-- dump date 20140619_231026 -- class Genbank::CDS -- table cds_note -- id note YP_004113887.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: eta:ETA_34530 chromosomal replication initiator protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase YP_004113888.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: cko:CKO_00047 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain YP_004113889.1 KEGG: eta:ETA_34510 recombination protein F; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein YP_004113890.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: eta:ETA_34500 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein YP_004113891.1 KEGG: pwa:Pecwa_4124 ribokinase; PFAM: PfkB domain protein; regulatory protein DeoR; SMART: regulatory protein DeoR YP_004113892.1 PFAM: dihydrodipicolinate synthetase; KEGG: ddc:Dd586_3832 dihydrodipicolinate synthetase YP_004113893.1 PFAM: conserved hypothetical protein; KEGG: ddc:Dd586_3833 hypothetical protein YP_004113894.1 PFAM: major facilitator superfamily MFS_1; KEGG: dda:Dd703_0299 major facilitator superfamily MFS_1 YP_004113895.1 KEGG: eta:ETA_34490 sugar phosphatase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004113896.1 KEGG: eta:ETA_34480 conserved hypothetical protein YidR YP_004113897.1 PFAM: protein of unknown function DUF1375; KEGG: spe:Spro_0047 hypothetical protein YP_004113898.1 PFAM: heat shock protein Hsp20; KEGG: eta:ETA_34460 heat shock protein IbpA YP_004113899.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pct:PC1_0057 hypothetical protein YP_004113900.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: dac:Daci_5754 YbaK/prolyl-tRNA synthetase associated region YP_004113901.1 KEGG: ami:Amir_2520 prolyl 4-hydroxylase alpha subunit YP_004113902.1 KEGG: mse:Msed_1080 glutamine amidotransferase-like protein YP_004113903.1 PFAM: protein of unknown function DUF201; KEGG: hoh:Hoch_6153 protein of unknown function DUF201 YP_004113904.1 KEGG: psb:Psyr_2911 hypothetical protein YP_004113905.1 KEGG: spe:Spro_0112 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004113906.1 PFAM: aminotransferase class I and II; KEGG: eta:ETA_34430 valine--pyruvate transaminase YP_004113907.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: eta:ETA_34410 2-ketogluconate reductase YP_004113908.1 PFAM: major facilitator superfamily MFS_1; KEGG: eta:ETA_34400 general substrate transporter:major facilitator superfamily YP_004113909.1 PFAM: PfkB domain protein; KEGG: eta:ETA_34390 sugar kinase, ribokinase family YP_004113910.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: spe:Spro_0060 xylose isomerase domain-containing protein YP_004113911.1 KEGG: kpu:KP1_5257 putative transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004113912.1 KEGG: ent:Ent638_4078 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004113913.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: eic:NT01EI_0021 inner membrane lipoprotein YiaD YP_004113914.1 TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: efe:EFER_3546 3-methyl-adenine DNA glycosylase I; PFAM: methyladenine glycosylase YP_004113915.1 KEGG: spe:Spro_0065 outer membrane autotransporter YP_004113916.1 KEGG: spe:Spro_2143 hypothetical protein YP_004113917.1 KEGG: kpn:KPN_04812 primosomal protein DnaI YP_004113918.1 KEGG: bas:BUsg022 DNA replication protein DnaC; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_004113919.1 PFAM: ROK family protein; KEGG: acr:Acry_0116 ROK family protein YP_004113920.1 KEGG: stm:STM4418 sugar transporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter YP_004113921.1 KEGG: kpe:KPK_4702 sugar binding transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004113922.1 PFAM: acyltransferase 3; KEGG: pdi:BDI_3012 acyltransferase YP_004113923.1 KEGG: eta:ETA_13260 exopolysaccharide biosynthesis protein YP_004113924.1 KEGG: dze:Dd1591_1964 pectin acetylesterase YP_004113925.1 KEGG: spe:Spro_1523 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004113926.1 SMART: Helix-turn-helix, AraC domain; KEGG: pau:PA14_32460 putative transcriptional regulator YP_004113927.1 KEGG: dps:DP0387 hypothetical protein YP_004113928.1 PFAM: SMC domain protein; KEGG: vcj:VCD_001965 ATP binding protein YP_004113929.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: mmw:Mmwyl1_2428 RNA-directed DNA polymerase (reverse transcriptase) YP_004113930.1 KEGG: rlt:Rleg2_6152 hypothetical protein YP_004113931.1 KEGG: nha:Nham_1350 hypothetical protein; PFAM: protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004113932.1 KEGG: spe:Spro_0102 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004113933.1 PFAM: inner-membrane translocator; KEGG: kpu:KP1_5280 D-xylose transport system permease component YP_004113934.1 TIGRFAM: D-xylose ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: kpe:KPK_0174 xylose transporter ATP-binding subunit; SMART: AAA ATPase YP_004113935.1 KEGG: esa:ESA_04161 D-xylose transporter subunit XylF; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator YP_004113936.1 TIGRFAM: xylose isomerase; KEGG: sbc:SbBS512_E3959 xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel YP_004113937.1 KEGG: ent:Ent638_0157 xylulokinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like YP_004113938.1 KEGG: eta:ETA_34080 putative transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: Helix-turn-helix, AraC domain YP_004113939.1 PFAM: acyltransferase 3; KEGG: eta:ETA_34110 putative inner membrane protein YiaH YP_004113940.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rca:Rcas_3855 mandelate racemase/muconate lactonizing protein YP_004113941.1 KEGG: rsh:Rsph17029_4146 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004113942.1 KEGG: sti:Sthe_1390 dihydroorotase, multifunctional complex type; PFAM: amidohydrolase YP_004113943.1 KEGG: drm:Dred_1836 ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic component YP_004113944.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: azc:AZC_1619 FMN-dependent alpha-hydroxy acid dehydrogenase YP_004113945.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC transporter related; binding-protein-dependent transport systems inner membrane component; KEGG: bph:Bphy_5151 polar amino acid ABC transporter, inner membrane subunit; SMART: AAA ATPase YP_004113946.1 KEGG: bph:Bphy_5150 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004113947.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bxe:Bxe_B2346 putative dehydrogenase YP_004113948.1 KEGG: hau:Haur_0144 putative endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP YP_004113949.1 TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: ctu:Ctu_40670 glycyl-tRNA synthetase alpha subunit; PFAM: glycyl-tRNA synthetase alpha subunit YP_004113950.1 TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: eta:ETA_34130 glycyl-tRNA synthetase subunit beta YP_004113951.1 PFAM: plasmid stabilization system; KEGG: seh:SeHA_C3160 plasmid stabilization system protein, RelE/ParE family YP_004113952.1 KEGG: sew:SeSA_A3114 putative addiction module antidote protein, family; TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156 YP_004113953.1 KEGG: ecq:ECED1_4276 selenocysteinyl-tRNA-specific translation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3 YP_004113954.1 TIGRFAM: L-seryl-tRNA selenium transferase; KEGG: kpu:KP1_5287 selenocysteine synthase; PFAM: Pyridoxal phosphate-dependent transferase YP_004113955.1 PFAM: Glutathione S-transferase domain; KEGG: sea:SeAg_B3898 putative glutathione S-transferase YP_004113956.1 KEGG: esa:ESA_03865 formate dehydrogenase accessory protein FdhE; TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein YP_004113957.1 KEGG: spe:Spro_0086 formate dehydrogenase-O subunit gamma; TIGRFAM: formate dehydrogenase, gamma subunit; PFAM: cytochrome B561 YP_004113958.1 KEGG: ent:Ent638_4086 formate dehydrogenase beta subunit; TIGRFAM: formate dehydrogenase, beta subunit; PFAM: Formate dehydrogenase transmembrane domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004113959.1 TIGRFAM: formate dehydrogenase, alpha subunit; KEGG: ent:Ent638_4085 formate dehydrogenase alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_004113960.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: ctu:Ctu_01430 hypothetical protein YP_004113961.1 KEGG: ypi:YpsIP31758_4120 formate dehydrogenase accessory protein; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD YP_004113962.1 KEGG: eta:ETA_34310 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004113963.1 PFAM: aminotransferase class-III; KEGG: eta:ETA_34300 putative aminotransferase YP_004113964.1 KEGG: PAN3; Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex, which acts to control poly(A) tail length and regulate the stoichiometry and activity of postreplication repair complexes; K12572 PAB-dependent poly(A)-TRUNCATED- YP_004113965.1 PFAM: Manganese/iron superoxide dismutase-like; KEGG: eta:ETA_34290 manganese superoxide dismutase YP_004113966.1 KEGG: ddc:Dd586_1267 protein of unknown function DUF535; manually curated; PFAM: protein of unknown function DUF535 YP_004113967.1 KEGG: eta:ETA_34210 hypothetical protein YP_004113968.1 KEGG: ent:Ent638_0134 mannitol repressor protein; manually curated; PFAM: Mannitol repressor YP_004113969.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: sfv:SFV_3937 mannitol-1-phosphate 5-dehydrogenase YP_004113970.1 KEGG: ses:SARI_03955 hypothetical protein; TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit YP_004113971.1 KEGG: eta:ETA_34160 conserved hypothetical protein YiaF YP_004113972.1 KEGG: dda:Dd703_2623 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_004113973.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_2624 binding-protein-dependent transport systems inner membrane component YP_004113974.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_2625 binding-protein-dependent transport systems inner membrane component YP_004113975.1 PFAM: extracellular solute-binding protein family 5; KEGG: ent:Ent638_0753 extracellular solute-binding protein YP_004113976.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ent:Ent638_0752 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004113977.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ent:Ent638_0751 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004113978.1 KEGG: dda:Dd703_2629 GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004113979.1 TIGRFAM: ABC transporter periplasmic binding protein, urea carboxylase region; KEGG: ddc:Dd586_0059 ABC transporter periplasmic binding protein, UreA carboxylase region YP_004113980.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddc:Dd586_0058 binding-protein-dependent transport systems inner membrane component YP_004113981.1 KEGG: ddc:Dd586_0057 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004113982.1 KEGG: ddc:Dd586_0056 UreA carboxylase-associated protein 2; TIGRFAM: urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989 YP_004113983.1 KEGG: dze:Dd1591_0046 UreA carboxylase-associated protein 1; TIGRFAM: urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989 YP_004113984.1 TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; Allophanate hydrolase subunit 1; biotin/lipoyl attachment domain-containing protein; KEGG: dze:Dd1591_0045 UreA carboxylase; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1 YP_004113985.1 KEGG: eta:ETA_34150 putative transcriptional regulator YP_004113986.1 KEGG: eta:ETA_34030 guanosine polyphosphate pyrophosphohydrolase/synthetases; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004113987.1 KEGG: ent:Ent638_0519 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004113988.1 KEGG: eta:ETA_34010 organic hydroperoxide resistance protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein YP_004113989.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: eta:ETA_34000 phosphoethanolamine transferase YP_004113990.1 PFAM: extracellular solute-binding protein family 5; KEGG: eta:ETA_33990 periplasmic dipeptide transport protein YP_004113991.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_33980 dipeptide transporter permease DppB YP_004113992.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_33970 dipeptide transporter YP_004113993.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: eta:ETA_33960 dipeptide transporter ATP-binding subunit; SMART: AAA ATPase YP_004113994.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: eta:ETA_33950 dipeptide transporter ATP-binding subunit; SMART: AAA ATPase YP_004113995.1 KEGG: eta:ETA_33940 hypothetical protein YP_004113996.1 TIGRFAM: cellulose synthase operon protein YhjQ; KEGG: ent:Ent638_3941 hypothetical protein YP_004113997.1 KEGG: eta:ETA_33920 cellulose synthase, cellulose synthase operon protein A; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ YP_004113998.1 PFAM: Cellulose synthase BcsB; KEGG: eta:ETA_33910 cellulose synthase regulator protein YP_004113999.1 PFAM: cellulose synthase operon C domain protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; KEGG: ddc:Dd586_4059 cellulose synthase operon C domain protein YP_004114000.1 KEGG: eta:ETA_33890 cellulose synthase operon protein D YP_004114001.1 PFAM: glycoside hydrolase family 8; KEGG: eta:ETA_33880 minor endoglucanase Y precursor (endo-1,4-beta-glucanase Y) YP_004114002.1 KEGG: GJ23421 gene product from transcript GJ23421-RA YP_004114003.1 PFAM: cellulose synthase operon C domain protein; Tetratricopeptide TPR_4; TPR repeat-containing protein; KEGG: spe:Spro_0151 cellulose synthase subunit BcsC YP_004114004.1 PFAM: Cellulose synthase BcsB; KEGG: spe:Spro_0149 cellulose synthase regulator protein YP_004114005.1 KEGG: spe:Spro_0148 cellulose synthase catalytic subunit; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ YP_004114006.1 KEGG: pct:PC1_0077 cellulose synthase operon protein YhjQ; TIGRFAM: cellulose synthase operon protein YhjQ; PFAM: YhjQ family protein YP_004114007.1 KEGG: yen:YE4076 hypothetical protein YP_004114008.1 TIGRFAM: cellulose biosynthesis protein BcsE; KEGG: yen:YE4077 hypothetical protein YP_004114009.1 KEGG: eca:ECA4365 hypothetical protein YP_004114010.1 TIGRFAM: cellulose synthase operon protein YhjU; KEGG: spe:Spro_0143 hypothetical protein YP_004114011.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: eta:ETA_33870 putative phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_004114012.1 PFAM: sodium:dicarboxylate symporter; KEGG: eta:ETA_33860 C4-dicarboxylate transporter DctA YP_004114013.1 PFAM: peptidase M16 domain protein; KEGG: eta:ETA_33850 putative peptidase M16 YP_004114014.1 KEGG: eca:ECA2408 pectin acetylesterase YP_004114015.1 PFAM: PfkB domain protein; KEGG: esa:ESA_04211 hypothetical protein YP_004114016.1 KEGG: eta:ETA_33830 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_004114017.1 PFAM: AsmA family protein; KEGG: eta:ETA_33820 conserved hypothetical protein YhjG YP_004114018.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: dze:Dd1591_0150 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004114019.1 KEGG: eta:ETA_01920 ATP-dependent DNA helicase Rep; TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase YP_004114020.1 KEGG: similar to zormin CG33484-PA YP_004114021.1 KEGG: eta:ETA_01930 guanosine pentaphosphate phosphohydrolase; PFAM: Ppx/GppA phosphatase YP_004114022.1 KEGG: eta:ETA_01940 ATP-dependent RNA helicase RhlB; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004114023.1 KEGG: kpu:KP1_0144 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain YP_004114024.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: ddc:Dd586_3900 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase YP_004114025.1 KEGG: eta:ETA_01970 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: Glycosyl transferase, family 4, conserved region YP_004114026.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: spe:Spro_0162 lipopolysaccharide biosynthesis protein WzzE YP_004114027.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; manually curated; KEGG: eta:ETA_01990 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_004114028.1 KEGG: esa:ESA_03771 UDP-N-acetyl-D-mannosamine dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_004114029.1 KEGG: eta:ETA_02030 TDP-fucosamine acetyltransferase; TIGRFAM: TDP-D-fucosamine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004114030.1 KEGG: eta:ETA_02040 TDP-4-oxo-6-deoxy-D-glucose transaminase; TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_004114031.1 PFAM: polysaccharide biosynthesis protein; KEGG: eta:ETA_02050 lipopolysaccharide biosynthesis protein YP_004114032.1 PFAM: 4-alpha-L-fucosyltransferase; KEGG: spe:Spro_0170 4-alpha-L-fucosyltransferase YP_004114033.1 PFAM: WzyE family protein; KEGG: eca:ECA4201 putative common antigen polymerase YP_004114034.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; KEGG: esa:ESA_03765 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; PFAM: glycosyl transferase WecB/TagA/CpsF YP_004114035.1 TIGRFAM: HemY protein; PFAM: HemY domain protein; Tetratricopeptide TPR_2 repeat protein; KEGG: eta:ETA_02090 putative protoheme IX biogenesis protein; SMART: Tetratricopeptide repeat YP_004114036.1 KEGG: eta:ETA_02100 putative uroporphyrinogen III C-methyltransferase; PFAM: protein of unknown function DUF513 hemX; Fimbrial assembly family protein YP_004114037.1 KEGG: eta:ETA_02110 uroporphyrinogen III synthase; PFAM: Uroporphyrinogen III synthase HEM4 YP_004114038.1 KEGG: eta:ETA_02120 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase YP_004114039.1 KEGG: eta:ETA_02130 adenylate cyclase; PFAM: adenylate cyclase class-I YP_004114040.1 KEGG: dda:Dd703_0231 hypothetical protein YP_004114041.1 KEGG: eta:ETA_02150 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_004114042.1 PFAM: protein of unknown function DUF484; KEGG: eta:ETA_02160 hypothetical protein YP_004114043.1 KEGG: eta:ETA_02170 site-specific tyrosine recombinase XerC; TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_004114044.1 KEGG: eta:ETA_02180 putative hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004114045.1 KEGG: eta:ETA_02190 DNA-dependent helicase II; TIGRFAM: DNA helicase II; PFAM: UvrD/REP helicase YP_004114046.1 KEGG: spe:Spro_0188 magnesium/nickel/cobalt transporter CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein YP_004114047.1 KEGG: spe:Spro_0189 putative ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase YP_004114048.1 KEGG: esa:ESA_03741 hypothetical protein; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane YP_004114049.1 PFAM: thioesterase superfamily protein; KEGG: ctu:Ctu_02510 uncharacterized protein YigI YP_004114050.1 KEGG: eta:ETA_02220 phospholipase A; PFAM: phospholipase A1 YP_004114051.1 TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; KEGG: eta:ETA_02230 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein YP_004114052.1 KEGG: spe:Spro_0194 threonine efflux system; TIGRFAM: homoserine/threonine efflux pump; PFAM: Lysine exporter protein (LYSE/YGGA) YP_004114053.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: eta:ETA_02240 homoserine/homoserine lactone efflux protein YP_004114054.1 KEGG: eta:ETA_02250 lysophospholipase L2; PFAM: alpha/beta hydrolase fold YP_004114055.1 KEGG: yen:YE0208 putative sugar phosphatase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004114056.1 KEGG: ypp:YPDSF_3407 membrane protein; TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane YP_004114057.1 PFAM: protein of unknown function DUF1456; KEGG: eta:ETA_02290 hypothetical protein YP_004114058.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_02300 LysR-family transcriptional regulatory protein YP_004114059.1 TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; KEGG: eta:ETA_02310 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein YP_004114060.1 KEGG: eta:ETA_02320 putative carboxymethylenebutenolidase; PFAM: dienelactone hydrolase YP_004114061.1 KEGG: eta:ETA_02330 uridine phosphorylase; TIGRFAM: uridine phosphorylase; PFAM: purine or other phosphorylase family 1 YP_004114062.1 KEGG: aci:ACIAD0355 hypothetical protein YP_004114063.1 PFAM: protein of unknown function DUF195; KEGG: eta:ETA_02340 DNA recombination protein YP_004114064.1 KEGG: eta:ETA_02350 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase YP_004114065.1 PFAM: Sterol-binding domain protein; KEGG: eta:ETA_02360 conserved hypothetical protein YigP YP_004114066.1 KEGG: eta:ETA_02370 putative ubiquinone biosynthesis protein UbiB; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein YP_004114067.1 KEGG: ent:Ent638_3957 twin arginine translocase protein A; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_004114068.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: eta:ETA_02390 probable sec-independent protein translocase protein TatB YP_004114069.1 KEGG: eta:ETA_02400 twin-arginine protein translocation system subunit TatC; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase YP_004114070.1 PFAM: TatD-related deoxyribonuclease; KEGG: eta:ETA_02410 DNase TatD YP_004114071.1 TIGRFAM: transcriptional activator RfaH; PFAM: NGN domain protein; KEGG: dda:Dd703_3755 transcriptional acivator RfaH; SMART: NGN domain protein YP_004114072.1 KEGG: spe:Spro_0257 peptidase E; PFAM: peptidase S51 dipeptidase E YP_004114073.1 KEGG: esa:ESA_03718 3-octaprenyl-4-hydroxybenzoate decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein YP_004114074.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: eta:ETA_02440 FMN reductase YP_004114075.1 KEGG: esa:ESA_03715 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA C-acyltransferase FadA; acetyl-CoA acetyltransferase YP_004114076.1 KEGG: eta:ETA_02460 multifunctional fatty acid oxidation complex subunit alpha; TIGRFAM: fatty oxidation complex, alpha subunit FadB; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein YP_004114077.1 KEGG: eta:ETA_02470 proline dipeptidase; PFAM: peptidase M24 YP_004114078.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: eta:ETA_02480 hypothetical protein YP_004114079.1 KEGG: eta:ETA_02490 potassium transporter; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter YP_004114080.1 KEGG: eta:ETA_02500 protoporphyrinogen oxidase YP_004114081.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: ect:ECIAI39_4361 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein YP_004114082.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; biotin operon repressor; KEGG: eta:ETA_01460 biotin--protein ligase; PFAM: biotin/lipoate A/B protein ligase; Helix-turn-helix type 11 domain protein; biotin protein ligase domain protein YP_004114083.1 KEGG: esa:ESA_03704 pantothenate kinase; TIGRFAM: pantothenate kinase; PFAM: phosphoribulokinase/uridine kinase YP_004114084.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ypp:YPDSF_3378 acetyltransferase YP_004114085.1 KEGG: eta:ETA_31660 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein YP_004114086.1 KEGG: spe:Spro_0271 preprotein translocase subunit SecE; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein YP_004114087.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; KEGG: eta:ETA_01500 transcription antitermination protein NusG; SMART: NGN domain protein; KOW domain protein YP_004114088.1 TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: eta:ETA_01510 50S ribosomal protein L11; SMART: ribosomal protein L11 YP_004114089.1 KEGG: ddc:Dd586_0212 ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1 YP_004114090.1 PFAM: ribosomal protein L10; KEGG: eca:ECA0221 50S ribosomal protein L10 YP_004114091.1 KEGG: stm:STM4152 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 YP_004114092.1 KEGG: eta:ETA_01550 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7 YP_004114093.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: eta:ETA_01560 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein YP_004114094.1 PFAM: protein of unknown function DUF1127; KEGG: ent:Ent638_0495 hypothetical protein YP_004114095.1 KEGG: eta:ETA_01690 putative GntR-family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004114096.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; KEGG: eta:ETA_01700 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_004114097.1 KEGG: dze:Dd1591_3870 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC YP_004114098.1 PFAM: regulator of RNA polymerase sigma(70) subunit Rsd/AlgQ; KEGG: ctu:Ctu_03060 regulator of sigma D YP_004114099.1 KEGG: eta:ETA_01730 NADH pyrophosphatase; PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase YP_004114100.1 TIGRFAM: uroporphyrinogen decarboxylase; KEGG: eta:ETA_01740 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_004114101.1 KEGG: dze:Dd1591_3866 deoxyribonuclease V; PFAM: Endonuclease V YP_004114102.1 PFAM: protein of unknown function DUF416; KEGG: efe:EFER_3755 hypothetical protein YP_004114103.1 KEGG: eta:ETA_01770 transcriptional regulator HU subunit alpha; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004114104.1 PFAM: protein of unknown function DUF1481; KEGG: eta:ETA_01780 conserved hypothetical protein YjaH YP_004114105.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: eta:ETA_01790 phosphoribosylamine-glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain YP_004114106.1 SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: cko:CKO_02983 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein YP_004114107.1 manually curated; KEGG: cko:CKO_02982 hypothetical protein YP_004114108.1 PFAM: Carbohydrate-selective porin OprB; KEGG: pag:PLES_30131 putative glucose-sensitive porin YP_004114109.1 TIGRFAM: homoserine O-succinyltransferase; KEGG: eta:ETA_31200 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase YP_004114110.1 TIGRFAM: malate synthase A; KEGG: kpe:KPK_5279 malate synthase; PFAM: Malate synthase family protein YP_004114111.1 KEGG: dda:Dd703_0451 isocitrate lyase; TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase YP_004114112.1 KEGG: esa:ESA_00055 bifunctional isocitrate dehydrogenase kinase/phosphatase protein; PFAM: Isocitrate dehydrogenase kinasephosphatase YP_004114113.1 KEGG: kpu:KP1_0256 repressor of aceBA operon; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004114114.1 KEGG: kpu:KP1_0257 B12-dependent methionine synthase; TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region YP_004114115.1 PFAM: protein of unknown function DUF940 membrane lipoprotein putative; KEGG: eta:ETA_31070 conserved hypothetical protein YjbH YP_004114116.1 PFAM: protein of unknown function DUF1017; KEGG: eta:ETA_31080 conserved hypothetical protein YmcB YP_004114117.1 manually curated; KEGG: eta:ETA_31090 putative lipoprotein YmcC YP_004114118.1 KEGG: sea:SeAg_B4479 hypothetical protein YP_004114119.1 manually curated; KEGG: sea:SeAg_B4478 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI) YP_004114120.1 TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; KEGG: ctu:Ctu_37900 lysine-sensitive aspartokinase 3; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_004114121.1 KEGG: cko:CKO_02204 aquaporin Z; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein YP_004114122.1 PFAM: Bile acid:sodium symporter; KEGG: eta:ETA_31130 putative Na+-dependent transporter YP_004114123.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: dze:Dd1591_0218 multiple antibiotic resistance (MarC)-related protein YP_004114124.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: eta:ETA_32500 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_004114125.1 TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; KEGG: kpe:KPK_0316 glycogen branching enzyme; SMART: alpha amylase catalytic sub domain YP_004114126.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: eoi:ECO111_4242 glycogen debranching enzyme GlgX; SMART: alpha amylase catalytic sub domain YP_004114127.1 KEGG: eta:ETA_32470 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase YP_004114128.1 KEGG: eta:ETA_32460 glycogen synthase; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1 YP_004114129.1 KEGG: eta:ETA_32450 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_004114130.1 KEGG: eta:ETA_32850 hypothetical protein YP_004114131.1 KEGG: eta:ETA_32840 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165 YP_004114132.1 PFAM: SirA family protein; KEGG: sdy:SDY_3621 sulfur transfer protein SirA YP_004114133.1 KEGG: eta:ETA_32820 zinc/cadmium/mercury/lead-transporting ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_004114134.1 PFAM: YhhN family protein; KEGG: eta:ETA_32810 hypothetical protein YhhN YP_004114135.1 PFAM: Protein of unknown function DUF2500; KEGG: eta:ETA_32800 hypothetical protein YP_004114136.1 PFAM: protein of unknown function DUF1145; KEGG: eta:ETA_32790 hypothetical protein YP_004114137.1 TIGRFAM: methyltransferase; KEGG: kpn:KPN_03831 16S rRNA m(2)G966-methyltransferase; PFAM: Protein of unknown function methylase putative YP_004114138.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: kpe:KPK_0283 cell division protein FtsY; SMART: AAA ATPase YP_004114139.1 TIGRFAM: Type II (General) Secretory Pathway (IISP) Family protein; cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: eta:ETA_32760 cell division protein FtsE; SMART: AAA ATPase YP_004114140.1 KEGG: eta:ETA_32750 cell division protein FtsX; TIGRFAM: protein insertion ABC transporter, inner membrane subunit FtsX; PFAM: protein of unknown function DUF214 YP_004114141.1 KEGG: ctu:Ctu_39700 RNA polymerase sigma-32 factor; TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein YP_004114142.1 KEGG: sek:SSPA3188a hypothetical protein YP_004114143.1 PFAM: Extracellular ligand-binding receptor; KEGG: eta:ETA_32720 branched-chain amino acid-binding protein YP_004114144.1 PFAM: inner-membrane translocator; KEGG: eta:ETA_32710 branched-chain amino acid transporter permease subunit LivH YP_004114145.1 PFAM: inner-membrane translocator; KEGG: eta:ETA_32700 leucine/isoleucine/valine transporter permease subunit YP_004114146.1 KEGG: eta:ETA_32690 leucine/isoleucine/valine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004114147.1 KEGG: esa:ESA_04287 leucine/isoleucine/valine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004114148.1 PFAM: extracellular solute-binding protein family 1; KEGG: eta:ETA_32650 glycerol-3-phosphate transporter periplasmic binding protein YP_004114149.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_32640 glycerol-3-phosphate transporter permease YP_004114150.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_32630 glycerol-3-phosphate transporter membrane protein YP_004114151.1 KEGG: eta:ETA_32620 glycerol-3-phosphate transporter ATP-binding subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_004114152.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: eta:ETA_32610 cytoplasmic glycerophosphodiester phosphodiesterase YP_004114153.1 KEGG: eta:ETA_32600 hypothetical protein YP_004114154.1 KEGG: eta:ETA_32590 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_004114155.1 KEGG: hypothetical protein YP_004114156.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_4654 GCN5-related N-acetyltransferase YP_004114157.1 KEGG: eta:ETA_32530 gluconate utilization system Gnt-I transcriptional repressor; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004114158.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: eta:ETA_32520 gluconate kinase 1; PFAM: shikimate kinase YP_004114159.1 KEGG: eta:ETA_32510 low-affinity gluconate transporter; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter YP_004114160.1 KEGG: eta:ETA_31140 putative sodium/phosphate cotransporter; TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein YP_004114161.1 KEGG: spe:Spro_4484 ABC transporter-related protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_004114162.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddc:Dd586_3418 binding-protein-dependent transport systems inner membrane component YP_004114163.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddc:Dd586_3419 binding-protein-dependent transport systems inner membrane component YP_004114164.1 KEGG: dze:Dd1591_0726 hypothetical protein YP_004114165.1 KEGG: ddc:Dd586_3421 extracellular solute-binding protein family 1 YP_004114166.1 KEGG: ddc:Dd586_3422 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004114167.1 PFAM: phosphate-starvation-inducible E; KEGG: eta:ETA_31060 phosphate-starvation-inducible protein PsiE YP_004114168.1 KEGG: spe:Spro_2232 prolyl oligopeptidase; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein YP_004114169.1 KEGG: eta:ETA_31050 chorismate pyruvate lyase; PFAM: Chorismate lyase YP_004114170.1 KEGG: eta:ETA_31040 4-hydroxybenzoate octaprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase YP_004114171.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: eta:ETA_31030 glycerol-3-phosphate acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004114172.1 KEGG: set:SEN4005 diacylglycerol kinase; PFAM: diacylglycerol kinase YP_004114173.1 KEGG: cko:CKO_03872 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region YP_004114174.1 KEGG: eoj:ECO26_5160 DNA-damage-inducible SOS response protein DinF; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004114175.1 PFAM: CsbD family protein; KEGG: cko:CKO_03869 putative stress-response protein YP_004114176.1 PFAM: ferric-uptake regulator; KEGG: dze:Dd1591_3523 ferric uptake regulator, Fur family YP_004114177.1 KEGG: eta:ETA_30980 putative plasmid transfer protein TraF YP_004114178.1 KEGG: ctu:Ctu_37660 tRNA-dihydrouridine synthase A; TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS YP_004114179.1 KEGG: kpe:KPK_5238 phage shock protein G; TIGRFAM: phage shock protein G; PFAM: shock protein G YP_004114180.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pct:PC1_3497 alcohol dehydrogenase zinc-binding domain protein YP_004114181.1 SMART: AAA ATPase; manually curated; TIGRFAM: replicative DNA helicase; KEGG: dda:Dd703_0741 replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein YP_004114182.1 KEGG: eta:ETA_30930 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type YP_004114183.1 PFAM: protein of unknown function DUF161; KEGG: pct:PC1_3503 hypothetical protein YP_004114184.1 KEGG: esa:ESA_00101 aromatic amino acid aminotransferase; PFAM: aminotransferase class I and II YP_004114185.1 PFAM: protein of unknown function UPF0047; KEGG: eta:ETA_30900 conserved hypothetical protein YjbQ YP_004114186.1 PFAM: protein of unknown function DUF419; KEGG: stm:STM4251 putative cytoplasmic protein YP_004114187.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eta:ETA_30870 zinc-containing alcohol dehydrogenase superfamily YP_004114188.1 KEGG: kpe:KPK_5230 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related YP_004114189.1 KEGG: eta:ETA_30850 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_004114190.1 PFAM: amino acid permease-associated region; KEGG: dze:Dd1591_0705 amino acid permease-associated region YP_004114191.1 KEGG: mpo:Mpop_4205 glyoxalase/bleomycin resistance protein/dioxygenase YP_004114192.1 PFAM: isochorismatase hydrolase; KEGG: kpu:KP1_1177 hypothetical isochorismatase family protein YP_004114193.1 KEGG: pct:PC1_1393 transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004114194.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: spe:Spro_2538 hypothetical protein YP_004114195.1 PFAM: transposase IS3/IS911 family protein; KEGG: ses:SARI_02635 hypothetical protein YP_004114196.1 PFAM: polysaccharide biosynthesis protein; KEGG: spe:Spro_1343 polysaccharide biosynthesis protein YP_004114197.1 KEGG: xac:XAC0085 hypothetical protein YP_004114198.1 KEGG: spe:Spro_2355 hypothetical protein YP_004114199.1 KEGG: eta:ETA_30790 DNA-binding transcriptional regulator SoxS; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004114200.1 TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: eta:ETA_30780 redox-sensitive transcriptional activator SoxR; SMART: regulatory protein MerR YP_004114201.1 PFAM: Glutathione S-transferase domain; KEGG: eta:ETA_30770 putative glutathione S-transferase YP_004114202.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: eta:ETA_30760 inner membrane protein YjcD YP_004114203.1 KEGG: eta:ETA_30750 putative Na(+)/H(+) exchanger YjcE; TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger YP_004114204.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_30740 putative transcriptional regulator, LysR family YP_004114205.1 PFAM: LrgA family protein; KEGG: eta:ETA_30730 hypothetical protein YP_004114206.1 PFAM: LrgB family protein; KEGG: eta:ETA_30720 putative inner membrane protein YP_004114207.1 PFAM: YfaZ family protein; KEGG: eta:ETA_30710 hypothetical protein YP_004114208.1 KEGG: esa:ESA_00120 hypothetical protein; TIGRFAM: cation/acetate symporter ActP; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_004114209.1 PFAM: protein of unknown function DUF485; KEGG: pct:PC1_0684 hypothetical protein YP_004114210.1 KEGG: kpe:KPK_5191 acetyl-CoA synthetase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_004114211.1 PFAM: sodium:dicarboxylate symporter; KEGG: eta:ETA_30670 proton glutamate symport protein YP_004114212.1 KEGG: pmr:PMI3138 phosphosugar binding/isomerase; TIGRFAM: glucokinase regulatory-like protein; PFAM: sugar isomerase (SIS) YP_004114213.1 KEGG: abb:ABBFA_002536 hypothetical protein YP_004114214.1 KEGG: gym:GYMC10_2894 Ig domain protein group 2 domain protein YP_004114215.1 KEGG: ddc:Dd586_0524 putative capsular polysacharide biosynthesis transferase YP_004114216.1 PFAM: glycosyl transferase family 2; KEGG: eck:EC55989_2289 glycosyl transferase, putative YP_004114217.1 PFAM: glycosyl transferase group 1; KEGG: kpn:KPN_02507 glycosyltransferase YP_004114218.1 KEGG: spe:Spro_2884 hypothetical protein YP_004114219.1 PFAM: glycosyl transferase family 2; KEGG: kpn:KPN_02504 putative glucuronosyltransferase YP_004114220.1 TIGRFAM: capsular exopolysaccharide family; KEGG: spe:Spro_1585 non-specific protein-tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein YP_004114221.1 KEGG: ecx:EcHS_A2185 hypothetical protein YP_004114222.1 TIGRFAM: capsular exopolysaccharide family; KEGG: spe:Spro_1585 non-specific protein-tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein YP_004114223.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: eta:ETA_30660 methyl-accepting chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; PAS domain containing protein; PAC repeat-containing protein YP_004114224.1 KEGG: bmj:BMULJ_03402 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004114225.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpn:KPN_01660 MFS family transporter YP_004114226.1 KEGG: kpe:KPK_1527 hypothetical protein YP_004114227.1 KEGG: spe:Spro_0586 putative receptor YP_004114228.1 PFAM: SbmABacA family protein; KEGG: dze:Dd1591_1880 SbmABacA family protein YP_004114229.1 KEGG: eta:ETA_30610 gluconate 2-dehydrogenase subunit 3 YP_004114230.1 KEGG: eta:ETA_30600 gluconate 2-dehydrogenase flavoprotein (GADH dehydrogenase subunit); PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; glucose-methanol-choline oxidoreductase YP_004114231.1 KEGG: eta:ETA_30590 gluconate 2-dehydrogenase cytochrome c subunit; PFAM: cytochrome c class I YP_004114232.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3193 major facilitator transporter YP_004114233.1 PFAM: AbgT putative transporter; KEGG: spe:Spro_4202 putative aminobenzoyl-glutamate transporter YP_004114234.1 KEGG: spe:Spro_4201 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_004114235.1 KEGG: dda:Dd703_0516 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004114236.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_4199 putative DNA-binding transcriptional regulator YP_004114237.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: kpu:KP1_0367 hypothetical protein YP_004114238.1 PFAM: Nucleoside-specific channel-forming protein, Tsx-like; KEGG: eta:ETA_09440 nucleoside channel; receptor of phage T6 and colicin K YP_004114239.1 KEGG: vap:Vapar_4982 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004114240.1 KEGG: vap:Vapar_4983 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_004114241.1 KEGG: spe:Spro_3482 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004114242.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_30530 transcriptional regulator, LysR family YP_004114243.1 PFAM: major facilitator superfamily MFS_1; KEGG: oan:Oant_3953 major facilitator transporter YP_004114244.1 SMART: Pyrrolo-quinoline quinone beta-propeller repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; KEGG: spe:Spro_3100 quinoprotein glucose dehydrogenase; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone YP_004114245.1 KEGG: tac:Ta0915 chorismate mutase/prephenate dehydratase related protein YP_004114246.1 PFAM: major facilitator superfamily MFS_1; KEGG: ctu:Ctu_30380 hypothetical protein YP_004114247.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: atc:AGR_C_4719 hypothetical protein YP_004114248.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: vvy:VV2740 N-acetylglucosamine kinase YP_004114249.1 PFAM: ROK family protein; KEGG: cai:Caci_6967 ROK family protein YP_004114250.1 KEGG: rle:pRL90283 putative ATP-binding protein of ABC transporter; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_004114251.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rle:RL1656 putative acetyltransferase YP_004114252.1 PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0001624 putative sugar ABC transporter, substrate-binding protein YP_004114253.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH01556 sugar ABC transporter, permease protein YP_004114254.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL1659 putative transmembrane component of ABC transporter YP_004114255.1 PFAM: glycoside hydrolase family 28; KEGG: pct:PC1_3371 glycoside hydrolase family 28 YP_004114256.1 TIGRFAM: tartrate dehydrogenase; KEGG: reh:H16_A0477 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004114257.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ddc:Dd586_0851 transcriptional regulator, LysR family YP_004114258.1 KEGG: zmn:Za10_0932 sugar transporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter YP_004114259.1 PFAM: Na+/solute symporter; KEGG: ddc:Dd586_3497 Na+/solute symporter YP_004114260.1 KEGG: dze:Dd1591_0644 hypothetical protein YP_004114261.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pct:PC1_3542 short-chain dehydrogenase/reductase SDR YP_004114262.1 KEGG: spe:Spro_2392 PAS modulated sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004114263.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: spe:Spro_2393 inositol 2-dehydrogenase YP_004114264.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: spe:Spro_2394 xylose isomerase domain-containing protein YP_004114265.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_2395 periplasmic binding protein/LacI transcriptional regulator YP_004114266.1 KEGG: cko:CKO_02606 hypothetical protein YP_004114267.1 PFAM: protein of unknown function DUF1330; KEGG: hne:HNE_0653 hypothetical protein YP_004114268.1 PFAM: Glutathione S-transferase domain; KEGG: eck:EC55989_3405 putative glutathione S-transferase YghU YP_004114269.1 KEGG: kpu:KP1_1421 hypothetical protein; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_004114270.1 KEGG: kpn:KPN_00507 putative oxidoreductase; PFAM: oxidoreductase domain protein; Oxidoreductase domain YP_004114271.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: eta:ETA_32870 myo-inositol catabolism protein YP_004114272.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: kpe:KPK_4083 oxidoreductase, NAD binding YP_004114273.1 KEGG: spe:Spro_2053 LacI family transcription regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_004114274.1 KEGG: eta:ETA_33740 hypothetical protein; PFAM: Xylose isomerase domain protein TIM barrel YP_004114275.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: spe:Spro_2055 oxidoreductase domain-containing protein YP_004114276.1 KEGG: eca:ECA4478 amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004114277.1 KEGG: eca:ECA4479 amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004114278.1 KEGG: dze:Dd1591_2587 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004114279.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: similar to oxidoreductase, short chain dehydrogenase/reductase family, putative YP_004114280.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: dze:Dd1591_2589 hypothetical protein YP_004114281.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dze:Dd1591_2590 transcriptional regulator, LysR family YP_004114282.1 PFAM: aminotransferase class I and II; KEGG: dze:Dd1591_2591 aminotransferase class I and II YP_004114283.1 PFAM: LamB/YcsF family protein; KEGG: dze:Dd1591_2592 LamB/YcsF family protein YP_004114284.1 SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: eca:ECA4487 putative allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2 YP_004114285.1 KEGG: dze:Dd1591_2594 allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1 YP_004114286.1 KEGG: eca:ECA4489 putative extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004114287.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA4490 hypothetical protein YP_004114288.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: cro:ROD_43121 hypothetical protein YP_004114289.1 PFAM: major facilitator superfamily MFS_1; KEGG: cko:CKO_04628 putative sialic acid transporter YP_004114290.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: pwa:Pecwa_2743 transcriptional antiterminator, BglG YP_004114291.1 PFAM: glycoside hydrolase family 1; KEGG: pwa:Pecwa_2741 glycoside hydrolase family 1 YP_004114292.1 TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIA subunit; KEGG: similar to 4A11 antigen; sperm tail membrane antigen; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004114293.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpu:KP1_3109 putative LysR-family transcriptional regulator YP_004114294.1 PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: kpe:KPK_2298 vanillate O-demethylase oxidoreductase YP_004114295.1 KEGG: kpn:KPN_02036 putative cytosine deaminase YP_004114296.1 PFAM: Endoribonuclease L-PSP; KEGG: kpe:KPK_2296 endoribonuclease L-PSP family protein YP_004114297.1 PFAM: Creatininase; KEGG: kpe:KPK_2295 creatininase YP_004114298.1 PFAM: NMT1/THI5 like domain protein; KEGG: kpe:KPK_2294 ABC transporter, periplasmic substrate-binding protein YP_004114299.1 KEGG: kpu:KP1_3117 putative ABC transport system ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase YP_004114300.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpu:KP1_3120 putative ABC transport system inner membrane component YP_004114301.1 PFAM: FAD linked oxidase domain protein; KEGG: kpu:KP1_3121 putative FAD/FMN-containing dehydrogenases YP_004114302.1 KEGG: aci:ACIAD0203 hypothetical protein YP_004114303.1 KEGG: ctu:Ctu_40080 hypothetical protein; PFAM: glycosyl transferase family 20 YP_004114304.1 KEGG: eta:ETA_12200 potassium transport protein Kup; TIGRFAM: potassium uptake protein; PFAM: K potassium transporter YP_004114305.1 KEGG: sec:SCV43 hypothetical protein YP_004114307.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: hna:Hneap_1294 cytochrome bd ubiquinol oxidase subunit I YP_004114308.1 PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: hna:Hneap_1295 cytochrome d ubiquinol oxidase, subunit II YP_004114309.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: hna:Hneap_1292 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; SMART: AAA ATPase YP_004114310.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: hna:Hneap_1293 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; SMART: AAA ATPase YP_004114312.1 KEGG: stm:STM1092 putative cytoplasmic protein YP_004114313.1 KEGG: eta:ETA_29890 putative transcriptional regulator YP_004114314.1 KEGG: eta:ETA_29880 thiol:disulfide interchange protein precursor; PFAM: cytochrome c biogenesis protein transmembrane region YP_004114315.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: ent:Ent638_0324 divalent-cation tolerance protein CutA YP_004114316.1 KEGG: dze:Dd1591_3533 anaerobic C4-dicarboxylate antiporter, Dcu family; TIGRFAM: anaerobic c4-dicarboxylate antiporter, Dcu family; PFAM: anaerobic c4-dicarboxylate membrane transporter YP_004114317.1 KEGG: ctu:Ctu_37170 aspartate ammonia-lyase; TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like YP_004114318.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: eta:ETA_29850 suppressor of F plasmid exlusion of phage T7 YP_004114319.1 PFAM: Chaperonin Cpn10; KEGG: spe:Spro_0408 co-chaperonin GroES YP_004114320.1 KEGG: eta:ETA_29830 60 kDa chaperonin (protein Cpn60); TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_004114321.1 KEGG: eta:ETA_29820 putative lipoprotein YP_004114322.1 TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: eta:ETA_29810 hypothetical protein; PFAM: Radical SAM domain protein YP_004114323.1 KEGG: dze:Dd1591_0376 translation elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW domain protein; Elongation factor P/YeiP protein YP_004114324.1 PFAM: Entericidin EcnAB; KEGG: set:SEN4105 entericidin A precursor YP_004114325.1 PFAM: Entericidin EcnAB; KEGG: eta:ETA_29790 entericidin B YP_004114326.1 KEGG: spe:Spro_0420 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase-related protein GenX; PFAM: tRNA synthetase class II (D K and N) YP_004114327.1 TIGRFAM: periplasmic serine protease DegS; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: ent:Ent638_3670 serine endoprotease; SMART: PDZ/DHR/GLGF domain protein YP_004114328.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: spe:Spro_4352 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_004114329.1 PFAM: protein of unknown function DUF1043; KEGG: eta:ETA_03010 cytochrome d ubiquinol oxidase subunit III YP_004114330.1 PFAM: AFG1-family ATPase; KEGG: eta:ETA_03020 hypothetical protein YhcM YP_004114331.1 KEGG: eta:ETA_03030 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13 YP_004114332.1 PFAM: ribosomal protein S9; KEGG: eta:ETA_03040 30S ribosomal protein S9 YP_004114333.1 PFAM: Glutathione S-transferase domain; KEGG: eta:ETA_03050 stringent starvation protein A YP_004114334.1 PFAM: Stringent starvation protein B; KEGG: eta:ETA_03060 stringent starvation protein B YP_004114335.1 PFAM: flavodoxin/nitric oxide synthase; FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: eta:ETA_03070 sulfite reductase YP_004114336.1 KEGG: eta:ETA_03080 glutamate synthase (NADPH); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein YP_004114338.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; KEGG: eta:ETA_03090 aerobic respiration control sensor protein ArcB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver; Hpt domain protein YP_004114339.1 KEGG: esa:ESA_03600 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51 YP_004114340.1 KEGG: eta:ETA_03110 phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr); TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_004114341.1 PFAM: conserved hypothetical protein; KEGG: ctu:Ctu_03730 UPF0042 protein CKO_04608 YP_004114342.1 KEGG: efe:EFER_3181 PTS IIA-like nitrogen-regulatory protein PtsN; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_004114343.1 KEGG: eta:ETA_03140 putative sigma(54) modulation protein; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_004114344.1 KEGG: eta:ETA_03150 RNA polymerase factor sigma-54; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor YP_004114345.1 KEGG: eta:ETA_03160 putative ABC transporter ATP-binding protein YhbG; PFAM: ABC transporter related; SMART: AAA ATPase YP_004114346.1 KEGG: eta:ETA_03170 lipopolysaccharide transport periplasmic protein LptA; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein YP_004114347.1 PFAM: protein of unknown function DUF1239; KEGG: eta:ETA_03180 hypothetical protein YP_004114348.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: spe:Spro_4363 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004114349.1 TIGRFAM: KpsF/GutQ family protein; KEGG: eta:ETA_03200 D-arabinose 5-phosphate isomerase; PFAM: sugar isomerase (SIS); CBS domain containing protein YP_004114350.1 KEGG: eta:ETA_03210 putative calcium/sodium:proton antiporter; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region YP_004114351.1 KEGG: eta:ETA_03220 putative ABC transporter ATP-binding protein YrbF; PFAM: ABC transporter related; SMART: AAA ATPase YP_004114352.1 PFAM: protein of unknown function DUF140; KEGG: eta:ETA_03230 ABC transporter, permease subunit, probable toluene tolerance protein YP_004114353.1 PFAM: Mammalian cell entry related domain protein; KEGG: pct:PC1_0283 mammalian cell entry related domain protein YP_004114354.1 PFAM: toluene tolerance family protein; KEGG: esa:ESA_03585 hypothetical protein YP_004114355.1 KEGG: eta:ETA_03260 anti-sigma B factor antagonist YP_004114356.1 KEGG: eta:ETA_03270 putative transcriptional regulator (BolA family); manually curated; PFAM: BolA family protein YP_004114357.1 KEGG: esa:ESA_03582 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_004114358.1 manually curated; KEGG: ddc:Dd586_0802 putative transcriptional regulator, Nlp YP_004114359.1 PFAM: Polyprenyl synthetase; KEGG: eta:ETA_03300 octaprenyl diphosphate synthase YP_004114360.1 KEGG: eta:ETA_03310 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21 YP_004114361.1 KEGG: ctu:Ctu_03940 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27 YP_004114362.1 KEGG: eta:ETA_03340 GTPase ObgE; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related YP_004114363.1 PFAM: thioesterase superfamily protein; KEGG: ses:SARI_02337 hypothetical protein YP_004114364.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cro:ROD_06051 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase YP_004114365.1 KEGG: esa:ESA_00798 hypothetical protein; PFAM: isochorismatase hydrolase; phosphopantetheine-binding YP_004114366.1 KEGG: esa:ESA_00797 enterobactin synthase subunit E; TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase; PFAM: AMP-dependent synthetase and ligase YP_004114367.1 KEGG: spe:Spro_3421 isochorismate synthase; TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like YP_004114368.1 PFAM: periplasmic binding protein; KEGG: spe:Spro_3422 iron-enterobactin transporter periplasmic binding protein YP_004114369.1 PFAM: major facilitator superfamily MFS_1; KEGG: ecl:EcolC_3053 enterobactin exporter EntS YP_004114370.1 PFAM: transport system permease protein; KEGG: eoj:ECO26_0665 ferric enterobactin (enterochelin) transport FepD YP_004114371.1 PFAM: transport system permease protein; KEGG: cko:CKO_02572 iron-enterobactin transporter permease YP_004114372.1 KEGG: similar to CG10226 CG10226-PA; PFAM: ABC transporter related; SMART: AAA ATPase YP_004114373.1 KEGG: spe:Spro_3427 enterobactin synthase subunit F; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Thioesterase YP_004114374.1 PFAM: MbtH domain protein; KEGG: spe:Spro_3428 MbtH domain-containing protein YP_004114375.1 PFAM: putative esterase; KEGG: esa:ESA_02729 enterobactin/ferric enterobactin esterase YP_004114376.1 KEGG: kpe:KPK_5226 outer membrane receptor FepA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004114377.1 KEGG: eta:ETA_03350 sensor protein BasS/PmrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004114378.1 KEGG: esa:ESA_03574 DNA-binding transcriptional regulator BasR; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_004114379.1 TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: eta:ETA_03370 D-alanyl-D-alanine carboxypeptidase/endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C YP_004114380.1 KEGG: eta:ETA_03380 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein YP_004114381.1 PFAM: protein of unknown function UPF0044; KEGG: ses:SARI_04327 RNA-binding protein YhbY YP_004114382.1 KEGG: ctu:Ctu_04020 ribosomal RNA large subunit methyltransferase J; TIGRFAM: ribosomal RNA large subunit methyltransferase J; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ YP_004114383.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: sea:SeAg_B3485 ATP-dependent metalloprotease; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular YP_004114384.1 TIGRFAM: dihydropteroate synthase; KEGG: eta:ETA_03420 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_004114385.1 KEGG: eta:ETA_03430 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_004114386.1 KEGG: eta:ETA_03440 preprotein translocase subunit SecG; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit YP_004114387.1 PFAM: protein of unknown function DUF150; KEGG: eta:ETA_03450 YhbC-like protein YP_004114388.1 KEGG: kpu:KP1_4887 transcription elongation factor; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein YP_004114389.1 KEGG: eta:ETA_03470 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; Initiation factor 2 associated domain protein ; translation initiation factor IF-2 domain protein; elongation factor Tu domain 2 protein YP_004114390.1 KEGG: eta:ETA_03480 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A YP_004114391.1 KEGG: ctu:Ctu_04120 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B YP_004114392.1 KEGG: pct:PC1_0588 ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15 YP_004114393.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: ssn:SSON_3310 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein YP_004114394.1 KEGG: eta:ETA_03520 lipoprotein NlpI; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat YP_004114395.1 KEGG: eta:ETA_03530 ATP-dependent RNA helicase DeaD; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004114396.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: msl:Msil_0061 short-chain dehydrogenase/reductase SDR YP_004114397.1 KEGG: atc:AGR_C_3663 hypothetical protein; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004114398.1 KEGG: eta:ETA_03540 hypothetical protein; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup YP_004114399.1 PFAM: peptidase U32; KEGG: ctu:Ctu_04200 uncharacterized protein YhbV YP_004114400.1 PFAM: peptidase U32; KEGG: stm:STM3274 putative protease YP_004114401.1 PFAM: Sterol-binding domain protein; KEGG: pwa:Pecwa_0819 sterol-binding domain protein YP_004114402.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ypb:YPTS_0527 GCN5-related N-acetyltransferase YP_004114403.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: ypi:YpsIP31758_3578 GIY-YIG nuclease superfamily protein YP_004114404.1 KEGG: ddc:Dd586_0358 hypothetical protein YP_004114405.1 PFAM: permease; KEGG: ssn:SSON_3297 hypothetical protein YP_004114406.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: ddc:Dd586_0359 anaerobic ribonucleoside-triphosphate reductase activating protein YP_004114407.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; KEGG: esa:ESA_00260 anaerobic ribonucleoside triphosphate reductase; PFAM: formate C-acetyltransferase glycine radical; ATP-cone domain protein YP_004114408.1 KEGG: spe:Spro_0536 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Beta-N-acetylhexosaminidase-like YP_004114409.1 KEGG: eta:ETA_03610 putative endoribonuclease; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP YP_004114410.1 KEGG: eta:ETA_03620 aspartate carbamoyltransferase regulatory subunit; TIGRFAM: aspartate carbamoyltransferase, regulatory subunit; PFAM: Aspartate carbamoyltransferase regulatory subunit-like YP_004114411.1 TIGRFAM: aspartate carbamoyltransferase; KEGG: eta:ETA_03630 aspartate carbamoyltransferase catalytic subunit; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_004114412.1 TIGRFAM: ornithine carbamoyltransferase; KEGG: eta:ETA_03640 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain YP_004114413.1 PFAM: protein of unknown function DUF1260; KEGG: eta:ETA_03650 hypothetical protein YP_004114414.1 PFAM: tRNA-hydroxylase; KEGG: ctu:Ctu_04970 tRNA-hydroxylase YP_004114415.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kpu:KP1_0543 putative acetyltransferase YP_004114416.1 KEGG: cko:CKO_03542 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase YP_004114417.1 KEGG: eta:ETA_03690 DNA polymerase III subunit chi; PFAM: DNA polymerase III chi subunit HolC YP_004114418.1 KEGG: eta:ETA_03700 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein YP_004114419.1 PFAM: permease YjgP/YjgQ family protein; KEGG: eta:ETA_03710 putative permease YP_004114420.1 PFAM: permease YjgP/YjgQ family protein; KEGG: cko:CKO_03536 hypothetical protein YP_004114421.1 PFAM: protein of unknown function DUF445; KEGG: cro:ROD_48251 hypothetical protein YP_004114422.1 PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: ent:Ent638_3654 protein of unknown function DUF853, NPT hydrolase putative YP_004114423.1 PFAM: extracellular solute-binding protein family 5; KEGG: eta:ETA_25780 ABC transporter, periplasmic oligopeptide-binding protein YP_004114424.1 KEGG: bbr:BB1475 hypothetical protein YP_004114425.1 KEGG: spe:Spro_2015 gluconate 2-dehydrogenase (acceptor) YP_004114426.1 KEGG: cro:ROD_10541 putative gluconate dehydrogenase subunit; PFAM: cytochrome c class I YP_004114427.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: cko:CKO_01550 multiple drug resistance protein MarC YP_004114428.1 KEGG: suppressor of glycerol defect protein, putative YP_004114429.1 PFAM: Protein of unknown function DUF2501; KEGG: eta:ETA_03760 putative glycoprotein/receptor YjjA YP_004114430.1 PFAM: high-affinity nickel-transporter; KEGG: ent:Ent638_0316 high-affinity nickel-transporter YP_004114431.1 KEGG: kpe:KPK_0684 transcriptional regulator, AraC family; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004114432.1 PFAM: protein of unknown function DUF1493; KEGG: see:SNSL254_A1663 hypothetical protein YP_004114433.1 KEGG: kpe:KPK_4873 NAD(P)H dehydrogenase (quinone) family; PFAM: NAD(P)H dehydrogenase (quinone) YP_004114434.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_4872 transcriptional regulator, LysR family YP_004114435.1 PFAM: protein of unknown function DUF1176; KEGG: ctu:Ctu_21090 hypothetical protein YP_004114436.1 KEGG: ctu:Ctu_24330 uncharacterized protein YecA; TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein YP_004114437.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: kpu:KP1_2700 putative 2OG-Fe(II) oxygenase YP_004114438.1 PFAM: NLPA lipoprotein; KEGG: dda:Dd703_1341 NlpA lipoprotein YP_004114439.1 KEGG: eta:ETA_26710 hypothetical protein YP_004114440.1 KEGG: bpt:Bpet2921 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004114441.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bpt:Bpet2920 GNAT family acetyltransferase YP_004114442.1 KEGG: xfm:Xfasm12_1484 hypothetical protein YP_004114443.1 PFAM: amino acid permease-associated region; KEGG: aac:Aaci_1000 amino acid permease-associated region YP_004114444.1 KEGG: esa:ESA_03398 phosphoglycerol transferase I; PFAM: sulfatase YP_004114445.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: spe:Spro_3857 4-oxalocrotonate tautomerase YP_004114446.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3856 LysR family transcriptional regulator YP_004114447.1 KEGG: aav:Aave_0270 mannosyltransferase OCH1-related enzyme YP_004114448.1 KEGG: aba:Acid345_1165 hypothetical protein YP_004114449.1 PFAM: Phosphoglycerate mutase; KEGG: eta:ETA_05970 hypothetical protein YP_004114450.1 PFAM: General substrate transporter; KEGG: eta:ETA_05980 major facilitator family transporter YP_004114451.1 KEGG: eta:ETA_05990 putative LacI-family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004114452.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: eta:ETA_06000 putative nucleoside hydrolase YP_004114453.1 PFAM: major facilitator superfamily MFS_1; KEGG: sek:SSPA2208 putative metabolite transport protein YP_004114454.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: kpu:KP1_0779 hypothetical protein YP_004114455.1 PFAM: ferric iron reductase; KEGG: ecx:EcHS_A4600 ferric iron reductase involved in ferric hydroximate transport YP_004114456.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: eta:ETA_06040 HmsT (hemin storage system protein); SMART: GGDEF domain containing protein YP_004114457.1 PFAM: protein of unknown function DUF1435; KEGG: eta:ETA_06050 hypothetical protein YP_004114458.1 KEGG: eta:ETA_06060 16S ribosomal RNA m2G1207 methyltransferase; PFAM: methyltransferase small; Methyltransferase small domain protein YP_004114459.1 KEGG: eta:ETA_06070 DNA polymerase III, psi subunit; manually curated; PFAM: DNA polymerase III psi subunit YP_004114460.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; KEGG: eta:ETA_06080 ribosomal-protein-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004114461.1 KEGG: ctu:Ctu_05880 5'-nucleotidase YjjG; TIGRFAM: HAD superfamily (subfamily IA) hydrolase, TIGR02254; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004114462.1 PFAM: HipA domain protein; KEGG: eta:ETA_06700 hypothetical protein YP_004114463.1 PFAM: Virulence factor, haemolysin regulator; KEGG: eta:ETA_06710 hypothetical protein YP_004114464.1 TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: eta:ETA_06720 phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004114465.1 KEGG: eta:ETA_06730 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase YP_004114466.1 TIGRFAM: nicotinamide-nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: helix-turn-helix domain protein; KEGG: sfv:SFV_4424 nicotinamide-nucleotide adenylyltransferase; SMART: helix-turn-helix domain protein YP_004114467.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcm:Bcenmc03_4428 major facilitator transporter YP_004114468.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bch:Bcen2424_3214 mandelate racemase/muconate lactonizing protein YP_004114469.1 KEGG: seh:SeHA_C4991 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004114470.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: tau:Tola_1779 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_004114471.1 KEGG: eta:ETA_06810 deoxyribose operon repressor; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004114472.1 KEGG: esa:ESA_00230 hypothetical protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004114473.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; KEGG: eca:ECA2148 putative ABC transport ATP-binding subunit; SMART: AAA ATPase YP_004114474.1 KEGG: pct:PC1_2158 UreA ABC transporter, ATP-binding protein UrtD; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related YP_004114475.1 KEGG: pct:PC1_2159 UreA ABC transporter, permease protein UrtC; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator YP_004114476.1 KEGG: eca:ECA2145 putative branched-chain amino acid transport system, permease component; TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator YP_004114477.1 KEGG: pct:PC1_2161 UreA ABC transporter, UreA binding protein; TIGRFAM: urea ABC transporter, urea binding protein; PFAM: Extracellular ligand-binding receptor YP_004114478.1 KEGG: eca:ECA2143 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004114479.1 TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; Allophanate hydrolase subunit 1; biotin/lipoyl attachment domain-containing protein; KEGG: pct:PC1_2163 UreA carboxylase; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1 YP_004114480.1 KEGG: eta:ETA_06890 allophanate hydrolase; TIGRFAM: allophanate hydrolase; PFAM: Amidase YP_004114481.1 PFAM: Lytic transglycosylase catalytic; KEGG: eta:ETA_06900 lytic murein transglycosylase YP_004114482.1 KEGG: eta:ETA_06910 Trp operon repressor; TIGRFAM: trp operon repressor; PFAM: Trp repressor YP_004114483.1 PFAM: protein of unknown function DUF84; KEGG: eta:ETA_06920 NTPase YP_004114484.1 PFAM: Phosphoglycerate mutase; KEGG: eta:ETA_06930 phosphoglycerate mutase YP_004114485.1 KEGG: eta:ETA_06940 right origin-binding protein; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004114486.1 PFAM: CreA family protein; KEGG: eta:ETA_06950 hypothetical protein YP_004114487.1 KEGG: eta:ETA_06960 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_004114488.1 KEGG: ctu:Ctu_06280 uncharacterized tRNA/rRNA methyltransferase LasT; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_004114489.1 KEGG: eta:ETA_06980 bifunctional aspartokinase I/homeserine dehydrogenase I; TIGRFAM: aspartate kinase; PFAM: homoserine dehydrogenase; aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding YP_004114490.1 KEGG: pwa:Pecwa_3862 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_004114491.1 TIGRFAM: threonine synthase; KEGG: eta:ETA_07000 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004114492.1 PFAM: protein of unknown function DUF328; KEGG: eta:ETA_07010 conserved hypothetical protein YaaA YP_004114493.1 KEGG: eta:ETA_07020 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase YP_004114494.1 KEGG: ent:Ent638_0571 molybdenum cofactor biosynthesis protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain YP_004114495.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0690 major facilitator transporter YP_004114496.1 PFAM: GPR1/FUN34/yaaH family protein; KEGG: esa:ESA_03327 hypothetical protein YP_004114497.1 KEGG: eta:ETA_07050 chaperone protein DnaK (heat shock 70 kDa protein); TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_004114498.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; KEGG: ctu:Ctu_06400 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein YP_004114499.1 KEGG: eta:ETA_07080 Na(+)/H(+) antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA YP_004114500.1 PFAM: regulatory protein LysR; KEGG: ctu:Ctu_06480 transcriptional activator protein NhaR YP_004114501.1 KEGG: eta:ETA_07100 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20 YP_004114502.1 TIGRFAM: riboflavin biosynthesis protein RibF; KEGG: eta:ETA_07110 riboflavin biosynthesis protein; PFAM: FAD synthetase; Riboflavin kinase YP_004114503.1 KEGG: eta:ETA_07120 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase YP_004114504.1 TIGRFAM: lipoprotein signal peptidase; KEGG: eta:ETA_07130 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II YP_004114505.1 KEGG: eta:ETA_07140 probable FKBX-type 16kD peptidyl-prolyl cis-trans isomerase (A rotamase); PFAM: peptidylprolyl isomerase FKBP-type YP_004114506.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: eta:ETA_07150 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein YP_004114507.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: eta:ETA_07160 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_004114508.1 KEGG: cro:ROD_00351 carbamoyl-phosphate synthase small chain; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I YP_004114509.1 KEGG: pct:PC1_3647 carbamoyl-phosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein YP_004114510.1 KEGG: kpu:KP1_1355 putative outer membrane protein YP_004114511.1 KEGG: eta:ETA_07210 dihydrofolate reductase; PFAM: dihydrofolate reductase region YP_004114512.1 KEGG: spe:Spro_0722 diadenosine tetraphosphatase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); PFAM: metallophosphoesterase YP_004114513.1 PFAM: ApaG domain protein; KEGG: eta:ETA_07230 ApaG YP_004114514.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: eta:ETA_07240 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like YP_004114515.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: eta:ETA_07250 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA YP_004114516.1 PFAM: SurA domain; PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: eta:ETA_07260 peptidyl-prolyl cis-trans isomerase SurA YP_004114517.1 PFAM: Organic solvent tolerance protein; OstA family protein; KEGG: eta:ETA_07270 organic solvent tolerance protein YP_004114518.1 KEGG: eta:ETA_07280 Dna-J like membrane chaperone protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_004114519.1 PFAM: pseudouridine synthase; KEGG: sdy:SDY_0082 23S rRNA/tRNA pseudouridine synthase A YP_004114520.1 KEGG: eta:ETA_07300 ATP-dependent helicase HepA; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004114521.1 KEGG: eta:ETA_07310 DNA polymerase II; PFAM: DNA polymerase B region; DNA polymerase B exonuclease; SMART: DNA-directed DNA polymerase B YP_004114522.1 PFAM: SNARE associated Golgi protein; KEGG: eta:ETA_07320 conserved hypothetical protein YabI YP_004114523.1 TIGRFAM: ABC transporter, ATPase subunit, ThiQ subfamily; PFAM: ABC transporter related; KEGG: eta:ETA_07330 thiamine transporter ATP-binding subunit; SMART: AAA ATPase YP_004114524.1 KEGG: eta:ETA_07340 thiamine transporter membrane protein; TIGRFAM: thiamine ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004114525.1 KEGG: kpn:KPN_00067 thiamine transporter substrate binding subunit; TIGRFAM: thiamine ABC transporter, periplasmic binding protein; ABC transporter, periplasmic binding protein, thiB subfamily; PFAM: extracellular solute-binding protein family 1 YP_004114526.1 PFAM: extracellular solute-binding protein family 5; KEGG: eta:ETA_07370 transcriptional regulator SgrR YP_004114527.1 PFAM: major facilitator superfamily MFS_1; KEGG: eta:ETA_07380 sugar efflux transporter YP_004114528.1 KEGG: ddc:Dd586_3550 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein YP_004114529.1 KEGG: dze:Dd1591_0592 3-isopropylmalate dehydratase, large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein YP_004114530.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: ctu:Ctu_07060 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004114531.1 KEGG: eta:ETA_07420 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain YP_004114532.1 KEGG: eta:ETA_07430 acetolactate synthase isozyme III large subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding YP_004114533.1 TIGRFAM: acetolactate synthase, small subunit; KEGG: dda:Dd703_0635 acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_004114534.1 TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: eta:ETA_07450 DNA-binding transcriptional regulator FruR; SMART: regulatory protein LacI YP_004114536.1 KEGG: eca:ECA3824 cell division protein MraZ; TIGRFAM: MraZ protein; PFAM: MraZ domain YP_004114537.1 KEGG: eta:ETA_07470 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_004114538.1 KEGG: eta:ETA_07480 cell division protein FtsL; TIGRFAM: cell division protein FtsL; PFAM: cell division protein FtsL YP_004114539.1 KEGG: pwa:Pecwa_3786 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_004114540.1 KEGG: eta:ETA_07500 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004114541.1 KEGG: pct:PC1_3596 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D -alanyl ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004114542.1 KEGG: cko:CKO_03288 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_004114543.1 KEGG: spe:Spro_0759 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004114544.1 KEGG: eta:ETA_07540 cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein YP_004114545.1 KEGG: cko:CKO_03285 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain YP_004114546.1 KEGG: eta:ETA_07560 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_004114547.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: eta:ETA_07570 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein YP_004114548.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: eta:ETA_07580 cell division protein FtsQ YP_004114549.1 KEGG: eta:ETA_07590 cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA YP_004114550.1 KEGG: spe:Spro_0766 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain YP_004114551.1 KEGG: ent:Ent638_0642 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_004114552.1 PFAM: secretion monitor family proten; KEGG: eta:ETA_07630 SecA regulator SecM YP_004114553.1 KEGG: cko:CKO_03277 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein YP_004114554.1 KEGG: eta:ETA_07950 mutator protein MutT (7,8-dihydro-8-oxoguanine-triphosphatase); TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase YP_004114555.1 PFAM: protein of unknown function DUF329; KEGG: kpe:KPK_4637 zinc-binding protein YacG YP_004114556.1 PFAM: protein of unknown function DUF1342; KEGG: stm:STM0139 hypothetical protein YP_004114557.1 KEGG: eca:ECA3802 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_004114558.1 KEGG: spe:Spro_0775 guanosine 5'-monophosphate oxidoreductase; TIGRFAM: guanosine monophosphate reductase; PFAM: IMP dehydrogenase/GMP reductase YP_004114559.1 PFAM: Type II secretion system F domain; KEGG: eta:ETA_08000 type IV pilin biogenesis protein YP_004114560.1 PFAM: type II secretion system protein E; KEGG: eta:ETA_08010 hypothetical protein YP_004114561.1 KEGG: eta:ETA_08020 putative major pilin subunit YP_004114562.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: spe:Spro_0779 quinolinate phosphoribosyltransferase; PFAM: Quinolinate phosphoribosyl transferase YP_004114563.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: dze:Dd1591_0630 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_004114564.1 KEGG: eta:ETA_08070 regulatory protein AmpE YP_004114565.1 KEGG: hypothetical protein LOC100162058; PFAM: glycoside hydrolase family 43 YP_004114566.1 KEGG: eta:ETA_08110 hypothetical protein; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1 YP_004114567.1 PFAM: amino acid permease-associated region; KEGG: eta:ETA_08120 aromatic amino acid transporter YP_004114568.1 KEGG: eta:ETA_08130 transcriptional regulator PdhR; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH YP_004114569.1 KEGG: kpu:KP1_0941 pyruvate dehydrogenase E1 component; TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; PFAM: Transketolase domain protein YP_004114570.1 KEGG: esa:ESA_03222 dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_004114571.1 KEGG: ctu:Ctu_07510 dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004114572.