-- dump date   	20140619_223714
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_001368562.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
YP_001368563.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
YP_001368564.1	binds the polymerase to DNA and acts as a sliding clamp
YP_001368565.1	Required for DNA replication; binds preferentially to single-stranded, linear DNA
YP_001368566.1	ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase
YP_001368567.1	PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mll5576 hypothetical protein
YP_001368568.1	PFAM: protein of unknown function DUF521; KEGG: rde:RD1_3781 hypothetical protein
YP_001368569.1	PFAM: protein of unknown function DUF126; KEGG: pde:Pden_4854 protein of unknown function DUF521
YP_001368570.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bms:BR0005 D-isomer specific 2-hydroxyacid dehydrogenase family protein
YP_001368571.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bmb:BruAb1_0006 ABC transporter, ATP-binding protein
YP_001368572.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bme:BMEI1937 oligopeptide transport system permease protein OppC
YP_001368573.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb1_0008 ABC transporter, permease protein
YP_001368574.1	PFAM: extracellular solute-binding protein family 5; KEGG: bmb:BruAb1_0009 ABC transporter, periplasmic substrate-binding protein, hypothetical
YP_001368575.1	PFAM: extracellular solute-binding protein family 5; KEGG: bme:BMEI1934 periplasmic oligopeptide-binding protein precursor
YP_001368576.1	PFAM: cytochrome c class I; KEGG: bms:BR0039 cytochrome c, membrane-bound
YP_001368577.1	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS
YP_001368578.1	catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis
YP_001368579.1	PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; KEGG: bms:BR0036 MutT/NUDIX family protein
YP_001368580.1	PFAM: histidine triad (HIT) protein; KEGG: bmb:BruAb1_0035 hypothetical protein
YP_001368581.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA
YP_001368582.1	PFAM: conserved hypothetical protein 103; KEGG: bmb:BruAb1_0033 hypothetical protein
YP_001368583.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_001368584.1	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bmb:BruAb1_0031 hypothetical transglycosylase
YP_001368585.1	KEGG: bms:BR0030 hypothetical protein
YP_001368586.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmb:BruAb1_0029 transcriptional regulator, LysR family
YP_001368587.1	PFAM: conserved hypothetical protein 698; KEGG: bme:BMEI1914 hypothetical membrane spanning protein
YP_001368588.1	KEGG: hypothetical protein
YP_001368589.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
YP_001368590.1	Catalyzes the formation of (d)CDP from ATP and (d)CMP
YP_001368591.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
YP_001368592.1	KEGG: bmb:BruAb1_0024 hypothetical protein
YP_001368593.1	PFAM: Glutathione S-transferase domain; KEGG: bja:blr5350 glutathione S-transferase
YP_001368594.1	PFAM: acyltransferase 3; KEGG: bmb:BruAb1_0023 hypothetical protein
YP_001368595.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: rle:RL1692 putative transmembrane protein
YP_001368596.1	AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase
YP_001368597.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bmb:BruAb1_0020 Ivd, isovaleryl-CoA dehydrogenase
YP_001368598.1	PFAM: carboxyl transferase; KEGG: bms:BR0019 carboxyl transferase family protein
YP_001368599.1	PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: bmb:BruAb1_0018 biotin carboxylase
YP_001368600.1	catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA
YP_001368601.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001368602.1	PFAM: Extracellular ligand-binding receptor; KEGG: bms:BR0014 branched-chain amino acid ABC transporter, perisplasmic amino acid-binding protein, putative
YP_001368603.1	KEGG: atc:AGR_C_2266 hypothetical protein
YP_001368604.1	KEGG: bmb:BruAb1_0012 hypothetical protein
YP_001368605.1	PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: atc:AGR_C_1419 hypothetical protein
YP_001368606.1	KEGG: bms:BR0040 hypothetical protein
YP_001368608.1	TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: bmb:BruAb1_0042 CyoA, ubiquinol oxidase, subunit II
YP_001368609.1	TIGRFAM: Cytochrome o ubiquinol oxidase subunit I; PFAM: cytochrome c oxidase subunit I; KEGG: bme:BMEI1900 cytochrome O ubiquinol oxidase subunit I
YP_001368610.1	TIGRFAM: Cytochrome o ubiquinol oxidase subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: bms:BR0044 ubiquinol oxidase subunit III
YP_001368611.1	TIGRFAM: Cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: bmb:BruAb1_0045 QoxD, ubiquinol oxidase subunit IV
YP_001368612.1	PFAM: protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: bms:BR0047 hypothetical protein
YP_001368613.1	PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: bms:BR0048 putative outer membrane protein
YP_001368614.1	PFAM: protein of unknown function DUF490; KEGG: bmb:BruAb1_0049 hypothetical protein
YP_001368615.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bmb:BruAb1_0050 lipoprotein, hypothetical
YP_001368616.1	KEGG: bmb:BruAb1_0051 hypothetical protein
YP_001368617.1	KEGG: bme:BMEI1892 hypothetical cytosolic protein (cysteine-rich)
YP_001368618.1	PFAM: protein of unknown function DUF461; nuclear export factor GLE1; KEGG: bmb:BruAb1_0054 hypothetical protein
YP_001368619.1	KEGG: bmb:BruAb1_0055 hypothetical protein
YP_001368620.1	PFAM: glucose-methanol-choline oxidoreductase; KEGG: bja:blr7491 putative 2-keto-gluconate dehydrogenase
YP_001368621.1	KEGG: pde:Pden_4709 hypothetical protein
YP_001368622.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bms:BR0056 glyoxalase family protein
YP_001368623.1	KEGG: vfi:VF1213 hypothetical protein
YP_001368624.1	PFAM: protein of unknown function DUF59; KEGG: bms:BR0057 mrp-related protein
YP_001368625.1	catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate
YP_001368626.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bch:Bcen2424_5008 transcriptional regulator, AraC family
YP_001368627.1	KEGG: bxe:Bxe_A1397 hypothetical protein
YP_001368628.1	PFAM: ROK family protein; KEGG: ret:RHE_CH00464 sugar transcriptional regulator protein, ROK family
YP_001368629.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMc02171 putative periplasmic binding ABC transporter protein
YP_001368630.1	PFAM: inner-membrane translocator; KEGG: sme:SMc02170 putative permease ABC transporter protein
YP_001368631.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_CH00467 fructose ABC transporter, ATP-binding protein
YP_001368632.1	KEGG: bms:BR0062 hypothetical protein
YP_001368633.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bms:BR0063 fumarylacetoacetate hydrolase family protein
YP_001368634.1	KEGG: bmb:BruAb1_0064 hypothetical protein
YP_001368635.1	KEGG: bmb:BruAb1_0065 hypothetical protein
YP_001368636.1	KEGG: bmb:BruAb1_0066 hypothetical protein
YP_001368637.1	PFAM: Lytic transglycosylase catalytic; KEGG: bmb:BruAb1_0067 transglycosylase SLT domain protein
YP_001368638.1	PFAM: Hly-III family protein; KEGG: bmb:BruAb1_0068 channel protein, hemolysin III family
YP_001368639.1	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.
