260 5455136 Plav_2782 Parvibaculum lavamentivorans DS-1 PA-phosphatase-like phosphoesterase YP_001414047.1 2983376 R 402881 CDS YP_001414048.1 154253224 5454682 2984356..2985555 1 NC_009719.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: azo:azo0393 probable acyl-CoA thiolase; acetyl-CoA acetyltransferase 2985555 5454682 Plav_2783 Parvibaculum lavamentivorans DS-1 acetyl-CoA acetyltransferase YP_001414048.1 2984356 D 402881 CDS YP_001414049.1 154253225 5456154 complement(2985552..2985947) 1 NC_009719.1 KEGG: mmr:Mmar10_1416 hypothetical protein; hypothetical protein 2985947 5456154 Plav_2784 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414049.1 2985552 R 402881 CDS YP_001414050.1 154253226 5453528 complement(2985964..2986554) 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: bra:BRADO3678 putative transcriptional regulatory protein, TetR family; TetR family transcriptional regulator 2986554 5453528 Plav_2785 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001414050.1 2985964 R 402881 CDS YP_001414051.1 154253227 5454173 2986633..2988249 1 NC_009719.1 PFAM: carboxyl transferase; KEGG: mmr:Mmar10_1734 propionyl-CoA carboxylase; propionyl-CoA carboxylase 2988249 5454173 Plav_2786 Parvibaculum lavamentivorans DS-1 propionyl-CoA carboxylase YP_001414051.1 2986633 D 402881 CDS YP_001414052.1 154253228 5453726 2988257..2989063 1 NC_009719.1 hypothetical protein 2989063 5453726 Plav_2787 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414052.1 2988257 D 402881 CDS YP_001414053.1 154253229 5456198 2989066..2991087 1 NC_009719.1 PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: gme:Gmet_3292 biotin/lipoyl attachment:carbamoyl-phosphate synthase L chain, ATP-binding:carbamoyl-phosphate synthetase large chain-like:biotin carboxylase-like; carbamoyl-phosphate synthase L chain ATP-binding 2991087 5456198 Plav_2788 Parvibaculum lavamentivorans DS-1 carbamoyl-phosphate synthase L chain ATP-binding YP_001414053.1 2989066 D 402881 CDS YP_001414054.1 154253230 5456104 2991084..2991518 1 NC_009719.1 PFAM: conserved hypothetical protein; KEGG: mes:Meso_1368 uncharacterised conserved protein UCP032025; hypothetical protein 2991518 5456104 Plav_2789 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414054.1 2991084 D 402881 CDS YP_001414055.1 154253231 5455497 2991590..2992483 1 NC_009719.1 PFAM: peptidase S15; KEGG: mpt:Mpe_A2886 hypothetical protein; peptidase S15 2992483 5455497 Plav_2790 Parvibaculum lavamentivorans DS-1 peptidase S15 YP_001414055.1 2991590 D 402881 CDS YP_001414056.1 154253232 5453634 complement(2992492..2993358) 1 NC_009719.1 TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain; PFAM: Pantoate-beta-alanine ligase; KEGG: rru:Rru_A3320 cytidyltransferase-related; pantoate--beta-alanine ligase 2993358 5453634 Plav_2791 Parvibaculum lavamentivorans DS-1 pantoate--beta-alanine ligase YP_001414056.1 2992492 R 402881 CDS YP_001414057.1 154253233 5453422 complement(2993757..2994935) 1 NC_009719.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: hch:HCH_06318 alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 2994935 5453422 Plav_2792 Parvibaculum lavamentivorans DS-1 iron-containing alcohol dehydrogenase YP_001414057.1 2993757 R 402881 CDS YP_001414058.1 154253234 5453743 complement(2994932..2996326) 1 NC_009719.1 PFAM: aldehyde dehydrogenase; KEGG: acr:Acry_2389 aldehyde dehydrogenase; aldehyde dehydrogenase 2996326 5453743 Plav_2793 Parvibaculum lavamentivorans DS-1 aldehyde dehydrogenase YP_001414058.1 2994932 R 402881 CDS YP_001414059.1 154253235 5454797 complement(2996323..2997690) 1 NC_009719.1 PFAM: glutamine synthetase catalytic region; KEGG: mlo:mll3074 glutamine synthetase; glutamate--ammonia ligase 2997690 5454797 Plav_2794 Parvibaculum lavamentivorans DS-1 glutamate--ammonia ligase YP_001414059.1 2996323 R 402881 CDS YP_001414060.1 154253236 5455052 2997911..2998765 1 NC_009719.1 PFAM: ATPase MipZ; KEGG: rsp:RSP_1042 chromosome partitioning protein; ATPase MipZ 2998765 5455052 Plav_2795 Parvibaculum lavamentivorans DS-1 ATPase MipZ YP_001414060.1 2997911 D 402881 CDS YP_001414061.1 154253237 5454326 complement(2998762..3000438) 1 NC_009719.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; KEGG: atc:AGR_C_2773 penicillin-binding protein dacf precursor (dacF); serine-type D-Ala-D-Ala carboxypeptidase 3000438 5454326 Plav_2796 Parvibaculum lavamentivorans DS-1 serine-type D-Ala-D-Ala carboxypeptidase YP_001414061.1 2998762 R 402881 CDS YP_001414062.1 154253238 5453682 3000982..3001314 1 NC_009719.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 3001314 clpS 5453682 clpS Parvibaculum lavamentivorans DS-1 ATP-dependent Clp protease adaptor protein ClpS YP_001414062.1 3000982 D 402881 CDS YP_001414063.1 154253239 5456202 3001363..3003747 1 NC_009719.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: bra:BRADO4545 ATP-dependent specificity subunit of ClpA-ClpP serine protease; ATP-dependent Clp protease ATP-binding protein ClpA 3003747 5456202 Plav_2798 Parvibaculum lavamentivorans DS-1 ATP-dependent Clp protease ATP-binding protein ClpA YP_001414063.1 3001363 D 402881 CDS YP_001414064.1 154253240 5454339 3003857..3004222 1 NC_009719.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nar:Saro_0439 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3004222 5454339 Plav_2799 Parvibaculum lavamentivorans DS-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001414064.1 3003857 D 402881 CDS YP_001414065.1 154253241 5454852 complement(3004302..3005918) 1 NC_009719.1 PFAM: NHL repeat containing protein; KEGG: rpa:RPA4432 NHL repeat; NHL repeat-containing protein 3005918 5454852 Plav_2800 Parvibaculum lavamentivorans DS-1 NHL repeat-containing protein YP_001414065.1 3004302 R 402881 CDS YP_001414066.1 154253242 5455541 complement(3005943..3006362) 1 NC_009719.1 PFAM: histidine triad (HIT) protein; KEGG: atc:AGR_C_2530 probable hit family protein; histidine triad (HIT) protein 3006362 5455541 Plav_2801 Parvibaculum lavamentivorans DS-1 histidine triad (HIT) protein YP_001414066.1 3005943 R 402881 CDS YP_001414067.1 154253243 5453473 complement(3006365..3007561) 1 NC_009719.1 PFAM: protein of unknown function DUF482; KEGG: sme:SMc02105 hypothetical protein; hypothetical protein 3007561 5453473 Plav_2802 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414067.1 3006365 R 402881 CDS YP_001414068.1 154253244 5454769 complement(3007589..3008056) 1 NC_009719.1 PFAM: Endoribonuclease L-PSP; KEGG: rsq:Rsph17025_0250 endoribonuclease L-PSP; endoribonuclease L-PSP 3008056 5454769 Plav_2803 Parvibaculum lavamentivorans DS-1 endoribonuclease L-PSP YP_001414068.1 3007589 R 402881 CDS YP_001414069.1 154253245 5454127 3008150..3009190 1 NC_009719.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: lpn:lpg0005 peptidylarginine deiminase; agmatine deiminase 3009190 5454127 Plav_2804 Parvibaculum lavamentivorans DS-1 agmatine deiminase YP_001414069.1 3008150 D 402881 CDS YP_001414070.1 154253246 5453863 complement(3009195..3009905) 1 NC_009719.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mxa:MXAN_5366 response regulator/GGDEF domain protein; diguanylate cyclase 3009905 5453863 Plav_2805 Parvibaculum lavamentivorans DS-1 diguanylate cyclase YP_001414070.1 3009195 R 402881 CDS YP_001414071.1 154253247 5454153 complement(3010100..3010978) 1 NC_009719.1 PFAM: protein of unknown function DUF323; KEGG: sde:Sde_3987 RecF protein; hypothetical protein 3010978 5454153 Plav_2806 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414071.1 3010100 R 402881 CDS YP_001414072.1 154253248 5454447 complement(3010975..3011940) 1 NC_009719.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rru:Rru_A1815 glycolate reductase; glyoxylate reductase 3011940 5454447 Plav_2807 Parvibaculum lavamentivorans DS-1 glyoxylate reductase YP_001414072.1 3010975 R 402881 CDS YP_001414073.1 154253249 5453603 3012027..3012848 1 NC_009719.1 PFAM: Domain of unknown function DUF1849; KEGG: sme:SMc02102 hypothetical protein; hypothetical protein 3012848 5453603 Plav_2808 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414073.1 3012027 D 402881 CDS YP_001414074.1 154253250 5455102 complement(3012985..3014256) 1 NC_009719.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 3014256 5455102 Plav_2809 Parvibaculum lavamentivorans DS-1 DNA polymerase IV YP_001414074.1 3012985 R 402881 CDS YP_001414075.1 154253251 5456440 3014404..3015327 1 NC_009719.1 hypothetical protein 3015327 5456440 Plav_2810 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414075.1 3014404 D 402881 CDS YP_001414076.1 154253252 5454417 complement(3015588..3016487) 1 NC_009719.1 PFAM: ROK family protein; KEGG: sfu:Sfum_0489 ROK family protein; ROK family protein 3016487 5454417 Plav_2811 Parvibaculum lavamentivorans DS-1 ROK family protein YP_001414076.1 3015588 R 402881 CDS YP_001414077.1 154253253 5456900 complement(3016897..3017655) 1 NC_009719.1 KEGG: mlo:mlr0864 hypothetical protein; hypothetical protein 3017655 5456900 Plav_2812 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414077.1 3016897 R 402881 CDS YP_001414078.1 154253254 5455015 complement(3017652..3017969) 1 NC_009719.1 KEGG: rsh:Rsph17029_2068 hypothetical protein; hypothetical protein 3017969 5455015 Plav_2813 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414078.1 3017652 R 402881 CDS YP_001414079.1 154253255 5456930 3018185..3018559 1 NC_009719.1 PFAM: response regulator receiver; KEGG: polar differentiation response regulator; response regulator receiver protein 3018559 5456930 Plav_2814 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001414079.1 3018185 D 402881 CDS YP_001414080.1 154253256 5453911 3018603..3019976 1 NC_009719.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: rpb:RPB_2413 diguanylate cyclase; response regulator receiver modulated diguanylate cyclase 3019976 5453911 Plav_2815 Parvibaculum lavamentivorans DS-1 response regulator receiver modulated diguanylate cyclase YP_001414080.1 3018603 D 402881 CDS YP_001414081.1 154253257 5456425 complement(3020445..3020612) 1 NC_009719.1 PFAM: ribosomal protein L33; KEGG: mmr:Mmar10_1278 ribosomal protein L33; 50S ribosomal protein L33 3020612 5456425 Plav_2816 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L33 YP_001414081.1 3020445 R 402881 CDS YP_001414082.1 154253258 5454829 complement(3020705..3021007) 1 NC_009719.1 KEGG: nar:Saro_0897 hypothetical protein; hypothetical protein 3021007 5454829 Plav_2817 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414082.1 3020705 R 402881 CDS YP_001414083.1 154253259 5454922 complement(3021184..3021864) 1 NC_009719.1 KEGG: nar:Saro_0897 hypothetical protein; hypothetical protein 3021864 5454922 Plav_2818 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414083.1 3021184 R 402881 CDS YP_001414084.1 154253260 5456866 complement(3022150..3023199) 1 NC_009719.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sth:STH2403 threonine aldolase; aromatic amino acid beta-eliminating lyase/threonine aldolase 3023199 5456866 Plav_2819 Parvibaculum lavamentivorans DS-1 aromatic amino acid beta-eliminating lyase/threonine aldolase YP_001414084.1 3022150 R 402881 CDS YP_001414085.1 154253261 5454913 3023254..3023937 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: hne:HNE_2415 transcriptional regulator, TetR family; TetR family transcriptional regulator 3023937 5454913 Plav_2820 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001414085.1 3023254 D 402881 CDS YP_001414086.1 154253262 5454822 complement(3025482..3025958) 1 NC_009719.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bbt:BBta_4128 putative transcriptional regulator, AsnC/Lrp family; AsnC family transcriptional regulator 3025958 5454822 Plav_2822 Parvibaculum lavamentivorans DS-1 AsnC family transcriptional regulator YP_001414086.1 3025482 R 402881 CDS YP_001414087.1 154253263 5453549 3026102..3026905 1 NC_009719.1 KEGG: rle:pRL120290 hypothetical protein; hypothetical protein 3026905 5453549 Plav_2823 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414087.1 3026102 D 402881 CDS YP_001414088.1 154253264 5454226 complement(3026920..3027570) 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: bja:blr6664 glutathione S-transferase; glutathione S-transferase domain-containing protein 3027570 5454226 Plav_2824 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001414088.1 3026920 R 402881 CDS YP_001414089.1 154253265 5454696 complement(3027615..3028856) 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc01368 putative transport transmembrane protein; major facilitator superfamily transporter 3028856 5454696 Plav_2825 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001414089.1 3027615 R 402881 CDS YP_001414090.1 154253266 5454192 complement(3029021..3029659) 1 NC_009719.1 hypothetical protein 3029659 5454192 Plav_2826 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414090.1 3029021 R 402881 CDS YP_001414091.1 154253267 5453820 complement(3029736..3030413) 1 NC_009719.1 PFAM: NUDIX hydrolase; KEGG: pat:Patl_2625 NUDIX hydrolase; NUDIX hydrolase 3030413 5453820 Plav_2827 Parvibaculum lavamentivorans DS-1 NUDIX hydrolase YP_001414091.1 3029736 R 402881 CDS YP_001414092.1 154253268 5454974 complement(3030418..3031185) 1 NC_009719.1 PFAM: NUDIX hydrolase; KEGG: pat:Patl_2625 NUDIX hydrolase; NUDIX hydrolase 3031185 5454974 Plav_2828 Parvibaculum lavamentivorans DS-1 NUDIX hydrolase YP_001414092.1 3030418 R 402881 CDS YP_001414093.1 154253269 5454412 complement(3031281..3031706) 1 NC_009719.1 PFAM: protein of unknown function DUF983; KEGG: mes:Meso_1352 protein of unknown function DUF983; hypothetical protein 3031706 5454412 Plav_2829 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414093.1 3031281 R 402881 CDS YP_001414094.1 154253270 5455562 complement(3031806..3034154) 1 NC_009719.1 TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; KEGG: bme:BMEII0665 ribonuclease R; ribonuclease R 3034154 5455562 Plav_2830 Parvibaculum lavamentivorans DS-1 ribonuclease R YP_001414094.1 3031806 R 402881 CDS YP_001414095.1 154253271 5454642 complement(3034158..3036842) 1 NC_009719.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 3036842 5454642 Plav_2831 Parvibaculum lavamentivorans DS-1 DNA topoisomerase I YP_001414095.1 3034158 R 402881 CDS YP_001414096.1 154253272 5454998 3037187..3037471 1 NC_009719.1 hypothetical protein 3037471 5454998 Plav_2832 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414096.1 3037187 D 402881 CDS YP_001414097.1 154253273 5455763 complement(3037478..3038596) 1 NC_009719.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: mag:amb0681 predicted Rossmann fold nucleotide-binding protein; DNA protecting protein DprA 3038596 5455763 Plav_2833 Parvibaculum lavamentivorans DS-1 DNA protecting protein DprA YP_001414097.1 3037478 R 402881 CDS YP_001414098.1 154253274 5455813 complement(3038603..3039247) 1 NC_009719.1 PFAM: protein of unknown function DUF205; KEGG: rpa:RPA3119 hypothetical protein; hypothetical protein 3039247 5455813 Plav_2834 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414098.1 3038603 R 402881 CDS YP_001414099.1 154253275 5455492 complement(3039273..3040574) 1 NC_009719.1 TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: rpa:RPA3118 dihydroorotase; multifunctional complex type dihydroorotase 3040574 5455492 Plav_2835 Parvibaculum lavamentivorans DS-1 multifunctional complex type dihydroorotase YP_001414099.1 3039273 R 402881 CDS YP_001414100.1 154253276 5455931 complement(3040571..3041635) 1 NC_009719.1 TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: bra:BRADO4502 aspartate carbamoyltransferase (catalytic subunit); aspartate carbamoyltransferase 3041635 5455931 Plav_2836 Parvibaculum lavamentivorans DS-1 aspartate carbamoyltransferase YP_001414100.1 3040571 R 402881 CDS YP_001414101.1 154253277 5455522 3041667..3043358 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ilo:IL1542 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 3043358 5455522 Plav_2837 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001414101.1 3041667 D 402881 CDS YP_001414102.1 154253278 5455476 3043362..3044204 1 NC_009719.1 KEGG: syx:SynWH7803_0896 hypothetical protein; hypothetical protein 3044204 5455476 Plav_2838 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414102.1 3043362 D 402881 CDS YP_001414103.1 154253279 5456876 complement(3044242..3045270) 1 NC_009719.1 KEGG: pna:Pnap_2858 insertion element protein; insertion element protein 3045270 5456876 Plav_2839 Parvibaculum lavamentivorans DS-1 insertion element protein YP_001414103.1 3044242 R 402881 CDS YP_001414104.1 154253280 5453944 complement(3045372..3046286) 1 NC_009719.1 PFAM: Auxin Efflux Carrier; KEGG: rpe:RPE_3369 auxin efflux carrier; auxin efflux carrier 3046286 5453944 Plav_2840 Parvibaculum lavamentivorans DS-1 auxin efflux carrier YP_001414104.1 3045372 R 402881 CDS YP_001414105.1 154253281 5455491 complement(3046311..3046859) 1 NC_009719.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: mag:amb1588 putative Holliday junction resolvase; Holliday junction resolvase YqgF 3046859 5455491 Plav_2841 Parvibaculum lavamentivorans DS-1 Holliday junction resolvase YqgF YP_001414105.1 3046311 R 402881 CDS YP_001414106.1 154253282 5455520 3046903..3047277 1 NC_009719.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: hne:HNE_2299 glutamyl-tRNA(Gln) amidotransferase, C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C 3047277 5455520 Plav_2842 Parvibaculum lavamentivorans DS-1 glutamyl-tRNA(Gln) amidotransferase subunit C YP_001414106.1 3046903 D 402881 CDS YP_001414107.1 154253283 5454258 3047281..3048759 1 NC_009719.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; KEGG: bme:BMEII0675 glutamyl-tRNA(gln) amidotransferase subunit A; glutamyl-tRNA(Gln) amidotransferase subunit A 3048759 5454258 Plav_2843 Parvibaculum lavamentivorans DS-1 glutamyl-tRNA(Gln) amidotransferase subunit A YP_001414107.1 3047281 D 402881 CDS YP_001414108.1 154253284 5454472 3048756..3050273 1 NC_009719.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: mes:Meso_1720 glutamyl-tRNA(Gln) amidotransferase, B subunit; glutamyl-tRNA(Gln) amidotransferase subunit B 3050273 5454472 Plav_2844 Parvibaculum lavamentivorans DS-1 glutamyl-tRNA(Gln) amidotransferase subunit B YP_001414108.1 3048756 D 402881 CDS YP_001414109.1 154253285 5453533 3050493..3050969 1 NC_009719.1 KEGG: rme:Rmet_3071 putative histone H1 protein; putative histone H1 protein 3050969 5453533 Plav_2845 Parvibaculum lavamentivorans DS-1 putative histone H1 protein YP_001414109.1 3050493 D 402881 CDS YP_001414110.1 154253286 5454519 3050979..3051770 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: sme:SMc02390 putative glutathione S-transferase protein; glutathione S-transferase domain-containing protein 3051770 5454519 Plav_2846 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001414110.1 3050979 D 402881 CDS YP_001414111.1 154253287 5455639 3051882..3052223 1 NC_009719.1 hypothetical protein 3052223 5455639 Plav_2847 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414111.1 3051882 D 402881 CDS YP_001414112.1 154253288 5453580 3052279..3052980 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_A5556 glutathione S-transferase-like; glutathione S-transferase domain-containing protein 3052980 5453580 Plav_2848 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001414112.1 3052279 D 402881 CDS YP_001414113.1 154253289 5454324 3053157..3053426 1 NC_009719.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: eli:ELI_14115 hypothetical protein; Sel1 domain-containing protein 3053426 5454324 Plav_2849 Parvibaculum lavamentivorans DS-1 Sel1 domain-containing protein YP_001414113.1 3053157 D 402881 CDS YP_001414114.1 154253290 5455178 3053533..3054423 1 NC_009719.1 TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; KEGG: bme:BMEI0166 acyl-CoA thioesterase II; acyl-CoA thioesterase II 3054423 5455178 Plav_2850 Parvibaculum lavamentivorans DS-1 acyl-CoA thioesterase II YP_001414114.1 3053533 D 402881 CDS YP_001414115.1 154253291 5454774 3054621..3055235 1 NC_009719.1 PFAM: regulatory protein TetR; Resolvase helix-turn-helix domain protein; KEGG: msm:MSMEG_1500 TetR family protein transcriptional regulatory protein; TetR family transcriptional regulator 3055235 5454774 Plav_2851 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001414115.1 3054621 D 402881 CDS YP_001414116.1 154253292 5454409 3055291..3056184 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: mkm:Mkms_3008 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3056184 5454409 Plav_2852 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001414116.1 3055291 D 402881 CDS YP_001414117.1 154253293 5454209 complement(3056207..3057664) 1 NC_009719.1 KEGG: eli:ELI_05180 sugar transporter; sugar transporter 3057664 5454209 Plav_2853 Parvibaculum lavamentivorans DS-1 sugar transporter YP_001414117.1 3056207 R 402881 CDS YP_001414118.1 154253294 5456973 3057810..3058439 1 NC_009719.1 PFAM: protein of unknown function UPF0126; KEGG: pca:Pcar_0604 hypothetical protein; hypothetical protein 3058439 5456973 Plav_2854 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414118.1 3057810 D 402881 CDS YP_001414119.1 154253295 5455070 3058659..3059783 1 NC_009719.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bra:BRADO5370 conserved hypothetical protein; putative membrane protein; putative small-conductance mechanosensitive channel; mechanosensitive ion channel protein MscS 3059783 5455070 Plav_2855 Parvibaculum lavamentivorans DS-1 mechanosensitive ion channel protein MscS YP_001414119.1 3058659 D 402881 CDS YP_001414120.1 154253296 5456867 3060131..3060940 1 NC_009719.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: hha:Hhal_1678 methyltransferase type 12; type 12 methyltransferase 3060940 5456867 Plav_2856 Parvibaculum lavamentivorans DS-1 type 12 methyltransferase YP_001414120.1 3060131 D 402881 CDS YP_001414121.1 154253297 5453775 3060927..3061766 1 NC_009719.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: hha:Hhal_1677 methyltransferase type 11; type 11 methyltransferase 3061766 5453775 Plav_2857 Parvibaculum lavamentivorans DS-1 type 11 methyltransferase YP_001414121.1 3060927 D 402881 CDS YP_001414122.1 154253298 5454978 3062004..3062714 1 NC_009719.1 KEGG: sde:Sde_3519 hypothetical protein; hypothetical protein 3062714 5454978 Plav_2858 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414122.1 3062004 D 402881 CDS YP_001414123.1 154253299 5455019 3062775..3064439 1 NC_009719.1 PFAM: Na+/Picotransporter; KEGG: hne:HNE_1902 Na/Pi cotransporter family protein; Na+/H+ antiporter 3064439 5455019 Plav_2859 Parvibaculum lavamentivorans DS-1 Na+/H+ antiporter YP_001414123.1 3062775 D 402881 CDS YP_001414124.1 154253300 5453941 complement(3064441..3065313) 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; KEGG: hypothetical protein; alpha/beta hydrolase fold protein 3065313 5453941 Plav_2860 Parvibaculum lavamentivorans DS-1 alpha/beta hydrolase fold protein YP_001414124.1 3064441 R 402881 CDS YP_001414125.1 154253301 5455979 complement(3065392..3067806) 1 NC_009719.1 PFAM: Lytic transglycosylase catalytic; KEGG: mmr:Mmar10_1584 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 3067806 5455979 Plav_2861 Parvibaculum lavamentivorans DS-1 lytic transglycosylase catalytic subunit YP_001414125.1 3065392 R 402881 CDS YP_001414126.1 154253302 5453919 3067978..3068853 1 NC_009719.1 TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: bja:bll5072 dihydrodipicolinate synthase; dihydrodipicolinate synthase 3068853 5453919 Plav_2862 Parvibaculum lavamentivorans DS-1 dihydrodipicolinate synthase YP_001414126.1 3067978 D 402881 CDS YP_001414127.1 154253303 5453518 3068880..3069377 1 NC_009719.1 TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: rpc:RPC_2631 SsrA-binding protein; SsrA-binding protein 3069377 5453518 Plav_2863 Parvibaculum lavamentivorans DS-1 SsrA-binding protein YP_001414127.1 3068880 D 402881 CDS YP_001414128.1 154253304 5454379 complement(3069374..3070045) 1 NC_009719.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: bja:blr5068 hypothetical protein; uracil-DNA glycosylase superfamily protein 3070045 5454379 Plav_2864 Parvibaculum lavamentivorans DS-1 uracil-DNA glycosylase superfamily protein YP_001414128.1 3069374 R 402881 CDS YP_001414129.1 154253305 5454084 complement(3070057..3070677) 1 NC_009719.1 PFAM: protein of unknown function DUF88; KEGG: rru:Rru_A1859 protein of unknown function DUF88; hypothetical protein 3070677 5454084 Plav_2865 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414129.1 3070057 R 402881 CDS YP_001414130.1 154253306 5454958 3070814..3071377 1 NC_009719.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: rru:Rru_A1858 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HppK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3071377 5454958 Plav_2866 Parvibaculum lavamentivorans DS-1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001414130.1 3070814 D 402881 CDS YP_001414131.1 154253307 5453356 3071481..3071906 1 NC_009719.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; KEGG: rpe:RPE_3027 DNA-directed RNA polymerase, omega subunit; DNA-directed RNA polymerase subunit omega 3071906 5453356 Plav_2867 Parvibaculum lavamentivorans DS-1 DNA-directed RNA polymerase subunit omega YP_001414131.1 3071481 D 402881 CDS YP_001414132.1 154253308 5454628 3072054..3074213 1 NC_009719.1 KEGG: mag:amb2253 guanosine polyphosphate pyrophosphohydrolase/synthetase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA 3074213 5454628 Plav_2868 Parvibaculum lavamentivorans DS-1 (p)ppGpp synthetase I SpoT/RelA YP_001414132.1 3072054 D 402881 CDS YP_001414133.1 154253309 5455981 3074249..3074833 1 NC_009719.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 3074833 pyrE 5455981 pyrE Parvibaculum lavamentivorans DS-1 orotate phosphoribosyltransferase YP_001414133.1 3074249 D 402881 CDS YP_001414134.1 154253310 5454389 3074846..3075472 1 NC_009719.1 KEGG: mes:Meso_0947 hypothetical protein; hypothetical protein 3075472 5454389 Plav_2870 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414134.1 3074846 D 402881 CDS YP_001414135.1 154253311 5453484 3075469..3076266 1 NC_009719.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 3076266 5453484 Plav_2871 Parvibaculum lavamentivorans DS-1 pyridoxine 5'-phosphate synthase YP_001414135.1 3075469 D 402881 CDS YP_001414136.1 154253312 5454208 3076263..3076664 1 NC_009719.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: sme:SMc02654 probable holo-acyl-carrier protein synthase; holo-(acyl-carrier-protein) synthase 3076664 5454208 Plav_2872 Parvibaculum lavamentivorans DS-1 holo-(acyl-carrier-protein) synthase YP_001414136.1 3076263 D 402881 CDS YP_001414137.1 154253313 5455034 3076730..3077509 1 NC_009719.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24 S26A and S26B; KEGG: nha:Nham_2252 peptidase S26A, signal peptidase I; signal peptidase I 3077509 5455034 Plav_2873 Parvibaculum lavamentivorans DS-1 signal peptidase I YP_001414137.1 3076730 D 402881 CDS YP_001414138.1 154253314 5454828 3077497..3078177 1 NC_009719.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: rru:Rru_A1852 ribonuclease III; ribonuclease III 3078177 5454828 Plav_2874 Parvibaculum lavamentivorans DS-1 ribonuclease III YP_001414138.1 3077497 D 402881 CDS YP_001414139.1 154253315 5454414 3078218..3079174 1 NC_009719.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: sme:SMc02651 probable GTP-binding protein; GTP-binding protein Era 3079174 5454414 Plav_2875 Parvibaculum lavamentivorans DS-1 GTP-binding protein Era YP_001414139.1 3078218 D 402881 CDS YP_001414140.1 154253316 5453780 3079286..3079990 1 NC_009719.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: mmr:Mmar10_1568 DNA repair protein RecO; DNA repair protein RecO 3079990 5453780 Plav_2876 Parvibaculum lavamentivorans DS-1 DNA repair protein RecO YP_001414140.1 3079286 D 402881 CDS YP_001414141.1 154253317 5454083 3080176..3082422 1 NC_009719.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 3082422 5454083 Plav_2877 Parvibaculum lavamentivorans DS-1 DNA topoisomerase IV subunit A YP_001414141.1 3080176 D 402881 CDS YP_001414142.1 154253318 5453439 3082582..3082869 1 NC_009719.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: rpe:RPE_1698 excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C 3082869 5453439 Plav_2878 Parvibaculum lavamentivorans DS-1 excinuclease ABC subunit C YP_001414142.1 3082582 D 402881 CDS YP_001414143.1 154253319 5454518 complement(3082952..3083443) 1 NC_009719.1 hypothetical protein 3083443 5454518 Plav_2879 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414143.1 3082952 R 402881 CDS YP_001414144.1 154253320 5454632 complement(3083449..3085023) 1 NC_009719.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: mmr:Mmar10_1562 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 3085023 5454632 Plav_2880 Parvibaculum lavamentivorans DS-1 TRAP dicarboxylate transporter subunit DctM YP_001414144.1 3083449 R 402881 CDS YP_001414145.1 154253321 5454953 complement(3085034..3085573) 1 NC_009719.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: mgm:Mmc1_1612 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 3085573 5454953 Plav_2881 Parvibaculum lavamentivorans DS-1 tripartite ATP-independent periplasmic transporter DctQ YP_001414145.1 3085034 R 402881 CDS YP_001414146.1 154253322 5453444 complement(3085588..3086661) 1 NC_009719.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: hne:HNE_0892 bacterial extracellular solute-binding protein, family 7; TRAP C4-dicarboxylate transport system permease subunit DctP 3086661 5453444 Plav_2882 Parvibaculum lavamentivorans DS-1 TRAP C4-dicarboxylate transport system permease subunit DctP YP_001414146.1 3085588 R 402881 CDS YP_001414147.1 154253323 5453991 complement(3086780..3087505) 1 NC_009719.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 3087505 5453991 Plav_2883 Parvibaculum lavamentivorans DS-1 arginyl-tRNA-protein transferase YP_001414147.1 3086780 R 402881 CDS YP_001414148.1 154253324 5454307 complement(3087538..3089397) 1 NC_009719.1 PFAM: Citrate transporter; TrkA-C domain protein; KEGG: mmr:Mmar10_1558 TrkA-C domain protein; TrkA domain-containing protein 3089397 5454307 Plav_2884 Parvibaculum lavamentivorans DS-1 TrkA domain-containing protein YP_001414148.1 3087538 R 402881 CDS YP_001414149.1 154253325 5455778 complement(3089496..3090023) 1 NC_009719.1 PFAM: RDD domain containing protein; KEGG: nwi:Nwi_1910 hypothetical protein; RDD domain-containing protein 3090023 5455778 Plav_2885 Parvibaculum lavamentivorans DS-1 RDD domain-containing protein YP_001414149.1 3089496 R 402881 CDS YP_001414150.1 154253326 5453355 complement(3090055..3090951) 1 NC_009719.1 PFAM: OmpA/MotB domain protein; KEGG: chemotaxis MotB protein; K02557 chemotaxis MotB protein; OmpA/MotB domain-containing protein 3090951 5453355 Plav_2886 Parvibaculum lavamentivorans DS-1 OmpA/MotB domain-containing protein YP_001414150.1 3090055 R 402881 CDS YP_001414151.1 154253327 5454960 complement(3090967..3091905) 1 NC_009719.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: rru:Rru_A1842 MotA, chemotaxis (motility protein A; MotA/TolQ/ExbB proton channel 3091905 5454960 Plav_2887 Parvibaculum lavamentivorans DS-1 MotA/TolQ/ExbB proton channel YP_001414151.1 3090967 R 402881 CDS YP_001414152.1 154253328 5454861 3092104..3092622 1 NC_009719.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: pen:PSEEN3104 P-hydroxyphenylacetate hydroxylase C1:reductase component; flavin reductase domain-containing protein 3092622 5454861 Plav_2888 Parvibaculum lavamentivorans DS-1 flavin reductase domain-containing protein YP_001414152.1 3092104 D 402881 CDS YP_001414153.1 154253329 5455075 complement(3092629..3093132) 1 NC_009719.1 PFAM: regulatory protein MarR; KEGG: mlo:mlr8230 transcriptional regulator; MarR family transcriptional regulator 3093132 5455075 Plav_2889 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001414153.1 3092629 R 402881 CDS YP_001414154.1 154253330 5454830 3093386..3094159 1 NC_009719.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: aeh:Mlg_1848 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 3094159 5454830 Plav_2890 Parvibaculum lavamentivorans DS-1 MotA/TolQ/ExbB proton channel YP_001414154.1 3093386 D 402881 CDS YP_001414155.1 154253331 5454405 3094181..3094588 1 NC_009719.