-- dump date 20140619_224317 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type NP_950253.1 39938487 2672921 1..1524 1 NC_005303.2 identified by sequence similarity; putative; chromosomal replication initiator protein 1524 dnaA 2672921 dnaA Onion yellows phytoplasma OY-M chromosomal replication initiator protein NP_950253.1 1 D 262768 CDS NP_950254.1 39938488 2673253 1831..2967 1 NC_005303.2 identified by sequence similarity; putative; DNA polymerase III beta subunit 2967 dnaN 2673253 dnaN Onion yellows phytoplasma OY-M DNA polymerase III beta subunit NP_950254.1 1831 D 262768 CDS NP_950255.1 39938489 2672970 4447..4866 1 NC_005303.2 possible pseudogene of DotG homolog; identified by sequence similarity; hypothetical protein 4866 2672970 PAM_003 Onion yellows phytoplasma OY-M hypothetical protein NP_950255.1 4447 D 262768 CDS NP_950256.1 39938490 2672896 4948..5220 1 NC_005303.2 possible pseudogene of DotG homolog; identified by sequence similarity; hypothetical protein 5220 2672896 PAM_004 Onion yellows phytoplasma OY-M hypothetical protein NP_950256.1 4948 D 262768 CDS NP_950257.1 39938491 2673018 complement(5467..6222) 1 NC_005303.2 identified by sequence similarity; putative; membrane-associated phospholipid phosphatase 6222 pgpB 2673018 pgpB Onion yellows phytoplasma OY-M membrane-associated phospholipid phosphatase NP_950257.1 5467 R 262768 CDS NP_950258.1 39938492 2672897 complement(6431..7063) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 7063 2672897 PAM_006 Onion yellows phytoplasma OY-M hypothetical protein NP_950258.1 6431 R 262768 CDS NP_950259.1 39938493 2673630 7660..8976 1 NC_005303.2 identified by sequence similarity; putative; folylpolyglutamate synthase 8976 folC 2673630 folC Onion yellows phytoplasma OY-M folylpolyglutamate synthase NP_950259.1 7660 D 262768 CDS NP_950260.1 39938494 2673405 10428..11675 1 NC_005303.2 identified by sequence similarity; putative; 1,2-diacylglycerol 3-glucosyltransferase 11675 rfaG 2673405 rfaG Onion yellows phytoplasma OY-M 1,2-diacylglycerol 3-glucosyltransferase NP_950260.1 10428 D 262768 CDS NP_950261.3 380343397 2673045 12171..12509 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S6 12509 rpsF 2673045 rpsF Onion yellows phytoplasma OY-M ribosomal protein S6 NP_950261.3 12171 D 262768 CDS NP_950262.1 39938496 2673324 12524..12868 1 NC_005303.2 identified by sequence similarity; putative; single-stranded DNA-binding protein 12868 ssb 2673324 ssb Onion yellows phytoplasma OY-M single-stranded DNA-binding protein NP_950262.1 12524 D 262768 CDS NP_950263.1 39938497 2673664 13006..13245 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S18 13245 rpsR 2673664 rpsR Onion yellows phytoplasma OY-M ribosomal protein S18 NP_950263.1 13006 D 262768 CDS NP_950264.1 39938498 2672989 13316..15889 1 NC_005303.2 identified by sequence similarity; putative; exopolyphosphatase-related protein 15889 2672989 PAM_012 Onion yellows phytoplasma OY-M exopolyphosphatase-related protein NP_950264.1 13316 D 262768 CDS NP_950265.1 39938499 2672922 15886..17229 1 NC_005303.2 identified by sequence similarity; putative; replicative DNA helicase 17229 dnaB 2672922 dnaB Onion yellows phytoplasma OY-M replicative DNA helicase NP_950265.1 15886 D 262768 CDS NP_950266.1 39938500 2673110 17300..18355 1 NC_005303.2 identified by sequence similarity; putative; protein chain release factor A 18355 prfA 2673110 prfA Onion yellows phytoplasma OY-M protein chain release factor A NP_950266.1 17300 D 262768 CDS NP_950267.1 39938501 2673577 18448..19005 1 NC_005303.2 identified by sequence similarity; putative; translation factor 19005 sua5 2673577 sua5 Onion yellows phytoplasma OY-M translation factor NP_950267.1 18448 D 262768 CDS NP_950268.1 39938502 2673326 complement(19044..20015) 1 NC_005303.2 identified by sequence similarity; putative; DNA polymerase III delta subunit 20015 holA 2673326 holA Onion yellows phytoplasma OY-M DNA polymerase III delta subunit NP_950268.1 19044 R 262768 CDS NP_950269.1 39938503 2673612 20275..20865 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 20865 2673612 PAM_017 Onion yellows phytoplasma OY-M hypothetical protein NP_950269.1 20275 D 262768 CDS NP_950270.1 39938504 2672931 21671..23713 1 NC_005303.2 identified by sequence similarity; putative; valyl-tRNA synthetase 23713 valS 2672931 valS Onion yellows phytoplasma OY-M valyl-tRNA synthetase NP_950270.1 21671 D 262768 CDS NP_950271.1 39938505 2672899 23899..24366 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 24366 2672899 PAM_019 Onion yellows phytoplasma OY-M hypothetical protein NP_950271.1 23899 D 262768 CDS NP_950272.1 39938506 2673157 24424..26190 1 NC_005303.2 identified by sequence similarity; putative; ABC-type cobalt transport system, ATPase 26190 cbiO 2673157 cbiO Onion yellows phytoplasma OY-M ABC-type cobalt transport system, ATPase NP_950272.1 24424 D 262768 CDS NP_950273.1 39938507 2672900 27755..28120 1 NC_005303.2 identified by Glimmer2; hypothetical protein 28120 2672900 PAM_021 Onion yellows phytoplasma OY-M hypothetical protein NP_950273.1 27755 D 262768 CDS NP_950274.1 39938508 2673277 28890..29273 1 NC_005303.2 identified by sequence similarity; putative; ABC-type dipeptide/oligopeptide transport system, permease component 29273 dppB 2673277 dppB Onion yellows phytoplasma OY-M ABC-type dipeptide/oligopeptide transport system, permease component NP_950274.1 28890 D 262768 CDS NP_950275.1 39938509 2672901 29578..30684 1 NC_005303.2 identified by Glimmer2; hypothetical protein 30684 2672901 PAM_023 Onion yellows phytoplasma OY-M hypothetical protein NP_950275.1 29578 D 262768 CDS NP_950276.1 39938510 2673051 30946..31737 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 31737 2673051 PAM_024 Onion yellows phytoplasma OY-M hypothetical protein NP_950276.1 30946 D 262768 CDS NP_950277.1 39938511 2673625 32258..33295 1 NC_005303.2 identified by sequence similarity; putative; ABC-type dipeptide/oligopeptide transport system, ATPase component 33295 dppD 2673625 dppD Onion yellows phytoplasma OY-M ABC-type dipeptide/oligopeptide transport system, ATPase component NP_950277.1 32258 D 262768 CDS NP_950278.1 39938512 2672969 33626..34087 1 NC_005303.2 identified by sequence similarity; putative; ABC-type dipeptide/oligopeptide transport system, ATPase component 34087 oppF 2672969 oppF Onion yellows phytoplasma OY-M ABC-type dipeptide/oligopeptide transport system, ATPase component NP_950278.1 33626 D 262768 CDS NP_950279.1 39938513 2673052 complement(34179..37277) 1 NC_005303.2 identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum; hypothetical protein 37277 2673052 PAM_027 Onion yellows phytoplasma OY-M hypothetical protein NP_950279.1 34179 R 262768 CDS NP_950280.1 39938514 2673072 37635..38057 1 NC_005303.2 identified by sequence similarity; putative; small heat shock protein; molecular chaperone 38057 ibpA 2673072 ibpA Onion yellows phytoplasma OY-M molecular chaperone NP_950280.1 37635 D 262768 CDS NP_950281.1 39938515 2673053 complement(38180..38635) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 38635 2673053 PAM_029 Onion yellows phytoplasma OY-M hypothetical protein NP_950281.1 38180 R 262768 CDS NP_950282.1 39938516 2673365 complement(38845..41607) 1 NC_005303.2 identified by sequence similarity; putative; cation transport ATPase 41607 mgtA 2673365 mgtA Onion yellows phytoplasma OY-M cation transport ATPase NP_950282.1 38845 R 262768 CDS NP_950283.1 39938517 2673054 42625..43755 1 NC_005303.2 identified by Glimmer2; hypothetical protein 43755 2673054 PAM_031 Onion yellows phytoplasma OY-M hypothetical protein NP_950283.1 42625 D 262768 CDS NP_950284.1 39938518 2673255 44868..45518 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 45518 2673255 PAM_032 Onion yellows phytoplasma OY-M hypothetical protein NP_950284.1 44868 D 262768 CDS NP_950285.1 39938519 2673256 45800..46258 1 NC_005303.2 identified by Glimmer2; hypothetical protein 46258 2673256 PAM_033 Onion yellows phytoplasma OY-M hypothetical protein NP_950285.1 45800 D 262768 CDS NP_950286.1 39938520 2673257 46529..47068 1 NC_005303.2 identified by Glimmer2; hypothetical protein 47068 2673257 PAM_034 Onion yellows phytoplasma OY-M hypothetical protein NP_950286.1 46529 D 262768 CDS NP_950287.1 39938521 2673258 47948..48301 1 NC_005303.2 identified by Glimmer2; hypothetical protein 48301 2673258 PAM_035 Onion yellows phytoplasma OY-M hypothetical protein NP_950287.1 47948 D 262768 CDS NP_950288.1 39938522 2673116 48277..48939 1 NC_005303.2 identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum; hypothetical protein 48939 2673116 PAM_036 Onion yellows phytoplasma OY-M hypothetical protein NP_950288.1 48277 D 262768 CDS NP_950289.1 39938523 2673421 48879..49766 1 NC_005303.2 identified by sequence similarity; putative; chromosome segregation ATPase 49766 smc 2673421 smc Onion yellows phytoplasma OY-M chromosome segregation ATPase NP_950289.1 48879 D 262768 CDS NP_950290.1 39938524 2673117 50195..50506 1 NC_005303.2 identified by Glimmer2; hypothetical protein 50506 2673117 PAM_038 Onion yellows phytoplasma OY-M hypothetical protein NP_950290.1 50195 D 262768 CDS NP_950291.1 39938525 2673118 50922..52589 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 52589 2673118 PAM_039 Onion yellows phytoplasma OY-M hypothetical protein NP_950291.1 50922 D 262768 CDS NP_950292.1 39938526 2673465 52707..53312 1 NC_005303.2 identified by sequence similarity; putative; DNA-directed RNA polymerase specialized sigma 53312 fliA 2673465 fliA Onion yellows phytoplasma OY-M DNA-directed RNA polymerase specialized sigma NP_950292.1 52707 D 262768 CDS NP_950293.1 39938527 2673341 53544..53873 1 NC_005303.2 identified by sequence similarity; putative; single-stranded DNA-binding protein 53873 ssb 2673341 ssb Onion yellows phytoplasma OY-M single-stranded DNA-binding protein NP_950293.1 53544 D 262768 CDS NP_950294.1 39938528 2673533 54352..55011 1 NC_005303.2 identified by sequence similarity; putative; site-specific DNA methylase 55011 dam 2673533 dam Onion yellows phytoplasma OY-M site-specific DNA methylase NP_950294.1 54352 D 262768 CDS NP_950295.1 39938529 2673221 55120..55410 1 NC_005303.2 identified by sequence similarity; putative; bacterial nucleoid DNA-binding protein 55410 himA 2673221 himA Onion yellows phytoplasma OY-M bacterial nucleoid DNA-binding protein NP_950295.1 55120 D 262768 CDS NP_950296.1 39938530 2673119 55772..56566 1 NC_005303.2 possible pseudogene of ATP-dependent Zn proteaseHflB (FtsH); identified by sequence similarity; hypothetical protein 56566 2673119 PAM_044 Onion yellows phytoplasma OY-M hypothetical protein NP_950296.1 55772 D 262768 CDS NP_950297.1 39938531 2673336 56624..57805 1 NC_005303.2 identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum; hypothetical protein 57805 2673336 PAM_045 Onion yellows phytoplasma OY-M hypothetical protein NP_950297.1 56624 D 262768 CDS NP_950298.1 39938532 2673523 58212..59057 1 NC_005303.2 identified by Glimmer2; hypothetical protein 59057 2673523 PAM_046 Onion yellows phytoplasma OY-M hypothetical protein NP_950298.1 58212 D 262768 CDS NP_950299.1 39938533 2673524 58996..60171 1 NC_005303.2 identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum; hypothetical protein 60171 2673524 PAM_047 Onion yellows phytoplasma OY-M hypothetical protein NP_950299.1 58996 D 262768 CDS NP_950300.1 39938534 2673525 60238..60963 1 NC_005303.2 identified by Glimmer2; hypothetical protein 60963 2673525 PAM_048 Onion yellows phytoplasma OY-M hypothetical protein NP_950300.1 60238 D 262768 CDS NP_950301.1 39938535 2673086 61011..61388 1 NC_005303.2 identified by Glimmer2; hypothetical protein 61388 2673086 PAM_049 Onion yellows phytoplasma OY-M hypothetical protein NP_950301.1 61011 D 262768 CDS NP_950302.1 39938536 2673087 61925..62146 1 NC_005303.2 identified by sequence similarity; putative; similar to ORF A of Phytoplasma sp.; hypothetical protein 62146 2673087 PAM_050 Onion yellows phytoplasma OY-M hypothetical protein NP_950302.1 61925 D 262768 CDS NP_950303.1 39938537 2673088 62166..63443 1 NC_005303.2 possible pseudogene of ATP-dependent DNA helicase (UvrD); identified by sequence similarity; hypothetical protein 63443 2673088 PAM_051 Onion yellows phytoplasma OY-M hypothetical protein NP_950303.1 62166 D 262768 CDS NP_950304.1 39938538 2673089 63851..65281 1 NC_005303.2 identified by Glimmer2; hypothetical protein 65281 2673089 PAM_052 Onion yellows phytoplasma OY-M hypothetical protein NP_950304.1 63851 D 262768 CDS NP_950305.1 39938539 2673090 65858..66352 1 NC_005303.2 identified by Glimmer2; hypothetical protein 66352 2673090 PAM_053 Onion yellows phytoplasma OY-M hypothetical protein NP_950305.1 65858 D 262768 CDS NP_950306.1 39938540 2672937 67342..69651 1 NC_005303.2 identified by sequence similarity; putative; ribonucleotide reductase alpha subunit 69651 nrdA 2672937 nrdA Onion yellows phytoplasma OY-M ribonucleotide reductase alpha subunit NP_950306.1 67342 D 262768 CDS NP_950307.1 39938541 2672938 70037..71089 1 NC_005303.2 identified by sequence similarity; putative; ribonucleotide reductase beta subunit 71089 nrdF 2672938 nrdF Onion yellows phytoplasma OY-M ribonucleotide reductase beta subunit NP_950307.1 70037 D 262768 CDS NP_950308.1 39938542 2673328 73506..73904 1 NC_005303.2 identified by Glimmer2; hypothetical protein 73904 2673328 PAM_056 Onion yellows phytoplasma OY-M hypothetical protein NP_950308.1 73506 D 262768 CDS NP_950309.1 39938543 2673329 74018..74953 1 NC_005303.2 identified by Glimmer2; hypothetical protein 74953 2673329 PAM_057 Onion yellows phytoplasma OY-M hypothetical protein NP_950309.1 74018 D 262768 CDS NP_950310.1 39938544 2673104 75777..76295 1 NC_005303.2 identified by sequence similarity; putative; large-conductance mechanosensitive channel 76295 mscL 2673104 mscL Onion yellows phytoplasma OY-M large-conductance mechanosensitive channel NP_950310.1 75777 D 262768 CDS NP_950311.1 39938545 2673154 76501..78225 1 NC_005303.2 identified by sequence similarity; putative; ABC-type multidrug/protein/lipid transport system, ATPase component 78225 mdlB 2673154 mdlB Onion yellows phytoplasma OY-M ABC-type multidrug/protein/lipid transport system, ATPase component NP_950311.1 76501 D 262768 CDS NP_950312.1 39938546 2673330 80717..81424 1 NC_005303.2 identified by Glimmer2; hypothetical protein 81424 2673330 PAM_060 Onion yellows phytoplasma OY-M hypothetical protein NP_950312.1 80717 D 262768 CDS NP_950313.1 39938547 2673331 81782..82084 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 82084 2673331 PAM_061 Onion yellows phytoplasma OY-M hypothetical protein NP_950313.1 81782 D 262768 CDS NP_950314.1 39938548 2673372 83133..83315 1 NC_005303.2 possible pseudogene of single-stranded DNA-binding protein (ssb); identified by sequence similarity; hypothetical protein 83315 2673372 PAM_062 Onion yellows phytoplasma OY-M hypothetical protein NP_950314.1 83133 D 262768 CDS NP_950315.1 39938549 2673675 83594..83884 1 NC_005303.2 identified by sequence similarity; putative; bacterial nucleoid DNA-binding protein 83884 himA 2673675 himA Onion yellows phytoplasma OY-M bacterial nucleoid DNA-binding protein NP_950315.1 83594 D 262768 CDS NP_950316.1 39938550 2673634 84325..86229 1 NC_005303.2 identified by sequence similarity; putative; FtsH; ATP-dependent Zn protease 86229 hflB 2673634 hflB Onion yellows phytoplasma OY-M ATP-dependent Zn protease NP_950316.1 84325 D 262768 CDS NP_950317.1 39938551 2673373 86315..86587 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 86587 2673373 PAM_065 Onion yellows phytoplasma OY-M hypothetical protein NP_950317.1 86315 D 262768 CDS NP_950318.1 39938552 2673374 86592..87452 1 NC_005303.2 identified by Glimmer2; hypothetical protein 87452 2673374 PAM_066 Onion yellows phytoplasma OY-M hypothetical protein NP_950318.1 86592 D 262768 CDS NP_950319.1 39938553 2673375 87922..88545 1 NC_005303.2 identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum; hypothetical protein 88545 2673375 PAM_067 Onion yellows phytoplasma OY-M hypothetical protein NP_950319.1 87922 D 262768 CDS NP_950320.1 39938554 2672972 88612..89337 1 NC_005303.2 identified by Glimmer2; hypothetical protein 89337 2672972 PAM_068 Onion yellows phytoplasma OY-M hypothetical protein NP_950320.1 88612 D 262768 CDS NP_950321.1 39938555 2672973 89402..90103 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 90103 2672973 PAM_069 Onion yellows phytoplasma OY-M hypothetical protein NP_950321.1 89402 D 262768 CDS NP_950322.1 39938556 2672974 90298..90870 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 90870 2672974 PAM_070 Onion yellows phytoplasma OY-M hypothetical protein NP_950322.1 90298 D 262768 CDS NP_950323.1 39938557 2672975 91415..92062 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 92062 2672975 PAM_071 Onion yellows phytoplasma OY-M hypothetical protein NP_950323.1 91415 D 262768 CDS NP_950324.1 39938558 2673137 92123..92512 1 NC_005303.2 possible pseudogene of thymidylate kinase; identified by sequence similarity; putative; hypothetical protein 92512 2673137 PAM_072 Onion yellows phytoplasma OY-M hypothetical protein NP_950324.1 92123 D 262768 CDS NP_950325.1 39938559 2673138 92749..93516 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 93516 2673138 PAM_073 Onion yellows phytoplasma OY-M hypothetical protein NP_950325.1 92749 D 262768 CDS NP_950326.1 39938560 2672905 93535..95034 1 NC_005303.2 identified by sequence similarity; putative; replicative DNA helicase 95034 dnaB 2672905 dnaB Onion yellows phytoplasma OY-M replicative DNA helicase NP_950326.1 93535 D 262768 CDS NP_950327.1 39938561 2673139 95046..95924 1 NC_005303.2 possible pseudogene of DNA primase (DnaG); identified by sequence similarity; hypothetical protein 95924 2673139 PAM_075 Onion yellows phytoplasma OY-M hypothetical protein NP_950327.1 95046 D 262768 CDS NP_950328.1 39938562 2673140 99183..100070 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 100070 2673140 PAM_076 Onion yellows phytoplasma OY-M hypothetical protein NP_950328.1 99183 D 262768 CDS NP_950329.1 39938563 2673101 100067..101188 1 NC_005303.2 identified by sequence similarity; putative; ABC-type amino acid transport system, permease 101188 artM 2673101 artM Onion yellows phytoplasma OY-M ABC-type amino acid transport system, permease NP_950329.1 100067 D 262768 CDS NP_950330.1 39938564 3126630 101697..103502 1 NC_005303.2 identified by sequence similarity; putative; ABC-type amino acid transport system, permease 103502 artM 3126630 artM Onion yellows phytoplasma OY-M ABC-type amino acid transport system, permease NP_950330.1 101697 D 262768 CDS NP_950331.1 39938565 2673453 103752..104231 1 NC_005303.2 identified by sequence similarity; putative; ABC-type polar amino acid transport system, ATPase component 104231 glnQ 2673453 glnQ Onion yellows phytoplasma OY-M ABC-type polar amino acid transport system, ATPase component NP_950331.1 103752 D 262768 CDS NP_950332.1 39938566 2673141 104409..104654 1 NC_005303.2 possible pseudogene of transposase (Tra5); identified by sequence similarity; hypothetical protein 104654 2673141 PAM_080 Onion yellows phytoplasma OY-M hypothetical protein NP_950332.1 104409 D 262768 CDS NP_950333.1 39938567 2673666 105231..105491 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S20 105491 rpsT 2673666 rpsT Onion yellows phytoplasma OY-M ribosomal protein S20 NP_950333.1 105231 D 262768 CDS NP_950334.1 39938568 2673187 complement(105664..105870) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 105870 2673187 PAM_082 Onion yellows phytoplasma OY-M hypothetical protein NP_950334.1 105664 R 262768 CDS NP_950335.1 39938569 2673419 106430..107704 1 NC_005303.2 identified by sequence similarity; putative; seryl-tRNA synthetase 107704 serS 2673419 serS Onion yellows phytoplasma OY-M seryl-tRNA synthetase NP_950335.1 106430 D 262768 CDS NP_950336.1 39938570 2673188 107898..108221 1 NC_005303.2 identified by Glimmer2; hypothetical protein 108221 2673188 PAM_084 Onion yellows phytoplasma OY-M hypothetical protein NP_950336.1 107898 D 262768 CDS NP_950337.1 39938571 2673189 108383..109348 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 109348 2673189 PAM_085 Onion yellows phytoplasma OY-M hypothetical protein NP_950337.1 108383 D 262768 CDS NP_950338.3 380343398 2673307 109503..109838 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L21 109838 rplU 2673307 rplU Onion yellows phytoplasma OY-M ribosomal protein L21 NP_950338.3 109503 D 262768 CDS NP_950339.1 39938573 2673190 109844..110179 1 NC_005303.2 identified by sequence similarity; putative; predicted ribosomal protein; hypothetical protein 110179 2673190 PAM_087 Onion yellows phytoplasma OY-M hypothetical protein NP_950339.1 109844 D 262768 CDS NP_950340.1 39938574 2673311 110181..110459 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L27 110459 rpmA 2673311 rpmA Onion yellows phytoplasma OY-M ribosomal protein L27 NP_950340.1 110181 D 262768 CDS NP_950341.1 39938575 2672967 110486..111754 1 NC_005303.2 identified by sequence similarity; putative; predicted GTPase; hypothetical protein 111754 obg 2672967 obg Onion yellows phytoplasma OY-M hypothetical protein NP_950341.1 110486 D 262768 CDS NP_950342.1 39938576 2672939 112097..112297 1 NC_005303.2 identified by sequence similarity; putative; phage-associated protein 112297 gepA 2672939 gepA Onion yellows phytoplasma OY-M phage-associated protein NP_950342.1 112097 D 262768 CDS NP_950343.1 39938577 2673522 complement(113366..114295) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 114295 2673522 PAM_091 Onion yellows phytoplasma OY-M hypothetical protein NP_950343.1 113366 R 262768 CDS NP_950344.1 39938578 2672934 115631..116776 1 NC_005303.2 identified by sequence similarity; putative; ABC-type Mn/Zn transport system, periplasmic Mn/Zn-binding protein 116776 znuA 2672934 znuA Onion yellows phytoplasma OY-M ABC-type Mn/Zn transport system, periplasmic Mn/Zn-binding protein NP_950344.1 115631 D 262768 CDS NP_950345.1 39938579 2673085 116807..117571 1 NC_005303.2 identified by sequence similarity; putative; ABC-type Mn/Zn transport system, ATPase 117571 znuC 2673085 znuC Onion yellows phytoplasma OY-M ABC-type Mn/Zn transport system, ATPase NP_950345.1 116807 D 262768 CDS NP_950346.1 39938580 2673084 117672..119831 1 NC_005303.2 identified by sequence similarity; putative; ABC-type Mn/Zn transport system, permease 119831 znuB 2673084 znuB Onion yellows phytoplasma OY-M ABC-type Mn/Zn transport system, permease NP_950346.1 117672 D 262768 CDS NP_950347.1 39938581 2673080 120521..121441 1 NC_005303.2 identified by Glimmer2; hypothetical protein 121441 