YP_001368640.1	KEGG: bmb:BruAb1_0070 hypothetical protein
YP_001368641.1	KEGG: bms:BR0071 hypothetical protein
YP_001368642.1	KEGG: rpd:RPD_2767 hypothetical protein
YP_001368643.1	PFAM: regulatory protein MarR; KEGG: rpd:RPD_2769 regulatory protein, MarR
YP_001368644.1	KEGG: ilo:IL2066 hypothetical protein
YP_001368645.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: bxe:Bxe_B0269 peptidase M24A, methionine aminopeptidase, subfamily 1
YP_001368646.1	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming
YP_001368647.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mlo:mll2956 hypothetical protein
YP_001368648.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bme:BMEI1869 homoserine/homoserine lactone efflux protein
YP_001368649.1	KEGG: bms:BR0076 hypothetical protein
YP_001368650.1	TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: bme:BMEI1867 florfenicol resistance protein
YP_001368651.1	KEGG: bmb:BruAb1_0078 hypothetical protein
YP_001368652.1	PFAM: protein of unknown function DUF1232; KEGG: bms:BR0081 hypothetical protein
YP_001368653.1	KEGG: bch:Bcen2424_4714 hypothetical protein
YP_001368654.1	4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction
YP_001368655.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bme:BMEI1863 low molecular weight phosphotyrosine protein phosphatase
YP_001368656.1	TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: bmb:BruAb1_0082 2'-5' RNA ligase
YP_001368657.1	PFAM: lipolytic protein G-D-S-L family; KEGG: bmb:BruAb1_0083 lipase/acylhydrolase domain protein
YP_001368658.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_0084 ABC transporter, ATP-binding protein
YP_001368659.1	PFAM: protein of unknown function DUF214; KEGG: bmb:BruAb1_0085 ABC transporter, permease protein
YP_001368660.1	PFAM: protein of unknown function UPF0005; KEGG: bmb:BruAb1_0086 hypothetical membrane protein
YP_001368661.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bms:BR0089 phosphinothricin N-acetyltransferase
YP_001368662.1	KEGG: bmb:BruAb1_0088 hypothetical protein
YP_001368663.1	PFAM: protein of unknown function DUF1223; KEGG: bme:BMEI1856 hypothetical protein
YP_001368664.1	KEGG: hch:HCH_02263 hypothetical protein
YP_001368665.1	Catalyzes the conversion of citrate to isocitrate
YP_001368666.1	ATP-binding protein; required for proper cytochrome c maturation
YP_001368667.1	TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: bmb:BruAb1_0092 CcmB, heme exporter protein
YP_001368668.1	TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: bme:BMEI1851 heme exporter protein C
YP_001368669.1	PFAM: Heme exporter protein D (CcmD); KEGG: bmb:BruAb1_0094 heme exporter protein D
YP_001368670.1	TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: bmb:BruAb1_0095 CycY, thiol:disulfide interchange protein, thioredoxin family
YP_001368672.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_001368673.1	KEGG: bmb:BruAb1_0098 hypothetical protein
YP_001368674.1	PFAM: response regulator receiver; KEGG: bmb:BruAb1_0099 response regulator, hypothetical
YP_001368675.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: bmb:BruAb1_0100 transcriptional regulator, hypothetical
YP_001368676.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: reh:H16_A0406 hypothetical protein with GGDEF domain
YP_001368677.1	PFAM: protein of unknown function DUF930; KEGG: bmb:BruAb1_0101 hypothetical protein
YP_001368678.1	KEGG: bmb:BruAb1_0102 hypothetical protein
YP_001368679.1	PFAM: protein of unknown function DUF218; KEGG: bme:BMEI1842 hypothetical protein
YP_001368680.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bmb:BruAb1_0104 sulfate ABC transporter, sulfate-binding protein
YP_001368681.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bme:BMEI1840 sulfate transport system permease protein CysT
YP_001368682.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb1_0106 CysW-1, sulfate ABC transporter, permease protein
YP_001368683.1	TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_0107 hypothetical sulfate ABC transporter, ATP-binding protein
YP_001368684.1	PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: bmb:BruAb1_0108 cyclic beta 1-2 glucan synthetase
YP_001368685.1	catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate
YP_001368686.1	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: bms:BR0113 phenazine biosynthesis protein, PhzF family
YP_001368687.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bms:BR0114 hypothetical protein
YP_001368688.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mlo:mlr8191 hypothetical protein
YP_001368689.1	PFAM: PfkB domain protein; KEGG: bmb:BruAb1_0112 CscK, fructokinase
YP_001368690.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bmb:BruAb1_0113 oxidoreductase, short chain dehydrogenase/reductase family
YP_001368691.1	TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bms:BR0117 penicillin-binding protein, 1A family
YP_001368692.1	PFAM: porin; KEGG: bmb:BruAb1_0115 outer membrane protein, hypothetical
YP_001368693.1	PFAM: porin; KEGG: bmb:BruAb1_0116 outer membrane protein, hypothetical
YP_001368694.1	PFAM: acyltransferase 3; KEGG: rpe:RPE_4819 acyltransferase 3
YP_001368695.1	PFAM: 3'-5' exonuclease; KEGG: bmb:BruAb1_0117 3-5 exonuclease family protein
YP_001368696.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bms:BR0121 hypothetical protein
YP_001368697.1	has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair
YP_001368698.1	PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bmb:BruAb1_0121 ATP-dependent RNA helicase, DEAD/DEAH box family
YP_001368699.1	negatively supercoils closed circular double-stranded DNA
YP_001368700.1	PFAM: cytochrome P450; KEGG: mlo:mlr5192 similar to cytochrome P450
YP_001368701.1	TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; KEGG: bmb:BruAb1_0124 esterase, hypothetical
YP_001368702.1	PFAM: protein of unknown function DUF1345; KEGG: bms:BR0128 hypothetical protein
YP_001368703.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bms:BR0129 acetyltransferase, GNAT family
YP_001368704.1	TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bme:BMEI1819 alcohol dehydrogenase class III
YP_001368705.1	PFAM: protein of unknown function DUF156; KEGG: bms:BR0131 hypothetical protein
YP_001368706.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pau:PA14_45980 putative acetyltransferase
YP_001368707.1	TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases; KEGG: mlo:mlr5306 ATP-dependent helicase
YP_001368708.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bmb:BruAb1_0130 sensor histidine kinase
YP_001368709.1	KEGG: sme:SMc01008 hypothetical protein
YP_001368710.1	PFAM: response regulator receiver; KEGG: bmb:BruAb1_0134 DNA-binding response regulator
YP_001368711.1	PFAM: protein of unknown function DUF1052; KEGG: bms:BR0138 hypothetical protein
YP_001368712.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bmb:BruAb1_0136 lipoprotein, hypothetical
YP_001368713.1	PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: bmb:BruAb1_0137 NifU-related protein
YP_001368714.1	PFAM: UspA domain protein; KEGG: bmb:BruAb1_0138 hypothetical protein
YP_001368715.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001368716.1	TIGRFAM: integral membrane protein MviN; PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: bmb:BruAb1_0140 MviN, virulence factor
YP_001368717.1	catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein
YP_001368718.1	NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate
YP_001368719.1	This protein performs the mismatch recognition step during the DNA repair process
YP_001368720.1	KEGG: bms:BR0148 hypothetical protein
YP_001368721.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_001368722.1	PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: bms:BR0150 RNA methyltransferase, TrmH family
YP_001368723.1	PFAM: conserved hypothetical protein 95; KEGG: bmf:BAB1_0150 SAM dependent methyltransferase, putative
YP_001368724.1	KEGG: bmb:BruAb1_0148 hypothetical protein
YP_001368725.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_001368726.1	TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: bmb:BruAb1_0150 SppA, signal peptide peptidase SppA
YP_001368727.1	PFAM: protein of unknown function DUF1239; KEGG: bmb:BruAb1_0151 hypothetical protein
YP_001368728.1	PFAM: OstA family protein; KEGG: bmb:BruAb1_0152 hypothetical protein
YP_001368729.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_0153 ABC transporter, ATP-binding protein
YP_001368730.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen
YP_001368731.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: bms:BR0160 ribosomal subunit interface protein
YP_001368732.1	TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bmb:BruAb1_0157 PtsN, PTS system, nitrogen regulatory IIA component
YP_001368733.1	PFAM: protein of unknown function DUF1150; KEGG: bmb:BruAb1_0158 hypothetical protein
YP_001368734.1	PFAM: heat shock protein Hsp20; KEGG: bms:BR0163 heat shock protein, HSP20 family
YP_001368735.1	KEGG: bms:BR0165 hypothetical protein
YP_001368736.1	TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: bme:BMEI1782 endonuclease III
YP_001368737.1	putative role in sulfur assimilation
YP_001368738.1	PFAM: PfkB domain protein; KEGG: bmb:BruAb1_0165 carbohydrate kinase, PfkB family
YP_001368739.1	PFAM: protein of unknown function UPF0126; KEGG: bme:BMEI1778 transporter
YP_001368740.1	with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor
YP_001368741.1	Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
YP_001368742.1	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs