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: hha:Hhal_0453 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 3094588 5454405 Plav_2891 Parvibaculum lavamentivorans DS-1 biopolymer transport protein ExbD/TolR YP_001414155.1 3094181 D 402881 CDS YP_001414156.1 154253332 5453376 3094585..3094989 1 NC_009719.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: hha:Hhal_0452 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 3094989 5453376 Plav_2892 Parvibaculum lavamentivorans DS-1 biopolymer transport protein ExbD/TolR YP_001414156.1 3094585 D 402881 CDS YP_001414157.1 154253333 5455313 3094986..3095840 1 NC_009719.1 KEGG: rso:RSc1963 probable tonb transmembrane protein; hypothetical protein 3095840 5455313 Plav_2893 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414157.1 3094986 D 402881 CDS YP_001414158.1 154253334 5456703 3095961..3096830 1 NC_009719.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rpa:RPA1973 3-hydroxyisobutyrate dehydrogenase; 6-phosphogluconate dehydrogenase 3096830 5456703 Plav_2894 Parvibaculum lavamentivorans DS-1 6-phosphogluconate dehydrogenase YP_001414158.1 3095961 D 402881 CDS YP_001414159.1 154253335 5456599 3096827..3097975 1 NC_009719.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mag:amb1101 diaminopimelate decarboxylase; Orn/DAP/Arg decarboxylase 2 3097975 5456599 Plav_2895 Parvibaculum lavamentivorans DS-1 Orn/DAP/Arg decarboxylase 2 YP_001414159.1 3096827 D 402881 CDS YP_001414160.1 154253336 5457006 3098084..3098536 1 NC_009719.1 PFAM: regulatory protein TetR; KEGG: sco:SCO4898 TetR-family transcriptional regulator; TetR family transcriptional regulator 3098536 5457006 Plav_2896 Parvibaculum lavamentivorans DS-1 TetR family transcriptional regulator YP_001414160.1 3098084 D 402881 CDS YP_001414161.1 154253337 5456600 complement(3098526..3099533) 1 NC_009719.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 3099533 5456600 Plav_2897 Parvibaculum lavamentivorans DS-1 delta-aminolevulinic acid dehydratase YP_001414161.1 3098526 R 402881 CDS YP_001414162.1 154253338 5456465 3099701..3100840 1 NC_009719.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rpb:RPB_2120 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 3100840 5456465 Plav_2898 Parvibaculum lavamentivorans DS-1 acyl-CoA dehydrogenase domain-containing protein YP_001414162.1 3099701 D 402881 CDS YP_001414163.1 154253339 5455384 3100842..3101882 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: xtr:548942 hypothetical protein LOC548942 Pfam: ECH; enoyl-CoA hydratase/isomerase 3101882 5455384 Plav_2899 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001414163.1 3100842 D 402881 CDS YP_001414164.1 154253340 5455259 3101902..3102792 1 NC_009719.1 TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mag:amb3587 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; 3-hydroxyisobutyrate dehydrogenase 3102792 5455259 Plav_2900 Parvibaculum lavamentivorans DS-1 3-hydroxyisobutyrate dehydrogenase YP_001414164.1 3101902 D 402881 CDS YP_001414165.1 154253341 5454349 3102931..3103443 1 NC_009719.1 PFAM: regulatory protein MarR; KEGG: bbt:BBta_4653 putative transcriptional regulatory protein, MarR family; MarR family transcriptional regulator 3103443 5454349 Plav_2901 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001414165.1 3102931 D 402881 CDS YP_001414166.1 154253342 5453667 complement(3103465..3104259) 1 NC_009719.1 PFAM: protein of unknown function DUF1295; KEGG: sal:Sala_1034 protein of unknown function DUF1295; hypothetical protein 3104259 5453667 Plav_2902 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414166.1 3103465 R 402881 CDS YP_001414167.1 154253343 5453593 3104534..3105733 1 NC_009719.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mes:Meso_1133 twin-arginine translocation pathway signal; peptidoglycan-binding domain-containing protein 3105733 5453593 Plav_2903 Parvibaculum lavamentivorans DS-1 peptidoglycan-binding domain-containing protein YP_001414167.1 3104534 D 402881 CDS YP_001414168.1 154253344 5454018 3105766..3106542 1 NC_009719.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sco:SCO1419 putative phosphodiesterase; glycerophosphoryl diester phosphodiesterase 3106542 5454018 Plav_2904 Parvibaculum lavamentivorans DS-1 glycerophosphoryl diester phosphodiesterase YP_001414168.1 3105766 D 402881 CDS YP_001414169.1 154253345 5453489 3106676..3107902 1 NC_009719.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 3107902 5453489 Plav_2905 Parvibaculum lavamentivorans DS-1 5-aminolevulinate synthase YP_001414169.1 3106676 D 402881 CDS YP_001414170.1 154253346 5453559 3107892..3108188 1 NC_009719.1 KEGG: mag:amb2560 hypothetical protein; hypothetical protein 3108188 5453559 Plav_2906 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414170.1 3107892 D 402881 CDS YP_001414171.1 154253347 5454341 complement(3108206..3108712) 1 NC_009719.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mlo:mlr1025 transcriptional regulatory protein, nodulation competitiveness determinant; MucR family transcriptional regulator 3108712 5454341 Plav_2907 Parvibaculum lavamentivorans DS-1 MucR family transcriptional regulator YP_001414171.1 3108206 R 402881 CDS YP_001414172.1 154253348 5454492 3109174..3110490 1 NC_009719.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 3110490 glyA 5454492 glyA Parvibaculum lavamentivorans DS-1 serine hydroxymethyltransferase YP_001414172.1 3109174 D 402881 CDS YP_001414173.1 154253349 5454498 3110537..3111025 1 NC_009719.1 PFAM: ATP-cone domain protein; KEGG: mlo:mlr8403 ATP-cone domain protein; ATP-cone domain-containing protein 3111025 5454498 Plav_2909 Parvibaculum lavamentivorans DS-1 ATP-cone domain-containing protein YP_001414173.1 3110537 D 402881 CDS YP_001414174.1 154253350 5455697 3111080..3112198 1 NC_009719.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: mag:amb2341 riboflavin biosynthesis protein RibD; riboflavin biosynthesis protein RibD 3112198 5455697 Plav_2910 Parvibaculum lavamentivorans DS-1 riboflavin biosynthesis protein RibD YP_001414174.1 3111080 D 402881 CDS YP_001414175.1 154253351 5455657 3112203..3112829 1 NC_009719.1 TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: jan:Jann_3417 riboflavin synthase, alpha subunit; riboflavin synthase subunit alpha 3112829 5455657 Plav_2911 Parvibaculum lavamentivorans DS-1 riboflavin synthase subunit alpha YP_001414175.1 3112203 D 402881 CDS YP_001414176.1 154253352 5456796 3112835..3113983 1 NC_009719.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: mmr:Mmar10_1533 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 3113983 5456796 Plav_2912 Parvibaculum lavamentivorans DS-1 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001414176.1 3112835 D 402881 CDS YP_001414177.1 154253353 5456711 3113980..3114435 1 NC_009719.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; KEGG: ret:RHE_CH01525 riboflavin synthase, beta chain protein; 6,7-dimethyl-8-ribityllumazine synthase 3114435 5456711 Plav_2913 Parvibaculum lavamentivorans DS-1 6,7-dimethyl-8-ribityllumazine synthase YP_001414177.1 3113980 D 402881 CDS YP_001414178.1 154253354 5456805 3114459..3114974 1 NC_009719.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: rpc:RPC_2664 NusB antitermination factor; NusB antitermination factor 3114974 5456805 Plav_2914 Parvibaculum lavamentivorans DS-1 NusB antitermination factor YP_001414178.1 3114459 D 402881 CDS YP_001414179.1 154253355 5456797 3114952..3115968 1 NC_009719.1 TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; KEGG: rpc:RPC_2665 thiamine-monophosphate kinase; thiamine-monophosphate kinase 3115968 5456797 Plav_2915 Parvibaculum lavamentivorans DS-1 thiamine-monophosphate kinase YP_001414179.1 3114952 D 402881 CDS YP_001414180.1 154253356 5456824 3116133..3118247 1 NC_009719.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 3118247 hppA 5456824 hppA Parvibaculum lavamentivorans DS-1 membrane-bound proton-translocating pyrophosphatase YP_001414180.1 3116133 D 402881 CDS YP_001414181.1 154253357 5456748 3118385..3120070 1 NC_009719.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: hch:HCH_06854 Kef-type K+ transport system, predicted NAD-binding component; sodium/hydrogen exchanger 3120070 5456748 Plav_2917 Parvibaculum lavamentivorans DS-1 sodium/hydrogen exchanger YP_001414181.1 3118385 D 402881 CDS YP_001414182.1 154253358 5455913 3120103..3120996 1 NC_009719.1 PFAM: UspA domain protein; KEGG: pau:PA14_56590 putative universal stress protein; UspA domain-containing protein 3120996 5455913 Plav_2918 Parvibaculum lavamentivorans DS-1 UspA domain-containing protein YP_001414182.1 3120103 D 402881 CDS YP_001414183.1 154253359 5456841 complement(3121049..3121552) 1 NC_009719.1 PFAM: SmpA/OmlA domain protein; KEGG: nwi:Nwi_1403 SmpA/OmlA; SmpA/OmlA domain-containing protein 3121552 5456841 Plav_2919 Parvibaculum lavamentivorans DS-1 SmpA/OmlA domain-containing protein YP_001414183.1 3121049 R 402881 CDS YP_001414184.1 154253360 5456825 3121672..3122253 1 NC_009719.1 PFAM: Ubiquinol-cytochrome C chaperone; KEGG: mag:amb2350 CBP3 protein, mitochondrial precursor; ubiquinol-cytochrome C chaperone 3122253 5456825 Plav_2920 Parvibaculum lavamentivorans DS-1 ubiquinol-cytochrome C chaperone YP_001414184.1 3121672 D 402881 CDS YP_001414185.1 154253361 5456755 3122250..3122807 1 NC_009719.1 KEGG: rru:Rru_A1664 conserved hypothetical cytosolic protein; hypothetical protein 3122807 5456755 Plav_2921 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414185.1 3122250 D 402881 CDS YP_001414186.1 154253362 5456832 3122919..3124004 1 NC_009719.1 TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: nha:Nham_1585 fatty acid/phospholipid synthesis protein PlsX; fatty acid/phospholipid synthesis protein PlsX 3124004 5456832 Plav_2922 Parvibaculum lavamentivorans DS-1 fatty acid/phospholipid synthesis protein PlsX YP_001414186.1 3122919 D 402881 CDS YP_001414187.1 154253363 5456994 3124001..3124978 1 NC_009719.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: nha:Nham_1586 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 3124978 5456994 Plav_2923 Parvibaculum lavamentivorans DS-1 3-oxoacyl-(acyl-carrier-protein) synthase III YP_001414187.1 3124001 D 402881 CDS YP_001414188.1 154253364 5456727 3125116..3125433 1 NC_009719.1 TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: rru:Rru_A1668 integration host factor, alpha subunit; integration host factor subunit alpha 3125433 5456727 Plav_2924 Parvibaculum lavamentivorans DS-1 integration host factor subunit alpha YP_001414188.1 3125116 D 402881 CDS YP_001414189.1 154253365 5455949 3125507..3125974 1 NC_009719.1 PFAM: regulatory protein MerR; KEGG: mes:Meso_1148 transcriptional regulator, MerR family; MerR family transcriptional regulator 3125974 5455949 Plav_2925 Parvibaculum lavamentivorans DS-1 MerR family transcriptional regulator YP_001414189.1 3125507 D 402881 CDS YP_001414190.1 154253366 5455938 complement(3126372..3126587) 1 NC_009719.1 KEGG: nha:Nham_2461 hypothetical protein; hypothetical protein 3126587 5455938 Plav_2926 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414190.1 3126372 R 402881 CDS YP_001414191.1 154253367 5455659 3126716..3127750 1 NC_009719.1 PFAM: cytochrome oxidase assembly; KEGG: neu:NE0431 cytochrome oxidase assembly; cytochrome oxidase assembly 3127750 5455659 Plav_2927 Parvibaculum lavamentivorans DS-1 cytochrome oxidase assembly YP_001414191.1 3126716 D 402881 CDS YP_001414192.1 154253368 5455875 3128152..3128796 1 NC_009719.1 KEGG: rrs:RoseRS_0296 hypothetical protein; hypothetical protein 3128796 5455875 Plav_2928 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414192.1 3128152 D 402881 CDS YP_001414193.1 154253369 5455629 3128796..3129833 1 NC_009719.1 PFAM: Appr-1-p processing domain protein; KEGG: aav:Aave_0161 Appr-1-p processing domain protein; appr-1-p processing domain-containing protein 3129833 5455629 Plav_2929 Parvibaculum lavamentivorans DS-1 appr-1-p processing domain-containing protein YP_001414193.1 3128796 D 402881 CDS YP_001414194.1 154253370 5455396 complement(3130120..3130773) 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: mxa:MXAN_4035 glutathione S-transferase family protein; glutathione S-transferase domain-containing protein 3130773 5455396 Plav_2930 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001414194.1 3130120 R 402881 CDS YP_001414195.1 154253371 5456747 complement(3130780..3131277) 1 NC_009719.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bja:bll5290 hypothetical protein; activator of Hsp90 ATPase 1 family protein 3131277 5456747 Plav_2931 Parvibaculum lavamentivorans DS-1 activator of Hsp90 ATPase 1 family protein YP_001414195.1 3130780 R 402881 CDS YP_001414196.1 154253372 5456630 complement(3131280..3131615) 1 NC_009719.1 PFAM: regulatory protein ArsR; KEGG: bja:bll5291 transcriptional regulatory protein; regulatory protein ArsR 3131615 5456630 Plav_2932 Parvibaculum lavamentivorans DS-1 regulatory protein ArsR YP_001414196.1 3131280 R 402881 CDS YP_001414197.1 154253373 5456542 complement(3132057..3133331) 1 NC_009719.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 3133331 5456542 Plav_2933 Parvibaculum lavamentivorans DS-1 O-acetylhomoserine aminocarboxypropyltransferase YP_001414197.1 3132057 R 402881 CDS YP_001414198.1 154253374 5456581 complement(3133532..3133951) 1 NC_009719.1 PFAM: CoA-binding domain protein; KEGG: swi:Swit_2358 CoA-binding domain protein; CoA-binding domain-containing protein 3133951 5456581 Plav_2934 Parvibaculum lavamentivorans DS-1 CoA-binding domain-containing protein YP_001414198.1 3133532 R 402881 CDS YP_001414199.1 154253375 5456175 complement(3133948..3134769) 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbt:BBta_4594 putative enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 3134769 5456175 Plav_2935 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001414199.1 3133948 R 402881 CDS YP_001414200.1 154253376 5456249 3134896..3135333 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: bov:BOV_0788 hypothetical protein; thioesterase superfamily protein 3135333 5456249 Plav_2936 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001414200.1 3134896 D 402881 CDS YP_001414201.1 154253377 5455926 3135530..3136093 1 NC_009719.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 3136093 rplM 5455926 rplM Parvibaculum lavamentivorans DS-1 50S ribosomal protein L13 YP_001414201.1 3135530 D 402881 CDS YP_001414202.1 154253378 5456028 3136096..3136584 1 NC_009719.1 PFAM: ribosomal protein S9; KEGG: mlo:mll8456 30S ribosomal protein S9; 30S ribosomal protein S9 3136584 5456028 Plav_2938 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S9 YP_001414202.1 3136096 D 402881 CDS YP_001414203.1 154253379 5456044 3136730..3137683 1 NC_009719.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 3137683 5456044 Plav_2939 Parvibaculum lavamentivorans DS-1 N-acetyl-gamma-glutamyl-phosphate reductase YP_001414203.1 3136730 D 402881 CDS YP_001414204.1 154253380 5456768 complement(3137847..3138689) 1 NC_009719.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rru:Rru_A3577 protein of unknown function DUF6, transmembrane; hypothetical protein 3138689 5456768 Plav_2940 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414204.1 3137847 R 402881 CDS YP_001414205.1 154253381 5456066 3138901..3139185 1 NC_009719.1 PFAM: plasmid maintenance system killer; KEGG: rpc:RPC_4369 plasmid maintenance system killer; plasmid maintenance system killer protein 3139185 5456066 Plav_2941 Parvibaculum lavamentivorans DS-1 plasmid maintenance system killer protein YP_001414205.1 3138901 D 402881 CDS YP_001414206.1 154253382 5456036 3139157..3139471 1 NC_009719.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: rpc:RPC_4370 plasmid maintenance system antidote protein, XRE family; XRE family plasmid maintenance system antidote protein 3139471 5456036 Plav_2942 Parvibaculum lavamentivorans DS-1 XRE family plasmid maintenance system antidote protein YP_001414206.1 3139157 D 402881 CDS YP_001414207.1 154253383 5455833 complement(3139547..3141541) 1 NC_009719.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: acr:Acry_1301 poly(R)-hydroxyalkanoic acid synthase, class I; poly(R)-hydroxyalkanoic acid synthase 3141541 5455833 Plav_2943 Parvibaculum lavamentivorans DS-1 poly(R)-hydroxyalkanoic acid synthase YP_001414207.1 3139547 R 402881 CDS YP_001414208.1 154253384 5456308 3141717..3142328 1 NC_009719.1 KEGG: cel:ZK84.1 ZK84.1; hypothetical protein 3142328 5456308 Plav_2944 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414208.1 3141717 D 402881 CDS YP_001414209.1 154253385 5456074 3142465..3143742 1 NC_009719.1 PFAM: aminotransferase class I and II; KEGG: sme:SMc00294 probable aminotransferase protein; class I/II aminotransferase 3143742 5456074 Plav_2945 Parvibaculum lavamentivorans DS-1 class I/II aminotransferase YP_001414209.1 3142465 D 402881 CDS YP_001414210.1 154253386 5456745 3143739..3145055 1 NC_009719.1 PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: gbe:GbCGDNIH1_1434 putative aminotransferase AatC; homoserine dehydrogenase 3145055 5456745 Plav_2946 Parvibaculum lavamentivorans DS-1 homoserine dehydrogenase YP_001414210.1 3143739 D 402881 CDS YP_001414211.1 154253387 5456489 3145082..3146056 1 NC_009719.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 3146056 glpX 5456489 glpX Parvibaculum lavamentivorans DS-1 fructose 1,6-bisphosphatase II YP_001414211.1 3145082 D 402881 CDS YP_001414212.1 154253388 5456719 3146084..3147895 1 NC_009719.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: mag:amb3730 single-stranded DNA-specific exonuclease; single-stranded-DNA-specific exonuclease RecJ 3147895 5456719 Plav_2948 Parvibaculum lavamentivorans DS-1 single-stranded-DNA-specific exonuclease RecJ YP_001414212.1 3146084 D 402881 CDS YP_001414213.1 154253389 5456709 3148335..3148718 1 NC_009719.1 hypothetical protein 3148718 5456709 Plav_2949 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414213.1 3148335 D 402881 CDS YP_001414214.1 154253390 5456340 complement(3148923..3149702) 1 NC_009719.1 KEGG: rpd:RPD_1872 sensor histidine kinase; hypothetical protein 3149702 5456340 Plav_2950 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414214.1 3148923 R 402881 CDS YP_001414215.1 154253391 5456691 complement(3149869..3150288) 1 NC_009719.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: hha:Hhal_0152 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3150288 5456691 Plav_2951 Parvibaculum lavamentivorans DS-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001414215.1 3149869 R 402881 CDS YP_001414216.1 154253392 5456725 3150305..3151099 1 NC_009719.1 PFAM: Silent information regulator protein Sir2; KEGG: bbt:BBta_4037 putative transciptional regulatory Sir2-family protein; silent information regulator protein Sir2 3151099 5456725 Plav_2952 Parvibaculum lavamentivorans DS-1 silent information regulator protein Sir2 YP_001414216.1 3150305 D 402881 CDS YP_001414217.1 154253393 5456717 complement(3151110..3151844) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dar:Daro_0087 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3151844 5456717 Plav_2953 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001414217.1 3151110 R 402881 CDS YP_001414218.1 154253394 5456733 3151901..3153550 1 NC_009719.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mlo:mlr7593 glycosyl hydrolase; alpha amylase 3153550 5456733 Plav_2954 Parvibaculum lavamentivorans DS-1 alpha amylase YP_001414218.1 3151901 D 402881 CDS YP_001414219.1 154253395 5456742 complement(3153553..3155172) 1 NC_009719.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; molybdopterin binding domain; KEGG: rpa:RPA3797 hypothetical protein; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 3155172 5456742 Plav_2955 Parvibaculum lavamentivorans DS-1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_001414219.1 3153553 R 402881 CDS YP_001414220.1 154253396 5456619 complement(3155169..3155846) 1 NC_009719.1 KEGG: rsq:Rsph17025_0331 protein of unknown function DUF182; hypothetical protein 3155846 5456619 Plav_2956 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414220.1 3155169 R 402881 CDS YP_001414221.1 154253397 5456667 complement(3155848..3156183) 1 NC_009719.1 PFAM: protein of unknown function DUF182; KEGG: rpe:RPE_1659 protein of unknown function DUF182; hypothetical protein 3156183 5456667 Plav_2957 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414221.1 3155848 R 402881 CDS YP_001414222.1 154253398 5456068 complement(3156180..3157391) 1 NC_009719.1 PFAM: VWA containing CoxE family protein; KEGG: mes:Meso_1291 VWA containing CoxE-like; VWA containing CoxE family protein 3157391 5456068 Plav_2958 Parvibaculum lavamentivorans DS-1 VWA containing CoxE family protein YP_001414222.1 3156180 R 402881 CDS YP_001414223.1 154253399 5456655 complement(3157391..3158302) 1 NC_009719.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rru:Rru_A0968 ATPase associated with various cellular activities, AAA_5; ATPase 3158302 5456655 Plav_2959 Parvibaculum lavamentivorans DS-1 ATPase YP_001414223.1 3157391 R 402881 CDS YP_001414224.1 154253400 5456631 complement(3158340..3159137) 1 NC_009719.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mlo:mll1127 carbon monoxide dehydrogenase chain C; molybdopterin dehydrogenase FAD-binding 3159137 5456631 Plav_2960 Parvibaculum lavamentivorans DS-1 molybdopterin dehydrogenase FAD-binding YP_001414224.1 3158340 R 402881 CDS YP_001414225.1 154253401 5456186 complement(3159149..3161530) 1 NC_009719.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mes:Meso_0059 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase 3161530 5456186 Plav_2961 Parvibaculum lavamentivorans DS-1 molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase YP_001414225.1 3159149 R 402881 CDS YP_001414226.1 154253402 5456662 complement(3161568..3162032) 1 NC_009719.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mes:Meso_0058 (2Fe-2S)-binding; 2Fe-2S iron-sulfur cluster-binding domain-containing protein 3162032 5456662 Plav_2962 Parvibaculum lavamentivorans DS-1 2Fe-2S iron-sulfur cluster-binding domain-containing protein YP_001414226.1 3161568 R 402881 CDS YP_001414227.1 154253403 5456607 complement(3162132..3162782) 1 NC_009719.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: acr:Acry_0470 carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G 3162782 5456607 Plav_2963 Parvibaculum lavamentivorans DS-1 carbon monoxide dehydrogenase subunit G YP_001414227.1 3162132 R 402881 CDS YP_001414228.1 154253404 5456200 complement(3162828..3164522) 1 NC_009719.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit D 3164522 5456200 Plav_2964 Parvibaculum lavamentivorans DS-1 putative monovalent cation/H+ antiporter subunit D YP_001414228.1 3162828 R 402881 CDS YP_001414229.1 154253405 5456403 complement(3164515..3164862) 1 NC_009719.1 hypothetical protein 3164862 5456403 Plav_2965 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414229.1 3164515 R 402881 CDS YP_001414230.1 154253406 5456594 complement(3164859..3166364) 1 NC_009719.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rba:RB1430 putative NADH-ubiquinone oxidoreductase subunit; NADH dehydrogenase (quinone) 3166364 5456594 Plav_2966 Parvibaculum lavamentivorans DS-1 NADH dehydrogenase (quinone) YP_001414230.1 3164859 R 402881 CDS YP_001414231.1 154253407 5456644 complement(3166375..3167880) 1 NC_009719.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 3167880 5456644 Plav_2967 Parvibaculum lavamentivorans DS-1 putative monovalent cation/H+ antiporter subunit D YP_001414231.1 3166375 R 402881 CDS YP_001414232.1 154253408 5455947 complement(3167880..3168299) 1 NC_009719.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: rru:Rru_A1636 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase chain 4L 3168299 5455947 Plav_2968 Parvibaculum lavamentivorans DS-1 NADH-ubiquinone oxidoreductase chain 4L YP_001414232.1 3167880 R 402881 CDS YP_001414233.1 154253409 5456984 complement(3168299..3168736) 1 NC_009719.1 PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: rru:Rru_A1637 Na+/H+ antiporter MnhB subunit-related protein; Na+/H+ antiporter MnhB subunit-like protein 3168736 5456984 Plav_2969 Parvibaculum lavamentivorans DS-1 Na+/H+ antiporter MnhB subunit-like protein YP_001414233.1 3168299 R 402881 CDS YP_001414234.1 154253410 5456954 complement(3168739..3169311) 1 NC_009719.1 KEGG: rru:Rru_A1638 putative multicomponent Na+-H+ antiporter subunit A; putative multicomponent Na+-H+ antiporter subunit A 3169311 5456954 Plav_2970 Parvibaculum lavamentivorans DS-1 putative multicomponent Na+-H+ antiporter subunit A YP_001414234.1 3168739 R 402881 CDS YP_001414235.1 154253411 5456585 complement(3169308..3169682) 1 NC_009719.1 TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: mmr:Mmar10_0886 monovalent cation/proton antiporter, MnhG/PhaG subunit; monovalent cation/proton antiporter subunit MnhG/PhaG 3169682 5456585 Plav_2971 Parvibaculum lavamentivorans DS-1 monovalent cation/proton antiporter subunit MnhG/PhaG YP_001414235.1 3169308 R 402881 CDS YP_001414236.1 154253412 5456650 complement(3169682..3169969) 1 NC_009719.1 PFAM: multiple resistance and pH regulation protein F; KEGG: rru:Rru_A1640 multiple resistance and pH regulation protein F; multiple resistance and pH regulation protein F 3169969 5456650 Plav_2972 Parvibaculum lavamentivorans DS-1 multiple resistance and pH regulation protein F YP_001414236.1 3169682 R 402881 CDS YP_001414237.1 154253413 5456564 complement(3169971..3170444) 1 NC_009719.1 PFAM: cation antiporter; KEGG: mmr:Mmar10_0884 cation antiporter; cation antiporter 3170444 5456564 Plav_2973 Parvibaculum lavamentivorans DS-1 cation antiporter YP_001414237.1 3169971 R 402881 CDS YP_001414238.1 154253414 5456596 3170737..3171336 1 NC_009719.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rpe:RPE_2918 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 3171336 5456596 Plav_2974 Parvibaculum lavamentivorans DS-1 cold-shock DNA-binding domain-containing protein YP_001414238.1 3170737 D 402881 CDS YP_001414239.1 154253415 5456231 3171394..3171855 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: hne:HNE_1964 thioesterase family protein; thioesterase superfamily protein 3171855 5456231 Plav_2975 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001414239.1 3171394 D 402881 CDS YP_001414240.1 154253416 5456570 3172153..3172809 1 NC_009719.1 PFAM: ETC complex I subunit conserved region; KEGG: NADH-ubiquinone oxidoreductase-related protein; ETC complex I subunit 3172809 5456570 Plav_2976 Parvibaculum lavamentivorans DS-1 ETC complex I subunit YP_001414240.1 3172153 D 402881 CDS YP_001414241.1 154253417 5455910 complement(3172901..3175438) 1 NC_009719.1 TIGRFAM: DNA ligase D; DNA ligase D 3'-phosphoesterase domain; DNA polymerase LigD polymerase domain; DNA polymerase LigD ligase region; PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: sme:SMc03959 hypothetical protein; DNA ligase D 3175438 5455910 Plav_2977 Parvibaculum lavamentivorans DS-1 DNA ligase D YP_001414241.1 3172901 R 402881 CDS YP_001414242.1 154253418 5456549 complement(3175445..3176368) 1 NC_009719.1 TIGRFAM: Ku family containing protein; PFAM: Ku domain protein; KEGG: swi:Swit_3981 Ku family containing protein; Ku domain-containing protein 3176368 5456549 Plav_2978 Parvibaculum lavamentivorans DS-1 Ku domain-containing protein YP_001414242.1 3175445 R 402881 CDS YP_001414243.1 154253419 5456385 3176470..3176892 1 NC_009719.1 PFAM: transport-associated; KEGG: sme:SMb20225 probable osmotically inducible sensory protein; transport-associated protein 3176892 5456385 Plav_2979 Parvibaculum lavamentivorans DS-1 transport-associated protein YP_001414243.1 3176470 D 402881 CDS YP_001414244.1 154253420 5456475 3177023..3177787 1 NC_009719.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: noc:Noc_2705 Sel1-like repeat protein; Sel1 domain-containing protein 3177787 5456475 Plav_2980 Parvibaculum lavamentivorans DS-1 Sel1 domain-containing protein YP_001414244.1 3177023 D 402881 CDS YP_001414245.1 154253421 5456540 3177869..3179191 1 NC_009719.1 TIGRFAM: FAD-linked oxidoreductase; PFAM: FAD linked oxidase domain protein; D-arabinono-14-lactone oxidase; KEGG: bur:Bcep18194_B3008 FAD-linked oxidoreductase; FAD-linked oxidoreductase 3179191 5456540 Plav_2981 Parvibaculum lavamentivorans DS-1 FAD-linked oxidoreductase YP_001414245.1 3177869 D 402881 CDS YP_001414246.1 154253422 5456535 complement(3179195..3179419) 1 NC_009719.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: sil:SPO2542 biotin/lipoate binding domain protein; biotin/lipoyl attachment domain-containing protein 3179419 5456535 Plav_2982 Parvibaculum lavamentivorans DS-1 biotin/lipoyl attachment domain-containing protein YP_001414246.1 3179195 R 402881 CDS YP_001414247.1 154253423 5456042 complement(3179477..3180634) 1 NC_009719.1 TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: mag:amb1294 cystathionine beta-lyase/cystathionine gamma-synthase; cystathionine beta-lyase 3180634 5456042 Plav_2983 Parvibaculum lavamentivorans DS-1 cystathionine beta-lyase YP_001414247.1 3179477 R 402881 CDS YP_001414248.1 154253424 5456437 3180834..3181937 1 NC_009719.1 SMART: extracellular solute-binding protein family 3; KEGG: bbt:BBta_3923 putative amino-acid ABC transporter, substrate-binding protein; extracellular solute-binding protein 3181937 5456437 Plav_2984 Parvibaculum lavamentivorans DS-1 extracellular solute-binding protein YP_001414248.1 3180834 D 402881 CDS YP_001414249.1 154253425 5456418 3181941..3183143 1 NC_009719.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A1003 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; polar amino acid ABC transporter inner membrane subunit 3183143 5456418 Plav_2985 Parvibaculum lavamentivorans DS-1 polar amino acid ABC transporter inner membrane subunit YP_001414249.1 3181941 D 402881 CDS YP_001414250.1 154253426 5456486 3183148..3184257 1 NC_009719.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pst:PSPTO_1257 amino acid ABC transporter, permease protein; polar amino acid ABC transporter inner membrane subunit 3184257 5456486 Plav_2986 Parvibaculum lavamentivorans DS-1 polar amino acid ABC transporter inner membrane subunit YP_001414250.1 3183148 D 402881 CDS YP_001414251.1 154253427 5456446 3184267..3185040 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mes:Meso_1116 ABC transporter related; ABC transporter-like protein 3185040 5456446 Plav_2987 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001414251.1 3184267 D 402881 CDS YP_001414252.1 154253428 5456964 complement(3185043..3185561) 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bov:BOV_1021 acetyltransferase, GNAT family; N-acetyltransferase GCN5 3185561 5456964 Plav_2988 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001414252.1 3185043 R 402881 CDS YP_001414253.1 154253429 5456426 complement(3185575..3186420) 1 NC_009719.1 PFAM: Rhodanese domain protein; KEGG: rsq:Rsph17025_0122 rhodanese domain protein; rhodanese domain-containing protein 3186420 5456426 Plav_2989 Parvibaculum lavamentivorans DS-1 rhodanese domain-containing protein YP_001414253.1 3185575 R 402881 CDS YP_001414254.1 154253430 5456039 complement(3186444..3187442) 1 NC_009719.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rpa:RPA2568 O-acetylserine (thiol) lyase; pyridoxal-5'-phosphate-dependent protein subunit beta 3187442 5456039 Plav_2990 Parvibaculum lavamentivorans DS-1 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001414254.1 3186444 R 402881 CDS YP_001414255.1 154253431 5456456 complement(3187560..3188174) 1 NC_009719.1 PFAM: NUDIX hydrolase; KEGG: ent:Ent638_3447 ADP-ribose diphosphatase; NUDIX hydrolase 3188174 5456456 Plav_2991 Parvibaculum lavamentivorans DS-1 NUDIX hydrolase YP_001414255.1 3187560 R 402881 CDS YP_001414256.1 154253432 5456392 complement(3188218..3189483) 1 NC_009719.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rle:RL1982 putative cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 3189483 5456392 Plav_2992 Parvibaculum lavamentivorans DS-1 cyclopropane-fatty-acyl-phospholipid synthase YP_001414256.1 3188218 R 402881 CDS YP_001414257.1 154253433 5456438 3189590..3191491 1 NC_009719.