2673080 PAM_095 Onion yellows phytoplasma OY-M hypothetical protein NP_950347.1 120521 D 262768 CDS NP_950348.1 39938582 2673022 121578..123077 1 NC_005303.2 identified by sequence similarity; putative; ABC-type transport system, involved in lipoprotein release, ATPase component 123077 phnL 2673022 phnL Onion yellows phytoplasma OY-M ABC-type transport system, involved in lipoprotein release, ATPase component NP_950348.1 121578 D 262768 CDS NP_950349.1 39938583 2673298 123489..124316 1 NC_005303.2 identified by sequence similarity; putative; ABC transporter periplasmic component 124316 nlpA 2673298 nlpA Onion yellows phytoplasma OY-M ABC transporter periplasmic component NP_950349.1 123489 D 262768 CDS NP_950350.1 39938584 2673081 124440..124871 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 124871 2673081 PAM_098 Onion yellows phytoplasma OY-M hypothetical protein NP_950350.1 124440 D 262768 CDS NP_950351.1 39938585 2673082 124840..125193 1 NC_005303.2 identified by Glimmer2; hypothetical protein 125193 2673082 PAM_099 Onion yellows phytoplasma OY-M hypothetical protein NP_950351.1 124840 D 262768 CDS NP_950352.1 39938586 2673447 125336..125773 1 NC_005303.2 identified by sequence similarity; putative; nifU-like protein 125773 iscU 2673447 iscU Onion yellows phytoplasma OY-M nifU-like protein NP_950352.1 125336 D 262768 CDS NP_950353.1 39938587 2673083 complement(125929..126663) 1 NC_005303.2 identified by sequence similarity; putative; predicted HD-superfamily hydrolase; hypothetical protein 126663 2673083 PAM_101 Onion yellows phytoplasma OY-M hypothetical protein NP_950353.1 125929 R 262768 CDS NP_950354.1 39938588 2673198 complement(127074..128312) 1 NC_005303.2 identified by sequence similarity; putative; tRNA nucleotidyltransferase/polyA polymerase 128312 pcnB 2673198 pcnB Onion yellows phytoplasma OY-M tRNA nucleotidyltransferase/polyA polymerase NP_950354.1 127074 R 262768 CDS NP_950355.1 39938589 2672909 complement(128672..129157) 1 NC_005303.2 identified by sequence similarity; putative; cytosine/adenosine deaminase 129157 2672909 PAM_103 Onion yellows phytoplasma OY-M cytosine/adenosine deaminase NP_950355.1 128672 R 262768 CDS NP_950356.1 39938590 2673579 complement(129216..129845) 1 NC_005303.2 identified by sequence similarity; putative; thymidine kinase 129845 tdk 2673579 tdk Onion yellows phytoplasma OY-M thymidine kinase NP_950356.1 129216 R 262768 CDS NP_950357.1 39938591 2672998 complement(129965..130246) 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L31 130246 rpmE 2672998 rpmE Onion yellows phytoplasma OY-M ribosomal protein L31 NP_950357.1 129965 R 262768 CDS NP_950358.1 39938592 2673312 complement(130471..130659) 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L28 130659 rpmB 2673312 rpmB Onion yellows phytoplasma OY-M ribosomal protein L28 NP_950358.1 130471 R 262768 CDS NP_950359.1 39938593 2672910 131206..131559 1 NC_005303.2 identified by Glimmer2; hypothetical protein 131559 2672910 PAM_107 Onion yellows phytoplasma OY-M hypothetical protein NP_950359.1 131206 D 262768 CDS NP_950360.1 39938594 2672911 131721..132260 1 NC_005303.2 identified by Glimmer2; hypothetical protein 132260 2672911 PAM_108 Onion yellows phytoplasma OY-M hypothetical protein NP_950360.1 131721 D 262768 CDS NP_950361.1 39938595 2672912 133602..134309 1 NC_005303.2 identified by Glimmer2; hypothetical protein 134309 2672912 PAM_109 Onion yellows phytoplasma OY-M hypothetical protein NP_950361.1 133602 D 262768 CDS NP_950362.1 39938596 2672913 134511..135191 1 NC_005303.2 identified by Glimmer2; hypothetical protein 135191 2672913 PAM_110 Onion yellows phytoplasma OY-M hypothetical protein NP_950362.1 134511 D 262768 CDS NP_950363.1 39938597 2673366 135268..135834 1 NC_005303.2 identified by Glimmer2; hypothetical protein 135834 2673366 PAM_111 Onion yellows phytoplasma OY-M hypothetical protein NP_950363.1 135268 D 262768 CDS NP_950364.1 39938598 2673367 135841..136182 1 NC_005303.2 identified by Glimmer2; hypothetical protein 136182 2673367 PAM_112 Onion yellows phytoplasma OY-M hypothetical protein NP_950364.1 135841 D 262768 CDS NP_950365.1 39938599 2673368 136537..136968 1 NC_005303.2 identified by Glimmer2; hypothetical protein 136968 2673368 PAM_113 Onion yellows phytoplasma OY-M hypothetical protein NP_950365.1 136537 D 262768 CDS NP_950366.1 39938600 2673369 complement(137018..137326) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 137326 2673369 PAM_114 Onion yellows phytoplasma OY-M hypothetical protein NP_950366.1 137018 R 262768 CDS NP_950367.1 39938601 2673370 137373..138002 1 NC_005303.2 identified by Glimmer2; hypothetical protein 138002 2673370 PAM_115 Onion yellows phytoplasma OY-M hypothetical protein NP_950367.1 137373 D 262768 CDS NP_950368.1 39938602 2673371 138038..138400 1 NC_005303.2 identified by Glimmer2; hypothetical protein 138400 2673371 PAM_116 Onion yellows phytoplasma OY-M hypothetical protein NP_950368.1 138038 D 262768 CDS NP_950369.1 39938603 2673332 138877..140088 1 NC_005303.2 identified by sequence similarity; putative; FtsH; ATP-dependent Zn protease 140088 hflB 2673332 hflB Onion yellows phytoplasma OY-M ATP-dependent Zn protease NP_950369.1 138877 D 262768 CDS NP_950370.1 39938604 2673007 140090..140833 1 NC_005303.2 identified by Glimmer2; hypothetical protein 140833 2673007 PAM_118 Onion yellows phytoplasma OY-M hypothetical protein NP_950370.1 140090 D 262768 CDS NP_950371.1 39938605 2673008 141035..141751 1 NC_005303.2 identified by Glimmer2; hypothetical protein 141751 2673008 PAM_119 Onion yellows phytoplasma OY-M hypothetical protein NP_950371.1 141035 D 262768 CDS NP_950372.1 39938606 2673055 142019..142288 1 NC_005303.2 identified by sequence similarity; putative; HSP10; chaperonin GroES 142288 groES 2673055 groES Onion yellows phytoplasma OY-M chaperonin GroES NP_950372.1 142019 D 262768 CDS NP_950373.1 39938607 2673237 142480..144090 1 NC_005303.2 identified by sequence similarity; putative; HSP60; chaperonin GroEL 144090 groEL 2673237 groEL Onion yellows phytoplasma OY-M chaperonin GroEL NP_950373.1 142480 D 262768 CDS NP_950374.1 39938608 2673354 144248..144949 1 NC_005303.2 identified by sequence similarity; immunodominant membrane protein; antigenic membrane protein 144949 amp 2673354 amp Onion yellows phytoplasma OY-M antigenic membrane protein NP_950374.1 144248 D 262768 CDS NP_950375.1 39938609 2673009 145355..146122 1 NC_005303.2 identified by Glimmer2; hypothetical protein 146122 2673009 PAM_123 Onion yellows phytoplasma OY-M hypothetical protein NP_950375.1 145355 D 262768 CDS NP_950376.1 39938610 2673527 146315..147289 1 NC_005303.2 identified by sequence similarity; putative; NAD synthase 147289 nadE 2673527 nadE Onion yellows phytoplasma OY-M NAD synthase NP_950376.1 146315 D 262768 CDS NP_950377.1 39938611 2673390 147401..148537 1 NC_005303.2 identified by sequence similarity; putative; tRNA(5-methylaminomethyl-2-thiouridylate) 148537 trmU 2673390 trmU Onion yellows phytoplasma OY-M tRNA(5-methylaminomethyl-2-thiouridylate) NP_950377.1 147401 D 262768 CDS NP_950378.1 39938612 2673320 148452..150842 1 NC_005303.2 identified by sequence similarity; putative; guanosine polyphosphate pyrophosphohydrolase/synthetase 150842 spoT 2673320 spoT Onion yellows phytoplasma OY-M guanosine polyphosphate pyrophosphohydrolase/synthetase NP_950378.1 148452 D 262768 CDS NP_950379.1 39938613 2673629 151153..152421 1 NC_005303.2 identified by sequence similarity; putative; histidyl-tRNA synthetase 152421 hisS 2673629 hisS Onion yellows phytoplasma OY-M histidyl-tRNA synthetase NP_950379.1 151153 D 262768 CDS NP_950380.1 39938614 2673490 152425..154185 1 NC_005303.2 identified by sequence similarity; putative; aspartyl-tRNA synthetase 154185 aspS 2673490 aspS Onion yellows phytoplasma OY-M aspartyl-tRNA synthetase NP_950380.1 152425 D 262768 CDS NP_950381.1 39938615 2673156 154195..155505 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 155505 mesJ 2673156 mesJ Onion yellows phytoplasma OY-M hypothetical protein NP_950381.1 154195 D 262768 CDS NP_950382.1 39938616 2673333 155627..157651 1 NC_005303.2 identified by sequence similarity; putative; FtsH; ATP-dependent Zn protease 157651 hflB 2673333 hflB Onion yellows phytoplasma OY-M ATP-dependent Zn protease NP_950382.1 155627 D 262768 CDS NP_950383.1 39938617 2673406 157887..158798 1 NC_005303.2 identified by sequence similarity; putative; pseudouridylate synthases 158798 rluA 2673406 rluA Onion yellows phytoplasma OY-M pseudouridylate synthases NP_950383.1 157887 D 262768 CDS NP_950384.1 39938618 2673426 159000..159611 1 NC_005303.2 identified by sequence similarity; putative; ABC-type transport system ATPase 159611 abc 2673426 abc Onion yellows phytoplasma OY-M ABC-type transport system ATPase NP_950384.1 159000 D 262768 CDS NP_950385.1 39938619 2673299 159694..160737 1 NC_005303.2 identified by sequence similarity; putative; ABC transporter periplasmic component 160737 nlpA 2673299 nlpA Onion yellows phytoplasma OY-M ABC transporter periplasmic component NP_950385.1 159694 D 262768 CDS NP_950386.1 39938620 2673010 160750..161451 1 NC_005303.2 identified by sequence similarity; putative; ABC transporter permease 161451 2673010 PAM_134 Onion yellows phytoplasma OY-M ABC transporter permease NP_950386.1 160750 D 262768 CDS NP_950387.1 39938621 2673120 161563..161895 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 161895 2673120 PAM_135 Onion yellows phytoplasma OY-M hypothetical protein NP_950387.1 161563 D 262768 CDS NP_950388.1 39938622 2673661 161971..162195 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S15P/S13E 162195 rpsO 2673661 rpsO Onion yellows phytoplasma OY-M ribosomal protein S15P/S13E NP_950388.1 161971 D 262768 CDS NP_950389.1 39938623 2673121 162349..162891 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 162891 2673121 PAM_137 Onion yellows phytoplasma OY-M hypothetical protein NP_950389.1 162349 D 262768 CDS NP_950390.1 39938624 2673249 163245..163703 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L13 163703 rplM 2673249 rplM Onion yellows phytoplasma OY-M ribosomal protein L13 NP_950390.1 163245 D 262768 CDS NP_950391.1 39938625 2673655 163708..164100 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S9 164100 rpsI 2673655 rpsI Onion yellows phytoplasma OY-M ribosomal protein S9 NP_950391.1 163708 D 262768 CDS NP_950392.1 39938626 2673455 164200..165549 1 NC_005303.2 identified by sequence similarity; putative; glutamyl- and glutaminyl-tRNA synthetase 165549 glnS 2673455 glnS Onion yellows phytoplasma OY-M glutamyl- and glutaminyl-tRNA synthetase NP_950392.1 164200 D 262768 CDS NP_950393.1 39938627 2673652 165715..167031 1 NC_005303.2 identified by sequence similarity; putative; cysteinyl-tRNA synthetase 167031 cysS 2673652 cysS Onion yellows phytoplasma OY-M cysteinyl-tRNA synthetase NP_950393.1 165715 D 262768 CDS NP_950394.1 39938628 2673250 167203..168843 1 NC_005303.2 identified by sequence similarity; putative; uridine kinase 168843 udk 2673250 udk Onion yellows phytoplasma OY-M uridine kinase NP_950394.1 167203 D 262768 CDS NP_950395.1 39938629 2673162 169118..170422 1 NC_005303.2 identified by sequence similarity; putative; thiamine biosynthesis protein 170422 thiI 2673162 thiI Onion yellows phytoplasma OY-M thiamine biosynthesis protein NP_950395.1 169118 D 262768 CDS NP_950396.1 39938630 2673321 170667..171371 1 NC_005303.2 identified by sequence similarity; putative; rRNA methylase 171371 spoU 2673321 spoU Onion yellows phytoplasma OY-M rRNA methylase NP_950396.1 170667 D 262768 CDS NP_950397.1 39938631 2673109 171465..172019 1 NC_005303.2 identified by sequence similarity; putative; inorganic pyrophosphatase 172019 ppa 2673109 ppa Onion yellows phytoplasma OY-M inorganic pyrophosphatase NP_950397.1 171465 D 262768 CDS NP_950398.1 39938632 2673317 172267..172725 1 NC_005303.2 identified by sequence similarity; putative; tmRNA-binding protein 172725 smpB 2673317 smpB Onion yellows phytoplasma OY-M tmRNA-binding protein NP_950398.1 172267 D 262768 CDS NP_950399.1 39938633 2673122 172933..174789 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 174789 2673122 PAM_147 Onion yellows phytoplasma OY-M hypothetical protein NP_950399.1 172933 D 262768 CDS NP_950400.1 39938634 2673672 175032..176105 1 NC_005303.2 identified by sequence similarity; putative; transcription terminator 176105 nusA 2673672 nusA Onion yellows phytoplasma OY-M transcription terminator NP_950400.1 175032 D 262768 CDS NP_950401.1 39938635 2673123 176111..176368 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 176368 2673123 PAM_149 Onion yellows phytoplasma OY-M hypothetical protein NP_950401.1 176111 D 262768 CDS NP_950402.1 39938636 2673554 176528..178387 1 NC_005303.2 identified by sequence similarity; putative; translation initiation factor 2 178387 infB 2673554 infB Onion yellows phytoplasma OY-M translation initiation factor 2 NP_950402.1 176528 D 262768 CDS NP_950403.1 39938637 2673404 178391..178732 1 NC_005303.2 identified by sequence similarity; putative; ribosome-binding factor A 178732 rbfA 2673404 rbfA Onion yellows phytoplasma OY-M ribosome-binding factor A NP_950403.1 178391 D 262768 CDS NP_950404.1 39938638 2673399 179034..179600 1 NC_005303.2 identified by sequence similarity; putative; peptidyl-tRNA hydrolase 179600 pth 2673399 pth Onion yellows phytoplasma OY-M peptidyl-tRNA hydrolase NP_950404.1 179034 D 262768 CDS NP_950405.1 39938639 2673124 complement(179708..181000) 1 NC_005303.2 identified by sequence similarity; putative; similar to hemolysin of Clostridium perfringens; hemolysin 181000 2673124 PAM_153 Onion yellows phytoplasma OY-M hemolysin NP_950405.1 179708 R 262768 CDS NP_950406.1 39938640 2673112 complement(181476..183935) 1 NC_005303.2 identified by sequence similarity; putative; primosomal protein N' 183935 priA 2673112 priA Onion yellows phytoplasma OY-M primosomal protein N' NP_950406.1 181476 R 262768 CDS NP_950407.1 39938641 2673125 complement(184282..185001) 1 NC_005303.2 possible pseudogene of ATP-dependent Zn proteaseHflB (FtsH); identified by sequence similarity; hypothetical protein 185001 2673125 PAM_155 Onion yellows phytoplasma OY-M hypothetical protein NP_950407.1 184282 R 262768 CDS NP_950408.1 39938642 2673091 complement(186032..186349) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 186349 2673091 PAM_156 Onion yellows phytoplasma OY-M hypothetical protein NP_950408.1 186032 R 262768 CDS NP_950409.1 39938643 2673092 complement(187236..188186) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 188186 2673092 PAM_157 Onion yellows phytoplasma OY-M hypothetical protein NP_950409.1 187236 R 262768 CDS NP_950410.1 39938644 2673093 188497..189192 1 NC_005303.2 identified by sequence similarity; putative; hemolysin III 189192 2673093 PAM_158 Onion yellows phytoplasma OY-M hemolysin III NP_950410.1 188497 D 262768 CDS NP_950411.1 39938645 2673352 189434..190666 1 NC_005303.2 identified by sequence similarity; putative; acetate kinase 190666 ackA 2673352 ackA Onion yellows phytoplasma OY-M acetate kinase NP_950411.1 189434 D 262768 CDS NP_950412.1 39938646 2673094 192132..192719 1 NC_005303.2 identified by Glimmer2; hypothetical protein 192719 2673094 PAM_160 Onion yellows phytoplasma OY-M hypothetical protein NP_950412.1 192132 D 262768 CDS NP_950413.1 39938647 2673095 complement(192871..193596) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 193596 2673095 PAM_161 Onion yellows phytoplasma OY-M hypothetical protein NP_950413.1 192871 R 262768 CDS NP_950414.1 39938648 2673637 193875..194648 1 NC_005303.2 identified by Glimmer2; hypothetical protein 194648 2673637 PAM_162 Onion yellows phytoplasma OY-M hypothetical protein NP_950414.1 193875 D 262768 CDS NP_950415.1 39938649 2673166 194730..195371 1 NC_005303.2 identified by sequence similarity; putative; uracil DNA glycosylase 195371 ung 2673166 ung Onion yellows phytoplasma OY-M uracil DNA glycosylase NP_950415.1 194730 D 262768 CDS NP_950416.1 39938650 2673491 195555..196007 1 NC_005303.2 identified by sequence similarity; putative; dUTPase 196007 dut 2673491 dut Onion yellows phytoplasma OY-M dUTPase NP_950416.1 195555 D 262768 CDS NP_950417.1 39938651 2673041 196610..197425 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S2 197425 rpsB 2673041 rpsB Onion yellows phytoplasma OY-M ribosomal protein S2 NP_950417.1 196610 D 262768 CDS NP_950418.1 39938652 2673158 197515..198351 1 NC_005303.2 identified by sequence similarity; putative; translation elongation factor Ts 198351 tsf 2673158 tsf Onion yellows phytoplasma OY-M translation elongation factor Ts NP_950418.1 197515 D 262768 CDS NP_950419.1 39938653 2673402 198441..199166 1 NC_005303.2 identified by sequence similarity; putative; uridylate kinase 199166 pyrH 2673402 pyrH Onion yellows phytoplasma OY-M uridylate kinase NP_950419.1 198441 D 262768 CDS NP_950420.1 39938654 2673128 199169..199723 1 NC_005303.2 identified by sequence similarity; putative; ribosome recycling factor 199723 frr 2673128 frr Onion yellows phytoplasma OY-M ribosome recycling factor NP_950420.1 199169 D 262768 CDS NP_950421.1 39938655 2673456 199795..200712 1 NC_005303.2 identified by sequence similarity; putative; CDP-diglyceride synthetase 200712 cdsA 2673456 cdsA Onion yellows phytoplasma OY-M CDP-diglyceride synthetase NP_950421.1 199795 D 262768 CDS NP_950422.1 39938656 2673461 200974..201798 1 NC_005303.2 identified by sequence similarity; putative; triosephosphate isomerase 201798 tpiA 2673461 tpiA Onion yellows phytoplasma OY-M triosephosphate isomerase NP_950422.1 200974 D 262768 CDS NP_950423.1 39938657 2673355 201977..202774 1 NC_005303.2 identified by sequence similarity; putative; predicted hydrolase of the HAD superfamily; hypothetical protein 202774 cof 2673355 cof Onion yellows phytoplasma OY-M hypothetical protein NP_950423.1 201977 D 262768 CDS NP_950424.1 39938658 2673143 203036..203902 1 NC_005303.2 identified by sequence similarity; putative; fructose/tagatose bisphosphate aldolase 203902 fba 2673143 fba Onion yellows phytoplasma OY-M fructose/tagatose bisphosphate aldolase NP_950424.1 203036 D 262768 CDS NP_950425.1 39938659 2673638 204009..204341 1 NC_005303.2 identified by Glimmer2; hypothetical protein 204341 2673638 PAM_173 Onion yellows phytoplasma OY-M hypothetical protein NP_950425.1 204009 D 262768 CDS NP_950426.1 39938660 2673203 204612..205808 1 NC_005303.2 identified by sequence similarity; putative; 3-phosphoglycerate kinase 205808 pgk 2673203 pgk Onion yellows phytoplasma OY-M 3-phosphoglycerate kinase NP_950426.1 204612 D 262768 CDS NP_950427.1 39938661 2673424 205969..206976 1 NC_005303.2 identified by sequence similarity; putative; glyceraldehyde-3-phosphate dehydrogenase 206976 gapA 2673424 gapA Onion yellows phytoplasma OY-M glyceraldehyde-3-phosphate dehydrogenase NP_950427.1 205969 D 262768 CDS NP_950428.1 39938662 2673639 207358..208038 1 NC_005303.2 identified by Glimmer2; hypothetical protein 208038 2673639 PAM_176 Onion yellows phytoplasma OY-M hypothetical protein NP_950428.1 207358 D 262768 CDS NP_950429.1 39938663 2673640 208663..209136 1 NC_005303.2 identified by Glimmer2; hypothetical protein 209136 2673640 PAM_177 Onion yellows phytoplasma OY-M hypothetical protein NP_950429.1 208663 D 262768 CDS NP_950430.1 39938664 2673641 209279..210967 1 NC_005303.2 identified by sequence similarity; putative; oligoendopeptidase F 210967 2673641 PAM_178 Onion yellows phytoplasma OY-M oligoendopeptidase F NP_950430.1 209279 D 262768 CDS NP_950431.1 39938665 2673587 211167..211982 1 NC_005303.2 identified by sequence similarity; putative; ABC-type cobalt transport system, ATPase 211982 cbiO 2673587 cbiO Onion yellows phytoplasma OY-M ABC-type cobalt transport system, ATPase NP_950431.1 211167 D 262768 CDS NP_950432.1 39938666 2673588 212828..213877 1 NC_005303.2 identified by sequence similarity; putative; ABC-type cobalt transport system, permease 213877 cbiQ 2673588 cbiQ Onion yellows phytoplasma OY-M ABC-type cobalt transport system, permease NP_950432.1 212828 D 262768 CDS NP_950433.1 39938667 2672952 213971..215221 1 NC_005303.2 identified by sequence similarity; putative; glycine hydroxymethyltransferase 215221 glyA 2672952 glyA Onion yellows phytoplasma OY-M glycine hydroxymethyltransferase NP_950433.1 213971 D 262768 CDS NP_950434.1 39938668 2673240 215698..216618 1 NC_005303.2 identified by sequence similarity; putative; predicted GTPase; hypothetical protein 216618 2673240 PAM_182 Onion yellows phytoplasma OY-M hypothetical protein NP_950434.1 215698 D 262768 CDS NP_950435.1 39938669 2673241 216815..217906 1 NC_005303.2 identified by sequence similarity; putative; predicted GTPase; hypothetical protein 217906 2673241 PAM_183 Onion yellows phytoplasma OY-M hypothetical protein NP_950435.1 216815 D 262768 CDS NP_950436.1 39938670 2673552 218019..220721 1 NC_005303.2 identified by sequence similarity; putative; isoleucyl-tRNA synthetase 220721 ileS 2673552 ileS Onion yellows phytoplasma OY-M isoleucyl-tRNA synthetase NP_950436.1 218019 D 262768 CDS NP_950437.1 39938671 2673242 220738..221556 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 221556 2673242 PAM_185 Onion yellows phytoplasma OY-M hypothetical protein NP_950437.1 220738 D 262768 CDS NP_950438.1 39938672 2673363 221711..224467 1 NC_005303.2 identified by sequence similarity; putative; cation transport ATPase 224467 mgtA 2673363 mgtA Onion yellows phytoplasma OY-M cation transport ATPase NP_950438.1 221711 D 262768 CDS NP_950439.1 39938673 2673243 complement(224522..225679) 1 NC_005303.2 identified by sequence similarity; putative; Zn-dependent carboxypeptidase 225679 2673243 PAM_187 Onion yellows phytoplasma OY-M Zn-dependent carboxypeptidase NP_950439.1 224522 R 262768 CDS NP_950440.1 39938674 2673244 complement(225774..226019) 1 NC_005303.2 identified by sequence similarity; putative; Zn-dependent carboxypeptidase 226019 2673244 PAM_188 Onion yellows phytoplasma OY-M Zn-dependent carboxypeptidase NP_950440.1 225774 R 262768 CDS NP_950441.1 39938675 2673654 complement(226296..227099) 1 NC_005303.2 identified by sequence similarity; putative; ABC-type dipeptide/oligopeptide system, permease 227099 dppC 2673654 dppC Onion yellows phytoplasma OY-M ABC-type dipeptide/oligopeptide system, permease NP_950441.1 226296 R 262768 CDS NP_950442.1 39938676 2673653 complement(227128..228054) 1 NC_005303.2 identified by sequence similarity; putative; ABC-type dipeptide/oligopeptide transport system, permease component 228054 dppB 2673653 dppB Onion yellows phytoplasma OY-M ABC-type dipeptide/oligopeptide transport system, permease component NP_950442.1 227128 R 262768 CDS NP_950443.1 39938677 