YP_001368743.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bms:BR0174 glyoxalase family protein
YP_001368744.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
YP_001368745.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_001368746.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bmb:BruAb1_0173 tetrapyrrole methylase family protein
YP_001368747.1	PFAM: protein of unknown function UPF0102; KEGG: bmb:BruAb1_0174 hypothetical protein
YP_001368748.1	TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bmb:BruAb1_0175 CysG, siroheme synthase
YP_001368749.1	KEGG: bmb:BruAb1_0176 hypothetical protein
YP_001368750.1	PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: bms:BR0181 sulfite reductase (NADPH) hemoprotein beta-component
YP_001368751.1	catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite
YP_001368752.1	PFAM: uncharacterised conserved protein UCP030820; KEGG: bmb:BruAb1_0179 hypothetical protein
YP_001368753.1	PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: bmb:BruAb1_0180 hypothetical protein
YP_001368754.1	TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: bmb:BruAb1_0181 Ogt, methylated-DNA--protein-cysteine methyltransferase
YP_001368755.1	KEGG: bmb:BruAb1_0182 hypothetical protein
YP_001368756.1	PFAM: BA14K family protein; KEGG: bmb:BruAb1_0183 hypothetical protein
YP_001368757.1	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity
YP_001368758.1	PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; Bacterio-opsin activator HTH domain protein; KEGG: bmb:BruAb1_0185 transcriptional regulator, LuxR autoinducer regulated family
YP_001368759.1	PFAM: aminotransferase class-III; KEGG: bmb:BruAb1_0186 hypothetical protein
YP_001368760.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
YP_001368761.1	in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis
YP_001368762.1	TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: bme:BMEI1753 cysQ protein
YP_001368763.1	PFAM: phage integrase family protein; KEGG: nha:Nham_3311 phage integrase
YP_001368768.1	PFAM: HNH endonuclease; KEGG: ngo:NGO1102 hypothetical protein, putative phage associated protein
YP_001368773.1	KEGG: bcl:ABC1366 hypothetical protein
YP_001368774.1	KEGG: mes:Meso_1188 hypothetical protein
YP_001368779.1	PFAM: helix-turn-helix domain protein; peptidase S24 S26A and S26B; bacteriophage CI repressor; KEGG: sme:SMc04198 putative phage repressor protein
YP_001368780.1	KEGG: nha:Nham_3124 cytoplasmic chaperone TorD
YP_001368784.1	KEGG: mes:Meso_1198 hypothetical protein
YP_001368785.1	TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: gka:GK1191 acyl carrier protein (ACP)
YP_001368786.1	PFAM: LexA DNA-binding domain protein; KEGG: aba:Acid345_0581 SOS-response transcriptional repressor, LexA
YP_001368787.1	PFAM: Myb DNA-binding
YP_001368789.1	PFAM: DnaB domain protein helicase domain protein; KEGG: mlo:mll7836 replicative DNA helicase
YP_001368790.1	PFAM: C-5 cytosine-specific DNA methylase; KEGG: bcl:ABC2849 site-specific DNA-methyltransferase
YP_001368795.1	KEGG: pde:Pden_0985 HNH endonuclease
YP_001368797.1	KEGG: mlo:mlr8520 hypothetical protein
YP_001368798.1	PFAM: phage Terminase; KEGG: mlo:mlr8521 hypothetical protein
YP_001368799.1	PFAM: peptidase U35 phage prohead HK97; KEGG: bpm:BURPS1710b_1641 Caudovirus prohead protease, putative
YP_001368800.1	KEGG: ecs:ECs2250 putative major head protein/prohead protease
YP_001368803.1	TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: ecs:ECs1544 putative portal protein
YP_001368804.1	KEGG: ecs:ECs1975 hypothetical protein
YP_001368805.1	TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: ecs:ECs1545 hypothetical protein
YP_001368806.1	TIGRFAM: phage head-tail adaptor, putative; KEGG: sit:TM1040_1666 hypothetical protein
YP_001368807.1	TIGRFAM: phage protein, HK97 gp10 family; KEGG: pde:Pden_0997 phage protein, HK97 GP10 family
YP_001368808.1	KEGG: pde:Pden_0367 hypothetical protein
YP_001368810.1	KEGG: pde:Pden_0371 hypothetical protein
YP_001368811.1	KEGG: pde:Pden_3770 hypothetical protein
YP_001368812.1	KEGG: nar:Saro_2741 hypothetical protein
YP_001368813.1	KEGG: pde:Pden_3598 hypothetical protein
YP_001368814.1	KEGG: bxe:Bxe_A3072 hypothetical protein
YP_001368815.1	KEGG: mlo:mlr8543 hypothetical protein
YP_001368816.1	PFAM: Fibronectin type III domain protein; KEGG: bme:BMEI1000 hypothetical protein
YP_001368817.1	KEGG: bms:BR0980 hypothetical protein
YP_001368819.1	PFAM: glycosyl transferase family 2; KEGG: noc:Noc_2178 glycosyl transferase, family 2
YP_001368820.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sus:Acid_2376 methyltransferase type 11
YP_001368821.1	KEGG: mes:Meso_0243 hypothetical protein
YP_001368822.1	KEGG: sme:SMb20921 hypothetical protein
YP_001368825.1	PFAM: protein of unknown function DUF1062; KEGG: rle:RL2642 hypothetical protein
YP_001368826.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bmb:BruAb1_0191 transcriptional regulator, Crp/Fnr family
YP_001368827.1	PFAM: regulatory protein LuxR; KEGG: bmf:BAB1_0197 bacterial regulatory protein, LuxR family
YP_001368828.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: bmb:BruAb1_0194 GlpR, glycerol-3-phosphate transcriptional regulator
YP_001368829.1	in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane
YP_001368830.1	PFAM: helix-turn-helix Fis-type; GAF domain protein; KEGG: bmb:BruAb1_0196 transcriptional regulator, Fis family
YP_001368831.1	PFAM: aldehyde dehydrogenase; KEGG: bme:BMEI1747 aldehyde dehydrogenase
YP_001368832.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bmb:BruAb1_0198 alcohol dehydrogenase, zinc-containing
YP_001368833.1	PFAM: protein of unknown function DUF779; KEGG: bmb:BruAb1_0199 hypothetical protein
YP_001368834.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bmb:BruAb1_0200 transcriptional regulator LacI family
YP_001368835.1	PFAM: sulfatase; KEGG: mlo:mll7848 putative cyclic beta-1,2-glucan modification protein
YP_001368836.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mll0815 ATP-binding protein of ABC transporter
YP_001368837.1	PFAM: aldehyde dehydrogenase; KEGG: bms:BR0210 aldehyde dehydrogenase family protein
YP_001368838.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb1_0206 ABC transporter, permease protein
YP_001368839.1	PFAM: TENA/THI-4 domain protein; KEGG: bms:BR0212 transcriptional regulator TenA, putative
YP_001368840.1	PFAM: NMT1/THI5 like domain protein; KEGG: bmb:BruAb1_0208 ABC transporter, periplasmic substrate-binding protein
YP_001368841.1	Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate
YP_001368842.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
YP_001368843.1	TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: bmb:BruAb1_0211 thiamine biosynthesis ThiS
YP_001368844.1	TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: bmb:BruAb1_0212 D-amino acid oxidase family protein
YP_001368845.1	TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: bme:BMEI1732 phosphomethylpyrimidine kinase / hydroxymethylpyrimidine kinase
YP_001368846.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: bms:BR0219 sensory box/GGDEF domain/EAL domain protein
YP_001368847.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: bme:BMEI1730 copper-transporting ATPase
YP_001368848.1	PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; KEGG: mlo:mll7215 probable tagatose 6-phosphate kinase agaZ
YP_001368849.1	PFAM: PfkB domain protein; KEGG: sme:SMb21374 putative sugar kinase, PfkB family protein
YP_001368850.1	PFAM: inner-membrane translocator; KEGG: sme:SMb21375 putative sugar uptake ABC transporter permease protein
YP_001368851.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pde:Pden_4850 ABC transporter related
YP_001368852.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb21377 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor
YP_001368853.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: pde:Pden_4846 periplasmic binding protein/LacI transcriptional regulator
YP_001368854.1	PFAM: Pyrrolo-quinoline quinone; KEGG: sme:SMc00110 probable glucose dehydrogenase (pyrroloquinoline-quinone) protein
YP_001368855.1	TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bmb:BruAb1_0216 transcriptional regulator, MerR family
YP_001368856.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0222 ABC transporter, permease protein
YP_001368857.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_0218 ABC transporter, ATP-binding protein
YP_001368858.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb1_0219 ABC transporter, permease protein
YP_001368859.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bmb:BruAb1_0220 ABC transporter, periplasmic substrate-binding protein, hypothetical
YP_001368860.1	PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: bms:BR0227 glutamate dehydrogenase, putative
YP_001368861.1	TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: bms:BR0229 sarcosine oxidase, beta subunit
YP_001368862.1	TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: bmb:BruAb1_0225 SoxD, sarcosine oxidase, delta subunit
YP_001368863.1	TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein barrel; KEGG: bms:BR0231 sarcosine oxidase, alpha subunit
YP_001368864.1	PFAM: Sarcosine oxidase gamma subunit; KEGG: bmb:BruAb1_0227 SoxG, sarcosine oxidase, gamma subunit
YP_001368865.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mlo:mll7158 hypothetical protein
YP_001368866.1	KEGG: sme:SMb21090 conserved hypothetical membrane-anchored protein
YP_001368867.1	PFAM: amidohydrolase 2; KEGG: bme:BMEI1718 purine/pyrimidine phosphoribosyl transferase
YP_001368868.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bms:BR0234 transcriptional regulator, IclR family