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sme:SMc01566 probable ATP-dependent DNA helicase protein; ATP-dependent DNA helicase RecQ 3191491 5456438 Plav_2993 Parvibaculum lavamentivorans DS-1 ATP-dependent DNA helicase RecQ YP_001414257.1 3189590 D 402881 CDS YP_001414258.1 154253434 5456432 complement(3192029..3193117) 1 NC_009719.1 PFAM: polysaccharide deacetylase; KEGG: bja:bll1083 hypothetical protein; polysaccharide deacetylase 3193117 5456432 Plav_2994 Parvibaculum lavamentivorans DS-1 polysaccharide deacetylase YP_001414258.1 3192029 R 402881 CDS YP_001414259.1 154253435 5456413 3193236..3194549 1 NC_009719.1 KEGG: nha:Nham_2462 hypothetical protein; hypothetical protein 3194549 5456413 Plav_2995 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414259.1 3193236 D 402881 CDS YP_001414260.1 154253436 5456397 3194561..3195940 1 NC_009719.1 PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: atc:AGR_L_2615 hypothetical protein; polysaccharide biosynthesis protein 3195940 5456397 Plav_2996 Parvibaculum lavamentivorans DS-1 polysaccharide biosynthesis protein YP_001414260.1 3194561 D 402881 CDS YP_001414261.1 154253437 5456372 3195951..3197243 1 NC_009719.1 KEGG: eli:ELI_02565 hypothetical protein; hypothetical protein 3197243 5456372 Plav_2997 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414261.1 3195951 D 402881 CDS YP_001414262.1 154253438 5456400 3197227..3198138 1 NC_009719.1 KEGG: nha:Nham_1520 transcription factor jumonji/aspartyl beta-hydroxylase; transcription factor jumonji/aspartyl beta-hydroxylase 3198138 5456400 Plav_2998 Parvibaculum lavamentivorans DS-1 transcription factor jumonji/aspartyl beta-hydroxylase YP_001414262.1 3197227 D 402881 CDS YP_001414263.1 154253439 5456379 complement(3198146..3200362) 1 NC_009719.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: mag:amb1450 succinoglycan biosynthesis transport protein ExoP; non-specific protein-tyrosine kinase 3200362 5456379 Plav_2999 Parvibaculum lavamentivorans DS-1 non-specific protein-tyrosine kinase YP_001414263.1 3198146 R 402881 CDS YP_001414264.1 154253440 5456388 3200630..3201190 1 NC_009719.1 PFAM: polysaccharide export protein; KEGG: rpd:RPD_4418 polysaccharide export protein; polysaccharide export protein 3201190 5456388 Plav_3000 Parvibaculum lavamentivorans DS-1 polysaccharide export protein YP_001414264.1 3200630 D 402881 CDS YP_001414265.1 154253441 5456233 3201190..3202410 1 NC_009719.1 PFAM: glycosyl transferase group 1; KEGG: bra:BRADO4230 putative glycosyl transferase, group 1; group 1 glycosyl transferase 3202410 5456233 Plav_3001 Parvibaculum lavamentivorans DS-1 group 1 glycosyl transferase YP_001414265.1 3201190 D 402881 CDS YP_001414266.1 154253442 5455792 3202412..3203737 1 NC_009719.1 KEGG: atc:AGR_C_2278 hypothetical protein; hypothetical protein 3203737 5455792 Plav_3002 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414266.1 3202412 D 402881 CDS YP_001414267.1 154253443 5456247 3204050..3204712 1 NC_009719.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; methyltransferase small; Methyltransferase type 11; KEGG: rru:Rru_A1799 protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 3204712 5456247 Plav_3003 Parvibaculum lavamentivorans DS-1 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001414267.1 3204050 D 402881 CDS YP_001414268.1 154253444 5456246 3204860..3206254 1 NC_009719.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: rru:Rru_A1798 type I secretion outer membrane protein, TolC; TolC family type I secretion outer membrane protein 3206254 5456246 Plav_3004 Parvibaculum lavamentivorans DS-1 TolC family type I secretion outer membrane protein YP_001414268.1 3204860 D 402881 CDS YP_001414269.1 154253445 5455745 3206428..3207087 1 NC_009719.1 KEGG: rpc:RPC_2569 hypothetical protein; hypothetical protein 3207087 5455745 Plav_3005 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414269.1 3206428 D 402881 CDS YP_001414270.1 154253446 5456209 3207194..3209923 1 NC_009719.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 3209923 valS 5456209 valS Parvibaculum lavamentivorans DS-1 valyl-tRNA synthetase YP_001414270.1 3207194 D 402881 CDS YP_001414271.1 154253447 5456254 complement(3210095..3210334) 1 NC_009719.1 hypothetical protein 3210334 5456254 Plav_3007 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414271.1 3210095 R 402881 CDS YP_001414272.1 154253448 5456252 complement(3210483..3210845) 1 NC_009719.1 KEGG: rsq:Rsph17025_1177 hypothetical protein; hypothetical protein 3210845 5456252 Plav_3008 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414272.1 3210483 R 402881 CDS YP_001414273.1 154253449 5455631 complement(3211014..3212099) 1 NC_009719.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: alcohol dehydrogenase class III; alcohol dehydrogenase 3212099 5455631 Plav_3009 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001414273.1 3211014 R 402881 CDS YP_001414274.1 154253450 5455283 3212320..3214050 1 NC_009719.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 3214050 5455283 Plav_3010 Parvibaculum lavamentivorans DS-1 dihydroxy-acid dehydratase YP_001414274.1 3212320 D 402881 CDS YP_001414275.1 154253451 5456274 3214227..3215063 1 NC_009719.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: sfu:Sfum_1484 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 3215063 5456274 Plav_3011 Parvibaculum lavamentivorans DS-1 Sel1 domain-containing protein YP_001414275.1 3214227 D 402881 CDS YP_001414276.1 154253452 5456228 complement(3215143..3215526) 1 NC_009719.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: rpa:RPA4824 hypothetical protein; ethyl tert-butyl ether degradation EthD 3215526 5456228 Plav_3012 Parvibaculum lavamentivorans DS-1 ethyl tert-butyl ether degradation EthD YP_001414276.1 3215143 R 402881 CDS YP_001414277.1 154253453 5454092 3215694..3217241 1 NC_009719.1 PFAM: conserved hypothetical protein; MlrC domain protein; KEGG: rpa:RPA1213 hypothetical protein; MlrC domain-containing protein 3217241 5454092 Plav_3013 Parvibaculum lavamentivorans DS-1 MlrC domain-containing protein YP_001414277.1 3215694 D 402881 CDS YP_001414278.1 154253454 5456067 complement(3217244..3217690) 1 NC_009719.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ppf:Pput_3744 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 3217690 5456067 Plav_3014 Parvibaculum lavamentivorans DS-1 antibiotic biosynthesis monooxygenase YP_001414278.1 3217244 R 402881 CDS YP_001414279.1 154253455 5456112 3217793..3218695 1 NC_009719.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: bbr:BB2415 putative AraC-family transcriptional regulator; AraC-like transcriptional regulator 3218695 5456112 Plav_3015 Parvibaculum lavamentivorans DS-1 AraC-like transcriptional regulator YP_001414279.1 3217793 D 402881 CDS YP_001414280.1 154253456 5456201 complement(3218705..3219499) 1 NC_009719.1 PFAM: penicillin-binding protein transpeptidase; KEGG: mca:MCA2220 beta-lactamase; beta-lactamase 3219499 5456201 Plav_3016 Parvibaculum lavamentivorans DS-1 beta-lactamase YP_001414280.1 3218705 R 402881 CDS YP_001414281.1 154253457 5455935 complement(3219594..3220004) 1 NC_009719.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: rle:RL1541 hypothetical protein; glutathione-dependent formaldehyde-activating protein 3220004 5455935 Plav_3017 Parvibaculum lavamentivorans DS-1 glutathione-dependent formaldehyde-activating protein YP_001414281.1 3219594 R 402881 CDS YP_001414282.1 154253458 5456173 complement(3220295..3221080) 1 NC_009719.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rpa:RPA2861 exodeoxyribonuclease III; exodeoxyribonuclease III Xth 3221080 5456173 Plav_3018 Parvibaculum lavamentivorans DS-1 exodeoxyribonuclease III Xth YP_001414282.1 3220295 R 402881 CDS YP_001414283.1 154253459 5456146 complement(3221077..3221664) 1 NC_009719.1 PFAM: protein of unknown function DUF1457; hypothetical protein 3221664 5456146 Plav_3019 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414283.1 3221077 R 402881 CDS YP_001414284.1 154253460 5456134 complement(3221774..3222124) 1 NC_009719.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rpa:RPA2856 protein of unknown function, HesB/YadR/YfhF; iron-sulfur cluster assembly accessory protein 3222124 5456134 Plav_3020 Parvibaculum lavamentivorans DS-1 iron-sulfur cluster assembly accessory protein YP_001414284.1 3221774 R 402881 CDS YP_001414285.1 154253461 5456080 3222268..3223458 1 NC_009719.1 TIGRFAM: putative deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rru:Rru_A1780 deoxyguanosinetriphosphate triphosphohydrolase; putative deoxyguanosinetriphosphate triphosphohydrolase 3223458 5456080 Plav_3021 Parvibaculum lavamentivorans DS-1 putative deoxyguanosinetriphosphate triphosphohydrolase YP_001414285.1 3222268 D 402881 CDS YP_001414286.1 154253462 5456145 3223544..3225295 1 NC_009719.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 3225295 argS 5456145 argS Parvibaculum lavamentivorans DS-1 arginyl-tRNA synthetase YP_001414286.1 3223544 D 402881 CDS YP_001414287.1 154253463 5456120 3225295..3226125 1 NC_009719.1 PFAM: Sporulation domain protein; KEGG: mmr:Mmar10_1913 sporulation domain protein; sporulation domain-containing protein 3226125 5456120 Plav_3023 Parvibaculum lavamentivorans DS-1 sporulation domain-containing protein YP_001414287.1 3225295 D 402881 CDS YP_001414288.1 154253464 5456106 3226122..3227135 1 NC_009719.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: glycosyl hydrolase, family 3; beta-N-acetylhexosaminidase 3227135 5456106 Plav_3024 Parvibaculum lavamentivorans DS-1 beta-N-acetylhexosaminidase YP_001414288.1 3226122 D 402881 CDS YP_001414289.1 154253465 5455994 3227122..3228180 1 NC_009719.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: nwi:Nwi_1804 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA 3228180 5455994 Plav_3025 Parvibaculum lavamentivorans DS-1 chromosome segregation and condensation protein ScpA YP_001414289.1 3227122 D 402881 CDS YP_001414290.1 154253466 5456132 3228177..3228959 1 NC_009719.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: bbt:BBta_4418 hypothetical protein; putative transcriptional regulator 3228959 5456132 Plav_3026 Parvibaculum lavamentivorans DS-1 putative transcriptional regulator YP_001414290.1 3228177 D 402881 CDS YP_001414291.1 154253467 5456083 3229165..3229395 1 NC_009719.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: swi:Swit_3930 twin-arginine translocation protein, TatA/E family subunit; twin arginine-targeting protein translocase 3229395 5456083 Plav_3027 Parvibaculum lavamentivorans DS-1 twin arginine-targeting protein translocase YP_001414291.1 3229165 D 402881 CDS YP_001414292.1 154253468 5456005 3229456..3229935 1 NC_009719.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: rsh:Rsph17029_1200 twin-arginine translocation protein, TatB subunit; twin-arginine translocation protein subunit TatB 3229935 5456005 Plav_3028 Parvibaculum lavamentivorans DS-1 twin-arginine translocation protein subunit TatB YP_001414292.1 3229456 D 402881 CDS YP_001414293.1 154253469 5456077 3229932..3230750 1 NC_009719.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: rpc:RPC_2515 sec-independent protein translocase TatC; Sec-independent protein translocase subunit TatC 3230750 5456077 Plav_3029 Parvibaculum lavamentivorans DS-1 Sec-independent protein translocase subunit TatC YP_001414293.1 3229932 D 402881 CDS YP_001414294.1 154253470 5455915 3230885..3232192 1 NC_009719.1 TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); seryl-tRNA synthetase class IIa; KEGG: sme:SMc02064 seryl-tRNA synthetase; seryl-tRNA synthetase 3232192 5455915 Plav_3030 Parvibaculum lavamentivorans DS-1 seryl-tRNA synthetase YP_001414294.1 3230885 D 402881 CDS YP_001414295.1 154253471 5456062 3232185..3233018 1 NC_009719.1 TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; KEGG: mmr:Mmar10_1904 stationary-phase survival protein SurE; stationary-phase survival protein SurE 3233018 5456062 Plav_3031 Parvibaculum lavamentivorans DS-1 stationary-phase survival protein SurE YP_001414295.1 3232185 D 402881 CDS YP_001414296.1 154253472 5456059 3233027..3233695 1 NC_009719.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: mag:amb2519 protein-L-isoaspartate carboxylmethyltransferase; protein-L-isoaspartate O-methyltransferase 3233695 5456059 Plav_3032 Parvibaculum lavamentivorans DS-1 protein-L-isoaspartate O-methyltransferase YP_001414296.1 3233027 D 402881 CDS YP_001414297.1 154253473 5455986 3233728..3234714 1 NC_009719.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: mag:amb2518 membrane protein related to metalloendopeptidase; peptidase M23B 3234714 5455986 Plav_3033 Parvibaculum lavamentivorans DS-1 peptidase M23B YP_001414297.1 3233728 D 402881 CDS YP_001414298.1 154253474 5456047 complement(3234724..3235638) 1 NC_009719.1 PFAM: protein of unknown function DUF815; KEGG: mes:Meso_1799 protein of unknown function DUF815; hypothetical protein 3235638 5456047 Plav_3034 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414298.1 3234724 R 402881 CDS YP_001414299.1 154253475 5456032 3235812..3236126 1 NC_009719.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: rpd:RPD_2778 preprotein translocase, YajC subunit; preprotein translocase subunit YajC 3236126 5456032 Plav_3035 Parvibaculum lavamentivorans DS-1 preprotein translocase subunit YajC YP_001414299.1 3235812 D 402881 CDS YP_001414300.1 154253476 5455963 3236166..3237773 1 NC_009719.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 3237773 secD 5455963 secD Parvibaculum lavamentivorans DS-1 preprotein translocase subunit SecD YP_001414300.1 3236166 D 402881 CDS YP_001414301.1 154253477 5456002 3237796..3238746 1 NC_009719.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: nwi:Nwi_1768 SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF 3238746 5456002 Plav_3037 Parvibaculum lavamentivorans DS-1 protein-export membrane protein SecF YP_001414301.1 3237796 D 402881 CDS YP_001414302.1 154253478 5455468 3238756..3239124 1 NC_009719.1 PFAM: protein of unknown function DUF498; KEGG: rru:Rru_A1762 protein of unknown function DUF598; hypothetical protein 3239124 5455468 Plav_3038 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414302.1 3238756 D 402881 CDS YP_001414303.1 154253479 5455954 3239296..3239910 1 NC_009719.1 KEGG: mmr:Mmar10_1897 hypothetical protein; hypothetical protein 3239910 5455954 Plav_3039 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414303.1 3239296 D 402881 CDS YP_001414304.1 154253480 5455952 3239977..3240822 1 NC_009719.1 KEGG: atc:AGR_C_2873 putative phytoene synthase; putative phytoene synthase 3240822 5455952 Plav_3040 Parvibaculum lavamentivorans DS-1 putative phytoene synthase YP_001414304.1 3239977 D 402881 CDS YP_001414305.1 154253481 5455434 complement(3240823..3242265) 1 NC_009719.1 TIGRFAM: gid protein; PFAM: glucose-inhibited division protein A; KEGG: mlo:mlr1064 glucose-inhibited division protein; hypothetical protein 3242265 5455434 Plav_3041 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414305.1 3240823 R 402881 CDS YP_001414306.1 154253482 5456000 complement(3242692..3244122) 1 NC_009719.1 PFAM: Amidase; KEGG: hne:HNE_1602 putative 6-aminohexanoate-cyclic-dimer hydrolase; amidase 3244122 5456000 Plav_3042 Parvibaculum lavamentivorans DS-1 amidase YP_001414306.1 3242692 R 402881 CDS YP_001414307.1 154253483 5455961 complement(3244143..3245570) 1 NC_009719.1 PFAM: Amidase; KEGG: mxa:MXAN_2852 amidase family protein; amidase 3245570 5455961 Plav_3043 Parvibaculum lavamentivorans DS-1 amidase YP_001414307.1 3244143 R 402881 CDS YP_001414308.1 154253484 5455953 complement(3245650..3247782) 1 NC_009719.1 PFAM: Alkaline phosphatase; KEGG: aba:Acid345_3950 phosphodiesterase/alkaline phosphatase D; alkaline phosphatase 3247782 5455953 Plav_3044 Parvibaculum lavamentivorans DS-1 alkaline phosphatase YP_001414308.1 3245650 R 402881 CDS YP_001414309.1 154253485 5455929 complement(3247857..3250934) 1 NC_009719.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: bms:BR1104 excinuclease ABC, A subunit; excinuclease ABC subunit A 3250934 5455929 Plav_3045 Parvibaculum lavamentivorans DS-1 excinuclease ABC subunit A YP_001414309.1 3247857 R 402881 CDS YP_001414310.1 154253486 5456952 3251117..3251389 1 NC_009719.1 KEGG: rpc:RPC_2516 hypothetical protein; hypothetical protein 3251389 5456952 Plav_3046 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414310.1 3251117 D 402881 CDS YP_001414311.1 154253487 5455885 3251480..3251959 1 NC_009719.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 3251959 5455885 Plav_3047 Parvibaculum lavamentivorans DS-1 single-stranded DNA-binding protein YP_001414311.1 3251480 D 402881 CDS YP_001414312.1 154253488 5455889 3251983..3252840 1 NC_009719.1 KEGG: pen:PSEEN2349 hypothetical protein; hypothetical protein 3252840 5455889 Plav_3048 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414312.1 3251983 D 402881 CDS YP_001414313.1 154253489 5455794 3253018..3255915 1 NC_009719.1 TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: rpe:RPE_2764 DNA gyrase, A subunit; DNA gyrase subunit A 3255915 5455794 Plav_3049 Parvibaculum lavamentivorans DS-1 DNA gyrase subunit A YP_001414313.1 3253018 D 402881 CDS YP_001414314.1 154253490 5455903 3255927..3256439 1 NC_009719.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain; PFAM: cytidylyltransferase; KEGG: bja:bll4693 phosphopantetheine adenylyltransferase; pantetheine-phosphate adenylyltransferase 3256439 5455903 Plav_3050 Parvibaculum lavamentivorans DS-1 pantetheine-phosphate adenylyltransferase YP_001414314.1 3255927 D 402881 CDS YP_001414315.1 154253491 5455501 3256477..3257022 1 NC_009719.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: swi:Swit_3531 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 3257022 5455501 Plav_3051 Parvibaculum lavamentivorans DS-1 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001414315.1 3256477 D 402881 CDS YP_001414316.1 154253492 5455853 3257045..3257518 1 NC_009719.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mes:Meso_1404 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 3257518 5455853 Plav_3052 Parvibaculum lavamentivorans DS-1 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001414316.1 3257045 D 402881 CDS YP_001414317.1 154253493 5455612 3257743..3258795 1 NC_009719.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 3258795 queA 5455612 queA Parvibaculum lavamentivorans DS-1 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_001414317.1 3257743 D 402881 CDS YP_001414318.1 154253494 5455817 3258792..3259931 1 NC_009719.1 TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; KEGG: pde:Pden_1891 queuine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 3259931 5455817 Plav_3054 Parvibaculum lavamentivorans DS-1 queuine tRNA-ribosyltransferase YP_001414318.1 3258792 D 402881 CDS YP_001414319.1 154253495 5455772 complement(3259935..3262496) 1 NC_009719.1 PFAM: Pyrrolo-quinoline quinone; KEGG: rsq:Rsph17025_3339 GntR domain protein; Pyrrolo-quinoline quinone 3262496 5455772 Plav_3055 Parvibaculum lavamentivorans DS-1 Pyrrolo-quinoline quinone YP_001414319.1 3259935 R 402881 CDS YP_001414320.1 154253496 5455207 3262970..3263491 1 NC_009719.1 KEGG: eli:ELI_03550 hypothetical protein; hypothetical protein 3263491 5455207 Plav_3056 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414320.1 3262970 D 402881 CDS YP_001414321.1 154253497 5455690 3263509..3263943 1 NC_009719.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bbt:BBta_3548 hypothetical protein; glutathione-dependent formaldehyde-activating protein 3263943 5455690 Plav_3057 Parvibaculum lavamentivorans DS-1 glutathione-dependent formaldehyde-activating protein YP_001414321.1 3263509 D 402881 CDS YP_001414322.1 154253498 5455770 complement(3263982..3264383) 1 NC_009719.1 KEGG: bmb:BruAb2_0611 hypothetical Rnk transcriptional regulator; GreA/GreB family elongation factor 3264383 5455770 Plav_3058 Parvibaculum lavamentivorans DS-1 GreA/GreB family elongation factor YP_001414322.1 3263982 R 402881 CDS YP_001414323.1 154253499 5455809 complement(3264397..3264912) 1 NC_009719.1 KEGG: nmu:Nmul_A0938 GreA/GreB family elongation factor; GreA/GreB family elongation factor 3264912 5455809 Plav_3059 Parvibaculum lavamentivorans DS-1 GreA/GreB family elongation factor YP_001414323.1 3264397 R 402881 CDS YP_001414324.1 154253500 5455634 3265296..3266177 1 NC_009719.1 PFAM: SH3 type 3 domain protein; SMART: helix-turn-helix domain protein; SH3 domain protein; KEGG: bur:Bcep18194_A5114 transcriptional regulator, XRE family; SH3 type 3 domain-containing protein 3266177 5455634 Plav_3060 Parvibaculum lavamentivorans DS-1 SH3 type 3 domain-containing protein YP_001414324.1 3265296 D 402881 CDS YP_001414325.1 154253501 5455777 complement(3266358..3266999) 1 NC_009719.1 PFAM: carbonic anhydrase; KEGG: ret:RHE_CH04103 carbonic anhydrase protein; carbonate dehydratase 3266999 5455777 Plav_3061 Parvibaculum lavamentivorans DS-1 carbonate dehydratase YP_001414325.1 3266358 R 402881 CDS YP_001414326.1 154253502 5455705 3267233..3267553 1 NC_009719.1 hypothetical protein 3267553 5455705 Plav_3062 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414326.1 3267233 D 402881 CDS YP_001414327.1 154253503 5455448 3267721..3268515 1 NC_009719.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 3268515 5455448 Plav_3063 Parvibaculum lavamentivorans DS-1 sulfate adenylyltransferase subunit 2 YP_001414327.1 3267721 D 402881 CDS YP_001414328.1 154253504 5455689 3268528..3270447 1 NC_009719.1 TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; adenylylsulfate kinase; elongation factor Tu domain 2 protein; KEGG: mag:amb2212 NodQ bifunctional enzyme; sulfate adenylyltransferase large subunit 3270447 5455689 Plav_3064 Parvibaculum lavamentivorans DS-1 sulfate adenylyltransferase large subunit YP_001414328.1 3268528 D 402881 CDS YP_001414329.1 154253505 5455215 3270480..3271466 1 NC_009719.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: mlo:mlr5697 UDP-galactose 4-epimerase; UDP-glucose 4-epimerase 3271466 5455215 Plav_3065 Parvibaculum lavamentivorans DS-1 UDP-glucose 4-epimerase YP_001414329.1 3270480 D 402881 CDS YP_001414330.1 154253506 5455743 3271601..3272959 1 NC_009719.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: rpd:RPD_2617 nucleotidyl transferase; nucleotidyl transferase 3272959 5455743 Plav_3066 Parvibaculum lavamentivorans DS-1 nucleotidyl transferase YP_001414330.1 3271601 D 402881 CDS YP_001414331.1 154253507 5453748 3272961..3274784 1 NC_009719.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: sal:Sala_1366 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; glucosamine--fructose-6-phosphate aminotransferase 3274784 5453748 Plav_3067 Parvibaculum lavamentivorans DS-1 glucosamine--fructose-6-phosphate aminotransferase YP_001414331.1 3272961 D 402881 CDS YP_001414332.1 154253508 5455673 3274955..3276241 1 NC_009719.1 PFAM: TPR repeat-containing protein; Sporulation domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pmf:P9303_28481 hypothetical protein; sporulation domain-containing protein 3276241 5455673 Plav_3068 Parvibaculum lavamentivorans DS-1 sporulation domain-containing protein YP_001414332.1 3274955 D 402881 CDS YP_001414333.1 154253509 5455716 3276387..3277895 1 NC_009719.1 PFAM: protein of unknown function DUF35; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: hypothetical protein; hypothetical protein 3277895 5455716 Plav_3069 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414333.1 3276387 D 402881 CDS YP_001414334.1 154253510 5455610 3277908..3279110 1 NC_009719.1 KEGG: thiolase family protein; acetyl-CoA acetyltransferase 3279110 5455610 Plav_3070 Parvibaculum lavamentivorans DS-1 acetyl-CoA acetyltransferase YP_001414334.1 3277908 D 402881 CDS YP_001414335.1 154253511 5455583 3279248..3280756 1 NC_009719.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: mgm:Mmc1_0390 membrane bound O-acyl transferase, MBOAT family protein; membrane bound O-acyl transferase MBOAT family protein 3280756 5455583 Plav_3071 Parvibaculum lavamentivorans DS-1 membrane bound O-acyl transferase MBOAT family protein YP_001414335.1 3279248 D 402881 CDS YP_001414336.1 154253512 5455504 3280760..3281782 1 NC_009719.1 KEGG: mgm:Mmc1_0389 hypothetical protein; hypothetical protein 3281782 5455504 Plav_3072 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414336.1 3280760 D 402881 CDS YP_001414337.1 154253513 5455681 complement(3281779..3282276) 1 NC_009719.1 PFAM: protein of unknown function DUF1457; hypothetical protein 3282276 5455681 Plav_3073 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414337.1 3281779 R 402881 CDS YP_001414338.1 154253514 5455611 complement(3282381..3283505) 1 NC_009719.1 KEGG: swi:Swit_0600 hypothetical protein; hypothetical protein 3283505 5455611 Plav_3074 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414338.1 3282381 R 402881 CDS YP_001414339.1 154253515 5455655 complement(3283508..3283891) 1 NC_009719.1 KEGG: rpb:RPB_3603 hypothetical protein; hypothetical protein 3283891 5455655 Plav_3075 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414339.1 3283508 R 402881 CDS YP_001414340.1 154253516 5455581 complement(3283892..3284905) 1 NC_009719.1 PFAM: aminoglycoside phosphotransferase; KEGG: bja:blr2944 hypothetical protein; aminoglycoside phosphotransferase 3284905 5455581 Plav_3076 Parvibaculum lavamentivorans DS-1 aminoglycoside phosphotransferase YP_001414340.1 3283892 R 402881 CDS YP_001414341.1 154253517 5455544 complement(3284907..3285941) 1 NC_009719.1 KEGG: hne:HNE_2392 hypothetical protein; hypothetical protein 3285941 5455544 Plav_3077 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414341.1 3284907 R 402881 CDS YP_001414342.1 154253518 5455487 3286137..3286886 1 NC_009719.1 PFAM: protein of unknown function DUF502; KEGG: mlo:mll0832 hypothetical protein; hypothetical protein 3286886 5455487 Plav_3078 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414342.1 3286137 D 402881 CDS YP_001414343.1 154253519 5455428 complement(3286872..3288956) 1 NC_009719.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 3288956 5455428 Plav_3079 Parvibaculum lavamentivorans DS-1 ATP-dependent DNA helicase RecG YP_001414343.1 3286872 R 402881 CDS YP_001414344.1 154253520 5455627 3289054..3289359 1 NC_009719.1 PFAM: protein of unknown function DUF339; KEGG: rpb:RPB_2851 protein of unknown function DUF339; hypothetical protein 3289359 5455627 Plav_3080 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414344.1 3289054 D 402881 CDS YP_001414345.1 154253521 5456929 3289376..3292891 1 NC_009719.1 TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bbt:BBta_4157 transcription repair coupling factor; transcription-repair coupling factor 3292891 5456929 Plav_3081 Parvibaculum lavamentivorans DS-1 transcription-repair coupling factor YP_001414345.1 3289376 D 402881 CDS YP_001414346.1 154253522 5455591 complement(3292895..3293545) 1 NC_009719.1 PFAM: DSBA oxidoreductase; KEGG: mlo:mlr0515 similar to FrnE protein; DSBA oxidoreductase 3293545 5455591 Plav_3082 Parvibaculum lavamentivorans DS-1 DSBA oxidoreductase YP_001414346.1 3292895 R 402881 CDS YP_001414347.1 154253523 5454482 3293702..3294481 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rme:Rmet_1147 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3294481 5454482 Plav_3083 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001414347.1 3293702 D 402881 CDS YP_001414348.1 154253524 5455263 3294546..3294857 1 NC_009719.1 hypothetical protein 3294857 5455263 Plav_3084 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414348.1 3294546 D 402881 CDS YP_001414349.1 154253525 5454281 3294976..3296430 1 NC_009719.1 TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: hha:Hhal_0554 sodium/proline symporter; sodium/proline symporter 3296430 5454281 Plav_3085 Parvibaculum lavamentivorans DS-1 sodium/proline symporter YP_001414349.1 3294976 D 402881 CDS YP_001414350.1 154253526 5455585 3296473..3296745 1 NC_009719.1 hypothetical protein 3296745 5455585 Plav_3086 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414350.1 3296473 D 402881 CDS YP_001414351.1 154253527 5455507 complement(3296746..3298326) 1 NC_009719.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sil:SPO2069 benzoate-coenzyme A ligase, putative; AMP-dependent synthetase and ligase 3298326 5455507 Plav_3087 Parvibaculum lavamentivorans DS-1 AMP-dependent synthetase and ligase YP_001414351.1 3296746 R 402881 CDS YP_001414352.1 154253528 5456895 3298444..3299574 1 NC_009719.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: hypothetical protein; L-carnitine dehydratase/bile acid-inducible protein F 3299574 5456895 Plav_3088 Parvibaculum lavamentivorans DS-1 L-carnitine dehydratase/bile acid-inducible protein F YP_001414352.1 3298444 D 402881 CDS YP_001414353.1 154253529 5455463 3299571..3300329 1 NC_009719.1 PFAM: Phosphoglycerate mutase; KEGG: hne:HNE_1982 phosphoglycerate mutase family protein; phosphoglycerate mutase 3300329 5455463 Plav_3089 Parvibaculum lavamentivorans DS-1 phosphoglycerate mutase YP_001414353.1 3299571 D 402881 CDS YP_001414354.1 154253530 5455545 complement(3300326..3301987) 1 NC_009719.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sal:Sala_1007 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 3301987 5455545 Plav_3090 Parvibaculum lavamentivorans DS-1 AMP-dependent synthetase and ligase YP_001414354.1 3300326 R 402881 CDS YP_001414355.1 154253531 5455443 complement(3302029..3302952) 1 NC_009719.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: sal:Sala_1009 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 3302952 5455443 Plav_3091 Parvibaculum lavamentivorans DS-1 2-nitropropane dioxygenase YP_001414355.1 3302029 R 402881 CDS YP_001414356.1 154253532 5455475 complement(3303024..3304376) 1 NC_009719.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: csa:Csal_3004 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 3304376 5455475 Plav_3092 Parvibaculum lavamentivorans DS-1 aromatic hydrocarbon degradation membrane protein YP_001414356.1 3303024 R 402881 CDS YP_001414357.1 154253533 5456927 complement(3304552..3306474) 1 NC_009719.1 PFAM: extracellular solute-binding protein family 5; KEGG: nha:Nham_2050 extracellular solute-binding protein, family 5; extracellular solute-binding protein 3306474 5456927 Plav_3093 Parvibaculum lavamentivorans DS-1 extracellular solute-binding protein YP_001414357.1 3304552 R 402881 CDS YP_001414358.1 154253534 5454233 3306563..3307120 1 NC_009719.1 PFAM: Invasion associated locus B family protein; KEGG: rpa:RPA0830 hypothetical protein; invasion associated locus B family protein 3307120 5454233 Plav_3094 Parvibaculum lavamentivorans DS-1 invasion associated locus B family protein YP_001414358.1 3306563 D 402881 CDS YP_001414359.1 154253535 5455494 complement(3307117..3307836) 1 NC_009719.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: sde:Sde_3507 acetyltransferase (isoleucine patch superfamily)-like; hexapaptide repeat-containing transferase 3307836 5455494 Plav_3095 Parvibaculum lavamentivorans DS-1 hexapaptide repeat-containing transferase YP_001414359.1 3307117 R 402881 CDS YP_001414360.1 154253536 5455338 complement(3307941..3308273) 1 NC_009719.1 TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: rpc:RPC_2615 hemimethylated DNA-binding region; hemimethylated DNA-binding protein 3308273 5455338 Plav_3096 Parvibaculum lavamentivorans DS-1 hemimethylated DNA-binding protein YP_001414360.1 3307941 R 402881 CDS YP_001414361.1 154253537 5454806 3308434..3309537 1 NC_009719.