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mes:Meso_2943 LysR family transcriptional regulator YP_004114573.1 PFAM: aldo/keto reductase; KEGG: kpe:KPK_2976 oxidoreductase, aldo/keto reductase family YP_004114574.1 TIGRFAM: aconitate hydratase 2; KEGG: eta:ETA_08280 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; PFAM: Aconitase B; aconitate hydratase domain protein YP_004114575.1 PFAM: Spore coat U domain protein; KEGG: pag:PLES_50341 hypothetical protein YP_004114576.1 PFAM: Spore coat U domain protein; KEGG: pau:PA14_61520 hypothetical protein YP_004114577.1 KEGG: pag:PLES_50371 putative pili assembly chaperone YP_004114578.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eca:ECA3076 putative fimbrial usher protein YP_004114579.1 PFAM: Spore coat U domain protein; KEGG: pag:PLES_50391 hypothetical protein YP_004114580.1 PFAM: conserved hypothetical protein; KEGG: kpe:KPK_4613 hypothetical protein YP_004114581.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_4070 major facilitator transporter YP_004114582.1 KEGG: bcl:ABC1230 hypothetical protein YP_004114583.1 KEGG: sro:Sros_5542 hypothetical protein YP_004114584.1 KEGG: bbr:BB0409 hypothetical protein YP_004114585.1 PFAM: major facilitator superfamily MFS_1; KEGG: sen:SACE_4606 major facilitator superfamily transporter phthalate permease YP_004114586.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpu:KP1_2665 probable transport transmembrane protein YP_004114587.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: kpu:KP1_2666 D-isomer specific 2-hydroxyacid dehydrogenase YP_004114588.1 PFAM: dihydrodipicolinate synthetase; KEGG: ecp:ECP_0695 putative dihydrodipicolinate synthase protein YP_004114589.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: ddc:Dd586_3495 iron-containing alcohol dehydrogenase YP_004114590.1 PFAM: type III effector Hrp-dependent outers; KEGG: eca:ECA3761 hypothetical protein YP_004114591.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: ddc:Dd586_3493 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA YP_004114592.1 KEGG: dze:Dd1591_0650 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004114593.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Ferric reductase domain protein transmembrane component domain; FAD-binding 8 domain protein; KEGG: ana:all2633 hypothetical protein YP_004114594.1 TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; KEGG: eta:ETA_08300 S-adenosylmethionine decarboxylase; PFAM: S-adenosylmethionine decarboxylase related YP_004114595.1 KEGG: eta:ETA_08310 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase YP_004114596.1 KEGG: eta:ETA_08320 hypothetical protein YP_004114597.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: eta:ETA_08330 multicopper oxidase YP_004114598.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rlt:Rleg2_4673 methionine gamma-lyase YP_004114599.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: spe:Spro_3998 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004114600.1 KEGG: ssn:SSON_0135 putative ATP-binding component of a transport system; PFAM: ABC transporter related; SMART: AAA ATPase YP_004114601.1 PFAM: ABC-2 type transporter; KEGG: eta:ETA_08540 ABC transporter integral membrane protein YP_004114602.1 TIGRFAM: aspartate 1-decarboxylase; KEGG: eta:ETA_08550 aspartate alpha-decarboxylase; PFAM: aspartate decarboxylase YP_004114603.1 KEGG: eta:ETA_08560 pantoate-beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_004114604.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: eta:ETA_08570 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_004114605.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: eta:ETA_08580 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_004114606.1 KEGG: eta:ETA_08590 poly(A) polymerase I; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region YP_004114607.1 PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: ecm:EcSMS35_0155 glutamyl-Q tRNA(Asp) synthetase YP_004114608.1 KEGG: cro:ROD_01491 dosage-dependent DnaK suppressor protein; TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type YP_004114609.1 KEGG: eta:ETA_08620 sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein YP_004114610.1 KEGG: esa:ESA_03193 hypothetical protein; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX YP_004114611.1 TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase domain protein; DEAD/DEAH box helicase domain protein; helicase-associated domain protein; KEGG: eta:ETA_08630 ATP-dependent RNA helicase HrpB; SMART: DEAD-like helicase ; helicase domain protein YP_004114612.1 TIGRFAM: penicillin-binding protein 1B; KEGG: eta:ETA_08640 penicillin-binding protein 1B; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_004114613.1 KEGG: eta:ETA_08750 ferrichrome outer membrane transporter; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004114614.1 KEGG: kpu:KP1_1003 hydroxamate-dependent iron transport system ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase YP_004114615.1 PFAM: periplasmic binding protein; KEGG: spe:Spro_3977 iron-hydroxamate transporter substrate-binding subunit YP_004114616.1 PFAM: transport system permease protein; KEGG: eta:ETA_08780 iron-hydroxamate transporter permease subunit YP_004114617.1 KEGG: yen:YE0734 glutamate-1-semialdehyde aminotransferase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III YP_004114618.1 KEGG: pwa:Pecwa_1176 iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_004114619.1 KEGG: spe:Spro_0784 putative lipoprotein YP_004114620.1 PFAM: periplasmic binding protein; KEGG: ctu:Ctu_07890 vitamin B12-binding protein YP_004114621.1 TIGRFAM: MTA/SAH nucleosidase; KEGG: eta:ETA_08820 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; PFAM: purine or other phosphorylase family 1 YP_004114622.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; KEGG: dda:Dd703_2806 deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain YP_004114623.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: yen:YE0741 serine endoprotease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_004114624.1 PFAM: sugar diacid recognition domain protein; KEGG: ddc:Dd586_3126 transcriptional regulator, CdaR YP_004114625.1 KEGG: pwa:Pecwa_0310 hypothetical protein YP_004114626.1 KEGG: eta:ETA_08850 hypothetical protein YP_004114627.1 TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: esa:ESA_03177 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_004114628.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: protein-P-II uridylyltransferase; KEGG: eta:ETA_08870 PII uridylyl-transferase; PFAM: GlnD PII-uridylyltransferase; DNA polymerase beta domain protein region; metal-dependent phosphohydrolase HD sub domain; amino acid-binding ACT domain protein YP_004114629.1 KEGG: eta:ETA_08880 methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_004114630.1 KEGG: sdy:SDY_0185 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2 YP_004114631.1 KEGG: eta:ETA_08910 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein YP_004114632.1 KEGG: eta:ETA_08920 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004114633.1 KEGG: ctu:Ctu_08000 ribosome-recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor YP_004114634.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: eta:ETA_08940 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein YP_004114635.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: eta:ETA_08950 undecaprenyl pyrophosphate synthetase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_004114636.1 PFAM: phosphatidate cytidylyltransferase; KEGG: eta:ETA_08960 CDP-diglyceride synthase YP_004114637.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: eta:ETA_08970 zinc metallopeptidase RseP; SMART: PDZ/DHR/GLGF domain protein YP_004114638.1 KEGG: eta:ETA_08980 outer membrane protein assembly factor YaeT; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein YP_004114639.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: eta:ETA_08990 periplasmic chaperone YP_004114640.1 KEGG: eta:ETA_09000 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein YP_004114641.1 KEGG: eta:ETA_09010 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004114642.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: ctu:Ctu_08090 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam ine O-acyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_004114643.1 TIGRFAM: lipid-A-disaccharide synthase; KEGG: eta:ETA_09030 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19 YP_004114644.1 KEGG: eta:ETA_09040 ribonuclease HII; PFAM: ribonuclease HII/HIII YP_004114645.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: cro:ROD_01871 DNA polymerase III alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type YP_004114646.1 KEGG: eta:ETA_09060 acetyl-CoA carboxylase carboxyltransferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region YP_004114647.1 KEGG: eta:ETA_09070 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein YP_004114648.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: eic:NT01EI_0856 hypothetical protein YP_004114649.1 KEGG: eta:ETA_09090 tRNA(Ile)-lysidine synthase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase YP_004114650.1 PFAM: cytochrome c class I; KEGG: eta:ETA_09100 cytochrome precursor YP_004114651.1 PFAM: Modulator of Rho-dependent transcription termination; KEGG: eta:ETA_09110 Rho-binding antiterminator protein YP_004114652.1 PFAM: protein of unknown function UPF0253; KEGG: stm:STM0238 hypothetical protein YP_004114653.1 PFAM: Class I peptide chain release factor; KEGG: cko:CKO_03174 peptidyl-tRNA hydrolase domain protein YP_004114654.1 KEGG: eta:ETA_09150 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein YP_004114655.1 PFAM: protein of unknown function UPF0066; KEGG: eta:ETA_09160 hypothetical protein YP_004114656.1 KEGG: eta:ETA_09170 regulator in colanic acid synthesis; overexpression confers mucoid phenotype, increases capsule synthesis YP_004114657.1 KEGG: spe:Spro_3755 DL-methionine transporter substrate-binding subunit; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein YP_004114658.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_09190 DL-methionine transporter permease subunit YP_004114659.1 TIGRFAM: D-methionine ABC transporter, ATPase subunit; PFAM: ABC transporter related; NIL domain; KEGG: eta:ETA_09200 DL-methionine transporter ATP-binding subunit; SMART: AAA ATPase YP_004114660.1 KEGG: ddc:Dd586_3295 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004114661.1 PFAM: aldo/keto reductase; KEGG: set:SEN0257 2,5-diketo-D-gluconate reductase B YP_004114662.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ctu:Ctu_08320 uncharacterized HTH-type transcriptional regulator YafC YP_004114663.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpe:KPK_4511 transporter, major facilitator family YP_004114664.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: eta:ETA_26410 hypothetical protein YP_004114665.1 manually curated; PFAM: Lytic transglycosylase catalytic; MLTD_N domain protein; Peptidoglycan-binding lysin domain; KEGG: eta:ETA_26380 membrane-bound lytic murein transglycosylase D; SMART: Peptidoglycan-binding LysM YP_004114666.1 TIGRFAM: hydroxyacylglutathione hydrolase; KEGG: eta:ETA_26370 putative hydroxyacylglutathione hydrolase YP_004114667.1 PFAM: Methyltransferase type 11; KEGG: eta:ETA_26360 hypothetical protein YP_004114668.1 KEGG: kpe:KPK_4506 ribonuclease H; PFAM: ribonuclease H YP_004114669.1 SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: eta:ETA_26340 DNA polymerase III subunit epsilon; PFAM: Exonuclease RNase T and DNA polymerase III YP_004114670.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: kpe:KPK_2569 permease, cytosine/purine, uracil, thiamine, allantoin family YP_004114671.1 KEGG: eta:ETA_26320 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004114672.1 KEGG: eta:ETA_26310 Asp/Glu racemase; PFAM: Asp/Glu/hydantoin racemase YP_004114673.1 TIGRFAM: urate catabolism protein; KEGG: eta:ETA_26300 putative polysaccharide deacetylase; PFAM: polysaccharide deacetylase YP_004114674.1 KEGG: eta:ETA_26270 hypothetical protein YP_004114675.1 KEGG: eta:ETA_26260 amidase; TIGRFAM: amidohydrolase, AtzE family; PFAM: Amidase YP_004114676.1 KEGG: eta:ETA_26250 hypothetical protein YP_004114677.1 KEGG: eta:ETA_26240 gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase YP_004114678.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: eta:ETA_26220 putative transcriptional regulator YP_004114679.1 KEGG: kpu:KP1_2814 cysteine ABC transport system periplasmic substrate-binding component; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004114680.1 KEGG: eta:ETA_26200 putative amino acid ABC transporter, permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004114681.1 KEGG: spe:Spro_0934 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004114682.1 KEGG: kpe:KPK_2607 amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004114683.1 PFAM: aminotransferase class V; KEGG: kpn:KPN_01762 serine-pyruvate aminotransferase/aspartate aminotransferase YP_004114684.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: eta:ETA_26160 allantoate amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004114685.1 KEGG: eta:ETA_26150 hypothetical protein; TIGRFAM: OHCU decarboxylase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase YP_004114686.1 KEGG: eta:ETA_26140 transthyretin family protein; TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin YP_004114687.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: eta:ETA_26120 hypothetical protein YP_004114688.1 PFAM: aminotransferase class I and II; KEGG: ent:Ent638_1144 putative aminotransferase YP_004114689.1 KEGG: eta:ETA_26090 methylthioribulose-1-phosphate dehydratase; TIGRFAM: methylthioribulose-1-phosphate dehydratase; PFAM: class II aldolase/adducin family protein YP_004114690.1 TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; KEGG: eta:ETA_26080 enolase-phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004114691.1 KEGG: ent:Ent638_1141 acireductone dioxygenase, ARD; PFAM: Acireductone dioxygenase ARD YP_004114692.1 TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: eta:ETA_26060 putative translation initiation factor EIF-2B; PFAM: initiation factor 2B related YP_004114693.1 TIGRFAM: 5-methylthioribose kinase; KEGG: ent:Ent638_1139 methylthioribose kinase; PFAM: aminoglycoside phosphotransferase YP_004114694.1 PFAM: Protein of unknown function DUF1974; acyl-CoA dehydrogenase domain protein; KEGG: eta:ETA_26040 acyl-CoA dehydrogenase YP_004114695.1 KEGG: eta:ETA_26030 phosphoheptose isomerase (sedoheptulose 7-phosphate isomerase); TIGRFAM: phosphoheptose isomerase; PFAM: sugar isomerase (SIS) YP_004114696.1 PFAM: glutamine amidotransferase class-II; KEGG: eta:ETA_26020 predicted glutamine amidotransferase YP_004114697.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: eta:ETA_26010 hypothetical protein YP_004114698.1 KEGG: eta:ETA_26000 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein YP_004114699.1 KEGG: hypothetical protein YP_004114700.1 KEGG: eta:ETA_34260 putative sugar ABC transporter YP_004114701.1 PFAM: inner-membrane translocator; KEGG: eta:ETA_34270 ribose transport system, permease protein YP_004114702.1 KEGG: kpn:KPN_00622 putative ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_004114703.1 TIGRFAM: aminoacyl-histidine dipeptidase; KEGG: ecg:E2348C_0230 aminoacyl-histidine dipeptidase (peptidase D); PFAM: peptidase dimerisation domain protein; peptidase M20 YP_004114704.1 KEGG: eta:ETA_25980 xanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004114705.1 PFAM: protein of unknown function DUF1100 hydrolase family protein; KEGG: eta:ETA_25970 fermentation/respiration switch protein YP_004114706.1 PFAM: transcriptional regulator Crl; KEGG: eta:ETA_25960 DNA-binding transcriptional regulator Crl YP_004114707.1 PFAM: porin Gram-negative type; KEGG: esa:ESA_03112 hypothetical protein YP_004114708.1 TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: eta:ETA_25940 gamma-glutamyl kinase; SMART: PUA domain containing protein YP_004114709.1 KEGG: eta:ETA_25930 gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase YP_004114710.1 PFAM: protein of unknown function DUF1471; KEGG: kpu:KP1_3089 hypothetical protein YP_004114711.1 KEGG: kpe:KPK_1527 hypothetical protein YP_004114712.1 KEGG: spe:Spro_3144 hypothetical protein YP_004114713.1 KEGG: spe:Spro_3143 hypothetical protein YP_004114715.1 KEGG: ent:Ent638_3379 response regulator receiver/unknown domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004114716.1 KEGG: ent:Ent638_3378 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein YP_004114717.1 PFAM: Citrate carrier protein; KEGG: cko:CKO_03359 hypothetical protein YP_004114718.1 KEGG: ent:Ent638_3376 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004114719.1 SMART: Citrate lyase ligase domain protein; TIGRFAM: citrate lyase ligase; cytidyltransferase-related domain protein; KEGG: ent:Ent638_3375 citrate lyase ligase; PFAM: Citrate lyase ligase domain protein; GCN5-related N-acetyltransferase YP_004114720.1 KEGG: ent:Ent638_3374 citrate lyase subunit gamma; TIGRFAM: citrate lyase acyl carrier protein; PFAM: Citrate lyase acyl carrier protein CitD YP_004114721.1 TIGRFAM: citrate lyase, beta subunit; KEGG: ctu:Ctu_35640 citrate lyase subunit beta; PFAM: HpcH/HpaI aldolase YP_004114722.1 TIGRFAM: citrate lyase, alpha subunit; KEGG: ent:Ent638_3372 citrate lyase, alpha subunit; PFAM: Citrate lyase alpha subunit YP_004114723.1 TIGRFAM: holo-ACP synthase CitX; KEGG: ent:Ent638_3371 holo-ACP synthase; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase YP_004114724.1 TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG; KEGG: ctu:Ctu_35610 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-As ynthase; PFAM: triphosphoribosyl-dephospho-CoA protein YP_004114725.1 KEGG: sal:Sala_0076 hypothetical protein YP_004114726.1 PFAM: glycosyl transferase family 2; KEGG: bvu:BVU_3966 glycosyl transferase family protein YP_004114727.1 PFAM: polysaccharide biosynthesis protein; KEGG: spe:Spro_1343 polysaccharide biosynthesis protein YP_004114728.1 PFAM: glycosyl transferase family 2; KEGG: bth:BT_0044 putative glycosyltransferase YP_004114730.1 TIGRFAM: serine transporter; KEGG: esa:ESA_00509 hypothetical protein YP_004114731.1 KEGG: mms:mma_3584 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004114732.1 KEGG: esa:ESA_02190 hypothetical protein; PFAM: CheW domain protein; response regulator receiver; SMART: response regulator receiver; CheW domain protein YP_004114733.1 KEGG: eta:ETA_16560 ATP-dependent RNA helicase DbpA; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004114734.1 KEGG: amf:AMF_420 dihydroneopterin aldolase (FolB) YP_004114735.1 PFAM: Amidohydrolase 3; KEGG: spe:Spro_0096 deaminase YP_004114736.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_0105 LysR family transcriptional regulator YP_004114737.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0106 putative cyanate transporter YP_004114738.1 KEGG: cro:ROD_42171 L-lactate permease; TIGRFAM: L-lactate transport; PFAM: L-lactate permease YP_004114739.1 KEGG: kpe:KPK_0147 DNA-binding transcriptional repressor LldR; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004114740.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: ctu:Ctu_01630 L-lactate dehydrogenase YP_004114741.1 TIGRFAM: peroxiredoxin, OsmC subfamily; KEGG: eca:ECA2221 osmotically inducible protein C; PFAM: OsmC family protein YP_004114743.1 KEGG: gbm:Gbem_1688 hypothetical protein YP_004114744.1 KEGG: eta:ETA_25840 hypothetical protein YP_004114745.1 KEGG: eta:ETA_25790 hypothetical protein YP_004114746.1 PFAM: Abortive infection protein; KEGG: eta:ETA_25720 transfer inhibition protein Tir YP_004114747.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; CHASE4 domain protein; PAS fold domain protein; KEGG: ypi:YpsIP31758_0666 sensory box-containing diguanylate cyclase; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_004114748.1 KEGG: eta:ETA_25710 hypothetical protein YP_004114749.1 KEGG: eta:ETA_25700 hypothetical protein YP_004114750.1 PFAM: major facilitator superfamily MFS_1; KEGG: cro:ROD_04251 putative efflux pump YP_004114751.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; KEGG: spe:Spro_3173 beta-D-galactosidase YP_004114752.1 KEGG: pct:PC1_0085 hypothetical protein YP_004114753.1 PFAM: Sigma-S stabilisation anti-adaptor protein; KEGG: esa:ESA_02923 hypothetical protein YP_004114754.1 PFAM: PsiF repeat protein; KEGG: eta:ETA_25670 phosphate starvation-inducible protein YP_004114755.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; KEGG: ppu:PP_3175 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004114756.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: eta:ETA_25660 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_004114757.1 PFAM: protein of unknown function DUF188; KEGG: dze:Dd1591_3291 protein of unknown function DUF188 YP_004114758.1 PFAM: Protein of unknown function DUF2076; KEGG: eta:ETA_25640 hypothetical protein YP_004114759.1 KEGG: eta:ETA_25630 shikimate kinase 2 (SK 2); PFAM: shikimate kinase YP_004114760.1 KEGG: sbc:SbBS512_E0306 hypothetical protein YP_004114761.1 KEGG: eta:ETA_25610 transcriptional regulatory protein, IclR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004114762.1 KEGG: spe:Spro_1023 oligopeptide transporter OPT superfamily protein; manually curated; PFAM: Oligopeptide transporter OPT superfamily protein YP_004114763.1 PFAM: protein of unknown function DUF1177; KEGG: spe:Spro_1024 hypothetical protein YP_004114764.1 PFAM: AroM family protein; KEGG: spe:Spro_1025 hypothetical protein YP_004114765.1 PFAM: protein of unknown function DUF1255; KEGG: eta:ETA_25560 hypothetical protein YP_004114766.1 KEGG: hypothetical protein YP_004114767.1 KEGG: yen:YE0485 hypothetical protein YP_004114768.1 KEGG: yen:YE0486 hypothetical protein YP_004114769.1 PFAM: putative exonuclease RdgC; KEGG: eta:ETA_25550 recombination associated protein YP_004114770.1 PFAM: ROK family protein; KEGG: ecv:APECO1_1615 fructokinase YP_004114771.1 KEGG: eta:ETA_25540 putative ethanolamin permease; TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region YP_004114772.1 PFAM: aminoglycoside phosphotransferase; KEGG: pct:PC1_0069 aminoglycoside phosphotransferase YP_004114773.1 KEGG: eta:ETA_25520 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004114774.1 KEGG: cro:ROD_07331 colicin import protein YP_004114775.1 PFAM: Curli production assembly/transport component CsgG; KEGG: spe:Spro_1390 curli production assembly/transport component CsgG YP_004114776.1 KEGG: yen:YE1235 putative lipoprotein YP_004114777.1 PFAM: protein of unknown function DUF799; KEGG: dda:Dd703_4014 protein of unknown function DUF799 YP_004114778.1 KEGG: ypp:YPDSF_2840 hypothetical protein; TIGRFAM: exonuclease SbcC; PFAM: SMC domain protein YP_004114779.1 KEGG: eta:ETA_25490 exonuclease subunit D; TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase YP_004114780.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: eta:ETA_25480 response regulator in two-component regulatory system with PhoR; SMART: response regulator receiver YP_004114781.1 TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: eta:ETA_25470 phosphate regulon sensor protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_004114782.1 TIGRFAM: phosphate binding protein; KEGG: eta:ETA_25460 putative phosphate binding protein YP_004114783.1 PFAM: Methionine synthase vitamin-B12 independent; KEGG: eta:ETA_25450 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase YP_004114784.1 KEGG: eta:ETA_25440 branched-chain amino acid transport system II carrier protein; TIGRFAM: branched-chain amino acid transport system II carrier protein; PFAM: branched-chain amino acid transport system II carrier protein YP_004114785.1 PFAM: amino acid permease-associated region; KEGG: ddc:Dd586_0995 amino acid permease-associated region YP_004114786.1 PFAM: acyltransferase 3; KEGG: hne:HNE_2463 acyltransferase family protein YP_004114787.1 PFAM: histidine acid phosphatase; KEGG: kpn:KPN_00628 putative 3-phytase precursor YP_004114788.1 PFAM: inositol monophosphatase; KEGG: kpu:KP1_1580 inositol monophosphatase family protein YP_004114789.1 KEGG: eta:ETA_25410 acyl carrier protein phosphodiesterase; PFAM: protein of unknown function DUF479 YP_004114790.1 KEGG: ddc:Dd586_1002 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein YP_004114791.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: stm:STM0405 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_004114792.1 KEGG: cro:ROD_04551 putative preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein YP_004114793.1 KEGG: eta:ETA_25370 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_004114794.1 KEGG: eta:ETA_25360 preprotein translocase subunit SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_004114795.1 KEGG: dze:Dd1591_3093 hypothetical protein YP_004114796.1 PFAM: ATP-cone domain protein; KEGG: ctu:Ctu_09900 transcriptional repressor NrdR YP_004114797.1 TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: eta:ETA_25320 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_004114798.1 KEGG: eta:ETA_25310 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase); TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_004114799.1 KEGG: eta:ETA_25300 transcription antitermination protein NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44 YP_004114800.1 TIGRFAM: thiamine-monophosphate kinase; KEGG: eta:ETA_25290 thiamine monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_004114801.1 KEGG: cko:CKO_02743 phosphatidylglycerophosphatase A; PFAM: phosphatidylglycerophosphatase A YP_004114802.1 PFAM: aldo/keto reductase; KEGG: elf:LF82_2539 uncharacterized oxidoreductase YajO YP_004114803.1 KEGG: eta:ETA_25270 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein YP_004114804.1 PFAM: Polyprenyl synthetase; KEGG: eta:ETA_25260 geranyltranstransferase YP_004114805.1 KEGG: ecy:ECSE_0444 exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit YP_004114806.1 KEGG: eta:ETA_25240 thiamine biosynthesis protein ThiI; TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: Thiamine biosynthesis protein-like; THUMP domain protein YP_004114807.1 KEGG: esa:ESA_02878 hypothetical protein; TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein YP_004114808.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: eta:ETA_25220 2-dehydropantoate 2-reductase (KPA reductase); PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_004114809.1 PFAM: protein of unknown function DUF520; KEGG: eta:ETA_25210 hypothetical protein YP_004114810.1 KEGG: yps:YPTB2196 putative transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004114811.1 PFAM: Aldehyde Dehydrogenase; KEGG: ypb:YPTS_2271 aldehyde dehydrogenase YP_004114812.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: esa:ESA_01682 hypothetical protein YP_004114813.1 PFAM: major facilitator superfamily MFS_1; KEGG: eta:ETA_25200 putative transporter YP_004114814.1 KEGG: eta:ETA_25190 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_004114815.1 KEGG: eta:ETA_25180 cytochrome o ubiquinol oxidase protein CyoD (ubiquinol oxidase chain D); TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV YP_004114816.1 KEGG: eta:ETA_25170 cytochrome o ubiquinol oxidase subunit III; TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III YP_004114817.1 TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; KEGG: eta:ETA_25160 cytochrome o ubiquinol oxidase subunit I; PFAM: cytochrome c oxidase subunit I YP_004114818.1 KEGG: eta:ETA_25150 cytochrome o ubiquinol oxidase subunit II; TIGRFAM: ubiquinol oxidase, subunit II; PFAM: COX aromatic rich domain protein; cytochrome c oxidase subunit II YP_004114819.1 KEGG: eta:ETA_25140 muropeptide transporter; TIGRFAM: AmpG-related permease; PFAM: major facilitator superfamily MFS_1 YP_004114820.1 PFAM: Uncharacterized lipoprotein; KEGG: eta:ETA_25130 hypothetical protein YP_004114821.1 PFAM: BolA family protein; KEGG: spe:Spro_1093 transcriptional regulator BolA YP_004114822.1 KEGG: eta:ETA_25110 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain; peptidylprolyl isomerase FKBP-type; trigger factor domain protein YP_004114823.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: cko:CKO_02723 hypothetical protein; PFAM: peptidase S14 ClpP YP_004114824.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; Clp ATPase-like; KEGG: efe:EFER_2579 ATP-dependent protease ATP-binding subunit ClpX; SMART: AAA ATPase YP_004114825.1 SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: eta:ETA_25050 DNA-binding ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein YP_004114826.1 KEGG: dze:Dd1591_3065 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004114827.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: eta:ETA_25030 peptidyl-prolyl cis-trans isomerase (rotamase D) YP_004114828.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: ddc:Dd586_1037 competence protein ComEA helix-hairpin-helix repeat protein YP_004114829.1 PFAM: thioesterase superfamily protein; KEGG: kpe:KPK_4277 thioesterase family protein YP_004114830.1 KEGG: esa:ESA_02853 queuosine biosynthesis protein QueC; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like YP_004114831.1 KEGG: esa:ESA_02852 hypothetical protein; manually curated; PFAM: extracellular solute-binding protein family 5 YP_004114832.1 KEGG: efe:EFER_2571 thiamin pyrimidine pyrophosphate hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004114833.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: kpe:KPK_4273 pyridoxal-phosphate dependent enzyme YP_004114834.1 KEGG: eta:ETA_24980 AsnC-family regulatory protein; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type YP_004114835.1 KEGG: eta:ETA_24970 putative multidrug transporter membrane\ATP-binding components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004114836.1 KEGG: cro:ROD_05041 putative ABC transporter, ATP-binding/permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004114837.1 PFAM: nitrogen regulatory protein P-II; KEGG: dze:Dd1591_3057 nitrogen regulatory protein P-II YP_004114838.1 KEGG: eta:ETA_24930 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_004114839.1 KEGG: eta:ETA_24920 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase YP_004114840.1 KEGG: eta:ETA_24910 probable glycoprotein involved in polysaccharide metabolism YP_004114841.1 KEGG: sdy:SDY_0391 hypothetical protein; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding YP_004114842.1 PFAM: Haemolysin expression modulating family protein; KEGG: eta:ETA_24890 hemolysin expression-modulating protein YP_004114843.1 PFAM: Biofilm formation regulator YbaJ; KEGG: eta:ETA_24880 hypothetical protein YP_004114844.1 KEGG: eta:ETA_24870 hypothetical protein YP_004114845.1 KEGG: eta:ETA_24860 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004114846.1 PFAM: ABC-3 protein; KEGG: eta:ETA_24850 ABC transporter membrane protein YP_004114847.1 PFAM: periplasmic solute binding protein; KEGG: spe:Spro_1123 periplasmic solute binding protein YP_004114848.1 KEGG: spe:Spro_1124 ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36 YP_004114849.1 KEGG: eta:ETA_24820 50S ribosomal protein L31 type B; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_004114850.1 KEGG: eta:ETA_24810 acriflavine resistance protein B; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004114851.1 KEGG: eta:ETA_24800 acriflavine resistance protein A precursor; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004114852.1 PFAM: Tetracycline transcriptional repressor MAATS-type domain protein; regulatory protein TetR; KEGG: eta:ETA_24790 DNA-binding transcriptional repressor AcrR YP_004114853.1 PFAM: Protein of unknown function DUF2496, YbaM-related; KEGG: cro:ROD_05241 hypothetical protein YP_004114854.1 KEGG: spe:Spro_3521 hypothetical protein YP_004114855.1 PFAM: Primosomal replication priB and priC; KEGG: eta:ETA_24770 primosomal replication protein N'' YP_004114856.1 PFAM: protein of unknown function DUF454; KEGG: esa:ESA_02802 hypothetical protein YP_004114857.1 KEGG: eta:ETA_24750 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004114858.1 TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; KEGG: eta:ETA_24740 DNA polymerase III subunit tau; SMART: AAA ATPase YP_004114859.1 PFAM: conserved hypothetical protein; KEGG: eci:UTI89_C0499 hypothetical protein YP_004114860.1 TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; KEGG: spe:Spro_1137 recombination protein RecR; SMART: Toprim sub domain protein YP_004114861.1 KEGG: eta:ETA_24710 heat shock protein 90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004114862.1 KEGG: sbn:Sbal195_3798 NACHT family-like NTPase YP_004114863.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_24700 LysR-family transcriptional regulator YP_004114864.1 KEGG: eta:ETA_24670 hypothetical protein YP_004114865.1 KEGG: spe:Spro_1139 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein YP_004114866.1 TIGRFAM: ferrochelatase; KEGG: eta:ETA_24640 ferrochelatase (protoheme ferro-lyase; heme synthetase); PFAM: ferrochelatase YP_004114867.1 KEGG: eta:ETA_24630 inosine-guanosine kinase; PFAM: PfkB domain protein YP_004114868.1 KEGG: eta:ETA_24620 putative cation:proton antiport protein; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein YP_004114869.1 PFAM: major facilitator superfamily MFS_1; KEGG: stm:STM0493 putative transport protein YP_004114870.1 PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: eta:ETA_24600 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor YP_004114871.1 PFAM: transmembrane pair domain protein; KEGG: eta:ETA_24590 hypothetical protein YP_004114872.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_24580 LysR-family transcriptional regulator YP_004114873.1 KEGG: kpu:KP1_1341 hypothetical protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region YP_004114874.1 PFAM: GumN family protein; KEGG: kpe:KPK_4217 GumN family protein YP_004114875.1 KEGG: eta:ETA_24550 copper exporting ATPase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_004114876.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: dze:Dd1591_3026 transcriptional regulator, MerR family; SMART: regulatory protein MerR YP_004114877.1 PFAM: protein of unknown function DUF107; KEGG: eta:ETA_24530 hypothetical protein YP_004114878.1 KEGG: dze:Dd1591_3024 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein YP_004114879.1 PFAM: Thioredoxin domain; KEGG: eta:ETA_24510 putative thioredoxin-like protein YP_004114880.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eta:ETA_24500 short chain dehydrogenase YP_004114881.1 manually curated; KEGG: ecw:EcE24377A_0533 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; PFAM: lipolytic protein G-D-S-L family YP_004114882.1 KEGG: spe:Spro_1158 putative ABC transporter ATP-binding protein YbbA; PFAM: ABC transporter related; SMART: AAA ATPase YP_004114883.1 PFAM: protein of unknown function DUF214; KEGG: eta:ETA_24440 hypothetical protein YP_004114884.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: eoj:ECO26_0555 N5-carboxyaminoimidazole ribonucleotide synthase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_004114885.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: eta:ETA_24420 phosphoribosylaminoimidazole carboxylase catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_004114886.1 KEGG: eta:ETA_24410 UDP-2,3-diacylglucosamine hydrolase; TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase YP_004114887.1 KEGG: eta:ETA_24400 peptidyl-prolyl cis-trans isomerase B (rotamase B); PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type YP_004114888.1 TIGRFAM: cysteinyl-tRNA synthetase; KEGG: eta:ETA_24380 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR YP_004114889.1 KEGG: sdy:SDY_0280 hypothetical protein YP_004114890.1 KEGG: spe:Spro_1168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_004114891.1 PFAM: protein of unknown function DUF1198; KEGG: stm:STM3786 putative inner membrane protein YP_004114892.1 PFAM: integrase family protein; KEGG: eta:ETA_24330 prophage integrase YP_004114893.1 manually curated; KEGG: hba:Hbal_0673 response regulator receiver protein YP_004114894.1 KEGG: hba:Hbal_0674 hypothetical protein YP_004114895.1 PFAM: UvrD/REP helicase; protein of unknown function DUF955; KEGG: hba:Hbal_0675 UvrD/REP helicase YP_004114896.1 KEGG: hba:Hbal_0676 hypothetical protein YP_004114897.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: spq:SPAB_01124 hypothetical protein YP_004114898.1 KEGG: rme:Rmet_3360 hypothetical protein YP_004114901.1 PFAM: protein of unknown function DUF1044; KEGG: dze:Dd1591_3695 protein of unknown function DUF1044 YP_004114902.1 KEGG: sea:SeAg_B4004 DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004114904.1 KEGG: bpd:BURPS668_A1355 hypothetical protein YP_004114905.1 PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_0027 major facilitator superfamily MFS_1 YP_004114906.1 KEGG: ppw:PputW619_2161 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004114907.1 PFAM: Amidohydrolase 3; KEGG: ppw:PputW619_2162 amidohydrolase 3 YP_004114908.1 KEGG: pmy:Pmen_3835 ABC transporter related; PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase YP_004114909.1 PFAM: inner-membrane translocator; KEGG: pmy:Pmen_3836 inner-membrane translocator YP_004114910.1 PFAM: Extracellular ligand-binding receptor; KEGG: ppw:PputW619_2165 extracellular ligand-binding receptor YP_004114911.1 KEGG: ppw:PputW619_2166 hypothetical protein YP_004114912.1 TIGRFAM: ketose-bisphosphate aldolase; KEGG: ecz:ECS88_4074 hypothetical protein; PFAM: ketose-bisphosphate aldolase class-II YP_004114913.1 KEGG: lin:lin0377 hypothetical protein; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit; phosphotransferase system EIIC YP_004114914.1 KEGG: kpu:KP1_2790 fructose-mannitol-specific PTS family enzyme IIA component; TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_004114915.1 KEGG: ecm:EcSMS35_3997 putative PTS regulatory protein; PFAM: PRD domain protein; Helix-turn-helix type 11 domain protein; phosphotransferase system lactose/cellobiose-specific IIB subunit YP_004114916.1 KEGG: kpu:KP1_1737 hypothetical protein YP_004114917.1 KEGG: kpn:KPN_00559 Mg2+ transport ATPase, P-type 1; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_004114918.1 PFAM: protein of unknown function UPF0118; KEGG: eca:ECA0120 hypothetical protein YP_004114919.1 PFAM: protein of unknown function DUF1272; KEGG: cro:ROD_16881 hypothetical protein YP_004114920.1 KEGG: dda:Dd703_0132 hypothetical protein YP_004114921.1 KEGG: esa:ESA_02495 hypothetical protein; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004114922.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: spe:Spro_0611 iron-containing alcohol dehydrogenase YP_004114923.1 KEGG: ses:SARI_04102 hypothetical protein; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter YP_004114924.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: spe:Spro_2010 hypothetical protein YP_004114925.1 KEGG: eta:ETA_23700 hypothetical protein YP_004114927.1 PFAM: Antimicrobial peptide resistance and lipid A acylation PagP; KEGG: eta:ETA_23630 palmitoyl transferase YP_004114928.1 KEGG: kpu:KP1_1611 cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004114930.1 PFAM: GCN5-related N-acetyltransferase; KEGG: esa:ESA_01926 hypothetical protein YP_004114931.1 KEGG: dda:Dd703_0385 transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004114932.1 KEGG: dda:Dd703_0386 hypothetical protein YP_004114933.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: dda:Dd703_0387 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004114934.1 KEGG: dda:Dd703_0388 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004114935.1 KEGG: dda:Dd703_0389 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004114936.1 KEGG: dda:Dd703_0390 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004114937.1 KEGG: kpu:KP1_1614 twin argininte translocase protein A; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_004114938.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: spe:Spro_1195 lipoyl synthase; PFAM: Radical SAM domain protein YP_004114939.1 TIGRFAM: lipoate-protein ligase B; KEGG: ddc:Dd586_1132 lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase YP_004114940.1 PFAM: protein of unknown function DUF493; KEGG: sgl:SG0794 hypothetical protein YP_004114941.1 KEGG: eta:ETA_23560 D-alanyl-D-alanine carboxypeptidase fraction A; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_004114942.1 KEGG: eta:ETA_23550 rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein YP_004114943.1 KEGG: ctu:Ctu_12670 rod shape-determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein YP_004114944.1 TIGRFAM: penicillin-binding protein 2; KEGG: eta:ETA_23530 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_004114945.1 PFAM: protein of unknown function DUF163; KEGG: eta:ETA_23520 conserved hypothetical protein (DUF163) YP_004114946.1 KEGG: kpu:KP1_1624 hypothetical protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein YP_004114947.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: etr:ETAE_2641 nicotinic acid mononucleotide adenyltransferase; PFAM: cytidylyltransferase YP_004114948.1 TIGRFAM: DNA polymerase III, delta subunit; KEGG: eta:ETA_23490 DNA polymerase III subunit delta; PFAM: DNA polymerase III delta YP_004114949.1 PFAM: Rare lipoprotein B; KEGG: eta:ETA_23480 rare lipoprotein B YP_004114950.1 KEGG: eta:ETA_23470 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase YP_004114951.1 PFAM: protein of unknown function DUF1451; KEGG: cro:ROD_06631 hypothetical protein YP_004114952.1 KEGG: ddc:Dd586_1145 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004114953.1 KEGG: pct:PC1_1190 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004114954.1 KEGG: spe:Spro_1213 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004114955.1 KEGG: eta:ETA_23420 glutamate and aspartate transporter subunit; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004114956.1 KEGG: eta:ETA_23410 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004114957.1 PFAM: transporter-associated region; CBS domain containing protein; KEGG: eta:ETA_23400 magnesium and cobalt efflux protein CorC YP_004114958.1 PFAM: protein of unknown function UPF0054; KEGG: eta:ETA_23390 conserved hypothetical protein (UPF0054) YP_004114959.1 PFAM: PhoH family protein; KEGG: ctu:Ctu_12840 PhoH-like protein YP_004114960.1 TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: cko:CKO_02502 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB YP_004114961.1 KEGG: eta:ETA_23360 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: FAD dependent oxidoreductase YP_004114962.1 KEGG: eta:ETA_23350 asparagine synthetase B; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II YP_004114963.1 KEGG: esa:ESA_02664 UMP phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004114964.1 PFAM: ROK family protein; regulatory protein MarR; KEGG: eta:ETA_23330 N-acetylglucosamine repressor YP_004114965.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: eta:ETA_23320 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_004114966.1 KEGG: eta:ETA_23310 glucosamine-6-phosphate deaminase; TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase YP_004114967.1 TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PTS system, glucose subfamily, IIA subunit; KEGG: yen:YE2978 PTS system, N-acetylglucosamine-specific IIABC component; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; sugar-specific permease EIIA 1 domain YP_004114968.1 KEGG: eta:ETA_23290 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain YP_004114969.1 KEGG: eta:ETA_23280 hypothetical protein YP_004114970.1 PFAM: ferric-uptake regulator; KEGG: eta:ETA_23260 ferric uptake regulator YP_004114971.1 KEGG: eta:ETA_23250 flavodoxin 1; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase YP_004114972.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: yen:YE2970 LexA regulated protein YP_004114973.1 PFAM: alpha/beta hydrolase fold; KEGG: eta:ETA_23230 putative hydrolase YP_004114974.1 PFAM: SeqA family protein; KEGG: spe:Spro_1240 replication initiation regulator SeqA YP_004114975.1 KEGG: eta:ETA_23210 phosphoglucomutase; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_004114976.1 KEGG: ctu:Ctu_13100 KDP operon transcriptional regulatory protein KdpE; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_004114977.1 PFAM: Protein of unknown function DUF2517; KEGG: pwa:Pecwa_3114 protein of unknown function DUF2517 YP_004114978.1 PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: eta:ETA_23190 putative pathogenicity island protein YP_004114979.1 KEGG: eta:ETA_23180 deoxyribodipyrimidine photolyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein YP_004114980.1 PFAM: protein of unknown function DUF34; KEGG: eta:ETA_23170 conserved hypothetical protein YbgI YP_004114981.1 KEGG: ecm:EcSMS35_0726 allophanate hydrolase, subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1 YP_004114982.1 TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: eta:ETA_23150 predicted allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2 YP_004114983.1 PFAM: LamB/YcsF family protein; KEGG: cro:ROD_07131 LamB/YcsF-family protein YP_004114984.1 PFAM: protein of unknown function DUF969; KEGG: spe:Spro_1258 hypothetical protein YP_004114985.1 PFAM: protein of unknown function DUF979; KEGG: eta:ETA_23120 predicted membrane protein YP_004114986.1 TIGRFAM: pyrrolidone-carboxylate peptidase; KEGG: eta:ETA_23110 pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I YP_004114987.1 PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; KEGG: ebr:ECB_00674 endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase YP_004114988.1 KEGG: eta:ETA_23090 type II citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase YP_004114989.1 KEGG: eta:ETA_23080 succinate dehydrogenase cytochrome b-556 subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit YP_004114990.1 TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: eta:ETA_23070 succinate dehydrogenase cytochrome b556 small membrane subunit YP_004114991.1 KEGG: esa:ESA_02624 succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004114992.1 KEGG: eta:ETA_23050 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004114993.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: eta:ETA_23040 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase central region; dehydrogenase E1 component YP_004114994.1 KEGG: eta:ETA_23030 dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_004114995.1 TIGRFAM: succinyl-CoA synthetase, beta subunit; KEGG: eta:ETA_23020 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_004114996.1 KEGG: eta:ETA_23010 succinyl-CoA synthetase, alpha subunit; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein YP_004114997.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: efe:EFER_2371 cytochrome d terminal oxidase, subunit I YP_004114998.1 KEGG: cko:CKO_02409 hypothetical protein; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_004114999.1 KEGG: pay:PAU_02965 hypothetical protein; TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein YP_004115000.1 KEGG: etr:ETAE_2578 cyd operon protein; TIGRFAM: cyd operon protein YbgE; PFAM: Cyd operon protein YbgE YP_004115001.1 KEGG: eta:ETA_22970 acyl-CoA thioester hydrolase YbgC; TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein YP_004115002.1 KEGG: kpu:KP1_1699 inner membrane protein; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel YP_004115003.1 KEGG: esa:ESA_02608 colicin uptake protein TolR; TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR YP_004115004.1 KEGG: eta:ETA_22940 cell envelope integrity inner membrane protein TolA; TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA YP_004115005.1 KEGG: esa:ESA_02605 translocation protein TolB; TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; WD40 domain protein beta Propeller YP_004115006.1 KEGG: eta:ETA_22920 peptidoglycan-associated outer membrane lipoprotein; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein YP_004115007.1 KEGG: eta:ETA_22910 tol-pal system protein YbgF; TIGRFAM: tol-pal system protein YbgF; PFAM: Tetratricopeptide TPR_2 repeat protein YP_004115008.1 PFAM: glycosyl transferase family 2; Rhamnan synthesis F; KEGG: ter:Tery_2268 glycosyl transferase family protein YP_004115009.1 KEGG: eta:ETA_22900 putative DNA-3-methyladenine glycosidase II; PFAM: AlkA domain protein; Ada metal-binding domain protein; helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; SMART: Helix-turn-helix, AraC domain; HhH-GPD family protein YP_004115010.1 KEGG: pfl:PFL_5108 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein YP_004115011.1 TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: esa:ESA_02596 quinolinate synthetase; PFAM: Quinolinate synthetase A YP_004115012.1 KEGG: cro:ROD_07391 nicotinamide mononucleotide transport protein; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC YP_004115013.1 KEGG: efe:EFER_2358 zinc transporter ZitB; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_004115014.1 KEGG: spe:Spro_1285 Hpt sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3; response regulator receiver YP_004115015.1 KEGG: spe:Spro_1286 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_004115016.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: kpe:KPK_3266 transcriptional regulator, RpiR family YP_004115017.1 PFAM: aminotransferase class-III; KEGG: kpe:KPK_3265 hypothetical protein YP_004115018.1 KEGG: kpn:KPN_pKPN5p08190 hypothetical protein YP_004115019.1 KEGG: kpn:KPN_pKPN5p08191 hypothetical protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004115020.1 KEGG: kpn:KPN_pKPN5p08192 glutamine ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004115021.1 KEGG: kpe:KPK_3261 glutamine ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115022.1 PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: kpe:KPK_3259 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase YP_004115023.1 KEGG: ent:Ent638_1244 hypothetical protein YP_004115024.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ses:SARI_02176 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004115025.1 TIGRFAM: phosphoglycerate mutase 1 family; KEGG: eta:ETA_22810 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; PFAM: Phosphoglycerate mutase YP_004115026.1 TIGRFAM: galactose mutarotase; KEGG: eta:ETA_22800 galactose 1-epimerase (mutarotase); PFAM: Aldose 1-epimerase YP_004115027.1 KEGG: kpe:KPK_3808 galactokinase; TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein YP_004115028.1 TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: eum:ECUMN_0842 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_004115029.1 KEGG: cko:CKO_02375 putative molybdenum transport ATP-binding protein ModF; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115030.1 KEGG: spe:Spro_1296 DNA-binding transcriptional regulator ModE; TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein LysR; TOBE domain protein YP_004115031.1 PFAM: Protein of unknown function DUF2592; KEGG: eta:ETA_22750 putative outer membrane or exported YP_004115032.1 KEGG: eta:ETA_22740 molybdate transporter periplasmic protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004115033.1 KEGG: eta:ETA_22730 molybdenum transport system permease protein; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004115034.1 TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; KEGG: eta:ETA_22720 molybdate transporter ATP-binding protein; SMART: AAA ATPase YP_004115035.1 KEGG: eta:ETA_22710 phosphotransferase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004115036.1 KEGG: eta:ETA_22700 6-phosphogluconolactonase; PFAM: Domain of unknown function DUF2394 YP_004115037.1 PFAM: putative transposase YhgA family protein; KEGG: pay:PAU_00292 hypothetical protein YP_004115038.1 KEGG: dze:Dd1591_2540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III YP_004115039.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: ddc:Dd586_2484 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein YP_004115040.1 TIGRFAM: 8-amino-7-oxononanoate synthase; KEGG: spe:Spro_1312 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_004115041.1 KEGG: etw:ECSP_0873 predicted methltransferase, enzyme of biotin synthesis; TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11 YP_004115042.1 KEGG: kpu:KP1_1753 dithiobiotin synthetase; TIGRFAM: dethiobiotin synthase; PFAM: Cobyrinic acid ac-diamide synthase YP_004115043.1 KEGG: eta:ETA_22620 putative amino acid transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115044.1 TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: cko:CKO_02348 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein YP_004115045.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: ent:Ent638_1272 protein of unknown function UPF0052 and CofD YP_004115046.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; KEGG: eta:ETA_22590 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_004115047.1 KEGG: eta:ETA_22580 molybdopterin biosynthesis; TIGRFAM: molybdenum cofactor biosynthesis protein B; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain YP_004115048.1 manually curated; TIGRFAM: molybdenum cofactor biosynthesis protein C; KEGG: eta:ETA_22570 molybdopterin cofactor biosynthesis protein; PFAM: molybdopterin cofactor biosynthesis MoaC region YP_004115049.1 KEGG: sea:SeAg_B0840 molybdopterin synthase small subunit; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein YP_004115050.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: dda:Dd703_2431 molybdopterin biosynthesis MoaE protein YP_004115051.1 PFAM: protein of unknown function DUF1615; KEGG: eta:ETA_22540 putative lipoprotein YP_004115052.1 PFAM: protein of unknown function UPF0005; KEGG: eta:ETA_22530 hypothetical protein YP_004115053.1 KEGG: ent:Ent638_1279 hypothetical protein YP_004115054.1 KEGG: ent:Ent638_1280 cardiolipin synthase 2; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_004115055.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ctu:Ctu_13890 uncharacterized protein YbhP YP_004115056.1 KEGG: eta:ETA_22520 inner membrane protein YbhQ YP_004115057.1 KEGG: kpe:KPK_3740 ATP-dependent RNA helicase RhlE; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004115058.1 PFAM: dihydrouridine synthase DuS; KEGG: kpe:KPK_1587 tRNA-dihydrouridine synthase C YP_004115059.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpe:KPK_2730 transporter, major facilitator family YP_004115060.1 PFAM: protein of unknown function DUF344; KEGG: spe:Spro_2560 hypothetical protein YP_004115061.1 PFAM: phosphate transporter; KEGG: spe:Spro_2559 phosphate transporter YP_004115062.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: spe:Spro_2558 Mg2 transporter protein CorA family protein YP_004115063.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: eta:ETA_22490 conserved hypothetical protein YbiS YP_004115064.1 PFAM: glycoside hydrolase 15-related; KEGG: pst:PSPTO_2493 glycosyl hydrolase, family 15 YP_004115065.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ent:Ent638_2737 acetoin dehydrogenase YP_004115066.1 PFAM: SNARE associated Golgi protein; KEGG: eta:ETA_22480 conserved hypothetical protein YohD YP_004115067.1 PFAM: protein of unknown function DUF1282; KEGG: ent:Ent638_2735 hypothetical protein YP_004115068.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: esa:ESA_01104 D-alanyl-D-alanine endopeptidase YP_004115069.1 PFAM: MscS Mechanosensitive ion channel; KEGG: eta:ETA_22440 putative mechanosensitive ion channel protein YP_004115070.1 KEGG: eta:ETA_22430 D-lactate dehydrogenase; PFAM: D-lactate dehydrogenase membrane binding ; FAD linked oxidase domain protein YP_004115071.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: eta:ETA_22420 periplasmic beta-glucosidase YP_004115072.1 PFAM: Protein of unknown function DUF2236; KEGG: eta:ETA_22410 hypothetical protein YP_004115073.1 KEGG: bpy:Bphyt_6803 phosphoesterase PA-phosphatase related YP_004115074.1 KEGG: eta:ETA_22400 hypothetical protein YP_004115075.1 KEGG: yen:YE4183 putative methyl-accepting chemotaxis receptor protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004115076.1 TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; KEGG: eta:ETA_22390 isopentenyl-diphosphate delta-isomerase; PFAM: NUDIX hydrolase YP_004115077.1 PFAM: porin Gram-negative type; KEGG: eta:ETA_18600 outer membrane pore protein E YP_004115078.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: rle:RL0979 hypothetical protein YP_004115079.1 PFAM: peptidase M24; KEGG: ara:Arad_2175 methionine aminopeptidase protein YP_004115080.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL0981 putative transmembrane component of ABC transporter YP_004115081.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_2173 polyamine ABC transporter YP_004115082.1 PFAM: extracellular solute-binding protein family 1; KEGG: rle:RL0983 putative solute-binding component of ABC transporter YP_004115083.1 KEGG: rle:RL0984 putative ABC transporter component; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_004115084.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rle:RL0987 hypothetical protein YP_004115085.1 KEGG: rlg:Rleg_5379 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004115086.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1443 major facilitator transporter YP_004115087.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ssn:SSON_2188 putative transport system permease protein YP_004115088.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ctu:Ctu_27990 putative osmoprotectant uptake system permease protein YehY YP_004115089.1 KEGG: ypy:YPK_2863 ABC transporter related; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase YP_004115090.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1448 binding-protein-dependent transport systems inner membrane component YP_004115091.1 KEGG: eta:ETA_22370 hypothetical protein YP_004115092.1 KEGG: eta:ETA_22310 HTH-type transcriptional regulator MlrA (MerR-like regulator A); PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_004115093.1 KEGG: eta:ETA_22300 predicted transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004115094.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eta:ETA_22290 acetyltransferase YP_004115095.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ctu:Ctu_22580 hypothetical protein YP_004115096.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dda:Dd703_3519 transcriptional regulator, LysR family YP_004115097.1 KEGG: dda:Dd703_3518 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_004115098.1 KEGG: dda:Dd703_3517 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004115099.1 KEGG: dda:Dd703_3516 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115100.1 KEGG: dda:Dd703_3515 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004115101.1 PFAM: polysaccharide deacetylase; KEGG: dda:Dd703_3514 polysaccharide deacetylase YP_004115102.1 PFAM: polysaccharide deacetylase; KEGG: dda:Dd703_3513 polysaccharide deacetylase YP_004115103.1 PFAM: MmgE/PrpD family protein; KEGG: dda:Dd703_3512 MmgE/PrpD family protein YP_004115104.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: ddc:Dd586_2938 3-dehydroquinate synthase YP_004115105.1 KEGG: kpu:KP1_4232 putative arginase/agmatinase/formiminoglutamase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase YP_004115106.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pmy:Pmen_1799 LysR family transcriptional regulator YP_004115107.1 SMART: helicase c2; DEAD-like helicase ; Helicase-like, DEXD box c2 type; KEGG: eta:ETA_22280 ATP-dependent DNA helicase DinG YP_004115108.1 PFAM: Negative transcriptional regulator; KEGG: spe:Spro_1466 FMN-binding negative transcriptional regulator YP_004115109.1 PFAM: Glycosyl transferase, family 3-like; KEGG: eta:ETA_22270 glycosyl transferase family protein YP_004115110.1 TIGRFAM: amidohydrolase; KEGG: kpe:KPK_2239 amidohydrolase family protein; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004115111.1 PFAM: putative transposase YhgA family protein; KEGG: ypi:YpsIP31758_3726 putative transposase YP_004115112.1 TIGRFAM: urocanate hydratase; KEGG: eta:ETA_22250 urocanate hydratase; PFAM: Urocanase YP_004115113.1 TIGRFAM: histidine ammonia-lyase; KEGG: eta:ETA_22240 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase YP_004115114.1 TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: eta:ETA_22230 GntR-family transcriptional regulatory protein; SMART: regulatory protein GntR HTH YP_004115115.1 PFAM: protein of unknown function DUF886; KEGG: eta:ETA_22220 conserved hypothetical protein YdjR YP_004115116.1 KEGG: eta:ETA_22210 N-formimino-L-glutamate deiminase; TIGRFAM: formiminoglutamate deiminase; PFAM: amidohydrolase YP_004115117.1 TIGRFAM: imidazolonepropionase; KEGG: eta:ETA_22200 imidazolonepropionase; PFAM: amidohydrolase YP_004115118.1 KEGG: spe:Spro_2076 N-formylglutamate amidohydrolase; TIGRFAM: N-formylglutamate amidohydrolase; PFAM: N-formylglutamate amidohydrolase YP_004115119.1 KEGG: kpe:KPK_3146 amino acid ABC transporter, periplasmic amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004115120.1 KEGG: kpe:KPK_3145 amino acid ABC transporter, permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004115121.1 KEGG: kpe:KPK_3144 amino acid ABC transporter, permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004115122.1 KEGG: kpe:KPK_3143 amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115123.1 KEGG: kpe:KPK_3142 putative histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase YP_004115124.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: eta:ETA_22120 conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_004115125.1 KEGG: pwa:Pecwa_0854 rRNA (adenine-N(6)-)-methyltransferase; PFAM: protein of unknown function DUF890 YP_004115126.1 PFAM: MscS Mechanosensitive ion channel; KEGG: eta:ETA_22100 hypothetical protein YP_004115127.1 KEGG: eta:ETA_22090 glutamine ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115128.1 KEGG: eta:ETA_22080 glutamine ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004115129.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: cro:ROD_08121 glutamine ABC transporter, substrate-binding protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004115130.1 PFAM: Ferritin Dps family protein; KEGG: eta:ETA_22050 DNA starvation/stationary phase protection protein Dps YP_004115131.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ctu:Ctu_14140 inner membrane transporter RhtA YP_004115132.1 PFAM: virulence-related outer membrane protein; KEGG: eta:ETA_22030 outer membrane protein X YP_004115133.1 KEGG: bbe:BBR47_32810 hypothetical protein YP_004115134.1 KEGG: eta:ETA_22020 transcriptional regulator; PFAM: iron dependent repressor; SMART: iron dependent repressor YP_004115135.1 PFAM: Citrate transporter; KEGG: kpu:KP1_1805 putative transport protein YP_004115136.1 PFAM: secretion protein HlyD family protein; KEGG: eta:ETA_22010 putative multidrug resistance protein K YP_004115137.1 KEGG: eta:ETA_22000 drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004115138.1 KEGG: esa:ESA_02519 hypothetical protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004115139.1 KEGG: ctu:Ctu_09010 major myo-inositol transporter IolT; TIGRFAM: sugar transporter; PFAM: General substrate transporter YP_004115140.1 KEGG: eta:ETA_07650 DNA-binding protein H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_004115141.1 KEGG: efe:EFER_0963 putative transporter fused subunits of ABC superfamily: ATP-binding components; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115142.1 KEGG: esa:ESA_02510 molybdopterin biosynthesis protein MoeB; TIGRFAM: molybdopterin synthase sulfurylase MoeB; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein YP_004115143.1 KEGG: eta:ETA_21930 molybdopterin biosynthesis protein MoeA; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV YP_004115144.1 KEGG: kpn:KPN_02552 universal stress protein A YP_004115145.1 KEGG: dze:Dd1591_3976 peptidase T2 asparaginase 2; PFAM: peptidase T2 asparaginase 2 YP_004115146.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: eta:ETA_21910 putative ABC transporter ATP-binding protein; SMART: AAA ATPase YP_004115147.1 PFAM: extracellular solute-binding protein family 5; KEGG: eta:ETA_21900 putative ABC transporter periplasmic binding protein YliB YP_004115148.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_21890 putative ABC transporter permease protein YP_004115149.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1553 binding-protein-dependent transport systems inner membrane component YP_004115150.1 KEGG: ctu:Ctu_33010 methyl-accepting chemotaxis citrate transducer; PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein YP_004115151.1 TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: esa:ESA_02503 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB YP_004115152.1 KEGG: ddc:Dd586_3040 carbonate dehydratase; PFAM: carbonic anhydrase YP_004115153.1 KEGG: spe:Spro_4813 hypothetical protein YP_004115154.1 PFAM: glucose sorbosone dehydrogenase; KEGG: ebd:ECBD_2786 glucose sorbosone dehydrogenase YP_004115155.1 KEGG: eta:ETA_21870 putative hydrolase; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_004115156.1 KEGG: eta:ETA_21860 D-alanyl-D-alanine carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_004115157.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: eta:ETA_21840 undecaprenyl pyrophosphate phosphatase; SMART: phosphoesterase PA-phosphatase related YP_004115158.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: eta:ETA_21830 putative phosphoesterase YP_004115159.1 KEGG: eta:ETA_21820 hypothetical protein; TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain protein; TrkA-C domain protein YP_004115160.1 KEGG: pwa:Pecwa_1953 hypothetical protein YP_004115161.1 KEGG: cko:CKO_02258 glutaredoxin 1; TIGRFAM: glutaredoxin, GrxA family; PFAM: glutaredoxin YP_004115162.1 KEGG: eca:ECA2247 AraC family transcription regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: Helix-turn-helix, AraC domain YP_004115163.1 KEGG: cro:ROD_04021 hypothetical protein YP_004115164.1 PFAM: protein of unknown function DUF1418; KEGG: yen:YE1481 hypothetical protein YP_004115165.1 PFAM: nitroreductase; KEGG: ctu:Ctu_14590 oxygen-insensitive NADPH nitroreductase YP_004115166.1 KEGG: ctu:Ctu_14600 ribosomal protein S6 modification protein; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp YP_004115167.1 PFAM: Sensory transduction regulator, putative; KEGG: eta:ETA_21780 hypothetical protein YP_004115168.1 PFAM: extracellular solute-binding protein family 1; KEGG: eta:ETA_21770 putrescine transporter subunit: periplasmic-binding component of ABC superfamily YP_004115169.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; KEGG: esa:ESA_02482 putrescine transporter ATP-binding subunit; SMART: AAA ATPase YP_004115170.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_21750 putrescine transporter subunit: membrane component of ABC superfamily YP_004115171.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_21740 putrescine transporter subunit: membrane component of ABC superfamily YP_004115172.1 PFAM: Protein of unknown function DUF2593; KEGG: eta:ETA_21730 inner membrane protein YP_004115173.1 KEGG: ypp:YPDSF_2360 23S rRNA methyluridine methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumB; PFAM: (Uracil-5)-methyltransferase YP_004115174.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: pct:PC1_1698 cationic amino acid ABC transporter, periplasmic binding protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004115175.1 KEGG: kpe:KPK_3669 arginine transporter permease subunit ArtM; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004115176.1 KEGG: eta:ETA_21700 arginine transporter permease subunit ArtQ; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004115177.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: spe:Spro_1655 cationic amino acid ABC transporter, periplasmic binding protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004115178.1 KEGG: sdy:SDY_2404 arginine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115179.1 KEGG: eta:ETA_21670 putative lipoprotein YbjP YP_004115180.1 KEGG: eoi:ECO111_0936 1,6-anhydro-N-acetylmuramic acid-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_004115181.1 KEGG: ctu:Ctu_14810 low specificity L-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_004115182.1 PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: eta:ETA_21640 pyruvate dehydrogenase YP_004115183.1 PFAM: protein of unknown function DUF340 membrane; KEGG: eic:NT01EI_2498 hypothetical protein YP_004115184.1 KEGG: eta:ETA_21630 hypothetical protein YbjD YP_004115185.1 TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; KEGG: spe:Spro_1672 cold-shock DNA-binding domain-containing protein; SMART: Cold shock protein YP_004115186.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: eta:ETA_21620 ATP-dependent Clp protease adaptor protein ClpS YP_004115187.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: eta:ETA_21610 ATP-dependent Clp protease ATP-binding subunit; SMART: AAA ATPase YP_004115188.1 KEGG: dze:Dd1591_2366 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_004115189.1 TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: eta:ETA_21590 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_004115190.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: eum:ECUMN_1081 cysteine/glutathione ABC transporter membrane/ATP-binding component; SMART: AAA ATPase YP_004115191.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: dze:Dd1591_2363 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; SMART: AAA ATPase YP_004115192.1 KEGG: eta:ETA_21560 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004115193.1 KEGG: eta:ETA_21550 leucine-responsive transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type YP_004115194.1 PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: eta:ETA_21540 DNA translocase FtsK YP_004115195.1 KEGG: ses:SARI_02003 outer-membrane lipoprotein carrier protein; TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA YP_004115196.1 KEGG: sew:SeSA_A1076 recombination factor protein RarA; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_004115197.1 KEGG: eta:ETA_21510 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_004115198.1 PFAM: major facilitator superfamily MFS_1; KEGG: eta:ETA_21500 putative MFS family transporter protein YP_004115199.1 TIGRFAM: pyruvate formate-lyase activating enzyme; KEGG: ent:Ent638_1422 pyruvate formate lyase-activating enzyme 1; PFAM: Radical SAM domain protein YP_004115200.1 TIGRFAM: formate acetyltransferase; KEGG: cro:ROD_09721 formate acetyltransferase 1; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical YP_004115201.1 KEGG: spe:Spro_1703 formate transporter; TIGRFAM: formate/nitrite transporter; PFAM: formate/nitrite transporter YP_004115202.1 PFAM: protein of unknown function DUF181; KEGG: eta:ETA_21460 conserved hypothetical protein YcaO YP_004115203.1 TIGRFAM: phosphoserine aminotransferase; KEGG: eta:ETA_21450 phosphoserine aminotransferase; PFAM: aminotransferase class V YP_004115204.1 KEGG: cko:CKO_02164 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_004115205.1 TIGRFAM: cytidylate kinase; KEGG: ssn:SSON_0912 cytidylate kinase; PFAM: cytidylate kinase region YP_004115206.1 KEGG: eta:ETA_21420 30S ribosomal protein S1; TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein YP_004115207.1 TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: eta:ETA_21410 integration host factor subunit beta; SMART: histone family protein DNA-binding protein YP_004115208.1 KEGG: eta:ETA_21400 putative competence-related protein; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein YP_004115209.1 TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: eta:ETA_21390 lipid transporter ATP-binding/permease protein; SMART: AAA ATPase YP_004115210.1 TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: dze:Dd1591_2308 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_004115211.1 PFAM: protein of unknown function DUF1006; KEGG: kpu:KP1_1916 hypothetical protein YP_004115212.1 PFAM: protein of unknown function DUF343; KEGG: eta:ETA_21370 putative inner membrane protein YcaR YP_004115213.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: kpe:KPK_3614 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase YP_004115214.1 PFAM: aminoglycoside phosphotransferase; KEGG: spe:Spro_1720 hypothetical protein YP_004115215.1 PFAM: protein of unknown function DUF218; KEGG: ses:SARI_01972 hypothetical protein YP_004115216.1 PFAM: Methyltransferase type 12; KEGG: eta:ETA_21330 putative metallothionein SmtA YP_004115217.1 PFAM: chromosome segregation and condensation protein MukF; KEGG: eta:ETA_21320 condesin subunit F YP_004115218.1 PFAM: chromosome segregation and condensation protein MukE; KEGG: eta:ETA_21310 condesin subunit E YP_004115219.1 PFAM: chromosome segregation and condensation protein MukB domain protein; KEGG: eta:ETA_21300 cell division protein MukB YP_004115220.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: eta:ETA_21290 hypothetical protein YP_004115221.1 PFAM: protein of unknown function DUF882; KEGG: eta:ETA_21280 hypothetical protein YP_004115222.1 KEGG: esa:ESA_02415 hypothetical protein YP_004115223.1 KEGG: spe:Spro_1729 aromatic amino acid aminotransferase; PFAM: aminotransferase class I and II YP_004115224.1 PFAM: porin Gram-negative type; KEGG: sgl:SG1007 outer membrane protein F YP_004115225.1 TIGRFAM: asparaginyl-tRNA synthetase; KEGG: eta:ETA_21240 asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_004115226.1 KEGG: eta:ETA_21230 nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like YP_004115227.1 KEGG: eta:ETA_21220 aminopeptidase N; TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase YP_004115228.1 KEGG: eta:ETA_21210 aliphatic sulfonates transport ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115229.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_21200 aliphatic sulfonates transport permease protein YP_004115230.1 KEGG: eta:ETA_21190 alkanesulfonate monooxygenase; TIGRFAM: alkanesulfonate monooxygenase, FMNH(2)-dependent; PFAM: Luciferase-like, subgroup YP_004115231.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: eum:ECUMN_1132 alkanesulfonate transporter substrate-binding subunit; SMART: extracellular solute-binding protein family 3 YP_004115232.1 TIGRFAM: FMN reductase; KEGG: eta:ETA_21170 NAD(P)H-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase YP_004115233.1 PFAM: glycosyl transferase family 2; KEGG: abu:Abu_1811 glycosyltransferase YP_004115234.1 PFAM: polysaccharide biosynthesis protein; KEGG: bpy:Bphyt_6018 polysaccharide biosynthesis protein YP_004115235.1 TIGRFAM: dihydroorotate dehydrogenase; KEGG: eta:ETA_21150 dihydroorotate dehydrogenase; PFAM: dihydroorotate oxidase YP_004115236.1 PFAM: protein of unknown function DUF1379; KEGG: kpu:KP1_1947 hypothetical protein YP_004115237.1 PFAM: MOSC domain protein beta barrel domain protein; MOSC domain containing protein; ferredoxin; KEGG: eta:ETA_21130 conserved hypothetical protein YcbX YP_004115238.1 KEGG: esa:ESA_02399 23S rRNA m(2)G2445 methyltransferase; PFAM: putative RNA methylase; THUMP domain protein; Protein of unknown function methylase putative YP_004115239.1 KEGG: eta:ETA_21110 ABC transporter ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115240.1 KEGG: eta:ETA_21100 paraquat-inducible protein A; TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A YP_004115241.1 PFAM: Mammalian cell entry related domain protein; KEGG: eta:ETA_21090 paraquat-inducible protein B YP_004115242.1 PFAM: protein of unknown function DUF330; KEGG: ctu:Ctu_15580 uncharacterized lipoprotein YmbA YP_004115243.1 KEGG: dze:Dd1591_1685 ribosome modulation factor; manually curated; PFAM: ribosome modulation factor YP_004115244.