YP_001368869.1	PFAM: extracellular solute-binding protein family 1; KEGG: bmb:BruAb1_0230 sugar ABC transporter, periplasmic sugar-binding protein
YP_001368870.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb1_0231 sugar ABC transporter, permease protein
YP_001368871.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0237 sugar ABC transporter, permease protein
YP_001368872.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bms:BR0238 sugar ABC transporter, ATP-binding protein
YP_001368873.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bmb:BruAb1_0234 mandelate racemase/muconate lactonizing enzyme family protein
YP_001368874.1	PFAM: protein of unknown function DUF718; KEGG: bmb:BruAb1_0235 hypothetical protein
YP_001368875.1	PFAM: oxidoreductase domain protein; KEGG: bms:BR0241 oxidoreductase, Gfo/Idh/MocA family
YP_001368876.1	PFAM: MaoC domain protein dehydratase; KEGG: sme:SMb21110 putative MaoC-like (monoamine oxidase-like) protein, similar to NodN
YP_001368877.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mes:Meso_3546 short-chain dehydrogenase/reductase SDR
YP_001368878.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mes:Meso_3545 fumarylacetoacetate (FAA) hydrolase
YP_001368879.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bms:BR0245 mandelate racemase/muconate lactonizing enzyme domain protein
YP_001368880.1	PFAM: protein of unknown function DUF606; KEGG: mlo:mll0725 hypothetical protein
YP_001368881.1	PFAM: protein of unknown function DUF329; KEGG: bme:BMEI1673 zinc-binding protein
YP_001368882.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
YP_001368883.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_001368884.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bmb:BruAb1_0278 protein phosphatase, hypothetical
YP_001368885.1	PFAM: uncharacterised conserved protein UCP032146; KEGG: bmb:BruAb1_0279 hypothetical protein
YP_001368886.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
YP_001368887.1	KEGG: bmb:BruAb1_0281 hypothetical protein
YP_001368888.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_001368889.1	KEGG: bmb:BruAb1_0283 hypothetical protein
YP_001368890.1	KEGG: mlo:mll1046 cytochrome c oxidase subunit I
YP_001368891.1	PFAM: Urease accessory protein UreD; KEGG: bms:BR0267 urease accessory protein UreD
YP_001368892.1	UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter
YP_001368893.1	PFAM: HupE/UreJ protein; KEGG: mes:Meso_2682 HupE/UreJ protein
YP_001368894.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active
YP_001368895.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
YP_001368896.1	involved in the assembly of the urease metallocenter; possible nickel donor
YP_001368897.1	KEGG: bms:BR0272 urease accessory protein UreF, putative
YP_001368898.1	TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: bmb:BruAb1_0299 UreG-1, urease accessory protein UreG
YP_001368899.1	PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: hne:HNE_1798 deoxyribodipyrimidine photolyase family protein
YP_001368900.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bms:BR0274 sensor histidine kinase
YP_001368901.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bms:BR0276 transporter, putative
YP_001368902.1	PFAM: acriflavin resistance protein; KEGG: bms:BR0277 AcrB/AcrD/AcrF multidrug efflux protein
YP_001368903.1	PFAM: NMT1/THI5 like domain protein; KEGG: sme:SMc01827 hypothetical protein
YP_001368904.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_2046 binding-protein-dependent transport systems inner membrane component
YP_001368905.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01825 putative permease ABC transporter protein
YP_001368906.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_4331 putative ABC-transport protein, ATP-binding component
YP_001368907.1	catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position
YP_001368908.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
YP_001368909.1	PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: bmb:BruAb1_0306 transcriptional regulator, TetR family
YP_001368910.1	PFAM: NUDIX hydrolase; KEGG: bms:BR0281 MutT/NUDIX family protein
YP_001368911.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PE00248 probable sugar ABC transporter, ATP-binding protein
YP_001368912.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01979 putative sugar transport system permease ABC transporter protein
YP_001368913.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL110365 putative permease component of ABC transporter
YP_001368914.1	PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc01977 putative sugar-binding periplasmic ABC transporter protein
YP_001368915.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rle:pRL110363 putative methionine lyase
YP_001368916.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ret:RHE_PE00243 probable transcriptional regulator protein, GntR family
YP_001368917.1	PFAM: aldo/keto reductase; KEGG: atc:AGR_L_2031 hypothetical protein
YP_001368918.1	PFAM: PfkB domain protein; KEGG: mlo:mlr3534 probable sugar kinase
YP_001368919.1	PFAM: dihydrodipicolinate synthetase; KEGG: atc:AGR_C_4548 hypothetical protein
YP_001368920.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: atc:AGR_C_4549 hypothetical protein
YP_001368921.1	PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_C_4552 putative multiple sugar transport system substrate-binding protein
YP_001368922.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4553 putative multiple sugar transport system permease protein
YP_001368923.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4555 hypothetical protein
YP_001368924.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: atc:AGR_C_4558 probable ABC transporter ATP-binding protein Y4OS
YP_001368925.1	catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines
YP_001368926.1	function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain
YP_001368927.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: mlo:mlr2632 hypothetical protein
YP_001368928.1	PFAM: cyclase/dehydrase; carbon monoxide dehydrogenase subunit G; KEGG: bmb:BruAb1_0310 hypothetical protein
YP_001368929.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
YP_001368930.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bms:BR0286 hypothetical protein
YP_001368931.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bms:BR0287 hydrolase, haloacid dehalogenase-like family
YP_001368932.1	PFAM: Glutathione S-transferase domain; KEGG: bja:blr1415 hypothetical glutathione S-transferase like protein
YP_001368933.1	activates fatty acids by binding to coenzyme A
YP_001368934.1	PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain protein; KEGG: bme:BMEI1631 transcriptional regulator, tetR family
YP_001368935.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bms:BR0291 HlyD family secretion protein
YP_001368936.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bmb:BruAb1_0318 hydrophobe/amphiphile efflux-1 family protein
YP_001368937.1	KEGG: bms:BR0293 hypothetical protein
YP_001368938.1	PFAM: extracellular solute-binding protein family 3; KEGG: bms:BR0295 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001368939.1	PFAM: glycosyl transferase family 2; KEGG: bmb:BruAb1_0322 glycosyl transferase, group 2 family protein
YP_001368940.1	PFAM: protein of unknown function DUF344; KEGG: bmb:BruAb1_0323 hypothetical protein
YP_001368941.1	TIGRFAM: Phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bmb:BruAb1_0324 sensor histidine kinase, hypothetical
YP_001368942.1	KEGG: rpd:RPD_3294 protein involved in cellulose biosynthesis (CelD)-like
YP_001368943.1	PFAM: glycosyl transferase family 2; KEGG: sme:SMb21500 putative glycosyltransferase protein
YP_001368944.1	KEGG: sme:SMb21499 hypothetical protein
YP_001368945.1	KEGG: sme:SMb21512 hypothetical membrane protein
YP_001368946.1	PFAM: polysaccharide biosynthesis protein; KEGG: sme:SMb21513 putative cell-surface polysaccharide exporter protein, PST family
YP_001368947.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: sme:SMb21506 putative auxiliar protein involved in export of cell surface polysaccharides, MPA1 family without cytosolic domain, slightly ExoP-like
YP_001368948.1	PFAM: O-antigen polymerase; KEGG: sme:SMb21505 putative membrane protein, similar to Wzy-like polysaccharide polymerase ExoQ
YP_001368949.1	KEGG: nha:Nham_4172 ISSpo6, transposase orf A
YP_001368950.1	PFAM: polysaccharide deacetylase; KEGG: mes:Meso_2876 polysaccharide deacetylase
YP_001368951.1	PFAM: glycosyl transferase group 1; KEGG: mes:Meso_2877 glycosyl transferase, group 1
YP_001368952.1	PFAM: glycosyl transferase group 1; Protein of unknown function DUF1972; KEGG: mes:Meso_2878 glycosyl transferase, group 1
YP_001368953.1	PFAM: GcrA cell cycle regulator; KEGG: bmb:BruAb1_0325 hypothetical protein
YP_001368954.1	DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine
YP_001368955.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
YP_001368956.1	becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers
YP_001368957.1	protein associated with Co2+ and Mg2+ efflux
YP_001368958.1	catalyzes the conversion of O-succinylhomoserine and sulfide to homocysteine; second step in methionine biosynthesis
YP_001368959.1	Catalyzes the deamination of dCTP to form dUTP
YP_001368960.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bme:BMEI1615 transcriptional regulator, AraC family
YP_001368961.1	KEGG: bms:BR0308 hypothetical protein
YP_001368962.1	PFAM: SCP-like extracellular; KEGG: bmb:BruAb1_0335 hypothetical protein