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pat:Patl_1928 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 3309537 5454806 Plav_3097 Parvibaculum lavamentivorans DS-1 NADH:flavin oxidoreductase YP_001414361.1 3308434 D 402881 CDS YP_001414362.1 154253538 5454807 complement(3309547..3310662) 1 NC_009719.1 PFAM: HpcH/HpaI aldolase; KEGG: rrs:RoseRS_4173 HpcH/HpaI aldolase; HpcH/HpaI aldolase 3310662 5454807 Plav_3098 Parvibaculum lavamentivorans DS-1 HpcH/HpaI aldolase YP_001414362.1 3309547 R 402881 CDS YP_001414363.1 154253539 5455395 complement(3310663..3311955) 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: sat:SYN_00428 oxalate/formate antiporter; major facilitator superfamily transporter 3311955 5455395 Plav_3099 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001414363.1 3310663 R 402881 CDS YP_001414364.1 154253540 5455281 complement(3312038..3312607) 1 NC_009719.1 KEGG: swi:Swit_1601 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 3312607 5455281 Plav_3100 Parvibaculum lavamentivorans DS-1 hexapaptide repeat-containing transferase YP_001414364.1 3312038 R 402881 CDS YP_001414365.1 154253541 5455432 complement(3312600..3313883) 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr1018 hypothetical protein; major facilitator superfamily transporter 3313883 5455432 Plav_3101 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001414365.1 3312600 R 402881 CDS YP_001414366.1 154253542 5454176 3314045..3314662 1 NC_009719.1 PFAM: Glutathione S-transferase domain; KEGG: rpa:RPA1576 putative glutathione S-transferase; glutathione S-transferase domain-containing protein 3314662 5454176 Plav_3102 Parvibaculum lavamentivorans DS-1 glutathione S-transferase domain-containing protein YP_001414366.1 3314045 D 402881 CDS YP_001414367.1 154253543 5455299 3314782..3315198 1 NC_009719.1 hypothetical protein 3315198 5455299 Plav_3103 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414367.1 3314782 D 402881 CDS YP_001414368.1 154253544 5455381 3315252..3315671 1 NC_009719.1 PFAM: thioesterase superfamily protein; KEGG: sen:SACE_1886 phenylacetic acid degradation-related protein; thioesterase superfamily protein 3315671 5455381 Plav_3104 Parvibaculum lavamentivorans DS-1 thioesterase superfamily protein YP_001414368.1 3315252 D 402881 CDS YP_001414369.1 154253545 5455276 3315909..3316814 1 NC_009719.1 PFAM: protein of unknown function DUF72; KEGG: mes:Meso_3462 protein of unknown function DUF72; hypothetical protein 3316814 5455276 Plav_3105 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414369.1 3315909 D 402881 CDS YP_001414370.1 154253546 5454121 3316969..3317298 1 NC_009719.1 hypothetical protein 3317298 5454121 Plav_3106 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414370.1 3316969 D 402881 CDS YP_001414371.1 154253547 5455290 complement(3317315..3318658) 1 NC_009719.1 PFAM: MmgE/PrpD family protein; KEGG: hne:HNE_1103 MmgE/PrpD family protein; MmgE/PrpD family protein 3318658 5455290 Plav_3107 Parvibaculum lavamentivorans DS-1 MmgE/PrpD family protein YP_001414371.1 3317315 R 402881 CDS YP_001414372.1 154253548 5455308 3318848..3319867 1 NC_009719.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: mag:amb2452 lipoprotein; rare lipoprotein A 3319867 5455308 Plav_3108 Parvibaculum lavamentivorans DS-1 rare lipoprotein A YP_001414372.1 3318848 D 402881 CDS YP_001414373.1 154253549 5454230 3319905..3321059 1 NC_009719.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: rru:Rru_A1704 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 3321059 5454230 Plav_3109 Parvibaculum lavamentivorans DS-1 serine-type D-Ala-D-Ala carboxypeptidase YP_001414373.1 3319905 D 402881 CDS YP_001414374.1 154253550 5455303 3321062..3321691 1 NC_009719.1 PFAM: thymidylate kinase; KEGG: mag:amb2450 thymidylate kinase; dTMP kinase 3321691 5455303 Plav_3110 Parvibaculum lavamentivorans DS-1 dTMP kinase YP_001414374.1 3321062 D 402881 CDS YP_001414375.1 154253551 5455271 3321826..3322503 1 NC_009719.1 PFAM: peptidase M23B; KEGG: rru:Rru_A0504 peptidase M23B; peptidase M23B 3322503 5455271 Plav_3111 Parvibaculum lavamentivorans DS-1 peptidase M23B YP_001414375.1 3321826 D 402881 CDS YP_001414376.1 154253552 5453403 3322629..3323792 1 NC_009719.1 KEGG: mag:amb2449 ATPase involved in DNA replication; DNA replication ATPase 3323792 5453403 Plav_3112 Parvibaculum lavamentivorans DS-1 DNA replication ATPase YP_001414376.1 3322629 D 402881 CDS YP_001414377.1 154253553 5454287 3323933..3325495 1 NC_009719.1 TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia; KEGG: mes:Meso_1583 methionyl-tRNA synthetase; methionyl-tRNA synthetase 3325495 5454287 Plav_3113 Parvibaculum lavamentivorans DS-1 methionyl-tRNA synthetase YP_001414377.1 3323933 D 402881 CDS YP_001414378.1 154253554 5455038 3325492..3326298 1 NC_009719.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; amidohydrolase 2; KEGG: mes:Meso_1584 hydrolase, TatD family; TatD family hydrolase 3326298 5455038 Plav_3114 Parvibaculum lavamentivorans DS-1 TatD family hydrolase YP_001414378.1 3325492 D 402881 CDS YP_001414379.1 154253555 5454045 3326295..3327113 1 NC_009719.1 KEGG: mmr:Mmar10_1451 beta-lactamase-like protein; beta-lactamase-like protein 3327113 5454045 Plav_3115 Parvibaculum lavamentivorans DS-1 beta-lactamase-like protein YP_001414379.1 3326295 D 402881 CDS YP_001414380.1 154253556 5454720 complement(3327182..3327574) 1 NC_009719.1 hypothetical protein 3327574 5454720 Plav_3116 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414380.1 3327182 R 402881 CDS YP_001414381.1 154253557 5456861 complement(3327794..3328180) 1 NC_009719.1 KEGG: bce:BC4527 hypothetical membrane spanning protein; hypothetical protein 3328180 5456861 Plav_3117 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414381.1 3327794 R 402881 CDS YP_001414382.1 154253558 5456928 complement(3328572..3329459) 1 NC_009719.1 KEGG: pna:Pnap_3705 filamentous haemagglutinin family outer membrane protein; filamentous hemagglutinin outer membrane protein 3329459 5456928 Plav_3118 Parvibaculum lavamentivorans DS-1 filamentous hemagglutinin outer membrane protein YP_001414382.1 3328572 R 402881 CDS YP_001414383.1 154253559 5454780 3329817..3330467 1 NC_009719.1 PFAM: beta-lactamase domain protein; KEGG: rso:RSc3268 hypothetical protein; beta-lactamase domain-containing protein 3330467 5454780 Plav_3119 Parvibaculum lavamentivorans DS-1 beta-lactamase domain-containing protein YP_001414383.1 3329817 D 402881 CDS YP_001414384.1 154253560 5453964 3330623..3332041 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: ter:Tery_2105 sodium:galactoside symporter family protein; major facilitator superfamily transporter 3332041 5453964 Plav_3120 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001414384.1 3330623 D 402881 CDS YP_001414385.1 154253561 5454563 3332054..3332866 1 NC_009719.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: mazg protein; K02428 MazG protein; MazG family protein 3332866 5454563 Plav_3121 Parvibaculum lavamentivorans DS-1 MazG family protein YP_001414385.1 3332054 D 402881 CDS YP_001414386.1 154253562 5454729 complement(3332863..3333693) 1 NC_009719.1 PFAM: inositol monophosphatase; KEGG: stp:Strop_0369 inositol monophosphatase; inositol monophosphatase 3333693 5454729 Plav_3122 Parvibaculum lavamentivorans DS-1 inositol monophosphatase YP_001414386.1 3332863 R 402881 CDS YP_001414387.1 154253563 5454716 complement(3333695..3335119) 1 NC_009719.1 PFAM: GTP-binding protein HSR1-related; KEGG: ret:RHE_CH01955 GTP-binding protein; GTP-binding protein HSR1-like 3335119 5454716 Plav_3123 Parvibaculum lavamentivorans DS-1 GTP-binding protein HSR1-like YP_001414387.1 3333695 R 402881 CDS YP_001414388.1 154253564 5454725 complement(3335130..3335378) 1 NC_009719.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: host factor-I protein; K03666 host factor-I protein; RNA chaperone Hfq 3335378 5454725 Plav_3124 Parvibaculum lavamentivorans DS-1 RNA chaperone Hfq YP_001414388.1 3335130 R 402881 CDS YP_001414389.1 154253565 5455197 complement(3335583..3336440) 1 NC_009719.1 PFAM: aminotransferase class IV; KEGG: mes:Meso_1614 aminotransferase, class IV; class IV aminotransferase 3336440 5455197 Plav_3125 Parvibaculum lavamentivorans DS-1 class IV aminotransferase YP_001414389.1 3335583 R 402881 CDS YP_001414390.1 154253566 5453582 complement(3336459..3337835) 1 NC_009719.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 3337835 trkA 5453582 trkA Parvibaculum lavamentivorans DS-1 potassium transporter peripheral membrane protein YP_001414390.1 3336459 R 402881 CDS YP_001414391.1 154253567 5454652 complement(3337870..3339264) 1 NC_009719.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: rpd:RPD_2592 sigma-54 factor, interaction region; two component sigma-54 specific Fis family transcriptional regulator 3339264 5454652 Plav_3127 Parvibaculum lavamentivorans DS-1 two component sigma-54 specific Fis family transcriptional regulator YP_001414391.1 3337870 R 402881 CDS YP_001414392.1 154253568 5453735 complement(3339254..3341593) 1 NC_009719.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: mag:amb2368 signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; multi-sensor signal transduction histidine kinase 3341593 5453735 Plav_3128 Parvibaculum lavamentivorans DS-1 multi-sensor signal transduction histidine kinase YP_001414392.1 3339254 R 402881 CDS YP_001414393.1 154253569 5456873 complement(3341776..3343218) 1 NC_009719.1 TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bra:BRADO3866 nitrogen assimilation regulatory protein; nitrogen metabolism transcriptional regulator NtrC 3343218 5456873 Plav_3129 Parvibaculum lavamentivorans DS-1 nitrogen metabolism transcriptional regulator NtrC YP_001414393.1 3341776 R 402881 CDS YP_001414394.1 154253570 5453567 complement(3343244..3344359) 1 NC_009719.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: rpb:RPB_2883 signal transduction histidine kinase, nitrogen specific, NtrB; signal transduction histidine kinase, nitrogen specific, NtrB 3344359 5453567 Plav_3130 Parvibaculum lavamentivorans DS-1 signal transduction histidine kinase, nitrogen specific, NtrB YP_001414394.1 3343244 R 402881 CDS YP_001414395.1 154253571 5456916 complement(3344359..3345384) 1 NC_009719.1 TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; dihydroorotate dehydrogenase; KEGG: sil:SPO2089 tRNA-dihydrouridine synthase, putative; nifR3 family TIM-barrel protein 3345384 5456916 Plav_3131 Parvibaculum lavamentivorans DS-1 nifR3 family TIM-barrel protein YP_001414395.1 3344359 R 402881 CDS YP_001414396.1 154253572 5453865 3345497..3346645 1 NC_009719.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MECDP-synthase; KEGG: rru:Rru_A1674 bifunctional enzyme, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 3346645 5453865 Plav_3132 Parvibaculum lavamentivorans DS-1 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_001414396.1 3345497 D 402881 CDS YP_001414397.1 154253573 5454135 3346649..3347149 1 NC_009719.1 PFAM: phosphatidylglycerophosphatase A; KEGG: mag:amb2547 phosphatidylglycerophosphatase A and related protein; phosphatidylglycerophosphatase A 3347149 5454135 Plav_3133 Parvibaculum lavamentivorans DS-1 phosphatidylglycerophosphatase A YP_001414397.1 3346649 D 402881 CDS YP_001414398.1 154253574 5454653 3347146..3347640 1 NC_009719.1 PFAM: CinA domain protein; KEGG: hne:HNE_2017 CinA domain protein; CinA domain-containing protein 3347640 5454653 Plav_3134 Parvibaculum lavamentivorans DS-1 CinA domain-containing protein YP_001414398.1 3347146 D 402881 CDS YP_001414399.1 154253575 5456913 complement(3347643..3348128) 1 NC_009719.1 PFAM: cyclase/dehydrase; KEGG: pde:Pden_3870 cyclase/dehydrase; cyclase/dehydrase 3348128 5456913 Plav_3135 Parvibaculum lavamentivorans DS-1 cyclase/dehydrase YP_001414399.1 3347643 R 402881 CDS YP_001414400.1 154253576 5453757 complement(3348137..3349102) 1 NC_009719.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 3349102 5453757 Plav_3136 Parvibaculum lavamentivorans DS-1 lipoyl synthase YP_001414400.1 3348137 R 402881 CDS YP_001414401.1 154253577 5454824 complement(3349259..3350788) 1 NC_009719.1 PFAM: sulfatase; KEGG: vei:Veis_0934 sulfatase; sulfatase 3350788 5454824 Plav_3137 Parvibaculum lavamentivorans DS-1 sulfatase YP_001414401.1 3349259 R 402881 CDS YP_001414402.1 154253578 5455014 complement(3350880..3352277) 1 NC_009719.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: acr:Acry_2823 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 3352277 5455014 Plav_3138 Parvibaculum lavamentivorans DS-1 dihydrolipoamide dehydrogenase YP_001414402.1 3350880 R 402881 CDS YP_001414403.1 154253579 5456863 complement(3352277..3353569) 1 NC_009719.1 TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: pde:Pden_3890 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 3353569 5456863 Plav_3139 Parvibaculum lavamentivorans DS-1 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase YP_001414403.1 3352277 R 402881 CDS YP_001414404.1 154253580 5454554 complement(3353580..3354983) 1 NC_009719.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 3354983 5454554 Plav_3140 Parvibaculum lavamentivorans DS-1 pyruvate dehydrogenase subunit beta YP_001414404.1 3353580 R 402881 CDS YP_001414405.1 154253581 5454186 complement(3354987..3356012) 1 NC_009719.1 PFAM: dehydrogenase E1 component; KEGG: nha:Nham_1749 pyruvate dehydrogenase (lipoamide); pyruvate dehydrogenase (acetyl-transferring) 3356012 5454186 Plav_3141 Parvibaculum lavamentivorans DS-1 pyruvate dehydrogenase (acetyl-transferring) YP_001414405.1 3354987 R 402881 CDS YP_001414406.1 154253582 5454384 complement(3356198..3356551) 1 NC_009719.1 PFAM: Septum formation initiator; KEGG: mlo:mlr0382 hypothetical protein; septum formation initiator 3356551 5454384 Plav_3142 Parvibaculum lavamentivorans DS-1 septum formation initiator YP_001414406.1 3356198 R 402881 CDS YP_001414407.1 154253583 5454091 complement(3356621..3357895) 1 NC_009719.1 PFAM: enolase; KEGG: sme:SMc01028 probable enolase protein; phosphopyruvate hydratase 3357895 5454091 Plav_3143 Parvibaculum lavamentivorans DS-1 phosphopyruvate hydratase YP_001414407.1 3356621 R 402881 CDS YP_001414408.1 154253584 5454099 complement(3358005..3359918) 1 NC_009719.1 PFAM: extracellular solute-binding protein family 5; KEGG: hha:Hhal_0597 extracellular solute-binding protein, family 5; extracellular solute-binding protein 3359918 5454099 Plav_3144 Parvibaculum lavamentivorans DS-1 extracellular solute-binding protein YP_001414408.1 3358005 R 402881 CDS YP_001414409.1 154253585 5454093 3360122..3362485 1 NC_009719.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC0823 outer membrane hemin receptor; TonB-dependent receptor plug 3362485 5454093 Plav_3145 Parvibaculum lavamentivorans DS-1 TonB-dependent receptor plug YP_001414409.1 3360122 D 402881 CDS YP_001414410.1 154253586 5454130 complement(3362561..3363118) 1 NC_009719.1 PFAM: transcriptional regulator PadR family protein; KEGG: btk:BT9727_1669 transcriptional regulator, PadR family; PadR-like family transcriptional regulator 3363118 5454130 Plav_3146 Parvibaculum lavamentivorans DS-1 PadR-like family transcriptional regulator YP_001414410.1 3362561 R 402881 CDS YP_001414411.1 154253587 5453769 3365387..3366097 1 NC_009719.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: bbt:BBta_4081 hypothetical protein; exsB protein 3366097 5453769 Plav_3148 Parvibaculum lavamentivorans DS-1 exsB protein YP_001414411.1 3365387 D 402881 CDS YP_001414412.1 154253588 5453795 3366102..3366734 1 NC_009719.1 KEGG: hypothetical protein; hypothetical protein 3366734 5453795 Plav_3149 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414412.1 3366102 D 402881 CDS YP_001414413.1 154253589 5455194 3366734..3367102 1 NC_009719.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: xac:XAC3614 6-pyruvoyltetrahydropterin synthase; 6-pyruvoyl-tetrahydropterin synthase 3367102 5455194 Plav_3150 Parvibaculum lavamentivorans DS-1 6-pyruvoyl-tetrahydropterin synthase YP_001414413.1 3366734 D 402881 CDS YP_001414414.1 154253590 5455128 3367102..3367566 1 NC_009719.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 3367566 5455128 Plav_3151 Parvibaculum lavamentivorans DS-1 7-cyano-7-deazaguanine reductase YP_001414414.1 3367102 D 402881 CDS YP_001414415.1 154253591 5453637 3367636..3369042 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mag:amb3096 signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 3369042 5453637 Plav_3152 Parvibaculum lavamentivorans DS-1 integral membrane sensor signal transduction histidine kinase YP_001414415.1 3367636 D 402881 CDS YP_001414416.1 154253592 5454416 complement(3369089..3369745) 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; KEGG: mag:amb3096 signal transduction histidine kinase; histidine kinase 3369745 5454416 Plav_3153 Parvibaculum lavamentivorans DS-1 histidine kinase YP_001414416.1 3369089 R 402881 CDS YP_001414417.1 154253593 5453830 3369820..3370728 1 NC_009719.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: eli:ELI_14540 hypothetical protein; phytanoyl-CoA dioxygenase 3370728 5453830 Plav_3154 Parvibaculum lavamentivorans DS-1 phytanoyl-CoA dioxygenase YP_001414417.1 3369820 D 402881 CDS YP_001414418.1 154253594 5456896 complement(3370725..3371558) 1 NC_009719.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 3371558 5456896 Plav_3155 Parvibaculum lavamentivorans DS-1 2-dehydro-3-deoxyphosphooctonate aldolase YP_001414418.1 3370725 R 402881 CDS YP_001414419.1 154253595 5454501 complement(3371565..3373193) 1 NC_009719.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 3373193 pyrG 5454501 pyrG Parvibaculum lavamentivorans DS-1 CTP synthetase YP_001414419.1 3371565 R 402881 CDS YP_001414420.1 154253596 5453874 complement(3373303..3373737) 1 NC_009719.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: rru:Rru_A1888 preprotein translocase SecG subunit; preprotein translocase subunit SecG 3373737 5453874 Plav_3157 Parvibaculum lavamentivorans DS-1 preprotein translocase subunit SecG YP_001414420.1 3373303 R 402881 CDS YP_001414421.1 154253597 5453551 complement(3373976..3374167) 1 NC_009719.1 KEGG: bbt:BBta_4786 putative exported protein of unknown function; hypothetical protein 3374167 5453551 Plav_3158 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414421.1 3373976 R 402881 CDS YP_001414422.1 154253598 5455120 complement(3374171..3374341) 1 NC_009719.1 hypothetical protein 3374341 5455120 Plav_3159 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414422.1 3374171 R 402881 CDS YP_001414423.1 154253599 5453393 complement(3374374..3374601) 1 NC_009719.1 KEGG: bbt:BBta_6772 hypothetical protein; hypothetical protein 3374601 5453393 Plav_3160 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414423.1 3374374 R 402881 CDS YP_001414424.1 154253600 5454772 complement(3374651..3374860) 1 NC_009719.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bja:bsl3986 cold shock protein; cold-shock DNA-binding domain-containing protein 3374860 5454772 Plav_3161 Parvibaculum lavamentivorans DS-1 cold-shock DNA-binding domain-containing protein YP_001414424.1 3374651 R 402881 CDS YP_001414425.1 154253601 5453819 complement(3375089..3375991) 1 NC_009719.1 KEGG: rme:Rmet_3279 putative transmembrane transcriptional regulator (anti-sigma factor); putative transmembrane anti-sigma factor 3375991 5453819 Plav_3162 Parvibaculum lavamentivorans DS-1 putative transmembrane anti-sigma factor YP_001414425.1 3375089 R 402881 CDS YP_001414426.1 154253602 5454876 complement(3375988..3376536) 1 NC_009719.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mes:Meso_0146 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 3376536 5454876 Plav_3163 Parvibaculum lavamentivorans DS-1 ECF subfamily RNA polymerase sigma-24 factor YP_001414426.1 3375988 R 402881 CDS YP_001414427.1 154253603 5454526 3376725..3377132 1 NC_009719.1 KEGG: csa:Csal_1035 hypothetical protein; hypothetical protein 3377132 5454526 Plav_3164 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414427.1 3376725 D 402881 CDS YP_001414428.1 154253604 5453650 complement(3377247..3377777) 1 NC_009719.1 PFAM: protein of unknown function DUF1457; hypothetical protein 3377777 5453650 Plav_3165 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414428.1 3377247 R 402881 CDS YP_001414429.1 154253605 5454252 complement(3377858..3378610) 1 NC_009719.1 PFAM: triosephosphate isomerase; KEGG: nwi:Nwi_1835 triosephosphate isomerase; Triose-phosphate isomerase 3378610 5454252 Plav_3166 Parvibaculum lavamentivorans DS-1 Triose-phosphate isomerase YP_001414429.1 3377858 R 402881 CDS YP_001414430.1 154253606 5454636 3379273..3379617 1 NC_009719.1 hypothetical protein 3379617 5454636 Plav_3167 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414430.1 3379273 D 402881 CDS YP_001414431.1 154253607 5454659 3379794..3381689 1 NC_009719.1 KEGG: rpe:RPE_2592 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 3381689 5454659 Plav_3168 Parvibaculum lavamentivorans DS-1 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001414431.1 3379794 D 402881 CDS YP_001414432.1 154253608 5455164 3381686..3383194 1 NC_009719.1 TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: rru:Rru_A1891 anthranilate synthase component I; anthranilate synthase component I 3383194 5455164 Plav_3169 Parvibaculum lavamentivorans DS-1 anthranilate synthase component I YP_001414432.1 3381686 D 402881 CDS YP_001414433.1 154253609 5454137 complement(3383394..3384614) 1 NC_009719.1 PFAM: monooxygenase FAD-binding; KEGG: mxa:MXAN_6265 monooxygenase, FAD-dependent; hypothetical protein 3384614 5454137 Plav_3170 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414433.1 3383394 R 402881 CDS YP_001414434.1 154253610 5454247 3384721..3385314 1 NC_009719.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: sil:SPO2149 anthranilate synthase component II; glutamine amidotransferase of anthranilate synthase 3385314 5454247 Plav_3171 Parvibaculum lavamentivorans DS-1 glutamine amidotransferase of anthranilate synthase YP_001414434.1 3384721 D 402881 CDS YP_001414435.1 154253611 5454550 3385334..3386359 1 NC_009719.1 TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; KEGG: rru:Rru_A1896 anthranilate phosphoribosyl transferase; anthranilate phosphoribosyltransferase 3386359 5454550 Plav_3172 Parvibaculum lavamentivorans DS-1 anthranilate phosphoribosyltransferase YP_001414435.1 3385334 D 402881 CDS YP_001414436.1 154253612 5453525 3386352..3387149 1 NC_009719.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: rpb:RPB_2798 indole-3-glycerol-phosphate synthase; Indole-3-glycerol phosphate synthase 3387149 5453525 Plav_3173 Parvibaculum lavamentivorans DS-1 Indole-3-glycerol phosphate synthase YP_001414436.1 3386352 D 402881 CDS YP_001414437.1 154253613 5453880 3387313..3387822 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sen:SACE_0922 acetyltransferase, GNAT family; N-acetyltransferase GCN5 3387822 5453880 Plav_3174 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001414437.1 3387313 D 402881 CDS YP_001414438.1 154253614 5453700 3387826..3388674 1 NC_009719.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 3388674 5453700 Plav_3175 Parvibaculum lavamentivorans DS-1 2-dehydro-3-deoxyphosphooctonate aldolase YP_001414438.1 3387826 D 402881 CDS YP_001414439.1 154253615 5454376 3388720..3389202 1 NC_009719.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: bbt:BBta_4484 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C 3389202 5454376 Plav_3176 Parvibaculum lavamentivorans DS-1 molybdenum cofactor biosynthesis protein C YP_001414439.1 3388720 D 402881 CDS YP_001414440.1 154253616 5453423 3389206..3390417 1 NC_009719.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mag:amb2865 molybdopterin biosynthesis enzyme; molybdenum cofactor synthesis domain-containing protein 3390417 5453423 Plav_3177 Parvibaculum lavamentivorans DS-1 molybdenum cofactor synthesis domain-containing protein YP_001414440.1 3389206 D 402881 CDS YP_001414441.1 154253617 5454505 3390537..3391250 1 NC_009719.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 3391250 5454505 Plav_3178 Parvibaculum lavamentivorans DS-1 LexA repressor YP_001414441.1 3390537 D 402881 CDS YP_001414442.1 154253618 5453347 complement(3391244..3393400) 1 NC_009719.1 PFAM: ComEC/Rec2-related protein; KEGG: rru:Rru_A1602 ComEC/Rec2-related protein; ComEC/Rec2-like protein 3393400 5453347 Plav_3179 Parvibaculum lavamentivorans DS-1 ComEC/Rec2-like protein YP_001414442.1 3391244 R 402881 CDS YP_001414443.1 154253619 5454198 3393593..3395065 1 NC_009719.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: bme:BMEI0837 glutamyl-tRNA synthetase; glutamyl-tRNA synthetase 3395065 5454198 Plav_3180 Parvibaculum lavamentivorans DS-1 glutamyl-tRNA synthetase YP_001414443.1 3393593 D 402881 CDS YP_001414444.1 154253620 5456905 3395177..3396493 1 NC_009719.1 TIGRFAM: citrate synthase I; PFAM: Citrate synthase; KEGG: bov:BOV_1106 citrate (Si)-synthase; citrate synthase I 3396493 5456905 Plav_3181 Parvibaculum lavamentivorans DS-1 citrate synthase I YP_001414444.1 3395177 D 402881 CDS YP_001414445.1 154253621 5455005 complement(3396548..3397702) 1 NC_009719.1 TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; KEGG: rpe:RPE_2566 lipid-A-disaccharide synthase; lipid-A-disaccharide synthase 3397702 5455005 Plav_3182 Parvibaculum lavamentivorans DS-1 lipid-A-disaccharide synthase YP_001414445.1 3396548 R 402881 CDS YP_001414446.1 154253622 5454613 complement(3397732..3398607) 1 NC_009719.1 PFAM: protein of unknown function DUF1009; KEGG: hne:HNE_1780 hypothetical protein; hypothetical protein 3398607 5454613 Plav_3183 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414446.1 3397732 R 402881 CDS YP_001414447.1 154253623 5453784 complement(3398619..3399419) 1 NC_009719.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 3399419 5453784 Plav_3184 Parvibaculum lavamentivorans DS-1 UDP-N-acetylglucosamine acyltransferase YP_001414447.1 3398619 R 402881 CDS YP_001414448.1 154253624 5455172 complement(3399416..3399892) 1 NC_009719.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: sme:SMc02092 probable 3R-hydroxymyristoyl-acyl carrier protein dehydratase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 3399892 5455172 Plav_3185 Parvibaculum lavamentivorans DS-1 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YP_001414448.1 3399416 R 402881 CDS YP_001414449.1 154253625 5454986 complement(3399927..3400988) 1 NC_009719.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 3400988 lpxD 5454986 lpxD Parvibaculum lavamentivorans DS-1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_001414449.1 3399927 R 402881 CDS YP_001414450.1 154253626 5454722 complement(3401036..3401629) 1 NC_009719.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: rde:RD1_2594 hypothetical protein; outer membrane chaperone Skp 3401629 5454722 Plav_3187 Parvibaculum lavamentivorans DS-1 outer membrane chaperone Skp YP_001414450.1 3401036 R 402881 CDS YP_001414451.1 154253627 5453573 complement(3401677..3404061) 1 NC_009719.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: mmr:Mmar10_1388 surface antigen (D15); surface antigen (D15) 3404061 5453573 Plav_3188 Parvibaculum lavamentivorans DS-1 surface antigen (D15) YP_001414451.1 3401677 R 402881 CDS YP_001414452.1 154253628 5454396 complement(3404149..3405327) 1 NC_009719.1 TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: rpe:RPE_2560 putative membrane-associated zinc metalloprotease; putative membrane-associated zinc metalloprotease 3405327 5454396 Plav_3189 Parvibaculum lavamentivorans DS-1 putative membrane-associated zinc metalloprotease YP_001414452.1 3404149 R 402881 CDS YP_001414453.1 154253629 5454199 complement(3405454..3406683) 1 NC_009719.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3406683 5454199 Plav_3190 Parvibaculum lavamentivorans DS-1 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_001414453.1 3405454 R 402881 CDS YP_001414454.1 154253630 5453597 complement(3406674..3407537) 1 NC_009719.1 PFAM: phosphatidate cytidylyltransferase; KEGG: mag:amb2493 CDP-diglyceride synthetase; phosphatidate cytidylyltransferase 3407537 5453597 Plav_3191 Parvibaculum lavamentivorans DS-1 phosphatidate cytidylyltransferase YP_001414454.1 3406674 R 402881 CDS YP_001414455.1 154253631 5455086 complement(3407542..3408306) 1 NC_009719.1 TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: rpe:RPE_2557 undecaprenyl diphosphate synthase; undecaprenyl diphosphate synthase 3408306 5455086 Plav_3192 Parvibaculum lavamentivorans DS-1 undecaprenyl diphosphate synthase YP_001414455.1 3407542 R 402881 CDS YP_001414456.1 154253632 5454626 complement(3408375..3408938) 1 NC_009719.1 PFAM: ribosome recycling factor; KEGG: bov:BOV_1116 ribosome recycling factor; ribosome recycling factor 3408938 5454626 Plav_3193 Parvibaculum lavamentivorans DS-1 ribosome recycling factor YP_001414456.1 3408375 R 402881 CDS YP_001414457.1 154253633 5454476 complement(3408969..3409694) 1 NC_009719.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 3409694 pyrH 5454476 pyrH Parvibaculum lavamentivorans DS-1 uridylate kinase YP_001414457.1 3408969 R 402881 CDS YP_001414458.1 154253634 5455104 complement(3409837..3410763) 1 NC_009719.1 TIGRFAM: translation elongation factor Ts; PFAM: ubiquitin-associated- domain-containing protein; Translation elongation factor EFTs/EF1B dimerisation; KEGG: rle:RL2222 putative elongation factor Ts (EF-Ts); translation elongation factor Ts 3410763 5455104 Plav_3195 Parvibaculum lavamentivorans DS-1 translation elongation factor Ts YP_001414458.1 3409837 R 402881 CDS YP_001414459.1 154253635 5453848 complement(3410859..3411620) 1 NC_009719.1 PFAM: ribosomal protein S2; KEGG: mlo:mll0651 30S ribosomal protein S2; 30S ribosomal protein S2 3411620 5453848 Plav_3196 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S2 YP_001414459.1 3410859 R 402881 CDS YP_001414460.1 154253636 5454467 complement(3411842..3415261) 1 NC_009719.1 KEGG: bja:bll4866 DNA polymerase III alpha chain; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 3415261 5454467 Plav_3197 Parvibaculum lavamentivorans DS-1 DNA polymerase III subunit alpha YP_001414460.1 3411842 R 402881 CDS YP_001414461.1 154253637 5454450 complement(3415542..3416714) 1 NC_009719.1 PFAM: protein of unknown function DUF262; KEGG: aba:Acid345_4280 hypothetical protein; hypothetical protein 3416714 5454450 Plav_3198 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414461.1 3415542 R 402881 CDS YP_001414462.1 154253638 5453645 complement(3416813..3416947) 1 NC_009719.1 hypothetical protein 3416947 5453645 Plav_3199 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414462.1 3416813 R 402881 CDS YP_001414463.1 154253639 5454770 3417101..3417631 1 NC_009719.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: ret:RHE_CH00295 putative reductase protein; deaminase-reductase domain-containing protein 3417631 5454770 Plav_3200 Parvibaculum lavamentivorans DS-1 deaminase-reductase domain-containing protein YP_001414463.1 3417101 D 402881 CDS YP_001414464.1 154253640 5455103 3417770..3418312 1 NC_009719.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: pol:Bpro_1366 hypothetical protein; activator of Hsp90 ATPase 1 family protein 3418312 5455103 Plav_3201 Parvibaculum lavamentivorans DS-1 activator of Hsp90 ATPase 1 family protein YP_001414464.1 3417770 D 402881 CDS YP_001414465.1 154253641 5453677 complement(3418380..3418637) 1 NC_009719.1 hypothetical protein 3418637 5453677 Plav_3202 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414465.1 3418380 R 402881 CDS YP_001414466.1 154253642 5454493 complement(3418697..3419425) 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb2571 ABC-type antimicrobial peptide transport system, ATPase component; ABC transporter-like protein 3419425 5454493 Plav_3203 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001414466.1 3418697 R 402881 CDS YP_001414467.1 154253643 5454779 complement(3419418..3420701) 1 NC_009719.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: nha:Nham_2196 lipoprotein releasing system, transmembrane protein, LolC/E family; LolC/E family lipoprotein releasing system, transmembrane protein 3420701 5454779 Plav_3204 Parvibaculum lavamentivorans DS-1 LolC/E family lipoprotein releasing system, transmembrane protein YP_001414467.1 3419418 R 402881 CDS YP_001414468.1 154253644 5454557 complement(3420724..3422043) 1 NC_009719.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 3422043 5454557 Plav_3205 Parvibaculum lavamentivorans DS-1 prolyl-tRNA synthetase YP_001414468.1 3420724 R 402881 CDS YP_001414469.1 154253645 5454707 complement(3422136..3423836) 1 NC_009719.1 KEGG: bba:Bd1177 hypothetical protein; hypothetical protein 3423836 5454707 Plav_3206 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414469.1 3422136 R 402881 CDS YP_001414470.1 154253646 5454393 complement(3423914..3424345) 1 NC_009719.1 hypothetical protein 3424345 5454393 Plav_3207 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414470.1 3423914 R 402881 CDS YP_001414471.1 154253647 5455080 3424432..3425742 1 NC_009719.