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; KEGG: eta:ETA_21060 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004115245.1 KEGG: eta:ETA_21050 putative protease La homolog YP_004115246.1 PFAM: protein of unknown function DUF1047; KEGG: efe:EFER_1093 hypothetical protein YP_004115247.1 PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: eta:ETA_21030 outer membrane protein A YP_004115248.1 PFAM: cell division inhibitor SulA; KEGG: elf:LF82_2208 cell division inhibitor YP_004115249.1 PFAM: TfoX domain protein; KEGG: eta:ETA_21010 regulator of competence-specific genes YP_004115250.1 KEGG: eta:ETA_21000 putative integral membrane protein; TIGRFAM: hypothetical protein; integral membrane protein, YccS/YhfK family; PFAM: protein of unknown function DUF893 YccS/YhfK YP_004115251.1 PFAM: protein of unknown function DUF307; KEGG: dze:Dd1591_1213 protein of unknown function DUF307 YP_004115252.1 PFAM: UvrD/REP helicase; KEGG: spe:Spro_1759 DNA helicase IV YP_004115253.1 TIGRFAM: methylglyoxal synthase; KEGG: kpu:KP1_1965 methylglyoxal synthase; PFAM: MGS domain protein YP_004115254.1 PFAM: Protein of unknown function DUF2057; KEGG: eta:ETA_20960 hypothetical protein YP_004115255.1 PFAM: CoA-binding domain protein; KEGG: stm:STM1078 putative cytoplasmic protein YP_004115256.1 KEGG: ctu:Ctu_15740 heat shock protein HspQ; TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region YP_004115257.1 KEGG: eta:ETA_20930 SAM-dependent methyltransferase; SMART: PUA domain containing protein YP_004115258.1 PFAM: acylphosphatase; KEGG: ctu:Ctu_15760 acylphosphatase YP_004115259.1 KEGG: eta:ETA_20910 sulfurtransferase (tRNA 2-thiouridine synthesizing protein E); TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein YP_004115260.1 PFAM: protein of unknown function UPF0005; KEGG: eta:ETA_20900 hypothetical protein YP_004115261.1 KEGG: eta:ETA_20890 glucose-1-phosphatase/inositol phosphatase; PFAM: histidine acid phosphatase YP_004115262.1 PFAM: Aldehyde Dehydrogenase; KEGG: eta:ETA_20880 putative NAD-dependent aldehyde dehydrogenase YP_004115263.1 KEGG: eta:ETA_20870 hypothetical protein YP_004115264.1 KEGG: ypb:YPTS_1860 TrpR binding protein WrbA; TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase YP_004115265.1 PFAM: Stress-induced protein, KGG, repeat; KEGG: stm:STM1121 putative cytoplasmic protein YP_004115266.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eic:NT01EI_2334 hypothetical protein YP_004115267.1 KEGG: esa:ESA_02368 hypothetical protein; TIGRFAM: pyrimidine utilization transport protein G; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_004115268.1 KEGG: spe:Spro_1819 flavin reductase domain-containing protein; TIGRFAM: pyrimidine utilization flavin reductase protein F; PFAM: flavin reductase domain protein FMN-binding YP_004115269.1 KEGG: spe:Spro_1820 alpha/beta hydrolase fold; TIGRFAM: pyrimidine utilization protein D; PFAM: alpha/beta hydrolase fold YP_004115270.1 KEGG: spe:Spro_1821 endoribonuclease L-PSP; TIGRFAM: pyrimidine utilization protein C; PFAM: Endoribonuclease L-PSP YP_004115271.1 KEGG: ssn:SSON_1030 putative synthetase; TIGRFAM: pyrimidine utilization protein B; PFAM: isochorismatase hydrolase YP_004115272.1 KEGG: kpu:KP1_2027 putative enzyme; TIGRFAM: pyrimidine utilization protein A; PFAM: Luciferase-like, subgroup YP_004115273.1 PFAM: Tetracycline transcriptional regulator YcdC domain protein; regulatory protein TetR; KEGG: eta:ETA_20850 HTH-type transcriptional regulator (Rut operon repressor) YP_004115274.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: aav:Aave_3092 membrane-bound metal-dependent hydrolase YP_004115275.1 PFAM: amino acid permease-associated region; KEGG: eta:ETA_20830 D-serine/D-alanine/glycine transporter YP_004115276.1 PFAM: Extensin family protein; KEGG: pwa:Pecwa_2133 extensin family protein YP_004115277.1 KEGG: csa:Csal_2715 hypothetical protein YP_004115278.1 KEGG: eta:ETA_20820 regulatory protein; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR YP_004115279.1 KEGG: eta:ETA_20810 autoinducer synthase YP_004115280.1 PFAM: Protein of unknown function DUF2594; KEGG: eca:ECA2883 hypothetical protein YP_004115281.1 KEGG: eta:ETA_20780 response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004115282.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; helix-hairpin-helix motif; KEGG: kpe:KPK_1870 excinuclease ABC subunit C; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1 YP_004115283.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: pct:PC1_2667 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_004115285.1 KEGG: BFR1; Bfr1p YP_004115286.1 KEGG: lba:Lebu_1016 peptidase M48 Ste24p YP_004115287.1 KEGG: kpu:KP1_2169 hypothetical protein YP_004115288.1 KEGG: etw:ECSP_4693 LEE-encoded negative regulator of transcription YP_004115289.1 KEGG: ctu:Ctu_17430 hypothetical protein; TIGRFAM: phage terminase, small subunit, , P27 family; PFAM: terminase small subunit putative P27 YP_004115290.1 PFAM: Terminase; KEGG: ecm:EcSMS35_1186 putative phage terminase, large subunit YP_004115291.1 PFAM: protein of unknown function UPF0150; KEGG: pay:PAU_02193 hypothetical protein YP_004115292.1 PFAM: YcfA family protein; KEGG: pmr:PMI0818 hypothetical protein YP_004115293.1 KEGG: nar:Saro_3151 NAD-dependent epimerase/dehydratase YP_004115294.1 KEGG: hap:HAPS_1156 hypothetical protein YP_004115295.1 PFAM: outer membrane efflux protein; KEGG: bam:Bamb_3147 outer membrane efflux protein YP_004115296.1 KEGG: bam:Bamb_3148 HlyD family type I secretion membrane fusion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein YP_004115297.1 TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; peptidase C39 bacteriocin processing; KEGG: bam:Bamb_3149 ABC transporter related; SMART: AAA ATPase YP_004115298.1 KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein; TIGRFAM: outer membrane adhesin like proteiin; PFAM: FG-GAP repeat protein YP_004115299.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: yen:YE0973 putative membrane transport protein YP_004115300.1 KEGG: eta:ETA_19200 hypothetical protein YP_004115301.1 KEGG: eta:ETA_20710 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004115302.1 PFAM: major facilitator superfamily MFS_1; KEGG: eta:ETA_20700 putative transporter YP_004115303.1 PFAM: secretion protein HlyD family protein; KEGG: eta:ETA_20690 HlyD family secretion protein YP_004115304.1 KEGG: eta:ETA_20680 type I secretion outer membrane protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004115306.1 KEGG: kpu:KP1_1466 putative TonB-dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004115307.1 KEGG: ypb:YPTS_1734 hypothetical protein YP_004115308.1 KEGG: ypb:YPTS_1735 hypothetical protein YP_004115309.1 KEGG: psa:PST_2889 beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_004115310.1 KEGG: eta:ETA_20670 putative phospholipase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_004115311.1 KEGG: eta:ETA_20660 glucans biosynthesis protein; manually curated; PFAM: acyltransferase 3 YP_004115312.1 PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: eta:ETA_20650 glucan biosynthesis protein G YP_004115313.1 PFAM: glycosyl transferase family 2; KEGG: eta:ETA_20640 glucosyltransferase MdoH YP_004115314.1 PFAM: protein of unknown function DUF1375; KEGG: ssn:SSON_1064 hypothetical protein YP_004115315.1 KEGG: eta:ETA_20610 hypothetical protein YP_004115316.1 KEGG: fjo:Fjoh_4853 hypothetical protein YP_004115317.1 KEGG: eta:ETA_20600 lipid A biosynthesis lauroyl acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase YP_004115318.1 KEGG: eta:ETA_20590 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004115319.1 PFAM: YceI family protein; KEGG: cko:CKO_02010 hypothetical protein YP_004115320.1 PFAM: cytochrome B561; KEGG: ctu:Ctu_16350 cytochrome b561 homolog 2 YP_004115321.1 PFAM: FAD dependent oxidoreductase; KEGG: eta:ETA_20550 N-methyltryptophan oxidase YP_004115322.1 KEGG: eta:ETA_20540 biofilm formation regulatory protein BssS YP_004115323.1 KEGG: pct:PC1_2515 hypothetical protein YP_004115324.1 PFAM: DinI family protein; KEGG: esa:ESA_02287 hypothetical protein YP_004115325.1 TIGRFAM: dihydroorotase, homodimeric type; KEGG: eta:ETA_20520 dihydroorotase; PFAM: amidohydrolase YP_004115326.1 PFAM: protein of unknown function DUF1439; KEGG: eta:ETA_20510 hypothetical protein YP_004115327.1 KEGG: eta:ETA_20500 glutaredoxin 2; TIGRFAM: glutaredoxin, GrxB family; PFAM: glutaredoxin 2 domain protein YP_004115328.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpe:KPK_3480 multidrug resistance protein MdtH YP_004115329.1 KEGG: eta:ETA_20490 ribosomal-protein-S5-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004115330.1 PFAM: protein of unknown function DUF480; KEGG: efe:EFER_1862 hypothetical protein YP_004115331.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ctu:Ctu_16450 virulence factor MviM homolog YP_004115332.1 KEGG: eta:ETA_20450 virulence factor MviN, possible MOP superfamily efflux pump precursor; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein YP_004115333.1 PFAM: FlgN family protein; KEGG: eta:ETA_20440 flagellar biosynthesis protein YP_004115334.1 PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: ses:SARI_01825 anti-sigma28 factor FlgM YP_004115335.1 KEGG: eta:ETA_20420 flagellar biosynthesis; assembly of basal-body periplasmic P ring; TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein YP_004115336.1 KEGG: eta:ETA_20410 flagellar basal body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein YP_004115337.1 KEGG: eta:ETA_20400 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_004115338.1 PFAM: flagellar hook capping protein; KEGG: eta:ETA_20390 flagellar basal body rod modification protein YP_004115339.1 KEGG: eta:ETA_20380 flagellar hook protein FlgE; TIGRFAM: flagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_004115340.1 KEGG: eta:ETA_20370 flagellar basal body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; flagellar hook-basal body protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_004115341.1 KEGG: eta:ETA_20360 flagellar basal-body rod protein; TIGRFAM: flagellar basal-body rod protein FlgG; flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004115342.1 PFAM: flagellar L-ring protein; KEGG: eta:ETA_20350 flagellar basal body L-ring protein YP_004115343.1 PFAM: flagellar P-ring protein; KEGG: eta:ETA_20340 flagellar basal body P-ring protein YP_004115344.1 TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ-like; KEGG: eta:ETA_20330 flagellar rod assembly protein/muramidase FlgJ; SMART: Lysozyme subfamily 2 YP_004115345.1 KEGG: esa:ESA_02265 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004115346.1 KEGG: elf:LF82_0689 flagellar hook-associated protein 3; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein YP_004115347.1 KEGG: eta:ETA_20300 ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein YP_004115348.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: cko:CKO_01974 23S rRNA pseudouridylate synthase C; SMART: RNA-binding S4 domain protein YP_004115349.1 KEGG: etr:ETAE_2105 Maf-like protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_004115350.1 PFAM: protein of unknown function DUF177; KEGG: esa:ESA_02257 hypothetical protein YP_004115351.1 KEGG: sgl:SG1056 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_004115352.1 KEGG: eta:ETA_20250 fatty acid/phospholipid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein YP_004115353.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: spe:Spro_1904 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_004115354.1 KEGG: spe:Spro_1905 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase YP_004115355.1 KEGG: eta:ETA_20220 3-ketoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_004115356.1 KEGG: tau:Tola_2191 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding YP_004115357.1 KEGG: eta:ETA_20200 3-oxoacyl-(acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase YP_004115358.1 TIGRFAM: aminodeoxychorismate lyase; KEGG: ctu:Ctu_16750 aminodeoxychorismate lyase; PFAM: aminotransferase class IV YP_004115359.1 PFAM: aminodeoxychorismate lyase; KEGG: eta:ETA_20180 probable aminodeoxychorismate lyase YP_004115360.1 TIGRFAM: thymidylate kinase; KEGG: ypb:YPTS_2554 thymidylate kinase; PFAM: thymidylate kinase YP_004115361.1 KEGG: eta:ETA_20160 DNA polymerase III, delta' subunit; TIGRFAM: DNA polymerase III, delta prime subunit; PFAM: DNA polymerase III delta subunit YP_004115362.1 KEGG: eta:ETA_20150 putative metal-dependent hydrolase YcfH; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease YP_004115363.1 TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; KEGG: spe:Spro_1914 glucose-specific PTS system IIBC components; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004115364.1 PFAM: glycosyl hydrolase family 88; KEGG: dda:Dd703_0854 glycosyl hydrolase family 88 YP_004115365.1 KEGG: pct:PC1_3380 oligogalacturonide transporter YP_004115366.1 PFAM: histidine triad (HIT) protein; KEGG: kpu:KP1_2092 hypothetical protein YP_004115367.1 PFAM: protein of unknown function DUF1425; KEGG: eta:ETA_20120 hypothetical protein YP_004115368.1 TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: eta:ETA_20110 putative lipoprotein YP_004115369.1 KEGG: eta:ETA_20100 thiamine kinase; PFAM: aminoglycoside phosphotransferase YP_004115370.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: spe:Spro_1924 beta-hexosaminidase YP_004115371.1 PFAM: protein of unknown function UPF0227; KEGG: efe:EFER_1820 hypothetical protein YP_004115372.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eta:ETA_20080 NADH dehydrogenase YP_004115373.1 PFAM: 17 kDa surface antigen; KEGG: eci:UTI89_C1238 hypothetical protein YP_004115374.1 KEGG: mrd:Mrad2831_4872 hypothetical protein YP_004115375.1 KEGG: ypp:YPDSF_3808 hypothetical protein; PFAM: ABC transporter related; ABC transporter transmembrane region; peptidase C39 bacteriocin processing; SMART: AAA ATPase YP_004115376.1 KEGG: ypb:YPTS_0094 secretion protein HlyD family protein YP_004115377.1 TIGRFAM: transcription-repair coupling factor; PFAM: TRCF domain protein; transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: esa:ESA_02230 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein YP_004115378.1 KEGG: hypothetical protein ; K01636 YP_004115379.1 KEGG: esa:ESA_02229 outer membrane-specific lipoprotein transporter subunit LolC; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214 YP_004115380.1 TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; KEGG: eta:ETA_19780 lipoprotein-releasing system ATP-binding protein; SMART: AAA ATPase YP_004115381.1 KEGG: eta:ETA_19770 outer membrane-specific lipoprotein transporter subunit LolE; TIGRFAM: lipoprotein releasing system, transmembrane protein LolE; lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214 YP_004115382.1 PFAM: Silent information regulator protein Sir2; KEGG: similar to NAD-dependent deacetylase sirtuin-5 (SIR2-like protein 5) YP_004115383.1 PFAM: extracellular solute-binding protein family 1; KEGG: cko:CKO_01930 spermidine/putrescine ABC transporter periplasmic substrate-binding protein YP_004115384.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cro:ROD_12041 spermidine/putrescine ABC transporter, permease protein YP_004115385.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ctu:Ctu_17020 spermidine/putrescine transport system permease protein PotB YP_004115386.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; KEGG: ctu:Ctu_17030 spermidine/putrescine import ATP-binding protein PotA; SMART: AAA ATPase YP_004115387.1 TIGRFAM: peptidase T; KEGG: pct:PC1_1863 peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_004115388.1 KEGG: eta:ETA_19720 conserved hypothetical protein YcfD; PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein YP_004115389.1 KEGG: eta:ETA_19710 sensor protein PhoQ; PFAM: PhoQ Sensor domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004115390.1 KEGG: spe:Spro_2013 DNA-binding transcriptional regulator PhoP; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_004115391.1 KEGG: eta:ETA_19690 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase domain protein YP_004115392.1 PFAM: protein of unknown function DUF489; KEGG: eta:ETA_19680 hypothetical protein YP_004115393.1 KEGG: ctu:Ctu_17100 tRNA-specific 2-thiouridylase MnmA; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like YP_004115394.1 PFAM: NUDIX hydrolase; KEGG: cko:CKO_01837 hypothetical protein YP_004115395.1 KEGG: esa:ESA_02210 hypothetical protein; manually curated; PFAM: pseudouridine synthase YP_004115396.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: ctu:Ctu_17140 isocitrate dehydrogenase [NADP]; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004115397.1 PFAM: Protein of unknown function DUF2569; KEGG: cro:ROD_04031 hypothetical protein YP_004115398.1 PFAM: Methyltransferase type 11; KEGG: rfr:Rfer_3515 UbiE/COQ5 methyltransferase YP_004115399.1 KEGG: esa:ESA_02980 hypothetical protein YP_004115400.1 KEGG: bbr:BB0846 hypothetical protein YP_004115401.1 PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; KEGG: vcm:VCM66_A0026 chitinase; SMART: chitinase II YP_004115402.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: spe:Spro_2752 protein of unknown function DUF883, ElaB YP_004115403.1 KEGG: sed:SeD_A0619 hypothetical protein YP_004115404.1 PFAM: Ppx/GppA phosphatase; KEGG: bba:Bd1525 hypothetical protein YP_004115405.1 KEGG: asu:Asuc_1228 hypothetical protein YP_004115406.1 KEGG: psa:PST_0970 type 4 fimbrial biogenesis protein PilY1 YP_004115408.1 KEGG: esa:ESA_01819 hypothetical protein YP_004115409.1 PFAM: protein of unknown function DUF903; KEGG: yen:YE3302 lipoprotein YP_004115410.1 KEGG: esa:ESA_03215 hypothetical protein YP_004115411.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_01386 histone acetyltransferase HPA2-like acetyltransferase YP_004115412.1 KEGG: eta:ETA_19380 hypothetical protein YP_004115413.1 KEGG: eta:ETA_19370 muramoyltetrapeptide carboxypeptidase A; PFAM: peptidase U61 LD-carboxypeptidase A YP_004115414.1 PFAM: Lytic transglycosylase catalytic; KEGG: eta:ETA_19360 membrane-bound lytic murein transglycosylase E YP_004115415.1 PFAM: putative sugar-binding domain protein; KEGG: kpn:KPN_00595 putative sugar-binding region YP_004115416.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_00600 D-ribose periplasmic binding protein YP_004115417.1 PFAM: periplasmic lipoprotein; KEGG: kpn:KPN_00599 hypothetical protein YP_004115418.1 KEGG: kpn:KPN_00598 putative ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115419.1 PFAM: inner-membrane translocator; KEGG: kpn:KPN_00597 putative inner-membrane translocator YP_004115420.1 PFAM: Transketolase domain protein; KEGG: pwa:Pecwa_2647 transketolase domain protein YP_004115421.1 PFAM: Transketolase domain protein; Transketolase central region; KEGG: kpn:KPN_00593 putative transketolase C-terminal section YP_004115422.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: ypb:YPTS_0853 carbohydrate kinase FGGY YP_004115423.1 PFAM: YcgR family protein; type IV pilus assembly PilZ; KEGG: eta:ETA_19350 putative inner membrane protein YP_004115424.1 PFAM: Transglycosylase-associated protein; KEGG: kpu:KP1_3256 hypothetical protein YP_004115425.1 manually curated; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rme:Rmet_4290 AraC family transcriptional regulator; SMART: Helix-turn-helix, AraC domain YP_004115426.1 KEGG: esa:ESA_02207 hypothetical protein YP_004115427.1 KEGG: esa:ESA_02208 hypothetical protein YP_004115428.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_0029 short chain dehydrogenase YP_004115429.1 KEGG: eta:ETA_30310 ferrioxamine receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor YP_004115430.1 KEGG: eta:ETA_19330 periplasmic trehalase; PFAM: glycoside hydrolase family 37 YP_004115431.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: eta:ETA_14400 putative 2-hydroxyacid dehydrogenase YcdW YP_004115432.1 KEGG: eca:ECA2529 putative hydrolase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_004115433.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: eta:ETA_14430 conserved hypothetical protein YcdY YP_004115434.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: spe:Spro_3047 L-carnitine dehydratase/bile acid-inducible protein F YP_004115435.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eta:ETA_14440 predicted permease of the drug/metabolite transporter (DMT) superfamily YP_004115436.1 PFAM: glutamine amidotransferase class-I; KEGG: ddc:Dd586_2720 glutamine amidotransferase class-I YP_004115437.1 PFAM: Methyltransferase type 12; KEGG: eta:ETA_25830 hypothetical protein YP_004115438.1 PFAM: Aldehyde Dehydrogenase; KEGG: psa:PST_3679 aldehyde dehydrogenase family protein YP_004115439.1 KEGG: bxe:Bxe_C1162 polar amino acid ABC transporter periplasmic ligand-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004115440.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: msm:MSMEG_4870 FAD binding domain-containing protein YP_004115441.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: lsp:Bsph_3349 bacilysin biosynthesis oxidoreductase BacC YP_004115442.1 KEGG: tcu:Tcur_3681 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115443.1 KEGG: bxe:Bxe_C1161 polar amino acid ABC transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004115444.1 PFAM: Luciferase-like, subgroup; KEGG: ara:Arad_9360 luciferase protein YP_004115445.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: pla:Plav_1952 Rieske (2Fe-2S) domain-containing protein YP_004115446.1 PFAM: aldo/keto reductase; KEGG: msl:Msil_3336 aldo/keto reductase YP_004115447.1 KEGG: mei:Msip34_0949 glutamine synthetase, type III; TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region YP_004115448.1 PFAM: regulatory protein TetR; KEGG: sgl:SG1901 hypothetical protein YP_004115449.1 KEGG: mfa:Mfla_2563 homoserine O-acetyltransferase YP_004115450.1 KEGG: tnp:Tnap_1436 protein of unknown function DUF369 YP_004115451.1 KEGG: bxe:Bxe_A1481 hypothetical protein YP_004115453.1 KEGG: eta:ETA_19280 fumarase A; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region YP_004115454.1 KEGG: eta:ETA_19270 putative tartrate carrier (tartrate transporter) (tartrate/succinate antiporter); TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter YP_004115455.1 KEGG: eta:ETA_19260 putative NADH:flavin oxidoreductase; TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; NADH:flavin oxidoreductase/NADH oxidase YP_004115456.1 PFAM: ApbE family lipoprotein; KEGG: eta:ETA_19250 putative thiamine biosynthesis protein YP_004115457.1 KEGG: eta:ETA_19240 DNA-binding transcriptional activator DcuR; PFAM: response regulator receiver; SMART: response regulator receiver YP_004115458.1 KEGG: cko:CKO_03745 sensory histidine kinase DcuS; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein YP_004115459.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: eta:ETA_07790 peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A YP_004115460.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: cko:CKO_00831 hypothetical protein YP_004115461.1 KEGG: ctu:Ctu_09230 hypothetical protein YP_004115462.1 KEGG: ent:Ent638_1908 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein YP_004115463.1 KEGG: pct:PC1_3748 ABC transporter, substrate binding protein YP_004115464.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pct:PC1_3747 binding-protein-dependent transport systems inner membrane component YP_004115465.1 KEGG: eca:ECA3954 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115466.1 TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; KEGG: apt:APA01_21550 glucose dehydrogenase, methanol dehydrogenase subunit 1; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone YP_004115467.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: kpu:KP1_2205 DNA polymerase V subunit D YP_004115468.1 PFAM: glycoside hydrolase family 28; KEGG: pct:PC1_2125 glycoside hydrolase family 28 YP_004115469.1 TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; KEGG: esa:ESA_01334 trehalose-6-phosphate phosphatase; PFAM: trehalose-phosphatase YP_004115470.1 TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: eta:ETA_14570 trehalose-6-phosphate synthase; PFAM: glycosyl transferase family 20 YP_004115471.1 PFAM: flagellar transcriptional activator; KEGG: eta:ETA_14580 transcriptional activator FlhD YP_004115472.1 PFAM: flagellar transcriptional activator FlhC; KEGG: cro:ROD_19441 flagellar transcriptional activator YP_004115473.1 KEGG: eta:ETA_14600 flagellar motor protein MotA YP_004115474.1 PFAM: OmpA/MotB domain protein; KEGG: eta:ETA_14610 chemotaxis protein YP_004115475.1 KEGG: eta:ETA_14620 chemotaxis protein CheA; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; CheY binding; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein YP_004115476.1 KEGG: eta:ETA_14630 purine-binding chemotaxis protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_004115477.1 KEGG: eta:ETA_14640 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; ligand binding Tar domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; ligand binding Tar domain protein YP_004115478.1 KEGG: eta:ETA_14640 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004115479.1 KEGG: eta:ETA_14650 Tsr, subunit of methyl-accepting chemotaxis protein I; PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein YP_004115480.1 PFAM: MCP methyltransferase CheR-type; KEGG: eta:ETA_14680 chemotaxis methyltransferase CheR; SMART: MCP methyltransferase CheR-type YP_004115481.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: eta:ETA_14690 chemotaxis response regulator protein-glutamate methylesterase; SMART: response regulator receiver YP_004115482.1 KEGG: eta:ETA_14700 chemotaxis regulatory protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver YP_004115483.1 PFAM: Chemotaxis phosphatase CheZ; KEGG: esa:ESA_01353 chemotaxis regulator CheZ YP_004115484.1 KEGG: dda:Dd703_3530 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004115485.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dda:Dd703_3527 short-chain dehydrogenase/reductase SDR YP_004115486.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: dda:Dd703_3526 periplasmic binding protein/LacI transcriptional regulator YP_004115487.1 PFAM: periplasmic lipoprotein; KEGG: ddc:Dd586_0441 periplasmic lipoprotein YP_004115488.1 KEGG: dda:Dd703_3524 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115489.1 PFAM: inner-membrane translocator; KEGG: dda:Dd703_3523 inner-membrane translocator YP_004115490.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cro:ROD_05821 acetoin reductase YP_004115491.1 KEGG: eta:ETA_18620 hypothetical protein YP_004115492.1 PFAM: porin Gram-negative type; KEGG: eta:ETA_18600 outer membrane pore protein E YP_004115493.1 KEGG: esa:ESA_02157 bifunctional succinylornithine transaminase/acetylornithine transaminase; TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III YP_004115494.1 TIGRFAM: arginine N-succinyltransferase; arginine/ornithine succinyltransferase subunit; KEGG: eta:ETA_18580 arginine succinyltransferase; PFAM: arginine N-succinyltransferase beta subunit YP_004115495.1 KEGG: eta:ETA_18570 N-succinylglutamate 5-semialdehyde dehydrogenase; TIGRFAM: succinylglutamic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004115496.1 TIGRFAM: succinylarginine dihydrolase; KEGG: ecq:ECED1_1947 succinylarginine dihydrolase; PFAM: Succinylarginine dihydrolase YP_004115497.1 TIGRFAM: succinylglutamate desuccinylase; KEGG: eta:ETA_18550 succinylglutamate desuccinylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase YP_004115498.1 PFAM: protein of unknown function Spy-related; KEGG: eta:ETA_18530 periplasmic protein YP_004115499.1 KEGG: etw:ECSP_2309 endonuclease of nucleotide excision repair; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein YP_004115500.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: esa:ESA_02149 hypothetical protein YP_004115501.1 KEGG: eta:ETA_18510 NAD synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase YP_004115502.1 KEGG: eta:ETA_18500 putative drug resistance transporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004115503.1 PFAM: regulatory protein TetR; KEGG: ecz:ECS88_1431 putative transcriptional repressor YP_004115504.1 PFAM: SmpA/OmlA domain protein; KEGG: eta:ETA_18490 DNA-binding transcriptional activator OsmE YP_004115505.1 KEGG: dda:Dd703_2832 hypothetical protein YP_004115506.1 PFAM: sodium:dicarboxylate symporter; KEGG: spe:Spro_2123 sodium:dicarboxylate symporter YP_004115507.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: eta:ETA_18470 hypothetical protein YP_004115508.1 KEGG: eic:NT01EI_1800 2-deoxy-D-gluconate 3-dehydrogenase, putative; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_004115509.1 KEGG: ypb:YPTS_2430 5-keto-4-deoxyuronate isomerase; PFAM: 5-keto 4-deoxyuronate isomerase YP_004115510.1 KEGG: cko:CKO_01535 hypothetical protein; PFAM: Enolase-like YP_004115511.1 KEGG: cro:ROD_13291 putative phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004115512.1 KEGG: kpu:KP1_2276 putative transmembrane protein YP_004115513.1 PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: eta:ETA_18440 putative fructosamine kinase YP_004115514.1 KEGG: ctu:Ctu_18350 uncharacterized protein YdiZ YP_004115515.1 PFAM: protein of unknown function DUF481; KEGG: eta:ETA_18420 conserved hypothetical protein YdiY YP_004115516.1 KEGG: eta:ETA_18410 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain protein; Anticodon-binding domain protein YP_004115517.1 manually curated; TIGRFAM: translation initiation factor IF-3; KEGG: ctu:Ctu_18460 translation initiation factor IF-3; PFAM: Translation initiation factor 3-like YP_004115518.1 KEGG: pay:PAU_01868 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35 YP_004115519.1 KEGG: cro:ROD_13401 50S ribosomal subunit protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20 YP_004115520.1 KEGG: kpu:KP1_3280 phenylalanyl-tRNA synthetase alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_004115521.1 KEGG: cko:CKO_01740 phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit YP_004115522.1 TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: eta:ETA_18350 integration host factor subunit alpha; SMART: histone family protein DNA-binding protein YP_004115523.1 PFAM: Protein of unknown function DUF2502; KEGG: yen:YE2196 hypothetical protein YP_004115524.1 PFAM: transport system permease protein; KEGG: stt:t1221 vtamin B12-transporter permease YP_004115525.1 KEGG: kpn:KPN_02167 putative glutathione peroxidase; PFAM: glutathione peroxidase YP_004115526.1 KEGG: ent:Ent638_1733 vitamin B12-transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115527.1 PFAM: NLP/P60 protein; KEGG: ctu:Ctu_18550 probable lipoprotein NlpC YP_004115528.1 PFAM: EAL domain protein; KEGG: eta:ETA_18320 conserved hypothetical protein YdiV YP_004115529.1 PFAM: protein of unknown function UPF0061; KEGG: eta:ETA_18310 hypothetical protein YP_004115530.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ent:Ent638_1743 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004115531.1 PFAM: protein of unknown function DUF299; KEGG: eta:ETA_18250 hypothetical protein YP_004115532.1 KEGG: eta:ETA_18240 phosphoenolpyruvate synthase; TIGRFAM: phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein YP_004115533.1 KEGG: sml:Smlt0970 hypothetical protein YP_004115534.1 KEGG: psp:PSPPH_1510 polysaccharide lyase family protein YP_004115535.1 PFAM: protein of unknown function UPF0118; KEGG: eta:ETA_18230 putative inner membrane protein YP_004115536.1 PFAM: FAD linked oxidase domain protein; KEGG: spe:Spro_2176 FAD linked oxidase domain-containing protein YP_004115537.1 KEGG: eta:ETA_18210 hypothetical protein YP_004115538.1 KEGG: eta:ETA_18200 iron-sulfur cluster assembly scaffold protein; TIGRFAM: FeS assembly scaffold SufA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_004115539.1 KEGG: eta:ETA_18190 cysteine desulfurase activator complex subunit SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein YP_004115540.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: eta:ETA_18180 cysteine desulfurase ATPase component; SMART: AAA ATPase YP_004115541.1 KEGG: eta:ETA_18170 component of SufB-SufC-SufD cysteine desulfurase; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein YP_004115542.1 KEGG: eta:ETA_18160 cysteine desulfurase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V YP_004115543.1 PFAM: Fe-S metabolism associated SufE; KEGG: yen:YE2167 cysteine desufuration protein SufE YP_004115544.1 KEGG: ypb:YPTS_2382 ErfK/YbiS/YcfS/YnhG family protein; manually curated; PFAM: ErfK/YbiS/YcfS/YnhG family protein YP_004115545.1 PFAM: LPP repeat-containing protein; KEGG: kpe:KPK_2187 major outer membrane lipoprotein YP_004115546.1 TIGRFAM: pyruvate kinase; KEGG: etr:ETAE_1850 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_004115547.1 KEGG: cro:ROD_14061 multidrug resistance protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004115548.1 TIGRFAM: riboflavin synthase, alpha subunit; KEGG: eta:ETA_18100 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein YP_004115549.1 KEGG: eta:ETA_18090 cyclopropane fatty acyl phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_004115550.1 KEGG: eta:ETA_18080 inner membrane transport protein YdhC; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004115551.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_18070 putative DNA-binding transcriptional regulator YP_004115552.1 KEGG: eta:ETA_18060 DNA-binding transcriptional repressor PurR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004115553.1 PFAM: NLP/P60 protein; KEGG: eta:ETA_18050 hypothetical protein YP_004115554.1 KEGG: pct:PC1_2386 glutaredoxin-like protein; TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin YP_004115555.1 TIGRFAM: ribonuclease T; PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: esa:ESA_02012 ribonuclease T; SMART: Exonuclease YP_004115556.1 TIGRFAM: lactoylglutathione lyase; KEGG: eta:ETA_18020 lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004115557.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: kpu:KP1_3062 N-ethylmaleimide reductase YP_004115558.1 PFAM: regulatory protein TetR; KEGG: esa:ESA_02009 hypothetical protein YP_004115559.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: eta:ETA_17990 putative cell division protein YP_004115560.1 PFAM: protein of unknown function DUF1289; KEGG: ctu:Ctu_19860 uncharacterized protein YdhL YP_004115561.1 PFAM: aldo/keto reductase; KEGG: sea:SeAg_B1735 oxidoreductase YdhF YP_004115562.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: esa:ESA_02005 superoxide dismutase YP_004115563.1 KEGG: hypothetical protein YP_004115564.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: eta:ETA_17940 putative transport protein YdhK YP_004115565.1 PFAM: secretion protein HlyD family protein; KEGG: eta:ETA_17930 conserved hypothetical protein YdhJ YP_004115566.1 PFAM: protein of unknown function DUF1656; KEGG: eta:ETA_17920 conserved hypothetical protein YdhI YP_004115567.1 KEGG: eta:ETA_17910 transcriptional regulator SlyA; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004115568.1 KEGG: eoi:ECO111_3575 hypothetical protein YP_004115569.1 KEGG: etw:ECSP_1209 putative member of ShlA/HecA/FhaA exoprotein family; TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein YP_004115570.1 KEGG: etw:ECSP_1210 putative outer membrane transporter of ShlA/HecA/FhaA exoprotein family; manually curated; Contains selenocysteine; PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein YP_004115571.1 KEGG: etw:ECSP_1211 putative acyl-carrier protein synthase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase YP_004115572.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: etw:ECSP_1212 putative fatty acyl chain reductase YP_004115573.1 KEGG: etw:ECSP_1213 putative fatty acyl chain dehydrase; manually curated; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004115574.1 KEGG: etw:ECSP_1214 putative acyl-carrier protein YP_004115575.1 PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: etw:ECSP_1215 putative aminomethyltransferase YP_004115576.1 PFAM: Beta-ketoacyl synthase; KEGG: etw:ECSP_1216 putative beta-ketoacyl-[acyl carrier protein] synthase YP_004115577.1 PFAM: Beta-ketoacyl synthase; KEGG: etw:ECSP_1217 hypothetical protein YP_004115578.1 KEGG: etw:ECSP_1218 hypothetical protein YP_004115579.1 KEGG: etw:ECSP_1219 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115580.1 KEGG: etw:ECSP_1220 hypothetical protein YP_004115581.1 PFAM: protein of unknown function DUF214; KEGG: ecs:ECs1294 hypothetical protein YP_004115582.1 KEGG: etw:ECSP_1222 hypothetical protein YP_004115583.1 KEGG: etw:ECSP_1223 hypothetical protein YP_004115584.1 PFAM: Acyl transferase; KEGG: etw:ECSP_1224 acyl transferase YP_004115585.1 KEGG: eoh:ECO103_1077 putative inner membrane protein YP_004115586.1 KEGG: cro:ROD_29001 hypothetical protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_004115587.1 PFAM: 17 kDa surface antigen; KEGG: sdy:SDY_1864 putative outer membrane protein YP_004115588.1 PFAM: protein of unknown function UPF0075; KEGG: eta:ETA_17890 anhydro-N-acetylmuramic acid kinase YP_004115589.1 PFAM: Protein of unknown function DUF2091, periplasmic; KEGG: sgl:SG1446 hypothetical protein YP_004115590.1 TIGRFAM: pyridoxamine 5'-phosphate oxidase; KEGG: cko:CKO_01650 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; Pyridoxine 5'-phosphate oxidase, dimerisation-like YP_004115591.1 SMART: RNA-binding S4 domain protein; TIGRFAM: tyrosyl-tRNA synthetase; KEGG: ypb:YPTS_2360 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein YP_004115592.1 TIGRFAM: pyridoxal kinase; KEGG: eta:ETA_17860 pyridoxamine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_004115593.1 PFAM: Glutathione S-transferase domain; KEGG: eta:ETA_17850 glutathionine S-transferase YP_004115594.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3091 LysR family transcriptional regulator YP_004115595.1 PFAM: Glutathione S-transferase domain; KEGG: spe:Spro_3092 glutathione S-transferase domain-containing protein YP_004115596.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: dze:Dd1591_1874 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_004115597.1 KEGG: esa:ESA_01993 putative tripeptide transporter permease; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region YP_004115598.1 KEGG: pap:PSPA7_1174 choline transporter; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter YP_004115599.1 KEGG: eta:ETA_17830 HTH-type transcriptional regulator; TIGRFAM: transcriptional repressor BetI; PFAM: regulatory protein TetR YP_004115600.1 KEGG: eta:ETA_17820 betaine aldehyde dehydrogenase; TIGRFAM: betaine aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004115601.1 KEGG: eta:ETA_17810 choline dehydrogenase; TIGRFAM: choline dehydrogenase; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase YP_004115602.1 KEGG: eta:ETA_26520 hypothetical protein; PFAM: glutamine amidotransferase class-I YP_004115603.1 KEGG: bcm:Bcenmc03_4162 stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_004115604.1 PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: ent:Ent638_1909 alcohol dehydrogenase YP_004115605.1 SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: ctu:Ctu_20010 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop YP_004115606.1 KEGG: eta:ETA_17790 electron transport complex RsxE subunit; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit YP_004115607.1 KEGG: eta:ETA_17780 electron transport complex protein RnfG; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein YP_004115608.1 KEGG: eta:ETA_17770 electron transport complex protein RnfD; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein YP_004115609.1 KEGG: eta:ETA_17760 electron transport complex protein; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004115610.1 KEGG: eta:ETA_17750 electron transport complex protein RnfB; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004115611.1 KEGG: eta:ETA_17740 electron transport complex protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit YP_004115612.1 PFAM: Protein of unknown function DUF2569; KEGG: eta:ETA_17730 putative inner membrane protein YdgK YP_004115613.1 PFAM: Haemolysin expression modulating family protein; KEGG: sgl:SG1456 OriC-binding nucleoid-associated protein YP_004115614.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: cro:ROD_32871 ABC transporter, substrate-binding protein YP_004115615.1 KEGG: esa:ESA_00235 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115616.1 PFAM: inner-membrane translocator; KEGG: ctu:Ctu_36290 inner membrane ABC transporter permease protein YtfT YP_004115617.1 PFAM: inner-membrane translocator; KEGG: efe:EFER_4309 inner membrane ABC transporter permease protein YjfF YP_004115618.1 PFAM: putative transposase YhgA family protein; KEGG: ypi:YpsIP31758_3726 putative transposase YP_004115619.1 KEGG: eta:ETA_17720 L-arabinose isomerase; PFAM: L-arabinose isomerase YP_004115620.1 KEGG: dze:Dd1591_2150 L-ribulokinase; TIGRFAM: L-ribulokinase; PFAM: Carbohydrate kinase, FGGY-like YP_004115621.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: cro:ROD_19531 L-arabinose ABC transporter, substrate-binding protein YP_004115622.1 KEGG: ctu:Ctu_25940 arabinose import ATP-binding protein AraG; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115623.1 PFAM: inner-membrane translocator; KEGG: ent:Ent638_2474 L-arabinose transporter permease protein YP_004115624.1 KEGG: eta:ETA_17670 DNA-binding transcriptional regulator AraC; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004115625.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: eta:ETA_17660 putative oxidoreductase YP_004115626.1 PFAM: glycoside hydrolase family 19; Carbohydrate-binding family V/XII; KEGG: vfi:VF_1059 basic endochitinase; SMART: Carbohydrate-binding family V/XII YP_004115627.1 TIGRFAM: adenosine deaminase; KEGG: eta:ETA_17650 adenosine deaminase; PFAM: adenosine/AMP deaminase YP_004115628.1 PFAM: aminotransferase class I and II; KEGG: ctu:Ctu_20140 protein MalY YP_004115629.1 TIGRFAM: PTS system, maltose and glucose-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; KEGG: kpn:KPN_01512 bifunctional maltose and glucose-specific PTS system components IICB; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004115630.1 KEGG: spe:Spro_2271 DNA-binding transcriptional repressor MalI; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004115631.1 PFAM: protein of unknown function DUF945; KEGG: eta:ETA_17640 hypothetical protein YP_004115632.1 TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: esa:ESA_01968 hypothetical protein; PFAM: mannose-6-phosphate isomerase type I YP_004115633.1 KEGG: eta:ETA_17630 fumarate hydratase; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like YP_004115634.1 KEGG: eta:ETA_17620 DNA replication terminus site-binding protein; TIGRFAM: DNA replication terminus site-binding protein; PFAM: site-binding protein DNA replication region YP_004115635.1 PFAM: major facilitator superfamily MFS_1; KEGG: ppw:PputW619_2449 major facilitator transporter YP_004115636.1 PFAM: protein of unknown function UPF0074; KEGG: kpu:KP1_4206 putative transcriptional regulator YP_004115637.1 KEGG: bte:BTH_I1707 ribonuclease E YP_004115638.1 KEGG: kpe:KPK_1162 RND family multidrug efflux permease protein OqxB; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004115639.1 KEGG: ent:Ent638_1891 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004115640.1 KEGG: kpu:KP1_4202 putative helix-turn-helix AraC-type trancriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004115641.1 PFAM: guanine-specific ribonuclease N1 and T1; KEGG: eta:ETA_17020 putative ribonuclease YP_004115642.1 PFAM: Barstar (barnase inhibitor); KEGG: pmr:PMI3640 ribonuclease inhibitor YP_004115643.1 PFAM: Virulence effector, SrfC; KEGG: pct:PC1_2095 putative virulence factor YP_004115644.1 PFAM: virulence protein SrfB; KEGG: dze:Dd1591_2101 virulence protein SrfB YP_004115645.1 KEGG: pwa:Pecwa_2381 putative virulence effector protein YP_004115646.1 KEGG: eta:ETA_19740 similar to benzoate membrane transport protein; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein YP_004115647.1 KEGG: ctu:Ctu_22310 uncharacterized HTH-type transcriptional regulator YdcN; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_004115648.1 KEGG: rpc:RPC_4713 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004115649.1 PFAM: isochorismatase hydrolase; KEGG: bgl:bglu_2g02920 isochorismatase hydrolase YP_004115650.1 KEGG: kpu:KP1_2972 probable TonB-dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004115651.1 KEGG: str:Sterm_4147 hypothetical protein YP_004115652.1 KEGG: cko:CKO_01719 hypothetical protein YP_004115653.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cko:CKO_01718 hypothetical protein YP_004115654.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: kpe:KPK_2679 NAD-dependent glycerol-3-phosphate dehydrogenase family protein YP_004115655.1 KEGG: ent:Ent638_3166 AraC family transcriptional regulator; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004115656.1 KEGG: spe:Spro_1875 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain YP_004115657.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: avn:Avin_31390 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein; SMART: extracellular solute-binding protein family 3 YP_004115658.1 KEGG: kpn:KPN_01809 proline dipeptidase; PFAM: peptidase M19 renal dipeptidase YP_004115659.1 manually curated; TIGRFAM: coenzyme PQQ biosynthesis protein A; KEGG: kpu:KP1_5525 pyrroloquinoline quinone synthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A YP_004115660.1 TIGRFAM: coenzyme PQQ biosynthesis protein B; KEGG: kpu:KP1_2861 pyrroloquinoline quinone synthesis protein B YP_004115661.1 TIGRFAM: coenzyme PQQ biosynthesis protein C; KEGG: kpe:KPK_2543 pyrroloquinoline quinone biosynthesis protein PqqC; PFAM: TENA/THI-4 domain protein YP_004115662.1 PFAM: coenzyme PQQ synthesis D; KEGG: kpe:KPK_2542 coenzyme PQQ synthesis protein D YP_004115663.1 TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; KEGG: kpe:KPK_2541 pyrroloquinoline quinone biosynthesis protein PqqE; SMART: Elongator protein 3/MiaB/NifB YP_004115664.1 KEGG: kpn:KPN_01813 pyrroloquinolinquinone synthase F; TIGRFAM: coenzyme PQQ biosynthesis protein PqqF; PFAM: peptidase M16 domain protein YP_004115665.1 PFAM: YceI family protein; KEGG: kpu:KP1_3298 hypothetical protein YP_004115666.1 KEGG: spe:Spro_1364 D-lactate dehydrogenase; PFAM: D-lactate dehydrogenase membrane binding ; FAD linked oxidase domain protein YP_004115667.1 PFAM: phosphofructokinase; KEGG: spe:Spro_2258 phosphofructokinase YP_004115668.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: spe:Spro_2257 phosphotransferase system lactose/cellobiose-specific IIB subunit YP_004115669.1 PFAM: putative sugar-specific permease SgaT/UlaA; KEGG: spe:Spro_2256 ascorbate-specific PTS system enzyme IIC YP_004115670.1 TIGRFAM: ketose-bisphosphate aldolase; KEGG: spe:Spro_2255 ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_004115671.1 KEGG: spe:Spro_2254 hypothetical protein YP_004115672.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: spe:Spro_2253 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_004115673.1 KEGG: kpe:KPK_5482 hypothetical protein YP_004115674.1 PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative-like; KEGG: bja:bll4605 hypothetical protein YP_004115675.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ent:Ent638_3901 short-chain dehydrogenase/reductase SDR YP_004115676.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: esa:ESA_00460 hypothetical protein YP_004115677.1 PFAM: Ribose/galactose isomerase; KEGG: stm:STM1933 hypothetical protein YP_004115678.1 KEGG: kpe:KPK_1631 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115679.1 KEGG: kpu:KP1_3752 putative dipeptide ABC transport system ATP-binding component; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004115680.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_2704 binding-protein-dependent transport systems inner membrane component YP_004115681.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_2705 binding-protein-dependent transport systems inner membrane component YP_004115682.1 PFAM: extracellular solute-binding protein family 5; KEGG: kpn:KPN_02538 putative ABC transport system periplasmic binding protein YP_004115683.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: cro:ROD_22211 putative mandelate racemase/muconate lactonising enzyme YP_004115684.1 PFAM: periplasmic binding protein; KEGG: pct:PC1_3040 periplasmic binding protein YP_004115685.1 PFAM: Amidase; KEGG: bja:bll6413 indole acetimide hydrolase YP_004115686.1 KEGG: bvi:Bcep1808_4970 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA YP_004115687.1 PFAM: class II aldolase/adducin family protein; KEGG: azc:AZC_2446 aldolase II superfamily protein YP_004115688.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2449 ABC transporter permease protein YP_004115689.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll3315 ABC transporter permease protein YP_004115690.1 KEGG: bja:bll3318 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115691.1 PFAM: NMT1/THI5 like domain protein; KEGG: bja:bll3316 ABC transporter substrate-binding protein YP_004115692.1 KEGG: azc:AZC_2444 transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004115693.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr3320 short chain dehydrogenase YP_004115694.1 PFAM: aminotransferase class I and II; KEGG: bja:blr3322 aspartate aminotransferase YP_004115695.1 PFAM: alpha/beta hydrolase fold; KEGG: azc:AZC_2441 abhydrolase 1 YP_004115696.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: bja:blr3323 allantoate amidohydrolase; PFAM: peptidase M20 YP_004115697.1 PFAM: major facilitator superfamily MFS_1; KEGG: ppf:Pput_2689 major facilitator transporter YP_004115698.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: sea:SeAg_B1538 L-idonate 5-dehydrogenase YP_004115699.1 PFAM: major facilitator superfamily MFS_1; KEGG: dda:Dd703_0945 major facilitator superfamily MFS_1 YP_004115700.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: set:SEN1435 putative hexonate dehydrogenase YP_004115701.1 KEGG: dda:Dd703_0943 regulatory protein GntR HTH; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004115702.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: dda:Dd703_0947 mandelate racemase/muconate lactonizing protein YP_004115703.1 TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; KEGG: atc:AGR_C_2119 hypothetical protein YP_004115704.1 PFAM: Domain of unknown function DUF1792; KEGG: ssa:SSA_0830 glycosyltransferase YP_004115705.1 KEGG: psb:Psyr_2574 quinoprotein; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone; manually curated; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; SMART: Pyrrolo-quinoline quinone beta-propeller repeat YP_004115706.1 KEGG: dze:Dd1591_3219 hypothetical protein YP_004115707.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: eta:ETA_13830 lysine exporter protein YP_004115708.1 KEGG: bte:BTH_I2428 hypothetical protein YP_004115709.1 KEGG: plu:plu3350 hypothetical protein YP_004115710.1 KEGG: spe:Spro_2479 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004115711.1 KEGG: spe:Spro_2478 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004115712.1 KEGG: spe:Spro_2477 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004115713.1 PFAM: regulatory protein TetR; KEGG: ddc:Dd586_2711 transcriptional regulator, TetR family YP_004115714.1 PFAM: regulatory protein TetR; KEGG: elf:LF82_p211 transcriptional repressor YP_004115715.1 PFAM: Pirin domain protein; KEGG: ara:Arad_7253 accessory protein YP_004115716.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_C0589 putative short-chain dehydrogenase/reductase YP_004115717.1 KEGG: bxe:Bxe_C1000 hypothetical protein YP_004115718.1 KEGG: avi:Avi_5082 2-hydroxyhepta-24-diene-1; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004115719.1 KEGG: hypothetical protein YP_004115720.1 KEGG: afr:AFE_0137 hypothetical protein YP_004115721.1 PFAM: Endoribonuclease L-PSP; KEGG: bja:blr1241 hypothetical protein YP_004115722.1 PFAM: transcriptional regulator PadR family protein; conserved hypothetical protein; KEGG: rce:RC1_3187 transcriptional regulator, PadR family protein YP_004115723.1 TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; KEGG: bmr:BMI_II1162 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, putative; PFAM: HpcH/HpaI aldolase YP_004115724.1 TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; KEGG: rlt:Rleg2_4445 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004115725.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rhi:NGR_b20150 putative 2-oxohepta-3-ene-1,7-dioic acid hydratase YP_004115726.1 PFAM: amidohydrolase 2; KEGG: bra:BRADO2388 putative metal-dependent hydrolase; putative amidohydrolase YP_004115727.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bpt:Bpet0515 hypothetical protein YP_004115728.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcj:BCAM1702 major facilitator superfamily protein YP_004115729.1 KEGG: rpa:RPA3761 putative catechol 2,3-dioxygenase; TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004115730.1 PFAM: alpha/beta hydrolase fold; KEGG: kpe:KPK_2547 hydrolase, alpha/beta fold family YP_004115731.1 KEGG: kpu:KP1_2858 putative two-component response transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_004115732.1 KEGG: kpe:KPK_2549 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004115733.1 KEGG: pmy:Pmen_0228 hypothetical protein YP_004115734.1 PFAM: cytochrome c biogenesis protein transmembrane region; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: kpu:KP1_2856 putative cytochrome c biogenesis protein YP_004115735.1 PFAM: Aldehyde Dehydrogenase; KEGG: bph:Bphy_3706 aldehyde dehydrogenase YP_004115736.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rme:Rmet_1897 LysR family transcriptional regulator YP_004115737.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ctu:Ctu_04760 hypothetical protein; SMART: GGDEF domain containing protein YP_004115738.1 PFAM: RES domain protein; KEGG: kpe:KPK_A0046 RES domain protein YP_004115739.1 PFAM: conserved hypothetical protein; KEGG: kpe:KPK_A0045 conserved hypothetical protein TIGR02293 YP_004115740.1 KEGG: pct:PC1_2465 lipoyltransferase and lipoate-protein ligase; TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase; Lipoate protein ligase-like YP_004115741.1 KEGG: psp:PSPPH_2651 hypothetical protein; PFAM: Domain of unknown function DUF2394 YP_004115742.1 KEGG: ect:ECIAI39_1403 putative ATP-dependent helicase Lhr; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004115743.1 PFAM: PEBP family protein; KEGG: esa:ESA_01515 hypothetical protein YP_004115744.1 KEGG: spe:Spro_3928 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004115745.1 KEGG: spe:Spro_3929 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115746.1 PFAM: inner-membrane translocator; KEGG: spe:Spro_3930 monosaccharide-transporting ATPase YP_004115747.1 KEGG: pwa:Pecwa_3887 hypothetical protein YP_004115748.1 KEGG: spe:Spro_3932 gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein YP_004115749.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: pwa:Pecwa_3889 malate/L-lactate dehydrogenase YP_004115750.1 PFAM: conserved hypothetical protein; KEGG: pwa:Pecwa_3890 hypothetical protein YP_004115751.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3935 major facilitator transporter YP_004115752.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: spe:Spro_3936 carbohydrate kinase FGGY YP_004115753.1 PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: spe:Spro_3937 3-keto-L-gulonate-6-phosphate decarboxylase YP_004115754.1 TIGRFAM: hexulose-6-phosphate isomerase; KEGG: spe:Spro_3938 putative L-xylulose 5-phosphate 3-epimerase; PFAM: Xylose isomerase domain protein TIM barrel YP_004115755.1 KEGG: pct:PC1_2362 L-ribulose-5-phosphate 4-epimerase; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein YP_004115756.1 KEGG: eca:ECA0731 putative ferric siderophore TonB-dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004115757.1 TIGRFAM: class II aldolase, tagatose bisphosphate family; ketose-bisphosphate aldolase; KEGG: pwa:Pecwa_2393 class II aldolase, tagatose bisphosphate family; PFAM: ketose-bisphosphate aldolase class-II YP_004115758.1 KEGG: cko:CKO_04536 hypothetical protein; TIGRFAM: sugar isomerase, AgaS family; PFAM: sugar isomerase (SIS) YP_004115760.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: cko:CKO_04535 hypothetical protein; PFAM: amidohydrolase YP_004115761.1 KEGG: ect:ECIAI39_3631 tagatose 6-phosphate aldolase 1, KbaZ subunit; TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ YP_004115762.1 KEGG: efe:EFER_4362 DNA-binding transcriptional regulator AgaR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004115763.1 PFAM: oxidoreductase domain protein; KEGG: rhi:NGR_b13070 oxidoreductase YP_004115764.1 KEGG: spe:Spro_2577 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004115765.1 PFAM: ROK family protein; KEGG: spe:Spro_2576 ROK family protein YP_004115766.1 KEGG: spe:Spro_2574 ABC transporter-related protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_004115767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2573 binding-protein-dependent transport systems inner membrane component YP_004115768.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2572 binding-protein-dependent transport systems inner membrane component YP_004115769.1 PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_2571 extracellular solute-binding protein YP_004115770.1 KEGG: spe:Spro_2570 hypothetical protein YP_004115771.1 KEGG: ddc:Dd586_2879 putative lipoprotein YP_004115772.1 KEGG: psb:Psyr_1687 rhomboid-like protein YP_004115773.1 KEGG: dda:Dd703_3697 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004115774.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dda:Dd703_3696 transcriptional regulator, LysR family YP_004115775.1 KEGG: csa:Csal_1724 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase YP_004115776.1 PFAM: Endoribonuclease L-PSP; KEGG: azc:AZC_2022 YjgF family protein YP_004115777.1 PFAM: Amidase; KEGG: bbt:BBta_4797 putative amidase YP_004115778.1 PFAM: major facilitator superfamily MFS_1; KEGG: dda:Dd703_3235 major facilitator superfamily MFS_1 YP_004115779.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dda:Dd703_3236 transcriptional regulator, LysR family YP_004115780.1 KEGG: met:M446_4546 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115781.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: vap:Vapar_5606 peptidase M20 YP_004115782.1 PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: vei:Veis_0721 FAD dependent oxidoreductase YP_004115783.1 KEGG: vap:Vapar_5604 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_004115784.1 KEGG: ara:Arad_9611 amino acid ABC transporter; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004115785.1 KEGG: vei:Veis_0724 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004115786.1 KEGG: vap:Vapar_5601 dihydropyrimidinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase YP_004115787.1 KEGG: vap:Vapar_5600 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004115788.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: bpy:Bphyt_6100 protein of unknown function DUF861 cupin_3 YP_004115789.1 KEGG: ddc:Dd586_3953 hypothetical protein YP_004115790.1 PFAM: Domain of unknown function DUF1989; KEGG: dda:Dd703_3315 hypothetical protein YP_004115791.1 KEGG: dda:Dd703_3314 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH YP_004115792.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC transporter related; binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_3313 polar amino acid ABC transporter, inner membrane subunit; SMART: AAA ATPase YP_004115793.1 KEGG: dda:Dd703_3312 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004115794.1 PFAM: NADPH-dependent FMN reductase; KEGG: apt:APA01_20570 chromate reductase YP_004115795.1 PFAM: porin Gram-negative type; KEGG: spe:Spro_3264 outer membrane porin protein C YP_004115796.1 KEGG: kpe:KPK_2329 hypothetical protein YP_004115797.1 PFAM: alpha/beta hydrolase fold; KEGG: kpu:KP1_3653 putative non-heme chloroperoxidase YP_004115798.1 KEGG: ret:RHE_PC00095 two-component nodulation response regulator protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004115799.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; Serine/threonine-protein kinase-like domain; GAF domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; KEGG: bpy:Bphyt_2428 PAS sensor protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; serine/threonine protein kinase; PAC repeat-containing protein; histidine kinase A domain protein YP_004115800.1 KEGG: ara:Arad_7180 two-component response regulator protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004115801.1 KEGG: rso:RSc0241 hypothetical protein; TIGRFAM: XapX domain protein; PFAM: protein of unknown function DUF1427 YP_004115802.1 KEGG: rso:RSc0241 hypothetical protein; TIGRFAM: XapX domain protein; PFAM: protein of unknown function DUF1427 YP_004115803.1 PFAM: isochorismatase hydrolase; KEGG: bxe:Bxe_C0186 hypothetical protein YP_004115804.1 PFAM: Amidohydrolase 3; KEGG: kpe:KPK_4338 amidohydrolase family protein YP_004115805.1 PFAM: DoxX family protein; KEGG: pfo:Pfl01_1964 DoxX YP_004115806.1 PFAM: protein of unknown function DUF894 DitE; KEGG: pde:Pden_3508 protein of unknown function DUF894, DitE YP_004115807.1 PFAM: alpha/beta hydrolase fold; KEGG: esa:ESA_pESA3p05471 hypothetical protein YP_004115808.1 PFAM: Pirin domain protein; KEGG: bvi:Bcep1808_6599 pirin domain-containing protein YP_004115809.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: ecz:ECS88_1512 glyceraldehyde-3-phosphate dehydrogenase C; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_004115810.1 KEGG: plu:plu2638 hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004115811.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RS02130 putative transcriptional regulator transcription regulator protein YP_004115812.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rso:RSp1578 agmatinase YP_004115813.1 KEGG: rpf:Rpic12D_2391 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004115814.1 KEGG: cti:RALTA_A0012 high-affinity glutamine transport protein, ABC transporter, membrane component; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004115815.1 KEGG: vei:Veis_3014 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004115816.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: ara:Arad_7959 agmatinase YP_004115817.1 PFAM: FAD dependent oxidoreductase; KEGG: rhi:NGR_b06770 putative oxidoreductase YP_004115818.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vpa:VP1864 hypothetical protein YP_004115819.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ent:Ent638_2003 GCN5-related N-acetyltransferase YP_004115820.1 KEGG: pct:PC1_3494 hypothetical protein YP_004115821.1 PFAM: GCN5-related N-acetyltransferase; KEGG: met:M446_2696 GCN5-related N-acetyltransferase YP_004115822.1 KEGG: esa:ESA_01875 hypothetical protein; PFAM: beta-lactamase YP_004115823.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: spe:Spro_1960 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_004115824.1 KEGG: pfl:PFL_2481 hypothetical protein YP_004115825.1 KEGG: kpn:KPN_03864 putative phosphatase; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_004115826.1 KEGG: abu-2; Activated in Blocked Unfolded protein response YP_004115827.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: spe:Spro_2318 monooxygenase FAD-binding YP_004115828.1 KEGG: eta:ETA_17490 peptidyl-dipeptidase; PFAM: peptidase M3A and M3B thimet/oligopeptidase F YP_004115829.1 KEGG: ppg:PputGB1_3844 xanthine dehydrogenase accessory protein XdhC; TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182 YP_004115830.1 TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; KEGG: spe:Spro_2301 xanthine dehydrogenase molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead YP_004115831.1 KEGG: spe:Spro_2300 xanthine dehydrogenase small subunit; TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; ferredoxin; CO dehydrogenase flavoprotein domain protein YP_004115832.1 KEGG: eta:ETA_17500 guanine deaminase; TIGRFAM: guanine deaminase; PFAM: amidohydrolase YP_004115833.1 KEGG: protein kinase family protein YP_004115834.1 KEGG: plu:plu3387 hypothetical protein YP_004115835.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: similar to oxidoreductase, short chain dehydrogenase/reductase family, putative YP_004115836.1 PFAM: protein of unknown function UPF0060; KEGG: cko:CKO_01576 hypothetical protein YP_004115837.1 PFAM: protein of unknown function DUF1283; KEGG: eta:ETA_17520 hypothetical protein YP_004115838.1 PFAM: protein of unknown function DUF1161; KEGG: eta:ETA_17530 hypothetical protein YP_004115839.1 PFAM: major facilitator superfamily MFS_1; KEGG: eta:ETA_17540 putative transporter YP_004115840.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_1924 binding-protein-dependent transport systems inner membrane component YP_004115841.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ent:Ent638_1923 substrate-binding region of ABC-type glycine betaine transport system YP_004115842.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_1922 binding-protein-dependent transport systems inner membrane component YP_004115843.1 TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: esa:ESA_01738 hypothetical protein; SMART: AAA ATPase; CBS domain containing protein YP_004115844.1 KEGG: kpn:KPN_01664 guanine/xanthin permease; TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_004115845.1 KEGG: cro:ROD_14721 putative dethiobiotin synthetase; TIGRFAM: dethiobiotin synthase; PFAM: Cobyrinic acid ac-diamide synthase YP_004115846.1 PFAM: ROK family protein; KEGG: spe:Spro_2283 ROK family protein YP_004115847.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_17590 putative transcriptional regulator, LysR family YP_004115848.1 PFAM: major facilitator superfamily MFS_1; KEGG: ctu:Ctu_22220 inner membrane transport protein YnfM YP_004115849.1 KEGG: dvm:DvMF_0755 hypothetical protein YP_004115850.1 PFAM: cytochrome B561; KEGG: pct:PC1_0697 cytochrome b561 YP_004115851.1 PFAM: major facilitator superfamily MFS_1; KEGG: eta:ETA_16970 sugar efflux transporter YP_004115852.1 PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_1392 hypothetical protein YP_004115854.1 PFAM: regulatory protein TetR; KEGG: sgl:SG2094 putative transcriptional repressor YP_004115855.1 KEGG: ctu:Ctu_01520 L-rhamnose mutarotase; TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718 YP_004115856.1 TIGRFAM: rhamnulose-1-phosphate aldolase; KEGG: esa:ESA_03850 rhamnulose-1-phosphate aldolase; PFAM: class II aldolase/adducin family protein YP_004115857.1 TIGRFAM: L-rhamnose isomerase; KEGG: cro:ROD_38481 L-rhamnose isomerase; PFAM: L-rhamnose isomerase YP_004115858.1 KEGG: ypi:YpsIP31758_3755 rhamnulokinase; TIGRFAM: rhamnulokinase; PFAM: Carbohydrate kinase, FGGY-like YP_004115859.1 KEGG: cko:CKO_03099 transcriptional activator RhaS; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004115860.1 KEGG: ypb:YPTS_0412 transcriptional activator RhaR; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain YP_004115861.1 KEGG: eum:ECUMN_4436 rhamnose-proton symporter; TIGRFAM: L-rhamnose-proton symporter, RhaT family, DMT superfamily; PFAM: RhaT l-rhamnose-proton symport 2 YP_004115862.1 KEGG: esa:ESA_01668 hypothetical protein YP_004115863.1 PFAM: Aldehyde Dehydrogenase; KEGG: pct:PC1_4133 aldehyde dehydrogenase YP_004115864.1 PFAM: major facilitator superfamily MFS_1; KEGG: dze:Dd1591_3120 major facilitator superfamily MFS_1 YP_004115865.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: dda:Dd703_2929 peptidase M20 YP_004115866.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dda:Dd703_2928 transcriptional regulator, LysR family YP_004115867.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2801 periplasmic dipeptide transport protein YP_004115868.1 TIGRFAM: peptidase T; KEGG: pwa:Pecwa_2931 peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_004115869.1 KEGG: dda:Dd703_2491 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004115870.1 PFAM: aminotransferase class I and II; KEGG: ent:Ent638_1969 putative aminotransferase YP_004115871.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ent:Ent638_1967 LysR family transcriptional regulator YP_004115872.1 KEGG: cko:CKO_04394 hypothetical protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004115873.1 PFAM: Carboxylesterase type B; KEGG: eta:ETA_16900 putative carboxylesterase YP_004115874.1 PFAM: DoxX family protein; KEGG: yen:YE1611 hypothetical protein YP_004115875.1 PFAM: protein of unknown function DUF1338; KEGG: kpe:KPK_2402 hypothetical protein YP_004115876.1 PFAM: major facilitator superfamily MFS_1; KEGG: eta:ETA_16890 4-hydroxybenzoate transporter YP_004115877.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cro:ROD_16151 LysR-family transcriptional regulator YP_004115878.1 KEGG: dda:Dd703_2096 Smr protein/MutS2; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2 YP_004115879.1 KEGG: ctu:Ctu_20340 fumarate nitrate reduction regulatory protein; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004115880.1 PFAM: UspA domain protein; KEGG: see:SNSL254_A1784 universal stress protein UspE YP_004115881.1 KEGG: esa:ESA_01956 pyridine nucleotide transhydrogenase; PFAM: NAD(P) transhydrogenase beta subunit YP_004115882.1 KEGG: spe:Spro_2585 NAD(P) transhydrogenase subunit alpha; TIGRFAM: NAD(P) transhydrogenase, alpha subunit; PFAM: alanine dehydrogenase/PNT domain protein YP_004115883.1 PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_2586 hypothetical protein YP_004115884.1 KEGG: eta:ETA_16800 putative arginine/ornithine antiporter; TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region YP_004115885.1 KEGG: eta:ETA_16790 hypothetical protein YP_004115886.1 KEGG: eta:ETA_16780 DNA-binding transcriptional regulator RstA; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_004115887.1 KEGG: eta:ETA_16770 sensor protein RstB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004115888.1 KEGG: ctu:Ctu_22230 hypothetical protein; PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase YP_004115889.1 KEGG: esa:ESA_02938 hypothetical protein YP_004115890.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: eta:ETA_16730 putative protease YdgD YP_004115891.1 TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; helicase domain protein; protein of unknown function DUF1605; KEGG: eta:ETA_16710 ATP-dependent RNA helicase HrpA; SMART: DEAD-like helicase ; AAA ATPase; helicase domain protein YP_004115892.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: cko:CKO_01439 azoreductase YP_004115893.1 PFAM: conserved hypothetical protein; KEGG: eta:ETA_16620 conserved hypothetical protein (UCP025560) YP_004115894.1 KEGG: eta:ETA_16610 putative lipoprotein YP_004115895.1 KEGG: eta:ETA_16600 hypothetical protein YP_004115896.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ses:SARI_01337 D-lactate dehydrogenase YP_004115897.1 PFAM: protein of unknown function DUF333; KEGG: eta:ETA_16580 conserved hypothetical protein YdbJ YP_004115898.1 KEGG: ecy:ECSE_1461 putative oxidoreductase Fe-S subunit; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding YP_004115899.1 KEGG: ent:Ent638_4271 hypothetical protein YP_004115900.1 PFAM: monooxygenase FAD-binding; KEGG: eta:ETA_13980 hypothetical protein YP_004115902.1 KEGG: pst:PSPTO_3574 TonB-dependent siderophore receptor, putative; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004115903.1 PFAM: PP-loop domain protein; KEGG: stm:STM1654 C32 tRNA thiolase YP_004115904.1 KEGG: esa:ESA_01673 hypothetical protein YP_004115905.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: eta:ETA_16530 zinc transporter YP_004115906.1 PFAM: extracellular solute-binding protein family 5; KEGG: eta:ETA_16480 periplasmic murein peptide-binding protein YP_004115907.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: cko:CKO_01401 murein peptide amidase A YP_004115908.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: cro:ROD_16771 putative mandelate racemase/muconate lactonizing family protein YP_004115909.1 PFAM: Redoxin domain protein; KEGG: dze:Dd1591_1768 redoxin domain protein YP_004115910.1 KEGG: eta:ETA_16450 DNA-binding transcriptional regulator TyrR; PFAM: sigma-54 factor interaction domain-containing protein; amino acid-binding ACT domain protein; SMART: AAA ATPase; PAS domain containing protein YP_004115912.1 PFAM: conserved hypothetical protein; KEGG: eta:ETA_16440 hypothetical protein YP_004115913.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: seh:SeHA_C1871 YcjX YP_004115914.1 KEGG: ctu:Ctu_23170 phage shock protein D; TIGRFAM: phage shock protein PspD; PFAM: shock protein PspD YP_004115915.1 KEGG: eta:ETA_16410 DNA-binding transcriptional activator PspC; TIGRFAM: phage shock protein C; PFAM: PspC domain protein YP_004115916.1 KEGG: eta:ETA_16400 phage shock protein B; TIGRFAM: phage shock protein B; PFAM: shock B family protein YP_004115917.1 KEGG: eta:ETA_16390 phage shock protein PspA; TIGRFAM: phage shock protein A; PFAM: PspA/IM30 family protein YP_004115918.1 TIGRFAM: psp operon transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; KEGG: ses:SARI_01279 phage shock protein operon transcriptional activator; SMART: AAA ATPase YP_004115919.1 PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_2629 extracellular solute-binding protein YP_004115920.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_16350 peptide transport system permease protein YP_004115921.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cro:ROD_17081 peptide ABC transporter, permease protein YP_004115922.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_2632 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004115923.1 KEGG: efe:EFER_1664 antimicrobial peptide transporter subunit ; ATP-binding component of ABC superfamily transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_004115924.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: esa:ESA_01591 enoyl-(acyl carrier protein) reductase YP_004115925.1 KEGG: eta:ETA_16310 conserved hypothetical protein YciW YP_004115926.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_16300 LysR-family transcriptional regulator YP_004115927.1 PFAM: protein of unknown function DUF1275; KEGG: oan:Oant_4821 hypothetical protein YP_004115928.1 KEGG: str:Sterm_3067 PTS system, glucose-like IIB subunint; TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004115929.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; KEGG: eta:ETA_16290 putative molybdopterin oxidoreductase; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase YP_004115930.1 SMART: Cold shock protein; TIGRFAM: exoribonuclease II; VacB and RNase II family 3'-5' exoribonuclease; KEGG: kpu:KP1_2325 exoribonuclease II; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein YP_004115931.1 PFAM: carbon starvation protein CstA; KEGG: spe:Spro_2639 carbon starvation protein CstA YP_004115932.1 PFAM: protein of unknown function DUF466; KEGG: yen:YE1980 hypothetical protein YP_004115933.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: ent:Ent638_2181 RNase II stability modulator; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_004115934.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ent:Ent638_2182 enoyl-CoA hydratase YP_004115935.1 KEGG: eta:ETA_16270 L-ribulose-5-phosphate 4-epimerase; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein YP_004115936.1 KEGG: esa:ESA_01581 hypothetical protein YP_004115937.1 KEGG: pwa:Pecwa_2639 translation initiation factor SUI1; TIGRFAM: translation initiation factor SUI1; PFAM: translation initiation factor SUI1 YP_004115938.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: eta:ETA_16210 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_004115939.1 KEGG: spe:Spro_2650 tetratricopeptide repeat protein YP_004115940.1 PFAM: protein of unknown function DUF1049; KEGG: eta:ETA_16190 conserved hypothetical protein (DUF1049) YP_004115941.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: spe:Spro_2652 phosphatidylglycerophosphatase B; SMART: phosphoesterase PA-phosphatase related YP_004115942.1 TIGRFAM: GTP cyclohydrolase II; KEGG: sbc:SbBS512_E1505 GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II YP_004115943.1 KEGG: eta:ETA_16160 aconitate hydratase; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein YP_004115944.1 manually curated; KEGG: elf:LF82_3548 hypothetical protein YP_004115945.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_16140 transcriptional regulator CysB YP_004115946.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; TIGRFAM: DNA topoisomerase I; KEGG: cro:ROD_17291 DNA topoisomerase I (omega protein); PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; DNA topoisomerase I zinc ribbon domain protein YP_004115947.1 PFAM: Protein of unknown function DUF2498; KEGG: spe:Spro_2658 hypothetical protein YP_004115948.1 PFAM: Peptidase S49 domain protein; peptidase S49; KEGG: eta:ETA_16120 putative periplasmic protease YP_004115949.