YP_001368963.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bmb:BruAb1_0336 DNA-damage-inducible protein F, hypothetical
YP_001368964.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
YP_001368965.1	PFAM: protein of unknown function DUF952; KEGG: bmb:BruAb1_0338 hypothetical protein
YP_001368966.1	KEGG: bmb:BruAb1_0339 hypothetical protein
YP_001368967.1	TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; KEGG: bmb:BruAb1_0340 Pip, proline iminopeptidase
YP_001368968.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bmb:BruAb1_0341 DNA-binding response regulator, LuxR family
YP_001368969.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bms:BR0316 sensor histidine kinase/response regulator
YP_001368970.1	homopentamer; channel that opens in response to pressure or hypoosmotic shock
YP_001368971.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
YP_001368972.1	catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine
YP_001368973.1	KEGG: sme:SMc04209 hypothetical protein
YP_001368974.1	PFAM: polysaccharide deacetylase; KEGG: bmb:BruAb1_0346 polysaccharide deacetylase family protein
YP_001368975.1	PFAM: glycosyl transferase family 25; KEGG: bms:BR0321 glycosyl transferase, family 25
YP_001368976.1	KEGG: mes:Meso_2115 hypothetical protein
YP_001368977.1	KEGG: bmb:BruAb1_0348 hypothetical protein
YP_001368978.1	PFAM: protein of unknown function DUF1127; KEGG: mlo:msr1062 hypothetical protein
YP_001368979.1	KEGG: bmb:BruAb1_0349 hypothetical protein
YP_001368980.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bms:BR0324 transcriptional regulator, LysR family
YP_001368981.1	PFAM: LrgA family protein; KEGG: bmb:BruAb1_0351 holin-like protein
YP_001368982.1	PFAM: LrgB family protein; KEGG: bme:BMEI1596 LrgB protein
YP_001368983.1	PFAM: phospholipase/Carboxylesterase; Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pde:Pden_0331 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001368984.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll3759 similar to ABC transporter (binding protein)
YP_001368985.1	PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: bms:BR0328 lipoprotein, putative
YP_001368986.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_001368987.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
YP_001368988.1	KEGG: rle:pRL110618 hypothetical protein
YP_001368989.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
YP_001368990.1	TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ret:RHE_PE00440 L-aspartate oxidase protein
YP_001368991.1	catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide
YP_001368992.1	PFAM: regulatory protein TetR; KEGG: mlo:mlr2543 probable transcriptional regulator
YP_001368993.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bmb:BruAb1_0357 Fpr, ferredoxin--NADP reductase
YP_001368994.1	PFAM: manganese and iron superoxide dismutase; KEGG: gox:GOX1800 superoxide dismutase [Fe]
YP_001368995.1	KEGG: bpm:BURPS1710b_A0077 predicted transcriptional regulator
YP_001368996.1	PFAM: major facilitator superfamily MFS_1; KEGG: bte:BTH_II1278 major facilitator superfamily protein superfamily
YP_001368997.1	TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bmb:BruAb1_0360 NspC, carboxynorspermidine decarboxylase
YP_001368998.1	PFAM: Saccharopine dehydrogenase; KEGG: bmb:BruAb1_0361 hypothetical protein
YP_001368999.1	PFAM: proline racemase; KEGG: bmb:BruAb1_0363 hypothetical proline racemase
YP_001369000.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bms:BR0339 multidrug resistance protein NorM, putative
YP_001369001.1	PFAM: Invasion associated locus B family protein; KEGG: bmb:BruAb1_0366 invasion protein B
YP_001369002.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; Cache type 2 domain protein; KEGG: bmf:BAB1_0369 gliadin, alpha/beta:ATP-binding region, ATPase-like:bacterial sensor protein, C-terminal:histidine kinase
YP_001369003.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bms:BR0342 DNA-binding response regulator, LuxR family
YP_001369004.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: bms:BR0343 hypothetical protein
YP_001369005.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bmb:BruAb1_0370 TRAP dicarboxylate transporter, DctM subunit, hypothetical
YP_001369006.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bms:BR0345 extracellular solute-binding protein, family 7
YP_001369007.1	PFAM: porin; KEGG: bmb:BruAb1_0657 Omp2b, porin
YP_001369008.1	PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: bmb:BruAb1_0372 hypothetical protein
YP_001369009.1	PFAM: polysaccharide deacetylase; KEGG: bmb:BruAb1_0373 hypothetical protein
YP_001369010.1	TIGRFAM: Hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: sme:SMb21285 conserved hypothetical protein, transthyretin-like protein
YP_001369011.1	TIGRFAM: Xanthine dehydrogenase small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: bms:BR0349 xanthine dehydrogenase, putative
YP_001369012.1	TIGRFAM: Xanthine dehydrogenase molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bms:BR0350 xanthine dehydrogenase, putative
YP_001369013.1	TIGRFAM: Xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: bme:BMEI1574 XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
YP_001369014.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmb:BruAb1_0378 transcriptional regulator, LysR family
YP_001369015.1	PFAM: protein of unknown function DUF989; KEGG: bme:BMEI1572 hypothetical membrane spanning protein
YP_001369016.1	Catalyzes the deamination of guanine
YP_001369017.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: sme:SMb20682 putative acetate operon repressor IclR protein
YP_001369018.1	catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate
YP_001369019.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMb20680 putative hydroxypyruvate isomerase protein
YP_001369020.1	TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: sme:SMb20679 putative tartronate semialdehyde reductase protein
YP_001369021.1	PFAM: MOFRL domain protein; KEGG: bmb:BruAb1_0381 hydroxypyruvate reductase, hypothetical
YP_001369022.1	TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: bmb:BruAb1_0382 CcoS, cytochrome oxidase maturation protein
YP_001369023.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: bms:BR0357 nitrogen fixation protein FixI, putative
YP_001369024.1	PFAM: FixH family protein; KEGG: bms:BR0358 FixH protein, putative
YP_001369025.1	TIGRFAM: Cytochrome c oxidase cbb3 type accessory protein FixG; KEGG: bms:BR0359 iron-sulfur cluster-binding protein
YP_001369026.1	TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: bmb:BruAb1_0386 CcoP, cytochrome c oxidase, cbb3-type, subunit III
YP_001369027.1	PFAM: Cbb3-type cytochrome oxidase component; KEGG: bmb:BruAb1_0387 CcoQ, cytochrome c oxidase, cbb3-type, CcoQ subunit
YP_001369028.1	CcoO; FixO
YP_001369029.1	CcoN; FixN
YP_001369030.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpd:RPD_4242 ATP-binding region, ATPase-like
YP_001369031.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_4906 two component transcriptional regulator, winged helix family
YP_001369032.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: rpb:RPB_4360 thiol:disulfide interchange protein
YP_001369033.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rsp:RSP_1873 hypothetical protein
YP_001369034.1	PFAM: DSBA oxidoreductase; KEGG: bmb:BruAb1_0392 twin-arginine translocation signal domain protein
YP_001369036.1	TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: bme:BMEI1558 ADA regulatory protein / O-6-methylguanine-DNA-alkyltransferase
YP_001369037.1	KEGG: mlo:mlr1862 hypothetical protein
YP_001369038.1	PFAM: arsenate reductase and related; KEGG: bms:BR0369 hypothetical protein
YP_001369039.1	KEGG: bmb:BruAb1_0396 hypothetical protein
YP_001369040.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
YP_001369041.1	KEGG: rle:RL1169 conserved hypothethetical protein
YP_001369042.1	PFAM: regulatory protein ArsR; KEGG: ret:RHE_CH01412 probable transcriptional regulator protein, ArsR family
YP_001369043.1	KEGG: mlo:mll3729 hypothetical protein
YP_001369044.1	PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: bmf:BAB1_0401 tetracycline resistance protein:major facilitator superfamily (MFS)
YP_001369045.1	in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope
YP_001369046.1	PFAM: polysaccharide deacetylase; KEGG: bmb:BruAb1_0399 hypothetical protein
YP_001369047.1	KEGG: bmb:BruAb1_0400 hypothetical protein
YP_001369048.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_001369049.1	KEGG: rme:Rmet_4957 hypothetical protein
YP_001369050.1	PFAM: OmpA/MotB domain protein; KEGG: bpa:BPP2398 putative lipoprotein
YP_001369051.1	KEGG: bpe:BP2020 hypothetical protein
YP_001369052.1	KEGG: bmb:BruAb1_0402 heat shock protein, Hsp70 family
YP_001369053.1	TIGRFAM: signal peptidase I; PFAM: peptidase S24 S26A and S26B; KEGG: rpa:RPA2696 putative signal peptidase I
YP_001369054.1	KEGG: sme:SMb21025 hypothetical protein
YP_001369055.1	PFAM: TENA/THI-4 domain protein; KEGG: ppu:PP_3185 pet18 protein
YP_001369056.1	PFAM: protein of unknown function DUF1311; KEGG: pde:Pden_3085 protein of unknown function DUF1311
YP_001369057.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: pau:PA14_28950 hypothetical protein
YP_001369058.1	PFAM: cell wall hydrolase SleB; KEGG: bmb:BruAb1_0404 hypothetical protein
YP_001369059.1	KEGG: bmb:BruAb1_0406 ATP sythase protein I, hypothetical
YP_001369060.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
YP_001369061.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0
YP_001369062.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel.
YP_001369063.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.