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: maq:Maqu_2813 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 3425742 5455080 Plav_3208 Parvibaculum lavamentivorans DS-1 xanthine/uracil/vitamin C permease YP_001414471.1 3424432 D 402881 CDS YP_001414472.1 154253648 5453545 complement(3426254..3426532) 1 NC_009719.1 PFAM: protein of unknown function DUF1467; KEGG: nha:Nham_2203 protein of unknown function DUF1467; hypothetical protein 3426532 5453545 Plav_3209 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414472.1 3426254 R 402881 CDS YP_001414473.1 154253649 5453900 complement(3426565..3426969) 1 NC_009719.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mag:amb2575 lactoylglutathione lyase and related lyase; methylmalonyl-CoA epimerase 3426969 5453900 Plav_3210 Parvibaculum lavamentivorans DS-1 methylmalonyl-CoA epimerase YP_001414473.1 3426565 R 402881 CDS YP_001414474.1 154253650 5455085 complement(3427051..3428754) 1 NC_009719.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: mmr:Mmar10_1371 beta-lactamase domain protein; beta-lactamase domain-containing protein 3428754 5455085 Plav_3211 Parvibaculum lavamentivorans DS-1 beta-lactamase domain-containing protein YP_001414474.1 3427051 R 402881 CDS YP_001414475.1 154253651 5454994 complement(3428764..3429522) 1 NC_009719.1 TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: biotin protein ligase; biotin--acetyl-CoA-carboxylase ligase 3429522 5454994 Plav_3212 Parvibaculum lavamentivorans DS-1 biotin--acetyl-CoA-carboxylase ligase YP_001414475.1 3428764 R 402881 CDS YP_001414476.1 154253652 5454765 complement(3429530..3430981) 1 NC_009719.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: bov:BOV_0810 NADH dehydrogenase I, N subunit; proton-translocating NADH-quinone oxidoreductase subunit N 3430981 5454765 Plav_3213 Parvibaculum lavamentivorans DS-1 proton-translocating NADH-quinone oxidoreductase subunit N YP_001414476.1 3429530 R 402881 CDS YP_001414477.1 154253653 5454633 complement(3431006..3432550) 1 NC_009719.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: mlo:mll1354 NADH dehydrogenase I chain M; proton-translocating NADH-quinone oxidoreductase subunit M 3432550 5454633 Plav_3214 Parvibaculum lavamentivorans DS-1 proton-translocating NADH-quinone oxidoreductase subunit M YP_001414477.1 3431006 R 402881 CDS YP_001414478.1 154253654 5453653 complement(3432550..3434481) 1 NC_009719.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); KEGG: mlo:mll1355 NADH dehydrogenase I chain L; proton-translocating NADH-quinone oxidoreductase subunit L 3434481 5453653 Plav_3215 Parvibaculum lavamentivorans DS-1 proton-translocating NADH-quinone oxidoreductase subunit L YP_001414478.1 3432550 R 402881 CDS YP_001414479.1 154253655 5453511 complement(3434487..3434795) 1 NC_009719.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: mlo:mll1357 NADH dehydrogenase I chain K; NADH-ubiquinone oxidoreductase chain 4L 3434795 5453511 Plav_3216 Parvibaculum lavamentivorans DS-1 NADH-ubiquinone oxidoreductase chain 4L YP_001414479.1 3434487 R 402881 CDS YP_001414480.1 154253656 5454155 complement(3434899..3435513) 1 NC_009719.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: mes:Meso_1031 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 3435513 5454155 Plav_3217 Parvibaculum lavamentivorans DS-1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_001414480.1 3434899 R 402881 CDS YP_001414481.1 154253657 5454321 complement(3435534..3436025) 1 NC_009719.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 3436025 5454321 Plav_3218 Parvibaculum lavamentivorans DS-1 NADH dehydrogenase subunit I YP_001414481.1 3435534 R 402881 CDS YP_001414482.1 154253658 5454164 complement(3436066..3437079) 1 NC_009719.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 3437079 5454164 Plav_3219 Parvibaculum lavamentivorans DS-1 NADH dehydrogenase subunit H YP_001414482.1 3436066 R 402881 CDS YP_001414483.1 154253659 5454103 complement(3437090..3439132) 1 NC_009719.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 3439132 5454103 Plav_3220 Parvibaculum lavamentivorans DS-1 NADH dehydrogenase subunit G YP_001414483.1 3437090 R 402881 CDS YP_001414484.1 154253660 5453659 complement(3439138..3440427) 1 NC_009719.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 3440427 5453659 Plav_3221 Parvibaculum lavamentivorans DS-1 NADH dehydrogenase I subunit F YP_001414484.1 3439138 R 402881 CDS YP_001414485.1 154253661 5454002 complement(3440427..3441053) 1 NC_009719.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: bbt:BBta_4558 NADH-quinone oxidoreductase chain E; NADH-quinone oxidoreductase subunit E 3441053 5454002 Plav_3222 Parvibaculum lavamentivorans DS-1 NADH-quinone oxidoreductase subunit E YP_001414485.1 3440427 R 402881 CDS YP_001414486.1 154253662 5453987 complement(3441050..3442228) 1 NC_009719.1 TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: bbt:BBta_4560 NADH-quinone oxidoreductase chain D; NADH dehydrogenase I subunit D 3442228 5453987 Plav_3223 Parvibaculum lavamentivorans DS-1 NADH dehydrogenase I subunit D YP_001414486.1 3441050 R 402881 CDS YP_001414487.1 154253663 5454001 complement(3442232..3442834) 1 NC_009719.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 3442834 5454001 Plav_3224 Parvibaculum lavamentivorans DS-1 NADH dehydrogenase subunit C YP_001414487.1 3442232 R 402881 CDS YP_001414488.1 154253664 5453450 complement(3442905..3443480) 1 NC_009719.1 TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: ret:RHE_CH01603 NADH-ubiquinone oxidoreductase chain B protein; NADH-quinone oxidoreductase subunit B 3443480 5453450 Plav_3225 Parvibaculum lavamentivorans DS-1 NADH-quinone oxidoreductase subunit B YP_001414488.1 3442905 R 402881 CDS YP_001414489.1 154253665 5453721 complement(3443471..3443836) 1 NC_009719.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: mes:Meso_1022 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 3443836 5453721 Plav_3226 Parvibaculum lavamentivorans DS-1 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_001414489.1 3443471 R 402881 CDS YP_001414490.1 154253666 5455093 3444535..3445818 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: nha:Nham_2864 twin-arginine translocation pathway signal; major facilitator superfamily transporter 3445818 5455093 Plav_3228 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001414490.1 3444535 D 402881 CDS YP_001414491.1 154253667 5453479 complement(3445897..3446172) 1 NC_009719.1 PFAM: histone family protein DNA-binding protein; KEGG: rru:Rru_A1553 histone-like DNA-binding protein; histone family DNA-binding protein 3446172 5453479 Plav_3229 Parvibaculum lavamentivorans DS-1 histone family DNA-binding protein YP_001414491.1 3445897 R 402881 CDS YP_001414492.1 154253668 5454516 complement(3446359..3448815) 1 NC_009719.1 KEGG: bme:BMEI0876 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 3448815 5454516 Plav_3230 Parvibaculum lavamentivorans DS-1 ATP-dependent protease La YP_001414492.1 3446359 R 402881 CDS YP_001414493.1 154253669 5455069 complement(3449102..3450367) 1 NC_009719.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 3450367 clpX 5455069 clpX Parvibaculum lavamentivorans DS-1 ATP-dependent protease ATP-binding subunit ClpX YP_001414493.1 3449102 R 402881 CDS YP_001414494.1 154253670 5454063 complement(3450688..3451329) 1 NC_009719.1 PFAM: peptidase S14 ClpP; KEGG: rpa:RPA2961 ATP-dependent Clp protease proteolytic subunit; endopeptidase Clp 3451329 5454063 Plav_3232 Parvibaculum lavamentivorans DS-1 endopeptidase Clp YP_001414494.1 3450688 R 402881 CDS YP_001414495.1 154253671 5453932 complement(3451544..3452110) 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bms:BR1560 acetyltransferase, GNAT family; N-acetyltransferase GCN5 3452110 5453932 Plav_3233 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001414495.1 3451544 R 402881 CDS YP_001414496.1 154253672 5456678 complement(3452164..3453465) 1 NC_009719.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mag:amb1388 diaminopimelate decarboxylase; Orn/DAP/Arg decarboxylase 2 3453465 5456678 Plav_3234 Parvibaculum lavamentivorans DS-1 Orn/DAP/Arg decarboxylase 2 YP_001414496.1 3452164 R 402881 CDS YP_001414497.1 154253673 5453523 complement(3453756..3455294) 1 NC_009719.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 3455294 tig 5453523 tig Parvibaculum lavamentivorans DS-1 trigger factor YP_001414497.1 3453756 R 402881 CDS YP_001414498.1 154253674 5454739 complement(3455535..3457067) 1 NC_009719.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: rpa:RPA2965 hypothetical protein; carbohydrate kinase 3457067 5454739 Plav_3236 Parvibaculum lavamentivorans DS-1 carbohydrate kinase YP_001414498.1 3455535 R 402881 CDS YP_001414499.1 154253675 5455708 complement(3457100..3457681) 1 NC_009719.1 PFAM: Phosphoglycerate mutase; KEGG: hne:HNE_2081 phosphoglycerate mutase family protein; phosphoglycerate mutase 3457681 5455708 Plav_3237 Parvibaculum lavamentivorans DS-1 phosphoglycerate mutase YP_001414499.1 3457100 R 402881 CDS YP_001414500.1 154253676 5455723 3457809..3458171 1 NC_009719.1 KEGG: aeh:Mlg_2138 hypothetical protein; hypothetical protein 3458171 5455723 Plav_3238 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414500.1 3457809 D 402881 CDS YP_001414501.1 154253677 5455999 complement(3458229..3458774) 1 NC_009719.1 KEGG: ret:RHE_CH02285 hypothetical protein; hypothetical protein 3458774 5455999 Plav_3239 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414501.1 3458229 R 402881 CDS YP_001414502.1 154253678 5456551 complement(3458985..3460538) 1 NC_009719.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 3460538 5456551 Plav_3240 Parvibaculum lavamentivorans DS-1 acetyl-CoA acetyltransferase YP_001414502.1 3458985 R 402881 CDS YP_001414503.1 154253679 5454706 complement(3460648..3461316) 1 NC_009719.1 PFAM: phospholipase/Carboxylesterase; KEGG: rsh:Rsph17029_1386 phospholipase/carboxylesterase; phospholipase/carboxylesterase 3461316 5454706 Plav_3241 Parvibaculum lavamentivorans DS-1 phospholipase/carboxylesterase YP_001414503.1 3460648 R 402881 CDS YP_001414504.1 154253680 5455479 complement(3461313..3462491) 1 NC_009719.1 PFAM: aminotransferase class I and II; KEGG: acr:Acry_3059 aminotransferase, class I and II; class I/II aminotransferase 3462491 5455479 Plav_3242 Parvibaculum lavamentivorans DS-1 class I/II aminotransferase YP_001414504.1 3461313 R 402881 CDS YP_001414505.1 154253681 5456065 3462816..3463154 1 NC_009719.1 PFAM: nitrogen regulatory protein P-II; KEGG: mes:Meso_1545 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 3463154 5456065 Plav_3243 Parvibaculum lavamentivorans DS-1 nitrogen regulatory protein P-II YP_001414505.1 3462816 D 402881 CDS YP_001414506.1 154253682 5456377 3463280..3464686 1 NC_009719.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: sme:SMc00948 glutamine synthetase I protein; glutamine synthetase 3464686 5456377 Plav_3244 Parvibaculum lavamentivorans DS-1 glutamine synthetase YP_001414506.1 3463280 D 402881 CDS YP_001414507.1 154253683 5456654 3465305..3465856 1 NC_009719.1 KEGG: lpn:lpg1213 hypothetical protein; hypothetical protein 3465856 5456654 Plav_3245 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414507.1 3465305 D 402881 CDS YP_001414508.1 154253684 5456751 complement(3465851..3467371) 1 NC_009719.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: psa:PST_2511 di- and tricarboxylate transporter; anion transporter 3467371 5456751 Plav_3246 Parvibaculum lavamentivorans DS-1 anion transporter YP_001414508.1 3465851 R 402881 CDS YP_001414509.1 154253685 5456487 complement(3467386..3468693) 1 NC_009719.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: hch:HCH_01469 NADH:flavin oxidoreductase, Old Yellow enzyme family; NADH:flavin oxidoreductase 3468693 5456487 Plav_3247 Parvibaculum lavamentivorans DS-1 NADH:flavin oxidoreductase YP_001414509.1 3467386 R 402881 CDS YP_001414510.1 154253686 5455899 3468828..3469484 1 NC_009719.1 PFAM: Protein of unknown function YqcI/YcgG; KEGG: rru:Rru_A3044 hypothetical protein; hypothetical protein 3469484 5455899 Plav_3248 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414510.1 3468828 D 402881 CDS YP_001414511.1 154253687 5455726 3469460..3470080 1 NC_009719.1 KEGG: rru:Rru_A3045 hypothetical protein; hypothetical protein 3470080 5455726 Plav_3249 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414511.1 3469460 D 402881 CDS YP_001414512.1 154253688 5456966 3470183..3472222 1 NC_009719.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 3472222 5456966 Plav_3250 Parvibaculum lavamentivorans DS-1 DNA topoisomerase IV subunit B YP_001414512.1 3470183 D 402881 CDS YP_001414513.1 154253689 5456718 complement(3472219..3473352) 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rru:Rru_A3213 PAS/PAC sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 3473352 5456718 Plav_3251 Parvibaculum lavamentivorans DS-1 integral membrane sensor signal transduction histidine kinase YP_001414513.1 3472219 R 402881 CDS YP_001414514.1 154253690 5454362 3473701..3475215 1 NC_009719.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: rsh:Rsph17029_1195 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 3475215 5454362 Plav_3252 Parvibaculum lavamentivorans DS-1 DEAD/DEAH box helicase YP_001414514.1 3473701 D 402881 CDS YP_001414515.1 154253691 5455798 complement(3475284..3476747) 1 NC_009719.1 PFAM: aldehyde dehydrogenase; KEGG: probable coniferyl aldehyde dehydrogenase; aldehyde dehydrogenase 3476747 5455798 Plav_3253 Parvibaculum lavamentivorans DS-1 aldehyde dehydrogenase YP_001414515.1 3475284 R 402881 CDS YP_001414516.1 154253692 5456016 3477067..3478122 1 NC_009719.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mmr:Mmar10_1323 diguanylate cyclase; diguanylate cyclase 3478122 5456016 Plav_3254 Parvibaculum lavamentivorans DS-1 diguanylate cyclase YP_001414516.1 3477067 D 402881 CDS YP_001414517.1 154253693 5456183 3478268..3479059 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: azo:azo0300 probable enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 3479059 5456183 Plav_3255 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001414517.1 3478268 D 402881 CDS YP_001414518.1 154253694 5454086 3479096..3479887 1 NC_009719.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3479887 5454086 Plav_3256 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase YP_001414518.1 3479096 D 402881 CDS YP_001414519.1 154253695 5454639 complement(3480074..3480433) 1 NC_009719.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: nwi:Nwi_1659 HesB/YadR/YfhF; iron-sulfur cluster assembly accessory protein 3480433 5454639 Plav_3257 Parvibaculum lavamentivorans DS-1 iron-sulfur cluster assembly accessory protein YP_001414519.1 3480074 R 402881 CDS YP_001414520.1 154253696 5454107 complement(3480445..3480837) 1 NC_009719.1 TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59; KEGG: mlo:mlr0023 hypothetical protein; FeS assembly SUF system protein 3480837 5454107 Plav_3258 Parvibaculum lavamentivorans DS-1 FeS assembly SUF system protein YP_001414520.1 3480445 R 402881 CDS YP_001414521.1 154253697 5455053 complement(3480848..3482092) 1 NC_009719.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mes:Meso_1778 cysteine desulfurases, SufS subfamily; SufS subfamily cysteine desulfurase 3482092 5455053 Plav_3259 Parvibaculum lavamentivorans DS-1 SufS subfamily cysteine desulfurase YP_001414521.1 3480848 R 402881 CDS YP_001414522.1 154253698 5454323 complement(3482089..3483402) 1 NC_009719.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: nwi:Nwi_1662 FeS assembly protein SufD; FeS assembly protein SufD 3483402 5454323 Plav_3260 Parvibaculum lavamentivorans DS-1 FeS assembly protein SufD YP_001414522.1 3482089 R 402881 CDS YP_001414523.1 154253699 5453909 complement(3483411..3484160) 1 NC_009719.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0437 Suf C, ATPase; FeS assembly ATPase SufC 3484160 5453909 Plav_3261 Parvibaculum lavamentivorans DS-1 FeS assembly ATPase SufC YP_001414523.1 3483411 R 402881 CDS YP_001414524.1 154253700 5456908 complement(3484185..3485633) 1 NC_009719.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: bbt:BBta_3966 transport protein associated with Fe-S cluster assembly, SufB; FeS assembly protein SufB 3485633 5456908 Plav_3262 Parvibaculum lavamentivorans DS-1 FeS assembly protein SufB YP_001414524.1 3484185 R 402881 CDS YP_001414525.1 154253701 5455603 complement(3485635..3486837) 1 NC_009719.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mag:amb3029 cysteine sulfinate desulfinase/cysteine desulfurase and related enzyme; class V aminotransferase 3486837 5455603 Plav_3263 Parvibaculum lavamentivorans DS-1 class V aminotransferase YP_001414525.1 3485635 R 402881 CDS YP_001414526.1 154253702 5455288 complement(3486875..3487369) 1 NC_009719.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rru:Rru_A2028 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 3487369 5455288 Plav_3264 Parvibaculum lavamentivorans DS-1 BadM/Rrf2 family transcriptional regulator YP_001414526.1 3486875 R 402881 CDS YP_001414527.1 154253703 5456045 3487663..3488319 1 NC_009719.1 KEGG: rpe:RPE_2970 hypothetical protein; hypothetical protein 3488319 5456045 Plav_3265 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414527.1 3487663 D 402881 CDS YP_001414528.1 154253704 5457015 complement(3488320..3489438) 1 NC_009719.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 3489438 anmK 5457015 anmK Parvibaculum lavamentivorans DS-1 anhydro-N-acetylmuramic acid kinase YP_001414528.1 3488320 R 402881 CDS YP_001414529.1 154253705 5456290 3489522..3490772 1 NC_009719.1 TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; KEGG: ret:RHE_CH02258 tyrosyl-tRNA synthetase protein; tyrosyl-tRNA synthetase 3490772 5456290 Plav_3267 Parvibaculum lavamentivorans DS-1 tyrosyl-tRNA synthetase YP_001414529.1 3489522 D 402881 CDS YP_001414530.1 154253706 5455793 complement(3490894..3492030) 1 NC_009719.1 KEGG: abo:ABO_1416 hypothetical protein; hypothetical protein 3492030 5455793 Plav_3268 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414530.1 3490894 R 402881 CDS YP_001414531.1 154253707 5456095 complement(3492120..3495629) 1 NC_009719.1 KEGG: mag:amb2682 hypothetical protein; hypothetical protein 3495629 5456095 Plav_3269 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414531.1 3492120 R 402881 CDS YP_001414532.1 154253708 5454842 3495827..3496333 1 NC_009719.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bbt:BBta_3956 hypothetical protein; alkyl hydroperoxide reductase 3496333 5454842 Plav_3270 Parvibaculum lavamentivorans DS-1 alkyl hydroperoxide reductase YP_001414532.1 3495827 D 402881 CDS YP_001414533.1 154253709 5454605 3496337..3497152 1 NC_009719.1 PFAM: protein of unknown function DUF455; KEGG: sal:Sala_2183 protein of unknown function DUF455; hypothetical protein 3497152 5454605 Plav_3271 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414533.1 3496337 D 402881 CDS YP_001414534.1 154253710 5454120 3497284..3498663 1 NC_009719.1 PFAM: peptidase M23B; KEGG: mmr:Mmar10_1304 peptidase M23B; peptidase M23B 3498663 5454120 Plav_3272 Parvibaculum lavamentivorans DS-1 peptidase M23B YP_001414534.1 3497284 D 402881 CDS YP_001414535.1 154253711 5454867 3498641..3499234 1 NC_009719.1 PFAM: protein of unknown function DUF583; KEGG: mmr:Mmar10_1303 protein of unknown function DUF583; hypothetical protein 3499234 5454867 Plav_3273 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414535.1 3498641 D 402881 CDS YP_001414536.1 154253712 5454577 complement(3499679..3500869) 1 NC_009719.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: hypothetical protein; hypothetical protein 3500869 5454577 Plav_3274 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414536.1 3499679 R 402881 CDS YP_001414537.1 154253713 5455018 complement(3501176..3502144) 1 NC_009719.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: atc:AGR_C_2479 peptide chain release factor RF-2; peptide chain release factor 2 3502144 5455018 Plav_3275 Parvibaculum lavamentivorans DS-1 peptide chain release factor 2 YP_001414537.1 3501176 R 402881 CDS YP_001414538.1 154253714 5453923 complement(3502668..3505394) 1 NC_009719.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bme:BMEI1055 penicillin-binding protein 1A; 1A family penicillin-binding protein 3505394 5453923 Plav_3276 Parvibaculum lavamentivorans DS-1 1A family penicillin-binding protein YP_001414538.1 3502668 R 402881 CDS YP_001414539.1 154253715 5453685 complement(3505612..3507066) 1 NC_009719.1 PFAM: cell wall hydrolase/autolysin; KEGG: rpe:RPE_2978 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 3507066 5453685 Plav_3277 Parvibaculum lavamentivorans DS-1 N-acetylmuramoyl-L-alanine amidase YP_001414539.1 3505612 R 402881 CDS YP_001414540.1 154253716 5454497 3507917..3510508 1 NC_009719.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: sme:SMc01336 probable ribonuclease E protein; ribonuclease 3510508 5454497 Plav_3278 Parvibaculum lavamentivorans DS-1 ribonuclease YP_001414540.1 3507917 D 402881 CDS YP_001414541.1 154253717 5453755 complement(3510589..3512100) 1 NC_009719.1 PFAM: gamma-glutamyltranspeptidase; KEGG: acr:Acry_1628 gamma-glutamyltranspeptidase; gamma-glutamyltranspeptidase 3512100 5453755 Plav_3279 Parvibaculum lavamentivorans DS-1 gamma-glutamyltranspeptidase YP_001414541.1 3510589 R 402881 CDS YP_001414542.1 154253718 5455217 3512324..3513682 1 NC_009719.1 PFAM: TPR repeat-containing protein; peptidase M48 Ste24p; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:bll4295 hypothetical protein; peptidase M48 Ste24p 3513682 5455217 Plav_3280 Parvibaculum lavamentivorans DS-1 peptidase M48 Ste24p YP_001414542.1 3512324 D 402881 CDS YP_001414543.1 154253719 5455224 3513721..3514512 1 NC_009719.1 PFAM: DSBA oxidoreductase; KEGG: mag:amb1392 protein-disulfide isomerase; DSBA oxidoreductase 3514512 5455224 Plav_3281 Parvibaculum lavamentivorans DS-1 DSBA oxidoreductase YP_001414543.1 3513721 D 402881 CDS YP_001414544.1 154253720 5454878 3514574..3515560 1 NC_009719.1 PFAM: fatty acid desaturase; KEGG: nha:Nham_2541 fatty acid desaturase; fatty acid desaturase 3515560 5454878 Plav_3282 Parvibaculum lavamentivorans DS-1 fatty acid desaturase YP_001414544.1 3514574 D 402881 CDS YP_001414545.1 154253721 5455347 3515647..3516678 1 NC_009719.1 PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: bbr:BB1929 fructose-1,6-bisphosphatase; inositol phosphatase/fructose-16-bisphosphatase 3516678 5455347 Plav_3283 Parvibaculum lavamentivorans DS-1 inositol phosphatase/fructose-16-bisphosphatase YP_001414545.1 3515647 D 402881 CDS YP_001414546.1 154253722 5454057 complement(3516691..3517986) 1 NC_009719.1 KEGG: ppu:PP_3329 hypothetical protein; hypothetical protein 3517986 5454057 Plav_3284 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414546.1 3516691 R 402881 CDS YP_001414547.1 154253723 5455435 complement(3517983..3518465) 1 NC_009719.1 KEGG: rsq:Rsph17025_2827 membrane protein-like protein; membrane protein 3518465 5455435 Plav_3285 Parvibaculum lavamentivorans DS-1 membrane protein YP_001414547.1 3517983 R 402881 CDS YP_001414548.1 154253724 5455573 3518642..3519178 1 NC_009719.1 KEGG: pau:PA14_36930 hypothetical protein; hypothetical protein 3519178 5455573 Plav_3286 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414548.1 3518642 D 402881 CDS YP_001414549.1 154253725 5455660 3519188..3519637 1 NC_009719.1 KEGG: psb:Psyr_0769 conserved hypothetical membrane-anchored protein; hypothetical protein 3519637 5455660 Plav_3287 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414549.1 3519188 D 402881 CDS YP_001414550.1 154253726 5455827 complement(3519650..3520462) 1 NC_009719.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 3520462 thiG 5455827 thiG Parvibaculum lavamentivorans DS-1 thiazole synthase YP_001414550.1 3519650 R 402881 CDS YP_001414551.1 154253727 5455856 complement(3520488..3520688) 1 NC_009719.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: thiamin biosynthesis ThiS; K03154 thiamine biosynthesis ThiS; thiamine biosynthesis protein ThiS 3520688 5455856 Plav_3289 Parvibaculum lavamentivorans DS-1 thiamine biosynthesis protein ThiS YP_001414551.1 3520488 R 402881 CDS YP_001414552.1 154253728 5456167 3520964..3521422 1 NC_009719.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 3521422 5456167 Plav_3290 Parvibaculum lavamentivorans DS-1 3-dehydroquinate dehydratase YP_001414552.1 3520964 D 402881 CDS YP_001414553.1 154253729 5456279 3521439..3521948 1 NC_009719.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: rpd:RPD_2432 acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 3521948 5456279 Plav_3291 Parvibaculum lavamentivorans DS-1 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_001414553.1 3521439 D 402881 CDS YP_001414554.1 154253730 5455539 3521965..3523308 1 NC_009719.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mlo:mll0203 biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase 3523308 5455539 Plav_3292 Parvibaculum lavamentivorans DS-1 acetyl-CoA carboxylase, biotin carboxylase YP_001414554.1 3521965 D 402881 CDS YP_001414555.1 154253731 5456625 3523350..3525320 1 NC_009719.1 PFAM: AsmA family protein; KEGG: gbe:GbCGDNIH1_0797 AsmA family protein; AsmA family protein 3525320 5456625 Plav_3293 Parvibaculum lavamentivorans DS-1 AsmA family protein YP_001414555.1 3523350 D 402881 CDS YP_001414556.1 154253732 5456732 3525320..3526069 1 NC_009719.1 PFAM: leucyl/phenylalanyl-tRNA--protein transferase; KEGG: mmr:Mmar10_1264 leucyltransferase; leucyltransferase 3526069 5456732 Plav_3294 Parvibaculum lavamentivorans DS-1 leucyltransferase YP_001414556.1 3525320 D 402881 CDS YP_001414557.1 154253733 5456064 complement(3526006..3526413) 1 NC_009719.1 KEGG: mes:Meso_1718 cellulase-like protein; cellulase-like protein 3526413 5456064 Plav_3295 Parvibaculum lavamentivorans DS-1 cellulase-like protein YP_001414557.1 3526006 R 402881 CDS YP_001414558.1 154253734 5455645 complement(3526417..3526911) 1 NC_009719.1 PFAM: Mammalian cell entry related domain protein; KEGG: mag:amb2743 ABC-type transport system involved in resistance to organic solvents, periplasmic component; hypothetical protein 3526911 5455645 Plav_3296 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414558.1 3526417 R 402881 CDS YP_001414559.1 154253735 5455658 complement(3526961..3527359) 1 NC_009719.1 PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: rpd:RPD_2418 NADH:ubiquinone oxidoreductase 17.2 kD subunit; NADH:ubiquinone oxidoreductase 17.2 kD subunit 3527359 5455658 Plav_3297 Parvibaculum lavamentivorans DS-1 NADH:ubiquinone oxidoreductase 17.2 kD subunit YP_001414559.1 3526961 R 402881 CDS YP_001414560.1 154253736 5455872 complement(3527468..3528154) 1 NC_009719.1 PFAM: response regulator receiver; KEGG: chemotaxis protein CheYIII; response regulator receiver protein 3528154 5455872 Plav_3298 Parvibaculum lavamentivorans DS-1 response regulator receiver protein YP_001414560.1 3527468 R 402881 CDS YP_001414561.1 154253737 5455878 3528390..3532124 1 NC_009719.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 3532124 5455878 Plav_3299 Parvibaculum lavamentivorans DS-1 ribonucleotide-diphosphate reductase subunit alpha YP_001414561.1 3528390 D 402881 CDS YP_001414562.1 154253738 5455668 complement(3532587..3533615) 1 NC_009719.1 hypothetical protein 3533615 5455668 Plav_3300 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414562.1 3532587 R 402881 CDS YP_001414563.1 154253739 5456331 3533733..3534266 1 NC_009719.1 PFAM: beta-Ig-H3/fasciclin; KEGG: rde:RD1_3293 hypothetical protein; beta-Ig-H3/fasciclin 3534266 5456331 Plav_3301 Parvibaculum lavamentivorans DS-1 beta-Ig-H3/fasciclin YP_001414563.1 3533733 D 402881 CDS YP_001414564.1 154253740 5456485 complement(3534351..3536174) 1 NC_009719.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 3536174 aspS 5456485 aspS Parvibaculum lavamentivorans DS-1 aspartyl-tRNA synthetase YP_001414564.1 3534351 R 402881 CDS YP_001414565.1 154253741 5456588 3536445..3537614 1 NC_009719.1 PFAM: acyltransferase 3; KEGG: bam:Bamb_3359 acyltransferase 3; acyltransferase 3 3537614 5456588 Plav_3303 Parvibaculum lavamentivorans DS-1 acyltransferase 3 YP_001414565.1 3536445 D 402881 CDS YP_001414566.1 154253742 5456481 3537745..3539589 1 NC_009719.1 KEGG: sus:Acid_6600 hypothetical protein; hypothetical protein 3539589 5456481 Plav_3304 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414566.1 3537745 D 402881 CDS YP_001414567.1 154253743 5456663 3539735..3540304 1 NC_009719.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: rpa:RPA0118 dTDP-6-deoxy-D-glucose-3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase 3540304 5456663 Plav_3305 Parvibaculum lavamentivorans DS-1 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001414567.1 3539735 D 402881 CDS YP_001414568.1 154253744 5456830 3540358..3541428 1 NC_009719.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rpd:RPD_1571 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 3541428 5456830 Plav_3306 Parvibaculum lavamentivorans DS-1 dTDP-glucose 4,6-dehydratase YP_001414568.1 3540358 D 402881 CDS YP_001414569.1 154253745 5456839 3541780..3542682 1 NC_009719.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mca:MCA1283 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 3542682 5456839 Plav_3308 Parvibaculum lavamentivorans DS-1 glucose-1-phosphate thymidylyltransferase YP_001414569.1 3541780 D 402881 CDS YP_001414570.1 154253746 5455799 3542779..3543723 1 NC_009719.1 PFAM: glycosyl transferase family 2; KEGG: oih:OB2419 hypothetical protein; glycosyl transferase family protein 3543723 5455799 Plav_3309 Parvibaculum lavamentivorans DS-1 glycosyl transferase family protein YP_001414570.1 3542779 D 402881 CDS YP_001414571.1 154253747 5456216 3543717..3544364 1 NC_009719.1 KEGG: neu:NE2172 SAM (and some other nucleotide) binding motif; SAM-binding motif-containing protein 3544364 5456216 Plav_3310 Parvibaculum lavamentivorans DS-1 SAM-binding motif-containing protein YP_001414571.1 3543717 D 402881 CDS YP_001414572.1 154253748 5456671 3544364..3545029 1 NC_009719.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: mbb:BCG_1568c hypothetical protein; hexapaptide repeat-containing transferase 3545029 5456671 Plav_3311 Parvibaculum lavamentivorans DS-1 hexapaptide repeat-containing transferase YP_001414572.1 3544364 D 402881 CDS YP_001414573.1 154253749 5455127 complement(3545137..3545835) 1 NC_009719.1 PFAM: WbqC-like family protein; KEGG: neu:NE2176 hypothetical protein; WbqC-like family protein 3545835 5455127 Plav_3312 Parvibaculum lavamentivorans DS-1 WbqC-like family protein YP_001414573.1 3545137 R 402881 CDS YP_001414574.1 154253750 5455399 complement(3545832..3547391) 1 NC_009719.1 KEGG: neu:NE2177 hypothetical protein; hypothetical protein 3547391 5455399 Plav_3313 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414574.1 3545832 R 402881 CDS YP_001414575.1 154253751 5456181 complement(3547417..3548688) 1 NC_009719.1 KEGG: rsp:RSP_3985 hypothetical protein; hypothetical protein 3548688 5456181 Plav_3314 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414575.1 3547417 R 402881 CDS YP_001414576.1 154253752 5456149 3548879..3551284 1 NC_009719.1 KEGG: rle:RL0805 putative transmembrane protein; hypothetical protein 3551284 5456149 Plav_3315 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414576.1 3548879 D 402881 CDS YP_001414577.1 154253753 5453899 3551316..3552140 1 NC_009719.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: rle:RL0802 putative deoxygenase; phytanoyl-CoA dioxygenase 3552140 5453899 Plav_3316 Parvibaculum lavamentivorans DS-1 phytanoyl-CoA dioxygenase YP_001414577.1 3551316 D 402881 CDS YP_001414578.1 154253754 5454678 complement(3552133..3553074) 1 NC_009719.1 KEGG: mtf:TBFG_11533 hypothetical protein; hypothetical protein 3553074 5454678 Plav_3317 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414578.1 3552133 R 402881 CDS YP_001414579.1 154253755 5454061 3553258..3554409 1 NC_009719.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rle:RL0803 hypothetical protein; type 12 methyltransferase 3554409 5454061 Plav_3318 Parvibaculum lavamentivorans DS-1 type 12 methyltransferase YP_001414579.1 3553258 D 402881 CDS YP_001414580.1 154253756 5454571 complement(3554430..3555353) 1 NC_009719.1 PFAM: glycosyl transferase family 2; KEGG: chu:CHU_2999 b-glycosyltransferase, glycosyltransferase family 2 protein; glycosyl transferase family protein 3555353 5454571 Plav_3319 Parvibaculum lavamentivorans DS-1 glycosyl transferase family protein YP_001414580.1 3554430 R 402881 CDS YP_001414581.1 154253757 5454862 complement(3555397..3556533) 1 NC_009719.1 catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; TDP-4-oxo-6-deoxy-D-glucose transaminase 3556533 5454862 Plav_3320 Parvibaculum lavamentivorans DS-1 TDP-4-oxo-6-deoxy-D-glucose transaminase YP_001414581.1 3555397 R 402881 CDS YP_001414582.1 154253758 5453386 complement(3556642..3557256) 1 NC_009719.