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: esa:ESA_01567 short chain dehydrogenase YP_004115950.1 TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: eca:ECA2290 cob(I)yrinic acid a,c-diamide adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_004115951.1 KEGG: eta:ETA_16100 23S rRNA pseudouridylate synthase B; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004115952.1 KEGG: eta:ETA_27810 hypothetical protein YP_004115953.1 KEGG: eta:ETA_16060 hypothetical protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain YP_004115954.1 KEGG: eta:ETA_16050 protein TrpH; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_004115955.1 KEGG: eta:ETA_16040 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_004115956.1 KEGG: esa:ESA_01561 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_004115957.1 TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: eta:ETA_16020 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like YP_004115958.1 KEGG: spq:SPAB_01520 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; PFAM: Indole-3-glycerol phosphate synthase; N-(5'phosphoribosyl)anthranilate isomerase (PRAI) YP_004115959.1 KEGG: ent:Ent638_2207 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004115960.1 KEGG: esa:ESA_01558 hypothetical protein; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain YP_004115961.1 KEGG: ent:Ent638_1902 hypothetical protein YP_004115962.1 KEGG: eta:ETA_15980 putative lipoprotein; PFAM: transport-associated; SMART: Transport-associated and nodulation region YP_004115963.1 PFAM: chitin-binding domain 3 protein; KEGG: ypb:YPTS_0941 chitin-binding domain-containing protein YP_004115964.1 KEGG: esa:ESA_03516 putative periplasmic chaperone protein YP_004115965.1 PFAM: OmpW family protein; KEGG: ctu:Ctu_23630 outer membrane protein W YP_004115966.1 PFAM: protein of unknown function UPF0153; KEGG: esa:ESA_01555 hypothetical protein YP_004115967.1 PFAM: protein of unknown function UPF0259; KEGG: eta:ETA_15960 hypothetical protein YP_004115968.1 KEGG: eta:ETA_15950 intracellular septation protein A; TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A YP_004115969.1 PFAM: thioesterase superfamily protein; KEGG: eta:ETA_15940 putative acyl-CoA thioester hydrolase YP_004115970.1 KEGG: eta:ETA_15930 transport protein TonB; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein YP_004115971.1 PFAM: YCII-related; KEGG: kpe:KPK_2123 YciI-like protein YP_004115972.1 PFAM: DinI family protein; KEGG: eoi:ECO111_2390 putative DNA damage-inducible protein YP_004115973.1 KEGG: seh:SeHA_C1115 hypothetical protein YP_004115974.1 KEGG: sew:SeSA_A0665 hypothetical protein YP_004115975.1 KEGG: shi:Shel_18910 type IV secretory pathway, VirD4 component YP_004115976.1 PFAM: Protein of unknown function DUF1983; KEGG: sew:SeSA_A0663 GP29 YP_004115977.1 PFAM: lambda tail assembly I; KEGG: seg:SG1227 tail assembly protein YP_004115978.1 PFAM: NLP/P60 protein; KEGG: stm:STM1046 tail assembly protein YP_004115979.1 KEGG: sew:SeSA_A0661 phage minor tail protein L; TIGRFAM: phage minor tail protein L; PFAM: minor tail protein L YP_004115980.1 PFAM: minor tail family protein; KEGG: sew:SeSA_A0659 phage minor tail protein YP_004115981.1 KEGG: scl:sce1870 hypothetical protein YP_004115982.1 KEGG: esa:ESA_03034 hypothetical protein YP_004115983.1 KEGG: ppg:PputGB1_4152 hypothetical protein YP_004115984.1 KEGG: esa:ESA_03036 hypothetical protein YP_004115985.1 KEGG: esa:ESA_03039 hypothetical protein; PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein YP_004115986.1 KEGG: esa:ESA_03041 hypothetical protein YP_004115987.1 KEGG: sew:SeSA_A0643 hypothetical protein YP_004115988.1 KEGG: esa:ESA_03043 hypothetical protein YP_004115989.1 KEGG: hypothetical protein YP_004115990.1 KEGG: ctu:Ctu_11770 hypothetical protein YP_004115991.1 KEGG: esa:ESA_03046 hypothetical protein YP_004115992.1 KEGG: ctu:Ctu_11750 hypothetical protein YP_004115993.1 KEGG: esa:ESA_03048 hypothetical protein YP_004115994.1 KEGG: ctu:Ctu_11720 hypothetical protein YP_004115995.1 KEGG: esa:ESA_03051 hypothetical protein YP_004115996.1 PFAM: protein of unknown function DUF264; KEGG: esa:ESA_03052 hypothetical protein YP_004115997.1 PFAM: Protein of unknown function DUF2280; KEGG: ent:Ent638_0799 hypothetical protein YP_004115998.1 KEGG: ypp:YPDSF_1026 hypothetical protein YP_004115999.1 KEGG: TUBGCP6; tubulin, gamma complex associated protein 6 YP_004116000.1 KEGG: stm:STM1267 putative cytoplasmic protein YP_004116001.1 KEGG: ses:SARI_01129 hypothetical protein YP_004116002.1 KEGG: ecz:ECS88_2891 hypothetical protein YP_004116003.1 KEGG: csc:Csac_1466 replicative DNA helicase YP_004116004.1 PFAM: protein of unknown function DUF1378; KEGG: ecs:ECs4994 hypothetical protein YP_004116005.1 KEGG: sgl:SG1231 hypothetical protein YP_004116006.1 PFAM: glycoside hydrolase family 19; KEGG: kpu:KP1_2177 putative glycoside hydrolase YP_004116007.1 KEGG: eoh:ECO103_3120 putative holin; TIGRFAM: phage holin, lambda family; PFAM: Holin phage lambda YP_004116009.1 PFAM: antitermination protein; KEGG: ecd:ECDH10B_1337 prophage antitermination protein YP_004116010.1 PFAM: endodeoxyribonuclease RusA; KEGG: cko:CKO_01884 hypothetical protein YP_004116011.1 PFAM: DnaB domain protein helicase domain protein; KEGG: efe:EFER_2067 replicative DNA helicase YP_004116012.1 KEGG: sew:SeSA_A0620 GP59; TIGRFAM: phage replication protein O; PFAM: replication protein O domain protein YP_004116013.1 KEGG: bth:BT_3062 hypothetical protein YP_004116014.1 KEGG: plu:plu2920 hypothetical protein YP_004116015.1 KEGG: eoh:ECO103_2853 putative transcriptional regulator YP_004116016.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: eoh:ECO103_2854 putative phage repressor protein CI YP_004116017.1 KEGG: dac:Daci_3402 hypothetical protein YP_004116018.1 KEGG: seh:SeHA_C1115 hypothetical protein YP_004116019.1 KEGG: yen:YE2353 hypothetical protein YP_004116021.1 TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: yen:YE2355 exodeoxyribonuclease X; SMART: Exonuclease YP_004116022.1 KEGG: yen:YE2356 phage ATP/GTP-binding protein YP_004116023.1 KEGG: yen:YE2357 hypothetical protein YP_004116024.1 KEGG: cro:ROD_26251 hypothetical protein YP_004116025.1 KEGG: lpp:plpp0134 hypothetical protein YP_004116026.1 KEGG: plu:plu3064 hypothetical protein YP_004116027.1 PFAM: DNA polymerase II beta subunit; KEGG: kpe:KPK_4159 DNA polymerase III theta subunit YP_004116028.1 KEGG: ddc:Dd586_2414 hypothetical protein YP_004116029.1 KEGG: yen:YE2359 hypothetical protein YP_004116030.1 KEGG: swp:swp_4915 hypothetical protein swp_4915 YP_004116031.1 KEGG: hypothetical protein YP_004116032.1 KEGG: yps:YPTB1798 hypothetical protein; TIGRFAM: phage N-6-adenine-methyltransferase; PFAM: DNA N-6-adenine-methyltransferase YP_004116033.1 PFAM: C-5 cytosine-specific DNA methylase; KEGG: yen:YE2362 putative cytosine-specific modification methylase YP_004116034.1 KEGG: ecd:ECDH10B_1314 excisionase YP_004116035.1 PFAM: integrase family protein; KEGG: ecd:ECDH10B_1313 integrase YP_004116036.1 KEGG: eta:ETA_15910 hypothetical protein YP_004116037.1 KEGG: ent:Ent638_2295 cardiolipin synthetase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_004116038.1 PFAM: protein of unknown function DUF440; KEGG: spe:Spro_2690 dsDNA-mimic protein YP_004116039.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: eta:ETA_15880 ATP-binding protein of oligopeptide ABC transport system; SMART: AAA ATPase YP_004116040.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: cko:CKO_01323 oligopeptide transporter ATP-binding component; SMART: AAA ATPase YP_004116041.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ctu:Ctu_23790 oligopeptide transport system permease protein OppC YP_004116042.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpu:KP1_3307 oligopeptide ABC transport system permease component YP_004116043.1 PFAM: extracellular solute-binding protein family 5; KEGG: cro:ROD_17651 oligopeptide ABC transporter, substrate-binding protein YP_004116044.1 PFAM: extracellular solute-binding protein family 5; KEGG: eta:ETA_15830 periplasmic oligopeptide-binding protein YP_004116045.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: ypp:YPDSF_0955 hypothetical protein YP_004116046.1 PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: etr:ETAE_1508 aldehyde-alcohol dehydrogenase YP_004116047.1 KEGG: kpu:KP1_3312 thymidine kinase; PFAM: thymidine kinase YP_004116048.1 KEGG: spe:Spro_2706 global DNA-binding transcriptional dual regulator H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_004116049.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: esa:ESA_01535 hypothetical protein YP_004116050.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: eta:ETA_15770 UDP-glucose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_004116051.1 KEGG: eta:ETA_15760 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase YP_004116052.1 KEGG: eta:ETA_15750 response regulator of RpoS; PFAM: response regulator receiver; SMART: response regulator receiver YP_004116053.1 PFAM: Patatin; KEGG: stm:STM1754 hypothetical protein YP_004116054.1 PFAM: SEC-C motif domain protein; KEGG: eta:ETA_15740 hypothetical protein YP_004116055.1 KEGG: eta:ETA_15730 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein YP_004116056.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA4219 LysR family transcriptional regulator YP_004116057.1 KEGG: efe:EFER_1316 exonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase YP_004116058.1 PFAM: protein of unknown function DUF1496; KEGG: eta:ETA_15680 conserved hypothetical protein (DUF1496) YP_004116059.1 TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; KEGG: eta:ETA_15670 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein YP_004116060.1 KEGG: pmr:PMI1497 selenophosphate synthetase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_004116061.1 PFAM: nitroreductase; KEGG: esa:ESA_02164 hypothetical protein YP_004116062.1 KEGG: eta:ETA_15650 protease 4; TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49 YP_004116063.1 KEGG: eta:ETA_15640 cytoplasmic asparaginase I; TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase YP_004116064.1 KEGG: eta:ETA_15630 nicotinamidase/pyrazinamidase; PFAM: isochorismatase hydrolase YP_004116065.1 PFAM: protein of unknown function DUF1315; KEGG: eta:ETA_15620 hypothetical protein YP_004116066.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: eta:ETA_15610 methionine sulfoxide reductase B; PFAM: Methionine sulfoxide reductase B YP_004116067.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: cro:ROD_12731 glyceraldehyde 3-phosphate dehydrogenase A; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_004116068.1 PFAM: Aldose 1-epimerase; KEGG: eta:ETA_15580 hypothetical protein YP_004116069.1 PFAM: aldo/keto reductase; KEGG: eta:ETA_15570 putative oxidoreductase YP_004116070.1 PFAM: MltA-interacting MipA family protein; KEGG: eta:ETA_15560 MltA-interacting protein YP_004116071.1 KEGG: cro:ROD_12691 putative serine protein kinase; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein YP_004116072.1 PFAM: protein of unknown function DUF444; KEGG: ent:Ent638_1670 hypothetical protein YP_004116073.1 PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; transporter-associated region; KEGG: eta:ETA_15480 potassium/proton antiporter YP_004116074.1 PFAM: protein of unknown function DUF1480; KEGG: spe:Spro_2106 hypothetical protein YP_004116075.1 TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: eta:ETA_15470 undecaprenyl-phosphate galactosephosphotransferase; PFAM: sugar transferase YP_004116076.1 KEGG: eta:ETA_15460 putative multidrug resistance proteins; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004116077.1 TIGRFAM: alanine racemase; KEGG: eta:ETA_15450 alanine racemase, catabolic; PFAM: alanine racemase domain protein YP_004116078.1 PFAM: FAD dependent oxidoreductase; KEGG: eta:ETA_15440 D-amino acid dehydrogenase small subunit YP_004116080.1 PFAM: SpoVR family protein; KEGG: eta:ETA_15430 SpoVR family protein YP_004116081.1 TIGRFAM: fatty acid metabolism transcriptional regulator FadR; PFAM: fatty acid responsive transcription factor FadR domain protein; regulatory protein GntR HTH; KEGG: eta:ETA_15420 fatty acid metabolism regulator; SMART: regulatory protein GntR HTH YP_004116082.1 KEGG: ecm:EcSMS35_1963 sodium/proton antiporter; TIGRFAM: Na+/H+ antiporter NhaB; PFAM: Na+H+ antiporter NhaB YP_004116083.1 PFAM: Disulphide bond formation protein DsbB; KEGG: kpe:KPK_1980 disulfide bond formation protein B YP_004116084.1 PFAM: protein of unknown function UPF0153; KEGG: ctu:Ctu_24740 UPF0260 protein ESA_01462 YP_004116085.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: cro:ROD_18361 putative hydrolase YP_004116086.1 PFAM: protein of unknown function DUF709; KEGG: spe:Spro_2755 hypothetical protein YP_004116087.1 KEGG: eta:ETA_15370 septum formation inhibitor; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; Septum formation inhibitor MinC domain protein YP_004116088.1 KEGG: esa:ESA_01458 cell division inhibitor MinD; TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase YP_004116089.1 KEGG: pct:PC1_1938 cell division topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE YP_004116090.1 SMART: 3'-5' exonuclease; HRDC domain protein; TIGRFAM: ribonuclease D; KEGG: eta:ETA_15340 ribonuclease D; PFAM: 3'-5' exonuclease; HRDC domain protein YP_004116091.1 PFAM: AMP-dependent synthetase and ligase; KEGG: spe:Spro_2760 long-chain-fatty-acid--CoA ligase YP_004116092.1 KEGG: eta:ETA_15320 putative outer membrane protein; TIGRFAM: outer membrane lipoprotein, Slp family; PFAM: outer membrane lipoprotein Slp YP_004116093.1 PFAM: peptidase M22 glycoprotease; KEGG: kpe:KPK_1969 glycoprotease family protein YP_004116094.1 KEGG: eta:ETA_15300 probable ATP-dependent helicase YoaA; PFAM: type III restriction protein res subunit; SMART: helicase c2; DEAD-like helicase YP_004116095.1 PFAM: Endoribonuclease L-PSP; KEGG: eta:ETA_15290 hypothetical protein YP_004116096.1 PFAM: protein of unknown function UPF0181; KEGG: dze:Dd1591_1988 protein of unknown function UPF0181 YP_004116097.1 KEGG: eta:ETA_15270 para-aminobenzoate synthase component I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_004116098.1 PFAM: NUDIX hydrolase; KEGG: eta:ETA_15260 hypothetical protein YP_004116099.1 TIGRFAM: L-serine dehydratase 1; KEGG: esa:ESA_01439 hypothetical protein; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_004116100.1 KEGG: cko:CKO_01164 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_004116101.1 PFAM: Integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: eta:ETA_15240 putative inner membrane protein YoaE YP_004116102.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PTS system, mannose/fructose/sorbose family, IIA subunit; KEGG: efe:EFER_1259 fused mannose-specific PTS enzymes: IIA component ; IIB component; PFAM: PTS system sorbose subfamily IIB component; PTS system fructose subfamily IIA component YP_004116103.1 KEGG: ddc:Dd586_1973 PTS system, mannose/fructose/sorbose family, IIC subunit; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit YP_004116104.1 KEGG: spe:Spro_2815 mannose-specific PTS system protein IID; TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component YP_004116105.1 PFAM: protein of unknown function DUF986; KEGG: cro:ROD_18581 hypothetical protein YP_004116106.1 KEGG: spe:Spro_2820 23S rRNA methyltransferase A; PFAM: Methyltransferase type 11 YP_004116107.1 KEGG: cro:ROD_18621 cold shock-like protein CspC; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004116108.1 KEGG: eta:ETA_15200 predicted Zn-dependent hydrolases of the beta-lactamase fold YP_004116109.1 KEGG: eta:ETA_15190 conserved hypothetical protein YebO YP_004116110.1 KEGG: eta:ETA_15180 hypothetical protein YP_004116111.1 KEGG: eum:ECUMN_2121 DNA-binding transcriptional repressor KdgR; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004116112.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbc:SbBS512_E2096 transporter, major facilitator family YP_004116113.1 PFAM: HtpX domain protein; peptidase M48 Ste24p; KEGG: pct:PC1_1883 HtpX domain protein YP_004116114.1 SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: eta:ETA_15160 carboxy-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein YP_004116115.1 PFAM: Fertility inhibition FinO-like; KEGG: eta:ETA_15150 putative solute/DNA competence effector YP_004116116.1 KEGG: eta:ETA_15140 conserved hypothetical protein; PFAM: GAF domain protein; SMART: GAF domain protein YP_004116117.1 KEGG: eta:ETA_15130 inner membrane protein YebS; TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A YP_004116118.1 PFAM: Mammalian cell entry related domain protein; KEGG: eta:ETA_15120 conserved hypothetical protein YebT YP_004116119.1 TIGRFAM: RNA methylase, NOL1/NOP2/sun family; KEGG: sbc:SbBS512_E2103 rRNA (cytosine-C(5)-)-methyltransferase RsmF; PFAM: Fmu (Sun) domain protein YP_004116120.1 PFAM: metallophosphoesterase; KEGG: ctu:Ctu_25210 serine/threonine-protein phosphatase 1 YP_004116121.1 KEGG: fno:Fnod_0748 SMC domain-containing protein YP_004116122.1 KEGG: cai:Caci_2306 major facilitator superfamily MFS_1 YP_004116123.1 KEGG: ctu:Ctu_17560 hypothetical protein YP_004116124.1 KEGG: lxx:Lxx04980 hypothetical protein YP_004116125.1 KEGG: bgl:bglu_1g25280 hypothetical protein YP_004116126.1 KEGG: dal:Dalk_1197 TIR protein YP_004116127.1 KEGG: ddc:Dd586_1802 CI repressor; manually curated; PFAM: CI repressor YP_004116128.1 KEGG: pct:PC1_3155 hypothetical protein YP_004116129.1 PFAM: regulatory CII family protein; KEGG: ctu:Ctu_32520 regulatory protein CII YP_004116130.1 KEGG: ent:Ent638_1346 hypothetical protein YP_004116131.1 KEGG: sek:SSPA2417 hypothetical protein YP_004116132.1 KEGG: pct:PC1_3162 transcriptional regulator, TraR/DksA family; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; PFAM: zinc finger DksA/TraR C4-type YP_004116133.1 PFAM: protein of unknown function DUF1603; KEGG: sbp:Sbal223_4397 protein of unknown function DUF1603 YP_004116134.1 PFAM: N-6 DNA methylase; KEGG: sdn:Sden_3269 N-6 DNA methylase YP_004116135.1 KEGG: yps:YPTB1764 putative capsid portal protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein YP_004116136.1 TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: yps:YPTB1754 putative Orf27; P2 LysB homolog; control of lysis [Ente... YP_004116137.1 KEGG: pct:PC1_3182 phage virion morphogenesis protein; TIGRFAM: phage virion morphogenesis protein; PFAM: virion morphogenesis (putative tail completion) protein YP_004116138.1 KEGG: tpe:Tpen_0381 hypothetical protein YP_004116139.1 PFAM: GPW/gp25 family protein; KEGG: ctu:Ctu_32270 baseplate assembly protein W YP_004116140.1 KEGG: ses:SARI_01641 hypothetical protein YP_004116141.1 manually curated; PFAM: protein of unknown function UPF0150; helix-turn-helix domain protein; KEGG: plu:plu3491 hypothetical protein; SMART: helix-turn-helix domain protein YP_004116142.1 KEGG: hsm:HSM_1144 hypothetical protein YP_004116143.1 PFAM: Protein of unknown function DUF2511; KEGG: esa:ESA_01401 hypothetical protein YP_004116144.1 PFAM: copper resistance D domain protein; KEGG: ddc:Dd586_2180 copper resistance D domain protein YP_004116145.1 PFAM: copper resistance protein CopC; KEGG: ddc:Dd586_2181 copper resistance protein CopC YP_004116146.1 PFAM: DNA polymerase II beta subunit; KEGG: eta:ETA_15050 DNA polymerase III theta subunit YP_004116147.1 KEGG: eta:ETA_15040 exodeoxyribonuclease X; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_004116148.1 KEGG: cko:CKO_01121 protease 2; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; peptidase S9 prolyl oligopeptidase active site domain protein YP_004116149.1 PFAM: protein of unknown function DUF533; KEGG: esa:ESA_01395 hypothetical protein YP_004116150.1 TIGRFAM: phosphoribosylglycinamide formyltransferase 2; KEGG: eta:ETA_14990 phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_004116151.1 KEGG: ent:Ent638_2419 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase YP_004116152.1 KEGG: vex:VEA_001636 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; phosphocarrier, HPr family; PFAM: PTS system fructose subfamily IIA component; phosphoryl transfer system HPr; PEP-utilising protein domain protein YP_004116153.1 KEGG: ppr:PBPRB0218 dihydroxyacetone kinase ADP-binding subunit; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase YP_004116154.1 TIGRFAM: dihydroxyacetone kinase, DhaK subunit; KEGG: ppr:PBPRB0219 dihydroxyacetone kinase subunit DhaK; PFAM: Dak kinase YP_004116155.1 KEGG: bid:Bind_0379 MIP family channel protein; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein YP_004116156.1 KEGG: ppr:PBPRB0216 DNA-binding transcriptional regulator DhaR; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein YP_004116157.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: eta:ETA_14980 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_004116158.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: ctu:Ctu_25360 HTH-type transcriptional regulator HexR YP_004116159.1 TIGRFAM: pyruvate kinase; KEGG: eta:ETA_14970 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_004116160.1 PFAM: major facilitator superfamily MFS_1; KEGG: eta:ETA_14960 multidrug translocase MdfA (chloramphenicol resistance pump cmr) YP_004116161.1 KEGG: kpe:KPK_A0239 outer membrane protease; PFAM: peptidase A26 omptin YP_004116162.1 KEGG: kpn:KPN_02370 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; TIGRFAM: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; PFAM: lipid A biosynthesis acyltransferase YP_004116163.1 KEGG: cro:ROD_18971 putative peptidoglycan-binding peptidase; PFAM: Peptidase M23; Opacity-associated protein A domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_004116164.1 PFAM: periplasmic solute binding protein; KEGG: eta:ETA_14930 high-affinity zinc transporter periplasmic component YP_004116165.1 KEGG: sdy:SDY_1145 high-affinity zinc transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004116166.1 PFAM: ABC-3 protein; KEGG: eta:ETA_14910 high-affinity zinc transporter membrane component YP_004116167.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; KEGG: eta:ETA_14900 Holliday junction DNA helicase RuvB; SMART: AAA ATPase YP_004116168.1 TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; KEGG: eta:ETA_14890 Holliday junction DNA helicase RuvA; SMART: Helix-hairpin-helix DNA-binding class 1 YP_004116169.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: ctu:Ctu_25450 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_004116170.1 PFAM: protein of unknown function DUF28; KEGG: eta:ETA_14870 hypothetical protein YP_004116171.1 PFAM: NUDIX hydrolase; KEGG: eta:ETA_14860 putative dATP pyrophosphohydrolase YP_004116172.1 KEGG: esa:ESA_01376 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein YP_004116173.1 PFAM: protein of unknown function DUF72; KEGG: eta:ETA_14830 hypothetical protein YP_004116174.1 KEGG: kpu:KP1_3515 putative methyltransferase; TIGRFAM: methyltransferase; PFAM: Methyltransferase type 11 YP_004116175.1 KEGG: eta:ETA_14800 putative enzyme YecP; TIGRFAM: methyltransferase; PFAM: methyltransferase putative YP_004116176.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pct:PC1_4180 lysine exporter protein (LysE/YggA) YP_004116177.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: pct:PC1_0734 iron-containing alcohol dehydrogenase YP_004116178.1 KEGG: hypothetical protein YP_004116179.1 KEGG: hap:HAPS_1156 hypothetical protein YP_004116180.1 PFAM: CutC family protein; KEGG: eta:ETA_14780 copper homeostasis protein CutC YP_004116181.1 PFAM: aminotransferase class I and II; KEGG: eta:ETA_14770 aminotransferase, class I and II YP_004116182.1 PFAM: protein of unknown function DUF991; KEGG: ebr:ECB_01846 predicted metal-binding enzyme YP_004116184.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: eta:ETA_14750 arginyl-tRNA synthetase YP_004116185.1 PFAM: flagellar FlhE family protein; KEGG: eta:ETA_14740 flagellar protein FlhE YP_004116186.1 KEGG: eta:ETA_14730 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein YP_004116187.1 KEGG: eta:ETA_14720 flagellar biosynthesis protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter YP_004116188.1 KEGG: esa:ESA_03949 hypothetical protein YP_004116189.1 KEGG: eta:ETA_18630 OmpA family protein; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: Type IV / VI secretion system, DotU; OmpA/MotB domain protein YP_004116190.1 KEGG: eta:ETA_18640 hypothetical protein; TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein YP_004116191.1 KEGG: eta:ETA_18650 hypothetical protein; TIGRFAM: type VI secretion-associated protein, BMA_A0400 family; PFAM: Type VI secretion system-associated, BMAA0400 YP_004116192.1 TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein; KEGG: esa:ESA_03928 hypothetical protein; SMART: Forkhead-associated protein YP_004116193.1 SMART: protein phosphatase 2C domain protein; KEGG: spe:Spro_3007 protein serine/threonine phosphatase YP_004116194.1 KEGG: spe:Spro_3008 hypothetical protein YP_004116195.1 KEGG: spe:Spro_3014 serine/threonine protein kinase; PFAM: tyrosine protein kinase; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain YP_004116196.1 PFAM: ChaC family protein; KEGG: eta:ETA_18670 cation transport protein YP_004116198.1 PFAM: ChaB family protein; KEGG: ctu:Ctu_24170 cation transport regulator ChaB YP_004116199.1 KEGG: cko:CKO_01281 calcium/sodium:proton antiporter; TIGRFAM: calcium/proton exchanger; PFAM: sodium/calcium exchanger membrane region YP_004116200.1 KEGG: spe:Spro_1994 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004116201.1 KEGG: eta:ETA_18760 putative transcriptional regulator YP_004116202.1 PFAM: Invasion gene expression up-regulator SirB; KEGG: eta:ETA_18770 protein sirB2 YP_004116203.1 KEGG: esa:ESA_01499 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_004116204.1 KEGG: eta:ETA_18790 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein YP_004116205.1 KEGG: eum:ECUMN_1507 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase YP_004116206.1 KEGG: eta:ETA_18810 outer membrane lipoprotein LolB; TIGRFAM: outer membrane lipoprotein LolB; PFAM: outer membrane lipoprotein LolB YP_004116207.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: esa:ESA_01495 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_004116208.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: eta:ETA_18830 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_004116209.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: avn:Avin_39460 guanylyl cyclase; SMART: GGDEF domain containing protein YP_004116210.1 PFAM: Protein of unknown function DUF2583; KEGG: eta:ETA_18840 hypothetical protein YP_004116211.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: eta:ETA_18850 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_004116212.1 KEGG: cko:CKO_01258 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP-binding protein HSR1-related YP_004116213.1 KEGG: pfs:pQBR0101 putative transmembrane protein YP_004116214.1 PFAM: protein of unknown function UPF0174; KEGG: rce:RC1_0033 hypothetical protein YP_004116215.1 PFAM: NUDIX hydrolase; KEGG: ddc:Dd586_0858 NUDIX hydrolase YP_004116216.1 PFAM: Alkaline phosphatase; KEGG: ddc:Dd586_3951 alkaline phosphatase; SMART: Alkaline phosphatase YP_004116217.1 PFAM: PhoH family protein; KEGG: eoi:ECO111_1208 hypothetical protein YP_004116218.1 KEGG: eta:ETA_14310 sodium/proline symporter (proline permease); TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_004116219.1 KEGG: eta:ETA_14300 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase YP_004116220.1 PFAM: acyltransferase 3; KEGG: eta:ETA_14290 inner membrane protein YcfT YP_004116221.1 PFAM: acyltransferase 3; KEGG: eta:ETA_14290 inner membrane protein YcfT YP_004116222.1 KEGG: spe:Spro_2934 putative amino-acid ABC transporter ATP-binding protein YecC; PFAM: ABC transporter related; SMART: AAA ATPase YP_004116223.1 KEGG: esa:ESA_01305 hypothetical protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004116224.1 KEGG: cko:CKO_01025 cystine transporter subunit; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004116225.1 KEGG: eta:ETA_14280 D-cysteine desulfhydrase; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004116226.1 PFAM: integrase domain protein SAM domain protein; KEGG: eta:ETA_14270 flagella biosynthesis protein FliZ YP_004116227.1 KEGG: eta:ETA_14260 flagellar biosynthesis sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein YP_004116228.1 KEGG: eta:ETA_14250 hypothetical protein YP_004116229.1 KEGG: amr:AM1_2778 acetyltransferase YP_004116230.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ddc:Dd586_1546 DegT/DnrJ/EryC1/StrS aminotransferase YP_004116231.1 PFAM: glycosyl transferase family 2; KEGG: azo:azo2702 glycosyltransferase YP_004116232.1 PFAM: glycosyl transferase family 2; KEGG: dda:Dd703_1555 glycosyl transferase family 2 YP_004116233.1 PFAM: flagellin domain protein; KEGG: reh:H16_B2360 flagellin YP_004116234.1 PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; flagellin hook IN repeat protein; KEGG: ebd:ECBD_1718 flagellar hook-associated 2 domain protein YP_004116235.1 KEGG: sbc:SbBS512_E1055 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS YP_004116236.1 PFAM: flagellar export chaperone; KEGG: eck:EC55989_2147 flagellar biosynthesis protein FliT YP_004116237.1 KEGG: eta:ETA_14190 hypothetical protein YP_004116238.1 KEGG: eta:ETA_14180 hypothetical protein YP_004116239.1 PFAM: Sigma-S stabilisation anti-adaptor protein; KEGG: eta:ETA_25850 hypothetical protein YP_004116240.1 PFAM: DinI family protein; KEGG: ctu:Ctu_26810 virulence protein MsgA YP_004116241.1 KEGG: fra:Francci3_4377 L-aspartate oxidase YP_004116242.1 KEGG: kpu:KP1_2723 hypothetical protein YP_004116243.1 KEGG: eta:ETA_07760 conserved hypothetical protein YcgF; PFAM: EAL domain protein; BLUF domain protein; SMART: EAL domain protein YP_004116244.1 KEGG: sfv:SFV_0256 serotype-specific glucosyl transferase YP_004116245.1 KEGG: sfv:SFV_0256 serotype-specific glucosyl transferase YP_004116246.1 KEGG: eta:ETA_19870 flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE YP_004116247.1 KEGG: eta:ETA_19880 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein YP_004116248.1 KEGG: eta:ETA_19890 flagellar motor switch protein G; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG YP_004116249.1 PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: eta:ETA_19900 flagellar assembly protein H YP_004116250.1 TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: eta:ETA_19910 flagellum-specific ATP synthase; SMART: AAA ATPase YP_004116251.1 KEGG: eta:ETA_19920 flagellar biosynthesis protein FliJ; TIGRFAM: flagellar export protein FliJ; PFAM: flagellar FliJ protein YP_004116252.1 PFAM: flagellar hook-length control protein; KEGG: eta:ETA_19930 flagellar hook-length control protein YP_004116253.1 PFAM: flagellar basal body-associated protein FliL; KEGG: eta:ETA_19940 flagellar basal body-associated protein FliL YP_004116254.1 KEGG: ctu:Ctu_26620 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein YP_004116255.1 KEGG: eca:ECA1718 flagellar motor switch protein FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein YP_004116256.1 KEGG: eta:ETA_19970 flagellar protein; TIGRFAM: flagellar biosynthetic protein FliO; PFAM: flagellar biosynthesis protein FliO YP_004116257.1 KEGG: eta:ETA_19980 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_004116258.1 KEGG: eta:ETA_19990 flagellar protein; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3 YP_004116259.1 KEGG: eta:ETA_20000 flagellar biosynthesis protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein YP_004116260.1 KEGG: eta:ETA_20010 colanic acid capsular biosynthesis activation protein A; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_004116261.1 KEGG: cko:CKO_01456 hypothetical protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; ligand binding Tar domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; ligand binding Tar domain protein YP_004116262.1 PFAM: Dextransucrase DSRB; KEGG: ctu:Ctu_26690 protein DsrB YP_004116263.1 KEGG: kpu:KP1_3554 hypothetical protein YP_004116264.1 KEGG: eta:ETA_20040 mannosyl-3-phosphoglycerate phosphatase; TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004116265.1 KEGG: eta:ETA_20050 hypothetical protein YP_004116266.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cro:ROD_20351 cellulose synthesis regulatory protein (signal transduction protein); SMART: GGDEF domain containing protein YP_004116267.1 PFAM: Protein of unknown function DUF2158; KEGG: sdy:SDY_1049 hypothetical protein YP_004116268.1 KEGG: spe:Spro_1866 hypothetical protein YP_004116269.1 PFAM: protein of unknown function DUF808; KEGG: eta:ETA_14170 hypothetical protein YP_004116270.1 KEGG: pwa:Pecwa_1431 hypothetical protein YP_004116271.1 KEGG: eta:ETA_14150 DNA mismatch endonuclease, patch repair protein; TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr YP_004116272.1 TIGRFAM: DNA-cytosine methyltransferase; KEGG: kpe:KPK_1851 DNA cytosine methylase; PFAM: C-5 cytosine-specific DNA methylase YP_004116273.1 KEGG: eta:ETA_14120 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; ligand binding Tar domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein YP_004116274.1 KEGG: ddc:Dd586_1562 hypothetical protein YP_004116275.1 KEGG: ctu:Ctu_26780 uncharacterized protein YedJ; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004116276.1 KEGG: pag:PLES_25071 hypothetical protein YP_004116277.1 PFAM: protein of unknown function DUF980; KEGG: eoi:ECO111_2623 hypothetical protein YP_004116278.1 PFAM: Carbohydrate-selective porin OprB; KEGG: ppf:Pput_2204 carbohydrate-selective porin OprB YP_004116279.1 manually curated; KEGG: bbt:BBta_1001 hypothetical protein YP_004116280.1 TIGRFAM: 3-dehydroquinate dehydratase, type I; KEGG: abb:ABBFA_001570 3-dehydroquinate dehydratase; PFAM: dehydroquinase class I YP_004116281.1 KEGG: ppw:PputW619_3862 3-dehydroshikimate dehydratase (DHS dehydratase) (DHSase) YP_004116282.1 PFAM: protein of unknown function DUF554; KEGG: cko:CKO_04342 hypothetical protein YP_004116283.1 KEGG: hap:HAPS_0313 aromatic acid decarboxylase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_004116284.1 PFAM: Carboxylyase-related protein; KEGG: kpe:KPK_3325 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein YP_004116285.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: msm:MSMEG_5654 transcriptional regulator, LysR family protein YP_004116286.1 PFAM: protein of unknown function DUF1311; KEGG: esa:ESA_00658 hypothetical protein YP_004116287.1 KEGG: kpu:KP1_2283 putative hydroxylase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit YP_004116288.1 KEGG: kpe:KPK_3191 catecholate siderophore receptor Fiu; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004116290.1 PFAM: FAD dependent oxidoreductase; KEGG: ara:Arad_9647 oxidoreductase protein YP_004116291.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_3516 oligopeptide transport system permease protein AppC YP_004116292.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_9644 oligopeptide ABC transporter YP_004116293.1 PFAM: extracellular solute-binding protein family 5; KEGG: ara:Arad_9643 oligopeptide ABC transporter YP_004116294.1 PFAM: FAD dependent oxidoreductase; KEGG: ara:Arad_9642 D-amino acid oxidase protein YP_004116295.1 KEGG: avi:Avi_5296 transcriptional regulator MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004116296.1 KEGG: ara:Arad_9639 peptide ABC transporter; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004116297.1 KEGG: spe:Spro_3106 hypothetical protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004116298.1 KEGG: kpe:KPK_2022 hydrophobic amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004116299.1 KEGG: spe:Spro_3200 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004116300.1 PFAM: inner-membrane translocator; KEGG: kpe:KPK_2020 hydrophobic amino acid ABC transporter, permease protein YP_004116301.1 PFAM: inner-membrane translocator; KEGG: kpu:KP1_3406 ABC-type high-affinity branched-chain amino acid transport system permease component YP_004116302.1 PFAM: Extracellular ligand-binding receptor; KEGG: kpu:KP1_3407 ABC-type high-affinity branched-chain amino acid transport system periplasmic binding component YP_004116303.1 TIGRFAM: AMP nucleosidase; KEGG: dda:Dd703_1215 AMP nucleosidase; PFAM: AMP nucleoside phosphorylase-like; purine or other phosphorylase family 1 YP_004116304.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: dda:Dd703_3579 xanthine/uracil/vitamin C permease YP_004116305.1 KEGG: spe:Spro_1035 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_004116306.1 PFAM: PfkB domain protein; KEGG: spe:Spro_1034 ribokinase-like domain-containing protein YP_004116307.1 TIGRFAM: ketose-bisphosphate aldolase; KEGG: spe:Spro_1033 hypothetical protein; PFAM: ketose-bisphosphate aldolase class-II YP_004116308.1 PFAM: protein of unknown function DUF1498; KEGG: spe:Spro_1032 hypothetical protein YP_004116309.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpu:KP1_0351 putative ribose ABC transport system periplasmic ribose-binding component YP_004116311.1 PFAM: inner-membrane translocator; KEGG: spe:Spro_1030 monosaccharide-transporting ATPase YP_004116312.1 KEGG: ent:Ent638_0289 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004116313.1 KEGG: spe:Spro_1028 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver YP_004116314.1 KEGG: ddc:Dd586_2587 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004116315.1 KEGG: dda:Dd703_1321 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004116316.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate binding protein; phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: spe:Spro_1411 phosphonate ABC transporter, periplasmic phosphonate-binding protein YP_004116317.1 TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: ddc:Dd586_2590 phosphonate ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004116318.1 KEGG: dze:Dd1591_2687 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region YP_004116319.1 KEGG: eum:ECUMN_4627 carbon-phosphorus lyase complex subunit; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase YP_004116320.1 TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; KEGG: dda:Dd703_1313 phosphonate C-P lyase system protein PhnL; SMART: AAA ATPase YP_004116321.1 TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: pct:PC1_0891 phosphonate C-P lyase system protein PhnK; SMART: AAA ATPase YP_004116322.1 PFAM: phosphonate metabolism PhnJ; KEGG: ypb:YPTS_0543 phosphonate metabolism PhnJ YP_004116323.1 PFAM: phosphonate metabolism; KEGG: ddc:Dd586_2597 phosphonate metabolism YP_004116324.1 KEGG: pct:PC1_0888 phosphonate C-P lyase system protein PhnH; TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism YP_004116325.1 KEGG: ddc:Dd586_2599 phosphonate C-P lyase system protein PhnG; TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG YP_004116326.1 TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: pct:PC1_0886 phophonate C-P lyase system transcriptional regulator PhnF, GntR family; SMART: regulatory protein GntR HTH YP_004116327.1 SMART: EAL domain protein; GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: mes:Meso_3985 periplasmic sensor diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; GGDEF domain containing protein; CHASE4 domain protein YP_004116328.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mrd:Mrad2831_5502 short-chain dehydrogenase/reductase SDR YP_004116329.1 KEGG: pde:Pden_4973 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase YP_004116330.1 KEGG: mno:Mnod_8488 hydantoinase/oxoprolinase; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein YP_004116331.1 PFAM: GCN5-related N-acetyltransferase; KEGG: npu:Npun_R0931 GCN5-related N-acetyltransferase YP_004116332.1 KEGG: psp:PSPPH_5042 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type YP_004116333.1 TIGRFAM: 4-aminobutyrate aminotransferase; KEGG: pfs:PFLU4036 putative 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III YP_004116334.1 TIGRFAM: amidohydrolase; KEGG: aav:Aave_2179 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004116335.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pol:Bpro_0053 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_004116336.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ddc:Dd586_2547 GCN5-related N-acetyltransferase YP_004116337.1 PFAM: FAD dependent oxidoreductase; KEGG: dze:Dd1591_2645 FAD dependent oxidoreductase YP_004116338.1 KEGG: vap:Vapar_5637 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004116339.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1497 ABC peptide transporter, inner membrane subunit YP_004116340.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcm:Bcenmc03_6276 binding-protein-dependent transport systems inner membrane component YP_004116341.1 PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_C0786 peptide/opine/nickel ABC transporter periplasmic ligand-binding protein YP_004116342.1 PFAM: FAD dependent oxidoreductase; KEGG: bac:BamMC406_6061 FAD dependent oxidoreductase YP_004116343.1 KEGG: rhi:NGR_b06590 putative dehalogenase; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_004116344.1 PFAM: Aldehyde Dehydrogenase; KEGG: bgl:bglu_2g09460 betaine-aldehyde dehydrogenase YP_004116345.1 KEGG: mno:Mnod_3732 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004116346.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_13820 transcriptional regulator Cbl YP_004116347.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_13810 nitrogen assimilation transcriptional regulator YP_004116348.1 PFAM: inner-membrane translocator; KEGG: kpu:KP1_1424 sugar ABC transport system permease component YP_004116349.1 KEGG: kpe:KPK_4078 sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004116350.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpe:KPK_4079 sugar ABC transporter, periplasmic substrate-binding protein YP_004116351.1 KEGG: vap:Vapar_3422 hypothetical protein YP_004116352.1 PFAM: Protein of unknown function DUF2272; KEGG: acr:Acry_0162 hypothetical protein YP_004116354.1 KEGG: spq:SPAB_01131 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004116355.1 KEGG: pwa:Pecwa_0163 hypothetical protein YP_004116356.1 KEGG: ctu:Ctu_01120 hypothetical protein; TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; PAAR repeat-containing protein YP_004116357.1 PFAM: Domain of unknown function DUF1795; KEGG: esa:ESA_03904 hypothetical protein YP_004116358.1 KEGG: pwa:Pecwa_2439 type VI secretion system Vgr family protein; TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein YP_004116359.1 KEGG: pwa:Pecwa_2448 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain YP_004116360.1 TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: pwa:Pecwa_2449 type VI secretion ATPase, ClpV1 family; SMART: AAA ATPase YP_004116361.1 KEGG: pwa:Pecwa_2450 type VI secretion protein, VC_A0111 family; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305 YP_004116362.1 KEGG: pwa:Pecwa_2451 type VI secretion protein, VC_A0110 family; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879 YP_004116363.1 KEGG: pwa:Pecwa_2452 type VI secretion system lysozyme-related protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein YP_004116364.1 PFAM: virulence protein SciE type; KEGG: pwa:Pecwa_2453 virulence protein SciE type YP_004116365.1 KEGG: pwa:Pecwa_2454 hypothetical protein YP_004116366.1 SMART: protein phosphatase 2C domain protein; KEGG: pwa:Pecwa_2455 protein serine/threonine phosphatase YP_004116367.1 KEGG: pwa:Pecwa_2456 FHA domain containing protein; TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein YP_004116369.1 PFAM: protein of unknown function DUF1311; KEGG: eca:ECA2175 hypothetical protein YP_004116370.1 KEGG: ddc:Dd586_3563 hypothetical protein YP_004116371.1 KEGG: esa:ESA_03929 hypothetical protein YP_004116372.1 KEGG: esa:ESA_03930 hypothetical protein YP_004116373.1 KEGG: ctu:Ctu_00760 protein hcp1; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_004116374.1 KEGG: pwa:Pecwa_2460 type VI secretion protein, EvpB/VC_A0108 family; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877 YP_004116375.1 KEGG: pwa:Pecwa_2461 type VI secretion protein, VC_A0107 family; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein YP_004116376.1 KEGG: pwa:Pecwa_2462 type VI secretion-associated protein, ImpA family; TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein YP_004116377.1 KEGG: pwa:Pecwa_2463 type VI secretion-associated protein, BMA_A0400 family; TIGRFAM: type VI secretion-associated protein, BMA_A0400 family; PFAM: Type VI secretion system-associated, BMAA0400 YP_004116378.1 KEGG: pwa:Pecwa_2464 type VI secretion protein IcmF; TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215 YP_004116379.1 KEGG: pwa:Pecwa_2465 type IV / VI secretion system protein, DotU family; TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein; PFAM: Type IV / VI secretion system, DotU; OmpA/MotB domain protein YP_004116380.1 KEGG: pwa:Pecwa_2466 type VI secretion protein, VC_A0114 family; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876 YP_004116381.1 TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: pwa:Pecwa_2467 type VI secretion lipoprotein, VC_A0113 family YP_004116382.1 KEGG: pwa:Pecwa_2468 hypothetical protein YP_004116383.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlg:Rleg_6096 binding-protein-dependent transport systems inner membrane component YP_004116384.1 KEGG: ret:RHE_PB00159 putative amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase YP_004116385.1 PFAM: regulatory protein TetR; KEGG: eta:ETA_13890 TetR family transcriptional regulator YP_004116386.1 PFAM: D-arabinono-14-lactone oxidase; FAD linked oxidase domain protein; KEGG: eta:ETA_13880 FAD linked oxidase YP_004116387.1 PFAM: glycosyl transferase family 8; KEGG: eta:ETA_13870 hypothetical protein YP_004116388.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: spe:Spro_1442 oxidoreductase domain-containing protein YP_004116389.1 KEGG: spo15; sporulation protein Spo15 YP_004116390.1 KEGG: hypothetical protein YP_004116391.1 PFAM: Glutathione S-transferase domain; KEGG: kpe:KPK_3988 glutathione S-transferase domain protein YP_004116392.1 PFAM: Luciferase-like, subgroup; KEGG: pct:PC1_2848 luciferase-like monooxygenase YP_004116393.1 PFAM: fatty acid desaturase; KEGG: kpe:KPK_2006 fatty acid desaturase YP_004116394.1 KEGG: kpe:KPK_2007 hypothetical protein YP_004116395.1 KEGG: ent:Ent638_2081 translation elongation factor 2 (EF-2/EF-G); TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein YP_004116396.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: gdj:Gdia_1713 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_004116397.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bid:Bind_1436 LysR family transcriptional regulator YP_004116398.1 PFAM: Aldehyde Dehydrogenase; KEGG: bvi:Bcep1808_4941 succinate semialdehyde dehydrogenase YP_004116399.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: pfo:Pfl01_2806 carboxymuconolactone decarboxylase YP_004116400.1 KEGG: pna:Pnap_3909 alcohol dehydrogenase; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_004116401.1 PFAM: protein of unknown function DUF218; KEGG: dda:Dd703_1295 protein of unknown function DUF218 YP_004116402.1 KEGG: dze:Dd1591_2732 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004116403.1 PFAM: protein of unknown function DUF496; KEGG: eta:ETA_13650 hypothetical protein YP_004116404.1 KEGG: eta:ETA_13640 putative inner membrane protein YeeA YP_004116405.1 PFAM: transcription activator effector binding; KEGG: esa:ESA_01209 DNA gyrase inhibitor YP_004116406.1 KEGG: eta:ETA_13630 D-alanyl-D-alanine carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_004116407.1 PFAM: Exonuclease domain protein; Exonuclease RNase T and DNA polymerase III; KEGG: eta:ETA_13610 exonuclease I; SMART: Exonuclease YP_004116408.1 PFAM: amino acid permease-associated region; KEGG: eta:ETA_13600 putative amino acid permease YP_004116410.1 KEGG: spe:Spro_3216 glutamine synthetase catalytic region; PFAM: glutamine synthetase catalytic region YP_004116411.1 KEGG: spe:Spro_2067 gamma-glutamyl-gamma-aminobutyrate hydrolase; PFAM: peptidase C26 YP_004116412.1 KEGG: esa:ESA_02080 DNA-binding transcriptional repressor PuuR; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004116413.1 PFAM: FAD dependent oxidoreductase; KEGG: ctu:Ctu_18820 gamma-glutamylputrescine oxidoreductase YP_004116414.1 PFAM: GtrA family protein; KEGG: esa:ESA_03026 hypothetical protein YP_004116415.1 PFAM: glycosyl transferase family 2; KEGG: see:SNSL254_A0608 glycosyl transferase YP_004116416.1 KEGG: sfv:SFV_0256 serotype-specific glucosyl transferase YP_004116417.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: stm:STM2070 putative dehydratase YP_004116418.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: eta:ETA_13560 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; Histidine biosynthesis protein HisG domain YP_004116419.1 TIGRFAM: histidinol dehydrogenase; KEGG: spe:Spro_1615 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_004116420.1 KEGG: eta:ETA_13540 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_004116421.1 TIGRFAM: histidinol-phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: eta:ETA_13530 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; PFAM: imidazoleglycerol-phosphate dehydratase; Polynucleotide kinase 3 phosphatase central region YP_004116422.1 KEGG: eta:ETA_13520 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I YP_004116423.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: eta:ETA_13510 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein YP_004116424.1 KEGG: ent:Ent638_2637 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_004116425.1 KEGG: eta:ETA_13490 histidine biosynthesis bifunctional protein; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-AMP cyclohydrolase YP_004116426.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: eta:ETA_13480 hypothetical protein YP_004116427.1 KEGG: ecr:ECIAI1_3794 lipid A-core surface O-antigen ligase YP_004116428.1 PFAM: glycosyl transferase group 1; KEGG: ecg:E2348C_3876 UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransfe rase YP_004116429.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: eta:ETA_13470 ABC lysine/arginine/ornithine transporter, periplasmic ligand binding protein; SMART: extracellular solute-binding protein family 3 YP_004116430.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: eta:ETA_13460 succinylglutamate desuccinylase/aspartoacylase YP_004116431.1 KEGG: eta:ETA_13450 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding YP_004116432.1 KEGG: dda:Dd703_2683 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004116433.1 PFAM: ABC-2 type transporter; KEGG: xfa:XF2567 ABC transporter permease protein YP_004116434.1 KEGG: oan:Oant_2452 lipopolysaccharide biosynthesis protein-like protein YP_004116435.1 PFAM: glycosyl transferase family 2; KEGG: ppf:Pput_3922 glycosyl transferase family protein YP_004116436.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: tau:Tola_2040 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_004116437.1 manually curated; TIGRFAM: glucose-1-phosphate thymidylyltransferase; KEGG: ebr:ECB_01945 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase YP_004116438.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: eoj:ECO26_2951 putative dTDP-6-deoxy-L-mannose-dehydrogenase; PFAM: dTDP-4-dehydrorhamnose reductase YP_004116439.1 KEGG: eoj:ECO26_2952 putative dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004116440.1 KEGG: eta:ETA_13340 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004116441.1 PFAM: Nucleotidyl transferase; KEGG: eta:ETA_13330 UTP--glucose-1-phosphate uridylyltransferase subunit GalF YP_004116442.1 PFAM: polysaccharide biosynthesis protein; KEGG: eta:ETA_13320 exopolysaccharide biosynthesis protein YP_004116443.1 PFAM: glycosyl transferase group 1; KEGG: eta:ETA_13310 exopolysaccharide biosynthesis glycosyl transferase YP_004116444.1 PFAM: polysaccharide pyruvyl transferase; KEGG: eta:ETA_13300 putative pyruvyl transferase YP_004116445.1 PFAM: P22 tailspike protein head-binding; KEGG: eta:ETA_13290 exopolysaccharide biosynthesis protein YP_004116446.1 PFAM: glycosyl transferase group 1; KEGG: eta:ETA_13280 exopolysaccharide biosynthesis glycosyl transferase YP_004116447.1 PFAM: glycosyl transferase family 2; KEGG: eta:ETA_13270 glycosyl transferase YP_004116448.1 PFAM: glycosyl transferase family 2; KEGG: eta:ETA_13250 exopolysaccharide biosynthesis glycosyl transferase YP_004116449.1 TIGRFAM: capsular exopolysaccharide family; KEGG: eta:ETA_13240 putative tyrosine-protein kinase; PFAM: lipopolysaccharide biosynthesis protein YP_004116450.1 KEGG: eta:ETA_13230 probable protein-tyrosine-phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004116451.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: eta:ETA_13220 periplasmic protein involved in polysaccharide export YP_004116452.1 TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: eta:ETA_13210 UDP-galactose-lipid carrier transferase; PFAM: sugar transferase YP_004116453.1 PFAM: Integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: cro:ROD_21991 putative transport protein YP_004116454.1 PFAM: AsmA family protein; KEGG: eta:ETA_13190 putative assembly protein YP_004116455.1 KEGG: eta:ETA_13180 deoxycytidine triphosphate deaminase; TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase YP_004116456.1 KEGG: eta:ETA_13170 uridine kinase; TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase YP_004116457.1 KEGG: eta:ETA_13160 hypothetical protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_004116458.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; MASE1 domain protein; PAS fold-3 domain protein; PAS fold domain protein; KEGG: eta:ETA_13150 putative sensor-type protein YegE; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein YP_004116459.1 KEGG: eta:ETA_13140 putative chaperone YP_004116460.1 PFAM: Carbohydrate-selective porin OprB; KEGG: pau:PA14_34960 glucose-sensitive porin YP_004116461.1 PFAM: aldo/keto reductase; KEGG: eta:ETA_13130 probable oxidoreductase YP_004116462.1 KEGG: eta:ETA_13120 multidrug efflux system subunit MdtA; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004116463.1 PFAM: acriflavin resistance protein; KEGG: eta:ETA_13110 multidrug efflux system subunit MdtB YP_004116464.1 PFAM: acriflavin resistance protein; KEGG: ctu:Ctu_27720 multidrug resistance protein MdtC YP_004116465.1 PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_2687 multidrug efflux system protein MdtE YP_004116466.1 KEGG: eta:ETA_13080 signal transduction histidine-protein kinase BaeS; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004116467.1 KEGG: etw:ECSP_2836 DNA-binding response regulator in two-component regulatory system with BaeS; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_004116468.1 PFAM: peptidase U32; KEGG: stm:STM2136 putative protease YP_004116469.1 KEGG: eta:ETA_13050 lipid kinase; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region YP_004116470.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: spe:Spro_3564 alcohol dehydrogenase YP_004116471.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3565 major facilitator transporter YP_004116472.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: eca:ECA0920 carbohydrate oxidoreductase YP_004116473.1 KEGG: spe:Spro_3567 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004116474.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: cro:ROD_22221 fructose-bisphosphate aldolase class 1 YP_004116475.1 TIGRFAM: phosphomethylpyrimidine kinase; KEGG: eca:ECA3196 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_004116476.1 KEGG: kpe:KPK_1618 hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase YP_004116477.1 KEGG: sea:SeAg_B1453 hypothetical protein YP_004116478.1 KEGG: bpt:Bpet3484 hypothetical protein YP_004116479.1 PFAM: outer membrane porin; KEGG: yen:YE2976 hypothetical protein YP_004116480.1 KEGG: etr:ETAE_2611 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Carbohydrate-binding chitobiase/hexosaminidase-type domain protein; Beta-N-acetylhexosaminidase-like; glycoside hydrolase family 20 domain protein YP_004116481.1 KEGG: ecq:ECED1_0605 alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding; TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004116482.1 KEGG: ctu:Ctu_12410 alkyl hydroperoxide reductase subunit C; TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like YP_004116483.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eta:ETA_13020 GCN5-related N-acetyltransferase YP_004116484.1 PFAM: ATPase-like, ParA/MinD; KEGG: sdy:SDY_2182 putative ATPase YP_004116485.1 KEGG: eta:ETA_12990 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein YP_004116486.1 PFAM: protein of unknown function DUF559; KEGG: mca:MCA0550 DNA methyltransferase YP_004116487.1 PFAM: LrgA family protein; KEGG: pct:PC1_1498 LrgA family protein YP_004116488.1 PFAM: LrgB family protein; KEGG: eta:ETA_12970 hypothetical protein YP_004116489.1 TIGRFAM: cytidine deaminase; KEGG: spe:Spro_1568 cytidine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding domain protein; CMP/dCMP deaminase zinc-binding YP_004116490.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: eta:ETA_12950 malate dehydrogenase YP_004116491.1 PFAM: protein of unknown function DUF218; KEGG: eta:ETA_12940 hypothetical protein YP_004116492.1 PFAM: inner-membrane translocator; KEGG: eta:ETA_12930 beta-methylgalactoside transporter inner membrane component YP_004116493.1 KEGG: ddc:Dd586_1104 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004116494.1 KEGG: ddc:Dd586_1105 periplasmic binding protein/LacI transcriptional regulator YP_004116495.1 KEGG: dda:Dd703_1062 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004116496.1 PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: cko:CKO_00639 hypothetical protein YP_004116497.1 TIGRFAM: GTP cyclohydrolase I; KEGG: ctu:Ctu_28230 GTP cyclohydrolase 1; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_004116498.1 PFAM: protein of unknown function DUF1228; KEGG: eta:ETA_12870 probable MFS superfamily transporter YP_004116499.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_1558 LysR family transcriptional regulator YP_004116500.1 KEGG: eta:ETA_12850 alcohol dehydrogenase class III; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein YP_004116501.1 TIGRFAM: S-formylglutathione hydrolase; KEGG: eta:ETA_12840 putative esterase; PFAM: putative esterase YP_004116502.1 KEGG: eta:ETA_12820 putative ferric-enterobactin ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004116503.1 PFAM: transport system permease protein; KEGG: spe:Spro_3222 transport system permease protein YP_004116504.1 PFAM: amino acid permease-associated region; KEGG: spe:Spro_3224 lysine transporter YP_004116505.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_12790 putative DNA-binding transcriptional regulator YP_004116506.1 PFAM: Uncharacterised protein family UPF0324; KEGG: eta:ETA_12780 putative inner membrane protein YeiH YP_004116507.1 SMART: AP endonuclease family 2; TIGRFAM: apurinic endonuclease Apn1; KEGG: eta:ETA_12770 endonuclease IV; PFAM: Xylose isomerase domain protein TIM barrel YP_004116508.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; KEGG: eta:ETA_12760 fructose-specific PTS system IIBC component; PFAM: phosphotransferase system PTS fructose-specific IIB subunit; phosphotransferase system EIIC YP_004116509.1 KEGG: eta:ETA_12750 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein YP_004116510.1 KEGG: eta:ETA_12740 bifunctional fructose-specific PTS IIA/HPr protein; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphoryl transfer system HPr YP_004116511.1 KEGG: cro:ROD_22981 hypothetical protein; manually curated; PFAM: protein of unknown function UPF0153 YP_004116512.1 KEGG: dze:Dd1591_2429 elongation factor P-like protein YeiP; TIGRFAM: elongation factor P-like protein YeiP; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW domain protein YP_004116513.1 PFAM: cobalamin synthesis protein P47K; KEGG: esa:ESA_01065 hypothetical protein YP_004116514.1 KEGG: eta:ETA_12710 putative membrane-bound phosphatase; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_004116515.1 PFAM: NLP/P60 protein; KEGG: eta:ETA_12700 putative outer membrane lipoprotein YP_004116516.1 KEGG: eta:ETA_12690 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_004116517.1 PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_3246 extracellular solute-binding protein YP_004116518.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_12670 putative ABC transporter integral membrane subunit YP_004116519.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: esa:ESA_01058 hypothetical protein YP_004116520.1 KEGG: cko:CKO_00598 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004116521.1 KEGG: eta:ETA_12640 hypothetical protein YP_004116522.1 KEGG: bte:BTH_I1707 ribonuclease E YP_004116523.1 KEGG: eta:ETA_12630 bicyclomycin/multidrug efflux system; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004116524.1 KEGG: sbo:SBO_2141 16S rRNA pseudouridylate synthase A; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004116525.1 KEGG: eta:ETA_12610 putative ATP-dependent helicase; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004116526.1 PFAM: Ribosomal protein L25-like; KEGG: esa:ESA_01051 hypothetical protein YP_004116527.1 PFAM: 37kDa nucleoid-associated protein; KEGG: eta:ETA_12590 nucleoid-associated protein NdpA YP_004116528.1 PFAM: protein of unknown function DUF1414; KEGG: esa:ESA_01049 hypothetical protein YP_004116529.1 PFAM: sulfatase; KEGG: eta:ETA_12570 putative sulphatase YP_004116530.1 TIGRFAM: arsenate reductase; KEGG: dda:Dd703_3114 arsenate reductase; PFAM: arsenate reductase and related YP_004116531.1 manually curated; PFAM: regulatory protein ArsR; KEGG: ent:Ent638_4255 DNA-binding transcriptional repressor ArsR; SMART: regulatory protein ArsR YP_004116532.1 KEGG: sew:SeSA_A0716 arsenical resistance protein ArsH; TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase YP_004116533.1 PFAM: protein of unknown function DUF1680; KEGG: ecm:EcSMS35_3909 hypothetical protein YP_004116534.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: cro:ROD_42321 hypothetical protein YP_004116535.1 KEGG: cro:ROD_42331 AraC-family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain YP_004116536.1 KEGG: bpt:Bpet4211 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004116537.1 KEGG: ara:Arad_9688 ferrichrome-iron transporter; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004116538.1 KEGG: xau:Xaut_2782 periplasmic binding protein; manually curated; PFAM: periplasmic binding protein YP_004116539.1 PFAM: transport system permease protein; KEGG: ypb:YPTS_0773 iron-hydroxamate transporter permease subunit YP_004116540.1 KEGG: ent:Ent638_2015 hypothetical protein YP_004116541.1 KEGG: eta:ETA_12430 hypothetical protein YP_004116542.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: plu:plu0992 4'-phosphopantetheinyl transferase YP_004116543.1 TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; KEGG: eta:ETA_12350 multidrug transporter membrane component/ATP-binding component; SMART: AAA ATPase YP_004116544.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: eta:ETA_12340 DNA repair system specific for alkylated DNA YP_004116545.1 PFAM: ApbE family lipoprotein; KEGG: eta:ETA_12330 thiamine biosynthesis lipoprotein ApbE YP_004116548.1 PFAM: protein of unknown function DUF1348; KEGG: rlg:Rleg_1059 protein of unknown function DUF1348 YP_004116549.1 PFAM: regulatory protein TetR; KEGG: ypy:YPK_2838 TetR family transcriptional regulator YP_004116550.1 PFAM: porin Gram-negative type; KEGG: eta:ETA_12320 outer membrane protein C YP_004116552.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1399 hypothetical protein YP_004116553.1 KEGG: eta:ETA_12310 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; PFAM: ATP-binding region ATPase domain protein; Hpt domain protein; SMART: ATP-binding region ATPase domain protein YP_004116554.1 KEGG: eta:ETA_12300 transcriptional regulator RcsB; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_004116555.1 KEGG: eta:ETA_12290 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Signal transduction histidine kinase RcsC, alpha-beta loop-like; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_004116556.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: eta:ETA_12260 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_004116557.1 TIGRFAM: ubiquinone biosynthesis O-methyltransferase; KEGG: eta:ETA_12250 3-demethylubiquinone-9 3-methyltransferase; PFAM: Methyltransferase type 11 YP_004116558.1 KEGG: hypothetical protein LOC100216878 YP_004116559.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ent:Ent638_3531 autoinducer-2 (AI-2) modifying protein LsrG YP_004116560.1 KEGG: yen:YE0525 putative periplasmic solute-binding protein YP_004116561.1 KEGG: kpn:KPN_03505 putative ABC transport system permease protein; manually curated; PFAM: inner-membrane translocator YP_004116562.1 PFAM: inner-membrane translocator; KEGG: stm:STM4075 putative sugar transport protein YP_004116563.1 KEGG: yen:YE0528 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004116564.1 PFAM: putative sugar-binding domain protein; regulatory protein Crp; KEGG: plu:plu3142 LsrR DNA-binding protein YP_004116565.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: spe:Spro_1382 autoinducer-2 (AI-2) kinase YP_004116566.1 KEGG: eta:ETA_12240 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; ATP-cone domain protein YP_004116567.1 KEGG: eta:ETA_12230 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase YP_004116568.1 PFAM: ferredoxin; KEGG: eta:ETA_12220 2Fe-2S ferredoxin YfaE YP_004116569.1 KEGG: eta:ETA_12210 competence damage-inducible protein A; TIGRFAM: competence/damage-inducible protein CinA; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain YP_004116570.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: ent:Ent638_2816 hypothetical protein YP_004116571.1 PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: eta:ETA_12180 glucan biosynthesis protein D YP_004116572.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cro:ROD_26741 putative acetyltransferase YP_004116573.1 PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_1091 major facilitator transporter YP_004116574.1 KEGG: eta:ETA_12170 hypothetical protein YP_004116575.1 KEGG: eta:ETA_12160 NADH dehydrogenase subunit N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_004116576.1 KEGG: eta:ETA_12150 NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_004116577.1 KEGG: eta:ETA_12140 NADH dehydrogenase subunit L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_004116578.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: yen:YE1353 NADH dehydrogenase subunit K YP_004116579.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: eta:ETA_12120 NADH dehydrogenase subunit J YP_004116580.1 KEGG: spe:Spro_3301 NADH dehydrogenase subunit I; TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004116581.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: spe:Spro_3302 NADH dehydrogenase subunit H YP_004116582.1 KEGG: eta:ETA_12090 NADH dehydrogenase subunit G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_004116583.1 TIGRFAM: NADH-quinone oxidoreductase, F subunit; KEGG: eta:ETA_12080 NADH dehydrogenase I subunit F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YP_004116584.1 KEGG: eta:ETA_12070 NADH dehydrogenase subunit E; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_004116585.1 KEGG: eta:ETA_12060 bifunctional NADH:ubiquinone oxidoreductase subunit C/D; TIGRFAM: NADH dehydrogenase I, D subunit; NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_004116586.1 TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: ctu:Ctu_29120 NADH-quinone oxidoreductase subunit B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_004116587.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: kpu:KP1_3922 NADH dehydrogenase alpha subunit YP_004116588.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_12030 LysR-family transcriptional regulator YP_004116590.1 PFAM: aminotransferase class I and II; KEGG: kpu:KP1_3927 aspartate aminotransferase YP_004116591.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: eta:ETA_12010 hypothetical protein; SMART: metal-dependent phosphohydrolase HD region YP_004116592.1 KEGG: dze:Dd1591_1388 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004116593.1 PFAM: YfbU family protein; KEGG: cro:ROD_26961 hypothetical protein YP_004116594.1 PFAM: protein of unknown function DUF412; KEGG: spe:Spro_3315 hypothetical protein YP_004116595.1 KEGG: sbc:SbBS512_E2672 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase YP_004116596.1 KEGG: eta:ETA_11930 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; DRTGG domain protein YP_004116597.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; KEGG: eta:ETA_11920 ATP hydrolase of ABC transporter; SMART: AAA ATPase YP_004116598.1 KEGG: eta:ETA_11910 GntR-family regulatory protein; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004116599.1 KEGG: eta:ETA_11900 4-aminobutyrate aminotransferase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III YP_004116600.1 PFAM: extracellular solute-binding protein family 1; KEGG: eta:ETA_11890 putative transport system periplasmic protein YP_004116601.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_11880 putative transport system, permease protein YP_004116602.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_11870 putative ABC transporter permease YP_004116603.1 PFAM: NUDIX hydrolase; KEGG: eta:ETA_11860 NUDIX hydrolase YP_004116604.1 PFAM: Glutathione S-transferase domain; KEGG: eta:ETA_11850 putative glutathione-S-transferase YP_004116605.1 PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; KEGG: eta:ETA_11840 putative sugar nucleotide epimerase YP_004116606.1 KEGG: eta:ETA_11830 histidine/lysine/arginine/ornithine transporter subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004116607.1 KEGG: eta:ETA_11820 histidine transport system permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004116608.1 KEGG: eta:ETA_11810 histidine transport system permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004116609.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: eta:ETA_11800 histidine-binding periplasmic protein; SMART: extracellular solute-binding protein family 3 YP_004116610.1 KEGG: pwa:Pecwa_1472 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_004116611.1 KEGG: eta:ETA_30890 putative invasin; PFAM: Ig domain protein group 1 domain protein; SMART: Ig domain protein group 1 domain protein YP_004116612.1 KEGG: eta:ETA_11780 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase YP_004116613.1 PFAM: Colicin V production protein; KEGG: eta:ETA_11770 colicin V production protein YP_004116614.1 PFAM: Sporulation domain protein; KEGG: eta:ETA_11750 hypothetical protein YP_004116615.1 KEGG: eta:ETA_11740 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_004116616.1 KEGG: ctu:Ctu_29440 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase YP_004116617.1 PFAM: SNARE associated Golgi protein; KEGG: etr:ETAE_2414 integral membrane protein YP_004116618.1 TIGRFAM: tRNA pseudouridine synthase A; KEGG: efe:EFER_0845 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_004116619.1 KEGG: eta:ETA_11680 putative semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_004116620.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: efe:EFER_0843 erythronate-4-phosphate dehydrogenase YP_004116621.1 KEGG: yen:YE1306 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004116622.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eta:ETA_11660 putative DMT superfamily drug/metabolite efflux protein YP_004116623.1 KEGG: ddc:Dd586_2776 integral membrane sensor signal transduction histidine kinase; PFAM: Two-component sensor kinase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004116624.1 KEGG: ddc:Dd586_2777 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_004116625.1 PFAM: conserved hypothetical protein; KEGG: dze:Dd1591_1363 hypothetical protein YP_004116626.1 KEGG: ddc:Dd586_2779 tricarboxylic transport YP_004116627.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: dze:Dd1591_1361 protein of unknown function DUF112 transmembrane YP_004116628.1 KEGG: eta:ETA_11650 flagella biosynthesis regulator YP_004116629.1 KEGG: eta:ETA_11640 probable rhodanese-related sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004116630.1 KEGG: eta:ETA_11630 regulatory protein GntR; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004116631.1 PFAM: major facilitator superfamily MFS_1; KEGG: cko:CKO_00464 hypothetical protein YP_004116632.1 PFAM: Beta-ketoacyl synthase; KEGG: kpe:KPK_1426 3-oxoacyl-(acyl carrier protein) synthase I YP_004116633.1 KEGG: eta:ETA_11590 5-methylaminomethyl-2-thiouridine methyltransferase; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: protein of unknown function DUF752; FAD dependent oxidoreductase YP_004116634.1 PFAM: YfcL protein; KEGG: eta:ETA_11580 hypothetical protein YP_004116635.1 PFAM: protein of unknown function DUF462; KEGG: eta:ETA_11570 putative cytoplasmic protein YP_004116636.1 PFAM: protein of unknown function DUF81; KEGG: eta:ETA_11560 hypothetical protein YP_004116637.1 PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: eta:ETA_11550 penicillin-insensitive murein endopeptidase YP_004116638.1 TIGRFAM: chorismate synthase; KEGG: ddc:Dd586_2794 chorismate synthase; PFAM: chorismate synthase YP_004116639.1 KEGG: cko:CKO_00455 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_004116640.1 KEGG: cro:ROD_27431 hypothetical protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2 YP_004116641.1 manually curated; TIGRFAM: phosphohistidine phosphatase SixA; KEGG: eta:ETA_11510 phosphohistidine phosphatase; PFAM: Phosphoglycerate mutase YP_004116642.1 KEGG: spe:Spro_3378 multifunctional fatty acid oxidation complex subunit alpha; TIGRFAM: fatty acid oxidation complex, alpha subunit FadJ; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein YP_004116643.1 KEGG: eta:ETA_11490 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA C-acyltransferase FadI; acetyl-CoA acetyltransferase YP_004116644.1 PFAM: conserved hypothetical protein; KEGG: ypb:YPTS_2735 hypothetical protein YP_004116645.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: spe:Spro_3381 long-chain fatty acid outer membrane transporter YP_004116646.1 PFAM: VacJ family lipoprotein; KEGG: stm:STM2392 lipoprotein precursor YP_004116647.1 TIGRFAM: cytochrome c-type biogenesis protein CcmI; KEGG: eta:ETA_11450 putative cytochrome c-type biogenesis protein YP_004116648.1 PFAM: cytochrome C biogenesis protein; KEGG: spe:Spro_3384 cytochrome c biogenesis protein YP_004116649.1 KEGG: eta:ETA_11430 cytochrome c biogenesis protein CcmG (thiol:disulfide interchange protein DsbE); TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein YP_004116650.1 KEGG: eta:ETA_11420 putative cytochrome c-type biogenesis protein; TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein YP_004116651.1 PFAM: CcmE/CycJ protein; KEGG: yen:YE1267 cytochrome c-type biogenesis protein CcmE YP_004116652.1 manually curated; TIGRFAM: heme exporter protein CcmD; KEGG: eta:ETA_11400 putative heme exporter protein D; PFAM: Heme exporter protein D (CcmD) YP_004116653.1 KEGG: eta:ETA_11390 heme exporter protein C; TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein YP_004116654.1 KEGG: eta:ETA_11380 heme exporter protein B; TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB YP_004116655.1 TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; KEGG: eta:ETA_11370 cytochrome c biogenesis ATP-binding export protein; SMART: AAA ATPase YP_004116656.1 KEGG: kpe:KPK_1411 hypothetical protein; manually curated; PFAM: formate/nitrite transporter YP_004116657.1 KEGG: kpe:KPK_2414 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004116658.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: spe:Spro_2336 hypothetical protein YP_004116659.1 KEGG: eta:ETA_25820 hypothetical protein YP_004116660.1 KEGG: eta:ETA_11240 putative resistance protein; TIGRFAM: Oxalate/Formate Antiporter; PFAM: major facilitator superfamily MFS_1 YP_004116661.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: eta:ETA_11230 senescence marker protein-30 YP_004116662.1 KEGG: gbe:GbCGDNIH1_1860 hypothetical protein YP_004116663.1 KEGG: eta:ETA_11220 hypothetical protein YP_004116664.1 KEGG: eta:ETA_11210 hypothetical protein YP_004116665.1 PFAM: UspA domain protein; KEGG: eta:ETA_11200 universal stress family protein YP_004116666.1 KEGG: spe:Spro_1334 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004116667.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1333 major facilitator transporter YP_004116668.1 PFAM: secretion protein HlyD family protein; KEGG: spe:Spro_1332 secretion protein HlyD family protein YP_004116669.1 PFAM: aminotransferase class I and II; KEGG: eta:ETA_11190 putative aminotransferase YP_004116670.