YP_001369064.1	PFAM: NUDIX hydrolase; KEGG: rle:RL2925 putative mutator MutT protein
YP_001369065.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pfl:PFL_6201 transcriptional regulator, AsnC family
YP_001369066.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pfo:Pfl_5673 lysine exporter protein (LysE/YggA)
YP_001369067.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
YP_001369068.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bms:BR0387 hypothetical protein
YP_001369069.1	KEGG: bms:BR0388 hypothetical protein
YP_001369070.1	KEGG: bmb:BruAb1_0415 hypothetical protein
YP_001369071.1	KEGG: bmb:BruAb1_0415 hypothetical protein
YP_001369072.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_001369073.1	KEGG: bmb:BruAb1_0419 hypothetical protein
YP_001369074.1	PFAM: peptidase S49; KEGG: bms:BR0396 protease IV, putative
YP_001369075.1	exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH
YP_001369076.1	KEGG: ret:RHE_PE00140 hypothetical protein
YP_001369077.1	PFAM: methyltransferase small; KEGG: bme:BMEI1534 methyltransferase
YP_001369078.1	KEGG: bmb:BruAb1_0423 hypothetical protein
YP_001369079.1	PFAM: Polyprenyl synthetase; KEGG: bme:BMEI1532 farnesyl pyrophosphate synthetase / geranyltranstransferase
YP_001369080.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bmb:BruAb1_0425 TPR domain protein
YP_001369081.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_001369082.1	glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_001369084.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: bmb:BruAb1_0428 Sua5/YciO/YrdC family protein
YP_001369085.1	PFAM: FAD linked oxidase domain protein; KEGG: bms:BR0406 oxidoreductase, FAD-binding
YP_001369086.1	KEGG: bmb:BruAb1_0433 hypothetical protein
YP_001369087.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001369088.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bmb:BruAb1_0435 acyl-CoA dehydrogenase family protein
YP_001369089.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_001369090.1	UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin
YP_001369091.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate
YP_001369092.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: nha:Nham_2861 diguanylate cyclase (GGDEF domain)
YP_001369093.1	KEGG: bms:BR0417 hypothetical protein
YP_001369094.1	PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: bmb:BruAb1_0441 chaperone protein DnaJ, hypothetical
YP_001369095.1	Catalyzes a key regulatory step in fatty acid biosynthesis
YP_001369096.1	PFAM: Phosphoglycerate mutase; KEGG: bme:BMEI1511 phosphoglycerate mutase/fructose-2,6-bisphosphatase
YP_001369097.1	PFAM: metallophosphoesterase; KEGG: rpb:RPB_0631 metallophosphoesterase
YP_001369098.1	PFAM: protein of unknown function DUF1344; KEGG: bmb:BruAb1_0449 hypothetical protein
YP_001369099.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_001369100.1	TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: bme:BMEI1505 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_001369101.1	PFAM: histone deacetylase superfamily; KEGG: bms:BR0430 histone deacetylase family protein
YP_001369102.1	catalyzes the bidirectional exonucleolytic cleavage of DNA
YP_001369103.1	PFAM: SNARE associated Golgi protein; KEGG: bmb:BruAb1_0454 DedA family protein
YP_001369104.1	PFAM: Transglycosylase-associated protein; KEGG: bms:BR0433 transglycosylase-associated protein, putative
YP_001369105.1	PFAM: protein of unknown function DUF937; KEGG: bms:BR0434 hypothetical protein
YP_001369106.1	PFAM: Pirin domain protein; KEGG: bme:BMEI1499 pirin
YP_001369107.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_001369108.1	TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: bmb:BruAb1_0459 TlyA, hemolysin A
YP_001369109.1	PFAM: (Uracil-5)-methyltransferase; KEGG: bms:BR0438 RNA methyltransferase putative, TrmA family
YP_001369110.1	TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; KEGG: aspartate racemase
YP_001369111.1	PFAM: conserved hypothetical protein 730; KEGG: bme:BMEI1495 lysine decarboxylase
YP_001369112.1	KEGG: bmb:BruAb1_0462 hypothetical protein
YP_001369113.1	PFAM: Peptidoglycan-binding LysM; KEGG: bmb:BruAb1_0463 LysM domain protein
YP_001369114.1	PFAM: regulatory protein ArsR; KEGG: mes:Meso_0974 transcriptional regulator, ArsR family
YP_001369115.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bms:BR0442 ABC transporter, ATP-binding/permease protein
YP_001369116.1	catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine
YP_001369117.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bmb:BruAb1_0466 PssA, CDP-diacylglycerol--serine O-phosphatidyltransferase
YP_001369118.1	KEGG: bml:BMA10299_A3033 hypothetical protein
YP_001369119.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bmb:BruAb1_0467 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001369120.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
YP_001369121.1	PFAM: Colicin V production protein; KEGG: bmb:BruAb1_0470 colicin V production protein, hypothetical
YP_001369122.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_001369123.1	unwinds double stranded DNA
YP_001369124.1	PFAM: purine nucleoside permease; KEGG: pat:Patl_1764 putative purine nucleoside permease protein
YP_001369125.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bmb:BruAb1_0473 Cfa, cyclopropane-fatty-acyl-phospholipid synthase
YP_001369126.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_001369127.1	KEGG: bme:BMEI1482 hypothetical protein
YP_001369128.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_001369129.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_001369130.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: bms:BR0457 malonyl CoA-acyl carrier protein transacylase
YP_001369131.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_001369132.1	carries the fatty acid chain in fatty acid biosynthesis
YP_001369133.1	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_001369134.1	PFAM: aminodeoxychorismate lyase; KEGG: bmb:BruAb1_0484 conserved hypothetical protein TIGR00247
YP_001369135.1	PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: bms:BR0463 conserved hypothetical protein TIGR00255
YP_001369136.1	Essential for recycling GMP and indirectly, cGMP
YP_001369138.1	KEGG: sil:SPO2406 ISSpo6, transposase orf A
YP_001369139.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bme:BMEI1468 TldD protein
YP_001369140.1	PFAM: Invasion associated locus B family protein; KEGG: bmb:BruAb1_0488 hypothetical protein
YP_001369141.1	TIGRFAM: Cytochrome c oxidase subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; KEGG: bme:BMEI1466 cytochrome C oxidase polypeptide II
YP_001369142.1	TIGRFAM: Cytochrome c oxidase subunit I type; PFAM: cytochrome c oxidase subunit I; KEGG: bmb:BruAb1_0490 CoxA, cytochrome c oxidase, subunit I
YP_001369143.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_001369144.1	KEGG: bms:BR0470 hypothetical protein
YP_001369145.1	involved in the insertion of copper into subunit I of cytochrome C oxidase
YP_001369146.1	PFAM: cytochrome c oxidase subunit III; KEGG: bmb:BruAb1_0494 CoxC, cytochrome c oxidase, subunit III
YP_001369147.1	PFAM: protein of unknown function DUF983; KEGG: bms:BR0473 hypothetical protein
YP_001369148.1	PFAM: Surfeit locus 1 family protein; KEGG: bms:BR0474 SurF1 family protein
YP_001369149.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_001369150.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine
YP_001369151.1	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids
YP_001369152.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bms:BR0478 AhpC/TSA family protein
YP_001369153.1	KEGG: bmb:BruAb1_0501 hypothetical protein
YP_001369154.1	KEGG: gox:GOX2729 transposase
YP_001369155.1	PFAM: protein of unknown function DUF179; KEGG: bme:BMEI1454 transcriptional regulator, AlgH
YP_001369156.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; PAS fold-3 domain protein; KEGG: bms:BR0481 sensory box/GGDEF domain/EAL domain protein
YP_001369157.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bmb:BruAb1_0504 acetyltransferase, GNAT family
YP_001369158.1	PFAM: peptidase M16 domain protein; KEGG: bmb:BruAb1_0505 processing protease
YP_001369159.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_001369160.1	KEGG: bms:BR0486 lipoprotein, putative
YP_001369161.1	KEGG: rsp:RSP_4124 hypothetical protein
YP_001369162.1	KEGG: bmb:BruAb1_0510 hypothetical protein
YP_001369163.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bms:BR0489 hydrolase, haloacid dehalogenase-like family
YP_001369164.1	PFAM: CBS domain containing protein; Chloride channel core; KEGG: bms:BR0490 voltage gated chloride channel family protein
YP_001369165.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bms:BR0491 modification methylase BabI
YP_001369166.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bmb:BruAb1_0514 hydrolase, haloacid dehalogenase-like family
YP_001369167.1	TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; SMART: iron-sulfur cluster loop; KEGG: bme:BMEI1442 A/G-specific adenine glycosylase