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bra:BRADO0169 hypothetical protein; putative methyl transferase; type 12 methyltransferase 3557256 5453386 Plav_3321 Parvibaculum lavamentivorans DS-1 type 12 methyltransferase YP_001414582.1 3556642 R 402881 CDS YP_001414583.1 154253759 5454981 complement(3557267..3558223) 1 NC_009719.1 PFAM: putative methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: nmu:Nmul_A0287 generic methyltransferase; type 12 methyltransferase 3558223 5454981 Plav_3322 Parvibaculum lavamentivorans DS-1 type 12 methyltransferase YP_001414583.1 3557267 R 402881 CDS YP_001414584.1 154253760 5455063 complement(3558280..3558651) 1 NC_009719.1 KEGG: oih:OB2417 hypothetical protein; hypothetical protein 3558651 5455063 Plav_3323 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414584.1 3558280 R 402881 CDS YP_001414585.1 154253761 5453409 3558837..3560120 1 NC_009719.1 TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: mag:amb2836 ribonuclease D; ribonuclease D 3560120 5453409 Plav_3324 Parvibaculum lavamentivorans DS-1 ribonuclease D YP_001414585.1 3558837 D 402881 CDS YP_001414586.1 154253762 5454096 complement(3560165..3561661) 1 NC_009719.1 PFAM: Ppx/GppA phosphatase; KEGG: mlo:mlr8162 exopolyphosphatase; Ppx/GppA phosphatase 3561661 5454096 Plav_3325 Parvibaculum lavamentivorans DS-1 Ppx/GppA phosphatase YP_001414586.1 3560165 R 402881 CDS YP_001414587.1 154253763 5453965 complement(3561695..3563902) 1 NC_009719.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 3563902 5453965 Plav_3326 Parvibaculum lavamentivorans DS-1 polyphosphate kinase YP_001414587.1 3561695 R 402881 CDS YP_001414588.1 154253764 5455186 3564040..3564441 1 NC_009719.1 hypothetical protein 3564441 5455186 Plav_3327 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414588.1 3564040 D 402881 CDS YP_001414589.1 154253765 5455175 complement(3564438..3565118) 1 NC_009719.1 PFAM: Chromosomal replication initiator DnaA; KEGG: nha:Nham_2116 hypothetical protein; chromosomal replication initiator DnaA 3565118 5455175 Plav_3328 Parvibaculum lavamentivorans DS-1 chromosomal replication initiator DnaA YP_001414589.1 3564438 R 402881 CDS YP_001414590.1 154253766 5454484 complement(3565121..3566218) 1 NC_009719.1 PFAM: protein of unknown function UPF0118; KEGG: rsh:Rsph17029_2435 protein of unknown function UPF0118; hypothetical protein 3566218 5454484 Plav_3329 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414590.1 3565121 R 402881 CDS YP_001414591.1 154253767 5454965 complement(3566239..3567357) 1 NC_009719.1 KEGG: mag:amb2845 hypothetical protein; hypothetical protein 3567357 5454965 Plav_3330 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414591.1 3566239 R 402881 CDS YP_001414592.1 154253768 5455524 3567551..3568642 1 NC_009719.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: atc:AGR_C_2111 5'-phosphoribosyl-5-aminoimidazole synthetase; phosphoribosylformylglycinamidine cyclo-ligase 3568642 5455524 Plav_3331 Parvibaculum lavamentivorans DS-1 phosphoribosylformylglycinamidine cyclo-ligase YP_001414592.1 3567551 D 402881 CDS YP_001414593.1 154253769 5455408 3568639..3569283 1 NC_009719.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: rru:Rru_A2168 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 3569283 5455408 Plav_3332 Parvibaculum lavamentivorans DS-1 phosphoribosylglycinamide formyltransferase YP_001414593.1 3568639 D 402881 CDS YP_001414594.1 154253770 5456925 complement(3569344..3569766) 1 NC_009719.1 PFAM: nucleoside diphosphate kinase; KEGG: swi:Swit_0030 nucleoside-diphosphate kinase; nucleoside-diphosphate kinase 3569766 5456925 Plav_3333 Parvibaculum lavamentivorans DS-1 nucleoside-diphosphate kinase YP_001414594.1 3569344 R 402881 CDS YP_001414595.1 154253771 5455703 3569861..3571774 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mes:Meso_1754 ABC transporter related; ABC transporter-like protein 3571774 5455703 Plav_3334 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001414595.1 3569861 D 402881 CDS YP_001414596.1 154253772 5455680 complement(3571915..3572850) 1 NC_009719.1 PFAM: beta-lactamase domain protein; KEGG: nar:Saro_1798 beta-lactamase-like; beta-lactamase domain-containing protein 3572850 5455680 Plav_3335 Parvibaculum lavamentivorans DS-1 beta-lactamase domain-containing protein YP_001414596.1 3571915 R 402881 CDS YP_001414597.1 154253773 5455720 complement(3572950..3573399) 1 NC_009719.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: atc:AGR_C_2056 putative DNA polymerase III chi subunit; DNA polymerase III chi subunit HolC 3573399 5455720 Plav_3336 Parvibaculum lavamentivorans DS-1 DNA polymerase III chi subunit HolC YP_001414597.1 3572950 R 402881 CDS YP_001414598.1 154253774 5455769 complement(3573411..3574904) 1 NC_009719.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: rpc:RPC_2314 leucyl aminopeptidase; leucyl aminopeptidase 3574904 5455769 Plav_3337 Parvibaculum lavamentivorans DS-1 leucyl aminopeptidase YP_001414598.1 3573411 R 402881 CDS YP_001414599.1 154253775 5455803 3575217..3576383 1 NC_009719.1 PFAM: permease YjgP/YjgQ family protein; KEGG: hypothetical protein; YjgP/YjgQ family permease 3576383 5455803 Plav_3338 Parvibaculum lavamentivorans DS-1 YjgP/YjgQ family permease YP_001414599.1 3575217 D 402881 CDS YP_001414600.1 154253776 5455779 3576380..3577471 1 NC_009719.1 PFAM: permease YjgP/YjgQ family protein; KEGG: mag:amb3906 predicted permease; YjgP/YjgQ family permease 3577471 5455779 Plav_3339 Parvibaculum lavamentivorans DS-1 YjgP/YjgQ family permease YP_001414600.1 3576380 D 402881 CDS YP_001414601.1 154253777 5455640 3577530..3579761 1 NC_009719.1 PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: bbt:BBta_3829 putative organic solvent tolerance protein OstA (ImpA); organic solvent tolerance protein 3579761 5455640 Plav_3340 Parvibaculum lavamentivorans DS-1 organic solvent tolerance protein YP_001414601.1 3577530 D 402881 CDS YP_001414602.1 154253778 5456053 3579902..3581233 1 NC_009719.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: peptidyl-prolyl cis-trans isomerase family protein; SurA domain-containing protein 3581233 5456053 Plav_3341 Parvibaculum lavamentivorans DS-1 SurA domain-containing protein YP_001414602.1 3579902 D 402881 CDS YP_001414603.1 154253779 5456171 3581274..3582296 1 NC_009719.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; KEGG: mag:amb3717 pyridoxal phosphate biosynthesis protein; 4-hydroxythreonine-4-phosphate dehydrogenase 3582296 5456171 Plav_3342 Parvibaculum lavamentivorans DS-1 4-hydroxythreonine-4-phosphate dehydrogenase YP_001414603.1 3581274 D 402881 CDS YP_001414604.1 154253780 5456263 3582293..3583138 1 NC_009719.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: sit:TM1040_0944 dimethyladenosine transferase; dimethyladenosine transferase 3583138 5456263 Plav_3343 Parvibaculum lavamentivorans DS-1 dimethyladenosine transferase YP_001414604.1 3582293 D 402881 CDS YP_001414605.1 154253781 5456510 3583257..3584081 1 NC_009719.1 PFAM: glycosyl transferase family 2; KEGG: sit:TM1040_0077 glycosyl transferase, family 2; glycosyl transferase family protein 3584081 5456510 Plav_3344 Parvibaculum lavamentivorans DS-1 glycosyl transferase family protein YP_001414605.1 3583257 D 402881 CDS YP_001414606.1 154253782 5454789 3584194..3585243 1 NC_009719.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bja:bll4101 putative NAD-dependent alcohol dehydrogenase; alcohol dehydrogenase 3585243 5454789 Plav_3345 Parvibaculum lavamentivorans DS-1 alcohol dehydrogenase YP_001414606.1 3584194 D 402881 CDS YP_001414607.1 154253783 5456191 complement(3585324..3586088) 1 NC_009719.1 PFAM: Cephalosporin hydroxylase; KEGG: cbo:CBO2712 hydroxylase; cephalosporin hydroxylase 3586088 5456191 Plav_3346 Parvibaculum lavamentivorans DS-1 cephalosporin hydroxylase YP_001414607.1 3585324 R 402881 CDS YP_001414608.1 154253784 5455780 complement(3586098..3587270) 1 NC_009719.1 KEGG: cbo:CBO2713 methyltransferase; methyltransferase 3587270 5455780 Plav_3347 Parvibaculum lavamentivorans DS-1 methyltransferase YP_001414608.1 3586098 R 402881 CDS YP_001414609.1 154253785 5456800 complement(3587275..3588183) 1 NC_009719.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: sat:SYN_02652 CDP-4-dehydro-6-deoxy-D-gulose 4-reductase; NAD-dependent epimerase/dehydratase 3588183 5456800 Plav_3348 Parvibaculum lavamentivorans DS-1 NAD-dependent epimerase/dehydratase YP_001414609.1 3587275 R 402881 CDS YP_001414610.1 154253786 5453937 complement(3588274..3589137) 1 NC_009719.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_2382 glycosyl transferase, family 2; glycosyl transferase family protein 3589137 5453937 Plav_3349 Parvibaculum lavamentivorans DS-1 glycosyl transferase family protein YP_001414610.1 3588274 R 402881 CDS YP_001414611.1 154253787 5453657 complement(3589148..3590350) 1 NC_009719.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; Methyltransferase domain protein; C-methyltransferase; KEGG: vei:Veis_4417 C-methyltransferase; C-methyltransferase 3590350 5453657 Plav_3350 Parvibaculum lavamentivorans DS-1 C-methyltransferase YP_001414611.1 3589148 R 402881 CDS YP_001414612.1 154253788 5455082 complement(3590380..3590934) 1 NC_009719.1 PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: sme:SMb21428 putative dTDP-4-dehydrorhamnose 3,5-epimerase protein; dTDP-4-dehydrorhamnose 3,5-epimerase 3590934 5455082 Plav_3351 Parvibaculum lavamentivorans DS-1 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001414612.1 3590380 R 402881 CDS YP_001414613.1 154253789 5453924 complement(3590931..3592019) 1 NC_009719.1 TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sme:SMb21417 putative CDP-glucose 4,6-dehydratase protein; CDP-glucose 4,6-dehydratase 3592019 5453924 Plav_3352 Parvibaculum lavamentivorans DS-1 CDP-glucose 4,6-dehydratase YP_001414613.1 3590931 R 402881 CDS YP_001414614.1 154253790 5454637 complement(3592020..3592799) 1 NC_009719.1 TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: sme:SMb21416 putative glucose-1-phosphate cytidylyltransferase protein; glucose-1-phosphate cytidylyltransferase 3592799 5454637 Plav_3353 Parvibaculum lavamentivorans DS-1 glucose-1-phosphate cytidylyltransferase YP_001414614.1 3592020 R 402881 CDS YP_001414615.1 154253791 5454395 complement(3592812..3593450) 1 NC_009719.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 3593450 gmk 5454395 gmk Parvibaculum lavamentivorans DS-1 guanylate kinase YP_001414615.1 3592812 R 402881 CDS YP_001414616.1 154253792 5453913 complement(3593457..3594344) 1 NC_009719.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: rru:Rru_A0428 hypothetical protein; hypothetical protein 3594344 5453913 Plav_3355 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414616.1 3593457 R 402881 CDS YP_001414617.1 154253793 5454053 complement(3594404..3595453) 1 NC_009719.1 PFAM: aminodeoxychorismate lyase; KEGG: mes:Meso_1765 aminodeoxychorismate lyase; aminodeoxychorismate lyase 3595453 5454053 Plav_3356 Parvibaculum lavamentivorans DS-1 aminodeoxychorismate lyase YP_001414617.1 3594404 R 402881 CDS YP_001414618.1 154253794 5454654 complement(3595450..3596706) 1 NC_009719.1 PFAM: Beta-ketoacyl synthase; KEGG: bbt:BBta_3820 3-oxoacyl-(acyl-carrier-protein) synthase II; beta-ketoacyl synthase 3596706 5454654 Plav_3357 Parvibaculum lavamentivorans DS-1 beta-ketoacyl synthase YP_001414618.1 3595450 R 402881 CDS YP_001414619.1 154253795 5453959 complement(3596808..3597047) 1 NC_009719.1 TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: mag:amb2107 acyl carrier protein; acyl carrier protein 3597047 5453959 Plav_3358 Parvibaculum lavamentivorans DS-1 acyl carrier protein YP_001414619.1 3596808 R 402881 CDS YP_001414620.1 154253796 5454782 complement(3597305..3598042) 1 NC_009719.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mag:amb2106 dehydrogenase with different specificities; 3-oxoacyl-(acyl-carrier-protein) reductase 3598042 5454782 Plav_3359 Parvibaculum lavamentivorans DS-1 3-oxoacyl-(acyl-carrier-protein) reductase YP_001414620.1 3597305 R 402881 CDS YP_001414621.1 154253797 5455260 complement(3598058..3598999) 1 NC_009719.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: mag:amb2105 S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase 3598999 5455260 Plav_3360 Parvibaculum lavamentivorans DS-1 malonyl CoA-acyl carrier protein transacylase YP_001414621.1 3598058 R 402881 CDS YP_001414622.1 154253798 5455294 3599338..3599805 1 NC_009719.1 PFAM: ribosomal protein S6; KEGG: mlo:mll7846 30S ribosomal protein S6; 30S ribosomal protein S6 3599805 5455294 Plav_3361 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S6 YP_001414622.1 3599338 D 402881 CDS YP_001414623.1 154253799 5455361 3599805..3600050 1 NC_009719.1 PFAM: ribosomal protein S18; KEGG: 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18; 30S ribosomal protein S18 3600050 5455361 Plav_3362 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S18 YP_001414623.1 3599805 D 402881 CDS YP_001414624.1 154253800 5455440 3600073..3600678 1 NC_009719.1 PFAM: ribosomal protein L9; KEGG: bov:BOV_0458 ribosomal protein L9; 50S ribosomal protein L9 3600678 5455440 Plav_3363 Parvibaculum lavamentivorans DS-1 50S ribosomal protein L9 YP_001414624.1 3600073 D 402881 CDS YP_001414625.1 154253801 5454701 3600803..3602587 1 NC_009719.1 KEGG: rpe:RPE_2456 hypothetical protein; hypothetical protein 3602587 5454701 Plav_3364 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414625.1 3600803 D 402881 CDS YP_001414626.1 154253802 5455570 complement(3602779..3603144) 1 NC_009719.1 KEGG: sme:SMa1644 hypothetical protein; hypothetical protein 3603144 5455570 Plav_3365 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414626.1 3602779 R 402881 CDS YP_001414627.1 154253803 5456901 complement(3603470..3604264) 1 NC_009719.1 PFAM: UspA domain protein; KEGG: sal:Sala_2574 UspA; UspA domain-containing protein 3604264 5456901 Plav_3366 Parvibaculum lavamentivorans DS-1 UspA domain-containing protein YP_001414627.1 3603470 R 402881 CDS YP_001414628.1 154253804 5455496 complement(3604412..3606841) 1 NC_009719.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: bbt:BBta_7296 cadmium-exporting ATPase; heavy metal translocating P-type ATPase 3606841 5455496 Plav_3367 Parvibaculum lavamentivorans DS-1 heavy metal translocating P-type ATPase YP_001414628.1 3604412 R 402881 CDS YP_001414629.1 154253805 5455648 3607042..3608070 1 NC_009719.1 KEGG: pna:Pnap_2858 insertion element protein; insertion element protein 3608070 5455648 Plav_3368 Parvibaculum lavamentivorans DS-1 insertion element protein YP_001414629.1 3607042 D 402881 CDS YP_001414630.1 154253806 5454903 complement(3608183..3611365) 1 NC_009719.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: nha:Nham_4533 heavy metal efflux pump CzcA; CzcA family heavy metal efflux protein 3611365 5454903 Plav_3369 Parvibaculum lavamentivorans DS-1 CzcA family heavy metal efflux protein YP_001414630.1 3608183 R 402881 CDS YP_001414631.1 154253807 5456015 complement(3611377..3612483) 1 NC_009719.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: rpd:RPD_3342 secretion protein HlyD; RND family efflux transporter MFP subunit 3612483 5456015 Plav_3370 Parvibaculum lavamentivorans DS-1 RND family efflux transporter MFP subunit YP_001414631.1 3611377 R 402881 CDS YP_001414632.1 154253808 5456056 complement(3612480..3613703) 1 NC_009719.1 PFAM: outer membrane efflux protein; KEGG: bbt:BBta_7183 putative outer membrane protein precursor CzcC; outer membrane efflux protein 3613703 5456056 Plav_3371 Parvibaculum lavamentivorans DS-1 outer membrane efflux protein YP_001414632.1 3612480 R 402881 CDS YP_001414633.1 154253809 5456128 complement(3613825..3614142) 1 NC_009719.1 hypothetical protein 3614142 5456128 Plav_3372 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414633.1 3613825 R 402881 CDS YP_001414634.1 154253810 5456124 complement(3614265..3614675) 1 NC_009719.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: net:Neut_0085 transcriptional regulator, MerR family protein; MerR family transcriptional regulator 3614675 5456124 Plav_3373 Parvibaculum lavamentivorans DS-1 MerR family transcriptional regulator YP_001414634.1 3614265 R 402881 CDS YP_001414635.1 154253811 5456275 3614742..3614999 1 NC_009719.1 PFAM: Heavy metal transport/detoxification protein; KEGG: acr:Acry_3236 E1-E2 ATPase-associated domain protein; heavy metal transport/detoxification protein 3614999 5456275 Plav_3374 Parvibaculum lavamentivorans DS-1 heavy metal transport/detoxification protein YP_001414635.1 3614742 D 402881 CDS YP_001414636.1 154253812 5456203 3615811..3616557 1 NC_009719.1 KEGG: har:HEAR1967 hypothetical protein; hypothetical protein 3616557 5456203 Plav_3375 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414636.1 3615811 D 402881 CDS YP_001414637.1 154253813 5456381 3616676..3616888 1 NC_009719.1 PFAM: Prophage CP4-57 regulatory; KEGG: har:HEAR1968 putative CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage; phage transcriptional regulator AlpA 3616888 5456381 Plav_3376 Parvibaculum lavamentivorans DS-1 phage transcriptional regulator AlpA YP_001414637.1 3616676 D 402881 CDS YP_001414638.1 154253814 5456229 3616931..3617806 1 NC_009719.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: har:HEAR1969 putative chromosome partitioning related protein; cobyrinic acid ac-diamide synthase 3617806 5456229 Plav_3377 Parvibaculum lavamentivorans DS-1 cobyrinic acid ac-diamide synthase YP_001414638.1 3616931 D 402881 CDS YP_001414639.1 154253815 5456512 3617790..3618050 1 NC_009719.1 KEGG: har:HEAR1970 hypothetical protein; hypothetical protein 3618050 5456512 Plav_3378 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414639.1 3617790 D 402881 CDS YP_001414640.1 154253816 5456692 3618043..3619707 1 NC_009719.1 KEGG: har:HEAR1971 hypothetical protein; hypothetical protein 3619707 5456692 Plav_3379 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414640.1 3618043 D 402881 CDS YP_001414641.1 154253817 5456648 3619723..3620283 1 NC_009719.1 KEGG: har:HEAR1972 hypothetical protein; hypothetical protein 3620283 5456648 Plav_3380 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414641.1 3619723 D 402881 CDS YP_001414642.1 154253818 5453536 3620287..3621537 1 NC_009719.1 KEGG: har:HEAR1973 hypothetical protein; hypothetical protein 3621537 5453536 Plav_3381 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414642.1 3620287 D 402881 CDS YP_001414643.1 154253819 5453639 3621869..3622657 1 NC_009719.1 PFAM: Domain of unknown function DUF1845; KEGG: rme:Rmet_2295 hypothetical protein; hypothetical protein 3622657 5453639 Plav_3382 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414643.1 3621869 D 402881 CDS YP_001414644.1 154253820 5455149 3622654..3623181 1 NC_009719.1 KEGG: rme:Rmet_2296 hypothetical protein; hypothetical protein 3623181 5455149 Plav_3383 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414644.1 3622654 D 402881 CDS YP_001414645.1 154253821 5454314 3623255..3623695 1 NC_009719.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 3623695 5454314 Plav_3384 Parvibaculum lavamentivorans DS-1 single-stranded DNA-binding protein YP_001414645.1 3623255 D 402881 CDS YP_001414646.1 154253822 5454402 3623979..3626009 1 NC_009719.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 3626009 5454402 Plav_3385 Parvibaculum lavamentivorans DS-1 DNA topoisomerase III YP_001414646.1 3623979 D 402881 CDS YP_001414647.1 154253823 5453576 complement(3626733..3627368) 1 NC_009719.1 KEGG: rme:Rmet_2299 cation efflux protein; cation efflux protein 3627368 5453576 Plav_3386 Parvibaculum lavamentivorans DS-1 cation efflux protein YP_001414647.1 3626733 R 402881 CDS YP_001414648.1 154253824 5456855 3628095..3628382 1 NC_009719.1 KEGG: rme:Rmet_2301 hypothetical protein; hypothetical protein 3628382 5456855 Plav_3388 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414648.1 3628095 D 402881 CDS YP_001414649.1 154253825 5455376 complement(3628450..3628848) 1 NC_009719.1 TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: rme:Rmet_2302 transcriptional regulator, MerR family; MerR family transcriptional regulator 3628848 5455376 Plav_3389 Parvibaculum lavamentivorans DS-1 MerR family transcriptional regulator YP_001414649.1 3628450 R 402881 CDS YP_001414650.1 154253826 5455580 3628898..3631852 1 NC_009719.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rme:Rmet_2303 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 3631852 5455580 Plav_3390 Parvibaculum lavamentivorans DS-1 heavy metal translocating P-type ATPase YP_001414650.1 3628898 D 402881 CDS YP_001414651.1 154253827 5455811 3631856..3632356 1 NC_009719.1 TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: rme:Rmet_2304 lipoprotein signal peptidase; lipoprotein signal peptidase 3632356 5455811 Plav_3391 Parvibaculum lavamentivorans DS-1 lipoprotein signal peptidase YP_001414651.1 3631856 D 402881 CDS YP_001414652.1 154253828 5454640 3632693..3633004 1 NC_009719.1 KEGG: rme:Rmet_2305 hypothetical protein; hypothetical protein 3633004 5454640 Plav_3392 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414652.1 3632693 D 402881 CDS YP_001414653.1 154253829 5456255 3633342..3633554 1 NC_009719.1 KEGG: rme:Rmet_2306 hypothetical protein; hypothetical protein 3633554 5456255 Plav_3393 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414653.1 3633342 D 402881 CDS YP_001414654.1 154253830 5456272 3633576..3633968 1 NC_009719.1 KEGG: har:HEAR1982 hypothetical protein; hypothetical protein 3633968 5456272 Plav_3394 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414654.1 3633576 D 402881 CDS YP_001414655.1 154253831 5456007 3634182..3634919 1 NC_009719.1 KEGG: har:HEAR1983 hypothetical protein; hypothetical protein 3634919 5456007 Plav_3395 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414655.1 3634182 D 402881 CDS YP_001414656.1 154253832 5456079 3635016..3635294 1 NC_009719.1 KEGG: har:HEAR1985 hypothetical protein; hypothetical protein 3635294 5456079 Plav_3396 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414656.1 3635016 D 402881 CDS YP_001414657.1 154253833 5456981 3635582..3636394 1 NC_009719.1 KEGG: ajs:Ajs_1437 hypothetical protein; hypothetical protein 3636394 5456981 Plav_3397 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414657.1 3635582 D 402881 CDS YP_001414658.1 154253834 5456159 3636536..3636889 1 NC_009719.1 KEGG: xfa:XF1764 hypothetical protein; hypothetical protein 3636889 5456159 Plav_3398 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414658.1 3636536 D 402881 CDS YP_001414659.1 154253835 5456765 3637256..3638185 1 NC_009719.1 KEGG: ajs:Ajs_1294 hypothetical protein; hypothetical protein 3638185 5456765 Plav_3399 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414659.1 3637256 D 402881 CDS YP_001414660.1 154253836 5456558 3638244..3638933 1 NC_009719.1 KEGG: bxe:Bxe_A1208 hypothetical protein; hypothetical protein 3638933 5456558 Plav_3400 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414660.1 3638244 D 402881 CDS YP_001414661.1 154253837 5455904 3639028..3639354 1 NC_009719.1 KEGG: xcv:XCV2393 hypothetical protein; hypothetical protein 3639354 5455904 Plav_3401 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414661.1 3639028 D 402881 CDS YP_001414662.1 154253838 5456812 3639457..3639798 1 NC_009719.1 KEGG: net:Neut_0108 hypothetical protein; hypothetical protein 3639798 5456812 Plav_3402 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414662.1 3639457 D 402881 CDS YP_001414663.1 154253839 5456806 3639903..3640553 1 NC_009719.1 KEGG: har:HEAR1992 hypothetical protein; hypothetical protein 3640553 5456806 Plav_3403 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414663.1 3639903 D 402881 CDS YP_001414664.1 154253840 5456752 3640618..3641727 1 NC_009719.1 KEGG: ajs:Ajs_1420 hypothetical protein; hypothetical protein 3641727 5456752 Plav_3404 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414664.1 3640618 D 402881 CDS YP_001414665.1 154253841 5454869 3641831..3644110 1 NC_009719.1 PFAM: helicase domain protein; SMART: DEAD-like helicases; KEGG: har:HEAR1996 putative helicase from plasmid origin; helicase domain-containing protein 3644110 5454869 Plav_3405 Parvibaculum lavamentivorans DS-1 helicase domain-containing protein YP_001414665.1 3641831 D 402881 CDS YP_001414666.1 154253842 5454684 3644251..3645030 1 NC_009719.1 KEGG: fjo:Fjoh_3686 hypothetical protein; hypothetical protein 3645030 5454684 Plav_3406 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414666.1 3644251 D 402881 CDS YP_001414667.1 154253843 5453901 complement(3645099..3646913) 1 NC_009719.1 PFAM: UvrD/REP helicase; KEGG: har:HEAR1998 putative DNA helicase II; UvrD/REP helicase 3646913 5453901 Plav_3407 Parvibaculum lavamentivorans DS-1 UvrD/REP helicase YP_001414667.1 3645099 R 402881 CDS YP_001414668.1 154253844 5455240 complement(3646900..3648684) 1 NC_009719.1 KEGG: har:HEAR1999 hypothetical protein; hypothetical protein 3648684 5455240 Plav_3408 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414668.1 3646900 R 402881 CDS YP_001414669.1 154253845 5456131 3648888..3649508 1 NC_009719.1 KEGG: har:HEAR2000 hypothetical protein; hypothetical protein 3649508 5456131 Plav_3409 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414669.1 3648888 D 402881 CDS YP_001414670.1 154253846 5456997 3649505..3650155 1 NC_009719.1 KEGG: bxe:Bxe_A1199 hypothetical protein; hypothetical protein 3650155 5456997 Plav_3410 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414670.1 3649505 D 402881 CDS YP_001414671.1 154253847 5456604 3650170..3650895 1 NC_009719.1 KEGG: har:HEAR2002 conserved hypothetical protein; putative signal peptide; putative signal peptide 3650895 5456604 Plav_3411 Parvibaculum lavamentivorans DS-1 putative signal peptide YP_001414671.1 3650170 D 402881 CDS YP_001414672.1 154253848 5456516 3650877..3651467 1 NC_009719.1 PFAM: Lytic transglycosylase catalytic; KEGG: bxe:Bxe_A1197 hypothetical protein; lytic transglycosylase catalytic subunit 3651467 5456516 Plav_3412 Parvibaculum lavamentivorans DS-1 lytic transglycosylase catalytic subunit YP_001414672.1 3650877 D 402881 CDS YP_001414673.1 154253849 5454270 3651464..3652012 1 NC_009719.1 KEGG: bxe:Bxe_A1196 hypothetical protein; hypothetical protein 3652012 5454270 Plav_3413 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414673.1 3651464 D 402881 CDS YP_001414674.1 154253850 5454863 3652017..3654218 1 NC_009719.1 KEGG: har:HEAR2005 hypothetical protein; hypothetical protein 3654218 5454863 Plav_3414 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414674.1 3652017 D 402881 CDS YP_001414675.1 154253851 5454184 3654215..3654964 1 NC_009719.1 KEGG: har:HEAR2006 hypothetical protein; hypothetical protein 3654964 5454184 Plav_3415 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414675.1 3654215 D 402881 CDS YP_001414676.1 154253852 5456750 3655063..3655446 1 NC_009719.1 KEGG: rme:Rmet_2345 plasmid conserved hypothetical protein, RAQPRD; hypothetical protein 3655446 5456750 Plav_3416 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414676.1 3655063 D 402881 CDS YP_001414677.1 154253853 5456803 3655443..3655676 1 NC_009719.1 KEGG: ajs:Ajs_1263 hypothetical protein; hypothetical protein 3655676 5456803 Plav_3417 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414677.1 3655443 D 402881 CDS YP_001414678.1 154253854 5456798 3655693..3656052 1 NC_009719.1 KEGG: ajs:Ajs_1404 hypothetical protein; hypothetical protein 3656052 5456798 Plav_3418 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414678.1 3655693 D 402881 CDS YP_001414679.1 154253855 5456282 3656064..3656474 1 NC_009719.1 KEGG: bxe:Bxe_A1189 hypothetical protein; hypothetical protein 3656474 5456282 Plav_3419 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414679.1 3656064 D 402881 CDS YP_001414680.1 154253856 5456783 3656471..3657160 1 NC_009719.1 KEGG: xcb:XC_2035 hypothetical protein; hypothetical protein 3657160 5456783 Plav_3420 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414680.1 3656471 D 402881 CDS YP_001414681.1 154253857 5456809 3657157..3658083 1 NC_009719.1 KEGG: xcv:XCV2370 putative secreted protein; hypothetical protein 3658083 5456809 Plav_3421 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414681.1 3657157 D 402881 CDS YP_001414682.1 154253858 5456060 3658073..3659482 1 NC_009719.1 KEGG: rme:Rmet_2351 putative secreted protein; hypothetical protein 3659482 5456060 Plav_3422 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414682.1 3658073 D 402881 CDS YP_001414683.1 154253859 5455788 3659463..3659912 1 NC_009719.1 KEGG: har:HEAR2019 conserved hypothetical protein; putative signal peptide; putative signal peptide 3659912 5455788 Plav_3423 Parvibaculum lavamentivorans DS-1 putative signal peptide YP_001414683.1 3659463 D 402881 CDS YP_001414684.1 154253860 5455758 3659912..3662782 1 NC_009719.1 KEGG: xcv:XCV2367 hypothetical protein; hypothetical protein 3662782 5455758 Plav_3424 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414684.1 3659912 D 402881 CDS YP_001414685.1 154253861 5456601 3662795..3663559 1 NC_009719.1 KEGG: xcv:XCV2366 hypothetical protein; hypothetical protein 3663559 5456601 Plav_3425 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414685.1 3662795 D 402881 CDS YP_001414686.1 154253862 5455830 3663744..3664238 1 NC_009719.1 PFAM: DNA repair protein RadC; KEGG: har:HEAR2022 putative DNA repair protein, RadC family DNA repair protein; CP4-6 prophage; DNA repair protein RadC 3664238 5455830 Plav_3426 Parvibaculum lavamentivorans DS-1 DNA repair protein RadC YP_001414686.1 3663744 D 402881 CDS YP_001414687.1 154253863 5456041 3664398..3664844 1 NC_009719.1 PFAM: protein of unknown function DUF1525; KEGG: har:HEAR2023 hypothetical protein; hypothetical protein 3664844 5456041 Plav_3427 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414687.1 3664398 D 402881 CDS YP_001414688.1 154253864 5456427 3664841..3665788 1 NC_009719.1 PFAM: protein of unknown function DUF1527; KEGG: bxe:Bxe_A1180 hypothetical protein; hypothetical protein 3665788 5456427 Plav_3428 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414688.1 3664841 D 402881 CDS YP_001414689.1 154253865 5456786 3665798..3667192 1 NC_009719.1 KEGG: rme:Rmet_2358 hypothetical protein; hypothetical protein 3667192 5456786 Plav_3429 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414689.1 3665798 D 402881 CDS YP_001414690.1 154253866 5456743 3667189..3667548 1 NC_009719.1 KEGG: ajs:Ajs_1250 hypothetical protein; hypothetical protein 3667548 5456743 Plav_3430 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414690.1 3667189 D 402881 CDS YP_001414691.1 154253867 5456712 3667564..3669087 1 NC_009719.1 KEGG: ajs:Ajs_1391 hypothetical protein; hypothetical protein 3669087 5456712 Plav_3431 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414691.1 3667564 D 402881 CDS YP_001414692.1 154253868 5456324 complement(3669094..3669453) 1 NC_009719.1 KEGG: xcv:XCV2359 hypothetical protein; hypothetical protein 3669453 5456324 Plav_3432 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414692.1 3669094 R 402881 CDS YP_001414693.1 154253869 5456568 complement(3669481..3669939) 1 NC_009719.1 KEGG: bxe:Bxe_A1175 hypothetical protein; hypothetical protein 3669939 5456568 Plav_3433 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414693.1 3669481 R 402881 CDS YP_001414694.1 154253870 5456688 complement(3669939..3670325) 1 NC_009719.