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eta:ETA_11180 GCN5-related N-acetyltransferase YP_004116671.1 KEGG: eta:ETA_11160 putative sensor protein; PFAM: histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; GAF domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004116672.1 KEGG: ddc:Dd586_2384 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver YP_004116673.1 TIGRFAM: glucokinase; KEGG: eta:ETA_11140 glucokinase; PFAM: Glucokinase YP_004116674.1 PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: eta:ETA_11130 indolepyruvate decarboxylase YP_004116675.1 PFAM: aldo/keto reductase; KEGG: esa:ESA_00850 hypothetical protein YP_004116676.1 PFAM: Protein of unknown function DUF2502; KEGG: ctu:Ctu_29990 uncharacterized protein YpeC YP_004116677.1 KEGG: eta:ETA_11110 manganese transport protein MntH; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein YP_004116678.1 KEGG: eta:ETA_11100 nucleoside permease; TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein YP_004116679.1 KEGG: pag:PLES_25721 putative lavin-dependent oxidoreductase; PFAM: Luciferase-like, subgroup YP_004116680.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: pag:PLES_25741 putative periplasmic aliphatic sulfonate-binding protein; SMART: extracellular solute-binding protein family 3 YP_004116681.1 KEGG: avn:Avin_30970 cysteine dioxygenase type I protein YP_004116682.1 KEGG: pfl:PFL_1374 rhodanese-like domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004116683.1 PFAM: formate/nitrite transporter; biotin/lipoate A/B protein ligase; KEGG: eta:ETA_11090 formate/nitrite transporter YP_004116684.1 PFAM: protein of unknown function DUF1323; KEGG: eta:ETA_11080 putative negative regulator YP_004116685.1 KEGG: eta:ETA_11070 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_004116686.1 KEGG: eca:ECA2237 hypothetical protein YP_004116687.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_11060 LysR family transcriptional regulator YP_004116688.1 PFAM: Bile acid:sodium symporter; KEGG: eta:ETA_11050 putative cytochrome oxidase YP_004116689.1 KEGG: dze:Dd1591_0802 hypothetical protein YP_004116690.1 TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; zinc-finger NAD-dependent DNA ligase C4-type; BRCT domain protein; KEGG: ctu:Ctu_30080 DNA ligase; SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein YP_004116691.1 TIGRFAM: cell division protein ZipA; PFAM: ZipA FtsZ-binding region; KEGG: eta:ETA_11020 cell division protein ZipA; SMART: ZipA FtsZ-binding region YP_004116692.1 PFAM: protein of unknown function DUF540; KEGG: eta:ETA_11010 protein CysZ homolog YP_004116693.1 KEGG: kpe:KPK_1377 cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004116694.1 KEGG: eta:ETA_10990 phosphohistidinoprotein-hexose phosphotransferase component of PTS system (HPr); TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_004116695.1 KEGG: eta:ETA_10980 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_004116696.1 KEGG: eta:ETA_10970 glucose-specific PTS system component; TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain YP_004116697.1 KEGG: eta:ETA_10960 putative two-component system sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004116698.1 KEGG: eta:ETA_10950 two-component system response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_004116699.1 KEGG: eta:ETA_10940 cysteine synthase B (O-acetylserine sulfhydrolase B); TIGRFAM: cysteine synthase B; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004116700.1 TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: eta:ETA_10930 sulfate/thiosulfate transporter subunit; SMART: AAA ATPase YP_004116701.1 KEGG: etw:ECSP_3370 sulfate/thiosulfate transporter subunit, membrane component of ABC superfamily; TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component YP_004116702.1 KEGG: eta:ETA_10910 sulfate/thiosulfate transporter subunit; TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component YP_004116703.1 KEGG: esa:ESA_00822 thiosulfate transporter subunit; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004116704.1 KEGG: kpe:KPK_1363 dyp-type peroxidase family protein; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase YP_004116705.1 PFAM: protein of unknown function DUF1131; KEGG: eta:ETA_10890 hypothetical protein YP_004116706.1 KEGG: eta:ETA_10880 conserved hypothetical protein YfeZ YP_004116707.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eta:ETA_10870 putative acetyltransferase YP_004116708.1 KEGG: eta:ETA_10860 N-acetylmuramoyl-L-alanine amidase I; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_004116709.1 KEGG: esa:ESA_00813 coproporphyrinogen III oxidase; PFAM: coproporphyrinogen III oxidase YP_004116710.1 PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: esa:ESA_00790 malic enzyme YP_004116711.1 KEGG: eta:ETA_10840 transaldolase A; TIGRFAM: transaldolase; PFAM: Transaldolase YP_004116712.1 KEGG: eta:ETA_10830 transketolase 2; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region YP_004116713.1 PFAM: beta-lactamase; KEGG: esa:ESA_02932 beta-lactam binding protein AmpH YP_004116714.1 PFAM: protein of unknown function DUF1176; KEGG: esa:ESA_00784 hypothetical protein YP_004116715.1 KEGG: Viral A-type inclusion protein repeat containing protein YP_004116716.1 PFAM: NUDIX hydrolase; KEGG: eta:ETA_10820 conserved hypothetical protein YffH YP_004116717.1 KEGG: spe:Spro_3484 cytochrome c-type protein NapC; TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family; PFAM: NapC/NirT cytochrome c domain protein YP_004116718.1 PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: stm:STM2256 citrate reductase cytochrome c-type subunit YP_004116719.1 KEGG: spe:Spro_3486 nitrate reductase catalytic subunit; TIGRFAM: periplasmic nitrate reductase, large subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; molydopterin dinucleotide-binding region YP_004116720.1 PFAM: NapD family protein; KEGG: eic:NT01EI_1216 NapD protein, putative YP_004116721.1 KEGG: vcj:VCD_000650 nitrate reductase; TIGRFAM: ferredoxin-type protein NapF; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004116722.1 PFAM: amino acid permease-associated region; KEGG: eta:ETA_10810 L-asparagine permease YP_004116723.1 PFAM: protein of unknown function DUF1471; KEGG: eta:ETA_10800 hypothetical protein YP_004116724.1 KEGG: spe:Spro_3489 nitrate/nitrite sensor protein NarQ; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein YP_004116725.1 KEGG: ypb:YPTS_2867 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004116726.1 KEGG: cko:CKO_00319 aminoglycoside/multidrug efflux system; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004116727.1 KEGG: kpe:KPK_2536 catalase/peroxidase HPI; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase YP_004116728.1 PFAM: arsenate reductase and related; KEGG: eta:ETA_10730 hypothetical protein YP_004116729.1 KEGG: eta:ETA_10720 succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004116730.1 KEGG: eta:ETA_10710 hypothetical protein YP_004116731.1 PFAM: phospholipase/Carboxylesterase; KEGG: ctu:Ctu_30680 esterase YpfH YP_004116732.1 PFAM: protein of unknown function DUF699 ATPase putative; GCN5-related N-acetyltransferase; KEGG: eta:ETA_10700 conserved hypothetical protein YpfI YP_004116733.1 PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: kpu:KP1_4060 hypothetical protein YP_004116734.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: kpu:KP1_4061 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_004116735.1 PFAM: NlpBDapX family lipoprotein; KEGG: eta:ETA_10670 lipoprotein YP_004116736.1 KEGG: eta:ETA_10660 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_004116737.1 PFAM: amino acid-binding ACT domain protein; KEGG: eta:ETA_10650 glycine cleavage system transcriptional repressor YP_004116738.1 KEGG: cro:ROD_24291 putative peroxiredoxin (bacterioferritin comigratory protein); PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_004116739.1 PFAM: protein of unknown function UPF0118; KEGG: ent:Ent638_2977 hypothetical protein YP_004116740.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: eta:ETA_10630 hypothetical protein; SMART: GGDEF domain containing protein YP_004116741.1 PFAM: metallophosphoesterase; KEGG: pfs:PFLU3573 putative cAMP phosphodiesterase YP_004116742.1 KEGG: rme:Rmet_4843 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004116743.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfs:PFLU3575 putative ABC transport system, membrane protein YP_004116744.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfs:PFLU3576 hypothetical protein YP_004116745.1 PFAM: extracellular solute-binding protein family 1; KEGG: bav:BAV3354 ABC transporter, substrate-binding protein YP_004116746.1 KEGG: pfs:PFLU3578 putative LacI-family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004116747.1 PFAM: Domain of unknown function DUF1791; KEGG: noc:Noc_2392 hypothetical protein YP_004116748.1 PFAM: Domain of unknown function DUF1791; KEGG: noc:Noc_2392 hypothetical protein YP_004116749.1 PFAM: peptidase M48 Ste24p; KEGG: eta:ETA_10620 hypothetical protein YP_004116750.1 KEGG: dda:Dd703_1068 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related YP_004116751.1 KEGG: eta:ETA_10600 DNA replication initiation factor; TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA YP_004116752.1 KEGG: esa:ESA_00764 uracil transporter; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_004116753.1 KEGG: kpu:KP1_4073 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004116754.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: eta:ETA_10560 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004116755.1 KEGG: esa:ESA_00761 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein YP_004116756.1 KEGG: rso:RS03019 hypothetical protein YP_004116757.1 KEGG: rso:RS03019 hypothetical protein YP_004116758.1 KEGG: xoo:XOO0223 hypothetical protein YP_004116759.1 TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: eta:ETA_10540 phosphate import ATP-binding protein (ABC phosphate transporter); SMART: AAA ATPase YP_004116760.1 KEGG: eta:ETA_10530 putative ABC phosphate transporter, permease subunit; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component YP_004116761.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_10520 phosphate ABC transporter permease protein YP_004116762.1 KEGG: eta:ETA_10510 polyphosphate kinase; PFAM: Polyphosphate kinase YP_004116763.1 KEGG: eta:ETA_10500 exopolyphosphatase; PFAM: Ppx/GppA phosphatase YP_004116764.1 KEGG: set:SEN1448 tellurite resistance protein TehB; TIGRFAM: tellurite resistance protein TehB; PFAM: Tellurite resistance methyltransferase, TehB, core YP_004116765.1 KEGG: eic:NT01EI_1027 hypothetical protein YP_004116766.1 KEGG: eta:ETA_10470 divalent cation transport protein; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region YP_004116767.1 KEGG: ctu:Ctu_32690 hypothetical protein YP_004116768.1 KEGG: ctu:Ctu_24340 hypothetical protein YP_004116769.1 KEGG: dze:Dd1591_1589 hypothetical protein YP_004116770.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpn:KPN_01260 transcriptional regulator LysR YP_004116771.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: aha:AHA_1984 putative transporter YP_004116772.1 KEGG: eca:ECA1579 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_004116773.1 KEGG: eta:ETA_10360 GMP synthase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; tRNA methyl transferase-like YP_004116774.1 SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: eta:ETA_10350 inosine 5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein YP_004116775.1 KEGG: eta:ETA_10340 exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type YP_004116776.1 PFAM: Peptidase M4 thermolysin; peptidase M4 thermolysin; KEGG: spe:Spro_3601 peptidase M4 thermolysin YP_004116777.1 KEGG: esa:ESA_00751 hypothetical protein YP_004116778.1 KEGG: esa:ESA_02962 hypothetical protein; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone YP_004116779.1 PFAM: protein of unknown function DUF1407; KEGG: eoj:ECO26_3557 hypothetical protein YP_004116780.1 TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: eta:ETA_10320 GTP-binding protein EngA; SMART: AAA ATPase YP_004116781.1 TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone; KEGG: eta:ETA_10310 outer membrane protein assembly complex subunit YfgL; SMART: Pyrrolo-quinoline quinone beta-propeller repeat YP_004116782.1 PFAM: Protein of unknown function DUF2133; KEGG: eta:ETA_10300 hypothetical protein YP_004116783.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: eta:ETA_10290 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_004116784.1 KEGG: eta:ETA_10280 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein YP_004116785.1 KEGG: eta:ETA_10270 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004116786.1 TIGRFAM: type IV pilus biogenesis/stability protein PilW; KEGG: eta:ETA_10260 probable fimbrial biogenesis protein YP_004116787.1 KEGG: eta:ETA_10250 hypothetical protein; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein YP_004116788.1 PFAM: nucleoside diphosphate kinase; KEGG: eta:ETA_10240 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_004116789.1 KEGG: eta:ETA_10230 3-mercaptopyruvate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004116790.1 PFAM: SseB family protein; KEGG: eta:ETA_10220 enhanced serine sensitivity protein SseB YP_004116791.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: eta:ETA_10210 aminopeptidase B YP_004116792.1 TIGRFAM: cysteine desulfurase IscS; KEGG: cko:CKO_00251 cysteine desulfurase; PFAM: aminotransferase class V YP_004116793.1 KEGG: eta:ETA_10190 DNA-binding transcriptional regulator IscR; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004116794.1 KEGG: eta:ETA_10180 tRNA/rRNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_004116795.1 PFAM: inositol monophosphatase; KEGG: eta:ETA_10170 inositol monophosphatase YP_004116796.1 PFAM: high-affinity nickel-transporter; KEGG: eta:ETA_10160 hypothetical protein YP_004116797.1 PFAM: protein of unknown function DUF1007; KEGG: ses:SARI_00325 hypothetical protein YP_004116798.1 PFAM: PRD domain protein; KEGG: ctu:Ctu_31360 stationary phase-inducible protein CsiE YP_004116799.1 PFAM: major facilitator superfamily MFS_1; KEGG: ctu:Ctu_31370 probable 3-phenylpropionic acid transporter YP_004116800.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ddr:Deide_3p00680 putative short-chain dehydrogenase YP_004116801.1 KEGG: ddr:Deide_3p00640 putative 2-dehydropantoate 2-reductase (ketopantoate reductase); PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_004116802.1 PFAM: Creatininase; KEGG: ddr:Deide_3p00630 putative creatinine amidohydrolase (creatininase) YP_004116803.1 KEGG: mes:Meso_3130 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004116804.1 PFAM: extracellular solute-binding protein family 5; KEGG: ddr:Deide_3p00570 putative dipeptide ABC transporter, periplasmic component YP_004116805.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddr:Deide_3p00580 putative dipeptide/oligopeptide/nickel ABC transporter, permease component YP_004116806.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddr:Deide_3p00590 putative dipeptide/oligopeptide/nickel ABC transporter, permease component YP_004116807.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ddr:Deide_3p00600 putative dipeptide/oligopeptide/nickel ABC transporter, ATP-binding component; SMART: AAA ATPase YP_004116808.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ddr:Deide_3p00610 putative oligopeptide ABC transporter, ATP-binding component; SMART: AAA ATPase YP_004116809.1 KEGG: pct:PC1_3044 glycine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_004116810.1 PFAM: globin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: ctu:Ctu_31420 flavohemoprotein YP_004116811.1 PFAM: nitrogen regulatory protein P-II; KEGG: dda:Dd703_2767 nitrogen regulatory protein P-II YP_004116812.1 KEGG: kpu:KP1_4133 putative 2-component transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase YP_004116813.1 KEGG: esa:ESA_00707 hypothetical protein YP_004116814.1 KEGG: eta:ETA_10080 putative 2-component sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004116817.1 TIGRFAM: phosphoribosylformylglycinamidine synthase; KEGG: eta:ETA_10070 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004116818.1 KEGG: eta:ETA_10060 putative transglycosylase; PFAM: Lytic transglycosylase catalytic; extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004116819.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: eta:ETA_10050 tRNA-specific adenosine deaminase YP_004116820.1 TIGRFAM: HAD superfamily (subfamily IF) hydrolase, YfhB; KEGG: eta:ETA_10040 hypothetical protein YP_004116821.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: eta:ETA_10020 putative DNA-binding transcriptional regulator YP_004116822.1 KEGG: etr:ETAE_3537 hypothetical protein YP_004116823.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: spe:Spro_3664 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_004116824.1 KEGG: eta:ETA_09960 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase YP_004116825.1 TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: eta:ETA_09950 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ YP_004116826.1 KEGG: ctu:Ctu_31560 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO YP_004116827.1 KEGG: eta:ETA_09930 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein YP_004116828.1 SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: eta:ETA_09920 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein YP_004116829.1 KEGG: eta:ETA_09910 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region YP_004116830.1 KEGG: kpe:KPK_1228 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein YP_004116831.1 PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: eta:ETA_09870 SoxR reducing system protein RseC YP_004116832.1 PFAM: MucB/RseB family protein; KEGG: eta:ETA_09860 periplasmic negative regulator of sigmaE YP_004116833.1 PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: stt:t0271 anti-RNA polymerase sigma factor SigE YP_004116834.1 KEGG: eta:ETA_09840 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma factor RpoE; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004116835.1 KEGG: ebr:ECB_02468 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004116836.1 PFAM: methyltransferase small; KEGG: eta:ETA_09820 putative enzyme YP_004116837.1 KEGG: kpe:KPK_1220 ATP-dependent RNA helicase SrmB; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004116838.1 PFAM: formate C-acetyltransferase glycine radical; KEGG: dda:Dd703_2795 formate C-acetyltransferase glycine radical YP_004116839.1 KEGG: eta:ETA_09790 uracil-DNA-glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily YP_004116840.1 PFAM: GrpE protein; KEGG: eta:ETA_09780 heat shock protein YP_004116841.1 PFAM: ATP-NAD/AcoX kinase; KEGG: eta:ETA_09770 probable inorganic polyphosphate/ATP-NAD kinase YP_004116842.1 KEGG: eta:ETA_09760 recombination and repair protein; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein YP_004116843.1 PFAM: SmpA/OmlA domain protein; KEGG: eta:ETA_09750 hypothetical protein YP_004116844.1 PFAM: protein of unknown function UPF0125; KEGG: cro:ROD_25671 hypothetical protein YP_004116845.1 PFAM: cyclase/dehydrase; KEGG: eta:ETA_09730 hypothetical protein YP_004116846.1 KEGG: dda:Dd703_3222 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein YP_004116847.1 PFAM: protein of unknown function DUF1508; KEGG: plu:plu2779 hypothetical protein YP_004116848.1 PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: xau:Xaut_1616 shikimate dehydrogenase substrate binding subunit YP_004116849.1 PFAM: UbiA prenyltransferase; KEGG: dar:Daro_1710 hypothetical protein YP_004116850.1 PFAM: FAD linked oxidase domain protein; KEGG: dar:Daro_1709 FAD linked oxidase, N-terminal YP_004116851.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dar:Daro_1708 short-chain dehydrogenase/reductase SDR YP_004116852.1 KEGG: rso:RSc0079 hypothetical protein YP_004116853.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: dar:Daro_1706 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase YP_004116854.1 PFAM: amine oxidase; KEGG: dar:Daro_1705 hypothetical protein YP_004116855.1 PFAM: GtrA family protein; KEGG: dar:Daro_1704 GtrA-like protein YP_004116856.1 KEGG: dar:Daro_1703 hypothetical protein YP_004116857.1 KEGG: cko:CKO_03998 hypothetical protein YP_004116858.1 PFAM: protein of unknown function DUF208; KEGG: bur:Bcep18194_C7371 hypothetical protein YP_004116859.1 PFAM: regulatory protein TetR; KEGG: ddc:Dd586_4006 transcriptional regulator, TetR family YP_004116860.1 PFAM: protein of unknown function DUF1471; KEGG: plu:plu4502 hypothetical protein YP_004116861.1 TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: ses:SARI_03870 hypothetical protein; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_004116862.1 PFAM: extracellular solute-binding protein family 5; KEGG: eta:ETA_25730 putative ABC transporter, substrate binding protein YP_004116863.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_25740 putative ABC transporter permease protein YP_004116864.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_25750 putative ABC transporter permease protein YP_004116865.1 KEGG: eta:ETA_25760 putative oligopeptide ABC transporter, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase YP_004116866.1 KEGG: eta:ETA_25770 dipeptide ABC transporter, ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004116867.1 KEGG: ddc:Dd586_2946 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004116868.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddc:Dd586_2947 binding-protein-dependent transport systems inner membrane component YP_004116869.1 KEGG: ddc:Dd586_2948 substrate-binding region of ABC-type glycine betaine transport system; PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3 YP_004116870.1 KEGG: cko:CKO_01578 hypothetical protein; PFAM: GCN5-related N-acetyltransferase YP_004116871.1 KEGG: eta:ETA_09420 hypothetical protein YP_004116872.1 PFAM: homocysteine S-methyltransferase; KEGG: pwa:Pecwa_2926 homocysteine S-methyltransferase YP_004116873.1 PFAM: amino acid permease-associated region; KEGG: pct:PC1_1534 amino acid permease-associated region YP_004116874.1 PFAM: Protein of unknown function DUF2002; KEGG: ent:Ent638_3151 hypothetical protein YP_004116875.1 PFAM: Protein of unknown function DUF2002; KEGG: cro:ROD_31371 hypothetical protein YP_004116876.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: cro:ROD_31361 hypothetical protein YP_004116877.1 KEGG: eta:ETA_09400 putative glutaredoxin; TIGRFAM: glutaredoxin-like protein NrdH; PFAM: glutaredoxin YP_004116878.1 KEGG: eta:ETA_09390 protein NrdI; TIGRFAM: NrdI protein; PFAM: NrdI family protein YP_004116879.1 KEGG: eta:ETA_09380 ribonucleoside-diphosphate reductase 2, alpha subunit; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase domain protein; Ribonucleotide reductase large subunit domain protein YP_004116880.1 KEGG: eta:ETA_09370 ribonucleoside-diphosphate reductase 2, beta subunit; PFAM: ribonucleotide reductase YP_004116881.1 TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: eta:ETA_09350 glycine betaine/L-proline transport ATP-binding protein ProV; SMART: AAA ATPase YP_004116882.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_09340 glycine betaine transporter membrane protein YP_004116883.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: eta:ETA_09330 glycine betaine transporter periplasmic subunit YP_004116884.1 PFAM: major facilitator superfamily MFS_1; KEGG: eta:ETA_09320 probable sugar transporter YP_004116885.1 KEGG: eta:ETA_09310 transcriptional repressor MprA; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004116886.1 KEGG: eta:ETA_09300 multidrug resistance secretion protein A; TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein YP_004116887.1 KEGG: eta:ETA_09290 multidrug resistance protein B; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004116888.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: eta:ETA_09280 putative methyltransferase YP_004116889.1 KEGG: ent:Ent638_3067 thioredoxin 2; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain YP_004116890.1 PFAM: DTW domain containing protein; KEGG: eta:ETA_09260 conserved hypothetical protein YfiP YP_004116891.1 KEGG: ypb:YPTS_3229 hypothetical protein YP_004116892.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: ctu:Ctu_31730 uncharacterized protein YfiQ YP_004116893.1 KEGG: eta:ETA_09240 phosphatidylserine synthase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_004116894.1 KEGG: eta:ETA_09220 alpha-ketoglutarate transporter; TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter YP_004116895.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; KEGG: eta:ETA_26420 protein disaggregation chaperone; SMART: AAA ATPase YP_004116896.1 PFAM: protein of unknown function DUF152; KEGG: spe:Spro_0885 hypothetical protein YP_004116897.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: eta:ETA_26440 23S rRNA pseudouridine synthase D; SMART: RNA-binding S4 domain protein YP_004116898.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: eta:ETA_26450 outer membrane protein assembly complex subunit YfiO YP_004116899.1 KEGG: eta:ETA_26460 ribosome associated factor, stabilizes ribosomes against dissociation; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_004116901.1 KEGG: eta:ETA_26470 bifunctional chorismate mutase/prephenate dehydratase; TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase, type II YP_004116902.1 TIGRFAM: chorismate mutase; KEGG: cro:ROD_25511 T-protein [includes: chorismate mutase; prephenate dehydrogenase]; PFAM: Chorismate mutase, type II; Prephenate dehydrogenase YP_004116903.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: esa:ESA_00653 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004116904.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eta:ETA_26500 probable ribosomal-protein-serine acetyltransferase YP_004116905.1 KEGG: kpu:KP1_4184 hypothetical protein; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 YP_004116906.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: eta:ETA_26550 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_004116907.1 KEGG: eta:ETA_26560 16S rRNA-processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein YP_004116908.1 KEGG: eta:ETA_26570 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16 YP_004116909.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: eta:ETA_26580 signal recognition particle protein; SMART: AAA ATPase YP_004116910.1 PFAM: cytochrome c assembly protein; KEGG: eta:ETA_26590 putative cytochrome c-type biogenesis protein (heme exporter protein C) YP_004116911.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: ecd:ECDH10B_2779 hypothetical protein YP_004116912.1 KEGG: eta:ETA_26610 S-ribosylhomocysteinase; PFAM: LuxS protein YP_004116913.1 KEGG: eta:ETA_26620 glutamate-cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase YP_004116914.1 manually curated; KEGG: eta:ETA_26630 hypothetical protein YP_004116915.1 KEGG: spe:Spro_0845 fructose-1-phosphatase; TIGRFAM: beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004116916.1 KEGG: dze:Dd1591_0984 carbon storage regulator, CsrA; TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator YP_004116917.1 KEGG: eta:ETA_26660 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1 YP_004116918.1 KEGG: eta:ETA_26670 regulatory protein RecX; manually curated; PFAM: regulatory protein RecX YP_004116919.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: ypy:YPK_3375 recombinase A; SMART: AAA ATPase YP_004116920.1 PFAM: CinA domain protein; KEGG: eta:ETA_26690 competence damage-inducible protein A YP_004116921.1 KEGG: dda:Dd703_3467 trans-aconitate 2-methyltransferase; PFAM: Methyltransferase type 11 YP_004116922.1 PFAM: dihydrodipicolinate synthetase; KEGG: cro:ROD_38421 putative lyase YP_004116923.1 KEGG: eta:ETA_00480 probable phosphonoacetate hydrolase; TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein YP_004116924.1 TIGRFAM: lytic murein transglycosylase B; KEGG: ent:Ent638_3179 murein hydrolase B YP_004116925.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; KEGG: eta:ETA_26940 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein YP_004116926.1 KEGG: eta:ETA_26950 RNA polymerase sigma factor RpoS; TIGRFAM: RNA polymerase sigma factor RpoS; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein YP_004116927.1 KEGG: eta:ETA_26960 lipoprotein NlpD; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_004116928.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: eta:ETA_26970 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004116929.1 KEGG: eta:ETA_26980 stationary phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_004116930.1 PFAM: tRNA pseudouridine synthase D TruD; KEGG: eta:ETA_26990 tRNA pseudouridine synthase D YP_004116931.1 KEGG: sdy:SDY_2945 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_004116932.1 KEGG: eta:ETA_27010 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_004116933.1 PFAM: Septum formation initiator; KEGG: eta:ETA_27020 cell division protein FtsB YP_004116934.1 KEGG: eta:ETA_27030 hypothetical protein YP_004116935.1 TIGRFAM: adenylylsulfate kinase; KEGG: esa:ESA_00541 adenylylsulfate kinase; PFAM: adenylylsulfate kinase YP_004116936.1 TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein; KEGG: eta:ETA_27050 sulfate adenylyltransferase subunit 1; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_004116937.1 KEGG: kpu:KP1_4384 sulfate adenylyltransferase subunit 2; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase YP_004116938.1 KEGG: eta:ETA_27070 uroporphyrin-III C-methylase, siroheme synthase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Sirohaem synthase, dimerisation domain YP_004116939.1 PFAM: peptidase M28; KEGG: spe:Spro_0815 alkaline phosphatase isozyme conversion aminopeptidase YP_004116940.1 PFAM: YCII-related; KEGG: eta:ETA_27080 hypothetical protein YP_004116941.1 KEGG: cko:CKO_04116 phosphoadenosine phosphosulfate reductase; TIGRFAM: phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase YP_004116942.1 KEGG: eta:ETA_27100 sulfite reductase subunit beta; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein YP_004116943.1 KEGG: eta:ETA_27110 sulfite reductase subunit alpha; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein YP_004116944.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: sdy:SDY_2967 putative 6-pyruvoyl tetrahydrobiopterin synthase YP_004116945.1 KEGG: kpe:KPK_2504 inorganic diphosphatase; PFAM: Inorganic pyrophosphatase YP_004116946.1 PFAM: Radical SAM domain protein; KEGG: eta:ETA_27180 hypothetical protein YP_004116947.1 TIGRFAM: enolase; KEGG: ctu:Ctu_33400 enolase; PFAM: Enolase-like YP_004116948.1 TIGRFAM: CTP synthase; KEGG: eta:ETA_27210 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_004116949.1 KEGG: kpu:KP1_4397 hypothetical protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase YP_004116950.1 TIGRFAM: RelA/SpoT family protein; KEGG: eta:ETA_27230 GDP/GTP pyrophosphokinase; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein YP_004116951.1 KEGG: eta:ETA_27240 23S rRNA 5-methyluridine methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase YP_004116952.1 KEGG: eta:ETA_27250 hybrid sensory histidine kinase BarA; PFAM: Protein of unknown function DUF2222; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; Hpt domain protein YP_004116953.1 TIGRFAM: glycerate kinase; KEGG: pct:PC1_3392 glycerate kinase; PFAM: glycerate kinase YP_004116954.1 TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: sbc:SbBS512_E3233 tartronate semialdehyde reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_004116955.1 TIGRFAM: 2-dehydro-3-deoxyglucarate aldolase; KEGG: ddc:Dd586_3333 2-dehydro-3-deoxyglucarate aldolase; PFAM: HpcH/HpaI aldolase YP_004116956.1 TIGRFAM: glucarate dehydratase; KEGG: eum:ECUMN_3116 (D)-glucarate dehydratase 1; PFAM: Mandelate racemase/muconate lactonizing protein YP_004116957.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ent:Ent638_3241 D-glucarate dehydratase YP_004116958.1 KEGG: ent:Ent638_3242 D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1 YP_004116959.1 TIGRFAM: galactarate dehydratase; KEGG: eca:ECA3578 D-galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein YP_004116960.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: spe:Spro_3795 flavodoxin YP_004116961.1 PFAM: pseudouridine synthase; KEGG: ent:Ent638_3244 tRNA pseudouridine synthase C YP_004116962.1 PFAM: protein of unknown function DUF446; KEGG: esa:ESA_00514 hypothetical protein YP_004116963.1 PFAM: Syd family protein; KEGG: eta:ETA_27300 SecY interacting protein Syd YP_004116964.1 TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: eta:ETA_27310 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_004116965.1 PFAM: conserved hypothetical protein; KEGG: eta:ETA_27320 putative nucleotide binding protein YP_004116966.1 KEGG: ctu:Ctu_33560 uncharacterized exonuclease xni; PFAM: 5'-3' exonuclease, SAM-fold domain; 5'-3' exonuclease, N-terminal resolvase-like domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2 YP_004116967.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: eta:ETA_27340 putative RNA 2'-O-ribose methyltransferase YP_004116968.1 PFAM: protein of unknown function DUF423; KEGG: eta:ETA_27350 hypothetical protein YP_004116969.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: efe:EFER_0259 DNA-binding transcriptional activator GcvA YP_004116970.1 PFAM: protein of unknown function DUF903; KEGG: eta:ETA_27370 putative lipoprotein YgdI YP_004116971.1 PFAM: aminotransferase class V; KEGG: eta:ETA_27380 cysteine sulfinate desulfinase YP_004116972.1 KEGG: eta:ETA_27390 SufE-like protein YgdK; TIGRFAM: cysteine desulfurase, sulfur acceptor subunit CsdE; PFAM: Fe-S metabolism associated SufE YP_004116973.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: eta:ETA_27400 putative enzyme YgdL YP_004116974.1 PFAM: MltA domain protein; 3D domain protein; KEGG: eta:ETA_27410 murein transglycosylase A YP_004116975.1 KEGG: eta:ETA_27420 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_004116976.1 KEGG: eta:ETA_27430 N-acetylglutamate synthase; TIGRFAM: amino-acid N-acetyltransferase; PFAM: aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase YP_004116977.1 TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: eta:ETA_27450 exonuclease V subunit alpha; SMART: AAA ATPase YP_004116978.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; KEGG: eta:ETA_27460 exonuclease V subunit beta; PFAM: UvrD/REP helicase YP_004116979.1 KEGG: eta:ETA_27470 protease 3 precursor (pitrilysin); PFAM: peptidase M16 domain protein YP_004116980.1 TIGRFAM: exodeoxyribonuclease V, gamma subunit; KEGG: eta:ETA_27530 exonuclease V subunit gamma; PFAM: Exodeoxyribonuclease V RecC subunit YP_004116981.1 manually curated; KEGG: eta:ETA_27540 putative prepilin peptidase dependent protein C YP_004116982.1 KEGG: eta:ETA_27560 prepilin peptidase dependent protein B YP_004116983.1 KEGG: eta:ETA_27570 putative prepilin peptidase dependent protein YP_004116984.1 TIGRFAM: thymidylate synthase; KEGG: eta:ETA_27590 thymidylate synthase; PFAM: thymidylate synthase YP_004116985.1 KEGG: eta:ETA_27600 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_004116986.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; GAF domain protein; PEP-utilising protein mobile region; KEGG: eta:ETA_27610 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; SMART: GAF domain protein YP_004116987.1 PFAM: NUDIX hydrolase; KEGG: eta:ETA_27620 dinucleoside polyphosphate hydrolase YP_004116988.1 KEGG: ect:ECIAI39_3250 hypothetical protein YP_004116989.1 KEGG: yen:YE3322 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair endonuclease mutH; PFAM: DNA mismatch repair protein MutH, conserved region YP_004116990.1 PFAM: Integral membrane protein TerC; KEGG: eta:ETA_27640 integral membrane protein, TerC family YP_004116991.1 PFAM: protein of unknown function DUF903; KEGG: eta:ETA_27650 putative lipoprotein YP_004116992.1 PFAM: aldo/keto reductase; KEGG: eta:ETA_27660 putative aldo-keto reductase YP_004116993.1 PFAM: major facilitator superfamily MFS_1; KEGG: cko:CKO_04207 lysophospholipid transporter LplT YP_004116994.1 KEGG: eta:ETA_27680 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004116995.1 KEGG: eta:ETA_27710 RND efflux system, outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004116996.1 PFAM: acriflavin resistance protein; KEGG: eta:ETA_27720 multidrug resistance protein YP_004116997.1 PFAM: acriflavin resistance protein; KEGG: eta:ETA_27730 multidrug resistance protein YP_004116998.1 KEGG: eta:ETA_27740 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004116999.1 KEGG: bpt:Bpet3026 outer membrane efflux protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004117000.1 KEGG: pau:PA14_05540 RND multidrug efflux transporter MexB; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004117001.1 KEGG: psb:Psyr_4007 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004117002.1 KEGG: ecq:ECED1_2644 conserved hypothetical protein; putative repressor YP_004117003.1 KEGG: eta:ETA_27750 peptidoglycan synthetase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_004117004.1 KEGG: eta:ETA_27760 biotin sulfoxide reductase; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase YP_004117005.1 manually curated; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; KEGG: eta:ETA_27770 DNA-binding transcriptional regulator GalR; SMART: regulatory protein LacI YP_004117006.1 KEGG: pct:PC1_3039 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004117007.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3833 GCN5-related N-acetyltransferase YP_004117008.1 KEGG: ctu:Ctu_33890 Uxu operon regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004117009.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: ddc:Dd586_3406 phosphotransferase system lactose/cellobiose-specific IIB subunit YP_004117010.1 PFAM: glycoside hydrolase family 1; KEGG: ent:Ent638_3281 glycoside hydrolase family protein YP_004117011.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: ctu:Ctu_33920 hypothetical protein; PFAM: phosphotransferase system EIIC YP_004117012.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: dze:Dd1591_0735 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit YP_004117013.1 KEGG: eta:ETA_27780 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004117014.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_27790 DNA-binding transcriptional regulator LysR YP_004117015.1 PFAM: major facilitator superfamily MFS_1; KEGG: eta:ETA_27800 putative MFS family sugar antiporter YP_004117016.1 KEGG: eta:ETA_27810 hypothetical protein YP_004117017.1 PFAM: Domain of unknown function DUF1989; KEGG: bxe:Bxe_B2652 hypothetical protein YP_004117018.1 KEGG: bxe:Bxe_B2654 polar amino acid ABC transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004117019.1 KEGG: bxe:Bxe_C1327 polar amino acid ABC transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004117020.1 PFAM: Domain of unknown function DUF1989; KEGG: bxe:Bxe_C1328 hypothetical protein YP_004117021.1 PFAM: Domain of unknown function DUF1989; KEGG: bxe:Bxe_C1329 hypothetical protein YP_004117022.1 KEGG: bxe:Bxe_C1330 polar amino acid ABC transporter periplasmic ligand-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004117023.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bxe:Bxe_C1331 RpiR family transcriptional regulator YP_004117024.1 KEGG: dze:Dd1591_3422 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_004117025.1 manually curated; KEGG: cro:ROD_49421 peptide chain release factor 2 (RF-2) YP_004117026.1 KEGG: ypi:YpsIP31758_0881 ssDNA exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1 YP_004117027.1 PFAM: Disulphide bond isomerase, DsbC/G-like; KEGG: eta:ETA_27860 thiol:disulfide interchange protein DsbC YP_004117028.1 KEGG: yen:YE3380 site-specific tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_004117029.1 KEGG: eta:ETA_27890 flavodoxin FldB; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase YP_004117030.1 KEGG: ebr:ECB_02728 hypothetical protein YP_004117031.1 PFAM: protein of unknown function DUF339; KEGG: kpu:KP1_4613 hypothetical protein YP_004117032.1 KEGG: eta:ETA_27920 putative global regulator; TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase) YP_004117033.1 KEGG: cko:CKO_04262 hypothetical protein; TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein YP_004117034.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ctu:Ctu_34510 uncharacterized oxidoreductase YgfF YP_004117035.1 KEGG: eta:ETA_27960 glycine dehydrogenase; TIGRFAM: glycine dehydrogenase; PFAM: Glycine cleavage system P-protein-like YP_004117036.1 KEGG: stm:STM3054 glycine cleavage system protein H; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein YP_004117037.1 KEGG: ctu:Ctu_34540 aminomethyltransferase; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel YP_004117038.1 KEGG: eta:ETA_28010 hypothetical protein; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase YP_004117039.1 KEGG: eta:ETA_28020 2-octaprenyl-6-methoxyphenyl hydroxylase; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase YP_004117040.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: eta:ETA_28030 proline aminopeptidase P II YP_004117041.1 manually curated; TIGRFAM: yecA family protein; KEGG: sdy:SDY_3172 hypothetical protein; PFAM: protein of unknown function UPF0149 YP_004117042.1 PFAM: protein of unknown function DUF710; KEGG: eca:ECA0461 Z-ring-associated protein YP_004117043.1 KEGG: eta:ETA_28060 putative 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_004117044.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; KEGG: ctu:Ctu_34620 D-3-phosphoglycerate dehydrogenase YP_004117045.1 TIGRFAM: ribose 5-phosphate isomerase; KEGG: cro:ROD_49161 ribose 5-phosphate isomerase A; PFAM: Ribose 5-phosphate isomerase YP_004117046.1 KEGG: eta:ETA_28090 chromosome replication initiation inhibitor protein; TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; LysR substrate-binding YP_004117047.1 PFAM: protein of unknown function DUF541; KEGG: eta:ETA_28100 hypothetical protein YP_004117048.1 PFAM: major facilitator superfamily MFS_1; KEGG: cbe:Cbei_4528 major facilitator transporter YP_004117049.1 KEGG: ent:Ent638_3354 regulatory protein, IclR; PFAM: regulatory protein IclR; SMART: regulatory protein IclR YP_004117050.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: esa:ESA_00391 hypothetical protein YP_004117051.1 KEGG: eta:ETA_28110 arginine exporter protein ArgO; TIGRFAM: L-lysine exporter; PFAM: Lysine exporter protein (LYSE/YGGA) YP_004117052.1 PFAM: MscS Mechanosensitive ion channel; Conserved TM helix repeat-containing protein; KEGG: esa:ESA_00411 mechanosensitive channel MscS YP_004117053.1 KEGG: eta:ETA_28130 fructose-bisphosphate aldolase; TIGRFAM: fructose-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_004117054.1 KEGG: eta:ETA_28140 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_004117055.1 TIGRFAM: D-erythrose-4-phosphate dehydrogenase; KEGG: eta:ETA_28150 erythrose 4-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_004117056.1 KEGG: eta:ETA_28160 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region YP_004117057.1 PFAM: peptidase M48 Ste24p; KEGG: kpu:KP1_4646 hypothetical protein YP_004117058.1 PFAM: protein of unknown function DUF937; KEGG: eta:ETA_28240 conserved hypothetical protein (DUF937) YP_004117059.1 KEGG: eta:ETA_28230 agmatinase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase YP_004117060.1 KEGG: ent:Ent638_3122 HlyD family type I secretion membrane fusion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein YP_004117061.1 TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: ent:Ent638_3121 ABC transporter related; SMART: AAA ATPase YP_004117062.1 KEGG: set:SEN2610 putative type I secretion protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein YP_004117063.1 TIGRFAM: type 1 secretion C-terminal target domain; outer membrane adhesin like proteiin; KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein YP_004117064.1 KEGG: yen:YE2225 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_004117065.1 KEGG: eta:ETA_28250 arginine decarboxylase; TIGRFAM: arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004117066.1 KEGG: tcu:Tcur_1918 hypothetical protein YP_004117067.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: eta:ETA_28260 S-adenosylmethionine synthetase (methionine adenosyltransferase); PFAM: S-adenosylmethionine synthetase YP_004117068.1 KEGG: eta:ETA_28270 galactose-proton symport (galactose transporter); TIGRFAM: sugar transporter; PFAM: General substrate transporter YP_004117069.1 manually curated; PFAM: protein of unknown function DUF335 SprT; KEGG: eta:ETA_28280 hypothetical protein; SMART: protein of unknown function SprT YP_004117070.1 KEGG: eta:ETA_28290 nuclease NucM; PFAM: Endonuclease I YP_004117071.1 PFAM: protein of unknown function DUF558; KEGG: eta:ETA_28300 conserved hypothetical protein YggJ YP_004117072.1 TIGRFAM: glutathione synthetase; KEGG: stm:STM3095 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein YP_004117073.1 PFAM: protein of unknown function DUF179; KEGG: eta:ETA_28320 hypothetical protein YP_004117074.1 KEGG: ypy:YPK_0836 Holliday junction resolvase-like protein; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold YP_004117075.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: eta:ETA_28380 putative type II secretion system protein; SMART: AAA ATPase YP_004117076.1 PFAM: alanine racemase domain protein; KEGG: eta:ETA_28390 conserved hypothetical protein YggS YP_004117077.1 PFAM: protein of unknown function YGGT; KEGG: eca:ECA3629 hypothetical protein YP_004117078.1 KEGG: spe:Spro_4034 putative deoxyribonucleotide triphosphate pyrophosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein YP_004117079.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; KEGG: eta:ETA_28420 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_004117080.1 KEGG: pwa:Pecwa_0776 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004117081.1 TIGRFAM: transketolase; KEGG: pwa:Pecwa_0777 transketolase; PFAM: Transketolase domain protein; Transketolase central region YP_004117082.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: pwa:Pecwa_0778 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_004117083.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: pwa:Pecwa_0779 phosphotransferase system lactose/cellobiose-specific IIB subunit YP_004117084.1 PFAM: putative sugar-specific permease SgaT/UlaA; KEGG: pwa:Pecwa_0780 putative sugar-specific permease SgaT/UlaA YP_004117085.1 KEGG: eta:ETA_28430 hypothetical protein YP_004117086.1 PFAM: protein of unknown function DUF469; KEGG: ecz:ECS88_3241 hypothetical protein YP_004117087.1 KEGG: eta:ETA_28450 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase YP_004117088.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; KEGG: eta:ETA_28460 adenine DNA glycosylase; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_004117089.1 PFAM: Fe(II) trafficking protein YggX; KEGG: esa:ESA_00329 hypothetical protein YP_004117090.1 PFAM: Lytic transglycosylase catalytic; KEGG: eta:ETA_28480 murein transglycosylase C YP_004117091.1 KEGG: eta:ETA_28500 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein YP_004117092.1 PFAM: FAD dependent oxidoreductase; KEGG: bms:BRA0702 D-amino acid oxidase family protein YP_004117093.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: atc:AGR_L_3508 hypothetical protein YP_004117094.1 KEGG: mlo:mll9009 transcription regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004117095.1 KEGG: bxe:Bxe_A2434 polar amino acid ABC transporter periplasmic ligand-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004117096.1 KEGG: bxe:Bxe_A2433 polar amino acid ABC transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004117097.1 KEGG: bxe:Bxe_A2432 polar amino acid ABC transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004117098.1 KEGG: bxe:Bxe_A2431 polar amino acid ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004117099.1 PFAM: FAD dependent oxidoreductase; KEGG: bpy:Bphyt_6342 FAD dependent oxidoreductase YP_004117100.1 PFAM: putative transposase YhgA family protein; KEGG: pay:PAU_00292 hypothetical protein YP_004117101.1 KEGG: pfl:PFL_2441 zinc-binding dehydrogenase family oxidoreductase; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_004117102.1 KEGG: eta:ETA_18300 hemin importer ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004117103.1 PFAM: transport system permease protein; KEGG: eta:ETA_18290 hemin transport system permease protein YP_004117104.1 PFAM: periplasmic binding protein; KEGG: eta:ETA_18280 hemin-binding periplasmic protein YP_004117105.1 PFAM: Haemin-degrading family protein; KEGG: dze:Dd1591_2835 hemin-degrading family protein YP_004117106.1 KEGG: pct:PC1_0329 TonB-dependent receptor; manually curated; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004117107.1 KEGG: kpu:KP1_4355 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: Selenoprotein W-related YP_004117108.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pca:Pcar_2176 LysR family transcriptional regulator YP_004117109.1 PFAM: protein of unknown function DUF554; KEGG: apl:APL_0733 hypothetical protein YP_004117110.1 KEGG: apl:APL_0732 aromatic acid decarboxylase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_004117111.1 PFAM: Carboxylyase-related protein; KEGG: kpe:KPK_3325 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein YP_004117112.1 PFAM: transcriptional regulator PadR family protein; KEGG: etw:ECSP_4045 predicted transcriptional regulator YP_004117113.1 PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: eta:ETA_13670 conserved hypothetical protein YqjH YP_004117114.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ooe:OEOE_0938 short-chain alcohol dehydrogenase YP_004117115.1 PFAM: protein of unknown function DUF336; KEGG: bgl:bglu_2g07510 hypothetical protein YP_004117116.1 KEGG: ent:Ent638_1111 periplasmic solute binding protein; manually curated; PFAM: periplasmic solute binding protein YP_004117117.1 KEGG: ent:Ent638_1112 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004117118.1 PFAM: ABC-3 protein; KEGG: elf:LF82_p185 SitC protein YP_004117119.1 PFAM: ABC-3 protein; KEGG: ent:Ent638_1114 ABC-3 protein YP_004117120.1 KEGG: similar to polydomain protein-like YP_004117121.1 KEGG: ctu:Ctu_06220 right origin-binding protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004117122.1 PFAM: Protein of unknown function DUF2474; KEGG: dze:Dd1591_2527 hypothetical protein YP_004117123.1 KEGG: eta:ETA_23730 ubiquinol oxidase subunit II, cyanide insensitive; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_004117124.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: cko:CKO_01227 hypothetical protein YP_004117125.1 KEGG: ent:Ent638_3409 carboxymethylenebutenolidase; PFAM: dienelactone hydrolase YP_004117126.1 PFAM: helix-turn-helix HxlR type; KEGG: ypb:YPTS_2505 HxlR family transcriptional regulator YP_004117127.1 PFAM: NmrA family protein; KEGG: yen:YE1738 hypothetical protein YP_004117129.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: avn:Avin_37930 LysR family transcriptional regulator protein YP_004117130.1 KEGG: abo:ABO_2428 glyoxalase family protein; TIGRFAM: lactoylglutathione lyase family protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004117131.1 PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: avn:Avin_37950 zinc-containing alcohol dehydrogenase YP_004117132.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: tau:Tola_1495 NADH:flavin oxidoreductase/NADH oxidase YP_004117133.1 manually curated; KEGG: efe:EFER_3502 trehalase; PFAM: glycoside hydrolase family 37 YP_004117134.1 PFAM: alpha/beta hydrolase fold; KEGG: esa:ESA_pESA3p05471 hypothetical protein YP_004117135.1 PFAM: protein of unknown function DUF894 DitE; KEGG: dac:Daci_1554 protein of unknown function DUF894 DitE YP_004117136.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebr:ECB_01918 predicted DNA-binding transcriptional regulator YP_004117137.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: kpu:KP1_1209 putative transport protein YP_004117138.1 PFAM: Amidohydrolase 3; KEGG: kpe:KPK_4338 amidohydrolase family protein YP_004117139.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: ent:Ent638_3404 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein YP_004117140.1 TIGRFAM: mannonate dehydratase; KEGG: kpe:KPK_0501 mannonate dehydratase; PFAM: Mannonate dehydratase YP_004117141.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cko:CKO_02560 hypothetical protein YP_004117142.1 KEGG: esa:ESA_00809 hypothetical protein YP_004117143.1 KEGG: kpu:KP1_1574 hypothetical protein YP_004117144.1 KEGG: rec:RHECIAT_CH0003398 probable amino acid ABC transporter, permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004117145.1 KEGG: rlg:Rleg_0672 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004117146.1 KEGG: ara:Arad_7952 amino acid ABC transporter; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004117147.1 KEGG: rle:RL1042 putative ABC transporter component; PFAM: ABC transporter related; SMART: AAA ATPase YP_004117148.1 KEGG: azc:AZC_3769 hypothetical protein; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004117149.1 KEGG: rle:RL1039 hypothetical protein YP_004117150.1 KEGG: rec:RHECIAT_CH0003402 putative oxidoreductase protein YP_004117151.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dda:Dd703_1795 transcriptional regulator, LysR family YP_004117152.1 PFAM: OmpA/MotB domain protein; KEGG: cko:CKO_03925 putative outer membrane lipoprotein YP_004117153.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: kpu:KP1_4180 hypothetical protein; SMART: GGDEF domain containing protein YP_004117154.1 KEGG: sek:SSPA2355 hypothetical protein YP_004117155.1 KEGG: bur:Bcep18194_B1500 L-proline dehydrogenase; PFAM: Proline dehydrogenase YP_004117157.1 KEGG: ses:SARI_04252 hypothetical protein YP_004117158.1 KEGG: bxe:Bxe_C0201 chitinase like protein; PFAM: Carbohydrate-binding family V/XII; SMART: Carbohydrate-binding family V/XII YP_004117159.1 PFAM: chitin-binding domain 3 protein; Carbohydrate-binding family V/XII; KEGG: mxa:MXAN_2938 chitin-binding protein YP_004117160.1 KEGG: pwa:Pecwa_1836 transcriptional regulator, LuxR family; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR YP_004117161.1 KEGG: sgr:SGR_2262 putative acetyltransferase YP_004117162.1 TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: spe:Spro_4197 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_004117163.1 KEGG: spe:Spro_4196 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165 YP_004117164.1 KEGG: dze:Dd1591_3233 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004117165.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bgl:bglu_2g16100 DNA methyltransferase YP_004117166.1 KEGG: cag:Cagg_2241 hypothetical protein YP_004117167.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; KEGG: saz:Sama_0654 putative methyl-accepting chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; PAS domain containing protein; PAC repeat-containing protein YP_004117168.1 KEGG: dda:Dd703_2934 protein serine/threonine phosphatase; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein YP_004117169.1 KEGG: dze:Dd1591_3126 hypothetical protein YP_004117170.1 PFAM: Domain of unknown function DUF1987; KEGG: bgl:bglu_1g10770 putative lipoprotein YP_004117171.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dda:Dd703_2937 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004117172.1 TIGRFAM: penicillin-binding protein 2; KEGG: stm:STM1910 putative penicillin-binding protein; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_004117173.1 KEGG: ctu:Ctu_05990 purine nucleoside phosphorylase DeoD-type; TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1 YP_004117174.1 TIGRFAM: phosphopentomutase; KEGG: eta:ETA_06680 phosphopentomutase; PFAM: Phosphopentomutase domain protein; metalloenzyme domain protein YP_004117175.1 TIGRFAM: thymidine phosphorylase; pyrimidine-nucleoside phosphorylase; KEGG: kpe:KPK_4776 thymidine phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain YP_004117176.1 TIGRFAM: deoxyribose-phosphate aldolase; KEGG: spe:Spro_0660 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_004117177.1 PFAM: TatD-related deoxyribonuclease; KEGG: ebr:ECB_04254 predicted DNase YP_004117178.1 PFAM: Patatin; KEGG: eta:ETA_06640 conserved hypothetical protein YjjU YP_004117179.1 PFAM: protein of unknown function DUF1328; KEGG: ent:Ent638_0536 hypothetical protein YP_004117180.1 KEGG: eta:ETA_06620 periplasmic protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region YP_004117181.1 KEGG: seg:SG4387 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_004117182.1 KEGG: dda:Dd703_2632 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004117183.1 PFAM: nucleoside recognition domain protein; KEGG: dda:Dd703_2631 nucleoside recognition domain protein YP_004117184.1 PFAM: nucleoside recognition domain protein; KEGG: dda:Dd703_2630 nucleoside recognition domain protein YP_004117185.1 KEGG: spe:Spro_1942 ferroxidase; PFAM: Ferritin Dps family protein YP_004117186.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: eta:ETA_30620 putative sensory box protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein YP_004117187.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_1079 binding-protein-dependent transport systems inner membrane component YP_004117188.1 PFAM: extracellular solute-binding protein family 1; KEGG: pde:Pden_1078 extracellular solute-binding protein YP_004117189.1 KEGG: pde:Pden_1077 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004117190.1 KEGG: eta:ETA_04640 putative acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004117191.1 PFAM: 20S proteasome A and B subunits; KEGG: spe:Spro_0537 20S proteasome A and B subunits YP_004117192.1 KEGG: spe:Spro_0538 transglutaminase domain-containing protein; PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein YP_004117193.1 PFAM: protein of unknown function DUF403; KEGG: spe:Spro_0539 hypothetical protein YP_004117194.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: spe:Spro_0540 hypothetical protein YP_004117195.1 KEGG: ctu:Ctu_25960 hypothetical protein YP_004117196.1 KEGG: hypothetical protein LOC100145741 YP_004117197.1 PFAM: Extracytoplasmic function sigma factor YlaC; KEGG: eta:ETA_04600 putative inner membrane protein YlaC YP_004117198.1 KEGG: eta:ETA_04590 putative bifunctional GntR-family transcriptional regulator/aminotransferase; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004117199.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; MHYT domain protein; KEGG: esa:ESA_03652 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein YP_004117200.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; MHYT domain protein; KEGG: ctu:Ctu_03240 uncharacterized signaling protein PA1727; SMART: EAL domain protein; GGDEF domain containing protein YP_004117201.1 PFAM: Spore coat U domain protein; KEGG: eta:ETA_04580 hypothetical protein CsuA (chaperone-usher pili assembly system) YP_004117202.1 PFAM: Spore coat U domain protein; KEGG: eta:ETA_04570 CsuB protein (chaperone-usher pili assembly system) YP_004117203.1 KEGG: eta:ETA_04560 CsuC protein, similar to fimbrial chaperone proteins (chaperone-usher pili assembly system) YP_004117204.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eta:ETA_04550 CsuD protein (chaperone-usher pili assembly system), similar to fimbrial usher proteins YP_004117205.1 PFAM: Spore coat U domain protein; KEGG: eta:ETA_04540 CsuE protein (chaperone-usher pili assembly system), hypothetical secreted protein YP_004117206.1 PFAM: General substrate transporter; KEGG: eta:ETA_04520 probable sugar transporter transmembrane protein YP_004117207.1 KEGG: eta:ETA_04510 biopolymer transport ExbD protein; TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR YP_004117208.1 KEGG: kpu:KP1_4704 TonB-dependent enterochelin uptake/biopolymer transport protein; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel YP_004117209.1 KEGG: pct:PC1_0344 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7 YP_004117210.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: cko:CKO_03566 hypothetical protein YP_004117211.1 KEGG: pct:PC1_0342 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_004117212.1 KEGG: eta:ETA_04490 cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004117213.1 PFAM: SNARE associated Golgi protein; KEGG: eta:ETA_04480 inner membrane protein YghB YP_004117214.1 KEGG: eta:ETA_04450 putative AraC-type regulatory protein; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004117215.1 KEGG: eta:ETA_04440 2,5-diketo-D-gluconate reductase A; PFAM: aldo/keto reductase YP_004117216.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: eta:ETA_04430 repressor protein for FtsI YP_004117217.1 SMART: phospholipid/glycerol acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; KEGG: eta:ETA_04420 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase YP_004117218.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, A subunit; KEGG: eta:ETA_04410 DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_004117219.1 KEGG: pwa:Pecwa_0336 transcriptional antiterminator, BglG; PFAM: Helix-turn-helix type 11 domain protein; M trans-acting positive regulator; PRD domain protein YP_004117220.1 KEGG: eca:ECA0342 PTS system, EIIA component; TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_004117221.1 KEGG: pwa:Pecwa_0334 PTS system, fructose-specific, IIB subunnit; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit YP_004117222.1 KEGG: pwa:Pecwa_0333 PTS system, fructose subfamily, IIC subunit; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC YP_004117223.1 TIGRFAM: ketose-bisphosphate aldolase; KEGG: eca:ECA0339 sugar-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_004117224.1 TIGRFAM: ketose-bisphosphate aldolase; KEGG: pct:PC1_0323 ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_004117225.1 PFAM: extracellular solute-binding protein family 3; KEGG: spe:Spro_4447 arogenate dehydratase; SMART: extracellular solute-binding protein family 3 YP_004117226.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: eta:ETA_04400 putative modulator of drug activity YP_004117227.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: eta:ETA_04390 conserved hypothetical protein YgiN YP_004117228.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_04380 LysR-family transcriptional regulator YP_004117229.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA topoisomerase IV, B subunit; KEGG: kpe:KPK_0678 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; DNA gyrase subunit B domain protein YP_004117230.1 PFAM: protein of unknown function UPF0227; KEGG: ent:Ent638_3444 esterase YqiA YP_004117231.1 PFAM: Calcineurin phosphoesterase domain protein; metallophosphoesterase; KEGG: eta:ETA_04350 putative Icc protein YP_004117232.1 PFAM: protein of unknown function DUF1249; KEGG: spe:Spro_4266 hypothetical protein YP_004117233.1 KEGG: ypb:YPTS_3540 ADP-ribose pyrophosphatase NudF; PFAM: NUDIX hydrolase YP_004117234.1 KEGG: eta:ETA_04320 outer membrane channel protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein YP_004117235.1 PFAM: protein of unknown function DUF1190; KEGG: cro:ROD_35831 putative lipoprotein YP_004117236.1 KEGG: eta:ETA_04300 predicted glutathionylspermidine synthase; PFAM: glutathionylspermidine synthase YP_004117237.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: eta:ETA_04290 hypothetical protein YP_004117238.1 KEGG: eta:ETA_04280 3,4-dihydroxy-2-butanone 4-phosphate synthase (DhbP synthase); TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase YP_004117239.1 PFAM: protein of unknown function DUF526; KEGG: efe:EFER_2991 hypothetical protein YP_004117240.1 KEGG: yen:YE3673 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase YP_004117241.1 KEGG: eta:ETA_04250 glutamate-ammonia-ligase adenylyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase YP_004117242.1 PFAM: adenylate cyclase; KEGG: eta:ETA_04240 hypothetical protein YP_004117243.1 SMART: SH3 domain protein; KEGG: kpu:KP1_4746 hypothetical protein YP_004117244.1 PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: eta:ETA_04220 tRNA nucleotidyl transferase YP_004117245.1 KEGG: eta:ETA_04210 undecaprenyl pyrophosphate phosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA YP_004117246.1 KEGG: spe:Spro_4295 bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase; TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase YP_004117247.1 PFAM: protein of unknown function DUF205; KEGG: ypb:YPTS_3558 putative glycerol-3-phosphate acyltransferase PlsY YP_004117248.1 TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: kpu:KP1_4763 putative O-sialoglycoprotein endopeptidase; PFAM: peptidase M22 glycoprotease YP_004117249.1 KEGG: dze:Dd1591_3487 ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_004117250.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase, DnaB-helicase binding domain; DNA primase DnaG DnaB-binding; KEGG: eta:ETA_04160 DNA primase; SMART: DNA primase DnaG DnaB-binding; zinc finger CHC2-family protein; Toprim sub domain protein YP_004117251.1 KEGG: eta:ETA_04150 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 non-essential domain protein; sigma-70 1.1 domain protein; sigma-70 region 1.2; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_004117252.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: eta:ETA_04140 G/U mismatch-specific DNA glycosylase YP_004117253.1 PFAM: regulatory protein TetR; KEGG: cak:Caul_5150 TetR family transcriptional regulator YP_004117254.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: msl:Msil_0380 short-chain dehydrogenase/reductase SDR YP_004117255.1 PFAM: BRCT domain protein; KEGG: ecz:ECS88_2808 hypothetical protein YP_004117256.1 PFAM: protein of unknown function DUF181; KEGG: cbd:CBUD_0840 hypothetical cytosolic protein YP_004117258.1 PFAM: transcriptional activator Ogr/delta; KEGG: pct:PC1_3199 transcriptional activator Ogr/delta YP_004117259.1 PFAM: late control D family protein; KEGG: ecq:ECED1_3062 late control gene D protein (GpD) YP_004117260.1 PFAM: P2 GpU family protein; KEGG: sek:SSPA2380 putative phage tail protein YP_004117261.1 KEGG: eta:ETA_05920 probable bacteriophage V tail protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; TMP repeat-containing protein YP_004117262.1 KEGG: stt:t3441 hypothetical protein; manually curated; PFAM: P2 GpE family protein YP_004117263.1 PFAM: tail E family protein; KEGG: stt:t3440 putative phage tail protein YP_004117264.1 KEGG: sed:SeD_A3030 phage major tail tube protein FII; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein YP_004117265.1 PFAM: tail sheath protein; KEGG: sbc:SbBS512_E2493 major tail sheath protein YP_004117266.1 KEGG: eum:ECUMN_0911 hypothetical protein; putative phage tail fiber assembly protein YP_004117267.1 KEGG: eta:ETA_05860 putative phage tail fiber protein YP_004117268.1 KEGG: eta:ETA_05850 putative phage tail protein; TIGRFAM: phage tail protein I; PFAM: tail protein I YP_004117269.1 PFAM: Baseplate J family protein; KEGG: eta:ETA_05840 probable phage baseplate assembly protein YP_004117270.1 PFAM: GPW/gp25 family protein; KEGG: sea:SeAg_B2853 baseplate assembly protein W YP_004117271.1 KEGG: sed:SeD_A3037 phage baseplate assembly protein V; TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V YP_004117272.1 KEGG: ctc:CTC00543 hypothetical protein YP_004117273.1 manually curated; TIGRFAM: phage virion morphogenesis protein; KEGG: ecz:ECS88_2823 putative phage tail completion protein; PFAM: virion morphogenesis (putative tail completion) protein YP_004117274.1 PFAM: P2 phage tail completion R family protein; KEGG: ecg:E2348C_0827 predicted tail protein YP_004117275.1 TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: sea:SeAg_B2859 putative regulatory protein YP_004117276.1 PFAM: glycoside hydrolase family 24; KEGG: eta:ETA_05770 putative phage lysozyme YP_004117277.1 KEGG: sbo:SBO_0764 secretory protein YP_004117278.1 PFAM: tail X family protein; KEGG: sek:SSPA2400 putative phage tail protein YP_004117279.1 PFAM: head completion protein; KEGG: stm:STM2718 head completion-like protein YP_004117280.1 PFAM: small terminase subunit; KEGG: eta:ETA_05730 putative phage terminase YP_004117281.1 KEGG: sea:SeAg_B2866 phage major capsid protein, P2 family; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2 YP_004117282.1 PFAM: capsid scaffolding; KEGG: stm:STM2721 capsid scaffold-like protein YP_004117283.1 PFAM: protein of unknown function DUF264; putative terminase ATPase subunit; KEGG: elf:LF82_p404 terminase, ATPase subunit YP_004117284.1 KEGG: sea:SeAg_B2869 phage portal protein, pbsx family; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein YP_004117285.1 KEGG: ami:Amir_6652 hypothetical protein YP_004117286.1 KEGG: pph:Ppha_1599 hypothetical protein YP_004117287.1 PFAM: protein of unknown function DUF437; KEGG: plu:plu4361 hypothetical protein YP_004117288.1 KEGG: sed:SeD_A3056 hypothetical protein YP_004117289.1 PFAM: replication gene A; KEGG: eum:ECUMN_0971 replication gene A protein from bacteriophage origin YP_004117290.1 KEGG: pct:PC1_3161 hypothetical protein YP_004117291.1 KEGG: ctu:Ctu_32480 uncharacterized 8.5 kDa protein in gpA 5'region; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; PFAM: zinc finger DksA/TraR C4-type YP_004117292.1 KEGG: ent:Ent638_3508 hypothetical protein YP_004117293.1 KEGG: kpn:KPN_04890 putative prophage protein YP_004117294.1 PFAM: regulatory CII family protein; KEGG: ctu:Ctu_32520 regulatory protein CII YP_004117295.1 KEGG: eum:ECUMN_0963 putative regulator from bacteriophage origin YP_004117296.1 PFAM: CI repressor; KEGG: ecg:E2348C_0801 predicted repressor protein YP_004117297.1 PFAM: integrase family protein; KEGG: seh:SeHA_C3507 phage integrase family protein YP_004117298.1 KEGG: ppg:PputGB1_1616 beta-lactamase domain-containing protein YP_004117299.1 PFAM: ImpA domain protein; KEGG: ses:SARI_02709 hypothetical protein YP_004117300.1 KEGG: spe:Spro_1803 gpW/GP25 family protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein YP_004117301.1 TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: kpu:KP1_2421 hypothetical protein YP_004117302.1 KEGG: spe:Spro_1801 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305 YP_004117303.1 KEGG: spe:Spro_1800 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879 YP_004117304.1 KEGG: spe:Spro_1799 ImpA domain-containing protein; TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein YP_004117305.1 PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: spe:Spro_1798 ImcF domain-containing protein YP_004117306.1 TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: esa:ESA_pESA3p05497 hypothetical protein; SMART: AAA ATPase YP_004117307.1 KEGG: pay:PAU_03833 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_004117308.1 PFAM: OmpA/MotB domain protein; KEGG: spe:Spro_1787 OmpA/MotB domain-containing protein YP_004117309.1 KEGG: kpu:KP1_2396 hypothetical protein; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: Type IV / VI secretion system, DotU YP_004117310.1 KEGG: spe:Spro_1785 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876 YP_004117311.1 KEGG: spe:Spro_1784 hypothetical protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877 YP_004117312.1 KEGG: esa:ESA_02043 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein YP_004117314.1 KEGG: spe:Spro_0382 YD repeat-containing protein; PFAM: zinc finger C2H2-type domain protein; SMART: Zinc finger, C2H2-like YP_004117315.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: spe:Spro_1367 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein YP_004117316.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cro:ROD_15211 putative signal transduction protein; SMART: GGDEF domain containing protein YP_004117317.1 PFAM: sulphate transporter; KEGG: kpu:KP1_0571 putative sulfate transporter YP_004117318.1 KEGG: eta:ETA_28930 carbonate dehydratase; PFAM: carbonic anhydrase YP_004117319.1 KEGG: spe:Spro_1456 5'-nucleotidase; TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family; PFAM: acid phosphatase (Class B) YP_004117320.1 PFAM: protein of unknown function DUF152; KEGG: pfl:PFL_5190 hypothetical protein YP_004117321.1 KEGG: stm:STM4481 L-idonate regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004117322.1 KEGG: dda:Dd703_0223 gluconate transporter; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter YP_004117323.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eta:ETA_28940 gluconate 5-dehydrogenase YP_004117324.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dda:Dd703_0221 alcohol dehydrogenase zinc-binding domain protein YP_004117325.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eta:ETA_28950 2,4-dieonyl-coa reductase YP_004117326.1 KEGG: eta:ETA_28960 putative ribosomal RNA small subunit methyltransferase D; PFAM: methyltransferase small YP_004117327.1 PFAM: protein of unknown function DUF45; KEGG: eta:ETA_28970 conserved hypothetical protein YgjP YP_004117328.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: csa:Csal_1417 LysR family transcriptional regulator YP_004117329.1 KEGG: csa:Csal_1416 dimethylaniline monooxygenase (N-oxide forming); PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004117330.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: csa:Csal_1414 short-chain dehydrogenase/reductase SDR YP_004117331.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcj:BCAS0227 putative proline/betaine transporter YP_004117332.1 PFAM: Endoribonuclease L-PSP; KEGG: syf:Synpcc7942_2408 hypothetical protein YP_004117333.1 PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; KEGG: eta:ETA_29020 Cl-channel, voltage gated YP_004117334.1 PFAM: oxidoreductase domain protein; KEGG: cro:ROD_48011 putative oxidoreductase YP_004117335.1 PFAM: Integral membrane protein TerC; KEGG: eta:ETA_29030 membrane protein alx YP_004117336.1 PFAM: sodium:dicarboxylate symporter; KEGG: eta:ETA_29050 serine/threonine transporter SstT YP_004117337.1 KEGG: spe:Spro_4320 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein YP_004117338.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: yen:YE3707 altronate oxidoreductase YP_004117339.1 KEGG: ctu:Ctu_04620 uronate isomerase; PFAM: Glucuronate isomerase YP_004117340.1 KEGG: pct:PC1_0528 D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1 YP_004117341.1 KEGG: spe:Spro_4323 DNA-binding transcriptional repressor ExuR; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH YP_004117342.1 PFAM: SNARE associated Golgi protein; KEGG: spe:Spro_4325 SNARE associated golgi protein YP_004117343.1 KEGG: eta:ETA_29070 hypothetical protein YP_004117344.1 PFAM: protein of unknown function DUF1090; KEGG: stm:STM3228 putative periplasmic protein YP_004117345.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: cko:CKO_04500 hypothetical protein YP_004117346.1 PFAM: Protein of unknown function DUF2311, membrane; KEGG: eta:ETA_29100 hypothetical protein YqjE YP_004117347.1 KEGG: esa:ESA_03511 hypothetical protein YP_004117348.1 PFAM: DoxX family protein; KEGG: ebr:ECB_02970 predicted quinol oxidase subunit YP_004117349.1 KEGG: elf:LF82_3674 uncharacterized protein YqjG YP_004117350.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: eta:ETA_29190 putative tetrapyrrole methylase YP_004117351.1 PFAM: LppC family lipoprotein; KEGG: eta:ETA_29200 putative lipoprotein YP_004117352.1 PFAM: protein of unknown function UPF0102; KEGG: spe:Spro_4337 hypothetical protein YP_004117353.1 PFAM: sugar isomerase (SIS); KEGG: sdy:SDY_3328 DnaA initiator-associating protein DiaA YP_004117354.1 KEGG: eta:ETA_29230 hypothetical protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region YP_004117355.1 PFAM: Pirin domain protein; KEGG: spe:Spro_4334 pirin domain-containing protein YP_004117356.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: set:SEN3076 possible LysR-family transcriptional regulator YP_004117357.1 KEGG: eta:ETA_29240 putative phosphotransferase system mannitol/fructose-specific IIA domain; PFAM: PRD domain protein; Helix-turn-helix type 11 domain protein; M trans-acting positive regulator; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_004117358.1 PFAM: protein of unknown function DUF1341; KEGG: aha:AHA_3917 4-hydroxy-2-oxoglutarate aldolase YP_004117359.1 KEGG: dda:Dd703_3153 pyridoxal phosphate-dependent enzyme; TIGRFAM: pyridoxal phosphate-dependent enzyme; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_004117360.1 PFAM: amidohydrolase; KEGG: ent:Ent638_0429 dihydroorotase YP_004117361.1 KEGG: pwa:Pecwa_0920 putative inner membrane protein YP_004117362.1 KEGG: dda:Dd703_3156 hypothetical protein YP_004117363.1 KEGG: dda:Dd703_3157 hypothetical protein YP_004117364.1 KEGG: pwa:Pecwa_0923 hypothetical protein YP_004117365.1 PFAM: PRD domain protein; KEGG: dda:Dd703_3159 PRD domain protein YP_004117366.1 PFAM: cytochrome b562; KEGG: ctu:Ctu_36210 soluble cytochrome b562 YP_004117367.