YP_001369168.1	PFAM: glycosyl transferase family 25; KEGG: mes:Meso_1375 glycosyl transferase, family 25
YP_001369169.1	PFAM: O-antigen polymerase; KEGG: mes:Meso_1374 O-antigen polymerase
YP_001369170.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rfr:Rfer_0656 NAD-dependent epimerase/dehydratase
YP_001369171.1	PFAM: protein of unknown function DUF1159; KEGG: bms:BR0494 hypothetical protein
YP_001369172.1	PFAM: DSBA oxidoreductase; KEGG: bmb:BruAb1_0518 twin-arginine translocation signal domain protein
YP_001369173.1	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: bmb:BruAb1_0519 SMC family protein
YP_001369174.1	KEGG: bmb:BruAb1_0980 hypothetical protein
YP_001369175.1	KEGG: bms:BR0975 hypothetical protein
YP_001369176.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: pde:Pden_3305 filamentation induced by cAMP protein Fic
YP_001369177.1	KEGG: pde:Pden_0103 protein of unknown function DUF132
YP_001369178.1	KEGG: pde:Pden_0104 hypothetical protein
YP_001369179.1	PFAM: HicB family protein; KEGG: rso:RSc1697 hypothetical protein
YP_001369180.1	KEGG: gbe:GbCGDNIH1_1516 hypothetical protein
YP_001369182.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pen:PSEEN3285 transcriptional regulator, RipR family
YP_001369183.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bpe:BP2397 putative ABC transporter ATP-binding subunit
YP_001369184.1	PFAM: extracellular solute-binding protein family 5; KEGG: bbr:BB3712 putative binding-protein-dependent transport periplasmic protein
YP_001369185.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_3104 binding-protein-dependent transport systems inner membrane component
YP_001369186.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1382 probable transmembrane ABC transporter protein
YP_001369187.1	PFAM: peptidase M55 D-aminopeptidase; KEGG: rfr:Rfer_3107 peptidase M55, D-aminopeptidase
YP_001369188.1	PFAM: peptidase T2 asparaginase 2; KEGG: aav:Aave_1656 peptidase T2, asparaginase 2
YP_001369190.1	PFAM: Rv0623 family protein transcription factor; KEGG: fra:Francci3_0246 Rv0623-like transcription factor
YP_001369191.1	PFAM: PilT protein domain protein; KEGG: mbb:BCG_0655 hypothetical protein
YP_001369192.1	TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: mlo:mlr1577 hypothetical protein
YP_001369193.1	PFAM: transposase IS4 family protein; KEGG: mes:Meso_4308 transposase, IS4
YP_001369194.1	PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_C_689 glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein
YP_001369195.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_688 probable sugar transport inner membrane protein
YP_001369196.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_686 ABC transporter sugar permease
YP_001369197.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rpd:RPD_3148 ABC transporter related
YP_001369198.1	PFAM: metallophosphoesterase; KEGG: bms:BRA1184 purple acid phosphatase family protein
YP_001369199.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ret:RHE_CH02748 putative hydrolase protein
YP_001369200.1	PFAM: putative sugar-binding domain protein; KEGG: ret:RHE_CH02754 putative transcriptional regulator protein, DeoR family
YP_001369201.1	KEGG: bms:BR1856 hypothetical protein
YP_001369202.1	KEGG: pde:Pden_0115 YecA family protein
YP_001369204.1	VirD4 family
YP_001369205.1	PFAM: Conjugal transfer TraD family protein; KEGG: sme:SMa0930 probable TraD conjugal transfer protein
YP_001369206.1	PFAM: TraC family protein; KEGG: atc:AGR_pAT_162 hypothetical protein
YP_001369207.1	TIGRFAM: Ti-type conjugative transfer relaxase TraA; PFAM: MobA/MobL protein; KEGG: sme:SMa0934 probable TraA1 conjugal transfer protein
YP_001369208.1	KEGG: rpd:RPD_3434 hypothetical protein
YP_001369209.1	PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: mlo:mlr9540 hypothetical protein
YP_001369210.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mlo:mlr9541 cysteine synthase
YP_001369211.1	PFAM: transposase IS3/IS911 family protein; KEGG: gox:GOX2589 transposase
YP_001369212.1	PFAM: IS66 Orf2 family protein; KEGG: sme:SMb20542 putative protein in ISRm14
YP_001369213.1	PFAM: transposase IS66; KEGG: sme:SMb20541 putative protein in ISRm14
YP_001369215.1	PFAM: Transketolase central region; KEGG: sil:SPOA0319 transketolase, putative
YP_001369216.1	PFAM: protein of unknown function DUF112 transmembrane; KEGG: bja:bll0952 hypothetical protein
YP_001369217.1	KEGG: bja:blr4372 hypothetical protein
YP_001369218.1	PFAM: Uncharacterized protein UPF0065; KEGG: bbr:BB0335 hypothetical protein
YP_001369219.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mlo:mll9542 threonine synthase homolog
YP_001369220.1	PFAM: peptidase M24; KEGG: rpb:RPB_4421 peptidase M24
YP_001369221.1	PFAM: regulatory protein IclR; Helix-turn-helix type 11 domain protein; Transcriptional regulator IclR; KEGG: mes:Meso_2367 transcriptional regulator, IclR family
YP_001369222.1	PFAM: helix-turn-helix domain protein; KEGG: sil:SPOA0085 DNA-binding protein, putative
YP_001369223.1	PFAM: helix-turn-helix domain protein; KEGG: pde:Pden_3368 transcriptional regulator, XRE family
YP_001369224.1	PFAM: regulatory protein LuxR; KEGG: pat:Patl_0359 transcriptional regulator, LuxR family
YP_001369226.1	KEGG: atc:AGR_pAT_217 hypothetical protein
YP_001369227.1	KEGG: atu:Atu5161 hypothetical protein
YP_001369228.1	KEGG: sme:SMa1321 virB1 type IV secretion protein
YP_001369229.1	PFAM: VIRB2 type IV secretion fmaily protein; KEGG: sme:SMa1319 VirB2 type IV secretion protein
YP_001369230.1	PFAM: type IV secretory pathway VirB3 family protein; KEGG: atc:AGR_pAT_222 virB3 type IV secretion protein
YP_001369231.1	TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE TrbE VirB component of type IV transporter system; SMART: AAA ATPase; KEGG: sme:SMa1315 VirB4 type IV secretion protein
YP_001369232.1	TIGRFAM: P-type DNA transfer protein VirB5; PFAM: type IV secretion system family protein; KEGG: atc:AGR_pAT_224 conjugal transfer protein
YP_001369233.1	KEGG: mes:Meso_4344 hypothetical protein
YP_001369234.1	PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: atc:AGR_pAT_226 virB6 type IV secretion protein
YP_001369235.1	KEGG: atc:AGR_pAT_227 putative type IV secretion system protein VirB7
YP_001369236.1	PFAM: VirB8 family protein; KEGG: atc:AGR_pAT_228 virB8 type IV secretion protein
YP_001369237.1	TIGRFAM: P-type conjugative transfer protein VirB9; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: atc:AGR_pAT_229 virB9 type IV secretion protein
YP_001369238.1	PFAM: conjugation TrbI family protein; KEGG: sme:SMa1303 VirB10 transmembrane type IV secretion protein
YP_001369239.1	TIGRFAM: P-type DNA transfer ATPase VirB11; PFAM: type II secretion system protein E; KEGG: sme:SMa1302 VirB11 type IV secretion protein
YP_001369240.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_001369241.1	PFAM: polysaccharide deacetylase; KEGG: bmb:BruAb1_0523 hypothetical protein
YP_001369242.1	KEGG: bme:BMEI1434 hypothetical protein
YP_001369243.1	PFAM: cytochrome c class I; KEGG: pha:PSHAa1829 cytochrome c precursor
YP_001369244.1	PFAM: cytochrome c class I; KEGG: par:Psyc_1441 putative cytochrome c
YP_001369245.1	KEGG: bmb:BruAb1_0526 hypothetical protein
YP_001369246.1	PFAM: beta-lactamase domain protein; KEGG: bme:BMEI1432 hydroxyacylglutathione hydrolase
YP_001369247.1	PFAM: BioY protein; KEGG: bms:BR0506 BioY family protein
YP_001369248.1	catalyzes the formation of glyoxylate from (S)-ureidoglycolate
YP_001369249.1	TIGRFAM: Hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: bmb:BruAb1_0530 hypothetical protein
YP_001369250.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bms:BR0510 epimerase/dehydratase, putative
YP_001369251.1	PFAM: glycosyl transferase family 4; KEGG: bms:BR0511 glycosyl transferase, group 4 family protein
YP_001369252.1	PFAM: phage integrase family protein; KEGG: rpe:RPE_1075 phage integrase family protein
YP_001369253.1	KEGG: rpb:RPB_3059 hypothetical protein
YP_001369255.1	KEGG: rpe:RPE_2434 hypothetical protein
YP_001369256.1	KEGG: reh:H16_A0708 hypothetical protein
YP_001369257.1	PFAM: Integrase catalytic region; KEGG: atc:AGR_L_49 hypothetical protein
YP_001369258.1	PFAM: Integrase catalytic region; KEGG: maq:Maqu_1224 integrase, catalytic region
YP_001369259.1	PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase; KEGG: sme:SMa0776 TRm23b IS ATP-binding protein
YP_001369260.1	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: atc:AGR_L_50 hypothetical protein
YP_001369261.1	PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMa2191 hypothetical protein
YP_001369262.1	PFAM: IS66 Orf2 family protein; KEGG: pde:Pden_0067 IS66 Orf2 family protein
YP_001369263.1	PFAM: transposase IS66; KEGG: sme:SMa2171 hypothetical protein
YP_001369264.1	KEGG: sme:SMa1608 hypothetical protein
YP_001369266.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001369267.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
YP_001369268.1	KEGG: mlo:mll5590 hypothetical protein