2672968 complement(231479..233050) 1 NC_005303.2 identified by sequence similarity; putative; ABC-type dipeptide/oligopeptide transport system, periplasmic component 233050 oppA 2672968 oppA Onion yellows phytoplasma OY-M ABC-type dipeptide/oligopeptide transport system, periplasmic component NP_950443.1 231479 R 262768 CDS NP_950444.1 39938678 2673626 complement(233256..234059) 1 NC_005303.2 identified by sequence similarity; putative; ABC-type dipeptide/oligopeptide transport system, ATPase component 234059 dppD 2673626 dppD Onion yellows phytoplasma OY-M ABC-type dipeptide/oligopeptide transport system, ATPase component NP_950444.1 233256 R 262768 CDS NP_950445.1 39938679 2673555 complement(234071..234652) 1 NC_005303.2 identified by sequence similarity; putative; ATPase components of various ABC-type transport system; hypothetical protein 234652 2673555 PAM_193 Onion yellows phytoplasma OY-M hypothetical protein NP_950445.1 234071 R 262768 CDS NP_950446.1 39938680 2673556 complement(235406..238492) 1 NC_005303.2 identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum; hypothetical protein 238492 2673556 PAM_194 Onion yellows phytoplasma OY-M hypothetical protein NP_950446.1 235406 R 262768 CDS NP_950447.1 39938681 2673557 complement(238797..239279) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 239279 2673557 PAM_195 Onion yellows phytoplasma OY-M hypothetical protein NP_950447.1 238797 R 262768 CDS NP_950448.1 39938682 2673558 complement(239527..240111) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 240111 2673558 PAM_196 Onion yellows phytoplasma OY-M hypothetical protein NP_950448.1 239527 R 262768 CDS NP_950449.1 39938683 2673559 240541..240843 1 NC_005303.2 identified by Glimmer2; hypothetical protein 240843 2673559 PAM_197 Onion yellows phytoplasma OY-M hypothetical protein NP_950449.1 240541 D 262768 CDS NP_950450.1 39938684 2672999 241162..241368 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L32 241368 rpmF 2672999 rpmF Onion yellows phytoplasma OY-M ribosomal protein L32 NP_950450.1 241162 D 262768 CDS NP_950451.1 39938685 2673656 242717..243040 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S10 243040 rpsJ 2673656 rpsJ Onion yellows phytoplasma OY-M ribosomal protein S10 NP_950451.1 242717 D 262768 CDS NP_950452.1 39938686 2672985 243429..243902 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L3 243902 rplC 2672985 rplC Onion yellows phytoplasma OY-M ribosomal protein L3 NP_950452.1 243429 D 262768 CDS NP_950453.1 39938687 2672986 243889..244512 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L4 244512 rplD 2672986 rplD Onion yellows phytoplasma OY-M ribosomal protein L4 NP_950453.1 243889 D 262768 CDS NP_950454.1 39938688 2673309 244512..244802 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L23 244802 rplW 2673309 rplW Onion yellows phytoplasma OY-M ribosomal protein L23 NP_950454.1 244512 D 262768 CDS NP_950455.1 39938689 2672984 244862..245692 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L2 245692 rplB 2672984 rplB Onion yellows phytoplasma OY-M ribosomal protein L2 NP_950455.1 244862 D 262768 CDS NP_950456.1 39938690 2673665 245705..245986 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S19 245986 rpsS 2673665 rpsS Onion yellows phytoplasma OY-M ribosomal protein S19 NP_950456.1 245705 D 262768 CDS NP_950457.1 39938691 2673308 246003..246392 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L22 246392 rplV 2673308 rplV Onion yellows phytoplasma OY-M ribosomal protein L22 NP_950457.1 246003 D 262768 CDS NP_950458.1 39938692 2673042 246376..247134 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S3 247134 rpsC 2673042 rpsC Onion yellows phytoplasma OY-M ribosomal protein S3 NP_950458.1 246376 D 262768 CDS NP_950459.1 39938693 2673302 247112..247534 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L16/L10E 247534 rplP 2673302 rplP Onion yellows phytoplasma OY-M ribosomal protein L16/L10E NP_950459.1 247112 D 262768 CDS NP_950460.1 39938694 2672996 247531..247851 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L29 247851 rpmC 2672996 rpmC Onion yellows phytoplasma OY-M ribosomal protein L29 NP_950460.1 247531 D 262768 CDS NP_950461.1 39938695 2673663 247851..248114 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S17 248114 rpsQ 2673663 rpsQ Onion yellows phytoplasma OY-M ribosomal protein S17 NP_950461.1 247851 D 262768 CDS NP_950462.1 39938696 2673251 248127..248489 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L14 248489 rplN 2673251 rplN Onion yellows phytoplasma OY-M ribosomal protein L14 NP_950462.1 248127 D 262768 CDS NP_950463.1 39938697 2673310 248611..248850 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L24 248850 rplX 2673310 rplX Onion yellows phytoplasma OY-M ribosomal protein L24 NP_950463.1 248611 D 262768 CDS NP_950464.1 39938698 2672987 248866..249411 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L5 249411 rplE 2672987 rplE Onion yellows phytoplasma OY-M ribosomal protein L5 NP_950464.1 248866 D 262768 CDS NP_950465.1 39938699 2673660 249426..249695 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S14 249695 rpsN 2673660 rpsN Onion yellows phytoplasma OY-M ribosomal protein S14 NP_950465.1 249426 D 262768 CDS NP_950466.1 39938700 2673047 249717..250109 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S8 250109 rpsH 2673047 rpsH Onion yellows phytoplasma OY-M ribosomal protein S8 NP_950466.1 249717 D 262768 CDS NP_950467.1 39938701 2672988 250156..250710 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L6 250710 rplF 2672988 rplF Onion yellows phytoplasma OY-M ribosomal protein L6 NP_950467.1 250156 D 262768 CDS NP_950468.1 39938702 2673304 250720..251073 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L18 251073 rplR 2673304 rplR Onion yellows phytoplasma OY-M ribosomal protein L18 NP_950468.1 250720 D 262768 CDS NP_950469.1 39938703 2673044 251088..251603 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S5 251603 rpsE 2673044 rpsE Onion yellows phytoplasma OY-M ribosomal protein S5 NP_950469.1 251088 D 262768 CDS NP_950470.1 39938704 2672997 251600..251797 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L30/L7E 251797 rpmD 2672997 rpmD Onion yellows phytoplasma OY-M ribosomal protein L30/L7E NP_950470.1 251600 D 262768 CDS NP_950471.1 39938705 2673301 251855..252235 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L15 252235 rplO 2673301 rplO Onion yellows phytoplasma OY-M ribosomal protein L15 NP_950471.1 251855 D 262768 CDS NP_950472.1 39938706 2673415 252238..253479 1 NC_005303.2 identified by sequence similarity; putative; preprotein translocase subunit SecY 253479 secY 2673415 secY Onion yellows phytoplasma OY-M preprotein translocase subunit SecY NP_950472.1 252238 D 262768 CDS NP_950473.1 39938707 2673651 253498..254151 1 NC_005303.2 identified by sequence similarity; putative; adenylate kinase 254151 adk 2673651 adk Onion yellows phytoplasma OY-M adenylate kinase NP_950473.1 253498 D 262768 CDS NP_950474.1 39938708 2673153 254148..254891 1 NC_005303.2 identified by sequence similarity; putative; methionine aminopeptidase 254891 map 2673153 map Onion yellows phytoplasma OY-M methionine aminopeptidase NP_950474.1 254148 D 262768 CDS NP_950475.1 39938709 2673553 254967..255203 1 NC_005303.2 identified by sequence similarity; putative; translation initiation factor IF-1 255203 infA 2673553 infA Onion yellows phytoplasma OY-M translation initiation factor IF-1 NP_950475.1 254967 D 262768 CDS NP_950476.1 39938710 2673004 255216..255332 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L36 255332 rpmJ 2673004 rpmJ Onion yellows phytoplasma OY-M ribosomal protein L36 NP_950476.1 255216 D 262768 CDS NP_950477.1 39938711 2673659 255345..255710 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S13 255710 rpsM 2673659 rpsM Onion yellows phytoplasma OY-M ribosomal protein S13 NP_950477.1 255345 D 262768 CDS NP_950478.1 39938712 2673657 255752..256138 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S11 256138 rpsK 2673657 rpsK Onion yellows phytoplasma OY-M ribosomal protein S11 NP_950478.1 255752 D 262768 CDS NP_950479.1 39938713 2673005 256169..256912 1 NC_005303.2 identified by sequence similarity; putative; DNA-directed RNA polymerase alpha subunit 256912 rpoA 2673005 rpoA Onion yellows phytoplasma OY-M DNA-directed RNA polymerase alpha subunit NP_950479.1 256169 D 262768 CDS NP_950480.1 39938714 2673303 257206..257562 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L17 257562 rplQ 2673303 rplQ Onion yellows phytoplasma OY-M ribosomal protein L17 NP_950480.1 257206 D 262768 CDS NP_950481.1 39938715 2673393 257734..258465 1 NC_005303.2 identified by sequence similarity; putative; pseudouridylate synthase 258465 truA 2673393 truA Onion yellows phytoplasma OY-M pseudouridylate synthase NP_950481.1 257734 D 262768 CDS NP_950482.1 39938716 2673225 258513..259136 1 NC_005303.2 identified by sequence similarity; putative; thymidylate kinase 259136 tmk 2673225 tmk Onion yellows phytoplasma OY-M thymidylate kinase NP_950482.1 258513 D 262768 CDS NP_950483.1 39938717 2673327 259133..260122 1 NC_005303.2 identified by sequence similarity; putative; DNA polymerase III, delta prime subunit 260122 holB 2673327 holB Onion yellows phytoplasma OY-M DNA polymerase III, delta prime subunit NP_950483.1 259133 D 262768 CDS NP_950484.1 39938718 2673560 260206..261063 1 NC_005303.2 identified by sequence similarity; putative; predicted methyltransferase; hypothetical protein 261063 2673560 PAM_232 Onion yellows phytoplasma OY-M hypothetical protein NP_950484.1 260206 D 262768 CDS NP_950485.1 39938719 2673362 261149..262711 1 NC_005303.2 identified by sequence similarity; putative; methionyl-tRNA synthetase 262711 metG 2673362 metG Onion yellows phytoplasma OY-M methionyl-tRNA synthetase NP_950485.1 261149 D 262768 CDS NP_950486.1 39938720 2673667 263120..263794 1 NC_005303.2 possible pseudogene of ATP-dependent Zn proteaseHflB (FtsH); identified by sequence similarity; hypothetical protein 263794 2673667 PAM_234 Onion yellows phytoplasma OY-M hypothetical protein NP_950486.1 263120 D 262768 CDS NP_950487.1 39938721 2673668 263801..264769 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 264769 2673668 PAM_235 Onion yellows phytoplasma OY-M hypothetical protein NP_950487.1 263801 D 262768 CDS NP_950488.1 39938722 2673395 265227..265478 1 NC_005303.2 identified by sequence similarity; putative; thioredoxin 265478 trxA 2673395 trxA Onion yellows phytoplasma OY-M thioredoxin NP_950488.1 265227 D 262768 CDS NP_950489.1 39938723 2673394 265512..266363 1 NC_005303.2 identified by sequence similarity; putative; pseudouridine synthase 266363 truB 2673394 truB Onion yellows phytoplasma OY-M pseudouridine synthase NP_950489.1 265512 D 262768 CDS NP_950490.1 39938724 2673412 266482..267219 1 NC_005303.2 identified by sequence similarity; putative; 16S rRNA pseudouridylate synthase 267219 rsuA 2673412 rsuA Onion yellows phytoplasma OY-M 16S rRNA pseudouridylate synthase NP_950490.1 266482 D 262768 CDS NP_950491.1 39938725 2673300 267259..267930 1 NC_005303.2 identified by sequence similarity; putative; cytidylate kinase 267930 cmk 2673300 cmk Onion yellows phytoplasma OY-M cytidylate kinase NP_950491.1 267259 D 262768 CDS NP_950492.1 39938726 2673669 267931..269367 1 NC_005303.2 identified by sequence similarity; putative; predicted GTPase; hypothetical protein 269367 2673669 PAM_240 Onion yellows phytoplasma OY-M hypothetical protein NP_950492.1 267931 D 262768 CDS NP_950493.1 39938727 2673235 269418..270569 1 NC_005303.2 identified by sequence similarity; putative; glycerol 3-phosphate dehydrogenase 270569 gpsA 2673235 gpsA Onion yellows phytoplasma OY-M glycerol 3-phosphate dehydrogenase NP_950493.1 269418 D 262768 CDS NP_950494.1 39938728 2673676 270744..271028 1 NC_005303.2 identified by sequence similarity; putative; bacterial nucleoid DNA-binding protein 271028 himA 2673676 himA Onion yellows phytoplasma OY-M bacterial nucleoid DNA-binding protein NP_950494.1 270744 D 262768 CDS NP_950495.1 39938729 2673670 271525..272415 1 NC_005303.2 identified by Glimmer2; hypothetical protein 272415 2673670 PAM_243 Onion yellows phytoplasma OY-M hypothetical protein NP_950495.1 271525 D 262768 CDS NP_950496.1 39938730 2673000 272498..272647 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L33 272647 rpmG 2673000 rpmG Onion yellows phytoplasma OY-M ribosomal protein L33 NP_950496.1 272498 D 262768 CDS NP_950497.1 39938731 2673200 272915..274171 1 NC_005303.2 identified by sequence similarity; putative; xaa-Pro aminopeptidase 274171 pepP 2673200 pepP Onion yellows phytoplasma OY-M xaa-Pro aminopeptidase NP_950497.1 272915 D 262768 CDS NP_950498.1 39938732 2673114 274923..276347 1 NC_005303.2 identified by sequence similarity; putative; prolyl-tRNA synthetase 276347 proS 2673114 proS Onion yellows phytoplasma OY-M prolyl-tRNA synthetase NP_950498.1 274923 D 262768 CDS NP_950499.1 39938733 2673002 276574..276708 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L34 276708 rpmH 2673002 rpmH Onion yellows phytoplasma OY-M ribosomal protein L34 NP_950499.1 276574 D 262768 CDS NP_950500.1 39938734 2673409 276812..277237 1 NC_005303.2 identified by sequence similarity; putative; ribonuclease P 277237 rnpA 2673409 rnpA Onion yellows phytoplasma OY-M ribonuclease P NP_950500.1 276812 D 262768 CDS NP_950501.1 39938735 2672932 277256..278833 1 NC_005303.2 identified by sequence similarity; putative; preprotein translocase subunit YidC 278833 yidC 2672932 yidC Onion yellows phytoplasma OY-M preprotein translocase subunit YidC NP_950501.1 277256 D 262768 CDS NP_950503.1 39938737 2673026 284635..286782 1 NC_005303.2 identified by sequence similarity; putative; polyribonucleotide nucleotidyltransferase 286782 pnp 2673026 pnp Onion yellows phytoplasma OY-M polyribonucleotide nucleotidyltransferase NP_950503.1 284635 D 262768 CDS NP_950504.1 39938738 2673364 286852..290022 1 NC_005303.2 identified by sequence similarity; putative; cation transport ATPase 290022 mgtA 2673364 mgtA Onion yellows phytoplasma OY-M cation transport ATPase NP_950504.1 286852 D 262768 CDS NP_950505.1 39938739 2673001 290245..290430 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L33 290430 rpmG 2673001 rpmG Onion yellows phytoplasma OY-M ribosomal protein L33 NP_950505.1 290245 D 262768 CDS NP_950506.1 39938740 2673414 290447..290857 1 NC_005303.2 identified by sequence similarity; putative; preprotein translocase subunit SecE 290857 secE 2673414 secE Onion yellows phytoplasma OY-M preprotein translocase subunit SecE NP_950506.1 290447 D 262768 CDS NP_950507.1 39938741 2673674 290859..291473 1 NC_005303.2 identified by sequence similarity; putative; transcription antiterminator 291473 nusG 2673674 nusG Onion yellows phytoplasma OY-M transcription antiterminator NP_950507.1 290859 D 262768 CDS NP_950508.1 39938742 2673247 291671..292096 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L11 292096 rplK 2673247 rplK Onion yellows phytoplasma OY-M ribosomal protein L11 NP_950508.1 291671 D 262768 CDS NP_950509.3 380343399 2672983 292157..292882 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L1 292882 rplA 2672983 rplA Onion yellows phytoplasma OY-M ribosomal protein L1 NP_950509.3 292157 D 262768 CDS NP_950510.1 39938744 2673246 292922..293431 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L10 293431 rplJ 2673246 rplJ Onion yellows phytoplasma OY-M ribosomal protein L10 NP_950510.1 292922 D 262768 CDS NP_950511.1 39938745 2673248 293443..293853 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L7/L12 293853 rplL 2673248 rplL Onion yellows phytoplasma OY-M ribosomal protein L7/L12 NP_950511.1 293443 D 262768 CDS NP_950512.1 39938746 2673006 294025..297846 1 NC_005303.2 identified by sequence similarity; putative; DNA-directed RNA polymerase beta subunit 297846 rpoB 2673006 rpoB Onion yellows phytoplasma OY-M DNA-directed RNA polymerase beta subunit NP_950512.1 294025 D 262768 CDS NP_950513.1 39938747 2673036 297849..301910 1 NC_005303.2 identified by sequence similarity; putative; DNA-directed RNA polymerase beta' subunit 301910 rpoC 2673036 rpoC Onion yellows phytoplasma OY-M DNA-directed RNA polymerase beta' subunit NP_950513.1 297849 D 262768 CDS NP_950514.1 39938748 2673658 301931..302350 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S12 302350 rpsL 2673658 rpsL Onion yellows phytoplasma OY-M ribosomal protein S12 NP_950514.1 301931 D 262768 CDS NP_950515.1 39938749 2673046 302439..302909 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S7 302909 rpsG 2673046 rpsG Onion yellows phytoplasma OY-M ribosomal protein S7 NP_950515.1 302439 D 262768 CDS NP_950516.1 39938750 2673423 302934..305000 1 NC_005303.2 identified by sequence similarity; putative; translation elongation factor EF-G 305000 fusA 2673423 fusA Onion yellows phytoplasma OY-M translation elongation factor EF-G NP_950516.1 302934 D 262768 CDS NP_950517.1 39938751 2673159 305131..306315 1 NC_005303.2 identified by sequence similarity; putative; translation elongation factor EF-Tu 306315 tufB 2673159 tufB Onion yellows phytoplasma OY-M translation elongation factor EF-Tu NP_950517.1 305131 D 262768 CDS NP_950518.1 39938752 2673444 306887..307555 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 307555 2673444 PAM_266 Onion yellows phytoplasma OY-M hypothetical protein NP_950518.1 306887 D 262768 CDS NP_950519.1 39938753 2673191 complement(307603..308241) 1 NC_005303.2 identified by sequence similarity; putative; S-adenosylmethionine-dependent 308241 gidB 2673191 gidB Onion yellows phytoplasma OY-M S-adenosylmethionine-dependent NP_950519.1 307603 R 262768 CDS NP_950520.1 39938754 2672940 complement(308228..310081) 1 NC_005303.2 identified by sequence similarity; putative; glucose inhibited division protein A 310081 gidA 2672940 gidA Onion yellows phytoplasma OY-M glucose inhibited division protein A NP_950520.1 308228 R 262768 CDS NP_950521.1 39938755 2673445 complement(310138..310833) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 310833 2673445 PAM_269 Onion yellows phytoplasma OY-M hypothetical protein NP_950521.1 310138 R 262768 CDS NP_950522.1 39938756 2673337 311826..312911 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 312911 2673337 PAM_270 Onion yellows phytoplasma OY-M hypothetical protein NP_950522.1 311826 D 262768 CDS NP_950523.1 39938757 2673338 313230..313541 1 NC_005303.2 identified by Glimmer2; hypothetical protein 313541 2673338 PAM_271 Onion yellows phytoplasma OY-M hypothetical protein NP_950523.1 313230 D 262768 CDS NP_950524.1 39938758 2673339 314047..315633 1 NC_005303.2 identified by sequence similarity; putative; predicted HD superfamily hydrolase; hypothetical protein 315633 2673339 PAM_272 Onion yellows phytoplasma OY-M hypothetical protein NP_950524.1 314047 D 262768 CDS NP_950525.1 39938759 2673340 315658..316119 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 316119 2673340 PAM_273 Onion yellows phytoplasma OY-M hypothetical protein NP_950525.1 315658 D 262768 CDS NP_950526.1 39938760 2673150 316094..316279 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 316279 2673150 PAM_274 Onion yellows phytoplasma OY-M hypothetical protein NP_950526.1 316094 D 262768 CDS NP_950527.1 39938761 2673103 316651..317526 1 NC_005303.2 identified by sequence similarity; putative; tRNA delta(2)-isopentenylpyrophosphate 317526 miaA 2673103 miaA Onion yellows phytoplasma OY-M tRNA delta(2)-isopentenylpyrophosphate NP_950527.1 316651 D 262768 CDS NP_950528.1 39938762 2673597 317585..318154 1 NC_005303.2 identified by sequence similarity; putative; translation elongation factor EF-P 318154 efp 2673597 efp Onion yellows phytoplasma OY-M translation elongation factor EF-P NP_950528.1 317585 D 262768 CDS NP_950529.1 39938763 2673151 318371..319135 1 NC_005303.2 identified by Glimmer2; hypothetical protein 319135 2673151 PAM_277 Onion yellows phytoplasma OY-M hypothetical protein NP_950529.1 318371 D 262768 CDS NP_950530.1 39938764 2673152 319165..320052 1 NC_005303.2 identified by sequence similarity; putative; predicted GTPase; hypothetical protein 320052 2673152 PAM_278 Onion yellows phytoplasma OY-M hypothetical protein NP_950530.1 319165 D 262768 CDS NP_950531.1 39938765 2673460 320143..322086 1 NC_005303.2 identified by sequence similarity; putative; topoisomerase IA 322086 topA 2673460 topA Onion yellows phytoplasma OY-M topoisomerase IA NP_950531.1 320143 D 262768 CDS NP_950532.1 39938766 2672935 complement(322195..323790) 1 NC_005303.2 identified by sequence similarity; putative; Na+-driven multidrug efflux pump 323790 norM 2672935 norM Onion yellows phytoplasma OY-M Na+-driven multidrug efflux pump NP_950532.1 322195 R 262768 CDS NP_950533.1 39938767 2673201 324839..325837 1 NC_005303.2 identified by sequence similarity; putative; 6-phosphofructokinase 325837 pfkA 2673201 pfkA Onion yellows phytoplasma OY-M 6-phosphofructokinase NP_950533.1 324839 D 262768 CDS NP_950534.1 39938768 2673686 325982..327466 1 NC_005303.2 identified by Glimmer2; hypothetical protein 327466 2673686 PAM_282 Onion yellows phytoplasma OY-M hypothetical protein NP_950534.1 325982 D 262768 CDS NP_950535.1 39938769 2673202 327589..328869 1 NC_005303.2 identified by sequence similarity; putative; glucose-6-phosphate isomerase 328869 pgi 2673202 pgi Onion yellows phytoplasma OY-M glucose-6-phosphate isomerase NP_950535.1 327589 D 262768 CDS NP_950536.1 39938770 2673598 329038..330330 1 NC_005303.2 identified by sequence similarity; putative; enolase 330330 eno 2673598 eno Onion yellows phytoplasma OY-M enolase NP_950536.1 329038 D 262768 CDS NP_950537.1 39938771 2673593 330452..331990 1 NC_005303.2 identified by sequence similarity; putative; phosphoglyceromutase 331990 gpmI 2673593 gpmI Onion yellows phytoplasma OY-M phosphoglyceromutase NP_950537.1 330452 D 262768 CDS NP_950538.1 39938772 2673252 332415..333560 1 NC_005303.2 identified by sequence similarity; putative; malate/citrate symporter 333560 citS 2673252 citS Onion yellows phytoplasma OY-M malate/citrate symporter NP_950538.1 332415 D 262768 CDS NP_950539.1 39938773 2673400 333629..334969 1 NC_005303.2 identified by sequence similarity; putative; pyruvate kinase 334969 pykF 2673400 pykF Onion yellows phytoplasma OY-M pyruvate kinase NP_950539.1 333629 D 262768 CDS NP_950540.1 39938774 2672990 complement(335094..336308) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 336308 2672990 PAM_288 Onion yellows phytoplasma OY-M hypothetical protein NP_950540.1 335094 R 262768 CDS NP_950541.1 39938775 2672955 complement(336401..337345) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 337345 2672955 PAM_289 