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: eta:ETA_29340 peptidase PmbA YP_004117368.1 PFAM: protein of unknown function DUF615; KEGG: eta:ETA_29350 hypothetical protein YP_004117369.1 KEGG: eta:ETA_29360 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_004117370.1 PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: eta:ETA_29370 fructose-1,6-bisphosphatase YP_004117371.1 KEGG: eta:ETA_29380 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004117372.1 PFAM: protein of unknown function DUF1311; KEGG: ppw:PputW619_4365 hypothetical protein YP_004117373.1 PFAM: protein of unknown function DUF441; KEGG: ent:Ent638_1667 hypothetical protein YP_004117374.1 KEGG: kpu:KP1_0494 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase YP_004117375.1 KEGG: eum:ECUMN_0912 hypothetical protein; putative membrane protein YP_004117376.1 PFAM: AIG2 family protein; KEGG: eta:ETA_29400 conserved hypothetical protein (UPF0131) YP_004117377.1 PFAM: protein of unknown function DUF490; KEGG: eta:ETA_29410 conserved hypothetical protein (DUF490) YP_004117378.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: eta:ETA_29420 hypothetical protein YP_004117379.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: eta:ETA_29430 putative inner membrane protein YtfL YP_004117380.1 PFAM: protein of unknown function DUF1107; KEGG: eta:ETA_29440 conserved hypothetical protein YtfK YP_004117382.1 PFAM: conserved hypothetical protein; KEGG: esa:ESA_00220 hypothetical protein YP_004117383.1 KEGG: ebw:BWG_3925 PapS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase YP_004117384.1 KEGG: sek:SSPA3921 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase YP_004117385.1 PFAM: peptidylprolyl isomerase FKBP-type; FKBP-type peptidyl-prolyl isomerase domain protein; KEGG: eta:ETA_29480 peptidyl-prolyl cis-trans isomerase YP_004117386.1 PFAM: Opacity-associated protein A; Opacity-associated protein A domain protein; KEGG: eta:ETA_29490 hypothetical protein YP_004117387.1 KEGG: esa:ESA_00203 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like YP_004117388.1 KEGG: dze:Dd1591_0776 ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18 YP_004117389.1 KEGG: sbc:SbBS512_E4734 primosomal replication protein N; manually curated; PFAM: single-strand binding protein/Primosomal replication protein n YP_004117390.1 KEGG: cko:CKO_03633 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like YP_004117391.1 KEGG: ank:AnaeK_3761 methyl-accepting chemotaxis sensory transducer YP_004117392.1 PFAM: phospholipase/Carboxylesterase; KEGG: eta:ETA_29560 esterase YP_004117393.1 KEGG: eta:ETA_29570 putative methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004117394.1 PFAM: protein of unknown function DUF1471; KEGG: efe:EFER_4242 hypothetical protein YP_004117395.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ctu:Ctu_36750 protein AidB YP_004117396.1 KEGG: plu:plu4574 23S rRNA (guanosine-2'-O-)-methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding YP_004117397.1 TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; Ribonuclease B OB region domain; Ribonuclease R winged-helix domain protein; RNA binding S1 domain protein; KEGG: eta:ETA_29600 exoribonuclease R; SMART: Cold shock protein YP_004117398.1 KEGG: ypb:YPTS_0460 transcriptional repressor NsrR; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004117399.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: eta:ETA_29620 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase YP_004117400.1 PFAM: Protein of unknown function DUF2065; KEGG: dda:Dd703_0539 hypothetical protein YP_004117401.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: eta:ETA_29640 FtsH protease regulator HflC; SMART: band 7 protein YP_004117402.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: kpe:KPK_5096 FtsH protease regulator HflK; SMART: band 7 protein YP_004117403.1 KEGG: kpu:KP1_0442 GTP - binding subunit of protease specific for phage lambda CII repressor; TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related YP_004117404.1 KEGG: kpu:KP1_0441 RNA-binding protein; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_004117405.1 PFAM: tRNA isopentenyltransferase; manually curated; KEGG: eta:ETA_29680 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase YP_004117406.1 KEGG: eta:ETA_29690 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutL; PFAM: DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; MutL dimerisation YP_004117407.1 KEGG: eta:ETA_29700 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; Peptidoglycan-binding lysin domain; SMART: cell wall hydrolase/autolysin; Peptidoglycan-binding LysM YP_004117408.1 PFAM: protein of unknown function UPF0079; KEGG: eta:ETA_29710 putative ATPase YP_004117409.1 KEGG: eta:ETA_29720 hypothetical protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein YP_004117410.1 manually curated; TIGRFAM: iron-sulfur cluster binding protein; KEGG: eca:ECA3940 putative 4Fe-4S binding protein; PFAM: domain of unknown function DUF1730 YP_004117411.1 KEGG: eta:ETA_29730 oligoribonuclease; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_004117412.1 KEGG: eta:ETA_29740 ribosome-associated GTPase; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC YP_004117413.1 KEGG: eta:ETA_29750 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related YP_004117414.1 PFAM: MscS Mechanosensitive ion channel; KEGG: eta:ETA_29760 hypothetical protein YP_004117415.1 KEGG: sdy:SDY_3412 malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase YP_004117416.1 KEGG: eta:ETA_02970 arginine repressor; TIGRFAM: arginine repressor; PFAM: arginine repressor YP_004117417.1 PFAM: protein of unknown function DUF1471; KEGG: yen:YE0412 hypothetical protein YP_004117418.1 PFAM: protein of unknown function DUF1471; KEGG: eta:ETA_02950 hypothetical protein YP_004117419.1 PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_0467 hypothetical protein YP_004117420.1 PFAM: Barstar (barnase inhibitor); KEGG: efe:EFER_3217 putative barnase inhibitor YP_004117421.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: eta:ETA_02940 p-hydroxybenzoic acid efflux subunit AaeB YP_004117422.1 PFAM: secretion protein HlyD family protein; KEGG: eta:ETA_02930 p-hydroxybenzoic acid efflux subunit AaeA YP_004117423.1 PFAM: protein of unknown function DUF1656; KEGG: eta:ETA_02920 hypothetical protein YP_004117424.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE3797 putative DNA-binding transcriptional regulator YP_004117425.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: eta:ETA_02900 protease TldD YP_004117426.1 KEGG: eta:ETA_02890 hypothetical protein YP_004117427.1 KEGG: eta:ETA_02880 ribonuclease G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein YP_004117428.1 KEGG: ssn:SSON_3389 Maf-like protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_004117429.1 KEGG: spe:Spro_4409 rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD YP_004117430.1 KEGG: eta:ETA_02850 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC YP_004117431.1 KEGG: ctu:Ctu_03400 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_004117432.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: eta:ETA_02830 regulatory protein CsrD; SMART: EAL domain protein; GGDEF domain containing protein YP_004117433.1 PFAM: oxidoreductase molybdopterin binding; Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: cko:CKO_04662 putative sulfite oxidase subunit YedY YP_004117434.1 PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: ctu:Ctu_03350 UPF0191 membrane protein ESA_03642 YP_004117435.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: ddc:Dd586_0260 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II YP_004117436.1 KEGG: esa:ESA_03644 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_004117437.1 KEGG: eta:ETA_02770 acetyl-CoA carboxylase biotin carboxylase subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein YP_004117438.1 PFAM: protein of unknown function DUF997; KEGG: ctu:Ctu_03310 uncharacterized protein YhdT YP_004117439.1 KEGG: eta:ETA_02750 sodium/panthothenate symporter; TIGRFAM: sodium/pantothenate symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_004117440.1 KEGG: eta:ETA_02740 ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase YP_004117441.1 KEGG: eta:ETA_02730 tRNA-dihydrouridine synthase B; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS YP_004117442.1 PFAM: helix-turn-helix Fis-type; KEGG: ent:Ent638_3700 DNA-binding protein fis YP_004117443.1 KEGG: eta:ETA_02540 general L-amino ABC transporter binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004117444.1 KEGG: eta:ETA_02530 hypothetical amino-acid ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004117445.1 KEGG: ctu:Ctu_03160 inner membrane amino-acid ABC transporter permease protein YhdY; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004117446.1 KEGG: eta:ETA_02510 L-amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004117447.1 KEGG: ent:Ent638_3711 putative transferase YP_004117448.1 PFAM: protein of unknown function DUF1488; KEGG: ent:Ent638_3712 hypothetical protein YP_004117449.1 KEGG: eta:ETA_31230 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase YP_004117450.1 PFAM: SUA5/yciO/yrdC domain; KEGG: spe:Spro_4507 putative ribosome maturation factor YP_004117451.1 PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: ent:Ent638_3715 DNA topoisomerase type IA Zn finger domain-containing protein YP_004117452.1 PFAM: protein of unknown function DUF494; KEGG: eta:ETA_31260 hypothetical protein YP_004117453.1 KEGG: eta:ETA_31270 predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_004117454.1 KEGG: ypb:YPTS_3857 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_004117455.1 KEGG: spe:Spro_4512 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein YP_004117456.1 KEGG: eta:ETA_31300 16S rRNA methyltransferase B; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44 YP_004117457.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: eta:ETA_31310 potassium transporter peripheral membrane component YP_004117458.1 KEGG: eta:ETA_31320 large-conductance mechanosensitive channel; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel YP_004117459.1 PFAM: protein of unknown function DUF331; KEGG: spe:Spro_4516 hypothetical protein YP_004117460.1 TIGRFAM: Zn(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: stt:t4093 zinc-responsive transcriptional regulator; SMART: regulatory protein MerR YP_004117461.1 PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: kpe:KPK_0423 hypothetical protein YP_004117462.1 KEGG: eta:ETA_31370 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17 YP_004117463.1 TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: ctu:Ctu_38230 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type YP_004117464.1 TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: ddc:Dd586_3712 ribosomal protein S4; SMART: RNA-binding S4 domain protein YP_004117465.1 KEGG: eta:ETA_31400 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11 YP_004117466.1 KEGG: kpu:KP1_5018 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_004117467.1 KEGG: eta:ETA_31420 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36 YP_004117468.1 KEGG: eta:ETA_31430 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein YP_004117469.1 KEGG: eta:ETA_31440 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15 YP_004117470.1 KEGG: eic:NT01EI_3576 hypothetical protein; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30 YP_004117471.1 KEGG: ctu:Ctu_38300 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5 YP_004117472.1 KEGG: cro:ROD_45181 50S ribosomal subunit protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_004117473.1 KEGG: eta:ETA_31480 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain YP_004117474.1 PFAM: ribosomal protein S8; KEGG: kpe:KPK_0412 30S ribosomal protein S8 YP_004117475.1 PFAM: ribosomal protein S14; KEGG: sgl:SG2265 30S ribosomal protein S14 YP_004117476.1 PFAM: ribosomal protein L5; KEGG: kpu:KP1_5029 50S ribosomal protein L5 YP_004117477.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: dze:Dd1591_0334 ribosomal protein L24; SMART: KOW domain protein YP_004117478.1 KEGG: cro:ROD_45112 50S ribosomal subunit protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e YP_004117479.1 KEGG: dze:Dd1591_0332 ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_004117480.1 KEGG: kpu:KP1_5034 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_004117481.1 KEGG: eta:ETA_31560 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16 YP_004117482.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: kpu:KP1_5036 30S ribosomal protein S3; SMART: KH domain protein YP_004117483.1 KEGG: kpu:KP1_5037 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_004117484.1 KEGG: kpu:KP1_5038 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_004117485.1 KEGG: stm:STM3437 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2 YP_004117486.1 PFAM: Ribosomal protein L25/L23; KEGG: pwa:Pecwa_3999 ribosomal protein L25/L23 YP_004117487.1 PFAM: ribosomal protein L4/L1e; KEGG: ent:Ent638_3750 50S ribosomal protein L4 YP_004117488.1 KEGG: kpu:KP1_5044 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_004117489.1 KEGG: aat:D11S_0075 hypothetical protein; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10 YP_004117490.1 KEGG: cro:ROD_44861 bacterioferritin; TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein YP_004117491.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ent:Ent638_3755 bacterioferritin-associated ferredoxin YP_004117492.1 KEGG: eta:ETA_31660 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein YP_004117493.1 KEGG: eca:ECA4036 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein YP_004117494.1 KEGG: sbc:SbBS512_E3715 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7 YP_004117495.1 KEGG: eta:ETA_31690 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_004117496.1 KEGG: ypy:YPK_0274 sulfur transfer complex subunit TusB; TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein YP_004117497.1 KEGG: eta:ETA_31710 tRNA 2-thiouridine synthesizing protein C, protein TusC; TIGRFAM: sulfur relay protein TusC/DsrF; PFAM: DsrE family protein YP_004117498.1 KEGG: cro:ROD_44741 tRNA 2-thiouridine synthesizin protein D (sulfurtransferase); TIGRFAM: sulfur relay protein TusD/DsrE; PFAM: DsrE family protein YP_004117499.1 PFAM: YheO domain protein; KEGG: ctu:Ctu_38600 uncharacterized protein YheO YP_004117500.1 KEGG: eta:ETA_31740 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type YP_004117501.1 PFAM: SlyX family protein; KEGG: eta:ETA_31750 host factor for lysis of phiX174 infection SlyX YP_004117502.1 KEGG: ent:Ent638_3766 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: peptidylprolyl isomerase FKBP-type YP_004117503.1 PFAM: conserved hypothetical protein; KEGG: eta:ETA_31770 conserved hypothetical protein YheV YP_004117504.1 KEGG: eta:ETA_31780 glutathione-regulated potassium-efflux system protein KefB; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein YP_004117505.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: eta:ETA_31790 glutathione-regulated potassium-efflux system ancillary protein KefG YP_004117506.1 KEGG: sbc:SbBS512_E3727 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004117507.1 KEGG: eta:ETA_31810 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA YP_004117508.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eum:ECUMN_0407 taurine transporter subunit YP_004117509.1 KEGG: eta:ETA_31830 taurine transport ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004117510.1 TIGRFAM: taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: kpu:KP1_1169 taurine transport system periplasmic binding component; SMART: extracellular solute-binding protein family 3 YP_004117511.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: eta:ETA_31850 predicted lysine exporter protein (LysE/YggA) YP_004117512.1 PFAM: alpha/beta hydrolase fold; KEGG: eta:ETA_31860 putative hydrolase YP_004117513.1 PFAM: protein of unknown function UPF0270; KEGG: pwa:Pecwa_4029 alcohol O-acetyltransferase YP_004117514.1 KEGG: sbo:SBO_3335 phosphoribulokinase; PFAM: phosphoribulokinase/uridine kinase YP_004117515.1 PFAM: OsmC family protein; KEGG: eta:ETA_31890 hypothetical protein YP_004117516.1 KEGG: etr:ETAE_3299 cAMP-regulatory protein; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004117517.1 KEGG: eta:ETA_31910 putative inner membrane protein YhfK; TIGRFAM: integral membrane protein, YccS/YhfK family; PFAM: protein of unknown function DUF893 YccS/YhfK YP_004117518.1 TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferase; KEGG: eta:ETA_31920 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; PFAM: aminotransferase class-III YP_004117519.1 KEGG: pay:PAU_00304 para-aminobenzoate synthase glutamine amidotransferase, component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_004117520.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: ctu:Ctu_38790 cell filamentation protein fic YP_004117521.1 KEGG: sei:SPC_3540 hypothetical protein YP_004117522.1 KEGG: eta:ETA_31940 peptidyl-prolyl cis-trans isomerase A (rotamase A); PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type YP_004117523.1 PFAM: major facilitator superfamily MFS_1; KEGG: eta:ETA_31950 hypothetical protein YP_004117524.1 KEGG: eta:ETA_31980 cytosine deaminase; PFAM: Amidohydrolase 3 YP_004117525.1 KEGG: yen:YE3965 nitrite reductase; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region YP_004117526.1 KEGG: pwa:Pecwa_4047 nitrite reductase (NAD(P)H), small subunit; TIGRFAM: nitrite reductase [NAD(P)H], small subunit YP_004117527.1 KEGG: spe:Spro_4597 nitrite transporter NirC; TIGRFAM: formate/nitrite transporter; PFAM: formate/nitrite transporter YP_004117528.1 KEGG: ctu:Ctu_38860 siroheme synthase 2; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Sirohaem synthase, dimerisation domain YP_004117529.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: eta:ETA_32000 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_004117530.1 KEGG: eta:ETA_32010 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004117531.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: eta:ETA_32020 ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase); PFAM: ribulose-phosphate 3-epimerase YP_004117532.1 KEGG: eta:ETA_32030 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_004117533.1 PFAM: Sporulation domain protein; KEGG: eta:ETA_32040 hypothetical protein YP_004117534.1 TIGRFAM: 3-dehydroquinate synthase; KEGG: eta:ETA_32050 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_004117535.1 KEGG: esa:ESA_04351 shikimate kinase I; PFAM: shikimate kinase YP_004117536.1 KEGG: eta:ETA_32070 putative type II secretion system protein; TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain YP_004117537.1 KEGG: eta:ETA_32080 hypothetical protein YP_004117538.1 KEGG: eta:ETA_32090 hypothetical protein YP_004117539.1 PFAM: Fimbrial assembly family protein; KEGG: abo:ABO_2236 type IV pili biogenesis protein PilN YP_004117540.1 KEGG: eta:ETA_32110 hypothetical protein YP_004117541.1 TIGRFAM: penicillin-binding protein, 1A family; KEGG: eta:ETA_32120 peptidoglycan synthetase; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_004117542.1 PFAM: NUDIX hydrolase; KEGG: eta:ETA_32130 ADP-ribose diphosphatase NudE YP_004117543.1 PFAM: Intracellular growth attenuator IgaA; KEGG: eta:ETA_32140 hypothetical protein YP_004117544.1 KEGG: esa:ESA_04342 hypothetical protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004117545.1 KEGG: eta:ETA_32150 heat shock protein 15; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004117546.1 PFAM: Hsp33 protein; KEGG: eta:ETA_32160 HSP33-like chaperonin YP_004117547.1 KEGG: eta:ETA_32170 phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); PFAM: phosphoenolpyruvate carboxykinase (ATP) YP_004117548.1 KEGG: eta:ETA_32180 osmolarity sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004117549.1 KEGG: cro:ROD_44191 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_004117550.1 KEGG: stm:STM4222.S putative outer membrane protein YP_004117551.1 KEGG: pct:PC1_3908 transcription elongation factor GreB; TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein YP_004117552.1 KEGG: eta:ETA_32220 putative RNA binding protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold YP_004117553.1 KEGG: eta:ETA_32250 sucrose phosphorylase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_004117554.1 PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_4631 hypothetical protein YP_004117555.1 TIGRFAM: bioH protein; KEGG: pwa:Pecwa_4117 BioH protein; PFAM: alpha/beta hydrolase fold YP_004117556.1 PFAM: phosphoribosyltransferase; KEGG: sek:SSPA3150 gluconate periplasmic binding protein YP_004117557.1 KEGG: eta:ETA_32280 putative DNA uptake protein; TIGRFAM: IscR-regulated protein YhgI; PFAM: HesB/YadR/YfhF-family protein; nitrogen-fixing NifU domain protein YP_004117558.1 TIGRFAM: 4-alpha-glucanotransferase; KEGG: eta:ETA_32300 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77 YP_004117559.1 KEGG: kpe:KPK_0328 maltodextrin phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_004117560.1 KEGG: eta:ETA_32330 DNA-binding transcriptional repressor GlpR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004117561.1 KEGG: eta:ETA_32340 intramembrane serine protease GlpG; PFAM: Rhomboid family protein YP_004117562.1 SMART: Rhodanese domain protein; manually curated; KEGG: eta:ETA_32410 thiosulfate sulfurtransferase GlpE; PFAM: Rhodanese domain protein YP_004117563.1 KEGG: eta:ETA_32420 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase YP_004117564.1 KEGG: spe:Spro_4656 xylose isomerase domain-containing protein; PFAM: Xylose isomerase domain protein TIM barrel YP_004117565.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: eta:ETA_32880 myo-inositol 2-dehydrogenase YP_004117566.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: eta:ETA_32890 myo-inositol catabolism protein, malonic semialdehyde oxidative decarboxylase YP_004117567.1 PFAM: Protein of unknown function DUF2090; PfkB domain protein; KEGG: eta:ETA_32900 myo-inositol catabolism protein YP_004117568.1 KEGG: DHRSX; similar to dehydrogenase/reductase (SDR family) X-linked; K11170 dehydrogenase/reductase SDR family member X YP_004117569.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: eta:ETA_32910 putative transcriptional regulator YP_004117570.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: abn:AB57_2845 glycine cleavage system transcriptional activator YP_004117571.1 KEGG: oan:Oant_2780 hypothetical protein YP_004117572.1 PFAM: extracellular solute-binding protein family 5; KEGG: vei:Veis_0409 extracellular solute-binding protein YP_004117573.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0410 binding-protein-dependent transport systems inner membrane component YP_004117574.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0411 binding-protein-dependent transport systems inner membrane component YP_004117575.1 KEGG: vei:Veis_0412 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004117576.1 KEGG: vei:Veis_0413 peptidase S15; TIGRFAM: hydrolase CocE/NonD family protein; PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein YP_004117577.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: eta:ETA_32920 uncharacterized enzyme involved in inositol metabolism YP_004117578.1 KEGG: eta:ETA_32930 putative NAD-dependent aldehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004117579.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: eta:ETA_32950 myo-inositol catabolism protein YP_004117580.1 PFAM: major facilitator superfamily MFS_1; KEGG: elf:LF82_3305 UPF0226 protein YhhS YP_004117581.1 KEGG: pct:PC1_1222 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004117582.1 PFAM: extracellular solute-binding protein family 1; KEGG: ent:Ent638_2070 extracellular solute-binding protein YP_004117583.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_01885 ABC transporter membrane protein YP_004117584.1 KEGG: eta:ETA_32980 putative rtn protein, unknown function; PFAM: EAL domain protein; SMART: EAL domain protein YP_004117585.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: spe:Spro_1336 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_004117586.1 KEGG: eta:ETA_32990 proline/glycine betaine transporter; TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; Osmosensory transporter coiled coil YP_004117587.1 KEGG: eta:ETA_14490 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase YP_004117588.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: vvy:VVA0155 GGDEF family protein; SMART: GGDEF domain containing protein; GAF domain protein YP_004117589.1 PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_2332 alpha/beta hydrolase fold YP_004117590.1 KEGG: apa:APP7_1820 transposon Tn10 TetD protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004117591.1 PFAM: protein of unknown function DUF1471; KEGG: kpu:KP1_1407 hypothetical protein YP_004117592.1 KEGG: kpn:KPN_03413 hypothetical protein YP_004117593.1 PFAM: high-affinity nickel-transporter; KEGG: dda:Dd703_0085 high-affinity nickel-transporter YP_004117594.1 PFAM: protein of unknown function DUF156; KEGG: dda:Dd703_0084 protein of unknown function DUF156 YP_004117595.1 PFAM: FAD dependent oxidoreductase; KEGG: ddc:Dd586_2511 FAD dependent oxidoreductase YP_004117596.1 PFAM: Endoribonuclease L-PSP; KEGG: ddc:Dd586_2510 endoribonuclease L-PSP YP_004117597.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: ddc:Dd586_2509 ornithine cyclodeaminase/mu-crystallin YP_004117598.1 KEGG: ddc:Dd586_2508 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004117599.1 PFAM: amino acid permease-associated region; KEGG: ddc:Dd586_2507 amino acid permease-associated region YP_004117600.1 KEGG: eca:ECA4490 hypothetical protein; manually curated; PFAM: protein of unknown function DUF6 transmembrane YP_004117601.1 KEGG: spe:Spro_3019 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_004117602.1 KEGG: ctu:Ctu_1p00460 protein hcp1; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_004117603.1 KEGG: pin:Ping_2317 hypothetical protein YP_004117604.1 KEGG: eta:ETA_33170 hypothetical protein; manually curated; PFAM: HI0933 family protein YP_004117605.1 PFAM: phosphate transporter; KEGG: eta:ETA_33180 low-affinity inorganic phosphate transporter YP_004117606.1 PFAM: Universal stress protein B; KEGG: cko:CKO_04942 universal stress protein UspB YP_004117607.1 PFAM: UspA domain protein; KEGG: dda:Dd703_3927 UspA domain protein YP_004117608.1 PFAM: protein of unknown function DUF548; KEGG: eta:ETA_33210 putative methyltransferase YP_004117609.1 KEGG: esa:ESA_04224 oligopeptidase A; PFAM: peptidase M3A and M3B thimet/oligopeptidase F YP_004117610.1 PFAM: protein of unknown function DUF519; KEGG: eta:ETA_33240 conserved hypothetical protein YhiR YP_004117611.1 TIGRFAM: ribonuclease Z; KEGG: eta:ETA_33250 ribonuclease Z YP_004117612.1 KEGG: kpe:KPK_0241 glutathione reductase; TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004117613.1 KEGG: dze:Dd1591_3329 hypothetical protein YP_004117614.1 KEGG: eta:ETA_30540 hypothetical protein YP_004117615.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bgl:bglu_1g10950 alcohol dehydrogenase, zinc-binding domain protein YP_004117616.1 PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: gym:GYMC10_3404 epoxide hydrolase domain protein YP_004117617.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_3237 short chain dehydrogenase YP_004117618.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA1978 LysR family transcriptional regulator YP_004117619.1 PFAM: isochorismatase hydrolase; KEGG: kpu:KP1_1207 isochorismatase family protein YP_004117620.1 PFAM: protein of unknown function UPF0187; KEGG: eta:ETA_17420 conserved hypothetical protein YneE YP_004117621.1 KEGG: eta:ETA_33430 putative acetylesterase YP_004117622.1 KEGG: MAP1B; microtubule-associated protein 1B; K10429 microtubule-associated protein 1 YP_004117623.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE4032 hypothetical protein YP_004117624.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: esa:ESA_02263 hypothetical protein YP_004117625.1 PFAM: conserved hypothetical protein; KEGG: eta:ETA_33440 hypothetical protein YP_004117626.1 KEGG: eta:ETA_33620 sensor protein KdpD; PFAM: Osmosensitive K channel His kinase sensor; UspA domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004117627.1 TIGRFAM: potassium-transporting ATPase, C subunit; KEGG: eta:ETA_33630 potassium-transporting ATPase, C chain; PFAM: K transporting ATPase KdpC subunit YP_004117628.1 KEGG: eta:ETA_33640 potassium-transporting ATPase subunit B; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_004117629.1 TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: eta:ETA_33650 potassium-transporting ATPase subunit A; PFAM: K transporting ATPase A subunit YP_004117630.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: mpt:Mpe_A1096 hypothetical protein; SMART: metal-dependent phosphohydrolase HD region YP_004117631.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: pct:PC1_3183 plasmid maintenance system antidote protein, XRE family; SMART: helix-turn-helix domain protein YP_004117632.1 PFAM: plasmid maintenance system killer; KEGG: cko:CKO_02070 hypothetical protein YP_004117633.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ect:ECIAI39_1353 putative 2-hydroxyacid dehydrogenase/reductase YP_004117634.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl01_0829 D-galactonate transporter YP_004117635.1 KEGG: tdn:Suden_0551 hypothetical protein YP_004117636.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpu:KP1_3363 putative rhizopine uptake ABC transport system periplasmic solute-binding protein precursor YP_004117637.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pmr:PMI3525 acetyltransferase YP_004117638.1 KEGG: ppf:Pput_1348 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004117639.1 PFAM: protein of unknown function DUF482; KEGG: eta:ETA_33540 conserved hypothetical protein (DUF482) YP_004117640.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: tau:Tola_1644 transcriptional regulator, LysR family YP_004117641.1 KEGG: tau:Tola_1642 glutathione transferase; PFAM: Glutathione S-transferase domain YP_004117642.1 PFAM: phospholipase/Carboxylesterase; KEGG: ara:Arad_12241 phospholipase/carboxylesterase YP_004117643.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: eta:ETA_15010 hypothetical protein YP_004117644.1 KEGG: ecz:pECS88_0015 putative membrane protein; CrcB-like protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein YP_004117645.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: eta:ETA_33720 inosine/uridine-preferring nucleoside hydrolase YP_004117646.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: spe:Spro_1409 alcohol dehydrogenase YP_004117647.1 KEGG: spe:Spro_1408 GntR family transcriptional regulator; manually curated; PFAM: GntR domain protein; regulatory protein GntR HTH YP_004117648.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1407 major facilitator transporter YP_004117649.1 KEGG: pwa:Pecwa_4404 transcriptional regulator, LysR family; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR YP_004117650.1 KEGG: dze:Dd1591_3994 membrane dipeptidase; PFAM: peptidase M19 renal dipeptidase YP_004117651.1 PFAM: extracellular solute-binding protein family 5; KEGG: dze:Dd1591_3993 extracellular solute-binding protein family 5 YP_004117652.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddc:Dd586_0118 binding-protein-dependent transport systems inner membrane component YP_004117653.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_0137 binding-protein-dependent transport systems inner membrane component YP_004117654.1 KEGG: ddc:Dd586_0120 ABC transporter related protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004117655.1 KEGG: dda:Dd703_0139 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004117656.1 PFAM: beta-lactamase; KEGG: dda:Dd703_0140 beta-lactamase YP_004117657.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ctu:Ctu_35670 hypothetical protein YP_004117658.1 PFAM: peptidase M55 D-aminopeptidase; KEGG: dze:Dd1591_3975 peptidase M55 D-aminopeptidase YP_004117659.1 PFAM: peptidase S58 DmpA; KEGG: pct:PC1_4112 peptidase S58 DmpA YP_004117660.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_0144 binding-protein-dependent transport systems inner membrane component YP_004117661.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddc:Dd586_0137 binding-protein-dependent transport systems inner membrane component YP_004117662.1 PFAM: extracellular solute-binding protein family 5; KEGG: dda:Dd703_0146 extracellular solute-binding protein family 5 YP_004117663.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: pct:PC1_4108 ABC transporter related; SMART: AAA ATPase YP_004117664.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ddc:Dd586_0140 mandelate racemase/muconate lactonizing protein YP_004117665.1 PFAM: protein of unknown function DUF1611; KEGG: ddc:Dd586_0141 protein of unknown function DUF1611 YP_004117666.1 PFAM: protein of unknown function DUF204; KEGG: eta:ETA_33770 hypothetical protein YP_004117667.1 PFAM: protein of unknown function DUF1158; KEGG: ent:Ent638_1081 hypothetical protein YP_004117668.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mei:Msip34_2668 NAD(P)H dehydrogenase (quinone) YP_004117669.1 KEGG: reu:Reut_C6135 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004117670.1 KEGG: bac:BamMC406_6087 alkylhydroperoxidase; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004117671.1 TIGRFAM: malate/quinone oxidoreductase; KEGG: eta:ETA_01050 malate:quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase YP_004117672.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: eta:ETA_01040 lysine exporter protein (LysE/YggA) YP_004117673.1 KEGG: eca:ECA3308 putative aminotransferase; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004117674.1 PFAM: Glutathione S-transferase domain; KEGG: pwa:Pecwa_1174 glutathione S-transferase domain protein YP_004117675.1 KEGG: eta:ETA_01020 putative antibiotic biosynthesis protein; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein YP_004117676.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ent:Ent638_3917 short-chain dehydrogenase/reductase SDR YP_004117677.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: hypothetical protein LOC100167626 YP_004117678.1 KEGG: eta:ETA_01010 predicted membrane protein; TIGRFAM: ribonuclease; PFAM: ribonuclease BN YP_004117679.1 KEGG: spe:Spro_4745 major facilitator superfamily metabolite/H(+) symporter; TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter YP_004117680.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: esa:ESA_03781 ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase; Acetohydroxy acid isomeroreductase catalytic domain protein YP_004117681.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_01890 DNA-binding transcriptional regulator IlvY YP_004117682.1 KEGG: eta:ETA_01880 threonine dehydratase; TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; Threonine dehydratase domain protein YP_004117683.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: eta:ETA_01870 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_004117684.1 KEGG: cro:ROD_39781 branched-chain amino-acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_004117685.1 KEGG: eta:ETA_01850 acetolactate synthase 2 regulatory subunit YP_004117686.1 KEGG: eta:ETA_01840 acetolactate synthase 2 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding YP_004117687.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: eta:ETA_01830 probable magnesium-chelatase; SMART: AAA ATPase YP_004117688.1 PFAM: protein of unknown function DUF413; KEGG: eta:ETA_01820 hypothetical protein YP_004117689.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eta:ETA_01810 transcriptional regulator HdfR YP_004117690.1 TIGRFAM: glutamate racemase; KEGG: sdy:SDY_3761 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_004117691.1 KEGG: spe:Spro_4770 vitamin B12/cobalamin outer membrane transporter; TIGRFAM: TonB-dependent vitamin B12 receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004117692.1 KEGG: esa:ESA_03801 tRNA (uracil-5-)-methyltransferase; TIGRFAM: tRNA (uracil-5-)-methyltransferase; PFAM: (Uracil-5)-methyltransferase YP_004117693.1 PFAM: protein of unknown function DUF1422; KEGG: eta:ETA_01420 hypothetical protein YP_004117694.1 PFAM: regulatory protein TetR; KEGG: ypb:YPTS_0129 DNA-binding transcriptional repressor FabR YP_004117695.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: eta:ETA_01400 soluble pyridine nucleotide transhydrogenase YP_004117696.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cko:CKO_03032 DNA-binding transcriptional regulator OxyR YP_004117697.1 KEGG: eta:ETA_01370 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_004117698.1 TIGRFAM: argininosuccinate synthase; KEGG: eta:ETA_01360 argininosuccinate synthase; PFAM: argininosuccinate synthase YP_004117699.1 TIGRFAM: acetylglutamate kinase; KEGG: eta:ETA_01350 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004117700.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: spe:Spro_4781 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_004117701.1 KEGG: eta:ETA_01340 acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein YP_004117702.1 KEGG: eta:ETA_01330 phosphoenolpyruvate carboxylase; PFAM: phosphoenolpyruvate carboxylase YP_004117703.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: eta:ETA_01290 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_004117704.1 KEGG: esa:ESA_03821 bifunctional aspartate kinase II/homoserine dehydrogenase II; TIGRFAM: aspartate kinase; PFAM: homoserine dehydrogenase; aspartate/glutamate/uridylate kinase; homoserine dehydrogenase NAD-binding YP_004117705.1 KEGG: eta:ETA_01270 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004117706.1 PFAM: Methionine repressor MetJ; KEGG: eta:ETA_01260 transcriptional repressor protein MetJ YP_004117707.1 KEGG: msu:MS0448 RpmE protein; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_004117708.1 TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: eta:ETA_01220 primosome assembly protein PriA; SMART: DEAD-like helicase ; helicase domain protein YP_004117709.1 KEGG: eta:ETA_01210 DNA-binding transcriptional regulator CytR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004117710.1 KEGG: eta:ETA_01200 cell division protein FtsN; TIGRFAM: cell division protein FtsN; PFAM: Sporulation domain protein YP_004117711.1 PFAM: 20S proteasome A and B subunits; KEGG: eta:ETA_01190 ATP-dependent protease peptidase subunit YP_004117712.1 TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; KEGG: cro:ROD_38151 ATP-dependent Hsl protease ATP-binding subunit (heat shock protein); SMART: AAA ATPase YP_004117713.1 KEGG: eta:ETA_01170 ribonuclease activity regulator protein RraA; TIGRFAM: regulator of ribonuclease activity A; PFAM: Dimethylmenaquinone methyltransferase YP_004117714.1 PFAM: protein of unknown function DUF904; KEGG: eta:ETA_01160 hypothetical protein YP_004117715.1 KEGG: spe:Spro_4797 MIP family channel protein; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein YP_004117716.1 KEGG: eta:ETA_01140 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like YP_004117717.1 TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: eta:ETA_01120 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein YP_004117718.1 PFAM: major facilitator superfamily MFS_1; KEGG: eta:ETA_01110 multidrug resistance protein D YP_004117719.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: spe:Spro_4802 ferredoxin-NADP reductase YP_004117720.1 PFAM: protein of unknown function DUF1454; KEGG: eta:ETA_01070 conserved hypothetical protein YiiQ YP_004117721.1 TIGRFAM: triosephosphate isomerase; KEGG: spe:Spro_4805 triosephosphate isomerase; PFAM: triosephosphate isomerase YP_004117722.1 KEGG: eta:ETA_01000 CDP-diacylglycerol pyrophosphatase; PFAM: CDP-diacylglycerol pyrophosphatase YP_004117723.1 KEGG: eta:ETA_00990 sulfate transporter subunit; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004117724.1 KEGG: eta:ETA_00980 6-phosphofructokinase isozyme I; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase YP_004117725.1 manually curated; TIGRFAM: cation diffusion facilitator family transporter; KEGG: esa:ESA_04126 ferrous iron efflux protein F; PFAM: cation efflux protein YP_004117726.1 PFAM: protein of unknown function Spy-related; KEGG: eta:ETA_00960 periplasmic repressor of cpx regulon by interaction with CpxA YP_004117727.1 KEGG: eta:ETA_00950 DNA-binding transcriptional regulator CpxR; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_004117728.1 KEGG: eta:ETA_00940 two-component sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004117729.1 KEGG: eta:ETA_00930 putative tRNA/rRNA methyltransferase YibK; TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_004117730.1 KEGG: cko:CKO_05064 serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: serine acetyltransferase domain protein; transferase hexapeptide repeat containing protein YP_004117731.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: eta:ETA_00910 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_004117732.1 KEGG: stm:STM3701 preprotein translocase subunit SecB; TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB YP_004117733.1 KEGG: cro:ROD_42061 glutaredoxin 3; TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin YP_004117734.1 KEGG: eta:ETA_00880 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004117735.1 PFAM: Peptidase M23; KEGG: eta:ETA_00870 hypothetical protein YP_004117736.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: eta:ETA_00860 putative periplasmic protein of unknown function YP_004117737.1 PFAM: glycosyl transferase family 9; KEGG: pay:PAU_01585 putative LPS biosynthesis enzyme (lipopolysaccharide core biosynthesi protein rfaq) YP_004117738.1 PFAM: glycosyl transferase family 9; KEGG: spe:Spro_4076 putative glycosyl transferase YP_004117739.1 KEGG: eta:ETA_00830 ADP-heptose:LPS heptosyl transferase I; TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9 YP_004117740.1 KEGG: sfv:SFV_3908 ADP-heptose:LPS heptosyltransferase II; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9 YP_004117741.1 KEGG: eta:ETA_00850 ADP-L-glycero-D-mannoheptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004117742.1 TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; KEGG: spe:Spro_4824 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II YP_004117743.1 KEGG: elf:LF82_2238 L-threonine 3-dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein YP_004117744.1 PFAM: glycosyl transferase group 1; KEGG: spe:Spro_4834 glycosyl transferase group 1 YP_004117745.1 PFAM: glycosyl transferase family 9; KEGG: spe:Spro_4835 glycosyl transferase family protein YP_004117746.1 PFAM: glycosyl transferase family 2; KEGG: ect:ECIAI39_4136 putative glycosyl transferase YP_004117747.1 KEGG: sgl:SG2201 putative lipopolysaccharide glucosyltransferase; TIGRFAM: lipopolysaccharide heptosyltransferase III; PFAM: glycosyl transferase family 9 YP_004117748.1 PFAM: glycosyl transferase group 1; KEGG: etr:ETAE_0074 glucuronic acid transferase YP_004117749.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; glycosyl transferase group 1; KEGG: spe:Spro_4836 3-deoxy-D-manno-octulosonic-acid transferase YP_004117750.1 PFAM: glycosyl transferase family 2; KEGG: eta:ETA_00710 lipopolysaccharide core biosynthesis glycosyl transferase YP_004117751.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: kpu:KP1_5326 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase YP_004117752.1 TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: eta:ETA_00690 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding YP_004117753.1 KEGG: cro:ROD_41791 50S ribosomal subunit protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33 YP_004117754.1 KEGG: kpu:KP1_5329 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28 YP_004117755.1 KEGG: pct:PC1_4100 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_004117756.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: eta:ETA_00650 flavoprotein affecting synthesis of DNA and pantothenate metabolism; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_004117757.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: ebd:ECBD_0086 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase YP_004117758.1 PFAM: regulatory protein TetR; KEGG: ctu:Ctu_41460 HTH-type protein SlmA YP_004117759.1 TIGRFAM: orotate phosphoribosyltransferase; KEGG: spe:Spro_4846 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004117760.1 TIGRFAM: ribonuclease PH; KEGG: spe:Spro_4847 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_004117761.1 PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein; KEGG: spe:Spro_4861 nucleoside transporter YP_004117762.1 KEGG: ctu:Ctu_16000 hypothetical protein YP_004117763.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: kpu:KP1_5345 putative alpha helix protein YP_004117764.1 KEGG: ctu:Ctu_09250 protein ddg; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase YP_004117765.1 KEGG: pfo:Pfl01_3644 RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004117766.1 PFAM: alanine racemase domain protein; KEGG: bcm:Bcenmc03_3951 alanine racemase domain-containing protein YP_004117767.1 KEGG: eta:ETA_33710 hypothetical protein YP_004117768.1 KEGG: ankyrin repeat protein YP_004117770.1 PFAM: polysaccharide biosynthesis protein; KEGG: stm:STM2102 colanic acid exporter YP_004117771.1 PFAM: protein of unknown function UPF0126; KEGG: eta:ETA_00450 conserved hypothetical protein YicG YP_004117772.1 PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; KEGG: eta:ETA_00440 NAD-dependent DNA ligase LigB; SMART: NAD-dependent DNA ligase YP_004117773.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: eta:ETA_00430 guanylate kinase; PFAM: guanylate kinase YP_004117774.1 KEGG: eta:ETA_00420 DNA-directed RNA polymerase omega chain; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6 YP_004117775.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: eta:ETA_00410 bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain protein; amino acid-binding ACT domain protein YP_004117776.1 KEGG: kpu:KP1_5354 putative tRNA/rRNA methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_004117777.1 TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: eta:ETA_00390 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase domain protein YP_004117778.1 KEGG: rlt:Rleg2_1657 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004117779.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_4092 zinc-binding alcohol dehydrogenase YP_004117780.1 KEGG: eta:ETA_00380 putative purine/xanthine transport protein; TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_004117781.1 PFAM: AsmA family protein; KEGG: eta:ETA_00370 conserved hypothetical protein YicH YP_004117782.1 KEGG: eta:ETA_00350 putative acetyltransferase; TIGRFAM: thioesterase domain protein; PFAM: Thioesterase putative; GCN5-related N-acetyltransferase YP_004117783.1 KEGG: dda:Dd703_3956 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_004117784.1 KEGG: eta:ETA_00330 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_004117785.1 KEGG: cro:ROD_38751 phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004117786.1 KEGG: kpe:KPK_5503 GTP-binding protein; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein YP_004117787.1 KEGG: eta:ETA_00300 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_004117788.1 KEGG: eta:ETA_00290 nitrogen regulation protein NR(II); PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_004117789.1 TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; KEGG: eta:ETA_00280 nitrogen regulation protein NR(I); SMART: response regulator receiver; AAA ATPase YP_004117790.1 KEGG: pct:PC1_4223 hypothetical protein YP_004117791.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: cro:ROD_38941 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_004117792.1 PFAM: protein of unknown function DUF414; KEGG: eta:ETA_00260 hypothetical protein YP_004117793.1 KEGG: ecv:APECO1_2597 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related YP_004117794.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: eta:ETA_00240 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA-directed DNA polymerase YP_004117795.1 PFAM: DSBA oxidoreductase; KEGG: eta:ETA_00230 periplasmic protein disulfide isomerase I YP_004117796.1 PFAM: aminoglycoside phosphotransferase; KEGG: eta:ETA_00220 serine/threonine protein kinase YP_004117797.1 PFAM: protein of unknown function DUF1040; KEGG: dda:Dd703_3970 protein of unknown function DUF1040 YP_004117798.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: eta:ETA_00200 molybdopterin-guanine dinucleotide biosynthesis protein A YP_004117799.1 KEGG: pct:PC1_4232 molybdopterin-guanine dinucleotide biosynthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region YP_004117800.1 KEGG: eta:ETA_00190 putative MFS family transport protein; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004117801.1 KEGG: eta:ETA_00180 transcriptional repressor RbsR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004117802.1 KEGG: spe:Spro_4897 ribokinase; TIGRFAM: ribokinase; PFAM: PfkB domain protein YP_004117803.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: eta:ETA_00160 D-ribose transporter subunit RbsB YP_004117804.1 PFAM: inner-membrane translocator; KEGG: eta:ETA_00150 ribose ABC transporter permease protein YP_004117805.1 KEGG: eoj:ECO26_4829 ATP-binding component RbsA of D-ribose high-affinity transport system; PFAM: ABC transporter related; SMART: AAA ATPase YP_004117806.1 PFAM: RbsD or FucU transport; KEGG: eta:ETA_00130 D-ribose high-affinity transport system YP_004117807.1 KEGG: aha:AHA_0977 chitinase A; PFAM: Carbohydrate-binding family V/XII; SMART: Carbohydrate-binding family V/XII YP_004117808.1 PFAM: conserved hypothetical protein; KEGG: pwa:Pecwa_4529 hypothetical protein YP_004117809.1 KEGG: pwa:Pecwa_4530 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_004117810.1 KEGG: pwa:Pecwa_4531 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004117811.1 KEGG: esa:ESA_04021 potassium transport protein Kup; TIGRFAM: potassium uptake protein; PFAM: K potassium transporter YP_004117812.1 KEGG: eta:ETA_00050 regulatory ATPase RavA; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_004117813.1 KEGG: eta:ETA_00040 hypothetical protein; PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A YP_004117814.1 PFAM: protein of unknown function DUF323; Methyltransferase type 12; KEGG: eta:ETA_00030 conserved hypothetical protein (DUF323) YP_004117815.1 KEGG: eta:ETA_00020 DNA-binding transcriptional regulator AsnC; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type YP_004117816.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: eta:ETA_00010 flavodoxin YP_004117817.1 KEGG: eta:ETA_34840 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A YP_004117818.1 KEGG: eta:ETA_34830 16S rRNA methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein YP_004117819.1 PFAM: ATP synthase I chain; KEGG: eta:ETA_34820 F0F1 ATP synthase subunit I YP_004117820.1 KEGG: eta:ETA_34810 F0F1 ATP synthase subunit A; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit YP_004117821.1 KEGG: eta:ETA_34800 F0F1 ATP synthase subunit C; TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit YP_004117822.1 KEGG: dze:Dd1591_4190 ATP synthase F0, B subunit; TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit YP_004117823.1 KEGG: eta:ETA_34780 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit YP_004117824.1 KEGG: eta:ETA_34770 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_004117825.1 KEGG: eta:ETA_34760 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit YP_004117826.1 TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: eta:ETA_34750 F0F1 ATP synthase subunit beta; SMART: AAA ATPase YP_004117827.1 KEGG: cro:ROD_40091 ATP synthase epsilon subunit; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like YP_004117828.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; KEGG: kpe:KPK_5547 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein YP_004117829.1 KEGG: dze:Dd1591_4198 glucosamine/fructose-6-phosphate aminotransferase, isomerizing; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS) YP_004117830.1 KEGG: eta:ETA_34650 phosphate ABC transporter periplasmic substrate-binding protein PstS; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004117831.1 KEGG: eta:ETA_34640 phosphate transporter permease subunit PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component YP_004117832.1 KEGG: eta:ETA_34630 phosphate transporter permease subunit PtsA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component YP_004117833.1 TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: ent:Ent638_4140 phosphate transporter subunit; SMART: AAA ATPase YP_004117834.1 KEGG: eta:ETA_34610 transcriptional regulator PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein YP_004117835.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3798 major facilitator transporter YP_004117836.1 KEGG: spe:Spro_0020 6-phosphogluconate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004117837.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: eta:ETA_34590 putative xanthine/uracil permease family, YieG YP_004117838.1 KEGG: eta:ETA_34580 conserved hypothetical protein YieE YP_004117839.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: mes:Meso_2385 flavin reductase-like, FMN-binding YP_004117840.1 PFAM: nitroreductase; KEGG: atc:AGR_C_4536 putative enzyme YP_004117841.1 KEGG: cko:CKO_00052 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related YP_004117842.1 KEGG: eta:ETA_34560 putative inner membrane protein translocase component YidC; TIGRFAM: membrane protein insertase, YidC/Oxa1 family domain containing; membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein YP_004117843.1 PFAM: protein of unknown function DUF37; KEGG: ctu:Ctu_00360 putative alpha-hemolysin YP_004117844.1 KEGG: cro:ROD_40242 protein C5 component of RNase P; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein YP_004117845.1 KEGG: spe:Spro_0031 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34 YP_004117846.1 PFAM: protein of unknown function DUF1479; KEGG: kpu:KP1_1814 hypothetical protein YP_004117847.1 KEGG: efe:EFER_1670 HTH-type transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004117848.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: kpu:KP1_2803 putative NADH:flavin oxidoreductase YP_004117849.1 KEGG: yen:YE0940 cold shock-like protein CspG; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004117850.1 KEGG: dac:Daci_1890 transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004117851.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dac:Daci_1891 hypothetical protein YP_004117852.1 PFAM: periplasmic binding protein; KEGG: ddc:Dd586_3074 ABC transporter, substrate binding protein YP_004117853.1 KEGG: ddc:Dd586_2172 transcriptional regulator, IclR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004117854.1 PFAM: Endoribonuclease L-PSP; KEGG: ddc:Dd586_2173 endoribonuclease L-PSP YP_004117855.1 KEGG: dda:Dd703_3110 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004117856.1 KEGG: ddc:Dd586_2175 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004117857.1 KEGG: ddc:Dd586_2176 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004117858.1 KEGG: ddc:Dd586_2177 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004117859.1 PFAM: alanine racemase domain protein; KEGG: ddc:Dd586_2178 alanine racemase domain protein YP_004117860.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mab:MAB_0691 short chain dehydrogenase YP_004117861.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bid:Bind_1771 LysR family transcriptional regulator YP_004117862.1 KEGG: bac:BamMC406_6316 hypothetical protein YP_004117863.1 KEGG: eci:UTI89_C3202 hypothetical protein YP_004117864.1 KEGG: GH14873 gene product from transcript GH14873-RA YP_004117865.1 KEGG: rso:RS03019 hypothetical protein YP_004117866.1 KEGG: xoo:XOO0223 hypothetical protein YP_004117867.1 KEGG: plu:plu3237 hypothetical protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345; Rhs element Vgr protein YP_004117868.1 KEGG: tmz:Tmz1t_3053 aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_004117869.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: mpo:Mpop_0240 fusaric acid resistance protein conserved region YP_004117870.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: kpe:KPK_0981 aliphatic sulfonates ABC transporter family, periplasmic substrate-binding protein; SMART: extracellular solute-binding protein family 3 YP_004117871.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: kpe:KPK_0980 hypothetical protein YP_004117872.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpe:KPK_0979 transporter, major facilitator family YP_004117873.1 PFAM: NLPA lipoprotein; KEGG: kpu:KP1_4421 putative ABC-type metal ion transport system periplasmic component YP_004117874.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpe:KPK_0977 ABC transporter, permease protein YP_004117875.1 KEGG: kpu:KP1_4423 putative D- and L-methionine transporter ATP-binding component; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase YP_004117876.1 KEGG: kpu:KP1_4424 coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein YP_004117877.1 PFAM: FAD dependent oxidoreductase; KEGG: kpe:KPK_0974 FAD-dependent oxidoreductase YP_004117878.1 TIGRFAM: alkanesulfonate monooxygenase, FMNH(2)-dependent; KEGG: kpu:KP1_4426 alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup YP_004117879.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; KEGG: kpu:KP1_4428 putative transcriptional regulator; SMART: AAA ATPase; extracellular solute-binding protein family 3 YP_004117880.1 TIGRFAM: parB-like partition protein; PFAM: ParB family protein; ParB domain protein nuclease; KEGG: esa:ESA_pESA3p05553 hypothetical protein; SMART: ParB domain protein nuclease YP_004117881.1 KEGG: esa:ESA_pESA3p05554 hypothetical protein YP_004117883.1 PFAM: initiator RepB protein; KEGG: pay:PAU_p0001 putative replication protein A YP_004117884.1 PFAM: Aldehyde Dehydrogenase; KEGG: ctu:Ctu_21660 aldehyde dehydrogenase-like protein YneI YP_004117885.1 KEGG: spe:Spro_4019 hypothetical protein YP_004117886.1 PFAM: protein of unknown function DUF182; KEGG: spe:Spro_4020 hypothetical protein YP_004117887.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; cytochrome c class I; KEGG: spe:Spro_2315 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_004117888.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: spe:Spro_2314 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_004117889.1 KEGG: spe:Spro_2313 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004117890.1 KEGG: spe:Spro_2312 hypothetical protein YP_004117891.1 PFAM: amine oxidase; KEGG: spe:Spro_2311 monooxygenase FAD-binding YP_004117892.1 PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_2310 alpha/beta hydrolase fold YP_004117893.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: ppg:PputGB1_3577 Asp/Glu/hydantoin racemase YP_004117894.1 KEGG: spe:Spro_2308 N-carbamoylsarcosine amidase; PFAM: isochorismatase hydrolase YP_004117895.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2307 major facilitator transporter YP_004117896.1 KEGG: pwa:Pecwa_3311 nucleoside transporter; TIGRFAM: nucleoside transporter; PFAM: nucleoside:H symporter YP_004117897.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: ecm:EcSMS35_0965 ADP-ribosylglycohydrolase family protein YP_004117898.1 PFAM: PfkB domain protein; KEGG: cko:CKO_00683 hypothetical protein YP_004117899.1 KEGG: cko:CKO_00682 hypothetical protein; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004117900.1 KEGG: plu:plu4441 hypothetical protein YP_004117901.1 PFAM: S-type Pyocin domain protein; HNH endonuclease; KEGG: kpn:KPN_pKPN4p07040 klebicin B YP_004117902.1 PFAM: Colicin immunity protein/pyocin immunity protein; KEGG: pay:PAU_01218 colicin-E7 immunity protein (imme7) (microcin-E7 immunity protein) YP_004117903.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ppw:PputW619_2974 GCN5-related N-acetyltransferase YP_004117904.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: pen:PSEEN4760 4-oxalocrotonate tautomerase YP_004117905.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: cko:CKO_00925 hypothetical protein YP_004117906.1 KEGG: ecm:EcSMS35_2382 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004117907.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bvi:Bcep1808_4561 hypothetical protein YP_004117908.1 PFAM: acyltransferase 3; KEGG: dno:DNO_0252 hypothetical protein YP_004117909.1 PFAM: PfkB domain protein; KEGG: rso:RS05074 putative fructokinase-like protein (sugar kinase) YP_004117910.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: pol:Bpro_5092 dimethylmenaquinone methyltransferase YP_004117911.1 KEGG: pol:Bpro_5093 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region YP_004117912.1 PFAM: major facilitator superfamily MFS_1; KEGG: rlt:Rleg2_5999 major facilitator superfamily MFS_1 YP_004117913.1 PFAM: major royal jelly protein; KEGG: gym:GYMC10_1149 major royal jelly protein YP_004117914.1 KEGG: stm:STM4042A hypothetical protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_004117915.1 PFAM: AzlC family protein; KEGG: kpn:KPN_04200 hypothetical protein YP_004117916.1 PFAM: branched-chain amino acid transport; KEGG: cro:ROD_38551 hypothetical protein YP_004117917.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kpe:KPK_2815 acetyltransferase, GNAT family YP_004117918.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE4108 hypothetical protein YP_004117919.1 KEGG: ctu:Ctu_29900 hypothetical protein; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein YP_004117920.1 PFAM: Amidase; KEGG: pst:PSPTO_3192 amidase family protein YP_004117921.1 KEGG: psp:PSPPH_2188 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004117922.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: bpy:Bphyt_0043 allantoate amidohydrolase; PFAM: peptidase M20 YP_004117923.1 PFAM: aminoglycoside phosphotransferase; KEGG: psb:Psyr_3055 aminoglycoside phosphotransferase YP_004117924.1 PFAM: Choline/ethanolamine kinase; KEGG: pst:PSPTO_3188 choline/ethanolamine kinase YP_004117925.1 KEGG: psp:PSPPH_2190 hypothetical protein YP_004117926.1 PFAM: Na+/solute symporter; KEGG: psp:PSPPH_2191 sodium:solute symporter family protein YP_004117927.1 KEGG: eum:ECUMN_1023 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004117929.1 PFAM: ThiJ/PfpI domain protein; KEGG: dda:Dd703_2109 ThiJ/PfpI domain protein YP_004117930.1 TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; KEGG: bcm:Bcenmc03_1307 cyclic peptide transporter; SMART: AAA ATPase YP_004117931.1 PFAM: transport system permease protein; KEGG: bgl:bglu_2g09790 transport system permease protein YP_004117932.1 PFAM: periplasmic binding protein; KEGG: avn:Avin_50340 iron(III)-siderophore-binding periplasmic protein YP_004117933.1 KEGG: ara:Arad_9688 ferrichrome-iron transporter; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004117934.1 KEGG: bcm:Bcenmc03_1308 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain YP_004117935.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pen:PSEEN3288 short chain dehydrogenase/reductase family oxidoreductase YP_004117936.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pen:PSEEN3287 LysR family transcriptional regulator YP_004117937.1 TIGRFAM: amidohydrolase; KEGG: ara:Arad_9685 hyppurate hydrolase protein; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004117938.1 KEGG: bxe:Bxe_B1829 ABC amino acid transporter, periplasmic ligand binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004117939.1 KEGG: eca:ECA4082 octopine transport system permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004117940.1 KEGG: ara:Arad_8877 octopine ABC transporter; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004117941.1 KEGG: ara:Arad_14165 opine permease ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004117942.1 KEGG: xau:Xaut_1744 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004117943.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pct:PC1_2122 binding-protein-dependent transport systems inner membrane component YP_004117944.1 PFAM: extracellular solute-binding protein family 1; KEGG: pct:PC1_2123 ABC transporter, periplasmic substrate-binding protein, putative YP_004117945.1 KEGG: kpe:KPK_0700 hypothetical protein YP_004117946.1 KEGG: llm:llmg_1814 DnaC protein YP_004117947.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: eta:ETA_33100 putative zinc-binding dehydrogenase YP_004117948.1 PFAM: zinc finger C2H2-type domain protein; KEGG: pay:PAU_03850 insecticial toxin complex YP_004117949.1 PFAM: Protein of unknown function DUF2534; PepSY-associated TM helix domain protein; KEGG: dda:Dd703_1842 PepSY-associated TM helix domain protein YP_004117950.1 KEGG: eta:ETA_16840 hypothetical protein YP_004117951.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: azo:azo0826 glycerate dehydrogenase YP_004117952.1 KEGG: eta:ETA_16980 glutaminase; PFAM: Glutaminase, core YP_004117953.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: pen:PSEEN2914 hypothetical protein YP_004117954.1 PFAM: Cl- channel voltage-gated family protein; KEGG: ses:SARI_02801 chloride channel protein YP_004117955.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: stm:STM3697 putative mandelate racemase YP_004117956.1 KEGG: cro:ROD_42121 putative LacI-family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004117957.1 PFAM: protein of unknown function DUF336; KEGG: avn:Avin_05610 hypothetical protein YP_004117958.1 KEGG: avn:Avin_33640 dehydrogenase cytochrome c subunit; PFAM: cytochrome c class I YP_004117959.1 KEGG: avn:Avin_33650 dehydrogenase flavoprotein subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004117960.1 KEGG: avn:Avin_33660 dehydrogenase small subunit YP_004117961.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: avn:Avin_33680 hypothetical protein YP_004117962.1 KEGG: avn:Avin_33670 LacI family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004117963.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_2395 periplasmic binding protein/LacI transcriptional regulator YP_004117964.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: spe:Spro_3196 oxidoreductase domain-containing protein YP_004117965.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: spe:Spro_3195 xylose isomerase domain-containing protein YP_004117966.1 KEGG: kpe:KPK_2268 monooxygenase, luciferase family; PFAM: Luciferase-like, subgroup YP_004117967.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3850 major facilitator transporter YP_004117968.1 KEGG: dda:Dd703_2608 hypothetical protein YP_004117969.1 PFAM: Cold-shock protein DNA-binding; KEGG: eca:ECA1580 putative cold-shock protein YP_004117970.1 PFAM: Lipocalin family protein; KEGG: kpu:KP1_0684 hypothetical protein YP_004117971.1 manually curated; KEGG: esa:ESA_pESA3p05476 hypothetical protein YP_004117972.1 KEGG: ses:SARI_00034 hypothetical protein YP_004117973.1 KEGG: stm:STM2922 putative 3-polyprenyl-4-hydroxybenzoate decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein YP_004117974.1 KEGG: cko:CKO_04098 hypothetical protein; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_004117975.1 KEGG: cro:ROD_30691 MarR-family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004117976.1 PFAM: alpha/beta hydrolase fold; KEGG: mrd:Mrad2831_0856 alpha/beta hydrolase fold YP_004117977.1 PFAM: fatty acid hydroxylase; KEGG: esa:ESA_00341 hypothetical protein YP_004117978.1 KEGG: ctu:Ctu_35440 phytoene synthase; PFAM: Squalene/phytoene synthase YP_004117979.1 KEGG: ctu:Ctu_35430 phytoene dehydrogenase; TIGRFAM: phytoene desaturase; PFAM: amine oxidase YP_004117980.1 KEGG: esa:ESA_00344 hypothetical protein; TIGRFAM: lycopene cyclase; lycopene cyclase family protein; PFAM: Lycopene beta and epsilon cyclase YP_004117981.1 PFAM: Polyprenyl synthetase; KEGG: ctu:Ctu_35390 geranylgeranyl pyrophosphate synthetase YP_004117983.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: kpe:KPK_4701 D-isomer specific 2-hydroxyacid dehydrogenase family protein YP_004117984.1 PFAM: FAD dependent oxidoreductase; KEGG: cko:CKO_00946 hypothetical protein YP_004117985.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rop:ROP_03440 putative oxidoreductase YP_004117986.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ect:ECIAI39_1747 D-ala-D-ala transporter subunit ; ATP-binding component of ABC superfamily; SMART: AAA ATPase YP_004117987.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: cko:CKO_01521 hypothetical protein; SMART: AAA ATPase YP_004117988.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cko:CKO_01522 ATP-dependent peptide transporter membrane subunit YP_004117989.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebr:ECB_01444 D-ala-D-ala transporter subunit YP_004117990.1 PFAM: extracellular solute-binding protein family 5; KEGG: cko:CKO_01524 hypothetical protein YP_004117991.1 KEGG: cko:CKO_01525 D-alanyl-D-alanine dipeptidase; PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase YP_004117992.1 KEGG: cko:CKO_01526 hypothetical protein YP_004117993.1 KEGG: Chaf1a; chromatin assembly factor 1, subunit A (p150); K10750 chromatin assembly factor 1 subunit A YP_004117994.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mlo:mll1929 alcohol dehydrogenase YP_004117995.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pct:PC1_4145 transcriptional regulator, LysR family YP_004117996.1 SMART: helix-turn-helix domain protein; KEGG: ddc:Dd586_1729 helix-turn-helix domain protein YP_004117997.1 PFAM: major facilitator superfamily MFS_1; KEGG: pae:PA1262 major facilitator transporter YP_004117998.1 KEGG: sgl:SG1935 outer membrane protein assembly factor YaeT; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein YP_004117999.1 KEGG: kpe:KPK_2000 putative sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_004118000.1 PFAM: PfkB domain protein; KEGG: kpe:KPK_2001 kinase, PfkB family YP_004118001.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpe:KPK_2002 putative sugar ABC transporter, permease protein YP_004118002.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpe:KPK_2003 putative sugar ABC transporter, permease protein YP_004118003.1 PFAM: extracellular solute-binding protein family 1; KEGG: kpe:KPK_2004 putative sugar ABC transporter, periplasmic sugar-binding protein YP_004118004.1 PFAM: ROK family protein; KEGG: kpe:KPK_2005 ROK family protein YP_004118005.1 PFAM: dienelactone hydrolase; KEGG: pau:PA14_43840 hypothetical protein YP_004118006.1 KEGG: kpe:KPK_2815 acetyltransferase, GNAT family YP_004118007.1 PFAM: metallophosphoesterase; KEGG: ctu:Ctu_17760 hypothetical protein YP_004118008.1 KEGG: pct:PC1_0235 hypothetical protein YP_004118009.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; Ada metal-binding domain protein; KEGG: pct:PC1_0234 methylated-DNA/protein-cysteine methyltransferase; SMART: Helix-turn-helix, AraC domain YP_004118010.1 PFAM: TOBE domain protein; KEGG: cko:CKO_04088 hypothetical protein YP_004118011.1 KEGG: nmi:NMO_1783 putative permease YP_004118012.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3499 GCN5-related N-acetyltransferase YP_004118013.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rec:RHECIAT_CH0002783 putative amino acid efflux protein, LysE family YP_004118014.1 KEGG: pct:PC1_1466 hypothetical protein YP_004118015.1 PFAM: Protein of unknown function DUF2058; KEGG: pct:PC1_1463 hypothetical protein YP_004118016.1 PFAM: pseudouridine synthase; KEGG: spe:Spro_3940 pseudouridine synthase YP_004118017.1 KEGG: llm:llmg_0458 hypothetical protein YP_004118018.1 KEGG: pag:PLES_41901 putative fosfomycin resistance protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004118019.1 PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: bbt:BBta_0027 putative aspartate/ornithine carbamoyltransferase family protein YP_004118020.1 PFAM: protein of unknown function DUF1203; KEGG: jan:Jann_3595 hypothetical protein YP_004118021.1 KEGG: pct:PC1_1466 hypothetical protein YP_004118022.1 PFAM: Protein of unknown function DUF2058; KEGG: pct:PC1_1463 hypothetical protein YP_004118023.1 PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: ara:Arad_4428 ornithine carbamoyltransferase protein YP_004118024.1 KEGG: pwa:Pecwa_4108 hypothetical protein YP_004118025.1 KEGG: pwa:Pecwa_4109 hypothetical protein YP_004118026.1 PFAM: protein of unknown function DUF323; KEGG: pwa:Pecwa_4110 protein of unknown function DUF323 YP_004118027.1 PFAM: Proline dehydrogenase; KEGG: dze:Dd1591_0210 proline dehydrogenase YP_004118028.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: dze:Dd1591_0211 taurine catabolism dioxygenase TauD/TfdA YP_004118029.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dze:Dd1591_0212 enoyl-CoA hydratase/isomerase YP_004118030.1 PFAM: Domain of unknown function DUF1933; asparagine synthase; KEGG: plu:plu0182 CpmA protein involved in carbapenem biosynthesis YP_004118031.1 KEGG: pay:PAU_00866 hypothetical protein; PFAM: PAS fold-4 domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR YP_004118032.1 PFAM: TraYfamily protein; KEGG: eta:ETA_pET460520 putative TraY protein YP_004118033.1 TIGRFAM: malate/quinone oxidoreductase; KEGG: kpu:KP1_2571 malate:quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase YP_004118034.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1946 GCN5-related N-acetyltransferase YP_004118035.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pct:PC1_0607 transcriptional regulator, LysR family YP_004118036.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: pct:PC1_0608 carboxymuconolactone decarboxylase YP_004118037.1 KEGG: pct:PC1_0609 tautomerase YP_004118038.1 KEGG: kpu:KP1_0265 UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase YP_004118039.1 KEGG: ara:Arad_8658 peptide ABC transporter; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004118040.1 PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: ara:Arad_8667 hypothetical protein YP_004118041.1 PFAM: ROK family protein; regulatory protein MarR; KEGG: ara:Arad_8668 transcriptional regulator protein YP_004118042.1 PFAM: extracellular solute-binding protein family 5; KEGG: rfr:Rfer_3103 extracellular solute-binding protein YP_004118043.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB3711 putative binding-protein-dependent transport permease YP_004118044.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gtn:GTNG_0480 peptide ABC transporter YP_004118045.1 PFAM: ROK family protein; KEGG: oan:Oant_3487 ROK family protein YP_004118046.1 PFAM: plasmid stabilization system; KEGG: pmr:PMIP32 plasmid stabilization protein YP_004118047.1 KEGG: tau:Tola_0040 prevent-host-death family protein; TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172 YP_004118048.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgl:bglu_2g17450 transcriptional regulator, LysR family protein YP_004118049.1 PFAM: Pirin domain protein; KEGG: bcj:BCAS0091 putative pirin family protein YP_004118050.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bbt:BBta_0488 inositol 2-dehydrogenase YP_004118051.1 KEGG: ara:Arad_0110 transcriptional regulator protein; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_004118052.1 PFAM: FAD dependent oxidoreductase; KEGG: eta:ETA_07710 putative amino acid oxidase flavoprotein ThiO YP_004118053.1 KEGG: eta:ETA_07720 thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein YP_004118054.1 PFAM: thiazole biosynthesis family protein; KEGG: eta:ETA_07730 thiazole synthase YP_004118055.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: eta:ETA_07740 thiamine biosynthesis protein ThiF YP_004118056.1 KEGG: azc:AZC_2058 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118057.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hin:HI0355 ABC transporter permease protein YP_004118058.1 PFAM: NMT1/THI5 like domain protein; KEGG: azc:AZC_2056 ABC transporter substrate binding protein YP_004118059.1 PFAM: periplasmic binding protein; KEGG: dda:Dd703_1499 periplasmic binding protein YP_004118060.1 PFAM: putative esterase; KEGG: ddc:Dd586_2815 putative esterase YP_004118061.1 KEGG: dda:Dd703_1491 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004118062.1 KEGG: eta:ETA_17070 hypothetical protein YP_004118063.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bch:Bcen2424_1986 lysine exporter protein LysE/YggA YP_004118064.1 KEGG: eta:ETA_13700 putative transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004118065.