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: ajs:Ajs_1246 transcriptional regulator, AbrB family; AbrB family transcriptional regulator 3670325 5456688 Plav_3434 Parvibaculum lavamentivorans DS-1 AbrB family transcriptional regulator YP_001414694.1 3669939 R 402881 CDS YP_001414695.1 154253871 5456050 3670558..3672423 1 NC_009719.1 PFAM: protein of unknown function DUF1528; Relaxase; KEGG: xfa:XF1753 hypothetical protein; relaxase 3672423 5456050 Plav_3435 Parvibaculum lavamentivorans DS-1 relaxase YP_001414695.1 3670558 D 402881 CDS YP_001414696.1 154253872 5456586 complement(3672693..3673070) 1 NC_009719.1 hypothetical protein 3673070 5456586 Plav_3436 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414696.1 3672693 R 402881 CDS YP_001414697.1 154253873 5456444 complement(3673265..3674044) 1 NC_009719.1 PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase; KEGG: bvi:Bcep1808_6226 IstB domain protein ATP-binding protein; IstB ATP-binding domain-containing protein 3674044 5456444 Plav_3437 Parvibaculum lavamentivorans DS-1 IstB ATP-binding domain-containing protein YP_001414697.1 3673265 R 402881 CDS YP_001414698.1 154253874 5456509 complement(3675607..3677208) 1 NC_009719.1 PFAM: Integrase catalytic region; transposase IS3/IS911 family protein; KEGG: pol:Bpro_5143 integrase, catalytic region; integrase catalytic subunit 3677208 5456509 Plav_3440 Parvibaculum lavamentivorans DS-1 integrase catalytic subunit YP_001414698.1 3675607 R 402881 CDS YP_001414699.1 154253875 5456977 complement(3677496..3679439) 1 NC_009719.1 KEGG: xcb:XC_3476 hypothetical protein; hypothetical protein 3679439 5456977 Plav_3441 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414699.1 3677496 R 402881 CDS YP_001414700.1 154253876 5456405 complement(3679436..3680482) 1 NC_009719.1 KEGG: xac:XAC0808 hypothetical protein; hypothetical protein 3680482 5456405 Plav_3442 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414700.1 3679436 R 402881 CDS YP_001414701.1 154253877 5456075 3681566..3683053 1 NC_009719.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: har:HEAR2593 putative outer membrane transport protein involved in copper (silver) tolerance (CusC); RND efflux system outer membrane lipoprotein 3683053 5456075 Plav_3444 Parvibaculum lavamentivorans DS-1 RND efflux system outer membrane lipoprotein YP_001414701.1 3681566 D 402881 CDS YP_001414702.1 154253878 5456150 3683068..3684147 1 NC_009719.1 PFAM: secretion protein HlyD family protein; KEGG: azo:azo2911 membrane fusion protein; secretion protein HlyD family protein 3684147 5456150 Plav_3445 Parvibaculum lavamentivorans DS-1 secretion protein HlyD family protein YP_001414702.1 3683068 D 402881 CDS YP_001414703.1 154253879 5456224 3684151..3686919 1 NC_009719.1 PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: ajs:Ajs_2361 ABC transporter related; ABC transporter-like protein 3686919 5456224 Plav_3446 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001414703.1 3684151 D 402881 CDS YP_001414704.1 154253880 5456210 3686921..3688051 1 NC_009719.1 PFAM: ABC-2 type transporter; KEGG: ajs:Ajs_2362 ABC-2 type transporter; ABC transporter 3688051 5456210 Plav_3447 Parvibaculum lavamentivorans DS-1 ABC transporter YP_001414704.1 3686921 D 402881 CDS YP_001414705.1 154253881 5454661 3688099..3688560 1 NC_009719.1 KEGG: bvi:Bcep1808_6163 hypothetical protein; hypothetical protein 3688560 5454661 Plav_3448 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414705.1 3688099 D 402881 CDS YP_001414706.1 154253882 5456178 3688550..3689296 1 NC_009719.1 TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rme:Rmet_1333 acetoacetyl-CoA reductase; acetoacetyl-CoA reductase 3689296 5456178 Plav_3449 Parvibaculum lavamentivorans DS-1 acetoacetyl-CoA reductase YP_001414706.1 3688550 D 402881 CDS YP_001414707.1 154253883 5456208 3689382..3691886 1 NC_009719.1 KEGG: bvi:Bcep1808_6174 hypothetical protein; hypothetical protein 3691886 5456208 Plav_3450 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414707.1 3689382 D 402881 CDS YP_001414708.1 154253884 5456125 3691883..3693304 1 NC_009719.1 PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: har:HEAR1516 putative phosphate acetyltransferase; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 3693304 5456125 Plav_3451 Parvibaculum lavamentivorans DS-1 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase YP_001414708.1 3691883 D 402881 CDS YP_001414709.1 154253885 5456103 3693348..3694100 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rme:Rmet_1335 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3694100 5456103 Plav_3452 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001414709.1 3693348 D 402881 CDS YP_001414710.1 154253886 5455397 3694180..3695418 1 NC_009719.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: har:HEAR1515 acetate kinase (acetokinase); acetate kinase 3695418 5455397 Plav_3453 Parvibaculum lavamentivorans DS-1 acetate kinase YP_001414710.1 3694180 D 402881 CDS YP_001414711.1 154253887 5456026 3695415..3696620 1 NC_009719.1 PFAM: sodium/glutamate symporter; KEGG: psa:PST_0687 sodium-glutamate symporter; sodium/glutamate symporter 3696620 5456026 Plav_3454 Parvibaculum lavamentivorans DS-1 sodium/glutamate symporter YP_001414711.1 3695415 D 402881 CDS YP_001414712.1 154253888 5455975 3696801..3698552 1 NC_009719.1 PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: eba:ebA5073 putative poly-beta-hydroxyalkanoate synthase; poly-beta-hydroxybutyrate polymerase domain-containing protein 3698552 5455975 Plav_3455 Parvibaculum lavamentivorans DS-1 poly-beta-hydroxybutyrate polymerase domain-containing protein YP_001414712.1 3696801 D 402881 CDS YP_001414713.1 154253889 5455924 3698639..3699133 1 NC_009719.1 PFAM: UspA domain protein; KEGG: rme:Rmet_1334 UspA; UspA domain-containing protein 3699133 5455924 Plav_3456 Parvibaculum lavamentivorans DS-1 UspA domain-containing protein YP_001414713.1 3698639 D 402881 CDS YP_001414714.1 154253890 5456020 3699130..3700203 1 NC_009719.1 KEGG: xcb:XC_0709 hypothetical protein; hypothetical protein 3700203 5456020 Plav_3457 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414714.1 3699130 D 402881 CDS YP_001414715.1 154253891 5455898 3700407..3701303 1 NC_009719.1 Catalyzes the formation of PRPP from ATP and ribose 5-phosphate; phosphoribosylpyrophosphate synthetase 3701303 5455898 Plav_3458 Parvibaculum lavamentivorans DS-1 phosphoribosylpyrophosphate synthetase YP_001414715.1 3700407 D 402881 CDS YP_001414716.1 154253892 5455394 3701342..3703720 1 NC_009719.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: mes:Meso_3878 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 3703720 5455394 Plav_3459 Parvibaculum lavamentivorans DS-1 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase YP_001414716.1 3701342 D 402881 CDS YP_001414717.1 154253893 5455914 3703756..3705114 1 NC_009719.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: bbr:BB2340 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 3705114 5455914 Plav_3460 Parvibaculum lavamentivorans DS-1 beta-lactamase domain-containing protein YP_001414717.1 3703756 D 402881 CDS YP_001414718.1 154253894 5455912 3705111..3706628 1 NC_009719.1 catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine; thymidine phosphorylase 3706628 5455912 Plav_3461 Parvibaculum lavamentivorans DS-1 thymidine phosphorylase YP_001414718.1 3705111 D 402881 CDS YP_001414719.1 154253895 5455946 3706818..3707708 1 NC_009719.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_2400 transcriptional regulator, LysR family; LysR family transcriptional regulator 3707708 5455946 Plav_3462 Parvibaculum lavamentivorans DS-1 LysR family transcriptional regulator YP_001414719.1 3706818 D 402881 CDS YP_001414720.1 154253896 5455939 complement(3707732..3708025) 1 NC_009719.1 PFAM: helix-turn-helix domain protein; KEGG: rme:Rmet_2401 transcriptional regulator, XRE family; XRE family transcriptional regulator 3708025 5455939 Plav_3463 Parvibaculum lavamentivorans DS-1 XRE family transcriptional regulator YP_001414720.1 3707732 R 402881 CDS YP_001414721.1 154253897 5455919 3708145..3708798 1 NC_009719.1 PFAM: LysR substrate-binding; KEGG: har:HEAR2052 hypothetical protein; LysR family transcriptional regulator 3708798 5455919 Plav_3464 Parvibaculum lavamentivorans DS-1 LysR family transcriptional regulator YP_001414721.1 3708145 D 402881 CDS YP_001414722.1 154253898 5455209 complement(3709966..3711900) 1 NC_009719.1 PFAM: integrase family protein; KEGG: har:HEAR2054 integrase; integrase family protein 3711900 5455209 Plav_3466 Parvibaculum lavamentivorans DS-1 integrase family protein YP_001414722.1 3709966 R 402881 CDS YP_001414723.1 154253899 5456932 3712125..3714029 1 NC_009719.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rpa:RPA3260 putative cation-transporting P-type ATPase; heavy metal translocating P-type ATPase 3714029 5456932 Plav_3467 Parvibaculum lavamentivorans DS-1 heavy metal translocating P-type ATPase YP_001414723.1 3712125 D 402881 CDS YP_001414724.1 154253900 5455351 3714093..3715238 1 NC_009719.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mes:Meso_4111 potassium transporter (trk family); FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3715238 5455351 Plav_3468 Parvibaculum lavamentivorans DS-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001414724.1 3714093 D 402881 CDS YP_001414725.1 154253901 5455814 complement(3715345..3715953) 1 NC_009719.1 KEGG: rsh:Rsph17029_3024 hypothetical protein; hypothetical protein 3715953 5455814 Plav_3469 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414725.1 3715345 R 402881 CDS YP_001414726.1 154253902 5455646 complement(3716151..3716498) 1 NC_009719.1 KEGG: rpe:RPE_2440 hypothetical protein; hypothetical protein 3716498 5455646 Plav_3470 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414726.1 3716151 R 402881 CDS YP_001414727.1 154253903 5455728 complement(3716847..3717263) 1 NC_009719.1 KEGG: sme:SMa0285 hypothetical protein; hypothetical protein 3717263 5455728 Plav_3471 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414727.1 3716847 R 402881 CDS YP_001414728.1 154253904 5453605 complement(3717260..3717913) 1 NC_009719.1 PFAM: protein of unknown function DUF433; KEGG: pna:Pnap_4858 protein of unknown function DUF433; hypothetical protein 3717913 5453605 Plav_3472 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414728.1 3717260 R 402881 CDS YP_001414729.1 154253905 5455258 3718755..3720002 1 NC_009719.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mes:Meso_3871 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 3720002 5455258 Plav_3473 Parvibaculum lavamentivorans DS-1 cyclopropane-fatty-acyl-phospholipid synthase YP_001414729.1 3718755 D 402881 CDS YP_001414730.1 154253906 5456947 complement(3720017..3720415) 1 NC_009719.1 PFAM: DoxX family protein; KEGG: sme:SMb20597 hypothetical protein; DoxX family protein 3720415 5456947 Plav_3474 Parvibaculum lavamentivorans DS-1 DoxX family protein YP_001414730.1 3720017 R 402881 CDS YP_001414731.1 154253907 5455620 3720781..3722274 1 NC_009719.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; KEGG: rpb:RPB_2458 replicative DNA helicase; replicative DNA helicase 3722274 5455620 Plav_3475 Parvibaculum lavamentivorans DS-1 replicative DNA helicase YP_001414731.1 3720781 D 402881 CDS YP_001414732.1 154253908 5455531 complement(3722391..3722801) 1 NC_009719.1 PFAM: CBS domain containing protein; KEGG: vpa:VP0814 hypothetical protein; signal-transduction protein 3722801 5455531 Plav_3476 Parvibaculum lavamentivorans DS-1 signal-transduction protein YP_001414732.1 3722391 R 402881 CDS YP_001414733.1 154253909 5453756 complement(3722798..3723148) 1 NC_009719.1 KEGG: ppr:PBPRA2810 putative nitrogen regulatory protein P-II family protein; putative nitrogen regulatory protein P-II family protein 3723148 5453756 Plav_3477 Parvibaculum lavamentivorans DS-1 putative nitrogen regulatory protein P-II family protein YP_001414733.1 3722798 R 402881 CDS YP_001414734.1 154253910 5454885 complement(3723138..3723905) 1 NC_009719.1 PFAM: protein of unknown function DUF1538; KEGG: ppr:PBPRA2811 hypothetical PTS system mannose-specific, factor IIC; hypothetical protein 3723905 5454885 Plav_3478 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414734.1 3723138 R 402881 CDS YP_001414735.1 154253911 5455425 complement(3723909..3724646) 1 NC_009719.1 PFAM: protein of unknown function DUF1538; KEGG: cps:CPS_1953 hypothetical protein; hypothetical protein 3724646 5455425 Plav_3479 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414735.1 3723909 R 402881 CDS YP_001414736.1 154253912 5454179 3724742..3725611 1 NC_009719.1 PFAM: UspA domain protein; KEGG: pau:PA14_56590 putative universal stress protein; UspA domain-containing protein 3725611 5454179 Plav_3480 Parvibaculum lavamentivorans DS-1 UspA domain-containing protein YP_001414736.1 3724742 D 402881 CDS YP_001414737.1 154253913 5455563 complement(3725685..3727799) 1 NC_009719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rru:Rru_A3213 PAS/PAC sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 3727799 5455563 Plav_3481 Parvibaculum lavamentivorans DS-1 integral membrane sensor signal transduction histidine kinase YP_001414737.1 3725685 R 402881 CDS YP_001414738.1 154253914 5454952 3728013..3729239 1 NC_009719.1 TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; KEGG: rpe:RPE_3334 alanine racemase; alanine racemase 3729239 5454952 Plav_3482 Parvibaculum lavamentivorans DS-1 alanine racemase YP_001414738.1 3728013 D 402881 CDS YP_001414739.1 154253915 5455478 3729236..3730009 1 NC_009719.1 PFAM: protein of unknown function DUF140; KEGG: rru:Rru_A0408 protein of unknown function DUF140; hypothetical protein 3730009 5455478 Plav_3483 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414739.1 3729236 D 402881 CDS YP_001414740.1 154253916 5455485 3730014..3730787 1 NC_009719.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb2093 ABC-type transport system involved in resistance to organic solvents; ABC transporter-like protein 3730787 5455485 Plav_3484 Parvibaculum lavamentivorans DS-1 ABC transporter-like protein YP_001414740.1 3730014 D 402881 CDS YP_001414741.1 154253917 5455405 3730928..3732352 1 NC_009719.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 3732352 5455405 Plav_3485 Parvibaculum lavamentivorans DS-1 DNA repair protein RadA YP_001414741.1 3730928 D 402881 CDS YP_001414742.1 154253918 5455404 3732383..3733081 1 NC_009719.1 PFAM: Colicin V production protein; KEGG: mes:Meso_0984 colicin V production protein; colicin V production protein 3733081 5455404 Plav_3486 Parvibaculum lavamentivorans DS-1 colicin V production protein YP_001414742.1 3732383 D 402881 CDS YP_001414743.1 154253919 5454804 3733108..3734619 1 NC_009719.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 3734619 5454804 Plav_3487 Parvibaculum lavamentivorans DS-1 amidophosphoribosyltransferase YP_001414743.1 3733108 D 402881 CDS YP_001414744.1 154253920 5454781 3734646..3735365 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rru:Rru_A0403 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3735365 5454781 Plav_3488 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001414744.1 3734646 D 402881 CDS YP_001414745.1 154253921 5455253 complement(3735370..3735696) 1 NC_009719.1 KEGG: mlo:mlr3986 hypothetical protein; hypothetical protein 3735696 5455253 Plav_3489 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414745.1 3735370 R 402881 CDS YP_001414746.1 154253922 5454134 3735762..3736136 1 NC_009719.1 PFAM: helix-turn-helix HxlR type; KEGG: rpa:RPA0326 DUF24, predicted transcriptional regulator, related to MarR family; HxlR family transcriptional regulator 3736136 5454134 Plav_3490 Parvibaculum lavamentivorans DS-1 HxlR family transcriptional regulator YP_001414746.1 3735762 D 402881 CDS YP_001414747.1 154253923 5454643 3736255..3739155 1 NC_009719.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: atc:AGR_L_1617 hypothetical protein; PAS/PAC sensor hybrid histidine kinase 3739155 5454643 Plav_3491 Parvibaculum lavamentivorans DS-1 PAS/PAC sensor hybrid histidine kinase YP_001414747.1 3736255 D 402881 CDS YP_001414748.1 154253924 5455168 complement(3739166..3740587) 1 NC_009719.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: sit:TM1040_0991 small GTP-binding protein domain; small GTP-binding protein 3740587 5455168 Plav_3492 Parvibaculum lavamentivorans DS-1 small GTP-binding protein YP_001414748.1 3739166 R 402881 CDS YP_001414749.1 154253925 5453906 complement(3740609..3741994) 1 NC_009719.1 PFAM: Pyrrolo-quinoline quinone; KEGG: mag:amb1343 WD40-like repeat; Pyrrolo-quinoline quinone 3741994 5453906 Plav_3493 Parvibaculum lavamentivorans DS-1 Pyrrolo-quinoline quinone YP_001414749.1 3740609 R 402881 CDS YP_001414750.1 154253926 5454908 complement(3742001..3742723) 1 NC_009719.1 KEGG: rpc:RPC_2277 hypothetical protein; hypothetical protein 3742723 5454908 Plav_3494 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414750.1 3742001 R 402881 CDS YP_001414751.1 154253927 5453691 complement(3742871..3743695) 1 NC_009719.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; KEGG: rpe:RPE_3348 3-methyl-2-oxobutanoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3743695 5453691 Plav_3495 Parvibaculum lavamentivorans DS-1 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001414751.1 3742871 R 402881 CDS YP_001414752.1 154253928 5454732 complement(3743884..3744642) 1 NC_009719.1 KEGG: sit:TM1040_2884 hypothetical protein; hypothetical protein 3744642 5454732 Plav_3496 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414752.1 3743884 R 402881 CDS YP_001414753.1 154253929 5454681 complement(3744639..3745175) 1 NC_009719.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pmt:PMT0296 TPR repeat; hypothetical protein 3745175 5454681 Plav_3497 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414753.1 3744639 R 402881 CDS YP_001414754.1 154253930 5454205 complement(3745224..3745640) 1 NC_009719.1 KEGG: mva:Mvan_3975 hypothetical protein; hypothetical protein 3745640 5454205 Plav_3498 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414754.1 3745224 R 402881 CDS YP_001414755.1 154253931 5455192 complement(3745637..3746905) 1 NC_009719.1 PFAM: cytochrome P450; KEGG: mva:Mvan_3974 cytochrome P450; cytochrome P450 3746905 5455192 Plav_3499 Parvibaculum lavamentivorans DS-1 cytochrome P450 YP_001414755.1 3745637 R 402881 CDS YP_001414756.1 154253932 5454303 3747065..3747565 1 NC_009719.1 SMART: regulatory protein MarR; MarR family transcriptional regulator 3747565 5454303 Plav_3500 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001414756.1 3747065 D 402881 CDS YP_001414757.1 154253933 5454502 3747676..3748689 1 NC_009719.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: bra:BRADO3992 aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH); aspartate-semialdehyde dehydrogenase 3748689 5454502 Plav_3501 Parvibaculum lavamentivorans DS-1 aspartate-semialdehyde dehydrogenase YP_001414757.1 3747676 D 402881 CDS YP_001414758.1 154253934 5453666 complement(3748692..3749459) 1 NC_009719.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc04054 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 3749459 5453666 Plav_3502 Parvibaculum lavamentivorans DS-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_001414758.1 3748692 R 402881 CDS YP_001414759.1 154253935 5454625 complement(3749483..3749953) 1 NC_009719.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: rfr:Rfer_4108 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 3749953 5454625 Plav_3503 Parvibaculum lavamentivorans DS-1 3-demethylubiquinone-9 3-methyltransferase YP_001414759.1 3749483 R 402881 CDS YP_001414760.1 154253936 5453891 complement(3750014..3750373) 1 NC_009719.1 PFAM: regulatory protein ArsR; KEGG: mes:Meso_2191 transcriptional regulator, ArsR family; regulatory protein ArsR 3750373 5453891 Plav_3504 Parvibaculum lavamentivorans DS-1 regulatory protein ArsR YP_001414760.1 3750014 R 402881 CDS YP_001414761.1 154253937 5455041 complement(3750431..3751828) 1 NC_009719.1 PFAM: FAD dependent oxidoreductase; KEGG: aav:Aave_4405 FAD dependent oxidoreductase; FAD dependent oxidoreductase 3751828 5455041 Plav_3505 Parvibaculum lavamentivorans DS-1 FAD dependent oxidoreductase YP_001414761.1 3750431 R 402881 CDS YP_001414762.1 154253938 5454259 complement(3751915..3752583) 1 NC_009719.1 PFAM: Intracellular septation protein A; KEGG: bov:BOV_1862 intracellular septation protein A; intracellular septation protein A 3752583 5454259 Plav_3506 Parvibaculum lavamentivorans DS-1 intracellular septation protein A YP_001414762.1 3751915 R 402881 CDS YP_001414763.1 154253939 5453711 3752710..3753777 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_5638 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3753777 5453711 Plav_3507 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001414763.1 3752710 D 402881 CDS YP_001414764.1 154253940 5453664 complement(3754035..3755951) 1 NC_009719.1 hypothetical protein 3755951 5453664 Plav_3508 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414764.1 3754035 R 402881 CDS YP_001414765.1 154253941 5455199 complement(3755948..3758722) 1 NC_009719.1 KEGG: cps:CPS_2955 hypothetical protein; exonuclease V subunit alpha 3758722 5455199 Plav_3509 Parvibaculum lavamentivorans DS-1 exonuclease V subunit alpha YP_001414765.1 3755948 R 402881 CDS YP_001414766.1 154253942 5453574 complement(3758806..3759822) 1 NC_009719.1 PFAM: Domain of unknown function DUF1814; KEGG: gbe:GbCGDNIH1_1177 hypothetical protein; hypothetical protein 3759822 5453574 Plav_3510 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414766.1 3758806 R 402881 CDS YP_001414767.1 154253943 5453369 complement(3759815..3760408) 1 NC_009719.1 KEGG: mlo:mll5901 hypothetical protein; hypothetical protein 3760408 5453369 Plav_3511 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414767.1 3759815 R 402881 CDS YP_001414768.1 154253944 5455145 3760649..3761611 1 NC_009719.1 PFAM: domain of unknown function DUF1738; KEGG: bbt:BBta_7394 putative ArdC antirestriction protein; hypothetical protein 3761611 5455145 Plav_3512 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414768.1 3760649 D 402881 CDS YP_001414769.1 154253945 5455191 3761773..3763893 1 NC_009719.1 PFAM: ParB domain protein nuclease; KEGG: pde:Pden_1541 ParB-like partition proteins; nuclease 3763893 5455191 Plav_3513 Parvibaculum lavamentivorans DS-1 nuclease YP_001414769.1 3761773 D 402881 CDS YP_001414770.1 154253946 5453562 3764024..3764440 1 NC_009719.1 KEGG: pde:Pden_1536 hypothetical protein; hypothetical protein 3764440 5453562 Plav_3514 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414770.1 3764024 D 402881 CDS YP_001414771.1 154253947 5454317 3764437..3764703 1 NC_009719.1 KEGG: mes:Meso_3821 hypothetical protein; hypothetical protein 3764703 5454317 Plav_3515 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414771.1 3764437 D 402881 CDS YP_001414772.1 154253948 5454329 3764700..3764996 1 NC_009719.1 KEGG: pde:Pden_1539 hypothetical protein; hypothetical protein 3764996 5454329 Plav_3516 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414772.1 3764700 D 402881 CDS YP_001414773.1 154253949 5453936 3765155..3769474 1 NC_009719.1 KEGG: pde:Pden_1533 probable methylase/helicase; putative methylase/helicase 3769474 5453936 Plav_3517 Parvibaculum lavamentivorans DS-1 putative methylase/helicase YP_001414773.1 3765155 D 402881 CDS YP_001414774.1 154253950 5454504 3769474..3770508 1 NC_009719.1 KEGG: bbt:BBta_7718 hypothetical protein; hypothetical protein 3770508 5454504 Plav_3518 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414774.1 3769474 D 402881 CDS YP_001414775.1 154253951 5454466 3770860..3771786 1 NC_009719.1 KEGG: pde:Pden_1531 hypothetical protein; hypothetical protein 3771786 5454466 Plav_3519 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414775.1 3770860 D 402881 CDS YP_001414776.1 154253952 5454445 3771873..3772127 1 NC_009719.1 KEGG: rle:pRL120075 putative plasmid stability protein StbC; putative plasmid stability protein StbC 3772127 5454445 Plav_3520 Parvibaculum lavamentivorans DS-1 putative plasmid stability protein StbC YP_001414776.1 3771873 D 402881 CDS YP_001414777.1 154253953 5454461 3772124..3772546 1 NC_009719.1 PFAM: PilT protein domain protein; KEGG: rle:pRL120076 putative plasmid stability protein StbB; PilT domain-containing protein 3772546 5454461 Plav_3521 Parvibaculum lavamentivorans DS-1 PilT domain-containing protein YP_001414777.1 3772124 D 402881 CDS YP_001414778.1 154253954 5453381 3772828..3772995 1 NC_009719.1 KEGG: mlo:msr9708 hypothetical protein; hypothetical protein 3772995 5453381 Plav_3522 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414778.1 3772828 D 402881 CDS YP_001414779.1 154253955 5454622 3773130..3773570 1 NC_009719.1 KEGG: nwi:Nwi_2132 hypothetical protein; hypothetical protein 3773570 5454622 Plav_3523 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414779.1 3773130 D 402881 CDS YP_001414780.1 154253956 5456756 3774107..3774469 1 NC_009719.1 PFAM: protein of unknown function DUF736; KEGG: mlo:mlr9738 hypothetical protein; hypothetical protein 3774469 5456756 Plav_3524 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414780.1 3774107 D 402881 CDS YP_001414781.1 154253957 5456780 complement(3774477..3774632) 1 NC_009719.1 hypothetical protein 3774632 5456780 Plav_3525 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414781.1 3774477 R 402881 CDS YP_001414782.1 154253958 5456498 3774777..3775043 1 NC_009719.1 KEGG: mes:Meso_0528 transcriptional regulator, XRE family; XRE family transcriptional regulator 3775043 5456498 Plav_3526 Parvibaculum lavamentivorans DS-1 XRE family transcriptional regulator YP_001414782.1 3774777 D 402881 CDS YP_001414783.1 154253959 5456442 3775140..3775400 1 NC_009719.1 KEGG: mes:Meso_0527 hypothetical protein; hypothetical protein 3775400 5456442 Plav_3527 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414783.1 3775140 D 402881 CDS YP_001414784.1 154253960 5455467 3775762..3776292 1 NC_009719.1 KEGG: pde:Pden_3174 hypothetical protein; hypothetical protein 3776292 5455467 Plav_3529 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414784.1 3775762 D 402881 CDS YP_001414785.1 154253961 5456383 3776429..3776710 1 NC_009719.1 KEGG: pde:Pden_1513 hypothetical protein; hypothetical protein 3776710 5456383 Plav_3530 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414785.1 3776429 D 402881 CDS YP_001414786.1 154253962 5456256 3776729..3777889 1 NC_009719.1 KEGG: pde:Pden_1512 replication protein A; replication protein A 3777889 5456256 Plav_3531 Parvibaculum lavamentivorans DS-1 replication protein A YP_001414786.1 3776729 D 402881 CDS YP_001414787.1 154253963 5456142 3777886..3778539 1 NC_009719.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mes:Meso_2336 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 3778539 5456142 Plav_3532 Parvibaculum lavamentivorans DS-1 cobyrinic acid ac-diamide synthase YP_001414787.1 3777886 D 402881 CDS YP_001414788.1 154253964 5455762 3778536..3778787 1 NC_009719.1 KEGG: bja:bsl0049 hypothetical protein; hypothetical protein 3778787 5455762 Plav_3533 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414788.1 3778536 D 402881 CDS YP_001414789.1 154253965 5455715 3778784..3779305 1 NC_009719.1 KEGG: bbt:BBta_7734 hypothetical protein; hypothetical protein 3779305 5455715 Plav_3534 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414789.1 3778784 D 402881 CDS YP_001414790.1 154253966 5455781 3779302..3779847 1 NC_009719.1 KEGG: mes:Meso_2333 conjugal transfer protein precursor; conjugal transfer protein 3779847 5455781 Plav_3535 Parvibaculum lavamentivorans DS-1 conjugal transfer protein YP_001414790.1 3779302 D 402881 CDS YP_001414791.1 154253967 5455047 3779844..3780263 1 NC_009719.1 PFAM: protein of unknown function DUF736; KEGG: bbt:BBta_7736 hypothetical protein; hypothetical protein 3780263 5455047 Plav_3536 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414791.1 3779844 D 402881 CDS YP_001414792.1 154253968 5455617 3780267..3781046 1 NC_009719.1 PFAM: Lytic transglycosylase catalytic; KEGG: pde:Pden_3185 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 3781046 5455617 Plav_3537 Parvibaculum lavamentivorans DS-1 lytic transglycosylase catalytic subunit YP_001414792.1 3780267 D 402881 CDS YP_001414793.1 154253969 5455481 3781290..3783029 1 NC_009719.1 KEGG: pde:Pden_1507 hypothetical protein; hypothetical protein 3783029 5455481 Plav_3538 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414793.1 3781290 D 402881 CDS YP_001414794.1 154253970 5455277 3783056..3785047 1 NC_009719.1 type IV secretion VirD4 coupling protein family; conjugal transfer coupling protein TraG 3785047 5455277 Plav_3539 Parvibaculum lavamentivorans DS-1 conjugal transfer coupling protein TraG YP_001414794.1 3783056 D 402881 CDS YP_001414795.1 154253971 5454381 3785052..3785501 1 NC_009719.1 KEGG: bja:bll0042 hypothetical protein; hypothetical protein 3785501 5454381 Plav_3540 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414795.1 3785052 D 402881 CDS YP_001414796.1 154253972 5456889 3785670..3786653 1 NC_009719.1 TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: mes:Meso_2324 type II secretion system protein E; P-type conjugative transfer ATPase TrbB 3786653 5456889 Plav_3541 Parvibaculum lavamentivorans DS-1 P-type conjugative transfer ATPase TrbB YP_001414796.1 3785670 D 402881 CDS YP_001414797.1 154253973 5455234 3786650..3786982 1 NC_009719.1 PFAM: Conjugal transfer protein TrbC; KEGG: pde:Pden_1483 conjugal transfer protein TrbC; conjugal transfer protein TrbC 3786982 5455234 Plav_3542 Parvibaculum lavamentivorans DS-1 conjugal transfer protein TrbC YP_001414797.1 3786650 D 402881 CDS YP_001414798.1 154253974 5454073 3786982..3787263 1 NC_009719.1 KEGG: mlo:mll9611 conjugal transfer protein trbB; conjugal transfer protein TrbB 3787263 5454073 Plav_3543 Parvibaculum lavamentivorans DS-1 conjugal transfer protein TrbB YP_001414798.1 3786982 D 402881 CDS YP_001414799.1 154253975 5453542 3787278..3789728 1 NC_009719.1 type IV secretion system VirB4 family; conjugal transfer ATPase TrbE 3789728 5453542 Plav_3544 Parvibaculum lavamentivorans DS-1 conjugal transfer ATPase TrbE YP_001414799.1 3787278 D 402881 CDS YP_001414800.1 154253976 5455654 3789734..3790513 1 NC_009719.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: pde:Pden_1480 conjugal transfer protein TrbJ; conjugal transfer protein TrbJ 3790513 5455654 Plav_3545 Parvibaculum lavamentivorans DS-1 conjugal transfer protein TrbJ YP_001414800.1 3789734 D 402881 CDS YP_001414801.1 154253977 5456885 3790524..3790808 1 NC_009719.1 KEGG: mes:Meso_2319 hypothetical protein; hypothetical protein 3790808 5456885 Plav_3546 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414801.1 3790524 D 402881 CDS YP_001414802.1 154253978 5453584 3790812..3792173 1 NC_009719.1 type IV secretion VirB6 family; conjugal transfer protein TrbL 3792173 5453584 Plav_3547 Parvibaculum lavamentivorans DS-1 conjugal transfer protein TrbL YP_001414802.1 3790812 D 402881 CDS YP_001414803.1 154253979 5453870 3792170..3792859 1 NC_009719.1 PFAM: Conjugal transfer protein; KEGG: mes:Meso_0502 conjugal transfer protein; conjugal transfer protein TrbF 3792859 5453870 Plav_3548 Parvibaculum lavamentivorans DS-1 conjugal transfer protein TrbF YP_001414803.1 3792170 D 402881 CDS YP_001414804.1 154253980 5454360 3792856..3793836 1 NC_009719.1 TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: mes:Meso_0501 conjugal transfer protein TrbG/VirB9/CagX; P-type conjugative transfer protein TrbG 3793836 5454360 Plav_3549 Parvibaculum lavamentivorans DS-1 P-type conjugative transfer protein TrbG YP_001414804.1 3792856 D 402881 CDS YP_001414805.1 154253981 5455167 3793833..3795017 1 NC_009719.1 PFAM: conjugation TrbI family protein; KEGG: mes:Meso_0500 conjugation TrbI-like protein; conjugation TrbI family protein 3795017 5455167 Plav_3550 Parvibaculum lavamentivorans DS-1 conjugation TrbI family protein YP_001414805.1 3793833 D 402881 CDS YP_001414806.1 154253982 5454072 3795019..3795258 1 NC_009719.1 KEGG: gbe:GbCGDNIH1_1065 hypothetical protein; hypothetical protein 3795258 5454072 Plav_3551 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414806.1 3795019 D 402881 CDS YP_001414807.1 154253983 5454923 complement(3795253..3796146) 1 NC_009719.