Onion yellows phytoplasma OY-M hypothetical protein NP_950541.1 336401 R 262768 CDS NP_950542.1 39938776 2673492 337963..339339 1 NC_005303.2 identified by sequence similarity; putative; acetylornithine deacetylase 339339 argE 2673492 argE Onion yellows phytoplasma OY-M acetylornithine deacetylase NP_950542.1 337963 D 262768 CDS NP_950543.1 39938777 2672956 339373..339753 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 339753 2672956 PAM_291 Onion yellows phytoplasma OY-M hypothetical protein NP_950543.1 339373 D 262768 CDS NP_950544.1 39938778 2673071 339884..340327 1 NC_005303.2 possible pseudogene of acetylornithine deacetylase; identified by sequence similarity; acetylornithine deacetylase 340327 argE 2673071 argE Onion yellows phytoplasma OY-M acetylornithine deacetylase NP_950544.1 339884 D 262768 CDS NP_950545.1 39938779 2673584 340372..341238 1 NC_005303.2 identified by sequence similarity; putative; thymidylate synthase 341238 thyA 2673584 thyA Onion yellows phytoplasma OY-M thymidylate synthase NP_950545.1 340372 D 262768 CDS NP_950546.1 39938780 2673636 341235..341726 1 NC_005303.2 identified by sequence similarity; putative; dihydrofolate reductase 341726 folA 2673636 folA Onion yellows phytoplasma OY-M dihydrofolate reductase NP_950546.1 341235 D 262768 CDS NP_950547.1 39938781 2673024 341720..342529 1 NC_005303.2 identified by sequence similarity; putative; 1-acyl-sn-glycerol-3-phosphate acyltransferase 342529 plsC 2673024 plsC Onion yellows phytoplasma OY-M 1-acyl-sn-glycerol-3-phosphate acyltransferase NP_950547.1 341720 D 262768 CDS NP_950548.1 39938782 2672957 342630..343058 1 NC_005303.2 identified by sequence similarity; putative; predicted redox protein; hypothetical protein 343058 2672957 PAM_296 Onion yellows phytoplasma OY-M hypothetical protein NP_950548.1 342630 D 262768 CDS NP_950549.1 39938783 2672958 complement(343147..343494) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 343494 2672958 PAM_297 Onion yellows phytoplasma OY-M hypothetical protein NP_950549.1 343147 R 262768 CDS NP_950550.1 39938784 2672959 complement(343499..343714) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 343714 2672959 PAM_298 Onion yellows phytoplasma OY-M hypothetical protein NP_950550.1 343499 R 262768 CDS NP_950551.1 39938785 2673617 complement(343768..344328) 1 NC_005303.2 identified by sequence similarity; putative; N6-adenine-specific methylase 344328 2673617 PAM_299 Onion yellows phytoplasma OY-M N6-adenine-specific methylase NP_950551.1 343768 R 262768 CDS NP_950552.1 39938786 2673618 complement(344325..344924) 1 NC_005303.2 identified by sequence similarity; putative; predicted HD superfamily hydrolase; hypothetical protein 344924 2673618 PAM_300 Onion yellows phytoplasma OY-M hypothetical protein NP_950552.1 344325 R 262768 CDS NP_950553.1 39938787 2673619 complement(344911..345480) 1 NC_005303.2 identified by sequence similarity; putative; predicted hydrolase of the HAD superfamily; hypothetical protein 345480 2673619 PAM_301 Onion yellows phytoplasma OY-M hypothetical protein NP_950553.1 344911 R 262768 CDS NP_950554.1 39938788 2673236 complement(345470..345982) 1 NC_005303.2 identified by sequence similarity; putative; transcription elongation factor 345982 greA 2673236 greA Onion yellows phytoplasma OY-M transcription elongation factor NP_950554.1 345470 R 262768 CDS NP_950555.1 39938789 2673318 complement(345993..346577) 1 NC_005303.2 identified by sequence similarity; putative; SAM-dependent methyltransferase 346577 smtA 2673318 smtA Onion yellows phytoplasma OY-M SAM-dependent methyltransferase NP_950555.1 345993 R 262768 CDS NP_950556.1 39938790 2673620 complement(346579..347034) 1 NC_005303.2 identified by sequence similarity; putative; Hollyday junction resolvase 347034 2673620 PAM_304 Onion yellows phytoplasma OY-M Hollyday junction resolvase NP_950556.1 346579 R 262768 CDS NP_950557.1 39938791 2673573 complement(347381..349975) 1 NC_005303.2 identified by sequence similarity; putative; alanyl-tRNA synthetase 349975 alaS 2673573 alaS Onion yellows phytoplasma OY-M alanyl-tRNA synthetase NP_950557.1 347381 R 262768 CDS NP_950558.1 39938792 2673428 350438..351805 1 NC_005303.2 identified by sequence similarity; putative; dimethyladenosine transferase 351805 ksgA 2673428 ksgA Onion yellows phytoplasma OY-M dimethyladenosine transferase NP_950558.1 350438 D 262768 CDS NP_950559.1 39938793 2673231 complement(351876..353144) 1 NC_005303.2 identified by sequence similarity; putative; FtsH; ATP-dependent Zn protease 353144 hflB 2673231 hflB Onion yellows phytoplasma OY-M ATP-dependent Zn protease NP_950559.1 351876 R 262768 CDS NP_950560.1 39938794 2673621 complement(353275..353958) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 353958 2673621 PAM_308 Onion yellows phytoplasma OY-M hypothetical protein NP_950560.1 353275 R 262768 CDS NP_950561.1 39938795 2673378 complement(354084..355100) 1 NC_005303.2 identified by sequence similarity; putative; lipoate-protein ligase A 355100 lplA 2673378 lplA Onion yellows phytoplasma OY-M lipoate-protein ligase A NP_950561.1 354084 R 262768 CDS NP_950562.1 39938796 2673622 356125..356589 1 NC_005303.2 identified by Glimmer2; hypothetical protein 356589 2673622 PAM_310 Onion yellows phytoplasma OY-M hypothetical protein NP_950562.1 356125 D 262768 CDS NP_950563.1 39938797 2672941 357507..357839 1 NC_005303.2 identified by Glimmer2; hypothetical protein 357839 2672941 PAM_311 Onion yellows phytoplasma OY-M hypothetical protein NP_950563.1 357507 D 262768 CDS NP_950564.1 39938798 2672942 358034..358504 1 NC_005303.2 identified by Glimmer2; hypothetical protein 358504 2672942 PAM_312 Onion yellows phytoplasma OY-M hypothetical protein NP_950564.1 358034 D 262768 CDS NP_950565.1 39938799 2672943 358467..359141 1 NC_005303.2 identified by Glimmer2; hypothetical protein 359141 2672943 PAM_313 Onion yellows phytoplasma OY-M hypothetical protein NP_950565.1 358467 D 262768 CDS NP_950566.1 39938800 2672944 359173..360414 1 NC_005303.2 identified by sequence similarity; putative; similar to DotG of Legionella pneumophila; hypothetical protein 360414 2672944 PAM_314 Onion yellows phytoplasma OY-M hypothetical protein NP_950566.1 359173 D 262768 CDS NP_950567.1 39938801 2673170 360616..363732 1 NC_005303.2 identified by sequence similarity; putative; ATP-dependent DNA helicase 363732 uvrD 2673170 uvrD Onion yellows phytoplasma OY-M ATP-dependent DNA helicase NP_950567.1 360616 D 262768 CDS NP_950568.1 39938802 2673594 complement(363945..365318) 1 NC_005303.2 identified by sequence similarity; putative; FtsH; ATP-dependent Zn protease 365318 hflB 2673594 hflB Onion yellows phytoplasma OY-M ATP-dependent Zn protease NP_950568.1 363945 R 262768 CDS NP_950569.1 39938803 2673131 complement(365361..365651) 1 NC_005303.2 identified by sequence similarity; putative; bacterial nucleoid DNA-binding protein 365651 himA 2673131 himA Onion yellows phytoplasma OY-M bacterial nucleoid DNA-binding protein NP_950569.1 365361 R 262768 CDS NP_950570.1 39938804 2672945 complement(366112..366591) 1 NC_005303.2 possible pseudogene of site-specific DNA methylase (dam); identified by sequence similarity; hypothetical protein 366591 2672945 PAM_318 Onion yellows phytoplasma OY-M hypothetical protein NP_950570.1 366112 R 262768 CDS NP_950571.1 39938805 2673347 complement(366900..367229) 1 NC_005303.2 identified by sequence similarity; putative; single-stranded DNA-binding protein 367229 ssb 2673347 ssb Onion yellows phytoplasma OY-M single-stranded DNA-binding protein NP_950571.1 366900 R 262768 CDS NP_950572.1 39938806 2673591 complement(367444..368073) 1 NC_005303.2 identified by sequence similarity; putative; DNA-directed RNA polymerase specialized sigma 368073 fliA 2673591 fliA Onion yellows phytoplasma OY-M DNA-directed RNA polymerase specialized sigma NP_950572.1 367444 R 262768 CDS NP_950573.1 39938807 2672914 368215..368709 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 368709 2672914 PAM_321 Onion yellows phytoplasma OY-M hypothetical protein NP_950573.1 368215 D 262768 CDS NP_950574.1 39938808 2672915 368724..369350 1 NC_005303.2 identified by Glimmer2; hypothetical protein 369350 2672915 PAM_322 Onion yellows phytoplasma OY-M hypothetical protein NP_950574.1 368724 D 262768 CDS NP_950575.1 39938809 2673466 369487..370107 1 NC_005303.2 identified by sequence similarity; putative; DNA-directed RNA polymerase specialized sigma 370107 fliA 2673466 fliA Onion yellows phytoplasma OY-M DNA-directed RNA polymerase specialized sigma NP_950575.1 369487 D 262768 CDS NP_950576.1 39938810 2673342 370112..370441 1 NC_005303.2 identified by sequence similarity; putative; single-stranded DNA-binding protein 370441 ssb 2673342 ssb Onion yellows phytoplasma OY-M single-stranded DNA-binding protein NP_950576.1 370112 D 262768 CDS NP_950577.1 39938811 2673468 370495..370785 1 NC_005303.2 identified by sequence similarity; putative; bacterial nucleoid DNA-binding protein 370785 himA 2673468 himA Onion yellows phytoplasma OY-M bacterial nucleoid DNA-binding protein NP_950577.1 370495 D 262768 CDS NP_950578.1 39938812 2673334 370828..372378 1 NC_005303.2 identified by sequence similarity; putative; FtsH; ATP-dependent Zn protease 372378 hflB 2673334 hflB Onion yellows phytoplasma OY-M ATP-dependent Zn protease NP_950578.1 370828 D 262768 CDS NP_950579.1 39938813 2672916 373206..374069 1 NC_005303.2 identified by Glimmer2; hypothetical protein 374069 2672916 PAM_327 Onion yellows phytoplasma OY-M hypothetical protein NP_950579.1 373206 D 262768 CDS NP_950580.1 39938814 2672917 374032..374439 1 NC_005303.2 identified by Glimmer2; hypothetical protein 374439 2672917 PAM_328 Onion yellows phytoplasma OY-M hypothetical protein NP_950580.1 374032 D 262768 CDS NP_950581.1 39938815 2672918 375253..375576 1 NC_005303.2 identified by Glimmer2; hypothetical protein 375576 2672918 PAM_329 Onion yellows phytoplasma OY-M hypothetical protein NP_950581.1 375253 D 262768 CDS NP_950582.1 39938816 2672919 376003..376815 1 NC_005303.2 possible pseudogene of ATP-dependent Zn proteaseHflB (FtsH); identified by sequence similarity; hypothetical protein 376815 2672919 PAM_330 Onion yellows phytoplasma OY-M hypothetical protein NP_950582.1 376003 D 262768 CDS NP_950583.1 39938817 2672991 376958..377524 1 NC_005303.2 identified by Glimmer2; hypothetical protein 377524 2672991 PAM_331 Onion yellows phytoplasma OY-M hypothetical protein NP_950583.1 376958 D 262768 CDS NP_950584.1 39938818 2672992 377580..377939 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 377939 2672992 PAM_332 Onion yellows phytoplasma OY-M hypothetical protein NP_950584.1 377580 D 262768 CDS NP_950585.1 39938819 2672993 378595..379044 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 379044 2672993 PAM_333 Onion yellows phytoplasma OY-M hypothetical protein NP_950585.1 378595 D 262768 CDS NP_950586.1 39938820 2672994 381179..381676 1 NC_005303.2 possible pseudogene of replicative DNA helicase (DnaB); identified by sequence similarity; hypothetical protein 381676 2672994 PAM_334 Onion yellows phytoplasma OY-M hypothetical protein NP_950586.1 381179 D 262768 CDS NP_950587.1 39938821 2672995 381801..382148 1 NC_005303.2 identified by Glimmer2; hypothetical protein 382148 2672995 PAM_335 Onion yellows phytoplasma OY-M hypothetical protein NP_950587.1 381801 D 262768 CDS NP_950588.1 39938822 2672946 382174..382650 1 NC_005303.2 possible pseudogene of DNA primase (DnaG); identified by sequence similarity; hypothetical protein 382650 2672946 PAM_336 Onion yellows phytoplasma OY-M hypothetical protein NP_950588.1 382174 D 262768 CDS NP_950589.1 39938823 2673464 complement(383271..384200) 1 NC_005303.2 identified by sequence similarity; putative; putative transposase 384200 tra5 2673464 tra5 Onion yellows phytoplasma OY-M putative transposase NP_950589.1 383271 R 262768 CDS NP_950590.1 39938824 2672947 complement(384618..384992) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 384992 2672947 PAM_338 Onion yellows phytoplasma OY-M hypothetical protein NP_950590.1 384618 R 262768 CDS NP_950591.1 39938825 2672948 complement(384989..385417) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 385417 2672948 PAM_339 Onion yellows phytoplasma OY-M hypothetical protein NP_950591.1 384989 R 262768 CDS NP_950592.1 39938826 2672949 complement(386376..386744) 1 NC_005303.2 possible pseudogene of DNA primase (DnaG); identified by sequence similarity; hypothetical protein 386744 2672949 PAM_340 Onion yellows phytoplasma OY-M hypothetical protein NP_950592.1 386376 R 262768 CDS NP_950593.1 39938827 2672950 complement(387203..387796) 1 NC_005303.2 possible pseudogene of replicative DNA helicase (DnaB); identified by sequence similarity; hypothetical protein 387796 2672950 PAM_341 Onion yellows phytoplasma OY-M hypothetical protein NP_950593.1 387203 R 262768 CDS NP_950594.1 39938828 2672951 complement(388385..390145) 1 NC_005303.2 identified by sequence similarity; putative; retron-type reverse transcriptase 390145 2672951 PAM_342 Onion yellows phytoplasma OY-M retron-type reverse transcriptase NP_950594.1 388385 R 262768 CDS NP_950595.1 39938829 2673011 complement(390793..391398) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 391398 2673011 PAM_343 Onion yellows phytoplasma OY-M hypothetical protein NP_950595.1 390793 R 262768 CDS NP_950596.1 39938830 2673458 complement(391588..392202) 1 NC_005303.2 identified by sequence similarity; putative; thymidylate kinase 392202 tmk 2673458 tmk Onion yellows phytoplasma OY-M thymidylate kinase NP_950596.1 391588 R 262768 CDS NP_950597.1 39938831 2673012 complement(392276..392905) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 392905 2673012 PAM_345 Onion yellows phytoplasma OY-M hypothetical protein NP_950597.1 392276 R 262768 CDS NP_950598.1 39938832 2673013 complement(393437..394282) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 394282 2673013 PAM_346 Onion yellows phytoplasma OY-M hypothetical protein NP_950598.1 393437 R 262768 CDS NP_950599.1 39938833 2673014 complement(394311..395036) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 395036 2673014 PAM_347 Onion yellows phytoplasma OY-M hypothetical protein NP_950599.1 394311 R 262768 CDS NP_950600.1 39938834 2673315 complement(395103..395750) 1 NC_005303.2 identified by sequence similarity; putative; chromosome segregation ATPase 395750 smc 2673315 smc Onion yellows phytoplasma OY-M chromosome segregation ATPase NP_950600.1 395103 R 262768 CDS NP_950601.1 39938835 2673015 complement(396223..397095) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 397095 2673015 PAM_349 Onion yellows phytoplasma OY-M hypothetical protein NP_950601.1 396223 R 262768 CDS NP_950602.1 39938836 2673016 complement(397128..397973) 1 NC_005303.2 identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum; hypothetical protein 397973 2673016 PAM_350 Onion yellows phytoplasma OY-M hypothetical protein NP_950602.1 397128 R 262768 CDS NP_950603.1 39938837 2673017 398554..398871 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 398871 2673017 PAM_351 Onion yellows phytoplasma OY-M hypothetical protein NP_950603.1 398554 D 262768 CDS NP_950604.1 39938838 2673505 399066..399539 1 NC_005303.2 identified by Glimmer2; hypothetical protein 399539 2673505 PAM_352 Onion yellows phytoplasma OY-M hypothetical protein NP_950604.1 399066 D 262768 CDS NP_950605.1 39938839 2673506 399502..400176 1 NC_005303.2 identified by Glimmer2; hypothetical protein 400176 2673506 PAM_353 Onion yellows phytoplasma OY-M hypothetical protein NP_950605.1 399502 D 262768 CDS NP_950606.1 39938840 2673507 400208..401287 1 NC_005303.2 identified by sequence similarity; putative; similar to DotG of Legionella pneumophila; hypothetical protein 401287 2673507 PAM_354 Onion yellows phytoplasma OY-M hypothetical protein NP_950606.1 400208 D 262768 CDS NP_950607.1 39938841 2672923 401509..404625 1 NC_005303.2 identified by sequence similarity; putative; ATP-dependent DNA helicase 404625 uvrD 2672923 uvrD Onion yellows phytoplasma OY-M ATP-dependent DNA helicase NP_950607.1 401509 D 262768 CDS NP_950608.1 39938842 2673595 complement(404838..406211) 1 NC_005303.2 identified by sequence similarity; putative; FtsH; ATP-dependent Zn protease 406211 hflB 2673595 hflB Onion yellows phytoplasma OY-M ATP-dependent Zn protease NP_950608.1 404838 R 262768 CDS NP_950609.1 39938843 2673132 complement(406254..406544) 1 NC_005303.2 identified by sequence similarity; putative; bacterial nucleoid DNA-binding protein 406544 himA 2673132 himA Onion yellows phytoplasma OY-M bacterial nucleoid DNA-binding protein NP_950609.1 406254 R 262768 CDS NP_950610.1 39938844 2673508 complement(407005..407484) 1 NC_005303.2 possible pseudogene of site-specific DNA methylase (dam); identified by sequence similarity; hypothetical protein 407484 2673508 PAM_358 Onion yellows phytoplasma OY-M hypothetical protein NP_950610.1 407005 R 262768 CDS NP_950611.1 39938845 2673348 complement(407793..408122) 1 NC_005303.2 identified by sequence similarity; putative; single-stranded DNA-binding protein 408122 ssb 2673348 ssb Onion yellows phytoplasma OY-M single-stranded DNA-binding protein NP_950611.1 407793 R 262768 CDS NP_950612.1 39938846 2673096 complement(408337..408966) 1 NC_005303.2 identified by sequence similarity; putative; DNA-directed RNA polymerase specialized sigma 408966 fliA 2673096 fliA Onion yellows phytoplasma OY-M DNA-directed RNA polymerase specialized sigma NP_950612.1 408337 R 262768 CDS NP_950613.1 39938847 2673509 409108..409602 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 409602 2673509 PAM_361 Onion yellows phytoplasma OY-M hypothetical protein NP_950613.1 409108 D 262768 CDS NP_950614.1 39938848 2673510 409617..410243 1 NC_005303.2 identified by Glimmer2; hypothetical protein 410243 2673510 PAM_362 Onion yellows phytoplasma OY-M hypothetical protein NP_950614.1 409617 D 262768 CDS NP_950615.1 39938849 2673467 410380..411000 1 NC_005303.2 identified by sequence similarity; putative; DNA-directed RNA polymerase specialized sigma 411000 fliA 2673467 fliA Onion yellows phytoplasma OY-M DNA-directed RNA polymerase specialized sigma NP_950615.1 410380 D 262768 CDS NP_950616.1 39938850 2673343 411005..411334 1 NC_005303.2 identified by sequence similarity; putative; single-stranded DNA-binding protein 411334 ssb 2673343 ssb Onion yellows phytoplasma OY-M single-stranded DNA-binding protein NP_950616.1 411005 D 262768 CDS NP_950617.1 39938851 2673469 411388..411678 1 NC_005303.2 identified by sequence similarity; putative; bacterial nucleoid DNA-binding protein 411678 himA 2673469 himA Onion yellows phytoplasma OY-M bacterial nucleoid DNA-binding protein NP_950617.1 411388 D 262768 CDS NP_950618.1 39938852 2673422 411721..413271 1 NC_005303.2 identified by sequence similarity; putative; FtsH; ATP-dependent Zn protease 413271 hflB 2673422 hflB Onion yellows phytoplasma OY-M ATP-dependent Zn protease NP_950618.1 411721 D 262768 CDS NP_950619.1 39938853 2673471 414099..414962 1 NC_005303.2 identified by Glimmer2; hypothetical protein 414962 2673471 PAM_367 Onion yellows phytoplasma OY-M hypothetical protein NP_950619.1 414099 D 262768 CDS NP_950620.1 39938854 2673472 414925..415332 1 NC_005303.2 identified by Glimmer2; hypothetical protein 415332 2673472 PAM_368 Onion yellows phytoplasma OY-M hypothetical protein NP_950620.1 414925 D 262768 CDS NP_950621.1 39938855 2673473 416146..416469 1 NC_005303.2 identified by Glimmer2; hypothetical protein 416469 2673473 PAM_369 Onion yellows phytoplasma OY-M hypothetical protein NP_950621.1 416146 D 262768 CDS NP_950622.1 39938856 2673474 416896..417708 1 NC_005303.2 possible pseudogene of ATP-dependent Zn proteaseHflB (FtsH); identified by sequence similarity; hypothetical protein 417708 2673474 PAM_370 Onion yellows phytoplasma OY-M hypothetical protein NP_950622.1 416896 D 262768 CDS NP_950623.1 39938857 2673475 417851..418417 1 NC_005303.2 identified by Glimmer2; hypothetical protein 418417 2673475 PAM_371 Onion yellows phytoplasma OY-M hypothetical protein NP_950623.1 417851 D 262768 CDS NP_950624.1 39938858 2673476 418473..418832 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 418832 2673476 PAM_372 Onion yellows phytoplasma OY-M hypothetical protein NP_950624.1 418473 D 262768 CDS NP_950625.1 39938859 2673477 419488..419937 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 419937 2673477 PAM_373 Onion yellows phytoplasma OY-M hypothetical protein NP_950625.1 419488 D 262768 CDS NP_950626.1 39938860 2673226 420049..420486 1 NC_005303.2 identified by sequence similarity; putative; thymidylate kinase 420486 tmk 2673226 tmk Onion yellows phytoplasma OY-M thymidylate kinase NP_950626.1 420049 D 262768 CDS NP_950627.1 39938861 2672960 422068..422565 1 NC_005303.2 possible pseudogene of replicative DNA helicase (DnaB); identified by sequence similarity; hypothetical protein 422565 2672960 PAM_375 Onion yellows phytoplasma OY-M hypothetical protein NP_950627.1 422068 D 262768 CDS NP_950628.1 39938862 2672961 423059..423451 1 NC_005303.2 possible pseudogene of DNA primase (DnaG); identified by sequence similarity; hypothetical protein 423451 2672961 PAM_376 Onion yellows phytoplasma OY-M hypothetical protein NP_950628.1 423059 D 262768 CDS NP_950629.1 39938863 2672962 423544..424179 1 NC_005303.2 identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum; hypothetical protein 424179 2672962 PAM_377 Onion yellows phytoplasma OY-M hypothetical protein NP_950629.1 423544 D 262768 CDS NP_950630.1 39938864 2672963 424246..424584 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 424584 2672963 PAM_378 Onion yellows phytoplasma OY-M hypothetical protein NP_950630.1 424246 D 262768 CDS NP_950631.1 39938865 2672964 425341..426198 1 NC_005303.2 identified by Glimmer2; hypothetical protein 426198 2672964 PAM_379 Onion yellows phytoplasma OY-M hypothetical protein NP_950631.1 425341 D 262768 CDS NP_950632.1 39938866 2673313 426668..427399 1 NC_005303.2 identified by sequence similarity; putative; chromosome segregation ATPase 427399 smc 2673313 smc Onion yellows phytoplasma OY-M chromosome segregation ATPase NP_950632.1 426668 D 262768 CDS NP_950633.1 39938867 2672965 427492..427803 1 NC_005303.2 identified by Glimmer2; hypothetical protein 427803 2672965 PAM_381 Onion yellows phytoplasma OY-M hypothetical protein NP_950633.1 427492 D 262768 CDS NP_950634.1 39938868 2672966 428227..428550 1 NC_005303.2 identified by Glimmer2; hypothetical protein 428550 2672966 PAM_382 Onion yellows phytoplasma OY-M hypothetical protein NP_950634.1 428227 D 262768 CDS NP_950635.1 39938869 2673546 428877..429335 1 NC_005303.2 identified