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eta:ETA_13710 zinc-containing alcohol dehydrogenase, long-chain YP_004118066.1 PFAM: lambda integrase ; integrase family protein; KEGG: kpe:KPK_2863 site-specific recombinase, phage integrase family YP_004118067.1 KEGG: kpe:KPK_2862 hypothetical protein YP_004118068.1 KEGG: ecv:APECO1_4036 hypothetical protein YP_004118069.1 KEGG: seh:SeHA_C1121 hypothetical protein YP_004118070.1 KEGG: kpe:KPK_3135 hypothetical protein YP_004118071.1 KEGG: psp:PSPPH_2388 hypothetical protein YP_004118072.1 KEGG: hypothetical protein ; K01187 alpha-glucosidase YP_004118073.1 KEGG: amr:AM1_5469 WD repeat-containing protein YP_004118074.1 PFAM: protein of unknown function DUF1317; KEGG: ecs:ECs3003 hypothetical protein YP_004118075.1 KEGG: ddc:Dd586_1069 hypothetical protein YP_004118077.1 KEGG: pay:PAU_03571 hypothetical protein; PFAM: Peptidase S24/S26A/S26B, conserved region; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004118078.1 KEGG: spq:SPAB_02191 hypothetical protein YP_004118079.1 KEGG: ctu:Ctu_17210 hypothetical protein YP_004118080.1 KEGG: ent:Ent638_2617 hypothetical protein YP_004118081.1 PFAM: conserved hypothetical protein; regulatory protein GntR HTH; KEGG: cro:ROD_26171 hypothetical protein YP_004118082.1 KEGG: hbu:Hbut_0707 hypothetical protein YP_004118083.1 PFAM: KorB domain protein; KEGG: eta:ETA_pET450450 hypothetical protein YP_004118084.1 KEGG: dar:Daro_3124 NAD(P) transhydrogenase, beta subunit YP_004118085.1 PFAM: MT-A70 family protein; KEGG: kpe:KPK_4187 adenine-specific DNA methyltransferase YP_004118087.1 PFAM: endodeoxyribonuclease RusA; KEGG: sew:SeSA_A4449 bacteriophage V crossover junction endodeoxyribonuclease YP_004118088.1 KEGG: eoh:ECO103_0526 hypothetical protein; PFAM: protein of unknown function DUF1277; SMART: HNH nuclease YP_004118089.1 PFAM: antitermination Q family protein; KEGG: yen:YE1410 phage antitermination protein Q YP_004118090.1 KEGG: cko:CKO_01879 hypothetical protein YP_004118091.1 KEGG: eoh:ECO103_3120 putative holin; TIGRFAM: phage holin, lambda family; PFAM: Holin phage lambda YP_004118092.1 PFAM: protein of unknown function DUF847; Peptidoglycan binding domain; KEGG: yen:YE1815 hypothetical protein YP_004118093.1 KEGG: net:Neut_1450 hypothetical protein YP_004118094.1 KEGG: sgl:SG1231 hypothetical protein YP_004118095.1 PFAM: protein of unknown function DUF1378; KEGG: ecs:ECs4994 hypothetical protein YP_004118096.1 KEGG: csc:Csac_1466 replicative DNA helicase YP_004118097.1 KEGG: stm:STM1267 putative cytoplasmic protein YP_004118098.1 KEGG: bcy:Bcer98_1152 peptidase M23B YP_004118099.1 KEGG: ecv:APECO1_1027 HnhC; PFAM: HNH endonuclease; SMART: HNH nuclease YP_004118100.1 KEGG: ctu:Ctu_17430 hypothetical protein; TIGRFAM: phage terminase, small subunit, , P27 family; PFAM: terminase small subunit putative P27 YP_004118101.1 PFAM: Terminase; KEGG: ecm:EcSMS35_1186 putative phage terminase, large subunit YP_004118102.1 KEGG: ssn:SSON_2778 hypothetical protein YP_004118103.1 KEGG: sed:SeD_A2269 phage portal protein, HK97 family; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein YP_004118104.1 KEGG: sfv:SFV_0238 putative prohead protease; TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97 YP_004118105.1 KEGG: sew:SeSA_A2263 phage major capsid protein, HK97 family; TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97 YP_004118106.1 KEGG: similar to gamma-aminobutyric acid A receptor, epsilon YP_004118107.1 KEGG: ecm:EcSMS35_1192 hypothetical protein YP_004118108.1 KEGG: ent:Ent638_2233 phage head-tail adaptor, putative; TIGRFAM: phage head-tail adaptor; PFAM: putative head-tail adaptor protein YP_004118109.1 KEGG: esa:ESA_01032 hypothetical protein; TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein YP_004118110.1 KEGG: ent:Ent638_2231 hypothetical protein YP_004118111.1 KEGG: ent:Ent638_2230 phage major tail subunit YP_004118112.1 PFAM: tail assembly chaperone; KEGG: ent:Ent638_2229 phage tail assembly chaperone YP_004118113.1 KEGG: ctu:Ctu_17550 hypothetical protein YP_004118114.1 KEGG: ppg:PputGB1_3397 hypothetical protein YP_004118115.1 KEGG: ent:Ent638_2225 lambda family phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, lambda family; phage tape measure protein; PFAM: Phage tail tape measure protein, conserved region; Tail length tape measure YP_004118116.1 KEGG: ypy:YPK_3100 minor tail family protein; manually curated; PFAM: minor tail family protein YP_004118117.1 KEGG: sgl:SG2190 hypothetical protein; TIGRFAM: phage minor tail protein L; PFAM: minor tail protein L YP_004118118.1 PFAM: NLP/P60 protein; KEGG: esa:ESA_01042 hypothetical protein YP_004118119.1 PFAM: lambda tail assembly I; KEGG: sgl:SG1642 putative phage tail assembly protein YP_004118120.1 PFAM: Protein of unknown function DUF1983; KEGG: ent:Ent638_2219 fibronectin, type III domain-containing protein YP_004118121.1 KEGG: yen:YE2294 phage-like protein YP_004118122.1 KEGG: dps:DP1843 hypothetical protein YP_004118123.1 KEGG: sew:SeSA_A0665 hypothetical protein YP_004118124.1 KEGG: spq:SPAB_01034 hypothetical protein YP_004118125.1 KEGG: kpe:KPK_4113 hypothetical protein YP_004118126.1 KEGG: ecx:EcHS_A2076 hypothetical protein YP_004118127.1 KEGG: kpn:KPN_04699 hypothetical protein YP_004118128.1 KEGG: kpn:KPN_04698 hypothetical protein YP_004118129.1 KEGG: kpn:KPN_04697 hypothetical protein YP_004118130.1 KEGG: ctu:Ctu_28120 hypothetical protein YP_004118131.1 PFAM: Protein of unknown function DUF2137; KEGG: acb:A1S_3469 diaminopimelate decarboxylase YP_004118132.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcj:BCAS0697 LysR family regulatory protein YP_004118133.1 KEGG: ppw:PputW619_2576 zinc-binding alcohol dehydrogenase family protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_004118134.1 KEGG: bcj:BCAS0700 dihydropteridine reductase; PFAM: nitroreductase YP_004118135.1 KEGG: conserved Plasmodium protein YP_004118136.1 KEGG: bpd:BURPS668_A0474 putative lysine-arginine-ornithine-binding periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004118137.1 KEGG: pfo:Pfl01_4763 hypothetical protein YP_004118138.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: mmw:Mmwyl1_0945 hypothetical protein YP_004118139.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_1345 LysR family transcriptional regulator YP_004118140.1 PFAM: amidinotransferase; KEGG: spe:Spro_4680 hypothetical protein YP_004118141.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bcl:ABC0371 formiminoglutamase YP_004118142.1 KEGG: mpt:Mpe_A2881 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004118143.1 KEGG: pst:PSPTO_1827 arginine/ornithine ABC transporter, permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004118144.1 KEGG: asa:ASA_2403 ABC-type amino acid transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004118145.1 KEGG: dra:DR_1029m transcription regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_004118146.1 PFAM: Citrate transporter; KEGG: avn:Avin_43990 sodium/solute symporter protein YP_004118147.1 KEGG: bcj:BCAM2240 AraC family regulatory protein; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004118148.1 PFAM: Protein of unknown function DUF2000; KEGG: bam:Bamb_4422 hypothetical protein YP_004118149.1 KEGG: pwa:Pecwa_4468 hypothetical protein YP_004118150.1 KEGG: mtb:TBMG_02185 PPE family protein YP_004118151.1 KEGG: hypothetical protein YP_004118152.1 PFAM: Amidase; KEGG: bpt:Bpet0288 amidase family protein YP_004118153.1 KEGG: kpe:KPK_3049 metallo-beta-lactamase domain protein YP_004118154.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_3517 LysR family transcriptional regulator YP_004118155.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B0400 putative short-chain dehydrogenase, oxidoreductase YP_004118156.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spe:Spro_2417 LysR family transcriptional regulator YP_004118157.1 KEGG: bph:Bphy_7063 spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_004118158.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mno:Mnod_4262 binding-protein-dependent transport systems inner membrane component YP_004118159.1 PFAM: extracellular solute-binding protein family 1; KEGG: bph:Bphy_7064 extracellular solute-binding protein YP_004118160.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: ara:Arad_9829 beta-glucosidase protein YP_004118161.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_1800 transcriptional regulator, LysR family YP_004118162.1 KEGG: kpe:KPK_1804 hypothetical protein YP_004118163.1 PFAM: Endoribonuclease L-PSP; KEGG: kpe:KPK_1805 endoribonuclease L-PSP family protein YP_004118164.1 PFAM: protein of unknown function DUF1028; KEGG: kpe:KPK_1806 hypothetical protein YP_004118165.1 KEGG: kpe:KPK_1807 acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein YP_004118166.1 KEGG: spe:Spro_3114 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004118167.1 PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_3115 extracellular solute-binding protein YP_004118168.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3116 binding-protein-dependent transport systems inner membrane component YP_004118169.1 KEGG: spe:Spro_3117 ABC transporter-related protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_004118170.1 PFAM: inositol monophosphatase; KEGG: spe:Spro_3118 inositol-phosphate phosphatase YP_004118171.1 KEGG: pap:PSPA7_0516 putative transcriptional regulator; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004118172.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: eta:ETA_33760 transporter, LysE family YP_004118173.1 PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_4452 putative Leu/Ile/Val/Thr/Ala-binding protein YP_004118174.1 PFAM: inner-membrane translocator; KEGG: bbt:BBta_4451 branched chain amino acid ABC transporter permease YP_004118175.1 PFAM: inner-membrane translocator; KEGG: ara:Arad_8299 UreA or short-chain amide ABC transporter YP_004118176.1 KEGG: ara:Arad_8300 UreA or short-chain amide ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118177.1 KEGG: bra:BRADO4072 putative branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118178.1 PFAM: ANTAR domain protein; KEGG: pmy:Pmen_4597 response regulator receiver/ANTAR domain-containing protein YP_004118179.1 KEGG: ppf:Pput_2723 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004118180.1 PFAM: Amidase; KEGG: dac:Daci_5308 amidase YP_004118181.1 KEGG: vap:Vapar_4359 4-oxalocrotonate tautomerase YP_004118182.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cti:RALTA_A2656 putative transcription regulator, LysR family YP_004118183.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_2822 transcriptional regulator, LysR family YP_004118184.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: azo:azo3958 4-carboxymuconolactone decarboxylase YP_004118185.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: pmy:Pmen_2361 acyl-CoA dehydrogenase type 2 YP_004118186.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: ppw:PputW619_4989 acyl-CoA dehydrogenase type 2 YP_004118187.1 KEGG: pmy:Pmen_2363 coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein YP_004118188.1 PFAM: NLPA lipoprotein; KEGG: pag:PLES_29541 putative ABC transporter, periplasmic binding protein YP_004118189.1 KEGG: avn:Avin_31520 ABC transporter, ATP-binding component; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase YP_004118190.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmy:Pmen_2366 binding-protein-dependent transport systems inner membrane component YP_004118191.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_30560 transcriptional regulator, LysR family YP_004118192.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: eta:ETA_30550 probable oxidoreductase/nucleoside-diphosphate-sugar epimerase YP_004118193.1 PFAM: Hok/gef cell toxic protein; KEGG: ecl:EcolC_3639 Hok/gef cell toxic protein YP_004118194.1 KEGG: ent:Ent638_3388 hypothetical protein YP_004118195.1 KEGG: ent:Ent638_3389 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein YP_004118196.1 KEGG: ent:Ent638_3390 cytochrome c biogenesis protein, transmembrane region; PFAM: cytochrome c biogenesis protein transmembrane region YP_004118197.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: ent:Ent638_3391 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004118198.1 KEGG: amt:Amet_4261 hypothetical protein YP_004118199.1 PFAM: HipA domain protein; KEGG: vfi:VF_1470 HipA serine kinase, regulator with HipB, putative TA-system YP_004118200.1 KEGG: ebr:ECB_01470 DNA-binding transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004118201.1 KEGG: ctu:Ctu_03330 biotin carboxyl carrier protein of acetyl-CoA carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_004118202.1 KEGG: eta:ETA_02770 acetyl-CoA carboxylase biotin carboxylase subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein YP_004118203.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: sgl:SG0175 glutamate dehydrogenase YP_004118204.1 PFAM: porin Gram-negative type; KEGG: cko:CKO_02137 outer membrane protein F YP_004118205.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rlg:Rleg_6369 transcriptional regulator, LysR family YP_004118206.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3628 ABC transporter permease protein YP_004118207.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3629 ABC transporter permease protein YP_004118208.1 KEGG: bja:blr3630 ABC transporter substrate-binding protein YP_004118209.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; KEGG: bja:blr3631 ABC transporter ATP-binding protein; SMART: AAA ATPase YP_004118210.1 PFAM: regulatory protein TetR; KEGG: ent:Ent638_0042 TetR family transcriptional regulator YP_004118211.1 KEGG: ent:Ent638_0043 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004118212.1 KEGG: pmy:Pmen_3705 hydroxydechloroatrazine ethylaminohydrolase; PFAM: amidohydrolase YP_004118213.1 PFAM: amidohydrolase; KEGG: kpe:KPK_2302 amidohydrolase YP_004118214.1 PFAM: NMT1/THI5 like domain protein; KEGG: aci:ACIAD1463 binding protein ABC transporter periplasmic substrate-binding protein YP_004118215.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: dac:Daci_1135 2OG-Fe(II) oxygenase YP_004118216.1 PFAM: NLP/P60 protein; KEGG: kpu:KP1_1136 lipoprotein YP_004118217.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sek:SSPA0937 hypothetical protein; SMART: GGDEF domain containing protein YP_004118218.1 PFAM: MscS Mechanosensitive ion channel; KEGG: kpe:KPK_2910 transporter, small conductance mechanosensitive ion channel (MscS) family YP_004118219.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: vpa:VPA0472 putative long-chain fatty acid transport protein YP_004118220.1 KEGG: eoi:ECO111_4484 hypothetical protein YP_004118221.1 PFAM: Radical SAM domain protein; KEGG: vpa:VPA0684 putative arylsulfatase regulator YP_004118222.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: xau:Xaut_3412 NapD-like protein YP_004118223.1 PFAM: sulfatase; KEGG: met:M446_6751 sulfatase YP_004118224.1 KEGG: set:SEN1133 putative phage encoded hydrolase YP_004118225.1 PFAM: protein of unknown function DUF1471; KEGG: yen:YE3996 hypothetical protein YP_004118226.1 KEGG: eca:ECA0935 ferric-rhodotorulic acid outer membrane transporter; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004118227.1 KEGG: ent:Ent638_1057 putative periplasmic protein YP_004118228.1 PFAM: 2-phosphosulfolactate phosphatase; KEGG: spe:Spro_2330 putative lipoprotein YP_004118229.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: avn:Avin_33680 hypothetical protein YP_004118230.1 KEGG: avn:Avin_33690 sugar transporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter YP_004118231.1 KEGG: ecq:ECED1_0301 putative AraC-type DNA-binding domain-containing protein; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004118232.1 KEGG: sen:SACE_4539 sugar transporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter YP_004118233.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: psp:PSPPH_3188 myo-inositol 2-dehydrogenase YP_004118234.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: msu:MS2180 bifunctional fructose-specific PTS IIA/HPr protein YP_004118235.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: avn:Avin_33700 hypothetical protein YP_004118236.1 KEGG: ara:Arad_4479 hypothetical protein YP_004118237.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: ara:Arad_4480 dehydrogenase large subunit protein YP_004118238.1 KEGG: ara:Arad_4481 cytochrome-c oxidase protein; PFAM: cytochrome c class I YP_004118239.1 KEGG: yen:YE1370A putative dehydrogenase subunit YP_004118240.1 PFAM: FAD dependent oxidoreductase; KEGG: har:HEAR2557 glucose dehydrogenase YP_004118241.1 KEGG: ara:Arad_4481 cytochrome-c oxidase protein; PFAM: cytochrome c class I YP_004118242.1 PFAM: regulatory protein TetR; KEGG: dze:Dd1591_2113 transcriptional regulator, TetR family YP_004118243.1 KEGG: kpe:KPK_1527 hypothetical protein YP_004118245.1 PFAM: Antimicrobial peptide resistance and lipid A acylation PagP; KEGG: kpe:KPK_A0097 palmitoyl transferase YP_004118246.1 KEGG: kpe:KPK_1747 hypothetical protein YP_004118247.1 PFAM: cytochrome B561; KEGG: ara:Arad_4775 cytochrome b561 protein YP_004118248.1 PFAM: TPR repeat-containing protein; KEGG: ent:Ent638_3118 TPR repeat-containing protein YP_004118249.1 KEGG: ent:Ent638_3117 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004118250.1 KEGG: ent:Ent638_3116 putative transmembrane anti-sigma factor YP_004118251.1 KEGG: spe:Spro_2529 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118252.1 KEGG: stm:STM2962 putative D-glucarate permease; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1 YP_004118253.1 KEGG: spe:Spro_2396 dimethylargininase; PFAM: amidinotransferase YP_004118254.1 KEGG: eca:ECA3945 hypothetical protein YP_004118255.1 KEGG: kpe:KPK_2505 transcriptional regulator, MarR family/acetyltransferase, GNAT family; PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR YP_004118256.1 KEGG: kpn:KPN_02622 putative DeoR-type transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004118257.1 PFAM: NUDIX hydrolase; KEGG: kpu:KP1_3852 MutT-like protein YP_004118258.1 KEGG: bvi:Bcep1808_0860 hypothetical protein YP_004118259.1 KEGG: kpe:KPK_2819 hypothetical protein YP_004118260.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ppg:PputGB1_3385 lysine exporter protein LysE/YggA YP_004118261.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: avn:Avin_33670 LacI family transcriptional regulator YP_004118262.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpe:KPK_3284 oxidoreductase, short chain dehydrogenase/reductase family YP_004118263.1 KEGG: kpe:KPK_3285 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004118264.1 KEGG: kpe:KPK_3286 amino acid ABC transporter, periplasmic amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004118265.1 KEGG: kpe:KPK_3287 amino acid ABC transporter, permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004118266.1 KEGG: kpe:KPK_3288 amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118267.1 KEGG: kpe:KPK_3289 peptidase, ArgE/DapE family; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004118268.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: kpe:KPK_3290 mandelate racemase/muconate lactonizing enzyme family protein YP_004118269.1 PFAM: creatinase; peptidase M24; KEGG: kpe:KPK_3291 creatinase/peptidase, M24 family YP_004118270.1 PFAM: dihydrodipicolinate synthetase; KEGG: kpe:KPK_3293 dihydrodipicolinate synthetase family protein YP_004118271.1 KEGG: kpe:KPK_3292 CTP synthase family protein; PFAM: glutamine amidotransferase class-I YP_004118272.1 PFAM: aminotransferase class I and II; KEGG: kpe:KPK_3294 aspartate transaminase YP_004118273.1 KEGG: pmy:Pmen_4126 alcohol dehydrogenase; TIGRFAM: formaldehyde dehydrogenase, glutathione-independent; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein YP_004118274.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpe:KPK_B0004 short chain dehydrogenase YP_004118275.1 KEGG: kpe:KPK_B0003 transcriptional regulator, AraC family; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004118276.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bja:bll8307 hypothetical protein YP_004118277.1 KEGG: kpu:KP1_2779 putative acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004118278.1 PFAM: protein of unknown function DUF1355; KEGG: kpe:KPK_2646 hypothetical protein YP_004118279.1 PFAM: aryldialkylphosphatase; KEGG: kpe:KPK_2647 phosphotriesterase family protein YP_004118280.1 PFAM: inner-membrane translocator; KEGG: kpu:KP1_2776 putative ribose/xylose/arabinose/galactoside ABC-type transport system permease component YP_004118281.1 KEGG: kpn:KPN_01732 putative ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118282.1 KEGG: kpu:KP1_2774 periplasmic binding protein/LacI transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004118283.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpu:KP1_2773 putative ABC transport system nucleotide binding/ATPase component YP_004118284.1 PFAM: PfkB domain protein; KEGG: kpn:KPN_01729 carbohydrate kinase YP_004118285.1 PFAM: photosystem I assembly BtpA; KEGG: kpe:KPK_2653 BtpA family protein YP_004118286.1 PFAM: TENA/THI-4 domain protein; KEGG: kpe:KPK_2654 TenA/THI-4 family protein YP_004118287.1 PFAM: Phenolic acid decarboxylase; KEGG: ctu:Ctu_09080 probable phenolic acid decarboxylase YP_004118288.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: esa:ESA_02966 hypothetical protein YP_004118289.1 KEGG: eca:ECA0956 putative acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004118290.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0955 LysR family transcriptional regulator YP_004118291.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: mdi:METDI4464 putative efflux transporter permease, aromatic acid exporter family YP_004118292.1 KEGG: cko:CKO_04382 molybdate ABC transporter periplasmic molybdate-binding protein YP_004118293.1 PFAM: periplasmic binding protein; KEGG: ent:Ent638_3396 periplasmic binding protein YP_004118294.1 KEGG: bid:Bind_0859 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004118295.1 PFAM: periplasmic binding protein; KEGG: pwa:Pecwa_2805 periplasmic binding protein YP_004118296.1 PFAM: iron permease FTR1; KEGG: mpa:MAP1762c hypothetical protein YP_004118297.1 PFAM: Peptidase M75, Imelysin; KEGG: mpa:MAP1761c hypothetical protein YP_004118298.1 KEGG: mpa:MAP1760c hypothetical protein; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase YP_004118299.1 PFAM: protein of unknown function DUF1471; KEGG: ses:SARI_02103 hypothetical protein YP_004118300.1 PFAM: YodA domain protein; KEGG: cro:ROD_12351 putative metal-binding protein YP_004118301.1 KEGG: kpe:KPK_1995 acetylesterase YP_004118302.1 KEGG: yen:YE1370A putative dehydrogenase subunit YP_004118303.1 PFAM: FAD dependent oxidoreductase; KEGG: yen:YE1370 putative dehydrogenase subunit YP_004118304.1 KEGG: spe:Spro_1807 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I YP_004118305.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2498 major facilitator transporter YP_004118306.1 KEGG: kpu:KP1_3272 putative outer membrane lipoprotein; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein YP_004118307.1 PFAM: metallophosphoesterase; KEGG: psp:PSPPH_2766 Ser/Thr protein phosphatase family protein YP_004118308.1 KEGG: bph:Bphy_6405 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004118309.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bph:Bphy_6404 GCN5-related N-acetyltransferase YP_004118310.1 PFAM: alpha/beta hydrolase fold; KEGG: bpy:Bphyt_1084 alpha/beta hydrolase fold YP_004118311.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_B2695 LysR family transcriptional regulator YP_004118312.1 KEGG: plu:plu4297 hypothetical protein; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004118313.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: plu:plu4298 hypothetical protein YP_004118314.1 SMART: Pyrrolo-quinoline quinone beta-propeller repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; KEGG: spe:Spro_3100 quinoprotein glucose dehydrogenase; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone YP_004118315.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: ddc:Dd586_2913 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_004118316.1 TIGRFAM: amidohydrolase; KEGG: ddc:Dd586_2912 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004118317.1 KEGG: ddc:Dd586_2911 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004118318.1 PFAM: Extracellular ligand-binding receptor; KEGG: dda:Dd703_1830 extracellular ligand-binding receptor YP_004118319.1 PFAM: inner-membrane translocator; KEGG: dda:Dd703_1829 inner-membrane translocator YP_004118320.1 PFAM: inner-membrane translocator; KEGG: ddc:Dd586_2908 inner-membrane translocator YP_004118321.1 KEGG: ddc:Dd586_2907 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118322.1 KEGG: dda:Dd703_1826 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118323.1 KEGG: dda:Dd703_1825 hypothetical protein YP_004118324.1 PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; flagellin hook IN repeat protein; KEGG: ecc:c2339 flagellar capping protein YP_004118326.1 KEGG: kpe:KPK_A0116 hypothetical protein YP_004118327.1 KEGG: dze:Dd1591_2648 integrase catalytic region; manually curated; PFAM: Integrase catalytic region YP_004118328.1 PFAM: secretion protein HlyD family protein; KEGG: spe:Spro_0115 secretion protein HlyD family protein YP_004118329.1 KEGG: spe:Spro_0114 hypothetical protein YP_004118330.1 KEGG: cro:ROD_44021 regulatory protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_004118331.1 KEGG: esa:ESA_04321 hypothetical protein; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_004118332.1 TIGRFAM: 4-alpha-glucanotransferase; KEGG: esa:ESA_04322 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77 YP_004118333.1 PFAM: Maltose operon periplasmic; KEGG: cko:CKO_03878 maltose regulon periplasmic protein YP_004118334.1 PFAM: porin LamB type; KEGG: sea:SeAg_B4488 maltoporin YP_004118335.1 KEGG: stm:STM4230 maltose/maltodextrin transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_004118336.1 PFAM: extracellular solute-binding protein family 1; KEGG: cko:CKO_03881 maltose ABC transporter periplasmic protein YP_004118337.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: elf:LF82_1258 maltose transport system permease protein MalF YP_004118338.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stm:STM4227 maltose transporter permease YP_004118339.1 PFAM: HipA domain protein; KEGG: tau:Tola_1870 HipA domain protein YP_004118340.1 KEGG: tau:Tola_1871 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004118341.1 KEGG: pfl:PFL_1368 hypothetical protein YP_004118342.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: psb:Psyr_3932 cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K YP_004118343.1 KEGG: psp:PSPPH_3930 hypothetical protein YP_004118344.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: psb:Psyr_3934 short-chain dehydrogenase/reductase SDR YP_004118345.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pfs:PFLU1075 putative dehydrogenase YP_004118346.1 PFAM: major facilitator superfamily MFS_1; KEGG: ypb:YPTS_1695 major facilitator transporter YP_004118347.1 PFAM: polysaccharide deacetylase; KEGG: psp:PSPPH_3934 polysaccharide deacetylase family protein YP_004118348.1 KEGG: psp:PSPPH_3936 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004118349.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_4723 major facilitator superfamily MFS_1 YP_004118350.1 KEGG: bpt:Bpet0279 L-lactate dehydrogenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase YP_004118351.1 PFAM: alanine racemase domain protein; KEGG: pwa:Pecwa_2558 alanine racemase domain protein YP_004118352.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ddc:Dd586_2527 pyridoxal-5'-phosphate-dependent protein beta subunit YP_004118353.1 PFAM: YheO domain protein; KEGG: pct:PC1_2249 YheO domain protein YP_004118354.1 KEGG: eta:ETA_23770 putative transport/receptor protein YP_004118355.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eta:ETA_23780 putative inner membrane protein YP_004118356.1 PFAM: glycosyl transferase family 39; KEGG: eta:ETA_23790 4-amino-4-deoxy-L-arabinose transferase YP_004118357.1 PFAM: polysaccharide deacetylase; KEGG: ent:Ent638_2076 polysaccharide deacetylase YP_004118358.1 PFAM: NAD-dependent epimerase/dehydratase; formyl transferase domain protein; KEGG: kpn:KPN_03845 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase YP_004118359.1 PFAM: glycosyl transferase family 2; KEGG: kpn:KPN_03846 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase YP_004118360.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: kpe:KPK_0266 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase YP_004118362.1 KEGG: eta:ETA_07820 type IV-A prepilin peptidase PilD; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV YP_004118363.1 KEGG: pwa:Pecwa_2355 2,4-diaminobutyrate 4-transaminase; TIGRFAM: 2,4-diaminobutyrate 4-transaminase; PFAM: aminotransferase class-III YP_004118364.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: spe:Spro_2418 pyridoxal-dependent decarboxylase YP_004118365.1 PFAM: aminotransferase class I and II; KEGG: dia:Dtpsy_0113 aminotransferase class I and II YP_004118366.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ret:RHE_PC00205 LysR family transcriptional regulator YP_004118367.1 PFAM: aldo/keto reductase; KEGG: kpn:KPN_03272 putative aldo/keto reductase YP_004118368.1 PFAM: glycosyl transferase group 1; KEGG: acb:A1S_0058 glycosyltransferase YP_004118369.1 KEGG: ypb:YPTS_1109 23S rRNA pseudouridine synthase F; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004118370.1 KEGG: ddc:Dd586_0423 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type YP_004118371.1 PFAM: Protein of unknown function DUF2000; KEGG: ctu:Ctu_15260 hypothetical protein YP_004118372.1 KEGG: ent:Ent638_3529 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_004118373.1 PFAM: B3/4 domain protein; KEGG: asa:ASA_0461 hypothetical protein YP_004118374.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1379 GCN5-related N-acetyltransferase YP_004118375.1 PFAM: NUDIX hydrolase; KEGG: ilo:IL0305 MutT/NUDIX family protein YP_004118376.1 PFAM: protein of unknown function DUF1543; KEGG: pct:PC1_0545 hypothetical protein YP_004118377.1 PFAM: major facilitator superfamily MFS_1; KEGG: ppw:PputW619_4522 major facilitator transporter YP_004118378.1 KEGG: zmo:ZMO0054 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004118379.1 PFAM: cytochrome B561; KEGG: pct:PC1_0697 cytochrome b561 YP_004118380.1 KEGG: pct:PC1_1419 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004118381.1 PFAM: Methyltransferase type 12; KEGG: eca:ECA1544 putative methyltransferase YP_004118382.1 PFAM: protein of unknown function DUF419; KEGG: pst:PSPTO_3016 hypothetical protein YP_004118383.1 KEGG: pct:PC1_2086 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer YP_004118384.1 KEGG: eca:ECA0444 antitoxin YefM; TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172 YP_004118385.1 KEGG: sbc:SbBS512_E1215 toxin YoeB; TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB YP_004118386.1 PFAM: protein of unknown function DUF336; KEGG: spe:Spro_2088 hypothetical protein YP_004118387.1 KEGG: gdj:Gdia_1159 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I YP_004118388.1 PFAM: FAD dependent oxidoreductase; glucose-methanol-choline oxidoreductase; KEGG: zmo:ZMO0787 glucose-methanol-choline oxidoreductase YP_004118389.1 KEGG: zmn:Za10_0496 hypothetical protein YP_004118390.1 PFAM: protein of unknown function DUF336; KEGG: spe:Spro_2088 hypothetical protein YP_004118391.1 PFAM: DoxX family protein; KEGG: eta:ETA_29120 putative membrane-associated protein YqjF YP_004118392.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: vei:Veis_2905 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_004118393.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: dac:Daci_1382 dimethylmenaquinone methyltransferase YP_004118394.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_4015 major facilitator superfamily MFS_1 YP_004118396.1 KEGG: cbe:Cbei_1103 hypothetical protein YP_004118397.1 KEGG: hypothetical protein YP_004118398.1 PFAM: acyltransferase 3; KEGG: par:Psyc_0638 acyltransferase family protein YP_004118399.1 KEGG: rru:Rru_A0863 ABC transporter, transmembrane region; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004118400.1 KEGG: rru:Rru_A0864 ABC transporter, transmembrane region; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004118401.1 KEGG: rso:RSc1812 hypothetical protein YP_004118402.1 KEGG: spe:Spro_2337 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004118403.1 KEGG: pct:PC1_1436 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004118404.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: yen:YE0583 hypothetical protein YP_004118405.1 PFAM: YebG family protein; KEGG: ent:Ent638_1887 YebG family protein YP_004118406.1 KEGG: psa:PST_1577 Sir2 family NAD-dependent protein deacetylase YP_004118407.1 PFAM: Ham1 family protein; KEGG: psa:PST_1578 nucleoside-triphosphatase YP_004118408.1 PFAM: Methyltransferase type 11; KEGG: fra:Francci3_2762 putative methyltransferase YP_004118409.1 PFAM: cytochrome P450; KEGG: sco:SCO0583 cytochrome P450 YP_004118410.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eta:ETA_12380 putative acetyltransferase YP_004118411.1 KEGG: ent:Ent638_2090 hypothetical protein YP_004118412.1 TIGRFAM: amidohydrolase; KEGG: kpe:KPK_2452 amidohydrolase family protein; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004118413.1 KEGG: eta:ETA_12410 putative luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup YP_004118414.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mms:mma_2812 esterase/lipase YP_004118415.1 PFAM: extracellular solute-binding protein family 5; KEGG: kpn:KPN_01854 nickel ABC transporter periplasmic substrate-binding protein YP_004118416.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_01855 peptide ABC transporter membrane protein YP_004118417.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpu:KP1_2919 ABC-type transporter permease component YP_004118418.1 KEGG: kpe:KPK_2499 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004118419.1 PFAM: Luciferase-like, subgroup; KEGG: kpu:KP1_2921 putative monooxygenase YP_004118420.1 KEGG: dze:Dd1591_0028 uncharacterized peroxidase-related enzyme; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004118421.1 TIGRFAM: amidohydrolase; KEGG: eta:ETA_12400 putative peptidase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004118422.1 KEGG: dda:Dd703_1825 hypothetical protein YP_004118423.1 KEGG: eta:ETA_14530 hypothetical protein YP_004118424.1 KEGG: cko:CKO_01954 ferric-rhodotorulic acid outer membrane transporter; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004118425.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: smd:Smed_5902 LysR family transcriptional regulator YP_004118426.1 PFAM: major royal jelly protein; KEGG: mrd:Mrad2831_4434 hypothetical protein YP_004118427.1 KEGG: pap:PSPA7_6266 putative citrate transporter; TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter YP_004118428.1 KEGG: eta:ETA_07650 DNA-binding protein H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_004118429.1 PFAM: ThiJ/PfpI domain protein; KEGG: bcj:BCAM2576 putative ThiJ/PfpI family protein YP_004118430.1 PFAM: aminotransferase class I and II; KEGG: kpe:KPK_1829 aspartate transaminase YP_004118431.1 KEGG: kpe:KPK_1828 nitrilotriacetate monooxygenase, component A YP_004118432.1 PFAM: 3-dehydroquinate synthase; KEGG: kpe:KPK_1827 putative glycerol dehydrogenase YP_004118433.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kpe:KPK_1825 acetyltransferase, GNAT family YP_004118434.1 TIGRFAM: amidohydrolase; KEGG: kpe:KPK_1824 amidohydrolase family protein; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004118435.1 PFAM: MmgE/PrpD family protein; KEGG: kpe:KPK_1822 MmgE/PrpD family protein YP_004118436.1 PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; KEGG: bbr:BB1545 putative biotin sulfoxide reductase YP_004118437.1 KEGG: kpe:KPK_1823 amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118438.1 KEGG: kpe:KPK_1821 amino acid ABC transporter, permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004118439.1 KEGG: kpe:KPK_1820 amino acid ABC transporter, periplasmic amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004118440.1 KEGG: kpu:KP1_2278 TonB dependent outer membrane siderophore receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor YP_004118441.1 KEGG: eca:ECA1561 quorum-sensing transcriptional regulator; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR YP_004118442.1 KEGG: hde:HDEF_0874 autoinducer response regulator; PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; SMART: regulatory protein LuxR YP_004118443.1 KEGG: stp:Strop_1748 GCN5-related N-acetyltransferase YP_004118444.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: pay:PAU_02211 histidine decarboxylase (fragment) YP_004118445.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bch:Bcen2424_1363 LysR family transcriptional regulator YP_004118446.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pst:PSPTO_3232 hypothetical protein YP_004118447.1 KEGG: bph:Bphy_3911 LacI family transcription regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_004118448.1 KEGG: mlo:mlr1006 rhizopine catabolism protein ModC; PFAM: Xylose isomerase domain protein TIM barrel YP_004118449.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: kpe:KPK_4084 oxidoreductase, NAD binding YP_004118450.1 PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_2211 putative hydrolase YP_004118451.1 PFAM: regulatory protein TetR; KEGG: cti:RALTA_A1400 putative transcriptional regulator, TetR family YP_004118452.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: aha:AHA_1984 putative transporter YP_004118453.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: cko:CKO_02841 hypothetical protein YP_004118454.1 PFAM: periplasmic binding protein; KEGG: ypb:YPTS_3362 periplasmic binding protein YP_004118455.1 TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; KEGG: esa:ESA_pESA3p05542 hypothetical protein; SMART: alpha amylase catalytic sub domain YP_004118456.1 TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; KEGG: esa:ESA_pESA3p05541 hypothetical protein; SMART: alpha amylase catalytic sub domain YP_004118457.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: esa:ESA_pESA3p05540 hypothetical protein; SMART: alpha amylase catalytic sub domain YP_004118458.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ent:Ent638_2040 LysR family transcriptional regulator YP_004118459.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ent:Ent638_2039 short-chain dehydrogenase/reductase SDR YP_004118460.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mno:Mnod_2717 short-chain dehydrogenase/reductase SDR YP_004118461.1 KEGG: mno:Mnod_2715 cupin 2, conserved barrel YP_004118462.1 PFAM: major facilitator superfamily MFS_1; KEGG: msm:MSMEG_2549 major facilitator superfamily protein YP_004118463.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: reu:Reut_B3845 (S)-2-hydroxy-acid oxidase YP_004118464.1 KEGG: avn:Avin_33670 LacI family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004118465.1 KEGG: mpo:Mpop_4203 hypothetical protein YP_004118466.1 KEGG: mpo:Mpop_4202 gluconate 2-dehydrogenase (acceptor); PFAM: FAD dependent oxidoreductase YP_004118467.1 KEGG: mpo:Mpop_4201 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I YP_004118468.1 PFAM: Methyltransferase type 12; KEGG: eta:ETA_25830 hypothetical protein YP_004118469.1 PFAM: conserved hypothetical protein; KEGG: spe:Spro_4666 hypothetical protein YP_004118470.1 KEGG: cko:CKO_02650 putative ABC transporter ATP-binding protein YbbL; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118472.1 PFAM: formyl transferase domain protein; KEGG: eta:ETA_23810 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase YP_004118473.1 KEGG: reu:Reut_A3424 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004118474.1 PFAM: acriflavin resistance protein; KEGG: har:HEAR1043 multidrug ABC transporter membrane protein YP_004118475.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dar:Daro_2259 two component heavy metal response transcriptional regulator; SMART: response regulator receiver YP_004118476.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: gme:Gmet_0527 heavy metal sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004118477.1 KEGG: transmembrane protein YP_004118478.1 KEGG: gme:Gmet_0690 undecaprenyl-diphosphatase; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_004118479.1 PFAM: protein of unknown function DUF347; KEGG: sfr:Sfri_3899 hypothetical protein YP_004118480.1 KEGG: msm:MSMEG_5547 hypothetical protein YP_004118481.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: esa:ESA_04153 putative transporter YP_004118482.1 PFAM: glycoside hydrolase family 31; KEGG: stm:STM0041 putative glycosyl hydrolase YP_004118483.1 KEGG: sen:SACE_3501 acetyltransferase YP_004118484.1 KEGG: dze:Dd1591_0100 transcriptional regulator, LuxR family; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR YP_004118485.1 PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative-like; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: kpu:KP1_5415 putative dehydrogenase YP_004118486.1 PFAM: protein of unknown function DUF453; KEGG: spe:Spro_2090 hypothetical protein YP_004118487.1 KEGG: ypb:YPTS_0082 hypothetical protein; TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase YP_004118488.1 PFAM: LmbE family protein; KEGG: ypb:YPTS_0083 LmbE family protein YP_004118489.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yps:YPTB0080 transcriptional regulator YP_004118490.1 KEGG: ctu:Ctu_18880 formate hydrogenlyase transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; GAF domain protein YP_004118491.1 KEGG: eca:ECA1231 hydrogenase isoenzyme formation protein; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004118492.1 KEGG: cko:CKO_04085 hypothetical protein; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein YP_004118493.1 KEGG: cro:ROD_30831 hydrogenase isoenzymes formation protein; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC) YP_004118494.1 KEGG: ent:Ent638_3200 hydrogenase nickel incorporation protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K YP_004118495.1 KEGG: cko:CKO_04082 hydrogenase nickel incorporation protein; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA YP_004118496.1 KEGG: stm:STM2853 formate hydrogenlyase regulatory protein HycA YP_004118497.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sec:SC2785 hydrogenase-3, iron-sulfur subunit (part of FHL complex) YP_004118498.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: cko:CKO_04078 formate hydrogenlyase subunit 3 YP_004118499.1 KEGG: ent:Ent638_3195 respiratory-chain NADH dehydrogenase, subunit 1 YP_004118500.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; nickel-dependent hydrogenase large subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: ctu:Ctu_18980 formate hydrogenlyase subunit 5 YP_004118501.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sbc:SbBS512_E3156 formate hydrogenlyase complex iron-sulfur subunit YP_004118502.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: see:SNSL254_A3050 formate hydrogenlyase, subunit G YP_004118503.1 PFAM: formate hydrogenlyase maturation HycH; KEGG: cko:CKO_04073 hypothetical protein YP_004118504.1 KEGG: sdy:SDY_2914 hydrogenase 3 maturation protease; TIGRFAM: hydrogenase maturation protease HycI; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein YP_004118505.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sed:SeD_A3152 electron transport protein HydN YP_004118506.1 KEGG: ctu:Ctu_19050 formate dehydrogenase H; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_004118507.1 KEGG: ecm:EcSMS35_2835 [NiFe] hydrogenase maturation protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein YP_004118508.1 KEGG: kpu:KP1_4313 putative high-affinity nickel-transporter; TIGRFAM: high-affinity nickel-transporter; PFAM: high-affinity nickel-transporter YP_004118509.1 KEGG: azc:AZC_2718 hypothetical protein YP_004118510.1 KEGG: azc:AZC_2719 GMC oxidoreductase; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase YP_004118511.1 KEGG: mpo:Mpop_4201 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I YP_004118512.1 KEGG: ctu:Ctu_14840 hydroxylamine reductase; TIGRFAM: hybrid cluster protein; PFAM: Prismane YP_004118513.1 PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: efe:EFER_1017 HCP oxidoreductase, NADH-dependent YP_004118514.1 KEGG: rle:pRL100133 IclR family transcriptional regulatory protein; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004118515.1 KEGG: atc:AGR_pAT_197 succinate-semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004118516.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: rle:pRL100135 putative 1,3-propanediol dehydrogenase YP_004118517.1 KEGG: atc:AGR_pAT_200 hypothetical protein YP_004118518.1 PFAM: major facilitator superfamily MFS_1; KEGG: cro:ROD_31611 major facilitator superfamily transporter YP_004118519.1 PFAM: Carbohydrate-selective porin OprB; KEGG: kpn:KPN_02580 putative carbohydrate-selective porin YP_004118520.1 TIGRFAM: amidohydrolase; KEGG: cti:RALTA_B1819 hippurate hydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004118521.1 PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B5813 major facilitator transporter YP_004118522.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_A3287 LysR family transcriptional regulator YP_004118523.1 PFAM: protein of unknown function UPF0118; KEGG: cko:CKO_01609 putative transport protein YP_004118524.1 KEGG: ent:Ent638_2565 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_004118526.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: kpe:KPK_3785 efflux transporter, RND family, MFP subunit YP_004118527.1 PFAM: acriflavin resistance protein; KEGG: kpn:KPN_00786 putative AcrB, cation/multidrug efflux pump YP_004118528.1 KEGG: kpe:KPK_3787 hypothetical protein YP_004118529.1 PFAM: protein of unknown function DUF1428; KEGG: cko:CKO_02698 hypothetical protein YP_004118530.1 KEGG: plu:plu4182 insecticidal toxin complex protein TccC6 YP_004118531.1 KEGG: pgi:PG1449 hypothetical protein YP_004118532.1 PFAM: AIG2 family protein; KEGG: kpe:KPK_2039 hypothetical protein YP_004118533.1 KEGG: bbt:BBta_6216 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_004118534.1 KEGG: pen:PSEEN3031 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004118535.1 KEGG: ecg:E2348C_1592 hypothetical protein YP_004118536.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cro:ROD_22831 colicin I TonB-dependent receptor YP_004118537.1 PFAM: putative esterase; KEGG: pdi:BDI_2007 putative xylanase YP_004118538.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_12425 peptide transport system permease protein YP_004118539.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_12426 oligopeptide ABC transporter permease protein YP_004118540.1 KEGG: ara:Arad_12427 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004118541.1 PFAM: extracellular solute-binding protein family 5; KEGG: ara:Arad_12429 extracellular solute-binding protein YP_004118542.1 KEGG: msm:MSMEG_4540 hypothetical protein YP_004118543.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_4123 monooxygenase YP_004118544.1 KEGG: msm:MSMEG_4539 alkanesulfonate monooxygenase YP_004118545.1 KEGG: msm:MSMEG_2045 monoxygenase YP_004118546.1 KEGG: mno:Mnod_0403 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004118547.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msm:MSMEG_1086 ABC transporter permease protein YP_004118548.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msm:MSMEG_1085 dipeptide transport system permease protein DppB YP_004118549.1 PFAM: extracellular solute-binding protein family 5; KEGG: msm:MSMEG_1084 peptide/opine/nickel uptake family protein ABC transporter, periplasmic substrate-binding protein, putative YP_004118550.1 KEGG: mpa:MAP3226c hypothetical protein YP_004118551.1 PFAM: low temperature requirement A; KEGG: bid:Bind_1086 low temperature requirement A YP_004118552.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ctu:Ctu_34990 malonate utilization transcriptional regulator YP_004118553.1 KEGG: ctu:Ctu_35000 hypothetical protein; TIGRFAM: malonate decarboxylase, epsilon subunit; PFAM: Acyl transferase YP_004118554.1 TIGRFAM: holo-ACP synthase, malonate decarboxylase-specific; KEGG: cko:CKO_04763 phosphoribosyl-dephospho-CoA transferase; PFAM: Holo-ACP synthase, malonate decarboxylase-specific YP_004118555.1 KEGG: cro:ROD_44621 putative malonate transporter MdcF; TIGRFAM: auxin efflux carrier; PFAM: Auxin Efflux Carrier YP_004118556.1 KEGG: ses:SARI_04161 hypothetical protein; TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit YP_004118557.1 TIGRFAM: malonate decarboxylase, beta subunit; KEGG: ctu:Ctu_35040 hypothetical protein YP_004118558.1 KEGG: kpu:KP1_2579 malonate decarboxylase delta subunit; TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase delta subunit YP_004118559.1 TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; KEGG: ctu:Ctu_35060 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-As ynthase; PFAM: triphosphoribosyl-dephospho-CoA protein YP_004118560.1 TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: kpe:KPK_2894 malonate decarboxylase, alpha subunit YP_004118561.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tte:TTE2131 NADH:flavin oxidoreductase YP_004118563.1 PFAM: Na+/solute symporter; KEGG: smf:Smon_0552 sodium/pantothenate symporter YP_004118564.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ser:SERP2045 short chain dehydrogenase YP_004118565.1 PFAM: aminotransferase class I and II; KEGG: mta:Moth_1955 aminotransferase YP_004118566.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: cbt:CLH_0324 cyclic nucleotide-binding domain protein YP_004118567.1 PFAM: HpcH/HpaI aldolase; KEGG: rop:ROP_05100 putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YP_004118568.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: ajs:Ajs_3082 CMP/dCMP deaminase, zinc-binding YP_004118569.1 KEGG: pfo:Pfl01_2729 xanthine/uracil permease; TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_004118570.1 KEGG: mms:mma_1238 LysR family transcriptional regulator; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR YP_004118571.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: sfu:Sfum_2098 carboxymuconolactone decarboxylase YP_004118572.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vei:Veis_1855 LysR family transcriptional regulator YP_004118573.1 KEGG: kpe:KPK_3392 cyclic diguanylate phosphodiesterase (EAL) domain protein; PFAM: EAL domain protein; GAF domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein YP_004118574.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpu:KP1_2423 putative short-chain alcohol dehydrogenas YP_004118575.1 KEGG: yen:YE3581 hypothetical protein YP_004118576.1 TIGRFAM: methionine aminopeptidase, type I; KEGG: yen:YE3582 methionine aminopeptidase; PFAM: peptidase M24 YP_004118577.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: sal:Sala_0240 peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A YP_004118578.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpu:KP1_2708 putative LysR-family bacterial regulatory protein YP_004118579.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: kpe:KPK_2713 Rieske 2Fe-2S domain protein YP_004118580.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: kpu:KP1_2706 putative oxidoreductase YP_004118581.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cko:CKO_01442 hypothetical protein YP_004118582.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cko:CKO_01441 hypothetical protein YP_004118583.1 PFAM: NUDIX hydrolase; KEGG: pwa:Pecwa_1370 NUDIX hydrolase YP_004118584.1 PFAM: Stress-induced protein, KGG, repeat; KEGG: ctu:Ctu_21900 uncharacterized protein YmdF YP_004118585.1 KEGG: mpo:Mpop_4201 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I YP_004118586.1 KEGG: mpo:Mpop_4202 gluconate 2-dehydrogenase (acceptor); PFAM: monooxygenase FAD-binding YP_004118587.1 KEGG: mpo:Mpop_4203 hypothetical protein YP_004118588.1 KEGG: kpe:KPK_4080 putative transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_004118589.1 PFAM: OsmC family protein; KEGG: reu:Reut_B4740 OsmC-like protein YP_004118590.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE2 domain protein; KEGG: dda:Dd703_1224 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004118591.1 KEGG: esa:ESA_01890 hypothetical protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004118592.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: mta:Moth_0208 Asp/Glu racemase YP_004118593.1 KEGG: kpu:KP1_2826 putative beta-ketoacyl synthase; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase YP_004118594.1 KEGG: kpn:KPN_01776 multidrug resistance protein membrane translocase; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004118595.1 PFAM: secretion protein HlyD family protein; KEGG: kpe:KPK_2595 auxiliary transport protein, membrane fusion protein (MFP) family YP_004118596.1 PFAM: helix-turn-helix HxlR type; KEGG: kpu:KP1_2823 putative transcriptional regulator YP_004118597.1 KEGG: xac:XAC2362 hypothetical protein YP_004118598.1 KEGG: spe:Spro_0577 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004118599.1 KEGG: spe:Spro_0576 cellobiose/arbutin/salicin-specific PTS system components IIBC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004118600.1 PFAM: glycoside hydrolase family 1; KEGG: spe:Spro_0575 cryptic 6-phospho-beta-glucosidase YP_004118601.1 manually curated; KEGG: kko:Kkor_1252 hypothetical protein YP_004118602.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: eta:ETA_34140 alcohol dehydrogenase YP_004118603.1 PFAM: helix-turn-helix HxlR type; KEGG: avi:Avi_3780 transcriptional regulator protein YP_004118604.1 SMART: helix-turn-helix domain protein; KEGG: rpa:RPA2481 XRE family transcriptional regulator YP_004118605.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bxe:Bxe_B0546 putative epimerase/dehydratase YP_004118606.1 KEGG: eta:ETA_30450 sugar phosphatase SupH; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004118607.1 PFAM: regulatory protein TetR; KEGG: rlg:Rleg_2525 transcriptional regulator, TetR family YP_004118608.1 PFAM: O-methyltransferase family 3; KEGG: cak:Caul_4857 O-methyltransferase family protein YP_004118609.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_3256 transcriptional regulator, LysR family YP_004118610.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: kpe:KPK_3257 NAD-dependent epimerase/dehydratase family protein YP_004118611.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_4863 transcriptional regulator, LysR family YP_004118612.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bbe:BBR47_06280 hypothetical protein YP_004118613.1 PFAM: C4-dicarboxylate anaerobic carrier-like; KEGG: bac:BamMC406_5568 C4-dicarboxylate anaerobic carrier YP_004118614.1 KEGG: ent:Ent638_4308 type IV secretory pathway VirD4 components-like protein; TIGRFAM: type IV conjugative transfer system coupling protein TraD; PFAM: Type IV secretion-system, TraD, DNA-binding domain; TRAG family protein YP_004118615.1 KEGG: ent:Ent638_4309 exonuclease V subunit alpha; TIGRFAM: conjugative transfer relaxase protein TraI; conjugative relaxase domain protein; PFAM: TrwC relaxase; DNA helicase TraI YP_004118616.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: xac:XAC2362 hypothetical protein YP_004118617.1 KEGG: pfo:Pfl01_2765 integrase catalytic subunit; manually curated; PFAM: Integrase catalytic region YP_004118618.1 KEGG: pwa:Pecwa_1082 type VI secretion-associated protein, VC_A0119 family YP_004118619.1 KEGG: ddc:Dd586_1919 putative DNA-damage-inducible protein J YP_004118620.1 KEGG: pfs:PFLU3992 putative gluconokinase YP_004118621.1 PFAM: Integrase catalytic region; KEGG: dze:Dd1591_2648 integrase catalytic region YP_004118622.1 PFAM: Integrase catalytic region; KEGG: kpn:KPN_pKPN3p05906 Sea24 YP_004118623.1 PFAM: Integrase catalytic region; transposase IS3/IS911 family protein; KEGG: aeh:Mlg_1532 integrase catalytic subunit YP_004118624.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_4059 LysR family transcriptional regulator YP_004118625.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mfa:Mfla_2632 LysR family transcriptional regulator YP_004118626.1 PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bav:BAV0615 oxidoreductase YP_004118627.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: min:Minf_2332 ring-hydroxylating dioxygenase, large terminal subunit YP_004118628.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: pjd:Pjdr2_3009 Rieske (2Fe-2S) domain protein YP_004118629.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpf:Rpic12D_4149 binding-protein-dependent transport systems inner membrane component YP_004118630.1 KEGG: mtp:Mthe_0218 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118631.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_0809 binding-protein-dependent transport systems inner membrane component YP_004118632.1 PFAM: NMT1/THI5 like domain protein; KEGG: azc:AZC_2472 periplasmic substrate-binding protein YP_004118633.1 KEGG: smd:Smed_5726 beta-lactamase-like protein YP_004118634.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: rle:pRL120597 hypothetical protein YP_004118635.1 KEGG: maq:Maqu_0444 L-ectoine synthase YP_004118636.1 PFAM: monooxygenase FAD-binding; KEGG: reu:Reut_B5646 hypothetical protein YP_004118637.1 PFAM: isochorismatase hydrolase; KEGG: rha:RHA1_ro10206 phthalate ester hydrolase (isochorismatase hydrolase) YP_004118638.1 KEGG: cak:Caul_3714 hypothetical protein YP_004118639.1 KEGG: pap:PSPA7_4855 putative transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004118640.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pap:PSPA7_4854 hypothetical protein YP_004118641.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ace:Acel_0883 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004118642.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: kse:Ksed_02670 predicted permease, DMT superfamily YP_004118643.1 PFAM: isochorismatase hydrolase; KEGG: vap:Vapar_4851 isochorismatase hydrolase YP_004118644.1 KEGG: sbc:SbBS512_E0608 hypothetical protein YP_004118645.1 KEGG: plu:plu0126 hypothetical protein YP_004118646.1 KEGG: ses:SARI_02398 hypothetical protein YP_004118647.1 PFAM: cytochrome P450; KEGG: mgi:Mflv_1908 cytochrome P450 YP_004118648.1 KEGG: fre:Franean1_3554 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004118649.1 KEGG: ppu:PP_2596 ABC transporter, permease/ATP-binding protein, putative; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004118650.1 KEGG: cms:CMS_0798 putative nucleotide-binding ABC transporter subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118651.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sro:Sros_3758 binding-protein-dependent transport systems inner membrane component YP_004118652.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_3073 binding-protein-dependent transport systems inner membrane component YP_004118653.1 PFAM: extracellular solute-binding protein family 5; KEGG: cdi:DIP2162 ABC transporter solute-binding protein YP_004118654.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pde:Pden_1427 TonB-dependent receptor YP_004118655.1 KEGG: dac:Daci_3532 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004118656.1 KEGG: yen:YE2612 salicylate synthase Irp9; TIGRFAM: salicylate synthase; PFAM: Chorismate binding-like YP_004118657.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sen:SACE_2694 2,3-dihydroxybenzoate-AMP ligase YP_004118658.1 PFAM: Methyltransferase type 12; KEGG: sco:SCO7688 hypothetical protein YP_004118659.1 PFAM: Thioesterase; KEGG: saq:Sare_1269 oleoyl-(acyl-carrier-protein) hydrolase YP_004118660.1 KEGG: sco:SCO7685 hypothetical protein; TIGRFAM: thiazolinyl imide reductase; PFAM: oxidoreductase domain protein YP_004118661.1 PFAM: Saccharopine dehydrogenase; KEGG: sco:SCO7684 hypothetical protein YP_004118662.1 KEGG: pfl:PFL_3492 pyochelin synthetase F; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; Non-ribosomal peptide synthetase; Methyltransferase type 12; phosphopantetheine-binding; Thioesterase YP_004118663.1 KEGG: sro:Sros_3766 amino acid adenylation; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Non-ribosomal peptide synthetase YP_004118664.1 KEGG: bpt:Bpet4211 AraC family transcriptional regulator YP_004118665.1 KEGG: esa:ESA_02327 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_004118666.1 KEGG: pfo:Pfl01_2471 cytochrome c, class I YP_004118667.1 KEGG: ypy:YPK_4171 hypothetical protein YP_004118668.1 KEGG: asu:Asuc_1228 hypothetical protein YP_004118670.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gdj:Gdia_2710 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004118671.1 PFAM: transposase IS3/IS911 family protein; KEGG: eoj:ECO26_5475 hypothetical protein YP_004118672.1 PFAM: IS66 Orf2 family protein; KEGG: eoj:ECO26_5474 hypothetical protein YP_004118673.1 KEGG: ctu:Ctu_33000 hypothetical protein YP_004118674.1 KEGG: hypothetical protein YP_004118675.1 KEGG: noc:Noc_0779 Na+/solute symporter YP_004118676.1 KEGG: eta:ETA_19180 conserved hypothetical protein YcgZ YP_004118677.1 KEGG: eta:ETA_19190 hypothetical protein YP_004118678.1 KEGG: ent:Ent638_1754 hypothetical protein YP_004118679.1 KEGG: hypothetical protein YP_004118680.1 KEGG: eta:ETA_19190 hypothetical protein YP_004118681.1 KEGG: hch:HCH_06431 N-methylhydantoinase A/acetone carboxylase, beta subunit YP_004118682.1 KEGG: esa:ESA_pESA3p05443 hypothetical protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004118683.1 KEGG: esa:ESA_pESA3p05442 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004118684.1 KEGG: kpe:KPK_2665 DNA-binding response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_004118685.1 PFAM: MltA-interacting MipA family protein; KEGG: kpe:KPK_2664 MipA family protein YP_004118686.1 KEGG: spe:Spro_1219 hypothetical protein; TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein YP_004118687.1 KEGG: spe:Spro_2385 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; manually curated; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004118688.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: bac:BamMC406_6266 CopG/DNA-binding domain-containing protein YP_004118689.1 KEGG: hypothetical protein YP_004118690.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpu:KP1_2904 putative oxidoreductase YP_004118691.1 KEGG: pst:PSPTO_1363 sugar transporter family protein; TIGRFAM: sugar transporter; PFAM: General substrate transporter YP_004118692.1 KEGG: psb:Psyr_0008 helix-turn-helix, AraC type; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004118693.1 KEGG: pst:PSPTO_0189 nitrilase, putative; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004118694.1 KEGG: psb:Psyr_0005 hypothetical protein YP_004118695.1 PFAM: CsbD family protein; KEGG: cko:CKO_03869 putative stress-response protein YP_004118696.1 KEGG: hypothetical protein YP_004118697.1 KEGG: eta:ETA_19180 conserved hypothetical protein YcgZ YP_004118698.1 KEGG: eta:ETA_19190 hypothetical protein YP_004118699.1 KEGG: ctu:Ctu_1p00260 regulatory protein AriR YP_004118701.1 KEGG: eta:ETA_19190 hypothetical protein YP_004118702.1 KEGG: esa:ESA_pESA3p05511 hypothetical protein YP_004118703.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_00100 HTH-type transcriptional regulator BudR (Bud operon transcriptional regulator) YP_004118704.1 TIGRFAM: alpha-acetolactate decarboxylase; KEGG: eta:ETA_00110 acetolactate decarboxylase; PFAM: alpha-acetolactate decarboxylase YP_004118705.1 KEGG: eta:ETA_00120 acetolactate synthase; TIGRFAM: acetolactate synthase, catabolic; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding YP_004118706.1 KEGG: efe:pEFER_0055 conserved hypothetical protein, putative helix-turn-helix, fis-type YP_004118707.1 KEGG: efe:pEFER_0056 hypothetical protein, putative membrane transporter YP_004118708.1 KEGG: dda:Dd703_1296 iron-containing alcohol dehydrogenase YP_004118709.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1524 ABC transporter permease protein YP_004118710.1 KEGG: pct:PC1_1398 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118711.1 KEGG: pct:PC1_1399 ABC transporter periplasmic binding protein YP_004118712.1 manually curated; KEGG: cko:CKO_02077 D-cysteine desulfhydrase YP_004118713.1 KEGG: ent:Ent638_2498 cold-shock DNA-binding protein family protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004118714.1 KEGG: similar to phytanoyl-CoA 2-hydroxylase YP_004118715.1 KEGG: sgl:SGP2_0007 hypothetical protein YP_004118716.1 PFAM: heat shock protein Hsp20; KEGG: kpu:KP1_0633 putative heat shock protein YP_004118717.1 PFAM: plasmid stabilization system; KEGG: pmr:PMI0551 hypothetical protein YP_004118718.1 KEGG: ote:Oter_1334 hypothetical protein YP_004118719.1 KEGG: SKP2; S-phase kinase-associated protein 2 (p45); K03875 F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2) YP_004118720.1 KEGG: pyridine nucleotide-disulphide oxidoreductase domain containing protein YP_004118721.1 KEGG: ctu:Ctu_33000 hypothetical protein YP_004118722.1 KEGG: kpn:KPN_pKPN5p08238 hypothetical protein YP_004118723.1 TIGRFAM: enolase; KEGG: cko:CKO_01535 hypothetical protein; PFAM: Enolase-like YP_004118724.1 KEGG: kpn:KPN_02552 universal stress protein A YP_004118725.1 PFAM: DHHA2 domain protein; phosphoesterase RecJ domain protein; KEGG: cko:CKO_01458 hypothetical protein YP_004118726.1 KEGG: bpy:Bphyt_0285 ChrB domain protein YP_004118727.1 KEGG: mlo:mlr2295 transporter YP_004118728.1 KEGG: dia:Dtpsy_3538 DNA repair protein RadC; manually curated; PFAM: DNA repair protein RadC YP_004118729.1 KEGG: hypothetical protein YP_004118731.1 KEGG: Probable Hsp40p co-chaperone, has a DnaJ-like domain YP_004118732.1 KEGG: cro:ROD_15401 hypothetical protein YP_004118733.1 KEGG: ctu:Ctu_1p00270 hypothetical protein YP_004118734.1 KEGG: Os03g0788400; hypothetical protein YP_004118735.1 KEGG: conserved hypothetical protein YP_004118736.1 KEGG: hypothetical protein YP_004118737.1 KEGG: cno:NT01CX_1879 flagellar cap protein FliD YP_004118738.1 KEGG: esa:ESA_pESA3p05462 hypothetical protein; PFAM: BLUF domain protein; EAL domain protein; SMART: EAL domain protein YP_004118739.1 KEGG: eta:ETA_19190 hypothetical protein YP_004118741.1 KEGG: ent:Ent638_1754 hypothetical protein YP_004118742.1 KEGG: ent:Ent638_1755 hypothetical protein YP_004118743.1 KEGG: ctu:Ctu_1p00280 uncharacterized protein YcgZ YP_004118746.1 KEGG: eta:ETA_19180 conserved hypothetical protein YcgZ YP_004118747.1 KEGG: hypothetical protein YP_004118748.1 KEGG: cyc:PCC7424_4442 multi-sensor signal transduction histidine kinase YP_004118749.1 PFAM: Protein of unknown function DUF2171; KEGG: aci:ACIAD0005 hypothetical protein YP_004118750.1 KEGG: ctu:Ctu_1p00280 uncharacterized protein YcgZ YP_004118751.1 KEGG: kpu:KP1_1727 hypothetical protein YP_004118752.1 KEGG: apv:Apar_0730 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) YP_004118754.1 PFAM: alpha amylase catalytic region; KEGG: efe:EFER_1166 cytoplasmic alpha-amylase; SMART: alpha amylase catalytic sub domain YP_004118757.1 KEGG: mms:mma_1649 hypothetical protein YP_004118758.1 KEGG: pde:Pden_3332 XRE family plasmid maintenance system antidote protein YP_004118760.1 KEGG: Neu4; sialidase 4; K12357 sialidase-2/3/4 YP_004118762.1 KEGG: ctu:Ctu_19030 glycogen synthesis protein GlgS YP_004118763.1 KEGG: aoe:Clos_0595 integrase catalytic region YP_004118764.1 KEGG: ctu:Ctu_29840 aquaporin Z; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein YP_004118765.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: spe:Spro_2752 protein of unknown function DUF883, ElaB YP_004118766.1 KEGG: kpu:KP1_4826 hypothetical protein YP_004118767.1 PFAM: Protein of unknown function DUF2311, membrane; KEGG: spe:Spro_4329 hypothetical protein YP_004118768.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: abb:ABBFA_001500 diguanylate cyclase (GGDEF) domain protein; SMART: GGDEF domain containing protein YP_004118769.1 PFAM: protein of unknown function DUF1493; KEGG: ctu:Ctu_14500 hypothetical protein YP_004118771.1 KEGG: smt:Smal_2429 NAD(P)H dehydrogenase (quinone) YP_004118772.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: smt:Smal_2429 NAD(P)H dehydrogenase (quinone) YP_004118773.1 PFAM: helix-turn-helix HxlR type; KEGG: sml:Smlt2983 hypothetical protein YP_004118774.1 KEGG: rfe:RF_0786 DNA primase YP_004118775.1 KEGG: mdi:METDI1226 putative plasmid maintenance system antidote protein, HTH DNA-binding domain YP_004118776.1 KEGG: bpt:Bpet3484 hypothetical protein YP_004118777.1 KEGG: kpe:KPK_3392 cyclic diguanylate phosphodiesterase (EAL) domain protein; PFAM: EAL domain protein; GAF domain protein; SMART: EAL domain protein; GAF domain protein; GGDEF domain containing protein YP_004118778.1 KEGG: spe:Spro_2143 hypothetical protein YP_004118779.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsk:RSKD131_0472 short-chain dehydrogenase/reductase SDR YP_004118780.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: oan:Oant_3582 alcohol dehydrogenase YP_004118781.1 KEGG: smd:Smed_6307 hypothetical protein YP_004118782.1 TIGRFAM: histidinol dehydrogenase; KEGG: mlo:mlr7107 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_004118783.1 KEGG: mlo:mlr7115 ABC-transport protein, ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118784.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7114 ABC transporter, permease protein YP_004118785.1 PFAM: NMT1/THI5 like domain protein; KEGG: mlo:mlr7112 hypothetical protein YP_004118786.1 KEGG: bch:Bcen2424_6600 GntR domain-containing protein; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH YP_004118787.1 PFAM: Endoribonuclease L-PSP; KEGG: ara:Arad_7943 translation initiation inhibitor protein YP_004118788.1 KEGG: atc:AGR_pAT_329 amino acid ABC transporter, permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004118789.1 KEGG: bja:bll3979 ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004118790.1 KEGG: bja:bll3978 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118791.1 KEGG: bja:bll3977 ABC transporter substrate-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004118792.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bbt:BBta_7662 putative succinylglutamate desuccinylase/aspartoacylase YP_004118793.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_1970 pyridoxal-5'-phosphate-dependent enzyme, beta subunit YP_004118794.1 KEGG: pay:PAU_02087 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004118795.1 PFAM: HipA domain protein; KEGG: pay:PAU_02086 hypothetical protein YP_004118796.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ent:Ent638_3916 GCN5-related N-acetyltransferase YP_004118797.1 manually curated; KEGG: bid:Bind_1825 short chain dehydrogenase YP_004118798.1 PFAM: protein of unknown function DUF1471; KEGG: eta:ETA_33730 hypothetical protein YP_004118799.1 KEGG: cko:CKO_03838 iron-dicitrate transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118800.1 PFAM: transport system permease protein; KEGG: pay:PAU_03944 iron(III) dicitrate transport system permease protein FecD YP_004118801.1 PFAM: transport system permease protein; KEGG: cko:CKO_03836 iron-dicitrate transporter permease subunit YP_004118802.1 PFAM: periplasmic binding protein; KEGG: cko:CKO_03834 iron-dicitrate transporter substrate-binding subunit YP_004118803.1 KEGG: cko:CKO_03833 hypothetical protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain YP_004118804.1 PFAM: FecR protein; KEGG: eoj:ECO26_5460 putative transmembrane signal transducer YP_004118805.1 KEGG: eca:ECA1079 RNA polymerase sigma factor FecI; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004118806.1 KEGG: art:Arth_1984 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004118807.1 KEGG: aau:AAur_0593 amino acid ABC transporter; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004118808.1 KEGG: aau:AAur_0594 amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004118809.1 KEGG: aau:AAur_0595 putative glutamine ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118810.1 PFAM: FAD dependent oxidoreductase; KEGG: aau:AAur_0597 fructosyl-amino acid oxidase YP_004118811.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: avn:Avin_33880 twin-arginine translocation pathway signal and cupin region containing protein YP_004118812.1 KEGG: eta:ETA_07650 DNA-binding protein H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_004118813.1 PFAM: TraX family protein; KEGG: ent:Ent638_4312 TraX family protein YP_004118814.1 PFAM: metallophosphoesterase; KEGG: etr:ETAE_0903 hypothetical protein YP_004118815.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: etr:ETAE_0904 putative inner membrane component of binding-protein-dependent transport system YP_004118816.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: etr:ETAE_0905 binding-protein-dependent transport system inner membrane component YP_004118817.1 PFAM: extracellular solute-binding protein family 1; KEGG: etr:ETAE_0906 putative extracellular solute-binding protein YP_004118818.1 KEGG: etr:ETAE_0907 putative ABC-type sugar transport system; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_004118819.1 KEGG: hypothetical protein YP_004118820.1 KEGG: etr:ETAE_3284 ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein YP_004118821.1 KEGG: spe:Spro_4628 ferrous iron transport protein A; manually curated; PFAM: FeoA family protein YP_004118822.1 PFAM: initiator RepB protein; KEGG: sec:SCV20 RepFIB replication protein A YP_004118823.1 KEGG: spe:Spro_1376 hypothetical protein YP_004118824.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ent:Ent638_4322 cobyrinic acid a,c-diamide synthase YP_004118825.1 KEGG: kpu:KP1_1593 biotin sulfoxide reductase; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase YP_004118826.1 PFAM: putative esterase; KEGG: set:SEN2622 hypothetical protein YP_004118827.1 PFAM: peptidase M28; KEGG: sti:Sthe_2347 peptidase M28 YP_004118828.1 KEGG: ddc:Dd586_0718 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004118829.1 KEGG: pjd:Pjdr2_2990 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_004118830.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcl:ABC3662 LysR family transcriptional regulator YP_004118831.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ypp:YPDSF_4140 partitioning protein A YP_004118832.1 TIGRFAM: parB-like partition protein; PFAM: ParB family protein; ParB domain protein nuclease; KEGG: kpn:KPN_pKPN4p07090 DNA-binding protein ParB; SMART: ParB domain protein nuclease YP_004118833.1 PFAM: NLPA lipoprotein; KEGG: mlo:mll4794 outer membrane lipoprotein YP_004118836.1 KEGG: yen:YE1324 hypothetical protein; manually curated; PFAM: EAL domain protein YP_004118837.1 KEGG: ctu:Ctu_37870 hypothetical protein YP_004118838.1 KEGG: spe:Spro_1517 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_004118839.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: kpn:KPN_02512 CPS export - outer membrane protein YP_004118840.1 KEGG: spe:Spro_1584 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004118841.1 TIGRFAM: capsular exopolysaccharide family; KEGG: spe:Spro_1585 non-specific protein-tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein YP_004118842.1 KEGG: cms:CMS_1585 putative polysaccharide polymerase YP_004118843.1 PFAM: glycosyl transferase group 1; KEGG: tex:Teth514_2282 glycosyl transferase, group 1 YP_004118844.1 KEGG: kra:Krad_0015 virulence factor MviN family protein; manually curated; PFAM: virulence factor MVIN family protein YP_004118845.1 manually curated; KEGG: cbe:Cbei_4734 galactoside O-acetyltransferase YP_004118846.1 PFAM: glycosyl transferase group 1; KEGG: tex:Teth514_2281 glycosyl transferase, group 1 YP_004118847.1 KEGG: bcj:BCAM1327 hypothetical protein YP_004118848.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: sgl:SG1114 mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II YP_004118849.1 KEGG: tau:Tola_2049 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_004118850.1 PFAM: glycosyl transferase group 1; KEGG: see:SNSL254_A2264 glycosyl transferase, group 1 YP_004118851.1 KEGG: ecx:EcHS_A2185 hypothetical protein YP_004118852.1 TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: eta:ETA_13210 UDP-galactose-lipid carrier transferase; PFAM: sugar transferase YP_004118853.1 KEGG: similar to kelch repeat and BTB (POZ) domain containing 10 YP_004118854.1 PFAM: acyltransferase 3; KEGG: cyn:Cyan7425_2178 acyltransferase domain, membrane protein YP_004118855.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: eca:ECA1953 putative xylose isomerase YP_004118856.1 TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); KEGG: kpu:KP1_3400 phosphoenolpyruvate carboxykinase; PFAM: phosphoenolpyruvate carboxykinase (ATP) YP_004118857.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: kpn:KPN_02286 LysR family transcriptional regulator YP_004118859.1 KEGG: esa:ESA_00606 hypothetical protein YP_004118861.1 PFAM: protein of unknown function UPF0057; KEGG: ent:Ent638_3147 hypothetical protein YP_004118862.1 PFAM: formate/nitrite transporter; KEGG: kpe:KPK_1411 hypothetical protein YP_004118863.1 KEGG: pct:PC1_3039 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004118864.