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pde:Pden_3205 transcriptional regulator, LysR family; LysR family transcriptional regulator 3796146 5454923 Plav_3552 Parvibaculum lavamentivorans DS-1 LysR family transcriptional regulator YP_001414807.1 3795253 R 402881 CDS YP_001414808.1 154253984 5453961 3796243..3796623 1 NC_009719.1 TIGRFAM: DNA binding domain, excisionase family; PFAM: Prophage CP4-57 regulatory; KEGG: vei:Veis_2614 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA 3796623 5453961 Plav_3553 Parvibaculum lavamentivorans DS-1 phage transcriptional regulator AlpA YP_001414808.1 3796243 D 402881 CDS YP_001414809.1 154253985 5454055 3796620..3797117 1 NC_009719.1 KEGG: dno:DNO_0182 conserved hypothetical protein VrlJ; hypothetical protein 3797117 5454055 Plav_3554 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414809.1 3796620 D 402881 CDS YP_001414810.1 154253986 5454183 3797139..3800879 1 NC_009719.1 KEGG: ace:Acel_0812 hypothetical protein; hypothetical protein 3800879 5454183 Plav_3555 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414810.1 3797139 D 402881 CDS YP_001414811.1 154253987 5454016 3800884..3802746 1 NC_009719.1 PFAM: AAA-4 family protein; KEGG: mbu:Mbur_0482 divergent AAA ATP; putative transcriptional regulator 3802746 5454016 Plav_3556 Parvibaculum lavamentivorans DS-1 putative transcriptional regulator YP_001414811.1 3800884 D 402881 CDS YP_001414812.1 154253988 5454629 3802736..3804625 1 NC_009719.1 KEGG: chu:CHU_1497 conserved hypothetical protein; possible histidine kinase; hypothetical protein 3804625 5454629 Plav_3557 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414812.1 3802736 D 402881 CDS YP_001414813.1 154253989 5455600 3804643..3807405 1 NC_009719.1 KEGG: ace:Acel_0814 hypothetical protein; hypothetical protein 3807405 5455600 Plav_3558 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414813.1 3804643 D 402881 CDS YP_001414814.1 154253990 5456874 3807409..3810234 1 NC_009719.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: ace:Acel_0816 helicase domain protein; helicase domain-containing protein 3810234 5456874 Plav_3559 Parvibaculum lavamentivorans DS-1 helicase domain-containing protein YP_001414814.1 3807409 D 402881 CDS YP_001414815.1 154253991 5456792 3810231..3812267 1 NC_009719.1 PFAM: PglZ domain protein; KEGG: dno:DNO_0176 conserved hypothetical protein VrlP; alkaline phosphatase domain-containing protein 3812267 5456792 Plav_3560 Parvibaculum lavamentivorans DS-1 alkaline phosphatase domain-containing protein YP_001414815.1 3810231 D 402881 CDS YP_001414816.1 154253992 5456529 3812275..3812997 1 NC_009719.1 KEGG: dno:DNO_0175 conserved hypothetical protein VrlQ; hypothetical protein 3812997 5456529 Plav_3561 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414816.1 3812275 D 402881 CDS YP_001414817.1 154253993 5456987 3813161..3813445 1 NC_009719.1 PFAM: Prophage CP4-57 regulatory; KEGG: rpa:RPA2205 hypothetical protein; phage transcriptional regulator AlpA 3813445 5456987 Plav_3562 Parvibaculum lavamentivorans DS-1 phage transcriptional regulator AlpA YP_001414817.1 3813161 D 402881 CDS YP_001414818.1 154253994 5456842 complement(3813423..3814679) 1 NC_009719.1 PFAM: integrase family protein; KEGG: rpa:RPA2204 integrase; integrase family protein 3814679 5456842 Plav_3563 Parvibaculum lavamentivorans DS-1 integrase family protein YP_001414818.1 3813423 R 402881 CDS YP_001414819.1 154253995 5455187 complement(3815129..3815572) 1 NC_009719.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: pde:Pden_4050 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase 3815572 5455187 Plav_3564 Parvibaculum lavamentivorans DS-1 isoprenylcysteine carboxyl methyltransferase YP_001414819.1 3815129 R 402881 CDS YP_001414820.1 154253996 5456657 complement(3815626..3816123) 1 NC_009719.1 PFAM: regulatory protein MarR; KEGG: bha:BH2061 transcriptional regulator (MarR family); MarR family transcriptional regulator 3816123 5456657 Plav_3565 Parvibaculum lavamentivorans DS-1 MarR family transcriptional regulator YP_001414820.1 3815626 R 402881 CDS YP_001414821.1 154253997 5457026 3816253..3816933 1 NC_009719.1 KEGG: mes:Meso_4022 protein of unknown function DUF540; hypothetical protein 3816933 5457026 Plav_3566 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414821.1 3816253 D 402881 CDS YP_001414822.1 154253998 5456996 3816941..3817312 1 NC_009719.1 KEGG: acr:Acry_2024 hypothetical protein; hypothetical protein 3817312 5456996 Plav_3567 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414822.1 3816941 D 402881 CDS YP_001414823.1 154253999 5456730 complement(3817309..3817953) 1 NC_009719.1 KEGG: sal:Sala_2745 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; endonuclease III 3817953 5456730 Plav_3568 Parvibaculum lavamentivorans DS-1 endonuclease III YP_001414823.1 3817309 R 402881 CDS YP_001414824.1 154254000 5455795 3818034..3818540 1 NC_009719.1 KEGG: bja:bll0688 hypothetical protein; hypothetical protein 3818540 5455795 Plav_3569 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414824.1 3818034 D 402881 CDS YP_001414825.1 154254001 5454031 complement(3818534..3819166) 1 NC_009719.1 catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 3819166 5454031 Plav_3570 Parvibaculum lavamentivorans DS-1 phosphoglyceromutase YP_001414825.1 3818534 R 402881 CDS YP_001414826.1 154254002 5456373 complement(3819195..3820010) 1 NC_009719.1 PFAM: dihydrodipicolinate reductase; KEGG: rle:RL0180 putative dihydrodipicolinate reductase; dihydrodipicolinate reductase 3820010 5456373 Plav_3571 Parvibaculum lavamentivorans DS-1 dihydrodipicolinate reductase YP_001414826.1 3819195 R 402881 CDS YP_001414827.1 154254003 5456584 complement(3820053..3820397) 1 NC_009719.1 PFAM: protein of unknown function DUF486; KEGG: sme:SMc04230 hypothetical transmembrane signal peptide protein; hypothetical protein 3820397 5456584 Plav_3572 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414827.1 3820053 R 402881 CDS YP_001414828.1 154254004 5457030 complement(3820464..3821621) 1 NC_009719.1 TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: sme:SMc02858 probable chaperone protein; chaperone protein DnaJ 3821621 5457030 Plav_3573 Parvibaculum lavamentivorans DS-1 chaperone protein DnaJ YP_001414828.1 3820464 R 402881 CDS YP_001414829.1 154254005 5456859 complement(3821719..3823638) 1 NC_009719.1 TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; KEGG: sme:SMc02857 heat shock protein 70 (HSP70) chaperone; chaperone protein DnaK 3823638 5456859 Plav_3574 Parvibaculum lavamentivorans DS-1 chaperone protein DnaK YP_001414829.1 3821719 R 402881 CDS YP_001414830.1 154254006 5457044 complement(3823953..3824504) 1 NC_009719.1 PFAM: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 3824504 5457044 Plav_3575 Parvibaculum lavamentivorans DS-1 Sel1 domain-containing protein YP_001414830.1 3823953 R 402881 CDS YP_001414831.1 154254007 5456276 3824567..3825232 1 NC_009719.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: rle:RL0039 putative alkylated DNA repair protein; 2OG-Fe(II) oxygenase 3825232 5456276 Plav_3576 Parvibaculum lavamentivorans DS-1 2OG-Fe(II) oxygenase YP_001414831.1 3824567 D 402881 CDS YP_001414832.1 154254008 5456583 complement(3825229..3825933) 1 NC_009719.1 PFAM: NnrUfamily protein; KEGG: mca:MCA0498 hypothetical protein; NnrU family protein 3825933 5456583 Plav_3577 Parvibaculum lavamentivorans DS-1 NnrU family protein YP_001414832.1 3825229 R 402881 CDS YP_001414833.1 154254009 5456578 complement(3826012..3826653) 1 NC_009719.1 PFAM: GrpE protein; KEGG: bov:BOV_0165 heat shock protein GrpE; GrpE protein HSP-70 cofactor 3826653 5456578 Plav_3578 Parvibaculum lavamentivorans DS-1 GrpE protein HSP-70 cofactor YP_001414833.1 3826012 R 402881 CDS YP_001414834.1 154254010 5457033 complement(3826744..3827808) 1 NC_009719.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 3827808 hrcA 5457033 hrcA Parvibaculum lavamentivorans DS-1 heat-inducible transcription repressor YP_001414834.1 3826744 R 402881 CDS YP_001414835.1 154254011 5456852 3827982..3828698 1 NC_009719.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 3828698 rph 5456852 rph Parvibaculum lavamentivorans DS-1 ribonuclease PH YP_001414835.1 3827982 D 402881 CDS YP_001414836.1 154254012 5456640 3828695..3829300 1 NC_009719.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 3829300 5456640 Plav_3581 Parvibaculum lavamentivorans DS-1 putative deoxyribonucleotide triphosphate pyrophosphatase YP_001414836.1 3828695 D 402881 CDS YP_001414837.1 154254013 5456849 3829281..3830438 1 NC_009719.1 KEGG: mlo:mlr4627 oxygen-independent coproporphyrinogen III oxidase (hemN); TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; putative oxygen-independent coproporphyrinogen III oxidase 3830438 5456849 Plav_3582 Parvibaculum lavamentivorans DS-1 putative oxygen-independent coproporphyrinogen III oxidase YP_001414837.1 3829281 D 402881 CDS YP_001414838.1 154254014 5456660 complement(3830435..3831088) 1 NC_009719.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: pde:Pden_0174 maleylacetoacetate isomerase; maleylacetoacetate isomerase 3831088 5456660 Plav_3583 Parvibaculum lavamentivorans DS-1 maleylacetoacetate isomerase YP_001414838.1 3830435 R 402881 CDS YP_001414839.1 154254015 5457017 complement(3831089..3832330) 1 NC_009719.1 PFAM: Extracellular ligand-binding receptor; KEGG: mmr:Mmar10_3012 ABC-type branched-chain amino acid transport systems, periplasmic component; extracellular ligand-binding receptor 3832330 5457017 Plav_3584 Parvibaculum lavamentivorans DS-1 extracellular ligand-binding receptor YP_001414839.1 3831089 R 402881 CDS YP_001414840.1 154254016 5456490 3832488..3833363 1 NC_009719.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rpe:RPE_0357 protein of unknown function UPF0011; uroporphyrin-III C/tetrapyrrole methyltransferase 3833363 5456490 Plav_3585 Parvibaculum lavamentivorans DS-1 uroporphyrin-III C/tetrapyrrole methyltransferase YP_001414840.1 3832488 D 402881 CDS YP_001414841.1 154254017 5456697 3833360..3833761 1 NC_009719.1 PFAM: protein of unknown function UPF0102; KEGG: bra:BRADO0179 hypothetical protein; hypothetical protein 3833761 5456697 Plav_3586 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414841.1 3833360 D 402881 CDS YP_001414842.1 154254018 5455236 3833824..3834399 1 NC_009719.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: mag:amb4504 predicted periplasmic or secreted lipoprotein; transport-associated protein 3834399 5455236 Plav_3587 Parvibaculum lavamentivorans DS-1 transport-associated protein YP_001414842.1 3833824 D 402881 CDS YP_001414843.1 154254019 5453827 3834459..3835322 1 NC_009719.1 KEGG: swi:Swit_1164 hypothetical protein; hypothetical protein 3835322 5453827 Plav_3588 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414843.1 3834459 D 402881 CDS YP_001414844.1 154254020 5455146 3835419..3836357 1 NC_009719.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 3836357 5455146 Plav_3589 Parvibaculum lavamentivorans DS-1 glutathione synthetase YP_001414844.1 3835419 D 402881 CDS YP_001414845.1 154254021 5455344 complement(3836376..3836639) 1 NC_009719.1 hypothetical protein 3836639 5455344 Plav_3590 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414845.1 3836376 R 402881 CDS YP_001414846.1 154254022 5454997 3836725..3838011 1 NC_009719.1 PFAM: peptidase M19 renal dipeptidase; KEGG: sus:Acid_3699 membrane dipeptidase; membrane dipeptidase 3838011 5454997 Plav_3591 Parvibaculum lavamentivorans DS-1 membrane dipeptidase YP_001414846.1 3836725 D 402881 CDS YP_001414847.1 154254023 5455247 3838099..3838866 1 NC_009719.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mlo:mlr2805 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 3838866 5455247 Plav_3592 Parvibaculum lavamentivorans DS-1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001414847.1 3838099 D 402881 CDS YP_001414848.1 154254024 5453722 3838913..3839884 1 NC_009719.1 KEGG: sfu:Sfum_1249 hypothetical protein; hypothetical protein 3839884 5453722 Plav_3593 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414848.1 3838913 D 402881 CDS YP_001414849.1 154254025 5453697 3839986..3841536 1 NC_009719.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mes:Meso_3583 Mg chelatase, subunit ChlI; Mg chelatase subunit ChlI 3841536 5453697 Plav_3594 Parvibaculum lavamentivorans DS-1 Mg chelatase subunit ChlI YP_001414849.1 3839986 D 402881 CDS YP_001414850.1 154254026 5455148 3841650..3843884 1 NC_009719.1 KEGG: rpc:RPC_0315 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase 3843884 5455148 Plav_3595 Parvibaculum lavamentivorans DS-1 PAS/PAC sensor hybrid histidine kinase YP_001414850.1 3841650 D 402881 CDS YP_001414851.1 154254027 5453611 3843926..3845362 1 NC_009719.1 PFAM: major facilitator superfamily MFS_1; KEGG: tbd:Tbd_0253 putative transport transmembrane protein; major facilitator superfamily transporter 3845362 5453611 Plav_3596 Parvibaculum lavamentivorans DS-1 major facilitator superfamily transporter YP_001414851.1 3843926 D 402881 CDS YP_001414852.1 154254028 5454060 3845473..3846498 1 NC_009719.1 KEGG: rpa:RPA0316 hypothetical protein; hypothetical protein 3846498 5454060 Plav_3597 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414852.1 3845473 D 402881 CDS YP_001414853.1 154254029 5453617 complement(3846511..3848775) 1 NC_009719.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 3848775 5453617 Plav_3598 Parvibaculum lavamentivorans DS-1 malic enzyme YP_001414853.1 3846511 R 402881 CDS YP_001414854.1 154254030 5453736 3848991..3851717 1 NC_009719.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: bms:BR0147 DNA mismatch repair protein MutS; DNA mismatch repair protein MutS 3851717 5453736 Plav_3599 Parvibaculum lavamentivorans DS-1 DNA mismatch repair protein MutS YP_001414854.1 3848991 D 402881 CDS YP_001414855.1 154254031 5454293 complement(3851912..3852793) 1 NC_009719.1 PFAM: Methyltransferase type 11; KEGG: sfu:Sfum_3345 hypothetical protein; type 11 methyltransferase 3852793 5454293 Plav_3600 Parvibaculum lavamentivorans DS-1 type 11 methyltransferase YP_001414855.1 3851912 R 402881 CDS YP_001414856.1 154254032 5454064 complement(3852771..3853082) 1 NC_009719.1 hypothetical protein 3853082 5454064 Plav_3601 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414856.1 3852771 R 402881 CDS YP_001414857.1 154254033 5454956 3853312..3856107 1 NC_009719.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 3856107 5454956 Plav_3602 Parvibaculum lavamentivorans DS-1 PII uridylyl-transferase YP_001414857.1 3853312 D 402881 CDS YP_001414858.1 154254034 5454776 complement(3856208..3856738) 1 NC_009719.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; plasmid stabilization system; KEGG: gsu:GSU2439 RelE protein; prevent-host-death family protein 3856738 5454776 Plav_3603 Parvibaculum lavamentivorans DS-1 prevent-host-death family protein YP_001414858.1 3856208 R 402881 CDS YP_001414859.1 154254035 5453731 3856964..3858502 1 NC_009719.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: mag:amb4409 uncharacterized membrane protein, putative virulence factor; integral membrane protein MviN 3858502 5453731 Plav_3604 Parvibaculum lavamentivorans DS-1 integral membrane protein MviN YP_001414859.1 3856964 D 402881 CDS YP_001414860.1 154254036 5453753 3858529..3860361 1 NC_009719.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pmy:Pmen_4041 integral membrane sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase 3860361 5453753 Plav_3605 Parvibaculum lavamentivorans DS-1 integral membrane sensor hybrid histidine kinase YP_001414860.1 3858529 D 402881 CDS YP_001414861.1 154254037 5455066 complement(3860365..3860991) 1 NC_009719.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: pde:Pden_4349 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 3860991 5455066 Plav_3606 Parvibaculum lavamentivorans DS-1 two component LuxR family transcriptional regulator YP_001414861.1 3860365 R 402881 CDS YP_001414862.1 154254038 5454167 3861143..3865144 1 NC_009719.1 TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Autotransporter beta- domain protein; KEGG: bam:Bamb_4364 outer membrane autotransporter barrel domain; outer membrane autotransporter 3865144 5454167 Plav_3607 Parvibaculum lavamentivorans DS-1 outer membrane autotransporter YP_001414862.1 3861143 D 402881 CDS YP_001414863.1 154254039 5453389 3865483..3866490 1 NC_009719.1 TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; KEGG: nha:Nham_0012 tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase 3866490 5453389 Plav_3608 Parvibaculum lavamentivorans DS-1 tryptophanyl-tRNA synthetase YP_001414863.1 3865483 D 402881 CDS YP_001414864.1 154254040 5453671 3866581..3867648 1 NC_009719.1 KEGG: mag:amb4407 hypothetical protein; hypothetical protein 3867648 5453671 Plav_3609 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414864.1 3866581 D 402881 CDS YP_001414865.1 154254041 5454515 3867703..3868209 1 NC_009719.1 PFAM: UspA domain protein; KEGG: rle:RL0401 putative universal stress protein; UspA domain-containing protein 3868209 5454515 Plav_3610 Parvibaculum lavamentivorans DS-1 UspA domain-containing protein YP_001414865.1 3867703 D 402881 CDS YP_001414866.1 154254042 5454118 3868245..3868850 1 NC_009719.1 PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: sit:TM1040_3091 nitrogen-fixing NifU-like; scaffold protein Nfu/NifU 3868850 5454118 Plav_3611 Parvibaculum lavamentivorans DS-1 scaffold protein Nfu/NifU YP_001414866.1 3868245 D 402881 CDS YP_001414867.1 154254043 5453474 3868953..3869546 1 NC_009719.1 PFAM: nitroreductase; KEGG: ecs:ECs1254 putative enzyme; hypothetical protein 3869546 5453474 Plav_3612 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414867.1 3868953 D 402881 CDS YP_001414868.1 154254044 5456234 3869564..3870256 1 NC_009719.1 PFAM: peptidase M22 glycoprotease; KEGG: glycoprotease family protein; peptidase M22 glycoprotease 3870256 5456234 Plav_3613 Parvibaculum lavamentivorans DS-1 peptidase M22 glycoprotease YP_001414868.1 3869564 D 402881 CDS YP_001414869.1 154254045 5456702 3870280..3870738 1 NC_009719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bov:BOV_2064 ribosomal-protein-alanine acetyltransferase; N-acetyltransferase GCN5 3870738 5456702 Plav_3614 Parvibaculum lavamentivorans DS-1 N-acetyltransferase GCN5 YP_001414869.1 3870280 D 402881 CDS YP_001414870.1 154254046 5454283 3870848..3871354 1 NC_009719.1 PFAM: ferric-uptake regulator; KEGG: mmr:Mmar10_3031 ferric uptake regulator, Fur family; ferric uptake regulator family protein 3871354 5454283 Plav_3615 Parvibaculum lavamentivorans DS-1 ferric uptake regulator family protein YP_001414870.1 3870848 D 402881 CDS YP_001414871.1 154254047 5454954 3871395..3872261 1 NC_009719.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: bmb:BruAb1_2126 acyltransferase, hypothetical; phospholipid/glycerol acyltransferase 3872261 5454954 Plav_3616 Parvibaculum lavamentivorans DS-1 phospholipid/glycerol acyltransferase YP_001414871.1 3871395 D 402881 CDS YP_001414872.1 154254048 5454919 3872381..3873784 1 NC_009719.1 KEGG: ret:RHE_CH00376 putative 2-methylthioadenine synthetase (MiaB-like) protein; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; RNA modification protein 3873784 5454919 Plav_3617 Parvibaculum lavamentivorans DS-1 RNA modification protein YP_001414872.1 3872381 D 402881 CDS YP_001414873.1 154254049 5455155 3873838..3874866 1 NC_009719.1 PFAM: PhoH family protein; KEGG: sme:SMc01114 hypothetical PHOH-like protein; PhoH family protein 3874866 5455155 Plav_3618 Parvibaculum lavamentivorans DS-1 PhoH family protein YP_001414873.1 3873838 D 402881 CDS YP_001414874.1 154254050 5453370 3874863..3875420 1 NC_009719.1 PFAM: protein of unknown function UPF0054; KEGG: mag:amb4465 predicted metal-dependent hydrolase; hypothetical protein 3875420 5453370 Plav_3619 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414874.1 3874863 D 402881 CDS YP_001414875.1 154254051 5453614 3875430..3876389 1 NC_009719.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: rru:Rru_A3773 CBS domain protein; hypothetical protein 3876389 5453614 Plav_3620 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414875.1 3875430 D 402881 CDS YP_001414876.1 154254052 5454012 3876393..3878066 1 NC_009719.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rpd:RPD_0238 apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 3878066 5454012 Plav_3621 Parvibaculum lavamentivorans DS-1 apolipoprotein N-acyltransferase YP_001414876.1 3876393 D 402881 CDS YP_001414877.1 154254053 5453766 3878193..3878636 1 NC_009719.1 PFAM: helix-turn-helix domain protein; KEGG: sme:SMc01110 DNA-binding protein; XRE family transcriptional regulator 3878636 5453766 Plav_3622 Parvibaculum lavamentivorans DS-1 XRE family transcriptional regulator YP_001414877.1 3878193 D 402881 CDS YP_001414878.1 154254054 5456858 3878862..3880031 1 NC_009719.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 3880031 5456858 Plav_3623 Parvibaculum lavamentivorans DS-1 S-adenosylmethionine synthetase YP_001414878.1 3878862 D 402881 CDS YP_001414879.1 154254055 5456501 3880061..3880786 1 NC_009719.1 TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase; KEGG: bbt:BBta_0053 tRNA (guanine-N(7)-)-methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 3880786 5456501 Plav_3624 Parvibaculum lavamentivorans DS-1 tRNA (guanine-N(7)-)-methyltransferase YP_001414879.1 3880061 D 402881 CDS YP_001414880.1 154254056 5456960 3880944..3881567 1 NC_009719.1 PFAM: protein of unknown function DUF150; KEGG: jan:Jann_0041 protein of unknown function DUF150; hypothetical protein 3881567 5456960 Plav_3625 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414880.1 3880944 D 402881 CDS YP_001414881.1 154254057 5455837 3881572..3883182 1 NC_009719.1 TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH type 1 domain protein; NusA domain protein; SMART: KH domain protein; KEGG: sme:SMc02912 probable N utilization substance protein A; NusA antitermination factor 3883182 5455837 Plav_3626 Parvibaculum lavamentivorans DS-1 NusA antitermination factor YP_001414881.1 3881572 D 402881 CDS YP_001414882.1 154254058 5456635 3883166..3883849 1 NC_009719.1 PFAM: protein of unknown function DUF448; KEGG: pde:Pden_2593 protein of unknown function DUF448; hypothetical protein 3883849 5456635 Plav_3627 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414882.1 3883166 D 402881 CDS YP_001414883.1 154254059 5455820 3883880..3886543 1 NC_009719.1 TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; GTP-binding protein HSR1-related; elongation factor Tu domain 2 protein; translation initiation factor IF-2 domain protein; Initiation factor 2 associated domain protein; KEGG: rpb:RPB_0600 translation initiation factor IF-2; translation initiation factor IF-2 3886543 5455820 Plav_3628 Parvibaculum lavamentivorans DS-1 translation initiation factor IF-2 YP_001414883.1 3883880 D 402881 CDS YP_001414884.1 154254060 5453496 3886606..3887028 1 NC_009719.1 PFAM: ribosome-binding factor A; KEGG: mag:amb4070 ribosome-binding factor A; ribosome-binding factor A 3887028 5453496 Plav_3629 Parvibaculum lavamentivorans DS-1 ribosome-binding factor A YP_001414884.1 3886606 D 402881 CDS YP_001414885.1 154254061 5454704 3887033..3887956 1 NC_009719.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: bbt:BBta_0059 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B 3887956 5454704 Plav_3630 Parvibaculum lavamentivorans DS-1 tRNA pseudouridine synthase B YP_001414885.1 3887033 D 402881 CDS YP_001414886.1 154254062 5454737 3887967..3888236 1 NC_009719.1 PFAM: ribosomal protein S15; KEGG: sme:SMc00323 30S ribosomal protein S15; 30S ribosomal protein S15 3888236 5454737 Plav_3631 Parvibaculum lavamentivorans DS-1 30S ribosomal protein S15 YP_001414886.1 3887967 D 402881 CDS YP_001414887.1 154254063 5454738 3888557..3890743 1 NC_009719.1 PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; SMART: KH domain protein; KEGG: mes:Meso_3935 3' exoribonuclease; polynucleotide phosphorylase/polyadenylase 3890743 5454738 Plav_3632 Parvibaculum lavamentivorans DS-1 polynucleotide phosphorylase/polyadenylase YP_001414887.1 3888557 D 402881 CDS YP_001414888.1 154254064 5454082 3890815..3891438 1 NC_009719.1 KEGG: swi:Swit_3433 hypothetical protein; hypothetical protein 3891438 5454082 Plav_3633 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414888.1 3890815 D 402881 CDS YP_001414889.1 154254065 5453787 complement(3891445..3892311) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr0771 enoyl-(acyl carrier protein) reductase; short-chain dehydrogenase/reductase SDR 3892311 5453787 Plav_3634 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001414889.1 3891445 R 402881 CDS YP_001414890.1 154254066 5457042 complement(3892381..3893607) 1 NC_009719.1 PFAM: Beta-ketoacyl synthase; KEGG: rpd:RPD_0221 beta-ketoacyl synthase; beta-ketoacyl synthase 3893607 5457042 Plav_3635 Parvibaculum lavamentivorans DS-1 beta-ketoacyl synthase YP_001414890.1 3892381 R 402881 CDS YP_001414891.1 154254067 5453846 complement(3893694..3894212) 1 NC_009719.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 3894212 5453846 Plav_3636 Parvibaculum lavamentivorans DS-1 3-hydroxydecanoyl-ACP dehydratase YP_001414891.1 3893694 R 402881 CDS YP_001414892.1 154254068 5454583 3894492..3894923 1 NC_009719.1 PFAM: ferric-uptake regulator; KEGG: mag:amb4306 Fe2+/Zn2+ uptake regulation protein; ferric uptake regulator family protein 3894923 5454583 Plav_3637 Parvibaculum lavamentivorans DS-1 ferric uptake regulator family protein YP_001414892.1 3894492 D 402881 CDS YP_001414893.1 154254069 5453723 3895184..3895606 1 NC_009719.1 PFAM: Rubrerythrin; KEGG: pub:SAR11_0399 rubrerythrin; rubrerythrin 3895606 5453723 Plav_3638 Parvibaculum lavamentivorans DS-1 rubrerythrin YP_001414893.1 3895184 D 402881 CDS YP_001414894.1 154254070 5454300 3895700..3897070 1 NC_009719.1 KEGG: pub:SAR11_0400 anaerobic glycerol-3-phosphate dehydrogenase subunit C; anaerobic glycerol-3-phosphate dehydrogenase subunit C 3897070 5454300 Plav_3639 Parvibaculum lavamentivorans DS-1 anaerobic glycerol-3-phosphate dehydrogenase subunit C YP_001414894.1 3895700 D 402881 CDS YP_001414895.1 154254071 5454920 3897088..3897681 1 NC_009719.1 KEGG: pub:SAR11_0401 hypothetical protein; hypothetical protein 3897681 5454920 Plav_3640 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414895.1 3897088 D 402881 CDS YP_001414896.1 154254072 5454446 complement(3897688..3899148) 1 NC_009719.1 PFAM: sulfatase; KEGG: bmb:BruAb2_1121 sulfatase; sulfatase 3899148 5454446 Plav_3641 Parvibaculum lavamentivorans DS-1 sulfatase YP_001414896.1 3897688 R 402881 CDS YP_001414897.1 154254073 5454160 complement(3899150..3899749) 1 NC_009719.1 PFAM: protein of unknown function DUF1058; KEGG: mlo:mll5573 hypothetical protein; hypothetical protein 3899749 5454160 Plav_3642 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414897.1 3899150 R 402881 CDS YP_001414898.1 154254074 5456969 3899882..3900874 1 NC_009719.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: hne:HNE_3433 glyoxylate reductase; glyoxylate reductase 3900874 5456969 Plav_3643 Parvibaculum lavamentivorans DS-1 glyoxylate reductase YP_001414898.1 3899882 D 402881 CDS YP_001414899.1 154254075 5455099 complement(3901031..3901354) 1 NC_009719.1 KEGG: cbu:CBUA0027 DNA-binding protein; DNA-binding protein 3901354 5455099 Plav_3644 Parvibaculum lavamentivorans DS-1 DNA-binding protein YP_001414899.1 3901031 R 402881 CDS YP_001414900.1 154254076 5455456 complement(3901344..3901721) 1 NC_009719.1 PFAM: protein of unknown function DUF1044; KEGG: shn:Shewana3_1245 protein of unknown function DUF1044; hypothetical protein 3901721 5455456 Plav_3645 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414900.1 3901344 R 402881 CDS YP_001414901.1 154254077 5455471 complement(3901769..3902572) 1 NC_009719.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: rpc:RPC_0364 UBA/ThiF-type NAD/FAD binding fold; UBA/THIF-type NAD/FAD-binding protein 3902572 5455471 Plav_3646 Parvibaculum lavamentivorans DS-1 UBA/THIF-type NAD/FAD-binding protein YP_001414901.1 3901769 R 402881 CDS YP_001414902.1 154254078 5455677 complement(3902619..3903416) 1 NC_009719.1 KEGG: rpe:RPE_0758 hypothetical protein; hypothetical protein 3903416 5455677 Plav_3647 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414902.1 3902619 R 402881 CDS YP_001414903.1 154254079 5455575 complement(3903431..3904132) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rxy:Rxyl_3013 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3904132 5455575 Plav_3648 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001414903.1 3903431 R 402881 CDS YP_001414904.1 154254080 5456319 complement(3904160..3904756) 1 NC_009719.1 PFAM: DSBA oxidoreductase; KEGG: pau:PA14_01440 putative 2-hydroxychromene-2-carboxylate isomerase; DSBA oxidoreductase 3904756 5456319 Plav_3649 Parvibaculum lavamentivorans DS-1 DSBA oxidoreductase YP_001414904.1 3904160 R 402881 CDS YP_001414905.1 154254081 5456462 complement(3904771..3905373) 1 NC_009719.1 PFAM: DSBA oxidoreductase; KEGG: bbt:BBta_5151 hypothetical protein; DSBA oxidoreductase 3905373 5456462 Plav_3650 Parvibaculum lavamentivorans DS-1 DSBA oxidoreductase YP_001414905.1 3904771 R 402881 CDS YP_001414906.1 154254082 5456520 complement(3905394..3906122) 1 NC_009719.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pau:PA14_01430 putative short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3906122 5456520 Plav_3651 Parvibaculum lavamentivorans DS-1 short-chain dehydrogenase/reductase SDR YP_001414906.1 3905394 R 402881 CDS YP_001414907.1 154254083 5456847 3906297..3906791 1 NC_009719.1 PFAM: helix-turn-helix HxlR type; KEGG: pau:PA14_01410 putative transcriptional regulator; HxlR family transcriptional regulator 3906791 5456847 Plav_3652 Parvibaculum lavamentivorans DS-1 HxlR family transcriptional regulator YP_001414907.1 3906297 D 402881 CDS YP_001414908.1 154254084 5456980 complement(3906793..3907752) 1 NC_009719.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: atc:AGR_C_543 cysteine synthase A; cysteine synthase A 3907752 5456980 Plav_3653 Parvibaculum lavamentivorans DS-1 cysteine synthase A YP_001414908.1 3906793 R 402881 CDS YP_001414909.1 154254085 5455945 complement(3907810..3908259) 1 NC_009719.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rru:Rru_A3795 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 3908259 5455945 Plav_3654 Parvibaculum lavamentivorans DS-1 BadM/Rrf2 family transcriptional regulator YP_001414909.1 3907810 R 402881 CDS YP_001414910.1 154254086 5455943 complement(3908264..3908731) 1 NC_009719.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: bja:bll0758 deoxyuridine 5'-triphosphate nucleotidohydrolase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 3908731 5455943 Plav_3655 Parvibaculum lavamentivorans DS-1 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_001414910.1 3908264 R 402881 CDS YP_001414911.1 154254087 5456979 complement(3908728..3909972) 1 NC_009719.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: sil:SPO0408 phosphopantothenoylcysteine synthase/decarboxylase; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 3909972 5456979 Plav_3656 Parvibaculum lavamentivorans DS-1 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_001414911.1 3908728 R 402881 CDS YP_001414912.1 154254088 5455455 complement(3910113..3911717) 1 NC_009719.1 TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: bbt:BBta_0082 ubiquinone biosynthesis protein UbiB; 2-polyprenylphenol 6-hydroxylase 3911717 5455455 Plav_3657 Parvibaculum lavamentivorans DS-1 2-polyprenylphenol 6-hydroxylase YP_001414912.1 3910113 R 402881 CDS YP_001414913.1 154254089 5456764 complement(3911719..3912507) 1 NC_009719.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpe:RPE_0470 ubiquinone/menaquinone biosynthesis methyltransferases; ubiquinone/menaquinone biosynthesis methyltransferase 3912507 5456764 Plav_3658 Parvibaculum lavamentivorans DS-1 ubiquinone/menaquinone biosynthesis methyltransferase YP_001414913.1 3911719 R 402881 CDS YP_001414914.1 154254090 5456284 3912563..3913444 1 NC_009719.1 TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycolase; KEGG: hne:HNE_3274 formamidopyrimidine-DNA glycosylase; formamidopyrimidine-DNA glycosylase 3913444 5456284 Plav_3659 Parvibaculum lavamentivorans DS-1 formamidopyrimidine-DNA glycosylase YP_001414914.1 3912563 D 402881 CDS YP_001414915.1 154254091 5456138 3913475..3913873 1 NC_009719.1 KEGG: mag:amb0633 hypothetical protein; hypothetical protein 3913873 5456138 Plav_3660 Parvibaculum lavamentivorans DS-1 hypothetical protein YP_001414915.1 3913475 D 402881 CDS YP_001414916.1 154254092 5456763 3913947..3914723 1 NC_009719.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rru:Rru_A3801 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 3914723 5456763 Plav_3661 Parvibaculum lavamentivorans DS-1 enoyl-CoA hydratase/isomerase YP_001414916.1 3913947 D 402881 CDS