by Glimmer2; hypothetical protein 429335 2673546 PAM_383 Onion yellows phytoplasma OY-M hypothetical protein NP_950635.1 428877 D 262768 CDS NP_950636.1 39938870 2673547 complement(430013..430201) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 430201 2673547 PAM_384 Onion yellows phytoplasma OY-M hypothetical protein NP_950636.1 430013 R 262768 CDS NP_950637.1 39938871 2673548 complement(430185..430763) 1 NC_005303.2 possible pseudogene of transposase (Tra5); identified by sequence similarity; hypothetical protein 430763 2673548 PAM_385 Onion yellows phytoplasma OY-M hypothetical protein NP_950637.1 430185 R 262768 CDS NP_950638.1 39938872 2673549 complement(431345..431971) 1 NC_005303.2 identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum; hypothetical protein 431971 2673549 PAM_386 Onion yellows phytoplasma OY-M hypothetical protein NP_950638.1 431345 R 262768 CDS NP_950639.1 39938873 2673550 complement(432561..433439) 1 NC_005303.2 possible pseudogene of DNA primase (DnaG); identified by sequence similarity; hypothetical protein 433439 2673550 PAM_387 Onion yellows phytoplasma OY-M hypothetical protein NP_950639.1 432561 R 262768 CDS NP_950640.1 39938874 2673057 complement(433451..434944) 1 NC_005303.2 identified by sequence similarity; putative; replicative DNA helicase 434944 dnaB 2673057 dnaB Onion yellows phytoplasma OY-M replicative DNA helicase NP_950640.1 433451 R 262768 CDS NP_950641.1 39938875 2673551 complement(434946..435569) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 435569 2673551 PAM_389 Onion yellows phytoplasma OY-M hypothetical protein NP_950641.1 434946 R 262768 CDS NP_950642.1 39938876 2673204 complement(435989..436369) 1 NC_005303.2 possible pseudogene of thymidylate kinase; identified by sequence similarity; putative; hypothetical protein 436369 2673204 PAM_390 Onion yellows phytoplasma OY-M hypothetical protein NP_950642.1 435989 R 262768 CDS NP_950643.1 39938877 2673205 complement(436440..437078) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 437078 2673205 PAM_391 Onion yellows phytoplasma OY-M hypothetical protein NP_950643.1 436440 R 262768 CDS NP_950644.1 39938878 2673206 complement(437673..438128) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 438128 2673206 PAM_392 Onion yellows phytoplasma OY-M hypothetical protein NP_950644.1 437673 R 262768 CDS NP_950645.1 39938879 2673596 complement(438220..440514) 1 NC_005303.2 identified by sequence similarity; putative; FtsH; ATP-dependent Zn protease 440514 hflB 2673596 hflB Onion yellows phytoplasma OY-M ATP-dependent Zn protease NP_950645.1 438220 R 262768 CDS NP_950646.1 39938880 2673600 complement(440557..440847) 1 NC_005303.2 identified by sequence similarity; putative; bacterial nucleoid DNA-binding protein 440847 himA 2673600 himA Onion yellows phytoplasma OY-M bacterial nucleoid DNA-binding protein NP_950646.1 440557 R 262768 CDS NP_950647.1 39938881 2673254 complement(440956..441615) 1 NC_005303.2 identified by sequence similarity; putative; site-specific DNA methylase 441615 dam 2673254 dam Onion yellows phytoplasma OY-M site-specific DNA methylase NP_950647.1 440956 R 262768 CDS NP_950648.1 39938882 2673349 complement(442093..442422) 1 NC_005303.2 identified by sequence similarity; putative; single-stranded DNA-binding protein 442422 ssb 2673349 ssb Onion yellows phytoplasma OY-M single-stranded DNA-binding protein NP_950648.1 442093 R 262768 CDS NP_950649.1 39938883 2673207 complement(442897..443292) 1 NC_005303.2 possible pseudogene of DNA-directed RNA polymerase specialized sigma subunit (FliA); identified by sequence; hypothetical protein 443292 2673207 PAM_397 Onion yellows phytoplasma OY-M hypothetical protein NP_950649.1 442897 R 262768 CDS NP_950650.1 39938884 2673208 443637..443972 1 NC_005303.2 possible pseudogene of site-specific DNA methylase (dam); identified by sequence similarity; hypothetical protein 443972 2673208 PAM_398 Onion yellows phytoplasma OY-M hypothetical protein NP_950650.1 443637 D 262768 CDS NP_950651.1 39938885 2673209 444553..444969 1 NC_005303.2 identified by Glimmer2; hypothetical protein 444969 2673209 PAM_399 Onion yellows phytoplasma OY-M hypothetical protein NP_950651.1 444553 D 262768 CDS NP_950652.1 39938886 2673210 444994..445443 1 NC_005303.2 identified by Glimmer2; hypothetical protein 445443 2673210 PAM_400 Onion yellows phytoplasma OY-M hypothetical protein NP_950652.1 444994 D 262768 CDS NP_950653.1 39938887 2673064 445471..445902 1 NC_005303.2 identified by Glimmer2; hypothetical protein 445902 2673064 PAM_401 Onion yellows phytoplasma OY-M hypothetical protein NP_950653.1 445471 D 262768 CDS NP_950654.1 39938888 2673470 445899..446189 1 NC_005303.2 identified by sequence similarity; putative; bacterial nucleoid DNA-binding protein 446189 himA 2673470 himA Onion yellows phytoplasma OY-M bacterial nucleoid DNA-binding protein NP_950654.1 445899 D 262768 CDS NP_950655.1 39938889 2673147 446232..448592 1 NC_005303.2 identified by sequence similarity; putative; FtsH; ATP-dependent Zn protease 448592 hflB 2673147 hflB Onion yellows phytoplasma OY-M ATP-dependent Zn protease NP_950655.1 446232 D 262768 CDS NP_950656.1 39938890 2673065 448608..448931 1 NC_005303.2 identified by Glimmer2; hypothetical protein 448931 2673065 PAM_404 Onion yellows phytoplasma OY-M hypothetical protein NP_950656.1 448608 D 262768 CDS NP_950657.1 39938891 2673066 449258..449716 1 NC_005303.2 identified by Glimmer2; hypothetical protein 449716 2673066 PAM_405 Onion yellows phytoplasma OY-M hypothetical protein NP_950657.1 449258 D 262768 CDS NP_950658.1 39938892 2673384 complement(450732..451340) 1 NC_005303.2 identified by sequence similarity; putative; putative transposase 451340 tra5 2673384 tra5 Onion yellows phytoplasma OY-M putative transposase NP_950658.1 450732 R 262768 CDS NP_950659.1 39938893 2673067 complement(451784..452338) 1 NC_005303.2 identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum; hypothetical protein 452338 2673067 PAM_407 Onion yellows phytoplasma OY-M hypothetical protein NP_950659.1 451784 R 262768 CDS NP_950660.1 39938894 2673037 453299..453898 1 NC_005303.2 identified by sequence similarity; putative; DNA-directed RNA polymerase sigma subunit 453898 rpoD 2673037 rpoD Onion yellows phytoplasma OY-M DNA-directed RNA polymerase sigma subunit NP_950660.1 453299 D 262768 CDS NP_950661.1 39938895 2673534 454082..454966 1 NC_005303.2 identified by sequence similarity; putative; site-specific DNA methylase 454966 dam 2673534 dam Onion yellows phytoplasma OY-M site-specific DNA methylase NP_950661.1 454082 D 262768 CDS NP_950662.1 39938896 2673344 455138..455473 1 NC_005303.2 identified by sequence similarity; putative; single-stranded DNA-binding protein 455473 ssb 2673344 ssb Onion yellows phytoplasma OY-M single-stranded DNA-binding protein NP_950662.1 455138 D 262768 CDS NP_950663.1 39938897 2673068 complement(457519..458022) 1 NC_005303.2 identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum; hypothetical protein 458022 2673068 PAM_411 Onion yellows phytoplasma OY-M hypothetical protein NP_950663.1 457519 R 262768 CDS NP_950664.1 39938898 2673069 complement(458035..458352) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 458352 2673069 PAM_412 Onion yellows phytoplasma OY-M hypothetical protein NP_950664.1 458035 R 262768 CDS NP_950665.1 39938899 2672926 complement(458850..461282) 1 NC_005303.2 identified by sequence similarity; putative; ATP-dependent DNA helicase 461282 uvrD 2672926 uvrD Onion yellows phytoplasma OY-M ATP-dependent DNA helicase NP_950665.1 458850 R 262768 CDS NP_950666.1 39938900 2673070 complement(462170..463150) 1 NC_005303.2 identified by sequence similarity; putative; similar to DotG of Legionella pneumophila; hypothetical protein 463150 2673070 PAM_414 Onion yellows phytoplasma OY-M hypothetical protein NP_950666.1 462170 R 262768 CDS NP_950667.1 39938901 2673171 complement(463182..463592) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 463592 2673171 PAM_415 Onion yellows phytoplasma OY-M hypothetical protein NP_950667.1 463182 R 262768 CDS NP_950668.1 39938902 2673172 complement(463872..464291) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 464291 2673172 PAM_416 Onion yellows phytoplasma OY-M hypothetical protein NP_950668.1 463872 R 262768 CDS NP_950669.1 39938903 2673173 complement(464516..464833) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 464833 2673173 PAM_417 Onion yellows phytoplasma OY-M hypothetical protein NP_950669.1 464516 R 262768 CDS NP_950670.1 39938904 2673174 complement(465284..466435) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 466435 2673174 PAM_418 Onion yellows phytoplasma OY-M hypothetical protein NP_950670.1 465284 R 262768 CDS NP_950671.1 39938905 2673175 complement(466441..467253) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 467253 2673175 PAM_419 Onion yellows phytoplasma OY-M hypothetical protein NP_950671.1 466441 R 262768 CDS YP_002154415.1 380343400 8303594 complement(467350..467559) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 467559 8303594 PAM_755 Onion yellows phytoplasma OY-M hypothetical protein YP_002154415.1 467350 R 262768 CDS YP_002154416.1 380343401 8303596 complement(467641..467976) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 467976 8303596 PAM_756 Onion yellows phytoplasma OY-M hypothetical protein YP_002154416.1 467641 R 262768 CDS YP_002154417.1 380343402 8303597 complement(468015..468158) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 468158 8303597 PAM_757 Onion yellows phytoplasma OY-M hypothetical protein YP_002154417.1 468015 R 262768 CDS YP_002154418.1 380343403 2673601 complement(468172..468504) 1 NC_005303.2 identified by sequence similarity; putative; bacterial nucleoid DNA-binding protein 468504 himA 2673601 himA Onion yellows phytoplasma OY-M bacterial nucleoid DNA-binding protein YP_002154418.1 468172 R 262768 CDS YP_002154419.1 380343404 2673350 complement(468563..468877) 1 NC_005303.2 identified by sequence similarity; putative; single-stranded DNA-binding protein 468877 ssb 2673350 ssb Onion yellows phytoplasma OY-M single-stranded DNA-binding protein YP_002154419.1 468563 R 262768 CDS YP_002154420.1 380343405 2673097 complement(468879..469505) 1 NC_005303.2 identified by sequence similarity; putative; DNA-directed RNA polymerase sigma subunit 469505 rpoD 2673097 rpoD Onion yellows phytoplasma OY-M DNA-directed RNA polymerase sigma subunit YP_002154420.1 468879 R 262768 CDS YP_002154421.1 380343406 8303595 469698..469946 1 NC_005303.2 identified by Glimmer2; hypothetical protein 469946 8303595 PAM_761 Onion yellows phytoplasma OY-M hypothetical protein YP_002154421.1 469698 D 262768 CDS YP_002154422.1 380343407 8303598 469952..470650 1 NC_005303.2 identified by sequence similarity; putative; FtsH; ATP-dependent Zn protease 470650 hflB 8303598 hflB Onion yellows phytoplasma OY-M ATP-dependent Zn protease YP_002154422.1 469952 D 262768 CDS YP_002154423.1 380343408 8303599 complement(471114..473126) 1 NC_005303.2 identified by sequence similarity; putative; helicase subunit of the DNA excision repair 473126 uvrB 8303599 uvrB Onion yellows phytoplasma OY-M helicase subunit of the DNA excision repair YP_002154423.1 471114 R 262768 CDS NP_950685.1 39938919 2673169 complement(473494..474879) 1 NC_005303.2 identified by sequence similarity; putative; nuclease subunit of the excinuclease complex 474879 uvrC 2673169 uvrC Onion yellows phytoplasma OY-M nuclease subunit of the excinuclease complex NP_950685.1 473494 R 262768 CDS NP_950686.1 39938920 2673199 475432..476298 1 NC_005303.2 identified by sequence similarity; putative; pyridoxal/pyridoxine/pyridoxamine kinase 476298 pdxK 2673199 pdxK Onion yellows phytoplasma OY-M pyridoxal/pyridoxine/pyridoxamine kinase NP_950686.1 475432 D 262768 CDS NP_950687.1 39938921 2673529 complement(476422..477027) 1 NC_005303.2 identified by sequence similarity; putative; nitroreductase 477027 nfnB 2673529 nfnB Onion yellows phytoplasma OY-M nitroreductase NP_950687.1 476422 R 262768 CDS NP_950688.1 39938922 2673280 477674..478192 1 NC_005303.2 identified by sequence similarity; putative; predicted membrane protein; hypothetical protein 478192 2673280 PAM_436 Onion yellows phytoplasma OY-M hypothetical protein NP_950688.1 477674 D 262768 CDS NP_950689.1 39938923 2673281 478198..478374 1 NC_005303.2 identified by sequence similarity; putative; predicted membrane protein; hypothetical protein 478374 2673281 PAM_437 Onion yellows phytoplasma OY-M hypothetical protein NP_950689.1 478198 D 262768 CDS NP_950690.1 39938924 2673451 478512..480527 1 NC_005303.2 identified by sequence similarity; putative; NAD-dependent DNA ligase 480527 lig 2673451 lig Onion yellows phytoplasma OY-M NAD-dependent DNA ligase NP_950690.1 478512 D 262768 CDS NP_950691.1 39938925 2673282 480602..481672 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 481672 2673282 PAM_439 Onion yellows phytoplasma OY-M hypothetical protein NP_950691.1 480602 D 262768 CDS NP_950692.1 39938926 2673059 481644..482027 1 NC_005303.2 identified by sequence similarity; putative; phosphopantetheinyl transferase 482027 acpS 2673059 acpS Onion yellows phytoplasma OY-M phosphopantetheinyl transferase NP_950692.1 481644 D 262768 CDS NP_950693.1 39938927 2673633 482172..483515 1 NC_005303.2 identified by sequence similarity; putative; NAD-dependent dehydrogenase 483515 hcaD 2673633 hcaD Onion yellows phytoplasma OY-M NAD-dependent dehydrogenase NP_950693.1 482172 D 262768 CDS NP_950694.1 39938928 2673319 483706..484314 1 NC_005303.2 identified by sequence similarity; putative; superoxide dismutase 484314 sodA 2673319 sodA Onion yellows phytoplasma OY-M superoxide dismutase NP_950694.1 483706 D 262768 CDS NP_950695.1 39938929 2673673 484321..484770 1 NC_005303.2 identified by sequence similarity; putative; transcription termination factor 484770 nusB 2673673 nusB Onion yellows phytoplasma OY-M transcription termination factor NP_950695.1 484321 D 262768 CDS NP_950696.1 39938930 2673283 485212..486027 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 486027 2673283 PAM_444 Onion yellows phytoplasma OY-M hypothetical protein NP_950696.1 485212 D 262768 CDS NP_950697.1 39938931 2673430 486559..488376 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 488376 lepA 2673430 lepA Onion yellows phytoplasma OY-M hypothetical protein NP_950697.1 486559 D 262768 CDS NP_950698.1 39938932 2673284 complement(488475..488885) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 488885 2673284 PAM_446 Onion yellows phytoplasma OY-M hypothetical protein NP_950698.1 488475 R 262768 CDS NP_950699.2 255961249 2673224 489196..490575 1 NC_005303.2 identified by sequence similarity; putative; predicted Zn-dependent protease; hypothetical protein 490575 tldD 2673224 tldD Onion yellows phytoplasma OY-M hypothetical protein NP_950699.2 489196 D 262768 CDS YP_002154424.1 380343409 8303600 490572..491948 1 NC_005303.2 identified by sequence similarity; putative; predicted Zn-dependent protease; hypothetical protein 491948 pmbA 8303600 pmbA Onion yellows phytoplasma OY-M hypothetical protein YP_002154424.1 490572 D 262768 CDS NP_950700.1 39938934 2673376 complement(492103..494478) 1 NC_005303.2 identified by sequence similarity; putative; ATP-dependent Lon protease 494478 lon 2673376 lon Onion yellows phytoplasma OY-M ATP-dependent Lon protease NP_950700.1 492103 R 262768 CDS NP_950701.1 39938935 2673585 complement(494565..495857) 1 NC_005303.2 identified by sequence similarity; putative; FKBP-type peptidyl-prolyl cis-trans isomerase 495857 tig 2673585 tig Onion yellows phytoplasma OY-M FKBP-type peptidyl-prolyl cis-trans isomerase NP_950701.1 494565 R 262768 CDS NP_950702.1 39938936 2673167 complement(496528..499446) 1 NC_005303.2 identified by sequence similarity; putative; excinuclease ATPase subunit 499446 uvrA 2673167 uvrA Onion yellows phytoplasma OY-M excinuclease ATPase subunit NP_950702.1 496528 R 262768 CDS NP_950703.1 39938937 2672976 500414..500767 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 500767 2672976 PAM_451 Onion yellows phytoplasma OY-M hypothetical protein NP_950703.1 500414 D 262768 CDS NP_950704.1 39938938 2672977 500774..501172 1 NC_005303.2 identified by Glimmer2; similar to phosphotransacetylase of Thermoanaerobacter tengcongensis; hypothetical protein 501172 2672977 PAM_452 Onion yellows phytoplasma OY-M hypothetical protein NP_950704.1 500774 D 262768 CDS NP_950705.1 39938939 2673322 501698..502771 1 NC_005303.2 identified by sequence similarity; putative; superfamily II DNA and RNA helicase 502771 srmB 2673322 srmB Onion yellows phytoplasma OY-M superfamily II DNA and RNA helicase NP_950705.1 501698 D 262768 CDS NP_950706.1 39938940 2673297 503294..504172 1 NC_005303.2 identified by sequence similarity; putative; endonuclease IV 504172 nfo 2673297 nfo Onion yellows phytoplasma OY-M endonuclease IV NP_950706.1 503294 D 262768 CDS NP_950707.1 39938941 2672920 505066..506739 1 NC_005303.2 identified by sequence similarity; putative; arginyl-tRNA synthetase 506739 argS 2672920 argS Onion yellows phytoplasma OY-M arginyl-tRNA synthetase NP_950707.1 505066 D 262768 CDS NP_950708.1 39938942 2673427 507001..508794 1 NC_005303.2 identified by sequence similarity; putative; ABC-type amino acid transport system, permease 508794 artM 2673427 artM Onion yellows phytoplasma OY-M ABC-type amino acid transport system, permease NP_950708.1 507001 D 262768 CDS NP_950709.1 39938943 2673029 508817..510646 1 NC_005303.2 identified by sequence similarity; putative; ABC-type amino acid transport system, periplasmic component 510646 artI 2673029 artI Onion yellows phytoplasma OY-M ABC-type amino acid transport system, periplasmic component NP_950709.1 508817 D 262768 CDS NP_950710.1 39938944 2672978 complement(512523..512960) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 512960 2672978 PAM_458 Onion yellows phytoplasma OY-M hypothetical protein NP_950710.1 512523 R 262768 CDS NP_950711.1 39938945 2672979 complement(512960..513976) 1 NC_005303.2 identified by sequence similarity; putative; similar to DotG of Legionella pneumophila; hypothetical protein 513976 2672979 PAM_459 Onion yellows phytoplasma OY-M hypothetical protein NP_950711.1 512960 R 262768 CDS NP_950712.1 39938946 2672980 complement(514166..514495) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 514495 2672980 PAM_460 Onion yellows phytoplasma OY-M hypothetical protein NP_950712.1 514166 R 262768 CDS NP_950713.1 39938947 2672981 complement(514916..515203) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 515203 2672981 PAM_461 Onion yellows phytoplasma OY-M hypothetical protein NP_950713.1 514916 R 262768 CDS NP_950714.1 39938948 2672982 complement(515398..515715) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 515715 2672982 PAM_462 Onion yellows phytoplasma OY-M hypothetical protein NP_950714.1 515398 R 262768 CDS NP_950715.1 39938949 2673642 516641..517093 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 517093 2673642 PAM_463 Onion yellows phytoplasma OY-M hypothetical protein NP_950715.1 516641 D 262768 CDS NP_950716.1 39938950 2673431 517096..517482 1 NC_005303.2 identified by sequence similarity; putative; ABC-type amino acid transport system, permease 517482 artM 2673431 artM Onion yellows phytoplasma OY-M ABC-type amino acid transport system, permease NP_950716.1 517096 D 262768 CDS NP_950717.1 39938951 2673028 518128..522843 1 NC_005303.2 identified by sequence similarity; putative; DNA polymerase III alpha subunit 522843 polC 2673028 polC Onion yellows phytoplasma OY-M DNA polymerase III alpha subunit NP_950717.1 518128 D 262768 CDS NP_950718.1 39938952 2673392 522922..523959 1 NC_005303.2 identified by sequence similarity; putative; tryptophanyl-tRNA synthetase 523959 trpS 2673392 trpS Onion yellows phytoplasma OY-M tryptophanyl-tRNA synthetase NP_950718.1 522922 D 262768 CDS NP_950719.1 39938953 2673448 complement(524013..524456) 1 NC_005303.2 identified by sequence similarity; putative; protein NifU 524456 iscU 2673448 iscU Onion yellows phytoplasma OY-M protein NifU NP_950719.1 524013 R 262768 CDS NP_950720.1 39938954 2673356 complement(524471..525676) 1 NC_005303.2 identified by sequence similarity; putative; selenocysteine lyase 525676 csdB 2673356 csdB Onion yellows phytoplasma OY-M selenocysteine lyase NP_950720.1 524471 R 262768 CDS NP_950721.1 39938955 2673161 complement(525753..526994) 1 NC_005303.2 identified by sequence similarity; putative; tyrosyl-tRNA synthetase 526994 tyrS 2673161 tyrS Onion yellows phytoplasma OY-M tyrosyl-tRNA synthetase NP_950721.1 525753 R 262768 CDS NP_950722.1 39938956 2673305 complement(527179..527535) 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L19 527535 rplS 2673305 rplS Onion yellows phytoplasma OY-M ribosomal protein L19 NP_950722.1 527179 R 262768 CDS NP_950723.1 39938957 2673389 complement(527577..528305) 1 NC_005303.2 identified by sequence similarity; putative; tRNA-(guanine-N1)-methyltransferase 528305 trmD 2673389 trmD Onion yellows phytoplasma OY-M tRNA-(guanine-N1)-methyltransferase NP_950723.1 527577 R 262768 CDS NP_950724.1 39938958 2673662 complement(528365..528628) 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S16 528628 rpsP 2673662 rpsP Onion yellows phytoplasma OY-M ribosomal protein S16 NP_950724.1 528365 R 262768 CDS NP_950725.1 39938959 2673111 complement(529079..530188) 1 NC_005303.2 identified by sequence similarity; putative; protein chain release factor B 530188 prfB 2673111 prfB Onion yellows phytoplasma OY-M protein chain release factor B NP_950725.1 529079 R 262768 CDS NP_950726.1 39938960 2673413 complement(530192..532699) 1 NC_005303.2 identified by sequence similarity; putative; preprotein translocase subunit SecA 532699 secA 2673413 secA Onion yellows phytoplasma OY-M preprotein translocase subunit SecA NP_950726.1 530192 R 262768 CDS NP_950727.1 39938961 2673643 533079..533180 1 NC_005303.2 identified by Glimmer2; hypothetical protein 533180 2673643 PAM_475 Onion yellows phytoplasma OY-M hypothetical protein NP_950727.1 533079 D 262768 CDS NP_950728.1 39938962 2673526 complement(533318..533827) 1 NC_005303.2 identified by sequence similarity; putative; MutT/nudix family protein 533827 mutT 2673526 mutT Onion yellows phytoplasma OY-M MutT/nudix family protein NP_950728.1 533318 R 262768 CDS NP_950729.1 39938963 2673644 complement(534581..535153) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 535153 2673644 PAM_477 Onion yellows phytoplasma OY-M hypothetical protein NP_950729.1 534581 R 262768 CDS NP_950730.1 39938964 2673645 complement(536639..537271) 1 NC_005303.2 identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum; hypothetical protein 537271 2673645 PAM_478 Onion yellows phytoplasma OY-M hypothetical protein NP_950730.1 536639 R 262768 CDS NP_950731.1 39938965 2673646 complement(537294..538157) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 538157 2673646 PAM_479 Onion yellows phytoplasma OY-M hypothetical protein NP_950731.1 537294 R 262768 CDS NP_950732.1 39938966 2673048 complement(538332..539384) 1 NC_005303.2 identified by sequence similarity; putative; FtsH; ATP-dependent Zn protease 539384 hflB 2673048 hflB Onion yellows phytoplasma OY-M ATP-dependent Zn protease NP_950732.1 538332 R 262768 CDS NP_950733.1 39938967 2673647 complement(540710..541201) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 541201 2673647 PAM_481 Onion yellows phytoplasma OY-M hypothetical protein NP_950733.1 540710 R 262768 CDS NP_950734.1 39938968 2673648 complement(541409..541867) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 541867 2673648 PAM_482 Onion yellows phytoplasma OY-M hypothetical protein NP_950734.1 541409 R 262768 CDS NP_950735.1 39938969 2673649 complement(541906..542544) 1 NC_005303.2 identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum; hypothetical protein 542544 2673649 PAM_483 Onion yellows phytoplasma OY-M hypothetical protein NP_950735.1 541906 R 262768 CDS NP_950736.1 39938970 2673650 543271..543876 1 NC_005303.2 identified by Glimmer2; hypothetical protein 543876 2673650 PAM_484 Onion yellows phytoplasma OY-M hypothetical protein NP_950736.1 543271 D 262768 CDS NP_950737.1 39938971 2673481 complement(544021..544533) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 544533 2673481 PAM_485 Onion yellows phytoplasma OY-M hypothetical protein NP_950737.1 544021 R 262768 CDS YP_005271251.1 380343410 8303593 complement(545398..545610) 1 NC_005303.2 identified by Glimmer2; tengu-su inducer 545610 tengu 8303593 tengu Onion yellows phytoplasma OY-M tengu-su inducer YP_005271251.1 545398 R 262768 CDS NP_950738.1 39938972 2673482 546002..546577 1 NC_005303.2 identified by Glimmer2; hypothetical protein 546577 2673482 PAM_486 Onion yellows phytoplasma OY-M hypothetical protein NP_950738.1 546002 D 262768 CDS NP_950739.1 39938973 2673228 546971..547669 1 NC_005303.2 identified by sequence similarity; putative; ABC-type amino acid transport system, permease 547669 artM 2673228 artM Onion yellows phytoplasma OY-M ABC-type amino acid transport system, permease NP_950739.1 546971 D 262768 CDS NP_950740.1 39938974 2673454 547662..548408 1 NC_005303.2 identified by sequence similarity; putative; ABC-type polar amino acid transport system, ATPase component 548408 glnQ 2673454 glnQ Onion yellows phytoplasma OY-M ABC-type polar amino acid transport system, ATPase component NP_950740.1 547662 D 262768 CDS NP_950741.1 39938975 2673382 548612..549574 1 NC_005303.2 identified by sequence similarity; putative; ABC-type amino acid transport system, periplasmic component 549574 artI 2673382 artI Onion yellows phytoplasma OY-M ABC-type amino acid transport system, periplasmic component NP_950741.1 548612 D 262768 CDS NP_950742.1 39938976 2673623 549577..550311 1 NC_005303.2 identified by sequence similarity; putative; ABC-type amino acid transport system, permease 550311 artM 2673623 artM Onion yellows phytoplasma OY-M ABC-type amino acid transport system, permease NP_950742.1 549577 D 262768 CDS NP_950743.1 39938977 2673483 550598..550903 1 NC_005303.2 identified by Glimmer2; hypothetical protein 550903 2673483 PAM_491 Onion yellows phytoplasma OY-M hypothetical protein NP_950743.1 550598 D 262768 CDS NP_950745.1 39938979 2673485 complement(558252..558833) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 558833 2673485 PAM_493 Onion yellows phytoplasma OY-M hypothetical protein NP_950745.1 558252 R 262768 CDS NP_950746.1 39938980 2673285 complement(559170..559448) 1 NC_005303.2 identified by sequence similarity; putative; ABC-type amino acid transport system, permease 559448 artM 2673285 artM Onion yellows phytoplasma OY-M ABC-type amino acid transport system, permease NP_950746.1 559170 R 262768 CDS NP_950747.1 39938981 2673032 complement(559537..560544) 1 NC_005303.2 identified by sequence similarity; putative; ABC-type amino acid transport system, periplasmic component 560544 artI 2673032 artI Onion yellows phytoplasma OY-M ABC-type amino acid transport system, periplasmic component NP_950747.1 559537 R 262768 CDS NP_950748.1 39938982 2673486 complement(560833..561162) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 561162 2673486 PAM_496 Onion yellows phytoplasma OY-M hypothetical protein NP_950748.1 560833 R 262768 CDS NP_950749.1 39938983 2673487 561379..561885 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 561885 2673487 PAM_497 Onion yellows phytoplasma OY-M hypothetical protein NP_950749.1 561379 D 262768 CDS NP_950750.1 39938984 2673632 562356..564371 1 NC_005303.2 identified by sequence similarity; putative; DNA gyrase beta subunit 564371 gyrB 2673632 gyrB Onion yellows phytoplasma OY-M DNA gyrase beta subunit NP_950750.1 562356 D 262768 CDS NP_950751.1 39938985 2672908 564456..566963 1 NC_005303.2 identified by sequence similarity; putative; DNA gyrase alpha subunit 566963 gyrA 2672908 gyrA Onion yellows phytoplasma OY-M DNA gyrase alpha subunit NP_950751.1 564456 D 262768 CDS NP_950752.1 39938986 2673488 567058..567558 1 NC_005303.2 identified by sequence similarity; putative; predicted ATPase; hypothetical protein 567558 2673488 PAM_500 Onion yellows phytoplasma OY-M hypothetical protein NP_950752.1 567058 D 262768 CDS NP_950753.1 39938987 2673178 567555..568268 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 568268 2673178 PAM_501 Onion yellows phytoplasma OY-M hypothetical protein NP_950753.1 567555 D 262768 CDS NP_950754.1 39938988 2673179 568622..570076 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 570076 2673179 PAM_502 Onion yellows phytoplasma OY-M hypothetical protein NP_950754.1 568622 D 262768 CDS NP_950755.1 39938989 2673180 570235..570435 1 NC_005303.2 possible pseudogene of DNA-directed RNA polymerase specialized sigma subunit (FliA); identified by sequence; hypothetical protein 570435 2673180 PAM_503 Onion yellows phytoplasma OY-M hypothetical protein NP_950755.1 570235 D 262768 CDS NP_950756.1 39938990 2673181 complement(570647..571102) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 571102 2673181 PAM_504 Onion yellows phytoplasma OY-M hypothetical protein NP_950756.1 570647 R 262768 CDS NP_950757.1 39938991 2672927 complement(571147..573768) 1 NC_005303.2 identified by sequence similarity; putative; ATP-dependent DNA helicase 573768 uvrD 2672927 uvrD Onion yellows phytoplasma OY-M ATP-dependent DNA helicase NP_950757.1 571147 R 262768 CDS NP_950758.1 39938992 2673182 complement(573949..574626) 1 NC_005303.2 identified by sequence similarity; putative; similar to DotG of Legionella pneumophila; hypothetical protein 574626 2673182 PAM_506 Onion yellows phytoplasma OY-M hypothetical protein NP_950758.1 573949 R 262768 CDS NP_950759.1 39938993 2673183 complement(574616..575107) 1 NC_005303.2 possible pseudogene of DotG homolog; identified by sequence similarity; hypothetical protein 575107 2673183 PAM_507 Onion yellows phytoplasma OY-M hypothetical protein NP_950759.1 574616 R 262768 CDS NP_950760.1 39938994 2673184 complement(575139..575801) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 575801 2673184 PAM_508 Onion yellows phytoplasma OY-M hypothetical protein NP_950760.1 575139 R 262768 CDS NP_950761.1 39938995 2673185 complement(576075..576248) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 576248 2673185 PAM_509 Onion yellows phytoplasma OY-M hypothetical protein NP_950761.1 576075 R 262768 CDS NP_950762.1 39938996 2673186 complement(576443..576775) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 576775 2673186 PAM_510 Onion yellows phytoplasma OY-M hypothetical protein NP_950762.1 576443 R 262768 CDS NP_950763.1 39938997 2673590 577680..578285 1 NC_005303.2 identified by sequence similarity; putative; DNA-directed RNA polymerase specialized sigma 578285 fliA 2673590 fliA Onion yellows phytoplasma OY-M DNA-directed RNA polymerase specialized sigma NP_950763.1 577680 D 262768 CDS NP_950764.1 39938998 2673345 578517..578846 1 NC_005303.2 identified by sequence similarity; putative; single-stranded DNA-binding protein 578846 ssb 2673345 ssb Onion yellows phytoplasma OY-M single-stranded DNA-binding protein NP_950764.1 578517 D 262768 CDS NP_950765.1 39938999 2673130 578883..579173 1 NC_005303.2 identified by sequence similarity; putative; bacterial nucleoid DNA-binding protein 579173 himA 2673130 himA Onion yellows phytoplasma OY-M bacterial nucleoid DNA-binding protein NP_950765.1 578883 D 262768 CDS NP_950766.1 39939000 2673211 579216..581006 1 NC_005303.2 identified by sequence similarity; putative; putative ATPase; hypothetical protein 581006 2673211 PAM_514 Onion yellows phytoplasma OY-M hypothetical protein NP_950766.1 579216 D 262768 CDS NP_950767.1 39939001 2673212 582041..582913 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 582913 2673212 PAM_515 Onion yellows phytoplasma OY-M hypothetical protein NP_950767.1 582041 D 262768 CDS NP_950768.1 39939002 2673314 583668..584012 1 NC_005303.2 identified by sequence similarity; putative; chromosome segregation ATPase 584012 smc 2673314 smc Onion yellows phytoplasma OY-M chromosome segregation ATPase NP_950768.1 583668 D 262768 CDS NP_950769.1 39939003 2673213 584078..584812 1 NC_005303.2 identified by Glimmer2; hypothetical protein 584812 2673213 PAM_517 Onion yellows phytoplasma OY-M hypothetical protein NP_950769.1 584078 D 262768 CDS NP_950770.1 39939004 2673214 584862..585269 1 NC_005303.2 identified by Glimmer2; hypothetical protein 585269 2673214 PAM_518 Onion yellows phytoplasma OY-M hypothetical protein NP_950770.1 584862 D 262768 CDS NP_950771.1 39939005 2673215 585303..585638 1 NC_005303.2 identified by Glimmer2; hypothetical protein 585638 2673215 PAM_519 Onion yellows phytoplasma OY-M hypothetical protein NP_950771.1 585303 D 262768 CDS NP_950772.1 39939006 2673216 586183..586833 1 NC_005303.2 identified by sequence similarity; putative; similar to ORF A of Phytoplasma sp.; hypothetical protein 586833 2673216 PAM_520 Onion yellows phytoplasma OY-M hypothetical protein NP_950772.1 586183 D 262768 CDS NP_950773.1 39939007 2673457 586909..587523 1 NC_005303.2 identified by sequence similarity; putative; thymidylate kinase 587523 tmk 2673457 tmk Onion yellows phytoplasma OY-M thymidylate kinase NP_950773.1 586909 D 262768 CDS NP_950774.1 39939008 2673217 587659..588270 1 NC_005303.2 identified by Glimmer2; hypothetical protein 588270 2673217 PAM_522 Onion yellows phytoplasma OY-M hypothetical protein NP_950774.1 587659 D 262768 CDS NP_950775.1 39939009 2673129 588275..589774 1 NC_005303.2 identified by sequence similarity; putative; replicative DNA helicase 589774 dnaB 2673129 dnaB Onion yellows phytoplasma OY-M replicative DNA helicase NP_950775.1 588275 D 262768 CDS NP_950776.1 39939010 2673223 589785..591110 1 NC_005303.2 identified by sequence similarity; putative; DNA primase 591110 dnaG 2673223 dnaG Onion yellows phytoplasma OY-M DNA primase NP_950776.1 589785 D 262768 CDS NP_950777.1 39939011 2673218 591130..591768 1 NC_005303.2 identified by Glimmer2; hypothetical protein 591768 2673218 PAM_525 Onion yellows phytoplasma OY-M hypothetical protein NP_950777.1 591130 D 262768 CDS NP_950778.1 39939012 2673219 592342..592800 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 592800 2673219 PAM_526 Onion yellows phytoplasma OY-M hypothetical protein NP_950778.1 592342 D 262768 CDS NP_950779.1 39939013 2672928 complement(593013..596129) 1 NC_005303.2 identified by sequence similarity; putative; ATP-dependent DNA helicase 596129 uvrD 2672928 uvrD Onion yellows phytoplasma OY-M ATP-dependent DNA helicase NP_950779.1 593013 R 262768 CDS NP_950780.1 39939014 2673265 complement(596565..597347) 1 NC_005303.2 identified by sequence similarity; putative; similar to DotG of Legionella pneumophila; hypothetical protein 597347 2673265 PAM_528 Onion yellows phytoplasma OY-M hypothetical protein NP_950780.1 596565 R 262768 CDS NP_950781.1 39939015 2673266 complement(597379..597684) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 597684 2673266 PAM_529 Onion yellows phytoplasma OY-M hypothetical protein NP_950781.1 597379 R 262768 CDS NP_950782.1 39939016 2673267 complement(597674..598042) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 598042 2673267 PAM_530 Onion yellows phytoplasma OY-M hypothetical protein NP_950782.1 597674 R 262768 CDS NP_950783.1 39939017 2673268 complement(598683..599015) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 599015 2673268 PAM_531 Onion yellows phytoplasma OY-M hypothetical protein NP_950783.1 598683 R 262768 CDS NP_950784.1 39939018 2673269 complement(599487..601100) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 601100 2673269 PAM_532 Onion yellows phytoplasma OY-M hypothetical protein NP_950784.1 599487 R 262768 CDS NP_950785.1 39939019 2673270 complement(601518..601892) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 601892 2673270 PAM_533 Onion yellows phytoplasma OY-M hypothetical protein NP_950785.1 601518 R 262768 CDS NP_950786.1 39939020 2673613 complement(602204..602536) 1 NC_005303.2 identified by sequence similarity; putative; bacterial nucleoid DNA-binding protein 602536 himA 2673613 himA Onion yellows phytoplasma OY-M bacterial nucleoid DNA-binding protein NP_950786.1 602204 R 262768 CDS NP_950787.1 39939021 2673351 complement(602609..602923) 1 NC_005303.2 identified by sequence similarity; putative; single-stranded DNA-binding protein 602923 ssb 2673351 ssb Onion yellows phytoplasma OY-M single-stranded DNA-binding protein NP_950787.1 602609 R 262768 CDS NP_950788.1 39939022 2673259 complement(602938..603624) 1 NC_005303.2 identified by sequence similarity; putative; DNA-directed RNA polymerase specialized sigma 603624 fliA 2673259 fliA Onion yellows phytoplasma OY-M DNA-directed RNA polymerase specialized sigma NP_950788.1 602938 R 262768 CDS NP_950789.1 39939023 2673271 603676..604047 1 NC_005303.2 identified by Glimmer2; hypothetical protein 604047 2673271 PAM_537 Onion yellows phytoplasma OY-M hypothetical protein NP_950789.1 603676 D 262768 CDS NP_950790.1 39939024 2673272 604274..604639 1 NC_005303.2 identified by Glimmer2; hypothetical protein 604639 2673272 PAM_538 Onion yellows phytoplasma OY-M hypothetical protein NP_950790.1 604274 D 262768 CDS NP_950791.1 39939025 2673273 604706..605437 1 NC_005303.2 identified by Glimmer2; hypothetical protein 605437 2673273 PAM_539 Onion yellows phytoplasma OY-M hypothetical protein NP_950791.1 604706 D 262768 CDS NP_950792.1 39939026 2673274 605503..605880 1 NC_005303.2 identified by Glimmer2; hypothetical protein 605880 2673274 PAM_540 Onion yellows phytoplasma OY-M hypothetical protein NP_950792.1 605503 D 262768 CDS NP_950793.1 39939027 2673275 605901..606668 1 NC_005303.2 identified by Glimmer2; hypothetical protein 606668 2673275 PAM_541 Onion yellows phytoplasma OY-M hypothetical protein NP_950793.1 605901 D 262768 CDS NP_950794.1 39939028 2673602 606915..607481 1 NC_005303.2 identified by Glimmer2; hypothetical protein 607481 2673602 PAM_542 Onion yellows phytoplasma OY-M hypothetical protein NP_950794.1 606915 D 262768 CDS NP_950795.1 39939029 2673603 608014..608664 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 608664 2673603 PAM_543 Onion yellows phytoplasma OY-M hypothetical protein NP_950795.1 608014 D 262768 CDS NP_950796.1 39939030 2673604 608739..609119 1 NC_005303.2 possible pseudogene of thymidylate kinase; identified by sequence similarity; putative; hypothetical protein 609119 2673604 PAM_544 Onion yellows phytoplasma OY-M hypothetical protein NP_950796.1 608739 D 262768 CDS NP_950797.1 39939031 2673605 610701..611198 1 NC_005303.2 possible pseudogene of replicative DNA helicase (DnaB); identified by sequence similarity; hypothetical protein 611198 2673605 PAM_545 Onion yellows phytoplasma OY-M hypothetical protein NP_950797.1 610701 D 262768 CDS NP_950798.1 39939032 2673606 611695..612171 1 NC_005303.2 possible pseudogene of DNA primase (DnaG); identified by sequence similarity; hypothetical protein 612171 2673606 PAM_546 Onion yellows phytoplasma OY-M hypothetical protein NP_950798.1 611695 D 262768 CDS NP_950799.1 39939033 2673385 complement(612792..613721) 1 NC_005303.2 identified by sequence similarity; putative; putative transposase 613721 tra5 2673385 tra5 Onion yellows phytoplasma OY-M putative transposase NP_950799.1 612792 R 262768 CDS NP_950800.1 39939034 2673607 complement(614440..614937) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 614937 2673607 PAM_548 Onion yellows phytoplasma OY-M hypothetical protein NP_950800.1 614440 R 262768 CDS NP_950801.1 39939035 2673233 complement(614937..616262) 1 NC_005303.2 identified by sequence similarity; putative; DNA primase 616262 dnaG 2673233 dnaG Onion yellows phytoplasma OY-M DNA primase NP_950801.1 614937 R 262768 CDS NP_950802.1 39939036 2673058 complement(616287..617783) 1 NC_005303.2 identified by sequence similarity; putative; replicative DNA helicase 617783 dnaB 2673058 dnaB Onion yellows phytoplasma OY-M replicative DNA helicase NP_950802.1 616287 R 262768 CDS NP_950803.1 39939037 2673608 complement(617804..618409) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 618409 2673608 PAM_551 Onion yellows phytoplasma OY-M hypothetical protein NP_950803.1 617804 R 262768 CDS NP_950804.1 39939038 2673609 complement(618799..619215) 1 NC_005303.2 possible pseudogene of thymidylate kinase; identified by sequence similarity; putative; hypothetical protein 619215 2673609 PAM_552 Onion yellows phytoplasma OY-M hypothetical protein NP_950804.1 618799 R 262768 CDS NP_950805.1 39939039 2673610 complement(619290..619652) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 619652 2673610 PAM_553 Onion yellows phytoplasma OY-M hypothetical protein NP_950805.1 619290 R 262768 CDS NP_950806.1 39939040 2673611 complement(620646..621224) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 621224 2673611 PAM_554 Onion yellows phytoplasma OY-M hypothetical protein NP_950806.1 620646 R 262768 CDS NP_950807.1 39939041 2673494 622001..622333 1 NC_005303.2 identified by Glimmer2; hypothetical protein 622333 2673494 PAM_555 Onion yellows phytoplasma OY-M hypothetical protein NP_950807.1 622001 D 262768 CDS NP_950808.1 39939042 2673495 622528..622998 1 NC_005303.2 identified by Glimmer2; hypothetical protein 622998 2673495 PAM_556 Onion yellows phytoplasma OY-M hypothetical protein NP_950808.1 622528 D 262768 CDS NP_950809.1 39939043 2673496 622961..623635 1 NC_005303.2 identified by Glimmer2; hypothetical protein 623635 2673496 PAM_557 Onion yellows phytoplasma OY-M hypothetical protein NP_950809.1 622961 D 262768 CDS NP_950810.1 39939044 2673497 623667..624746 1 NC_005303.2 identified by sequence similarity; putative; similar to DotG of Legionella pneumophila; hypothetical protein 624746 2673497 PAM_558 Onion yellows phytoplasma OY-M hypothetical protein NP_950810.1 623667 D 262768 CDS NP_950811.1 39939045 2672924 624971..627511 1 NC_005303.2 identified by sequence similarity; putative; ATP-dependent DNA helicase 627511 uvrD 2672924 uvrD Onion yellows phytoplasma OY-M ATP-dependent DNA helicase NP_950811.1 624971 D 262768 CDS NP_950812.1 39939046 2673498 627634..628083 1 NC_005303.2 identified by Glimmer2; hypothetical protein 628083 2673498 PAM_560 Onion yellows phytoplasma OY-M hypothetical protein NP_950812.1 627634 D 262768 CDS NP_950813.1 39939047 2673049 complement(628484..629596) 1 NC_005303.2 identified by sequence similarity; putative; FtsH; ATP-dependent Zn protease 629596 hflB 2673049 hflB Onion yellows phytoplasma OY-M ATP-dependent Zn protease NP_950813.1 628484 R 262768 CDS NP_950814.1 39939048 2673499 complement(629731..630261) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 630261 2673499 PAM_562 Onion yellows phytoplasma OY-M hypothetical protein NP_950814.1 629731 R 262768 CDS NP_950815.1 39939049 2673614 complement(630574..630864) 1 NC_005303.2 identified by sequence similarity; putative; bacterial nucleoid DNA-binding protein 630864 himA 2673614 himA Onion yellows phytoplasma OY-M bacterial nucleoid DNA-binding protein NP_950815.1 630574 R 262768 CDS NP_950816.1 39939050 2673574 complement(631045..631380) 1 NC_005303.2 identified by sequence similarity; putative; single-stranded DNA-binding protein 631380 ssb 2673574 ssb Onion yellows phytoplasma OY-M single-stranded DNA-binding protein NP_950816.1 631045 R 262768 CDS NP_950817.1 39939051 2673531 complement(631552..632436) 1 NC_005303.2 identified by sequence similarity; putative; site-specific DNA methylase 632436 dam 2673531 dam Onion yellows phytoplasma OY-M site-specific DNA methylase NP_950817.1 631552 R 262768 CDS NP_950818.1 39939052 2673500 complement(632760..632996) 1 NC_005303.2 possible pseudogene of DNA-directed RNA polymerase sigma subunit; identified by sequence similarity; hypothetical protein 632996 2673500 PAM_566 Onion yellows phytoplasma OY-M hypothetical protein NP_950818.1 632760 R 262768 CDS NP_950819.1 39939053 2673386 complement(634664..635593) 1 NC_005303.2 identified by sequence similarity; putative; putative transposase 635593 tra5 2673386 tra5 Onion yellows phytoplasma OY-M putative transposase NP_950819.1 634664 R 262768 CDS NP_950820.1 39939054 2673501 complement(636225..636788) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 636788 2673501 PAM_568 Onion yellows phytoplasma OY-M hypothetical protein NP_950820.1 636225 R 262768 CDS NP_950821.1 39939055 2673234 complement(636788..638113) 1 NC_005303.2 identified by sequence similarity; putative; DNA primase 638113 dnaG 2673234 dnaG Onion yellows phytoplasma OY-M DNA primase NP_950821.1 636788 R 262768 CDS NP_950822.1 39939056 2673335 complement(638138..639634) 1 NC_005303.2 identified by sequence similarity; putative; replicative DNA helicase 639634 dnaB 2673335 dnaB Onion yellows phytoplasma OY-M replicative DNA helicase NP_950822.1 638138 R 262768 CDS NP_950823.1 39939057 2673502 640160..640879 1 NC_005303.2 possible pseudogene of replicative DNA helicase (DnaB); identified by sequence similarity; hypothetical protein 640879 2673502 PAM_571 Onion yellows phytoplasma OY-M hypothetical protein NP_950823.1 640160 D 262768 CDS NP_950824.1 39939058 2673245 640891..642216 1 NC_005303.2 identified by sequence similarity; putative; DNA primase 642216 dnaG 2673245 dnaG Onion yellows phytoplasma OY-M DNA primase NP_950824.1 640891 D 262768 CDS NP_950825.1 