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ssp:SSP2315 hypothetical protein YP_004118865.1 PFAM: protein of unknown function DUF903; KEGG: cko:CKO_03336 hypothetical protein YP_004118866.1 PFAM: protein of unknown function DUF903; KEGG: eta:ETA_19220 putative lipoprotein YgdI YP_004118867.1 KEGG: ent:Ent638_2743 hypothetical protein YP_004118869.1 KEGG: abc:ACICU_01005 hypothetical protein YP_004118870.1 KEGG: yen:YE2347 phage-like protein YP_004118871.1 KEGG: abu:Abu_1885 50S ribosomal protein L7/L12 YP_004118872.1 KEGG: similar to protein kinase YP_004118873.1 KEGG: esa:ESA_02146 hydroperoxidase II; PFAM: Catalase related subgroup; Catalase domain protein YP_004118874.1 PFAM: Sigma-S stabilisation anti-adaptor protein; KEGG: ent:Ent638_2243 hypothetical protein YP_004118875.1 KEGG: eta:ETA_30010 hypothetical protein YP_004118876.1 PFAM: regulatory protein TetR; KEGG: ent:Ent638_3520 TetR family transcriptional regulator YP_004118877.1 PFAM: Endoribonuclease L-PSP; KEGG: ent:Ent638_3519 endoribonuclease L-PSP YP_004118878.1 PFAM: glycosyl transferase group 1; KEGG: acb:A1S_0058 glycosyltransferase YP_004118879.1 KEGG: kpu:KP1_2190 hypothetical protein YP_004118880.1 KEGG: ses:SARI_02671 hypothetical protein YP_004118882.1 KEGG: ctu:Ctu_20890 glutathione import ATP-binding protein GsiA; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004118883.1 KEGG: dda:Dd703_1183 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004118884.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: dda:Dd703_1184 ornithine cyclodeaminase/mu-crystallin YP_004118885.1 TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; KEGG: dda:Dd703_1185 pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004118886.1 PFAM: peptidase M20; KEGG: dda:Dd703_1186 peptidase M20 YP_004118887.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_1187 binding-protein-dependent transport systems inner membrane component YP_004118888.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_1188 binding-protein-dependent transport systems inner membrane component YP_004118889.1 PFAM: extracellular solute-binding protein family 5; KEGG: esa:ESA_01893 hypothetical protein YP_004118890.1 KEGG: ctu:Ctu_20950 HTH-type transcriptional regulator McbR; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004118891.1 manually curated; TIGRFAM: addiction module toxin, Txe/YoeB family; KEGG: nam:NAMH_0525 addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB YP_004118892.1 KEGG: etr:ETAE_1621 prevent-host-death protein; TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172 YP_004118893.1 PFAM: protein of unknown function DUF187; KEGG: pct:PC1_2061 hypothetical protein YP_004118894.1 PFAM: N-acetyltransferase; KEGG: mlo:mlr4870 arylamine N-acetyltransferase YP_004118895.1 KEGG: eta:ETA_15100 hypothetical protein YP_004118896.1 PFAM: protein of unknown function DUF1345; KEGG: yen:YE0004 hypothetical protein YP_004118897.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: eoj:ECO26_2889 putative transposase YP_004118898.1 KEGG: GI10838 gene product from transcript GI10838-RA YP_004118899.1 KEGG: hypothetical protein YP_004118900.1 KEGG: ent:Ent638_4218 hypothetical protein YP_004118901.1 KEGG: kappa opioid receptor-like YP_004118902.1 PFAM: protein of unknown function DUF481; KEGG: sgl:SG0785 hypothetical protein YP_004118903.1 PFAM: transposase IS3/IS911 family protein; KEGG: spe:Spro_0375 transposase IS3/IS911 family protein YP_004118904.1 KEGG: eoi:ECO111_2914 hypothetical protein YP_004118905.1 KEGG: pct:PC1_1414 hypothetical protein YP_004118906.1 KEGG: methionine aminopeptidase; K01265 methionyl aminopeptidase YP_004118907.1 KEGG: ypi:YpsIP31758_4012 hypothetical protein YP_004118910.1 KEGG: ppd:Ppro_3596 isoleucyl-tRNA synthetase YP_004118911.1 KEGG: mtp:Mthe_0379 ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_004118912.1 KEGG: hypothetical protein YP_004118913.1 KEGG: eoj:ECO26_1300 hypothetical protein YP_004118914.1 PFAM: IS66 Orf2 family protein; KEGG: ecc:c3657 hypothetical protein YP_004118915.1 PFAM: transposase IS66; KEGG: eoh:ECO103_3783 hypothetical protein YP_004118917.1 KEGG: rha:RHA1_ro00520 3-(2-hydroxyphenyl) propionic acid monooxygenase YP_004118918.1 PFAM: protein of unknown function DUF932; KEGG: ent:Ent638_4279 hypothetical protein YP_004118919.1 PFAM: Lytic transglycosylase catalytic; KEGG: ent:Ent638_4280 lytic transglycosylase, catalytic YP_004118920.1 KEGG: ent:Ent638_4281 hypothetical protein YP_004118921.1 KEGG: ent:Ent638_4282 hypothetical protein YP_004118922.1 PFAM: TraA family protein; KEGG: eta:ETA_pET450090 TraA protein YP_004118923.1 KEGG: ent:Ent638_4284 conjugal transfer pilus assembly protein TraL; TIGRFAM: type IV conjugative transfer system protein TraL; PFAM: TraL family protein YP_004118924.1 KEGG: ent:Ent638_4285 TraE family protein; TIGRFAM: type IV conjugative transfer system protein TraE; PFAM: TraE family protein YP_004118925.1 KEGG: ent:Ent638_4286 conjugal transfer protein TraK; TIGRFAM: type-F conjugative transfer system secretin TraK; PFAM: TraK family protein YP_004118926.1 PFAM: TraB pilus assembly family protein; KEGG: ent:Ent638_4287 conjugal transfer pilus assembly protein TraB YP_004118927.1 TIGRFAM: transcriptional activator RfaH; PFAM: NGN domain protein; KEGG: stt:t3320 transcriptional activator RfaH; SMART: NGN domain protein YP_004118928.1 KEGG: rha:RHA1_ro03539 copper-exporting ATPase YP_004118929.1 KEGG: kra:Krad_1453 protein of unknown function DUF477 YP_004118930.1 KEGG: hypothetical protein LOC100265998 YP_004118932.1 KEGG: ent:Ent638_4289 conjugal transfer protein TraV; TIGRFAM: type IV conjugative transfer system protein TraV; PFAM: Type IV conjugative transfer system protein TraV YP_004118933.1 KEGG: bac:BamMC406_4874 integral membrane sensor signal transduction histidine kinase YP_004118934.1 TIGRFAM: type-IV secretion system protein TraC; KEGG: ent:Ent638_4290 conjugal transfer ATP-binding protein TraC YP_004118935.1 KEGG: ent:Ent638_4291 hypothetical protein; TIGRFAM: type-F conjugative transfer system protein TrbI; PFAM: Type-F conjugative transfer system protein TrbI YP_004118936.1 TIGRFAM: type-F conjugative transfer system protein TraW; KEGG: ent:Ent638_4292 conjugal transfer pilus assembly protein TraW YP_004118937.1 KEGG: ppe:PEPE_0645 leucyl-tRNA synthetase YP_004118938.1 KEGG: ent:Ent638_4295 hypothetical protein YP_004118939.1 PFAM: TraU family protein; KEGG: ent:Ent638_4296 conjugal transfer pilus assembly protein TraU YP_004118940.1 KEGG: ent:Ent638_4297 hypothetical protein; TIGRFAM: type-F conjugative transfer system pilin assembly protein TrbC; PFAM: Type-F conjugative transfer system pilin assembly protein TrbC YP_004118941.1 KEGG: ent:Ent638_4298 conjugal transfer mating pair stabilization protein TraN YP_004118942.1 TIGRFAM: type-F conjugative transfer system pilin assembly protein TraF; KEGG: ent:Ent638_4299 conjugal pilus assembly protein TraF YP_004118943.1 KEGG: gvi:gll1276 hypothetical protein YP_004118944.1 KEGG: similar to TAR RNA loop binding protein YP_004118945.1 KEGG: ent:Ent638_4301 conjugal transfer protein TrbB YP_004118946.1 KEGG: pvi:Cvib_0163 ammonium transporter YP_004118947.1 SMART: AAA ATPase; KEGG: bph:Bphy_4982 hypothetical protein YP_004118948.1 PFAM: TraH family protein; KEGG: ent:Ent638_4303 conjugal transfer pilus assembly protein TraH YP_004118949.1 PFAM: TraG domain protein; KEGG: ent:Ent638_4304 conjugal transfer mating pair stabilization protein TraG YP_004118950.1 KEGG: eat:EAT1b_0806 major facilitator superfamily MFS_1 YP_004118951.1 PFAM: TraT complement resistance family protein; KEGG: esa:ESA_03219 hypothetical protein YP_004118952.1 KEGG: hypothetical protein YP_004118953.1 KEGG: nfa:nfa19350 putative transporter YP_004118954.1 KEGG: kpe:KPK_1715 pyruvate-flavodoxin oxidoreductase; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004118956.1 KEGG: yen:YE2520 flagellin lysine-N-methylase YP_004118957.1 KEGG: smd:Smed_2458 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004118958.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: scl:sce1526 putative D-isomer specific 2-hydroxyacid dehydrogenase family protein YP_004118959.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: rpf:Rpic12D_4096 dimethylmenaquinone methyltransferase YP_004118960.1 KEGG: atc:AGR_C_1271 2-dehydro-3-deoxygalactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase YP_004118961.1 PFAM: KDPG and KHG aldolase; KEGG: ara:Arad_1102 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase protein YP_004118962.1 PFAM: major facilitator superfamily MFS_1; KEGG: msm:MSMEG_2549 major facilitator superfamily protein YP_004118963.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: xau:Xaut_3370 mandelate racemase/muconate lactonizing protein YP_004118964.1 KEGG: cro:ROD_20931 shikimate transporter; TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1 YP_004118965.1 KEGG: har:HEAR2556 hypothetical protein YP_004118966.1 PFAM: FAD dependent oxidoreductase; glucose-methanol-choline oxidoreductase; KEGG: har:HEAR2557 glucose dehydrogenase YP_004118967.1 KEGG: har:HEAR2558 putative alcohol dehydrogenase cytochrome c subunit precursor; PFAM: cytochrome c class I YP_004118968.1 PFAM: periplasmic binding protein; KEGG: cko:CKO_02384 hypothetical protein YP_004118969.1 KEGG: cko:CKO_02385 hypothetical protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004118970.1 KEGG: plu:plu0949 hypothetical protein; manually curated; PFAM: regulatory protein TetR YP_004118971.1 PFAM: protein of unknown function DUF1486; KEGG: bur:Bcep18194_A4942 hypothetical protein YP_004118972.1 PFAM: Transcriptional regulator TetR ; regulatory protein TetR; KEGG: abc:ACICU_01698 TetR family transcriptional regulator YP_004118973.1 PFAM: secretion protein HlyD family protein; KEGG: abc:ACICU_01699 membrane-fusion protein YP_004118974.1 KEGG: abc:ACICU_01700 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase YP_004118975.1 PFAM: ABC-2 type transporter; KEGG: abm:ABSDF1895 ABC transporter membrane protein YP_004118976.1 PFAM: ABC-2 type transporter; KEGG: abc:ACICU_01702 ABC-type multidrug transport system, permease component YP_004118977.1 KEGG: bbr:BB2379 outer membrane efflux protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004118978.1 PFAM: carbonic anhydrase; KEGG: stm:PSLT046 putative carbonic anhydrase YP_004118979.1 KEGG: yen:YE1086 putative cytochrome c; PFAM: cytochrome c class I YP_004118980.1 PFAM: FAD dependent oxidoreductase; glucose-methanol-choline oxidoreductase; KEGG: bpy:Bphyt_6818 glucose-methanol-choline oxidoreductase YP_004118981.1 KEGG: spe:Spro_1809 putative dehydrogenase subunit YP_004118982.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_3324 transcriptional regulator, LysR family YP_004118983.1 KEGG: bch:Bcen2424_3220 hypothetical protein YP_004118984.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: acr:Acry_0674 antibiotic biosynthesis monooxygenase YP_004118985.1 PFAM: Methionine synthase vitamin-B12 independent; KEGG: cms:CMS_1179 hypothetical protein YP_004118986.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: ppg:PputGB1_2155 flavin reductase domain-containing protein YP_004118988.1 KEGG: eta:ETA_00560 hypothetical protein YP_004118989.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ctu:Ctu_35480 hypothetical protein YP_004118990.1 PFAM: YCII-related; KEGG: sha:SH0448 hypothetical protein YP_004118991.1 KEGG: aca:ACP_1781 hypothetical protein; manually curated; SMART: AAA ATPase YP_004118992.1 KEGG: esa:ESA_pESA3p05470 hypothetical protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004118993.1 KEGG: kpe:KPK_3349 ACT domain protein YP_004118994.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: kpn:KPN_01147 hypothetical protein YP_004118995.1 SMART: Pyrrolo-quinoline quinone beta-propeller repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; KEGG: gox:GOX1857 PQQ-containing dehydrogenase 1; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone YP_004118996.1 KEGG: psa:PST_3455 ATPase of the AAA+ class; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_004118997.1 KEGG: ajs:Ajs_0810 hypothetical protein YP_004118998.1 KEGG: dac:Daci_2950 LysR family transcriptional regulator YP_004118999.1 KEGG: las:CLIBASIA_02695 fructose-bisphosphate aldolase YP_004119000.1 KEGG: zmn:Za10_1378 helicase domain protein; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004119001.1 KEGG: shl:Shal_1756 hypothetical protein YP_004119002.1 PFAM: extracellular solute-binding protein family 5; KEGG: ddc:Dd586_0446 extracellular solute-binding protein family 5 YP_004119003.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddc:Dd586_0447 binding-protein-dependent transport systems inner membrane component YP_004119004.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_3505 binding-protein-dependent transport systems inner membrane component YP_004119005.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: dze:Dd1591_3627 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004119006.1 KEGG: dda:Dd703_3503 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004119007.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ddc:Dd586_0451 peptidase M20 YP_004119008.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dda:Dd703_3501 transcriptional regulator, LysR family YP_004119009.1 TIGRFAM: 1-aminocyclopropane-1-carboxylate deaminase; KEGG: dze:Dd1591_3623 1-aminocyclopropane-1-carboxylate deaminase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004119010.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcj:BCAS0701 hypothetical protein YP_004119011.1 KEGG: ddc:Dd586_0456 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type YP_004119012.1 KEGG: shn:Shewana3_0319 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004119013.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bvi:Bcep1808_6276 6-phosphogluconate dehydrogenase, NAD-binding YP_004119014.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: bvi:Bcep1808_6279 ethyl tert-butyl ether degradation EthD YP_004119015.1 PFAM: major facilitator superfamily MFS_1; KEGG: psp:PSPPH_2306 major facilitator family transporter YP_004119016.1 PFAM: regulatory protein TetR; KEGG: pfs:PFLU4288 TetR-family regulatory protein YP_004119017.1 KEGG: tel:tlr1369 DNA gyrase subunit A YP_004119018.1 PFAM: isochorismatase hydrolase; KEGG: kpe:KPK_3346 isochorismatase hydrolase family protein YP_004119019.1 KEGG: pfl:PFL_4124 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain YP_004119020.1 KEGG: pfl:PFL_4125 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004119021.1 PFAM: secretion protein HlyD family protein; KEGG: pfl:PFL_4126 HlyD family secretion protein YP_004119022.1 KEGG: pfl:PFL_4127 outer membrane efflux protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004119023.1 KEGG: etw:ECSP_0829 hypothetical protein YP_004119024.1 KEGG: kpu:KP1_2654 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004119025.1 KEGG: eci:UTI89_C0291 hypothetical protein YP_004119027.1 KEGG: seh:SeHA_C4905 putative inner membrane protein YP_004119028.1 PFAM: integrase family protein; KEGG: eoi:ECO111_p2-003 cyclization recombinase YP_004119029.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: eck:EC55989_4912 putative filamentation induced by cAMP protein Fic YP_004119030.1 KEGG: eta:ETA_23980 putative drug resistance transporter Bcr/CflA subfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004119031.1 PFAM: peptidase S15; KEGG: yen:YE3023 hypothetical protein YP_004119032.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: yen:YE3024 transcriptional activator; SMART: response regulator receiver YP_004119033.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: yen:YE3025 putative two-component system sensor protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004119034.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: elf:LF82_p250 hypothetical protein YP_004119035.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: yen:YE3027 exported protein YP_004119036.1 KEGG: elf:LF82_p248 hypothetical protein YP_004119037.1 PFAM: aldo/keto reductase; KEGG: efe:EFER_2672 putative aldo-keto reductase YP_004119038.1 PFAM: aldo/keto reductase; KEGG: ypb:YPTS_1100 aldo/keto reductase YP_004119039.1 KEGG: pwa:Pecwa_2142 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004119040.1 PFAM: PEBP family protein; KEGG: dac:Daci_5958 PEBP family protein YP_004119041.1 PFAM: Domain of unknown function DUF1814; KEGG: ilo:IL0577 hypothetical protein YP_004119042.1 KEGG: ilo:IL0576 hypothetical protein YP_004119043.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: avn:Avin_35890 regulatory protein, LysR family YP_004119044.1 PFAM: beta-lactamase; KEGG: avn:Avin_35880 beta-lactamase-like protein YP_004119045.1 TIGRFAM: zinc-binding alcohol dehydrogenase family protein; KEGG: ddc:Dd586_0996 zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_004119046.1 PFAM: major facilitator superfamily MFS_1; KEGG: avn:Avin_35870 major facilitator family transporter YP_004119047.1 KEGG: sec:SCV43 hypothetical protein YP_004119048.1 KEGG: eta:ETA_07650 DNA-binding protein H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_004119049.1 PFAM: aminotransferase class-III; KEGG: mva:Mvan_2918 aminotransferase class-III YP_004119050.1 PFAM: amino acid permease-associated region; KEGG: mkm:Mkms_0242 amino acid permease-associated region YP_004119051.1 PFAM: glutamine synthetase catalytic region; KEGG: mbt:JTY_1899 putative glutamine synthetase YP_004119052.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: sro:Sros_7853 putative transcriptional regulator, RpiR family YP_004119053.1 PFAM: N-formylglutamate amidohydrolase; KEGG: spe:Spro_2568 N-formylglutamate amidohydrolase YP_004119054.1 PFAM: isochorismatase hydrolase; KEGG: rde:RD1_1500 hypothetical protein YP_004119055.1 PFAM: MltA-interacting MipA family protein; KEGG: pna:Pnap_2966 MltA-interacting MipA family protein YP_004119056.1 KEGG: mms:mma_3229 two component sensor histidine kinase protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_004119057.1 KEGG: ajs:Ajs_0194 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_004119058.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: sme:SMc02318 hypothetical protein YP_004119059.1 KEGG: bcg:BCG9842_B1979 N-acetylmuramoyl-L-alanine amidase YP_004119060.1 PFAM: regulatory protein LysR; KEGG: avn:Avin_46370 transcriptional regulator, LysR-family YP_004119061.1 SMART: low-density lipoprotein receptor YWTD repeat; KEGG: ara:Arad_4078 hypothetical protein YP_004119062.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: avn:Avin_26210 phytanoyl-CoA dioxygenase protein YP_004119063.1 KEGG: avn:Avin_26190 bacterial regulatory protein, LacI family YP_004119064.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bid:Bind_2828 inositol 2-dehydrogenase YP_004119065.1 KEGG: xca:xccb100_3522 hypothetical protein YP_004119066.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bid:Bind_2825 oxidoreductase domain-containing protein YP_004119067.1 PFAM: Xylose isomerase domain protein TIM barrel; AP endonuclease 2 domain protein; KEGG: bid:Bind_2826 xylose isomerase domain-containing protein YP_004119068.1 KEGG: avn:Avin_26220 periplasmic binding protein/LacI transcriptional regulator protein YP_004119069.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bid:Bind_2827 oxidoreductase domain-containing protein YP_004119070.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: acr:Acry_2328 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_004119071.1 KEGG: bid:Bind_2830 HpcH/HpaI aldolase; PFAM: HpcH/HpaI aldolase YP_004119072.1 PFAM: Aldehyde Dehydrogenase; KEGG: bid:Bind_2831 aldehyde dehydrogenase YP_004119073.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: bid:Bind_2833 RpiR family transcriptional regulator YP_004119074.1 PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bid:Bind_2834 thiamine pyrophosphate protein central region YP_004119075.1 KEGG: bid:Bind_2835 xylose isomerase domain-containing protein; PFAM: Xylose isomerase domain protein TIM barrel; AP endonuclease 2 domain protein YP_004119076.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_2836 short chain dehydrogenase YP_004119077.1 KEGG: rbo:A1I_00730 NACHT family NTPase YP_004119078.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpu:KP1_1151 glutamate/aspartate transport system permease component YP_004119079.1 KEGG: cko:CKO_01692 hypothetical protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004119080.1 KEGG: kpe:KPK_4392 putative amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004119081.1 KEGG: kpu:KP1_1154 cysteine transport system periplasmic binding component; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004119082.1 KEGG: avi:Avi_7155 nitrilotriacetate monooxygenase YP_004119083.1 KEGG: msm:MSMEG_4388 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004119084.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xac:XAC0858 ABC transporter permease YP_004119085.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xac:XAC0857 ABC transporter permease YP_004119086.1 PFAM: extracellular solute-binding protein family 5; KEGG: xac:XAC0856 ABC transporter oligopeptide binding protein YP_004119087.1 PFAM: extracellular solute-binding protein family 5; KEGG: kpe:KPK_2318 peptide ABC transporter, periplasmic peptide-binding protein YP_004119088.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_02020 oligopeptide ABC transporter, permease YP_004119089.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpe:KPK_2316 peptide ABC transporter, permease protein YP_004119090.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: kpe:KPK_2315 peptide ABC transporter, ATP-binding protein; SMART: AAA ATPase YP_004119091.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: kpu:KP1_3099 oligopeptide ABC transport system ATP-binding component; SMART: AAA ATPase YP_004119092.1 KEGG: ara:Arad_2917 metapyrocatechase; catechol 2,3-dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004119093.1 KEGG: msm:MSMEG_2841 putative monooxygenase YP_004119094.1 KEGG: kra:Krad_2170 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004119095.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_2532 putative ABC transporter YP_004119096.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kra:Krad_2172 binding-protein-dependent transport systems inner membrane component YP_004119097.1 PFAM: extracellular solute-binding protein family 5; KEGG: kra:Krad_2173 extracellular solute-binding protein family 5 YP_004119098.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: ara:Arad_7681 FMNH2-dependent monooxygenase protein YP_004119099.1 KEGG: ppw:PputW619_3951 hypothetical protein YP_004119100.1 PFAM: major facilitator superfamily MFS_1; KEGG: cyn:Cyan7425_0013 major facilitator superfamily MFS_1 YP_004119101.1 KEGG: pat:Patl_2326 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004119102.1 KEGG: Receptor protein kinase CLAVATA1 precursor, putative YP_004119103.1 KEGG: cro:ROD_p1111 putative adhesin glycosyltransferase YP_004119104.1 KEGG: esa:ESA_02084 hypothetical protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin YP_004119105.1 KEGG: bcm:Bcenmc03_6174 putative monooxygenase YP_004119106.1 KEGG: eca:ECA2964 putative peptidase; TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_004119107.1 KEGG: ara:Arad_7721 nitrilotriacetate monooxygenase protein component A YP_004119108.1 KEGG: avi:Avi_7201 ABC transporter nucleotide binding/ATPase protein (peptide); PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004119109.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_6563 binding-protein-dependent transport systems inner membrane component YP_004119110.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_7717 dipeptide ABC transporter YP_004119111.1 PFAM: extracellular solute-binding protein family 5; KEGG: bch:Bcen2424_6565 extracellular solute-binding protein YP_004119112.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcj:BCAS0447 putative acetyltransferase-GNAT family YP_004119113.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dol:Dole_2157 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004119114.1 KEGG: ddc:Dd586_4032 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004119115.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; KEGG: tau:Tola_0414 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region YP_004119116.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; KEGG: ddc:Dd586_4030 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region YP_004119117.1 PFAM: major facilitator superfamily MFS_1; KEGG: ddc:Dd586_4029 major facilitator superfamily MFS_1 YP_004119118.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cro:ROD_11951 LysR-family transcriptional regulator YP_004119119.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpe:KPK_3186 tartrate transporter TtuB YP_004119120.1 TIGRFAM: tartrate dehydrogenase; KEGG: cro:ROD_11931 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004119121.1 KEGG: kpu:KP1_2293 putative hydroxypyruvate reductase; PFAM: MOFRL domain protein YP_004119122.1 KEGG: bbr:BB1475 hypothetical protein YP_004119123.1 KEGG: spe:Spro_2015 gluconate 2-dehydrogenase (acceptor) YP_004119124.1 KEGG: spe:Spro_2014 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I YP_004119125.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cko:CKO_01569 3-hydroxy acid dehydrogenase YP_004119126.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: pen:PSEEN4760 4-oxalocrotonate tautomerase YP_004119127.1 PFAM: PEBP family protein; KEGG: spe:Spro_2903 PEBP family protein YP_004119128.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: eta:ETA_16570 hypothetical protein YP_004119129.1 KEGG: gdj:Gdia_0413 cupin domain protein YP_004119130.1 KEGG: sus:Acid_1736 PadR family transcriptional regulator; TIGRFAM: transcriptional regulator, PadR-family; PFAM: transcriptional regulator PadR family protein YP_004119131.1 KEGG: cai:Caci_8233 hypothetical protein YP_004119132.1 PFAM: aldo/keto reductase; KEGG: esi:Exig_2950 aldo/keto reductase YP_004119133.1 KEGG: mrd:Mrad2831_0448 hypothetical protein YP_004119134.1 KEGG: rpt:Rpal_3825 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone YP_004119135.1 KEGG: gox:GOX2211 hypothetical protein YP_004119136.1 PFAM: Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: ooe:OEOE_0293 hypothetical protein YP_004119137.1 PFAM: O-methyltransferase family 3; KEGG: msl:Msil_0886 O-methyltransferase family 3 YP_004119138.1 PFAM: regulatory protein TetR; KEGG: ret:RHE_PF00169 transcription regulator TetR YP_004119139.1 KEGG: asa:ASA_1449 glycosyltransferase WbpL YP_004119140.1 KEGG: sil:SPO0424 membrane protein YP_004119141.1 PFAM: initiator RepB protein; KEGG: ctu:Ctu_1p01130 replication protein RepA YP_004119142.1 PFAM: DNA partition complex ParG; KEGG: sed:SeD_B0124 hypothetical protein YP_004119143.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: hde:HDEF_1398 plasmid partition protein ParA-like protein YP_004119144.1 KEGG: kpe:KPK_5058 DNA-binding transcriptional regulator AraC; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004119145.1 KEGG: cbl:CLK_0637 sugar transporter family protein; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1 YP_004119146.1 KEGG: pjd:Pjdr2_0896 beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein YP_004119147.1 PFAM: initiator RepB protein; KEGG: kpe:KPK_B0094 replication protein YP_004119148.1 KEGG: eum:ECUMN_2780 putative oxidoreductase Fe-S binding subunit; TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004119150.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pct:PC1_3939 GCN5-related N-acetyltransferase YP_004119151.1 KEGG: pfs:PFLU2193 putative riboflavin biosynthesis deaminase; PFAM: CMP/dCMP deaminase zinc-binding YP_004119152.1 PFAM: AIG2 family protein; KEGG: kpe:KPK_2039 hypothetical protein YP_004119153.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bur:Bcep18194_B0248 LysR family transcriptional regulator YP_004119154.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rlg:Rleg_2347 glyoxalase/bleomycin resistance protein/dioxygenase YP_004119155.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kpe:KPK_B0054 putative acetyltransferase YP_004119156.1 PFAM: Methyltransferase type 11; KEGG: kpe:KPK_2449 thiopurine S-methyltransferase family protein YP_004119157.1 manually curated; KEGG: seh:SeHA_C4702 hypothetical protein YP_004119158.1 KEGG: ypi:YpsIP31758_B0077 hypothetical protein YP_004119159.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA3634 LysR family transcriptional regulator YP_004119160.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3635 hypothetical protein YP_004119161.1 KEGG: lsa:LSA0570 hypothetical protein YP_004119162.1 KEGG: ddc:Dd586_1826 peroxiredoxin; PFAM: glutathione peroxidase YP_004119163.1 KEGG: ade:Adeh_1035 hypothetical protein YP_004119164.1 PFAM: protein of unknown function UPF0074; KEGG: xcv:XCV0646 Rrf2 family transcriptional regulator YP_004119165.1 PFAM: protein of unknown function DUF1144; KEGG: rsp:RSP_3651 hypothetical protein YP_004119166.1 PFAM: O-methyltransferase family 3; KEGG: pjd:Pjdr2_5198 O-methyltransferase family 3 YP_004119167.1 KEGG: plu:plu3056 hypothetical protein YP_004119168.1 KEGG: plu:plu3055 hypothetical protein YP_004119169.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: avn:Avin_26460 NADP oxidoreductase, coenzyme F420-dependent protein YP_004119170.1 KEGG: gau:GAU_2858 glycerol-3-phosphate dehydrogenase YP_004119171.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pau:PA14_10840 putative dehydrogenase YP_004119172.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pau:PA14_10830 LysR family transcriptional regulator YP_004119173.1 KEGG: dda:Dd703_2588 hypothetical protein YP_004119174.1 KEGG: pct:PC1_3039 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004119175.1 KEGG: ddc:Dd586_3219 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: Helix-turn-helix, AraC domain YP_004119176.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_2309 transcriptional regulator, LysR family YP_004119177.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpu:KP1_3104 putative transport protein YP_004119178.1 PFAM: polysaccharide biosynthesis protein; KEGG: spe:Spro_1343 polysaccharide biosynthesis protein YP_004119179.1 KEGG: spe:Spro_2519 putative glycosyltransferase YP_004119180.1 KEGG: dze:Dd1591_2455 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease YP_004119181.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ctu:Ctu_1p00350 hypothetical protein YP_004119182.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gdi:GDI_2773 putative N-ethylmaleimide reductase, FMN-linked YP_004119183.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bph:Bphy_5165 short-chain dehydrogenase/reductase SDR YP_004119184.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: xau:Xaut_2934 enoyl-CoA hydratase/isomerase YP_004119185.1 PFAM: Glutathione S-transferase domain; KEGG: gdi:GDI_2774 putative glutathionine S-transferase YP_004119186.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gdi:GDI_2776 LysR family transcriptional regulator YP_004119187.1 KEGG: ilo:IL2067 DSBH domain-containing protein YP_004119188.1 PFAM: NADPH-dependent FMN reductase; KEGG: dra:DR_0624 hypothetical protein YP_004119189.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: kpu:KP1_2786 amino acid homoserine exporter YP_004119190.1 KEGG: pmr:PMI0404 GntR-family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004119191.1 PFAM: major facilitator superfamily MFS_1; KEGG: pmr:PMI0405 MFS-family transporter YP_004119192.1 PFAM: isochorismatase hydrolase; KEGG: pmr:PMI0406 hydrolase YP_004119193.1 PFAM: protein of unknown function DUF204; KEGG: eta:ETA_33770 hypothetical protein YP_004119195.1 KEGG: kpe:KPK_1527 hypothetical protein YP_004119196.1 PFAM: protein of unknown function DUF1471; KEGG: kpu:KP1_3089 hypothetical protein YP_004119197.1 KEGG: bid:Bind_2208 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004119198.1 KEGG: met:M446_4543 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004119199.1 KEGG: rru:Rru_A2088 amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004119200.1 KEGG: met:M446_4545 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004119201.1 KEGG: tcu:Tcur_3351 glycine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_004119202.1 KEGG: pwa:Pecwa_1573 hypothetical protein YP_004119203.1 KEGG: bvi:Bcep1808_3398 LysR family transcriptional regulator; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR YP_004119204.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cpi:Cpin_0148 glyoxalase/bleomycin resistance protein/dioxygenase YP_004119205.1 KEGG: fjo:Fjoh_3191 glyoxalase/bleomycin resistance protein/dioxygenase YP_004119206.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpu:KP1_2208 oxidoreductase YP_004119207.1 PFAM: alpha/beta hydrolase fold; KEGG: cti:RALTA_B0393 non-heme chloroperoxidase (chloride peroxidase) (CPO-F) (chloroperoxidase F) YP_004119208.1 KEGG: bgl:bglu_2g14830 hypothetical protein YP_004119209.1 KEGG: kpe:KPK_1527 hypothetical protein YP_004119210.1 PFAM: protein of unknown function DUF1471; KEGG: kpu:KP1_3089 hypothetical protein YP_004119211.1 KEGG: pct:PC1_0759 TonB family protein; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein YP_004119212.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: ddc:Dd586_0784 TonB-dependent receptor plug YP_004119213.1 PFAM: peptidase M16 domain protein; KEGG: pct:PC1_0761 peptidase M16 domain protein YP_004119214.1 KEGG: pwa:Pecwa_0999 ABC transporter domain protein; PFAM: ABC transporter domain protein; ABC transporter related; SMART: AAA ATPase YP_004119215.1 PFAM: protein of unknown function DUF1471; KEGG: kpe:KPK_1527 hypothetical protein YP_004119216.1 KEGG: kpe:KPK_2578 transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004119217.1 PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_1857 major facilitator superfamily MFS_1 YP_004119218.1 KEGG: ctu:Ctu_1p00960 hypothetical protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Ig family protein YP_004119219.1 KEGG: bvi:Bcep1808_1989 hypothetical protein YP_004119220.1 KEGG: hypothetical protein YP_004119221.1 KEGG: bth:BT_4344 putative DNA helicase YP_004119222.1 KEGG: cro:ROD_40491 hypothetical protein YP_004119223.1 KEGG: pwa:Pecwa_0570 hypothetical protein YP_004119224.1 KEGG: Mink1; misshapen-like kinase 1 (zebrafish); K04413 misshapen/NIK-related kinase YP_004119225.1 KEGG: pwa:Pecwa_0952 hypothetical protein YP_004119226.1 PFAM: Domain of unknown function DUF1814; KEGG: pwa:Pecwa_0953 domain of unknown function DUF1814 YP_004119227.1 PFAM: NifQ family protein; KEGG: kpe:KPK_1696 nitrogen fixation protein NifQ YP_004119228.1 TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; KEGG: kpe:KPK_1697 nitrogenase cofactor biosynthesis protein NifB; SMART: Elongator protein 3/MiaB/NifB YP_004119229.1 TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; KEGG: kpe:KPK_1698 Nif-specific regulatory protein; SMART: GAF domain protein; AAA ATPase YP_004119230.1 TIGRFAM: nitrogen fixation negative regulator NifL; PAS sensor protein; PFAM: PAS fold domain protein; ATP-binding region ATPase domain protein; KEGG: kpe:KPK_1699 nitrogen fixation negative regulator NifL; SMART: PAS domain containing protein; PAC repeat-containing protein YP_004119231.1 KEGG: dda:Dd703_0510 flavodoxin; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase YP_004119232.1 KEGG: kpe:KPK_1701 nitrogen fixation protein NifM; TIGRFAM: nitrogen fixation protein NifM; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase YP_004119233.1 PFAM: NifZ family protein; KEGG: eca:ECA2942 nitrogen fixation protein YP_004119234.1 KEGG: kpe:KPK_1703 putative NifW protein YP_004119235.1 KEGG: kpe:KPK_1704 homocitrate synthase; TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase YP_004119236.1 TIGRFAM: cysteine desulfurase NifS; KEGG: dda:Dd703_0504 cysteine desulfurase NifS; PFAM: aminotransferase class V YP_004119237.1 KEGG: dda:Dd703_0503 Fe-S cluster assembly protein NifU; TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein YP_004119238.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dda:Dd703_0499 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_004119239.1 TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; KEGG: dda:Dd703_0498 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1 YP_004119240.1 TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; KEGG: dda:Dd703_0497 nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1 YP_004119241.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: kpe:KPK_1710 NifY protein YP_004119242.1 KEGG: dda:Dd703_0494 nitrogen fixation protein FixT; TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU family protein YP_004119243.1 PFAM: oxidoreductase/nitrogenase component 1; manually curated; KEGG: kpe:KPK_1712 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain YP_004119244.1 TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; KEGG: kpe:KPK_1713 nitrogenase molybdenum-iron protein alpha chain; PFAM: oxidoreductase/nitrogenase component 1 YP_004119245.1 TIGRFAM: nitrogenase iron protein; KEGG: kpe:KPK_1714 nitrogenase iron protein; PFAM: NifH/frxC-family protein YP_004119246.1 KEGG: ebr:ECB_00647 hypothetical protein YP_004119247.1 KEGG: bgl:bglu_2g09350 hypothetical protein YP_004119248.1 KEGG: kpe:KPK_1527 hypothetical protein YP_004119249.1 KEGG: pay:PAU_00880 insecticidal toxin complex protein tccc2 YP_004119250.1 KEGG: cko:CKO_02600 hypothetical protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004119251.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc0144 transcription regulator protein YP_004119252.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: pct:PC1_0652 cupin 2 conserved barrel domain protein YP_004119253.1 PFAM: Glutathione S-transferase domain; KEGG: kpe:KPK_2590 glutathione S-transferase YP_004119254.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_2589 transcriptional regulator, LysR family YP_004119255.1 PFAM: major facilitator superfamily MFS_1; KEGG: bld:BLi03917 hypothetical protein YP_004119256.1 KEGG: etr:ETAE_1963 entry exclusion protein 2 YP_004119257.1 KEGG: cdl:CDR20291_2718 putative MarR-family regulatory protein YP_004119258.1 KEGG: cko:CKO_01682 outer membrane receptor FepA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004119259.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpe:KPK_1171 NAD dependent epimerase/dehydratase family YP_004119260.1 PFAM: protein of unknown function DUF1471; KEGG: kpe:KPK_1527 hypothetical protein YP_004119261.1 PFAM: Methionine synthase vitamin-B12 independent; KEGG: spe:Spro_3176 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase YP_004119262.1 PFAM: Domain of unknown function DUF1852; KEGG: pct:PC1_1465 domain of unknown function DUF1852 YP_004119263.1 PFAM: PfkB domain protein; KEGG: kpu:KP1_1434 fructokinase YP_004119264.1 PFAM: porin LamB type; KEGG: esa:ESA_03526 hypothetical protein YP_004119265.1 TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PTS system, maltose and glucose-specific subfamily, IIC subunit; KEGG: ctu:Ctu_04470 PTS system sucrose-specific EIIBC component; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004119266.1 TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; KEGG: esa:ESA_03528 hypothetical protein; SMART: glycoside hydrolase family 32 YP_004119267.1 TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: esa:ESA_03529 hypothetical protein; SMART: regulatory protein LacI YP_004119268.1 PFAM: nitroreductase; KEGG: aav:Aave_4019 nitroreductase YP_004119269.1 PFAM: Phosphoglycerate mutase; KEGG: kpe:KPK_2677 phosphoglycerate mutase family protein YP_004119270.1 KEGG: kpe:KPK_2676 hypothetical protein YP_004119271.1 KEGG: kpe:KPK_2675 hypothetical protein YP_004119272.1 KEGG: kpe:KPK_2674 hypothetical protein YP_004119273.1 KEGG: kpe:KPK_2673 nitrile hydratase, beta subunit; PFAM: nitrile hydratase beta subunit YP_004119274.1 TIGRFAM: nitrile hydratase, alpha subunit; KEGG: kpe:KPK_2672 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain YP_004119275.1 PFAM: Amidase; KEGG: kpe:KPK_2671 amidase YP_004119276.1 KEGG: pfs:PFLU3207 hypothetical protein YP_004119277.1 KEGG: aci:ACIAD1620 putative phenylacetaldoxime dehydratase; PFAM: Antibiotic biosynthesis monooxygenase YP_004119278.1 KEGG: aci:ACIAD1622 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004119279.1 PFAM: DinB family protein; KEGG: eca:ECA0612 hypothetical protein YP_004119280.1 PFAM: AAA-4 family protein; KEGG: sbp:Sbal223_0052 putative transcriptional regulator YP_004119281.1 KEGG: sen:SACE_2231 hypothetical protein YP_004119283.1 KEGG: stm:STM4320 putative regulatory protein; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_004119284.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: rpt:Rpal_5311 ethyl tert-butyl ether degradation EthD YP_004119285.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bgl:bglu_1g22510 putative carbohydrate ABC transporter, periplasmic sugar-binding protein YP_004119286.1 KEGG: bgl:bglu_1g22520 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004119287.1 PFAM: inner-membrane translocator; KEGG: bgl:bglu_1g22530 ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, permease protein YP_004119288.1 PFAM: inner-membrane translocator; KEGG: bgl:bglu_1g22540 ribose ABC transporter, permease protein YP_004119289.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: pna:Pnap_0554 acyl-CoA dehydrogenase type 2 YP_004119290.1 KEGG: pct:PC1_2694 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004119291.1 PFAM: MmgE/PrpD family protein; KEGG: pct:PC1_2695 MmgE/PrpD family protein YP_004119292.1 KEGG: pct:PC1_2696 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004119293.1 KEGG: pct:PC1_2697 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004119294.1 KEGG: pct:PC1_2698 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004119295.1 PFAM: aminotransferase class IV; KEGG: eca:ECA2971 putative branched-chain amino acid aminotransferase YP_004119296.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ent:Ent638_2017 GCN5-related N-acetyltransferase YP_004119297.1 KEGG: similar to pericentrin B YP_004119298.1 PFAM: initiator RepB protein; KEGG: kpe:KPK_A0025 initiator replication protein RepB YP_004119299.1 KEGG: ypp:YPDSF_4140 partitioning protein A YP_004119300.1 TIGRFAM: parB-like partition protein; PFAM: ParB family protein; ParB domain protein nuclease; KEGG: ecy:ECSE_P2-0015 partitioning protein ParB; SMART: ParB domain protein nuclease YP_004119301.1 PFAM: regulatory protein TetR; KEGG: dda:Dd703_2606 transcriptional regulator, TetR family YP_004119302.1 KEGG: dda:Dd703_2607 hypothetical protein YP_004119303.1 KEGG: bph:Bphy_4559 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004119304.1 KEGG: reh:H16_A1957 hypothetical protein YP_004119305.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: reh:H16_A1956 carbon-nitrogen hydrolase YP_004119306.1 KEGG: bxe:Bxe_A1409 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004119307.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bph:Bphy_4563 GCN5-related N-acetyltransferase YP_004119308.1 PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: azc:AZC_0069 putative selenophosphate synthetase-related protein YP_004119309.1 KEGG: msm:MSMEG_0570 hypothetical protein YP_004119310.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: syp:SYNPCC7002_A0662 potassium transporter, trk family protein YP_004119311.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rpi:Rpic_2037 propionyl-CoA synthetase YP_004119312.1 KEGG: hypothetical protein YP_004119313.1 KEGG: pwa:Pecwa_3725 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004119314.1 KEGG: pwa:Pecwa_3724 carbohydrate ABC transporter periplasmic-binding protein YP_004119315.1 KEGG: pwa:Pecwa_3723 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004119316.1 PFAM: inner-membrane translocator; KEGG: pwa:Pecwa_3722 inner-membrane translocator YP_004119317.1 PFAM: inner-membrane translocator; KEGG: pwa:Pecwa_3721 inner-membrane translocator YP_004119318.1 KEGG: pwa:Pecwa_3720 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_004119319.1 PFAM: ROK family protein; KEGG: pwa:Pecwa_3719 ROK family protein YP_004119320.1 PFAM: PfkB domain protein; KEGG: pwa:Pecwa_3718 ribokinase YP_004119321.1 KEGG: pwa:Pecwa_3724 carbohydrate ABC transporter periplasmic-binding protein YP_004119322.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: bbe:BBR47_15130 putative nucleosidase YP_004119323.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: ppu:PP_3229 periplasmic aliphatic sulfonate-binding protein, putative; SMART: extracellular solute-binding protein family 3 YP_004119324.1 PFAM: ThiJ/PfpI domain protein; KEGG: dze:Dd1591_1352 ThiJ/PfpI domain protein YP_004119325.1 PFAM: Aldehyde Dehydrogenase; KEGG: dze:Dd1591_1351 aldehyde dehydrogenase YP_004119326.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eca:ECA3561 LysR family transcriptional regulator YP_004119327.1 KEGG: plu:plu2511 hypothetical protein; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004119328.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmj:BMULJ_04352 D-galactonate transporter YP_004119329.1 PFAM: class II aldolase/adducin family protein; KEGG: pfl:PFL_3344 putative aldolase YP_004119330.1 KEGG: mrd:Mrad2831_3414 hypothetical protein YP_004119331.1 KEGG: mrd:Mrad2831_3408 Asp/Glu/hydantoin racemase; manually curated; PFAM: Asp/Glu/hydantoin racemase YP_004119332.1 PFAM: type III effector Hrp-dependent outers; KEGG: sil:SPO2561 YgbK domain-containing protein YP_004119333.1 KEGG: lch:Lcho_1134 hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel YP_004119334.1 PFAM: Tannase and feruloyl esterase; KEGG: kpe:KPK_5223 tannase/feruloyl esterase family protein YP_004119335.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_3269 transcriptional regulator, LysR family YP_004119336.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: kpe:KPK_3270 oxidoreductase, FAD/FMN-binding YP_004119337.1 PFAM: protein of unknown function DUF488; KEGG: sbc:SbBS512_E2045 hypothetical protein YP_004119338.1 KEGG: esa:ESA_01552 outer membrane receptor FepA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004119339.1 KEGG: hso:HS_1374 hypothetical protein YP_004119340.1 KEGG: hypothetical protein ; K01104 protein-tyrosine phosphatase YP_004119341.1 KEGG: mes:Meso_3899 twin-arginine translocation pathway signal YP_004119342.1 PFAM: outer membrane porin; KEGG: kpn:KPN_03359 putative outer membrane protein YP_004119343.1 KEGG: rme:Rmet_4289 nucleoside-diphosphate-sugar epimerase YP_004119344.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_C1336 major facilitator superfamily multidrug efflux transporter YP_004119345.1 KEGG: rlg:Rleg_1012 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004119346.1 PFAM: major facilitator superfamily MFS_1; KEGG: ami:Amir_3093 major facilitator superfamily MFS_1 YP_004119347.1 KEGG: hypothetical protein YP_004119348.1 KEGG: ecy:ECSE_P4-0001 hypothetical protein YP_004119349.1 PFAM: Cl- channel voltage-gated family protein; KEGG: kpe:KPK_0103 chloride transporter, chloride channel (ClC) family YP_004119350.1 KEGG: esa:ESA_02826 hypothetical protein YP_004119351.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: spe:Spro_3098 cupin 2 domain-containing protein YP_004119352.1 KEGG: ddc:Dd586_2863 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004119353.1 KEGG: cro:ROD_05181 acriflavin resistance protein A; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004119354.1 KEGG: ddc:Dd586_2861 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004119355.1 PFAM: protein of unknown function DUF1471; KEGG: ddc:Dd586_2860 protein of unknown function DUF1471 YP_004119356.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_17320 LysR-family transcriptional regulator YP_004119357.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: har:HEAR1610 putative alcohol dehydrogenase with NAD(P)-binding YP_004119358.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: npu:Npun_R0577 carboxymuconolactone decarboxylase YP_004119359.1 KEGG: xfa:XF1738 hypothetical protein YP_004119360.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: xfa:XF1737 hypothetical protein YP_004119361.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rso:RSc0215 short chain dehydrogenase YP_004119362.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: pct:PC1_1347 transcriptional antiterminator, BglG YP_004119363.1 PFAM: glycoside hydrolase family 1; KEGG: ent:Ent638_3965 glycoside hydrolase family protein YP_004119364.1 TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIA subunit; KEGG: pct:PC1_1349 PTS system, beta-glucoside-specific IIABC subunit; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004119365.1 KEGG: eta:ETA_04840 LacI-family transcriptional regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004119366.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: eta:ETA_04830 putative BglE protein (involved in beta-glucoside utilization) YP_004119367.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: pct:PC1_0010 PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC YP_004119368.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: eta:ETA_04810 BglI protein (involved in beta-glucoside utilization) YP_004119369.1 PFAM: glycoside hydrolase family 1; KEGG: eta:ETA_04790 BglA protein, 6-phospho-beta-glucosidase (involved in beta-glucoside utilization) YP_004119370.1 KEGG: dze:Dd1591_1878 HAD-superfamily hydrolase, subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004119371.1 KEGG: efa:EF1411 glycosy hydrolase family protein; PFAM: glycoside hydrolase family 4 YP_004119372.1 PFAM: major facilitator superfamily MFS_1; KEGG: sei:SPC_3668 alpha-ketoglutarate permease YP_004119373.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sei:SPC_3669 hypothetical protein YP_004119374.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: sei:SPC_3670 protein RpiR YP_004119375.1 PFAM: PfkB domain protein; KEGG: sei:SPC_3671 ribokinase YP_004119376.1 KEGG: sgr:SGR_1622 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004119377.1 KEGG: nml:Namu_4320 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004119378.1 PFAM: amine oxidase; KEGG: rop:ROP_05410 putative oxidoreductase YP_004119379.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_2681 oxidoreductase domain-containing protein YP_004119380.1 KEGG: ftn:FTN_0590 hypothetical protein YP_004119381.1 PFAM: protein of unknown function DUF201; KEGG: fal:FRAAL4655 hypothetical protein YP_004119382.1 PFAM: lipolytic protein G-D-S-L family; KEGG: rso:RS03054 hypothetical protein YP_004119383.1 PFAM: Carbamoyltransferase; KEGG: rso:RS03052 putative transferase protein YP_004119384.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: cpi:Cpin_5186 phytanoyl-CoA dioxygenase YP_004119385.1 PFAM: major facilitator superfamily MFS_1; KEGG: cai:Caci_5643 major facilitator superfamily MFS_1 YP_004119386.1 PFAM: protein of unknown function DUF1471; KEGG: kpe:KPK_1527 hypothetical protein YP_004119387.1 PFAM: dihydrodipicolinate synthetase; KEGG: bmr:BMI_II235 dihydrodipicolinate synthase family protein YP_004119388.1 KEGG: rha:RHA1_ro05285 dihydrodipicolinate synthase/N-acetylneuraminate lyase; PFAM: dihydrodipicolinate synthetase YP_004119389.1 KEGG: rxy:Rxyl_2259 proline racemase; PFAM: proline racemase YP_004119390.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sil:SPO1595 mandelate racemase/muconate lactonizing enzyme YP_004119391.1 PFAM: D-arabinono-14-lactone oxidase; FAD linked oxidase domain protein; KEGG: aau:AAur_4012 putative oxidoreductase, FAD-binding YP_004119392.1 KEGG: sme:SMa2197 ABC transporter, permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004119393.1 KEGG: rer:RER_33140 amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004119394.1 PFAM: Aldehyde Dehydrogenase; KEGG: bfa:Bfae_31630 NAD-dependent aldehyde dehydrogenase YP_004119395.1 PFAM: Aldehyde Dehydrogenase; KEGG: pfs:PFLU2370 putative aldehyde dehydrogenase YP_004119396.1 KEGG: sus:Acid_1340 alkylhydroperoxidase; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004119397.1 KEGG: bbt:BBta_4826 putative ribose ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004119398.1 PFAM: NHL repeat containing protein; KEGG: mlo:mll1723 hypothetical protein YP_004119399.1 PFAM: inner-membrane translocator; Strictosidine synthase, conserved region; KEGG: mlo:mll1724 permease protein of sugar ABC transporter YP_004119400.1 KEGG: mlo:mll1725 binding protein component of sugar ABC transporter YP_004119401.1 PFAM: inner-membrane translocator; KEGG: mlo:mll1727 permease protein of sugar ABC transporter YP_004119402.1 PFAM: 67-dimethyl-8-ribityllumazine synthase; KEGG: pde:Pden_4679 riboflavin synthase subunit beta YP_004119403.1 PFAM: putative sugar-binding domain protein; KEGG: eca:ECA0870 putative transcriptional regulator YP_004119404.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: efe:EFER_0433 conserved hypothetical protein, putative COG0287 YP_004119405.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: eca:ECA0868 hypothetical protein YP_004119406.1 KEGG: eca:ECA0867 putative triosephosphate isomerase; PFAM: triosephosphate isomerase YP_004119407.1 KEGG: eca:ECA0866 putative dihydroxyacetone kinase; PFAM: Dak kinase; Dak phosphatase YP_004119408.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0865 transport protein YP_004119409.1 KEGG: efe:EFER_0428 ribose-5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase YP_004119410.1 KEGG: eta:ETA_28160 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region YP_004119411.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pct:PC1_2683 transcriptional regulator, LysR family YP_004119412.1 PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_59000 putative transporter YP_004119413.1 KEGG: esa:ESA_00789 transaldolase A; TIGRFAM: transaldolase; PFAM: Transaldolase YP_004119414.1 KEGG: cdf:CD0209 putative sugar-phosphate kinase YP_004119415.1 KEGG: asu:Asuc_0587 PTS system, fructose subfamily, IIC subunit; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC YP_004119416.1 KEGG: asu:Asuc_0586 PTS system, fructose-specific, IIB subunnit; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit YP_004119417.1 KEGG: tau:Tola_1907 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; phosphoryl transfer system HPr; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_004119418.1 KEGG: eic:NT01EI_2690 hypothetical protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004119419.1 KEGG: ses:SARI_01861 putative hydrolase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_004119420.1 KEGG: cko:CKO_03041 putative fructose-like phosphotransferase EIIB subunit 3; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit YP_004119421.1 KEGG: tau:Tola_1897 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004119422.1 KEGG: lmf:LMOf2365_0661 putative fructose-like permease EIIC subunit 2; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC YP_004119423.1 KEGG: tau:Tola_1907 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising protein mobile region; PEP-utilising protein domain protein; phosphoryl transfer system HPr; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_004119424.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: psb:Psyr_3801 regulatory protein, LysR:LysR, substrate-binding YP_004119425.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: pfo:Pfl01_2473 ferredoxin YP_004119426.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bph:Bphy_6800 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_004119427.1 KEGG: bph:Bphy_6799 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I YP_004119428.1 PFAM: protein of unknown function DUF182; KEGG: spe:Spro_4020 hypothetical protein YP_004119429.1 KEGG: kpe:KPK_B0012 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: Helix-turn-helix, AraC domain YP_004119430.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpe:KPK_B0009 oxidoreductase, short chain dehydrogenase/reductase family YP_004119431.1 KEGG: esa:ESA_01868 hypothetical protein; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004119432.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: kpe:KPK_2326 translocator protein, LysE family YP_004119433.1 PFAM: Protein of unknown function DUF2241; KEGG: pfl:PFL_4824 hypothetical protein YP_004119434.1 PFAM: metallophosphoesterase; KEGG: esa:ESA_pESA3p05456 hypothetical protein YP_004119435.1 PFAM: protein of unknown function DUF924; KEGG: pmr:PMI1708 hypothetical protein YP_004119436.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_0639 LysR family transcriptional regulator YP_004119437.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_1996 major facilitator transporter YP_004119438.1 PFAM: Catalase related subgroup; KEGG: kpe:KPK_2233 catalase YP_004119439.1 PFAM: cytochrome B561; KEGG: kpe:KPK_2232 nickel-dependent hydrogenase, b-type cytochrome subunit family YP_004119440.1 KEGG: ctu:Ctu_15420 hypothetical protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004119441.1 KEGG: ctu:Ctu_15410 hypothetical protein YP_004119442.1 KEGG: ddc:Dd586_0958 ribosomal-protein-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004119443.1 KEGG: rpa:RPA3184 putative cylclic diguanylate phosphodiesterase (EAL); PFAM: EAL domain protein; SMART: EAL domain protein YP_004119444.1 KEGG: pwa:Pecwa_0431 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004119445.1 PFAM: alpha/beta hydrolase fold; KEGG: pwa:Pecwa_0430 homoserine O-acetyltransferase YP_004119446.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: yen:YE2047 putative hydrolase YP_004119447.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_1486 LysR family transcriptional regulator YP_004119448.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: kpe:KPK_4891 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004119449.1 KEGG: bph:Bphy_4805 hypothetical protein YP_004119450.1 PFAM: Auxin Efflux Carrier; KEGG: avn:Avin_48340 auxin efflux carrier family protein YP_004119451.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bav:BAV0675 LysR-family transcriptional regulator YP_004119452.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rsh:Rsph17029_3106 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004119453.1 PFAM: aminotransferase class IV; KEGG: rsk:RSKD131_3621 aminotransferase, class IV YP_004119454.1 PFAM: extracellular solute-binding protein family 5; KEGG: azc:AZC_2080 ABC transporter substrate binding protein YP_004119455.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2079 ABC transporter permease protein YP_004119456.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2078 ABC transporter permease protein YP_004119457.1 KEGG: rpt:Rpal_1407 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004119458.1 PFAM: Amidohydrolase 3; D-aminoacylase domain protein; KEGG: csa:Csal_0091 N-acyl-D-amino-acid deacylase YP_004119459.1 KEGG: sil:SPO1103 hypothetical protein YP_004119460.1 KEGG: kpn:KPN_01157 hypothetical protein YP_004119461.1 KEGG: bxe:Bxe_B2815 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004119462.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_1808 binding-protein-dependent transport systems inner membrane component YP_004119463.1 PFAM: Ketopantoate reductase ApbA/PanE domain protein; KEGG: bja:bll3147 2-dehydropantoate 2-reductase YP_004119464.1 KEGG: reu:Reut_B5822 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004119465.1 KEGG: pfo:Pfl01_2855 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004119466.1 KEGG: cgt:cgR_0516 hypothetical protein YP_004119467.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: tko:TK2166 ArgE/DapE-related deacylase YP_004119468.1 PFAM: peptidase M28; protease-associated PA domain protein; KEGG: ddr:Deide_1p01240 putative peptidase YP_004119469.1 KEGG: bbt:BBta_2107 putative hydantoin racemase HyuA YP_004119470.1 PFAM: amidohydrolase; KEGG: cth:Cthe_2207 isoaspartyl dipeptidase YP_004119471.1 PFAM: extracellular solute-binding protein family 1; KEGG: met:M446_4043 extracellular solute-binding protein YP_004119472.1 KEGG: azc:AZC_2725 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_004119473.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2722 ABC transporter permease protein YP_004119474.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_5050 binding-protein-dependent transport systems inner membrane component YP_004119475.1 PFAM: polysaccharide deacetylase; KEGG: azc:AZC_2736 polysaccharide deacetylase YP_004119476.1 KEGG: pfo:Pfl01_2855 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004119477.1 PFAM: polysaccharide deacetylase; KEGG: bbt:BBta_2100 hypothetical protein YP_004119478.1 PFAM: Integrase catalytic region; KEGG: dze:Dd1591_2648 integrase catalytic region YP_004119479.1 KEGG: hypothetical protein YP_004119480.1 PFAM: Hom_end-associated Hint domain protein; KEGG: hypothetical protein YP_004119481.1 PFAM: integrase family protein; KEGG: eoi:ECO111_p2-003 cyclization recombinase YP_004119482.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rfr:Rfer_2440 NAD-dependent epimerase/dehydratase YP_004119483.1 PFAM: major facilitator superfamily MFS_1; KEGG: rfr:Rfer_2443 major facilitator transporter YP_004119484.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: aap:NT05HA_2215 LysR protein YP_004119485.1 KEGG: mba:Mbar_A0767 nodulation protein L YP_004119486.1 KEGG: msu:MS1396 hypothetical protein YP_004119487.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: tau:Tola_1790 iron-containing alcohol dehydrogenase YP_004119488.1 PFAM: Saccharopine dehydrogenase; KEGG: ddc:Dd586_2868 short-chain dehydrogenase/reductase SDR YP_004119489.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: sbl:Sbal_4419 resolvase domain-containing protein YP_004119490.1 PFAM: transposase Tn3 family protein; KEGG: sbl:Sbal_2174 transposase Tn3 family protein YP_004119491.1 KEGG: pwa:Pecwa_0422 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_004119492.1 PFAM: PAS fold-4 domain protein; KEGG: pwa:Pecwa_0423 transcriptional regulator, LuxR family YP_004119493.1 KEGG: ddc:Dd586_2861 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004119494.1 PFAM: protein of unknown function DUF1471; KEGG: eta:ETA_33730 hypothetical protein YP_004119495.1 KEGG: pwa:Pecwa_3088 protein TolA YP_004119496.1 KEGG: dda:Dd703_3073 ATPase YP_004119497.1 KEGG: gme:Gmet_2447 hypothetical protein YP_004119498.1 PFAM: zinc finger DksA/TraR C4-type; KEGG: kpu:KP1_1789 hypothetical zinc-finger containing protein YP_004119499.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cef:CE2337 short chain dehydrogenase YP_004119500.1 PFAM: protein of unknown function DUF1526; KEGG: asa:ASA_P4G070 hypothetical protein YP_004119501.1 PFAM: extracellular solute-binding protein family 5; KEGG: sew:SeSA_A4069 HTH-type transcriptional regulator SgrR YP_004119502.1 PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: tau:Tola_2080 shikimate dehydrogenase substrate binding domain protein YP_004119503.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: yen:YE1291 putative PTS system protein YP_004119504.1 KEGG: stm:STM3775 putative glycosyl hydrolase; PFAM: glycoside hydrolase family 1 YP_004119505.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: cro:ROD_41171 putative PTS system protein, component EIIc; PFAM: phosphotransferase system EIIC YP_004119506.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: ent:Ent638_0038 phosphotransferase system, lactose/cellobiose-specific IIB subunit YP_004119507.1 KEGG: cro:ROD_41191 putative LacI-family transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_004119508.1 KEGG: yen:YE2832 hypothetical protein YP_004119509.1 TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIA subunit; KEGG: spe:Spro_2323 PTS system, beta-glucoside-specific IIABC subunit; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004119510.1 KEGG: spe:Spro_2324 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 1 YP_004119511.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: spe:Spro_2325 transcriptional antiterminator, BglG YP_004119512.1 PFAM: FAD dependent oxidoreductase; KEGG: pfo:Pfl01_4263 glucose-methanol-choline oxidoreductase YP_004119513.1 KEGG: pfo:Pfl01_4264 twin-arginine translocation pathway signal YP_004119514.1 KEGG: pfo:Pfl01_4265 cytochrome c, class I; PFAM: cytochrome c class I YP_004119515.1 KEGG: hypothetical protein YP_004119516.1 KEGG: dze:Dd1591_2830 6-phosphogluconolactonase; PFAM: Domain of unknown function DUF2394 YP_004119517.1 PFAM: class II aldolase/adducin family protein; KEGG: pfl:PFL_3344 putative aldolase YP_004119518.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmj:BMULJ_04352 D-galactonate transporter YP_004119519.1 KEGG: mrd:Mrad2831_3409 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004119520.1 KEGG: mrd:Mrad2831_3414 hypothetical protein YP_004119521.1 KEGG: mrd:Mrad2831_3410 L-lactate dehydrogenase (cytochrome); PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase YP_004119522.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: mrd:Mrad2831_3408 Asp/Glu/hydantoin racemase YP_004119523.1 PFAM: type III effector Hrp-dependent outers; KEGG: sil:SPO2561 YgbK domain-containing protein YP_004119524.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0839 major facilitator transporter YP_004119525.1 PFAM: aminotransferase class V; KEGG: kpu:KP1_2809 serine-pyruvate aminotransferase YP_004119526.1 KEGG: bcm:Bcenmc03_6208 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004119527.1 KEGG: bcm:Bcenmc03_6209 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004119528.1 KEGG: bch:Bcen2424_6612 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004119529.1 KEGG: bcm:Bcenmc03_6211 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004119530.1 KEGG: bch:Bcen2424_6614 hypothetical protein YP_004119531.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bch:Bcen2424_6615 BFD/(2Fe-2S)-binding domain-containing protein YP_004119532.1 PFAM: FAD dependent oxidoreductase; KEGG: bch:Bcen2424_6616 FAD dependent oxidoreductase YP_004119533.1 PFAM: dihydrodipicolinate synthetase; KEGG: bch:Bcen2424_6617 dihydrodipicolinate synthetase YP_004119534.1 KEGG: bch:Bcen2424_6618 dihydropyrimidinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase YP_004119535.1 KEGG: bph:Bphy_3107 FmdB family regulatory protein; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB YP_004119536.1 KEGG: bcm:Bcenmc03_6206 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004119537.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: pmy:Pmen_2182 filamentation induced by cAMP protein Fic YP_004119538.1 KEGG: tau:Tola_0221 ROK family protein YP_004119539.1 PFAM: protein of unknown function DUF1593; KEGG: tau:Tola_0222 protein of unknown function DUF1593 YP_004119540.1 PFAM: glycosyl transferase family 9; KEGG: tye:THEYE_A0426 glycosyl transferase, family 9 YP_004119541.1 KEGG: eca:ECA1308 LPS-assembly lipoprotein RlpB; manually curated; PFAM: Rare lipoprotein B YP_004119542.1 KEGG: cko:CKO_01682 outer membrane receptor FepA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004119543.1 KEGG: similar to chromosome 3 open reading frame 63 YP_004119544.1 PFAM: protein of unknown function DUF1493; KEGG: ctu:Ctu_08630 hypothetical protein YP_004119545.1 KEGG: bur:Bcep18194_A5654 glycosyl transferase family protein YP_004119546.1 KEGG: sgl:SG1935 outer membrane protein assembly factor YaeT; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein YP_004119547.1 KEGG: yen:YEP0073 putative resolvase/recombinase; manually curated; PFAM: integrase family protein YP_004119548.1 KEGG: cro:ROD_p1511 putative plasmid partition protein YP_004119549.1 PFAM: Integrase catalytic region; KEGG: ddc:Dd586_2844 transposase IS3/IS911 family protein YP_004119550.1 PFAM: transposase IS3/IS911 family protein; KEGG: dda:Dd703_3081 transposase IS3/IS911 family protein YP_004119551.1 KEGG: ypp:YPDSF_0215 hypothetical protein; TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein YP_004119552.1 KEGG: esa:ESA_pESA3p05511 hypothetical protein YP_004119553.1 KEGG: hypothetical protein YP_004119554.1 PFAM: putative transposase YhgA family protein; KEGG: stm:PSLT051 putative cytoplasmic protein YP_004119555.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: sbl:Sbal_4419 resolvase domain-containing protein YP_004119556.1 PFAM: CsbD family protein; KEGG: cko:CKO_03869 putative stress-response protein YP_004119557.1 KEGG: ent:Ent638_1756 hypothetical protein YP_004119558.1 KEGG: cai:Caci_3473 erythronolide synthase YP_004119559.1 KEGG: eta:ETA_19180 conserved hypothetical protein YcgZ YP_004119560.1 KEGG: eta:ETA_19190 hypothetical protein YP_004119561.1 KEGG: ctu:Ctu_1p00260 regulatory protein AriR YP_004119562.1 KEGG: bgr:Bgr_14380 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_004119563.1 KEGG: eta:ETA_19190 hypothetical protein YP_004119564.1 PFAM: Integrase catalytic region; transposase IS3/IS911 family protein; KEGG: aeh:Mlg_1532 integrase catalytic subunit YP_004119565.1 KEGG: eic:NT01EI_2038 hypothetical protein YP_004119566.1 KEGG: eic:NT01EI_2039 hypothetical protein YP_004119567.1 PFAM: FRG domain protein; KEGG: rru:Rru_A0303 hypothetical protein YP_004119568.1 KEGG: eic:NT01EI_2309 hypothetical protein; PFAM: ATPase; SMART: AAA ATPase YP_004119569.1 KEGG: ent:Ent638_2275 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004119570.1 KEGG: ent:Ent638_2274 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004119571.1 KEGG: sdl:Sdel_1419 hypothetical protein YP_004119572.1 KEGG: ppe:PEPE_0736 tRNA delta(2)-isopentenylpyrophosphate transferase YP_004119573.1 KEGG: sse:Ssed_3124 inosine 5'-monophosphate dehydrogenase YP_004119574.1 KEGG: spq:SPAB_05406 hypothetical protein YP_004119575.1 PFAM: integrase family protein; KEGG: efe:pEFER_0057 resolvase (protein D) YP_004119576.1 KEGG: cro:ROD_p1511 putative plasmid partition protein YP_004119577.1 KEGG: seh:SeHA_A0033 putative 60 kDa chaperonin YP_004119578.1 KEGG: rca:Rcas_3443 hypothetical protein YP_004119579.1 KEGG: pfs:pQBR0115 hypothetical protein YP_004119580.1 KEGG: stm:PSLT054 DNA polymerase V subunit UmuC; PFAM: UMUC domain protein DNA-repair protein YP_004119581.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: stm:PSLT055 SamA YP_004119582.1 PFAM: protein of unknown function DUF1281; KEGG: ecw:EcE24377A_C0015 hypothetical protein YP_004119583.1 KEGG: stm:PSLT056 putative cytoplasmic protein YP_004119584.1 KEGG: stm:PSLT057 putative cytoplasmic protein YP_004119585.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: asa:ASA_P5G137 putative methylase YP_004119586.1 KEGG: sec:SC129 hypothetical protein YP_004119587.1 PFAM: Antirestriction protein; KEGG: kpn:KPN_pKPN3p05977 hypothetical protein YP_004119588.1 KEGG: stm:PSLT060.1N hypothetical protein YP_004119589.1 KEGG: similar to SET domain containing 1A; K11422 histone-lysine N-methyltransferase SETD1; histone-lysine N-methyltransferase SETD1-like protein YP_004119590.1 KEGG: ton:TON_0332 hypothetical transcription regulator YP_004119591.1 KEGG: eta:ETA_pET460470 hypothetical protein YP_004119593.1 KEGG: eta:ETA_pET460480 hypothetical protein YP_004119594.1 KEGG: sde:Sde_3956 zinc-containing alcohol dehydrogenase family protein YP_004119595.1 KEGG: similar to Zyxin (Zyxin-2); K06273 zyxin; zyxin-like protein YP_004119596.1 KEGG: bbr:BB2836 hypothetical protein YP_004119597.1 PFAM: Lytic transglycosylase catalytic; KEGG: ent:Ent638_4280 lytic transglycosylase, catalytic YP_004119598.1 KEGG: ent:Ent638_4281 hypothetical protein YP_004119599.1 KEGG: ent:Ent638_4282 hypothetical protein YP_004119600.1 PFAM: TraA family protein; KEGG: eta:ETA_pET450090 TraA protein YP_004119601.1 KEGG: ent:Ent638_4284 conjugal transfer pilus assembly protein TraL; TIGRFAM: type IV conjugative transfer system protein TraL; PFAM: TraL family protein YP_004119602.1 PFAM: TraE family protein; KEGG: ent:Ent638_4285 TraE family protein YP_004119603.1 KEGG: ent:Ent638_4286 conjugal transfer protein TraK; TIGRFAM: type-F conjugative transfer system secretin TraK; PFAM: TraK family protein YP_004119604.1 PFAM: TraB pilus assembly family protein; KEGG: ent:Ent638_4287 conjugal transfer pilus assembly protein TraB YP_004119605.1 TIGRFAM: transcriptional activator RfaH; PFAM: NGN domain protein; KEGG: kpu:KP1_0199 transcriptional activator; SMART: NGN domain protein YP_004119606.1 KEGG: svi:Svir_36350 arabinose efflux permease family protein YP_004119607.1 KEGG: kra:Krad_1453 protein of unknown function DUF477 YP_004119609.1 KEGG: ent:Ent638_4289 conjugal transfer protein TraV; TIGRFAM: type IV conjugative transfer system protein TraV; PFAM: Type IV conjugative transfer system protein TraV YP_004119610.1 KEGG: nar:Saro_3598 AMP-dependent synthetase and ligase YP_004119611.1 TIGRFAM: type-IV secretion system protein TraC; KEGG: ent:Ent638_4290 conjugal transfer ATP-binding protein TraC YP_004119612.1 PFAM: Type-F conjugative transfer system protein TrbI; KEGG: ent:Ent638_4291 hypothetical protein YP_004119613.1 TIGRFAM: type-F conjugative transfer system protein TraW; KEGG: ent:Ent638_4292 conjugal transfer pilus assembly protein TraW YP_004119614.1 KEGG: mma:MM_0063 surface layer protein B YP_004119615.1 KEGG: pjd:Pjdr2_5300 cytochrome c oxidase assembly factor CtaG YP_004119616.1 KEGG: ent:Ent638_4295 hypothetical protein YP_004119617.1 PFAM: TraU family protein; KEGG: ent:Ent638_4296 conjugal transfer pilus assembly protein TraU YP_004119618.1 KEGG: ent:Ent638_4297 hypothetical protein; TIGRFAM: type-F conjugative transfer system pilin assembly protein TrbC; PFAM: Type-F conjugative transfer system pilin assembly protein TrbC YP_004119619.1 KEGG: ent:Ent638_4298 conjugal transfer mating pair stabilization protein TraN YP_004119620.1 TIGRFAM: type-F conjugative transfer system pilin assembly protein TraF; KEGG: ent:Ent638_4299 conjugal pilus assembly protein TraF YP_004119621.1 KEGG: gvi:gll1276 hypothetical protein YP_004119622.1 KEGG: sro:Sros_3894 major facilitator superfamily MFS_1 YP_004119623.1 KEGG: ent:Ent638_4301 conjugal transfer protein TrbB YP_004119624.1 KEGG: pvi:Cvib_0163 ammonium transporter YP_004119625.1 PFAM: TraH family protein; KEGG: ent:Ent638_4303 conjugal transfer pilus assembly protein TraH YP_004119626.1 PFAM: TraG domain protein; KEGG: ent:Ent638_4304 conjugal transfer mating pair stabilization protein TraG YP_004119627.1 KEGG: sml:Smlt4688 putative efflux membrane protein YP_004119628.1 PFAM: TraT complement resistance family protein; KEGG: sec:SCV36 conjugal transfer surface exclusion protein TraT YP_004119629.1 KEGG: hypothetical protein YP_004119630.1 KEGG: nfa:nfa19350 putative transporter YP_004119631.1 KEGG: ent:Ent638_4308 type IV secretory pathway VirD4 components-like protein; TIGRFAM: type IV conjugative transfer system coupling protein TraD; PFAM: Type IV secretion-system, TraD, DNA-binding domain; TRAG family protein YP_004119632.1 KEGG: ent:Ent638_4309 exonuclease V subunit alpha; TIGRFAM: conjugative transfer relaxase protein TraI; conjugative relaxase domain protein; PFAM: TrwC relaxase; DNA helicase TraI YP_004119633.1 PFAM: DSBA oxidoreductase; KEGG: kpe:KPK_5155 DsbA-like thioredoxin domain protein YP_004119634.1 manually curated; KEGG: yen:YEP0097 replication initiation protein YP_004119635.1 KEGG: hypothetical protein YP_004119636.1 KEGG: tfu:Tfu_1608 putative xylose repressor YP_004119637.1 PFAM: initiator RepB protein; KEGG: sty:HCM1.64 replication initiation protein YP_004119638.1 KEGG: eta:ETA_24890 hemolysin expression-modulating protein; manually curated; PFAM: Haemolysin expression modulating family protein YP_004119639.1 KEGG: sew:SeSA_B0126 phospholipase D (PLD) family protein YP_004119640.1 PFAM: protein of unknown function DUF1173; KEGG: pag:PLES_23741 phage minor tail protein L YP_004119641.1 KEGG: sml:Smlt2983 hypothetical protein; manually curated; PFAM: helix-turn-helix HxlR type YP_004119642.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: smt:Smal_2429 NAD(P)H dehydrogenase (quinone) YP_004119643.1 PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: bbt:BBta_0027 putative aspartate/ornithine carbamoyltransferase family protein YP_004119644.1 PFAM: transposase IS66; KEGG: cro:ROD_p1551 ISCro1 transposase C YP_004119645.1 PFAM: IS66 Orf2 family protein; KEGG: eoj:ECO26_5474 hypothetical protein YP_004119646.1 PFAM: transposase IS3/IS911 family protein; KEGG: cro:ROD_p1571 ISCro1 transposase A YP_004119647.1 KEGG: ctu:Ctu_3p00180 hypothetical protein YP_004119648.1 KEGG: ctu:Ctu_3p00190 hypothetical protein YP_004119649.1 KEGG: spe:Spro_4949 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004119650.1 PFAM: Protein of unknown function DUF2136; KEGG: spe:Spro_4950 hypothetical protein YP_004119651.1 KEGG: sfv:SFV_0337 ISEhe3 orfB; manually curated; PFAM: Integrase catalytic region YP_004119652.1 PFAM: Tannase and feruloyl esterase; KEGG: kpu:KP1_0309 putative hydrolase YP_004119653.1 PFAM: protein of unknown function DUF481; KEGG: sgl:SG0785 hypothetical protein YP_004119654.1 PFAM: transposase IS66; KEGG: eoj:ECO26_5473 hypothetical protein YP_004119655.1 PFAM: IS66 Orf2 family protein; KEGG: eoj:ECO26_5474 hypothetical protein YP_004119656.1 PFAM: transposase IS3/IS911 family protein; KEGG: eoj:ECO26_5475 hypothetical protein