39939059 2673503 642357..642983 1 NC_005303.2 identified by Glimmer2; hypothetical protein 642983 2673503 PAM_573 Onion yellows phytoplasma OY-M hypothetical protein NP_950825.1 642357 D 262768 CDS NP_950826.1 39939060 2673462 643423..644361 1 NC_005303.2 identified by sequence similarity; putative; putative transposase 644361 tra5 2673462 tra5 Onion yellows phytoplasma OY-M putative transposase NP_950826.1 643423 D 262768 CDS NP_950827.1 39939061 2673504 645119..645853 1 NC_005303.2 identified by Glimmer2; hypothetical protein 645853 2673504 PAM_575 Onion yellows phytoplasma OY-M hypothetical protein NP_950827.1 645119 D 262768 CDS NP_950828.1 39939062 2673433 645919..646728 1 NC_005303.2 possible pseudogene of ATP-dependent Zn proteaseHflB (FtsH); identified by sequence similarity; hypothetical protein 646728 2673433 PAM_576 Onion yellows phytoplasma OY-M hypothetical protein NP_950828.1 645919 D 262768 CDS NP_950829.1 39939063 2673434 646867..647355 1 NC_005303.2 identified by Glimmer2; hypothetical protein 647355 2673434 PAM_577 Onion yellows phytoplasma OY-M hypothetical protein NP_950829.1 646867 D 262768 CDS NP_950830.1 39939064 2673435 648148..648978 1 NC_005303.2 possible pseudogene of ATP-dependent Zn proteaseHflB (FtsH); identified by sequence similarity; hypothetical protein 648978 2673435 PAM_578 Onion yellows phytoplasma OY-M hypothetical protein NP_950830.1 648148 D 262768 CDS NP_950831.1 39939065 2673403 complement(649334..650035) 1 NC_005303.2 identified by sequence similarity; putative; glycoprotein endopeptidase 650035 QRI7 2673403 QRI7 Onion yellows phytoplasma OY-M glycoprotein endopeptidase NP_950831.1 649334 R 262768 CDS NP_950832.1 39939066 2673631 complement(650123..650638) 1 NC_005303.2 identified by sequence similarity; putative; 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 650638 folK 2673631 folK Onion yellows phytoplasma OY-M 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase NP_950832.1 650123 R 262768 CDS NP_950833.1 39939067 2673127 complement(650848..651729) 1 NC_005303.2 identified by sequence similarity; putative; dihydropteroate synthase 651729 folP 2673127 folP Onion yellows phytoplasma OY-M dihydropteroate synthase NP_950833.1 650848 R 262768 CDS NP_950834.1 39939068 2673436 complement(652100..652699) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 652699 2673436 PAM_582 Onion yellows phytoplasma OY-M hypothetical protein NP_950834.1 652100 R 262768 CDS NP_950835.1 39939069 2673532 complement(652918..653784) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 653784 degV 2673532 degV Onion yellows phytoplasma OY-M hypothetical protein NP_950835.1 652918 R 262768 CDS NP_950836.1 39939070 2673437 complement(653913..654704) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 654704 2673437 PAM_584 Onion yellows phytoplasma OY-M hypothetical protein NP_950836.1 653913 R 262768 CDS NP_950837.1 39939071 2673102 complement(654894..657572) 1 NC_005303.2 identified by sequence similarity; putative; cation transport ATPase 657572 mgtA 2673102 mgtA Onion yellows phytoplasma OY-M cation transport ATPase NP_950837.1 654894 R 262768 CDS NP_950838.1 39939072 2673043 complement(657945..658394) 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S4 and related protein 658394 rpsD 2673043 rpsD Onion yellows phytoplasma OY-M ribosomal protein S4 and related protein NP_950838.1 657945 R 262768 CDS NP_950839.1 39939073 2673438 659141..659554 1 NC_005303.2 identified by Glimmer2; hypothetical protein 659554 2673438 PAM_587 Onion yellows phytoplasma OY-M hypothetical protein NP_950839.1 659141 D 262768 CDS NP_950840.1 39939074 2673586 complement(659720..661450) 1 NC_005303.2 identified by sequence similarity; putative; ABC-type amino acid transport system, permease 661450 artM 2673586 artM Onion yellows phytoplasma OY-M ABC-type amino acid transport system, permease NP_950840.1 659720 R 262768 CDS NP_950841.1 39939075 2673060 663083..664618 1 NC_005303.2 identified by sequence similarity; putative; lysyl-tRNA synthetase class II 664618 lysU 2673060 lysU Onion yellows phytoplasma OY-M lysyl-tRNA synthetase class II NP_950841.1 663083 D 262768 CDS NP_950842.1 39939076 2673439 665045..665407 1 NC_005303.2 identified by Glimmer2; hypothetical protein 665407 2673439 PAM_590 Onion yellows phytoplasma OY-M hypothetical protein NP_950842.1 665045 D 262768 CDS NP_950843.1 39939077 2673222 665511..667388 1 NC_005303.2 identified by sequence similarity; putative; DNA polymerase III alpha subunit 667388 dnaE 2673222 dnaE Onion yellows phytoplasma OY-M DNA polymerase III alpha subunit NP_950843.1 665511 D 262768 CDS NP_950844.1 39939078 2673440 668644..669240 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 669240 2673440 PAM_592 Onion yellows phytoplasma OY-M hypothetical protein NP_950844.1 668644 D 262768 CDS NP_950845.1 39939079 2673441 669354..670133 1 NC_005303.2 identified by sequence similarity; putative; predicted hydrolases of the HAD superfamily; hypothetical protein 670133 2673441 PAM_593 Onion yellows phytoplasma OY-M hypothetical protein NP_950845.1 669354 D 262768 CDS NP_950846.1 39939080 2673530 670192..671868 1 NC_005303.2 identified by sequence similarity; putative; asparagine synthase 671868 asnB 2673530 asnB Onion yellows phytoplasma OY-M asparagine synthase NP_950846.1 670192 D 262768 CDS NP_950847.1 39939081 2673442 672072..672425 1 NC_005303.2 identified by Glimmer2; hypothetical protein 672425 2673442 PAM_595 Onion yellows phytoplasma OY-M hypothetical protein NP_950847.1 672072 D 262768 CDS NP_950848.1 39939082 2673020 672491..673525 1 NC_005303.2 identified by sequence similarity; putative; phenylalanyl-tRNA synthetase alpha subunit 673525 pheS 2673020 pheS Onion yellows phytoplasma OY-M phenylalanyl-tRNA synthetase alpha subunit NP_950848.1 672491 D 262768 CDS NP_950849.1 39939083 2673443 673491..674036 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 674036 2673443 PAM_597 Onion yellows phytoplasma OY-M hypothetical protein NP_950849.1 673491 D 262768 CDS NP_950850.1 39939084 2673021 674029..675957 1 NC_005303.2 identified by sequence similarity; putative; phenylalanyl-tRNA synthetase beta subunit 675957 pheT 2673021 pheT Onion yellows phytoplasma OY-M phenylalanyl-tRNA synthetase beta subunit NP_950850.1 674029 D 262768 CDS NP_950851.1 39939085 2673023 676146..677774 1 NC_005303.2 identified by sequence similarity; putative; ABC transporter, ATPase component 677774 phnL 2673023 phnL Onion yellows phytoplasma OY-M ABC transporter, ATPase component NP_950851.1 676146 D 262768 CDS NP_950852.1 39939086 2673432 677998..679089 1 NC_005303.2 identified by sequence similarity; putative; thiamine pyrophosphate-dependent dehydrogenase, E1 component alpha subunit 679089 acoA 2673432 acoA Onion yellows phytoplasma OY-M thiamine pyrophosphate-dependent dehydrogenase, E1 component alpha subunit NP_950852.1 677998 D 262768 CDS NP_950853.1 39939087 2673135 679092..680066 1 NC_005303.2 identified by sequence similarity; putative; thiamine pyrophosphate-dependent dehydrogenase, E1 component beta subunit 680066 acoB 2673135 acoB Onion yellows phytoplasma OY-M thiamine pyrophosphate-dependent dehydrogenase, E1 component beta subunit NP_950853.1 679092 D 262768 CDS NP_950854.1 39939088 2673126 680390..681574 1 NC_005303.2 identified by sequence similarity; putative; dihydrolipoamide acyltransferase 681574 aceF 2673126 aceF Onion yellows phytoplasma OY-M dihydrolipoamide acyltransferase NP_950854.1 680390 D 262768 CDS NP_950855.1 39939089 2673377 681596..682969 1 NC_005303.2 identified by sequence similarity; putative; fatty acid/phospholipid biosynthesis enzyme 682969 lpd 2673377 lpd Onion yellows phytoplasma OY-M fatty acid/phospholipid biosynthesis enzyme NP_950855.1 681596 D 262768 CDS NP_950856.1 39939090 2673535 683338..683694 1 NC_005303.2 identified by Glimmer2; hypothetical protein 683694 2673535 PAM_604 Onion yellows phytoplasma OY-M hypothetical protein NP_950856.1 683338 D 262768 CDS NP_950857.1 39939091 2673578 684032..684799 1 NC_005303.2 identified by sequence similarity; putative; Mg-dependent DNase 684799 tatD 2673578 tatD Onion yellows phytoplasma OY-M Mg-dependent DNase NP_950857.1 684032 D 262768 CDS NP_950858.1 39939092 2673536 complement(684894..685229) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 685229 2673536 PAM_606 Onion yellows phytoplasma OY-M hypothetical protein NP_950858.1 684894 R 262768 CDS NP_950859.1 39939093 2673025 685905..687005 1 NC_005303.2 identified by sequence similarity; putative; fatty acid/phospholipid biosynthesis enzyme 687005 plsX 2673025 plsX Onion yellows phytoplasma OY-M fatty acid/phospholipid biosynthesis enzyme NP_950859.1 685905 D 262768 CDS NP_950860.1 39939094 2673408 687002..687718 1 NC_005303.2 identified by sequence similarity; putative; dsRNA-specific ribonuclease 687718 rnc 2673408 rnc Onion yellows phytoplasma OY-M dsRNA-specific ribonuclease NP_950860.1 687002 D 262768 CDS NP_950861.1 39939095 2673537 687660..688343 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 688343 2673537 PAM_609 Onion yellows phytoplasma OY-M hypothetical protein NP_950861.1 687660 D 262768 CDS NP_950862.1 39939096 2673538 688470..688937 1 NC_005303.2 identified by Glimmer2; hypothetical protein 688937 2673538 PAM_610 Onion yellows phytoplasma OY-M hypothetical protein NP_950862.1 688470 D 262768 CDS NP_950863.1 39939097 2673401 complement(689018..690640) 1 NC_005303.2 identified by sequence similarity; putative; CTP synthase 690640 pyrG 2673401 pyrG Onion yellows phytoplasma OY-M CTP synthase NP_950863.1 689018 R 262768 CDS NP_950864.1 39939098 2673115 complement(690633..691631) 1 NC_005303.2 identified by sequence similarity; putative; phosphatidylserine decarboxylase 691631 psd 2673115 psd Onion yellows phytoplasma OY-M phosphatidylserine decarboxylase NP_950864.1 690633 R 262768 CDS NP_950865.1 39939099 2673398 complement(691644..692378) 1 NC_005303.2 identified by sequence similarity; putative; phosphatidylserine synthase 692378 pssA 2673398 pssA Onion yellows phytoplasma OY-M phosphatidylserine synthase NP_950865.1 691644 R 262768 CDS NP_950866.1 39939100 2673539 complement(692554..693063) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 693063 2673539 PAM_614 Onion yellows phytoplasma OY-M hypothetical protein NP_950866.1 692554 R 262768 CDS NP_950867.1 39939101 2673540 complement(693264..693473) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 693473 2673540 PAM_615 Onion yellows phytoplasma OY-M hypothetical protein NP_950867.1 693264 R 262768 CDS NP_950868.1 39939102 2673541 complement(693486..693980) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 693980 2673541 PAM_616 Onion yellows phytoplasma OY-M hypothetical protein NP_950868.1 693486 R 262768 CDS NP_950869.1 39939103 2673276 complement(693977..695425) 1 NC_005303.2 identified by sequence similarity; putative; DNA polymerase III, gamma/tau subunit 695425 dnaX 2673276 dnaX Onion yellows phytoplasma OY-M DNA polymerase III, gamma/tau subunit NP_950869.1 693977 R 262768 CDS NP_950870.1 39939104 2673146 697333..697932 1 NC_005303.2 identified by sequence similarity; putative; restriction enzymes type I helicase subunit 697932 hsdR 2673146 hsdR Onion yellows phytoplasma OY-M restriction enzymes type I helicase subunit NP_950870.1 697333 D 262768 CDS NP_950871.1 39939105 2673145 699943..700311 1 NC_005303.2 identified by sequence similarity; putative; type I restriction-modification system methyltransferase subunit 700311 hsdM 2673145 hsdM Onion yellows phytoplasma OY-M type I restriction-modification system methyltransferase subunit NP_950871.1 699943 D 262768 CDS NP_950872.3 380343411 2673034 701859..703673 1 NC_005303.2 identified by sequence similarity; putative; glutamyl- and glutaminyl-tRNA synthetase 703673 glnS 2673034 glnS Onion yellows phytoplasma OY-M glutamyl- and glutaminyl-tRNA synthetase NP_950872.3 701859 D 262768 CDS NP_950873.1 39939107 2672925 703793..706036 1 NC_005303.2 identified by sequence similarity; putative; ATP-dependent DNA helicase 706036 uvrD 2672925 uvrD Onion yellows phytoplasma OY-M ATP-dependent DNA helicase NP_950873.1 703793 D 262768 CDS NP_950874.1 39939108 2673542 706378..706956 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 706956 2673542 PAM_622 Onion yellows phytoplasma OY-M hypothetical protein NP_950874.1 706378 D 262768 CDS NP_950875.1 39939109 2673410 707185..707358 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein S21 707358 rpsU 2673410 rpsU Onion yellows phytoplasma OY-M ribosomal protein S21 NP_950875.1 707185 D 262768 CDS NP_950876.1 39939110 2673543 707580..708020 1 NC_005303.2 identified by sequence similarity; putative; predicted metal-dependent hydrolase; hypothetical protein 708020 2673543 PAM_624 Onion yellows phytoplasma OY-M hypothetical protein NP_950876.1 707580 D 262768 CDS NP_950877.1 39939111 2673599 708144..709031 1 NC_005303.2 identified by sequence similarity; putative; glycyl-tRNA synthetase 709031 era 2673599 era Onion yellows phytoplasma OY-M glycyl-tRNA synthetase NP_950877.1 708144 D 262768 CDS NP_950878.1 39939112 2672907 709131..710489 1 NC_005303.2 identified by sequence similarity; putative; glycyl-tRNA synthetase, class II 710489 GRS1 2672907 GRS1 Onion yellows phytoplasma OY-M glycyl-tRNA synthetase, class II NP_950878.1 709131 D 262768 CDS NP_950879.1 39939113 2673232 710499..712313 1 NC_005303.2 identified by sequence similarity; putative; DNA primase 712313 dnaG 2673232 dnaG Onion yellows phytoplasma OY-M DNA primase NP_950879.1 710499 D 262768 CDS NP_950880.1 39939114 2673038 712396..713778 1 NC_005303.2 identified by sequence similarity; putative; DNA-directed RNA polymerase sigma subunit 713778 rpoD 2673038 rpoD Onion yellows phytoplasma OY-M DNA-directed RNA polymerase sigma subunit NP_950880.1 712396 D 262768 CDS NP_950881.1 39939115 2673544 713780..714223 1 NC_005303.2 identified by sequence similarity; putative; predicted SAM-dependent methyltransferase; hypothetical protein 714223 2673544 PAM_629 Onion yellows phytoplasma OY-M hypothetical protein NP_950881.1 713780 D 262768 CDS NP_950882.1 39939116 2673325 complement(714497..714958) 1 NC_005303.2 identified by sequence similarity; putative; diadenosine tetraphosphate hydrolase 714958 hit 2673325 hit Onion yellows phytoplasma OY-M diadenosine tetraphosphate hydrolase NP_950882.1 714497 R 262768 CDS NP_950883.1 39939117 2673545 complement(714980..715972) 1 NC_005303.2 identified by sequence similarity; putative; ribonuclease HII Family 2 715972 2673545 PAM_631 Onion yellows phytoplasma OY-M ribonuclease HII Family 2 NP_950883.1 714980 R 262768 CDS NP_950884.1 39939118 2673677 complement(716524..716829) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 716829 2673677 PAM_632 Onion yellows phytoplasma OY-M hypothetical protein NP_950884.1 716524 R 262768 CDS NP_950885.1 39939119 2673678 complement(717468..719159) 1 NC_005303.2 identified by sequence similarity; putative; predicted hydrolase of the metallo-beta-lactamase; hypothetical protein 719159 2673678 PAM_633 Onion yellows phytoplasma OY-M hypothetical protein NP_950885.1 717468 R 262768 CDS NP_950886.1 39939120 2673679 719352..720158 1 NC_005303.2 identified by sequence similarity; putative; predicted hydrolases of the HAD superfamily; hypothetical protein 720158 2673679 PAM_634 Onion yellows phytoplasma OY-M hypothetical protein NP_950886.1 719352 D 262768 CDS NP_950888.1 39939122 2673624 complement(720990..721853) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 721853 degV 2673624 degV Onion yellows phytoplasma OY-M hypothetical protein NP_950888.1 720990 R 262768 CDS NP_950889.1 39939123 2673681 complement(722189..723913) 1 NC_005303.2 identified by sequence similarity; putative; predicted hydrolase of the metallo-beta-lactamase; hypothetical protein 723913 2673681 PAM_637 Onion yellows phytoplasma OY-M hypothetical protein NP_950889.1 722189 R 262768 CDS NP_950890.1 39939124 2673682 724006..724125 1 NC_005303.2 identified by Glimmer2; hypothetical protein 724125 2673682 PAM_638 Onion yellows phytoplasma OY-M hypothetical protein NP_950890.1 724006 D 262768 CDS NP_950891.1 39939125 2673063 complement(725171..725929) 1 NC_005303.2 identified by sequence similarity; putative; ABC-type amino acid transport system, permease 725929 artM 2673063 artM Onion yellows phytoplasma OY-M ABC-type amino acid transport system, permease NP_950891.1 725171 R 262768 CDS NP_950892.1 39939126 2673683 complement(726242..727045) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 727045 2673683 PAM_640 Onion yellows phytoplasma OY-M hypothetical protein NP_950892.1 726242 R 262768 CDS NP_950893.1 39939127 2673155 complement(727017..727391) 1 NC_005303.2 identified by sequence similarity; putative; amino acid transporter, amino acid-binding 727391 mdoB 2673155 mdoB Onion yellows phytoplasma OY-M amino acid transporter, amino acid-binding NP_950893.1 727017 R 262768 CDS NP_950894.1 39939128 2673387 complement(727774..728712) 1 NC_005303.2 identified by sequence similarity; putative; putative transposase 728712 tra5 2673387 tra5 Onion yellows phytoplasma OY-M putative transposase NP_950894.1 727774 R 262768 CDS NP_950895.1 39939129 2673684 complement(729127..729507) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 729507 2673684 PAM_643 Onion yellows phytoplasma OY-M hypothetical protein NP_950895.1 729127 R 262768 CDS NP_950896.1 39939130 2673133 complement(729934..731166) 1 NC_005303.2 identified by sequence similarity; putative; DNA primase 731166 dnaG 2673133 dnaG Onion yellows phytoplasma OY-M DNA primase NP_950896.1 729934 R 262768 CDS NP_950897.1 39939131 2673238 complement(731179..732672) 1 NC_005303.2 identified by sequence similarity; putative; replicative DNA helicase 732672 dnaB 2673238 dnaB Onion yellows phytoplasma OY-M replicative DNA helicase NP_950897.1 731179 R 262768 CDS NP_950898.1 39939132 2673685 complement(732674..733297) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 733297 2673685 PAM_646 Onion yellows phytoplasma OY-M hypothetical protein NP_950898.1 732674 R 262768 CDS NP_950899.1 39939133 2672898 complement(733717..734097) 1 NC_005303.2 possible pseudogene of thymidylate kinase; identified by sequence similarity; putative; hypothetical protein 734097 2672898 PAM_647 Onion yellows phytoplasma OY-M hypothetical protein NP_950899.1 733717 R 262768 CDS NP_950900.1 39939134 2673511 complement(734168..734806) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 734806 2673511 PAM_648 Onion yellows phytoplasma OY-M hypothetical protein NP_950900.1 734168 R 262768 CDS NP_950901.1 39939135 2673512 complement(735580..735855) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 735855 2673512 PAM_649 Onion yellows phytoplasma OY-M hypothetical protein NP_950901.1 735580 R 262768 CDS NP_950902.1 39939136 2673513 complement(735947..736642) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 736642 2673513 PAM_650 Onion yellows phytoplasma OY-M hypothetical protein NP_950902.1 735947 R 262768 CDS NP_950903.1 39939137 2673514 complement(736709..737332) 1 NC_005303.2 identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum; hypothetical protein 737332 2673514 PAM_651 Onion yellows phytoplasma OY-M hypothetical protein NP_950903.1 736709 R 262768 CDS NP_950904.1 39939138 2673515 complement(737802..738662) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 738662 2673515 PAM_652 Onion yellows phytoplasma OY-M hypothetical protein NP_950904.1 737802 R 262768 CDS NP_950905.1 39939139 2673516 complement(739442..741295) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 741295 2673516 PAM_653 Onion yellows phytoplasma OY-M hypothetical protein NP_950905.1 739442 R 262768 CDS NP_950906.1 39939140 2673615 complement(741367..741657) 1 NC_005303.2 identified by sequence similarity; putative; bacterial nucleoid DNA-binding protein 741657 himA 2673615 himA Onion yellows phytoplasma OY-M bacterial nucleoid DNA-binding protein NP_950906.1 741367 R 262768 CDS NP_950907.1 39939141 2673575 complement(741787..742131) 1 NC_005303.2 identified by sequence similarity; putative; single-stranded DNA-binding protein 742131 ssb 2673575 ssb Onion yellows phytoplasma OY-M single-stranded DNA-binding protein NP_950907.1 741787 R 262768 CDS NP_950908.1 39939142 2673260 complement(742394..742996) 1 NC_005303.2 identified by sequence similarity; putative; DNA-directed RNA polymerase specialized sigma 742996 fliA 2673260 fliA Onion yellows phytoplasma OY-M DNA-directed RNA polymerase specialized sigma NP_950908.1 742394 R 262768 CDS NP_950909.1 39939143 2673517 complement(743087..743401) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 743401 2673517 PAM_657 Onion yellows phytoplasma OY-M hypothetical protein NP_950909.1 743087 R 262768 CDS NP_950910.1 39939144 2673050 complement(744430..746226) 1 NC_005303.2 identified by sequence similarity; putative; FtsH; ATP-dependent Zn protease 746226 hflB 2673050 hflB Onion yellows phytoplasma OY-M ATP-dependent Zn protease NP_950910.1 744430 R 262768 CDS NP_950911.1 39939145 2673105 746888..748141 1 NC_005303.2 identified by sequence similarity; putative; ABC-type spermidine/putrescine transport systems, ATPase component 748141 potA 2673105 potA Onion yellows phytoplasma OY-M ABC-type spermidine/putrescine transport systems, ATPase component NP_950911.1 746888 D 262768 CDS NP_950912.1 39939146 2673106 748135..748983 1 NC_005303.2 identified by sequence similarity; putative; ABC-type spermidine/putrescine transport system, permease component I 748983 potB 2673106 potB Onion yellows phytoplasma OY-M ABC-type spermidine/putrescine transport system, permease component I NP_950912.1 748135 D 262768 CDS NP_950913.1 39939147 2673107 748973..749977 1 NC_005303.2 identified by sequence similarity; putative; ABC-type spermidine/putrescine transport system, permease component II 749977 potC 2673107 potC Onion yellows phytoplasma OY-M ABC-type spermidine/putrescine transport system, permease component II NP_950913.1 748973 D 262768 CDS NP_950914.1 39939148 2673108 749974..751200 1 NC_005303.2 identified by sequence similarity; putative; spermidine/putrescine-binding periplasmic 751200 potD 2673108 potD Onion yellows phytoplasma OY-M spermidine/putrescine-binding periplasmic NP_950914.1 749974 D 262768 CDS NP_950915.1 39939149 2673518 complement(751396..752409) 1 NC_005303.2 identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum; hypothetical protein 752409 2673518 PAM_663 Onion yellows phytoplasma OY-M hypothetical protein NP_950915.1 751396 R 262768 CDS NP_950916.1 39939150 2673411 complement(752869..753312) 1 NC_005303.2 identified by sequence similarity; putative; ATP-dependent 26S proteasome regulatory subunit 753312 rpt1 2673411 rpt1 Onion yellows phytoplasma OY-M ATP-dependent 26S proteasome regulatory subunit NP_950916.1 752869 R 262768 CDS NP_950917.1 39939151 2673519 754207..755922 1 NC_005303.2 identified by sequence similarity; putative; predicted kinase related to dihydroxyacetone kinase; hypothetical protein 755922 2673519 PAM_665 Onion yellows phytoplasma OY-M hypothetical protein NP_950917.1 754207 D 262768 CDS NP_950918.1 39939152 2673388 complement(756675..757625) 1 NC_005303.2 identified by sequence similarity; putative; putative transposase 757625 tra5 2673388 tra5 Onion yellows phytoplasma OY-M putative transposase NP_950918.1 756675 R 262768 CDS NP_950919.1 39939153 2672954 758197..759327 1 NC_005303.2 identified by sequence similarity; putative; ATP-dependent protease Clp, ATPase subunit 759327 clpX 2672954 clpX Onion yellows phytoplasma OY-M ATP-dependent protease Clp, ATPase subunit NP_950919.1 758197 D 262768 CDS NP_950920.1 39939154 2673520 759351..759710 1 NC_005303.2 identified by Glimmer2; hypothetical protein 759710 2673520 PAM_668 Onion yellows phytoplasma OY-M hypothetical protein NP_950920.1 759351 D 262768 CDS NP_950921.1 39939155 2673521 complement(759809..760351) 1 NC_005303.2 identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum; hypothetical protein 760351 2673521 PAM_669 Onion yellows phytoplasma OY-M hypothetical protein NP_950921.1 759809 R 262768 CDS NP_950922.1 39939156 2673075 complement(760415..760816) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 760816 2673075 PAM_670 Onion yellows phytoplasma OY-M hypothetical protein NP_950922.1 760415 R 262768 CDS NP_950923.1 39939157 2673098 761965..762189 1 NC_005303.2 identified by sequence similarity; putative; cold shock protein 762189 cspC 2673098 cspC Onion yellows phytoplasma OY-M cold shock protein NP_950923.1 761965 D 262768 CDS NP_950924.1 39939158 2673397 complement(762974..763792) 1 NC_005303.2 identified by sequence similarity; putative; DNA replication protein 763792 dnaC 2673397 dnaC Onion yellows phytoplasma OY-M DNA replication protein NP_950924.1 762974 R 262768 CDS NP_950925.1 39939159 2673239 complement(763875..765068) 1 NC_005303.2 identified by sequence similarity; putative; replication initiation/membrane attachment 765068 dnaB 2673239 dnaB Onion yellows phytoplasma OY-M replication initiation/membrane attachment NP_950925.1 763875 R 262768 CDS NP_950926.1 39939160 2673528 complement(765122..765952) 1 NC_005303.2 identified by sequence similarity; putative; formamidopyrimidine-DNA glycosylase 765952 nei 2673528 nei Onion yellows phytoplasma OY-M formamidopyrimidine-DNA glycosylase NP_950926.1 765122 R 262768 CDS NP_950927.1 39939161 2673027 complement(766108..767550) 1 NC_005303.2 identified by sequence similarity; putative; DNA polymerase I 767550 polA 2673027 polA Onion yellows phytoplasma OY-M DNA polymerase I NP_950927.1 766108 R 262768 CDS NP_950928.1 39939162 2673142 complement(767726..768694) 1 NC_005303.2 identified by sequence similarity; putative; 5'-3' exonuclease 768694 exo 2673142 exo Onion yellows phytoplasma OY-M 5'-3' exonuclease NP_950928.1 767726 R 262768 CDS NP_950929.1 39939163 2673076 complement(768802..769857) 1 NC_005303.2 identified by sequence similarity; putative; ATPases of the AAA+ class; hypothetical protein 769857 2673076 PAM_677 Onion yellows phytoplasma OY-M hypothetical protein NP_950929.1 768802 R 262768 CDS NP_950930.1 39939164 2673452 complement(770094..771374) 1 NC_005303.2 identified by sequence similarity; putative; signal recognition particle GTPase 771374 ffh 2673452 ffh Onion yellows phytoplasma OY-M signal recognition particle GTPase NP_950930.1 770094 R 262768 CDS NP_950931.1 39939165 2673031 complement(771636..772679) 1 NC_005303.2 identified by sequence similarity; putative; signal recognition particle-docking protein 772679 ftsY 2673031 ftsY Onion yellows phytoplasma OY-M signal recognition particle-docking protein NP_950931.1 771636 R 262768 CDS NP_950932.1 39939166 2672953 complement(773018..773539) 1 NC_005303.2 identified by sequence similarity; putative; guanylate kinase 773539 gmk 2672953 gmk Onion yellows phytoplasma OY-M guanylate kinase NP_950932.1 773018 R 262768 CDS NP_950933.1 39939167 2673077 complement(773877..774095) 1 NC_005303.2 possible pseudogene of transposase (Tra5); identified by sequence similarity; hypothetical protein 774095 2673077 PAM_681 Onion yellows phytoplasma OY-M hypothetical protein NP_950933.1 773877 R 262768 CDS NP_950934.1 39939168 2673078 complement(774814..775392) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 775392 2673078 PAM_682 Onion yellows phytoplasma OY-M hypothetical protein NP_950934.1 774814 R 262768 CDS NP_950935.1 39939169 2673463 775705..776652 1 NC_005303.2 identified by sequence similarity; putative; putative transposase 776652 tra5 2673463 tra5 Onion yellows phytoplasma OY-M putative transposase NP_950935.1 775705 D 262768 CDS NP_950936.1 39939170 2673079 complement(777057..777686) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 777686 2673079 PAM_684 Onion yellows phytoplasma OY-M hypothetical protein NP_950936.1 777057 R 262768 CDS NP_950937.1 39939171 2673478 complement(777846..779171) 1 NC_005303.2 identified by sequence similarity; putative; DNA primase 779171 dnaG 2673478 dnaG Onion yellows phytoplasma OY-M DNA primase NP_950937.1 777846 R 262768 CDS NP_950938.1 39939172 2673396 complement(779198..780697) 1 NC_005303.2 identified by sequence similarity; putative; replicative DNA helicase 780697 dnaB 2673396 dnaB Onion yellows phytoplasma OY-M replicative DNA helicase NP_950938.1 779198 R 262768 CDS NP_950939.1 39939173 2672895 complement(780715..781326) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 781326 2672895 PAM_687 Onion yellows phytoplasma OY-M hypothetical protein NP_950939.1 780715 R 262768 CDS NP_950940.1 39939174 2673459 complement(781491..782120) 1 NC_005303.2 identified by sequence similarity; putative; thymidylate kinase 782120 tmk 2673459 tmk Onion yellows phytoplasma OY-M thymidylate kinase NP_950940.1 781491 R 262768 CDS NP_950941.1 39939175 2673357 complement(782165..782479) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 782479 2673357 PAM_689 Onion yellows phytoplasma OY-M hypothetical protein NP_950941.1 782165 R 262768 CDS NP_950942.1 39939176 2673358 complement(782918..783181) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 783181 2673358 PAM_690 Onion yellows phytoplasma OY-M hypothetical protein NP_950942.1 782918 R 262768 CDS NP_950943.1 39939177 2673359 complement(783211..784008) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 784008 2673359 PAM_691 Onion yellows phytoplasma OY-M hypothetical protein NP_950943.1 783211 R 262768 CDS NP_950944.1 39939178 2673360 complement(784089..785780) 1 NC_005303.2 identified by sequence similarity; putative; similar to hypothetical protein of Plasmodium falciparum; hypothetical protein 785780 2673360 PAM_692 Onion yellows phytoplasma OY-M hypothetical protein NP_950944.1 784089 R 262768 CDS NP_950945.1 39939179 2673316 complement(785752..786582) 1 NC_005303.2 identified by sequence similarity; putative; chromosome segregation ATPase 786582 smc 2673316 smc Onion yellows phytoplasma OY-M chromosome segregation ATPase NP_950945.1 785752 R 262768 CDS NP_950946.1 39939180 2673361 complement(786515..787456) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 787456 2673361 PAM_694 Onion yellows phytoplasma OY-M hypothetical protein NP_950946.1 786515 R 262768 CDS NP_950947.1 39939181 2673220 complement(787477..788985) 1 NC_005303.2 identified by sequence similarity; putative; FtsH; ATP-dependent Zn protease 788985 hflB 2673220 hflB Onion yellows phytoplasma OY-M ATP-dependent Zn protease NP_950947.1 787477 R 262768 CDS NP_950948.1 39939182 2673562 complement(789226..789624) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 789624 2673562 PAM_696 Onion yellows phytoplasma OY-M hypothetical protein NP_950948.1 789226 R 262768 CDS NP_950949.1 39939183 2673563 complement(789973..790416) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 790416 2673563 PAM_697 Onion yellows phytoplasma OY-M hypothetical protein NP_950949.1 789973 R 262768 CDS NP_950950.1 39939184 2673627 complement(790728..791060) 1 NC_005303.2 identified by sequence similarity; putative; bacterial nucleoid DNA-binding protein 791060 himA 2673627 himA Onion yellows phytoplasma OY-M bacterial nucleoid DNA-binding protein NP_950950.1 790728 R 262768 CDS NP_950951.1 39939185 2673576 complement(791133..791447) 1 NC_005303.2 identified by sequence similarity; putative; single-stranded DNA-binding protein 791447 ssb 2673576 ssb Onion yellows phytoplasma OY-M single-stranded DNA-binding protein NP_950951.1 791133 R 262768 CDS NP_950952.1 39939186 2673635 complement(791462..792148) 1 NC_005303.2 identified by sequence similarity; putative; DNA-directed RNA polymerase specialized sigma 792148 fliA 2673635 fliA Onion yellows phytoplasma OY-M DNA-directed RNA polymerase specialized sigma NP_950952.1 791462 R 262768 CDS NP_950953.1 39939187 2673564 complement(792359..792595) 1 NC_005303.2 possible pseudogene of single-stranded DNA-binding protein (ssb); identified by sequence similarity; hypothetical protein 792595 2673564 PAM_701 Onion yellows phytoplasma OY-M hypothetical protein NP_950953.1 792359 R 262768 CDS NP_950954.1 39939188 2673039 complement(792597..793223) 1 NC_005303.2 identified by sequence similarity; putative; DNA-directed RNA polymerase sigma subunit 793223 rpoD 2673039 rpoD Onion yellows phytoplasma OY-M DNA-directed RNA polymerase sigma subunit NP_950954.1 792597 R 262768 CDS NP_950955.1 39939189 2673479 complement(794434..795207) 1 NC_005303.2 identified by sequence similarity; putative; molecular chaperone DnaJ 795207 dnaJ 2673479 dnaJ Onion yellows phytoplasma OY-M molecular chaperone DnaJ NP_950955.1 794434 R 262768 CDS NP_950956.1 39939190 2673480 complement(795359..797224) 1 NC_005303.2 identified by sequence similarity; putative; molecular chaperone DnaK 797224 dnaK 2673480 dnaK Onion yellows phytoplasma OY-M molecular chaperone DnaK NP_950956.1 795359 R 262768 CDS NP_950957.1 39939191 2673056 complement(797190..797933) 1 NC_005303.2 identified by sequence similarity; putative; molecular chaperone GrpE 797933 grpE 2673056 grpE Onion yellows phytoplasma OY-M molecular chaperone GrpE NP_950957.1 797190 R 262768 CDS NP_950958.1 39939192 2673144 complement(798155..799183) 1 NC_005303.2 identified by sequence similarity; putative; heat-inducible transcription repressor 799183 hrcA 2673144 hrcA Onion yellows phytoplasma OY-M heat-inducible transcription repressor NP_950958.1 798155 R 262768 CDS NP_950959.1 39939193 2673565 800947..801594 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 801594 2673565 PAM_707 Onion yellows phytoplasma OY-M hypothetical protein NP_950959.1 800947 D 262768 CDS NP_950960.1 39939194 2673566 801872..802084 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 802084 2673566 PAM_708 Onion yellows phytoplasma OY-M hypothetical protein NP_950960.1 801872 D 262768 CDS NP_950961.1 39939195 2673567 802724..802924 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 802924 2673567 PAM_709 Onion yellows phytoplasma OY-M hypothetical protein NP_950961.1 802724 D 262768 CDS NP_950962.1 39939196 2673568 802998..803438 1 NC_005303.2 identified by Glimmer2; hypothetical protein 803438 2673568 PAM_710 Onion yellows phytoplasma OY-M hypothetical protein NP_950962.1 802998 D 262768 CDS NP_950963.1 39939197 2673569 803705..804298 1 NC_005303.2 identified by Glimmer2; hypothetical protein 804298 2673569 PAM_711 Onion yellows phytoplasma OY-M hypothetical protein NP_950963.1 803705 D 262768 CDS NP_950964.1 39939198 2673570 804382..804960 1 NC_005303.2 identified by Glimmer2; hypothetical protein 804960 2673570 PAM_712 Onion yellows phytoplasma OY-M hypothetical protein NP_950964.1 804382 D 262768 CDS NP_950965.1 39939199 2673149 805183..806277 1 NC_005303.2 identified by sequence similarity; putative; FtsH; ATP-dependent Zn protease 806277 hflB 2673149 hflB Onion yellows phytoplasma OY-M ATP-dependent Zn protease NP_950965.1 805183 D 262768 CDS NP_950966.1 39939200 2673323 806944..808602 1 NC_005303.2 identified by sequence similarity; putative; superfamily II DNA and RNA helicase 808602 srmB 2673323 srmB Onion yellows phytoplasma OY-M superfamily II DNA and RNA helicase NP_950966.1 806944 D 262768 CDS NP_950967.1 39939201 2673571 complement(808734..808919) 1 NC_005303.2 possible pseudogene of RecA/RadA recombinase; identified by sequence similarity; putative; hypothetical protein 808919 2673571 PAM_715 Onion yellows phytoplasma OY-M hypothetical protein NP_950967.1 808734 R 262768 CDS NP_950968.1 39939202 2673572 complement(809043..809309) 1 NC_005303.2 possible pseudogene of RecA/RadA recombinase; identified by sequence similarity; putative; hypothetical protein 809309 2673572 PAM_716 Onion yellows phytoplasma OY-M hypothetical protein NP_950968.1 809043 R 262768 CDS NP_950969.1 39939203 2673286 complement(809376..809729) 1 NC_005303.2 possible pseudogene of RecA/RadA recombinase; identified by sequence similarity; putative; hypothetical protein 809729 2673286 PAM_717 Onion yellows phytoplasma OY-M hypothetical protein NP_950969.1 809376 R 262768 CDS NP_950970.1 39939204 2673287 complement(809984..810643) 1 NC_005303.2 identified by sequence similarity; putative; phosphatidylglycerophosphate synthase 810643 2673287 PAM_718 Onion yellows phytoplasma OY-M phosphatidylglycerophosphate synthase NP_950970.1 809984 R 262768 CDS NP_950971.1 39939205 2673288 complement(810624..810779) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 810779 2673288 PAM_719 Onion yellows phytoplasma OY-M hypothetical protein NP_950971.1 810624 R 262768 CDS NP_950972.1 39939206 2673589 complement(811261..812376) 1 NC_005303.2 identified by sequence similarity; putative; malate/citrate symporter 812376 citS 2673589 citS Onion yellows phytoplasma OY-M malate/citrate symporter NP_950972.1 811261 R 262768 CDS NP_950973.1 39939207 2673420 complement(812795..813967) 1 NC_005303.2 identified by sequence similarity; putative; malic enzyme 813967 sfcA 2673420 sfcA Onion yellows phytoplasma OY-M malic enzyme NP_950973.1 812795 R 262768 CDS NP_950974.1 39939208 2673289 814527..814697 1 NC_005303.2 possible pseudogene of DNA primase (DnaG); identified by sequence similarity; hypothetical protein 814697 2673289 PAM_722 Onion yellows phytoplasma OY-M hypothetical protein NP_950974.1 814527 D 262768 CDS NP_950975.1 39939209 2673290 complement(814922..816133) 1 NC_005303.2 possible pseudogene of sucrose phosphorylase (AmyA); identified by sequence similarity; putative; hypothetical protein 816133 2673290 PAM_723 Onion yellows phytoplasma OY-M hypothetical protein NP_950975.1 814922 R 262768 CDS NP_950976.1 39939210 2673291 complement(816154..816372) 1 NC_005303.2 possible pseudogene of sucrose phosphorylase (AmyA); identified by sequence similarity; putative; hypothetical protein 816372 2673291 PAM_724 Onion yellows phytoplasma OY-M hypothetical protein NP_950976.1 816154 R 262768 CDS NP_950977.1 39939211 2673292 complement(817019..817510) 1 NC_005303.2 possible pseudogene of transposase (Tra5); identified by sequence similarity; hypothetical protein 817510 2673292 PAM_725 Onion yellows phytoplasma OY-M hypothetical protein NP_950977.1 817019 R 262768 CDS NP_950978.1 39939212 2673346 818238..818567 1 NC_005303.2 identified by sequence similarity; putative; single-stranded DNA-binding protein 818567 ssb 2673346 ssb Onion yellows phytoplasma OY-M single-stranded DNA-binding protein NP_950978.1 818238 D 262768 CDS NP_950979.1 39939213 2673230 819036..820409 1 NC_005303.2 identified by sequence similarity; putative; FtsH; ATP-dependent Zn protease 820409 hflB 2673230 hflB Onion yellows phytoplasma OY-M ATP-dependent Zn protease NP_950979.1 819036 D 262768 CDS NP_950980.1 39939214 2673293 complement(820621..822714) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 822714 2673293 PAM_728 Onion yellows phytoplasma OY-M hypothetical protein NP_950980.1 820621 R 262768 CDS NP_950981.1 39939215 2673294 823075..823671 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 823671 2673294 PAM_729 Onion yellows phytoplasma OY-M hypothetical protein NP_950981.1 823075 D 262768 CDS NP_950982.1 39939216 2673295 823978..825231 1 NC_005303.2 identified by sequence similarity; putative; HD superfamily phosphohydrolase 825231 2673295 PAM_730 Onion yellows phytoplasma OY-M HD superfamily phosphohydrolase NP_950982.1 823978 D 262768 CDS NP_950983.1 39939217 2673429 825338..826144 1 NC_005303.2 identified by sequence similarity; putative; dimethyladenosine transferase 826144 ksgA 2673429 ksgA Onion yellows phytoplasma OY-M dimethyladenosine transferase NP_950983.1 825338 D 262768 CDS NP_950984.1 39939218 2673296 826420..826719 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 826719 2673296 PAM_732 Onion yellows phytoplasma OY-M hypothetical protein NP_950984.1 826420 D 262768 CDS NP_950985.1 39939219 2672933 826939..828939 1 NC_005303.2 identified by sequence similarity; putative; cation transport ATPase 828939 zntA 2672933 zntA Onion yellows phytoplasma OY-M cation transport ATPase NP_950985.1 826939 D 262768 CDS NP_950986.1 39939220 2672936 complement(829139..830638) 1 NC_005303.2 identified by sequence similarity; putative; Na+-driven multidrug efflux pump 830638 norM 2672936 norM Onion yellows phytoplasma OY-M Na+-driven multidrug efflux pump NP_950986.1 829139 R 262768 CDS NP_950987.1 39939221 2673193 complement(830761..831789) 1 NC_005303.2 identified by sequence similarity; putative; predicted S-adenosylmethionine-dependent; hypothetical protein 831789 2673193 PAM_735 Onion yellows phytoplasma OY-M hypothetical protein NP_950987.1 830761 R 262768 CDS NP_950988.1 39939222 2673040 complement(831894..832091) 1 NC_005303.2 identified by sequence similarity; putative; DNA-directed RNA polymerase subunit K/omega 832091 rpoZ 2673040 rpoZ Onion yellows phytoplasma OY-M DNA-directed RNA polymerase subunit K/omega NP_950988.1 831894 R 262768 CDS NP_950989.1 39939223 2673592 complement(832072..832710) 1 NC_005303.2 identified by sequence similarity; putative; guanylate kinase 832710 gmk 2673592 gmk Onion yellows phytoplasma OY-M guanylate kinase NP_950989.1 832072 R 262768 CDS NP_950990.1 39939224 2673450 complement(832861..835326) 1 NC_005303.2 identified by sequence similarity; putative; leucyl-tRNA synthetase 835326 leuS 2673450 leuS Onion yellows phytoplasma OY-M leucyl-tRNA synthetase NP_950990.1 832861 R 262768 CDS NP_950991.1 39939225 2673136 complement(835430..835660) 1 NC_005303.2 identified by sequence similarity; putative; acyl carrier protein 835660 acpP 2673136 acpP Onion yellows phytoplasma OY-M acyl carrier protein NP_950991.1 835430 R 262768 CDS NP_950992.1 39939226 2673030 complement(835931..836995) 1 NC_005303.2 identified by sequence similarity; putative; endo-1,4-beta-glucanase 836995 frvX 2673030 frvX Onion yellows phytoplasma OY-M endo-1,4-beta-glucanase NP_950992.1 835931 R 262768 CDS NP_950993.1 39939227 2673194 complement(836982..837611) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 837611 2673194 PAM_741 Onion yellows phytoplasma OY-M hypothetical protein NP_950993.1 836982 R 262768 CDS NP_950994.1 39939228 2673306 complement(837750..838373) 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L20 838373 rplT 2673306 rplT Onion yellows phytoplasma OY-M ribosomal protein L20 NP_950994.1 837750 R 262768 CDS NP_950995.1 39939229 2673003 complement(838388..838594) 1 NC_005303.2 identified by sequence similarity; putative; ribosomal protein L35 838594 rpmI 2673003 rpmI Onion yellows phytoplasma OY-M ribosomal protein L35 NP_950995.1 838388 R 262768 CDS NP_950996.1 39939230 2673446 complement(838727..839179) 1 NC_005303.2 identified by sequence similarity; putative; translation initiation factor IF3 839179 infC 2673446 infC Onion yellows phytoplasma OY-M translation initiation factor IF3 NP_950996.1 838727 R 262768 CDS NP_950997.1 39939231 2673583 complement(839910..840836) 1 NC_005303.2 identified by sequence similarity; putative; threonyl-tRNA synthetase 840836 thrS 2673583 thrS Onion yellows phytoplasma OY-M threonyl-tRNA synthetase NP_950997.1 839910 R 262768 CDS NP_950998.1 39939232 2673195 complement(841840..842778) 1 NC_005303.2 identified by sequence similarity; putative; hypothetical protein 842778 2673195 PAM_746 Onion yellows phytoplasma OY-M hypothetical protein NP_950998.1 841840 R 262768 CDS NP_950999.1 39939233 2673580 complement(842877..844259) 1 NC_005303.2 identified by sequence similarity; putative; tRNA modification GTPase 844259 thdF 2673580 thdF Onion yellows phytoplasma OY-M tRNA modification GTPase NP_950999.1 842877 R 262768 CDS NP_951000.1 39939234 2673196 complement(844478..845446) 1 NC_005303.2 identified by sequence similarity; putative; exopolyphosphatase-related protein 845446 2673196 PAM_748 Onion yellows phytoplasma OY-M exopolyphosphatase-related protein NP_951000.1 844478 R 262768 CDS NP_951001.1 39939235 2673164 complement(845481..847103) 1 NC_005303.2 identified by sequence similarity; putative; sugar-binding periplasmic protein 847103 ugpB 2673164 ugpB Onion yellows phytoplasma OY-M sugar-binding periplasmic protein NP_951001.1 845481 R 262768 CDS NP_951002.1 39939236 2673165 complement(847087..847881) 1 NC_005303.2 identified by sequence similarity; putative; sugar permease 847881 ugpE 2673165 ugpE Onion yellows phytoplasma OY-M sugar permease NP_951002.1 847087 R 262768 CDS NP_951003.1 39939237 2673163 complement(848010..848951) 1 NC_005303.2 identified by sequence similarity; putative; ABC-type sugar transport system, permease 848951 ugpA 2673163 ugpA Onion yellows phytoplasma OY-M ABC-type sugar transport system, permease NP_951003.1 848010 R 262768 CDS NP_951004.1 39939238 2673062 complement(849015..850058) 1 NC_005303.2 identified by sequence similarity; putative; ABC-type sugar transport system, ATPase 850058 malK 2673062 malK Onion yellows phytoplasma OY-M ABC-type sugar transport system, ATPase NP_951004.1 849015 R 262768 CDS NP_951005.1 39939239 2673197 complement(850309..850425) 1 NC_005303.2 identified by Glimmer2; hypothetical protein 850425 2673197 PAM_753 Onion yellows phytoplasma OY-M hypothetical protein NP_951005.1 850309 R 262768 CDS NP_951006.1 39939240 2672971 complement(850542..852062) 1 NC_005303.2 identified by sequence similarity; putative; aspartyl/asparaginyl-tRNA synthetase 852062 asnS 2672971 asnS Onion yellows phytoplasma OY-M aspartyl/asparaginyl-tRNA synthetase NP_951006.1 850542 R 262768 CDS