YP_001369269.1	PFAM: TadE family protein; KEGG: mes:Meso_4097 TadE-like
YP_001369270.1	KEGG: mes:Meso_4096 hypothetical protein
YP_001369271.1	PFAM: Flp/Fap pilin component; KEGG: bmb:BruAb1_2155 pilus biosythesis protein-related protein
YP_001369272.1	PFAM: peptidase A24A prepilin type IV; KEGG: mlo:mlr5594 prepilin peptidase CpaA
YP_001369273.1	PFAM: SAF domain protein; KEGG: mlo:mlr5595 pilus assembly protein cpaB
YP_001369274.1	PFAM: type II and III secretion system protein; transport-associated; KEGG: mlo:mlr5597 exporter protein, cpaC
YP_001369275.1	TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; KEGG: mes:Meso_3998 pilus (Caulobacter type) biogenesis lipoprotein CpaD
YP_001369276.1	KEGG: mes:Meso_3999 response regulator receiver protein
YP_001369277.1	PFAM: type II secretion system protein E; KEGG: mlo:mlr5602 secretory protein kinase, cpaF
YP_001369278.1	PFAM: type II secretion system protein; KEGG: mlo:mlr5603 hypothetical protein
YP_001369279.1	PFAM: type II secretion system protein; KEGG: mlo:mlr5604 hypothetical protein
YP_001369280.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mlo:mll5605 hypothetical protein
YP_001369281.1	PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bms:BR2181 cytosol aminopeptidase family protein
YP_001369282.1	PFAM: regulatory protein MarR; KEGG: bms:BR2180 transcriptional regulator, putative
YP_001369283.1	PFAM: NLP/P60 protein; KEGG: bmb:BruAb1_2152 NLP/P60 family protein
YP_001369284.1	PFAM: alpha/beta hydrolase fold; KEGG: bmb:BruAb1_2151 hypothetical hydrolase
YP_001369285.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bms:BR2177 2-hydroxyacid dehydrogenase
YP_001369286.1	PFAM: protein of unknown function DUF1058; SMART: SH3 domain protein; KEGG: bms:BR2176 hypothetical protein
YP_001369287.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B2857 GCN5-related N-acetyltransferase
YP_001369288.1	TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: bms:BR2175 lipoprotein, YaeC family
YP_001369289.1	PFAM: ferric-uptake regulator; KEGG: bmb:BruAb1_2147 ferric uptake regulator family protein
YP_001369290.1	catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP
YP_001369291.1	FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_001369292.1	Catalyzes a key regulatory step in fatty acid biosynthesis
YP_001369293.1	PFAM: methyltransferase small; KEGG: bms:BR2170 methyltransferase
YP_001369294.1	PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; SMART: KH domain protein; KEGG: bmb:BruAb1_2142 Pnp, polyribonucleotide nucleotidyltransferase
YP_001369295.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_001369296.1	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
YP_001369297.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
YP_001369298.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_001369299.1	PFAM: protein of unknown function DUF448; KEGG: bmb:BruAb1_2137 hypothetical protein
YP_001369300.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
YP_001369301.1	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins
YP_001369302.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
YP_001369303.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_001369304.1	PFAM: helix-turn-helix domain protein; KEGG: bmb:BruAb1_2132 transcriptional regulator, Cro/CI family
YP_001369305.1	Transfers the fatty acyl group on membrane lipoproteins
YP_001369306.1	PFAM: CBS domain containing protein; transporter-associated region; KEGG: bme:BMEI1973 CBS domain containing protein
YP_001369307.1	PFAM: protein of unknown function UPF0054; KEGG: bmb:BruAb1_2129 conserved hypothetical protein TIGR00043
YP_001369308.1	PFAM: PhoH family protein; KH type 1 domain protein; KEGG: bmb:BruAb1_2128 PhoH family protein
YP_001369309.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
YP_001369310.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: bmb:BruAb1_2126 acyltransferase, hypothetical
YP_001369311.1	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: bms:BR2151 acetyltransferase, GNAT family
YP_001369312.1	PFAM: peptidase M22 glycoprotease; KEGG: bmb:BruAb1_2124 protease, hypothetical
YP_001369313.1	binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage
YP_001369314.1	PFAM: peptidase M29 aminopeptidase II; KEGG: bms:BR2148 aminopeptidase PepS
YP_001369315.1	KEGG: bms:BR2146 lipoprotein, putative
YP_001369316.1	PFAM: cell wall hydrolase SleB; KEGG: bmb:BruAb1_2120 lipoprotein, hypothetical
YP_001369317.1	TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bmb:BruAb1_2118 PhoB, phosphate regulon transcriptional regulatory protein Phob
YP_001369318.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: bmb:BruAb1_2117 PhoU, phosphate transport system regulatory protein PhoU
YP_001369319.1	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation
YP_001369320.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb1_2115 phosphate ABC transporter, permease protein
YP_001369321.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR2139 phosphate ABC transporter, permease protein
YP_001369322.1	KEGG: bmb:BruAb1_2113 phosphate ABC transporter, phosphate-binding protein
YP_001369323.1	PFAM: aminotransferase class I and II; KEGG: sme:SMc01969 hypothetical protein
YP_001369324.1	PFAM: protein of unknown function DUF454; KEGG: bmb:BruAb1_2112 hypothetical protein
YP_001369326.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: bmb:BruAb1_2110 rare lipoprotein A family protein
YP_001369327.1	PFAM: RimK domain protein ATP-grasp; KEGG: mes:Meso_0957 RimK-like ATP-grasp
YP_001369328.1	PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mlr7776 hypothetical protein
YP_001369329.1	PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: bmb:BruAb1_2108 hypothetical protein
YP_001369330.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: msm:MSMEG_2301 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001369331.1	PFAM: Phosphoglycerate mutase; KEGG: hne:HNE_1817 phosphoglycerate mutase family protein
YP_001369332.1	unwinds double stranded DNA
YP_001369333.1	TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bms:BR2132 Mg chelatase-related protein
YP_001369334.1	catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
YP_001369335.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bms:BR2130 Smp-30/Cgr1 family protein, putative
YP_001369336.1	PFAM: protein of unknown function DUF1330; KEGG: bmb:BruAb1_2104 hypothetical protein
YP_001369337.1	type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase
YP_001369338.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: mlo:mll4752 hypothetical protein
YP_001369339.1	KEGG: bme:BMEI2000 phosphatidylethanolamine N-methyltransferase / phosphatidyl-N-methylethanolamine N-methyltransferase
YP_001369340.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_001369341.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_001369342.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bme:BMEI2003 trans-1,2-dihydrobenzene-1,2-diol dehydrogenase / D-xylose 1-dehydrogenase (NADP+)
YP_001369343.1	PFAM: protein of unknown function DUF925; KEGG: mlo:mll5052 hypothetical protein
YP_001369344.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL0273 putative LysR family transcriptional regulator
YP_001369345.1	PFAM: aldo/keto reductase; KEGG: rle:RL0272 putative aldo-keto reductase/oxidoreductase
YP_001369346.1	PFAM: major facilitator superfamily MFS_1; KEGG: pae:PA3336 probable major facilitator superfamily (MFS) transporter
YP_001369347.1	PFAM: regulatory protein TetR; KEGG: vei:Veis_0960 transcriptional regulator, TetR family
YP_001369348.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
YP_001369349.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_001369350.1	KEGG: bmb:BruAb1_2096 hypothetical protein
YP_001369351.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_001369352.1	PFAM: ribosomal protein L35; KEGG: bmb:BruAb1_2094 RpmI, ribosomal protein L35
YP_001369353.1	PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bms:BR2118 nickel-cobalt-cadmium resistance protein
YP_001369354.1	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits
YP_001369355.1	KEGG: bms:BR2116 hypothetical protein
YP_001369356.1	TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; KEGG: bms:BR2115 benzoate transport protein, putative
YP_001369357.1	KEGG: bms:BR2114 hypothetical protein
YP_001369358.1	PFAM: protein of unknown function DUF45; KEGG: bmb:BruAb1_2088 hypothetical protein
YP_001369359.1	PFAM: protein of unknown function DUF218; KEGG: bme:BMEI2016 hypothetical protein
YP_001369360.1	catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis
YP_001369361.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_001369362.1	KEGG: bmb:BruAb1_2084 hypothetical protein
YP_001369363.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_001369364.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits
YP_001369365.1	TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; KEGG: bmb:BruAb1_2081 FolC, FolC bifunctional protein
YP_001369366.1	KEGG: sil:SPO2406 ISSpo6, transposase orf A
YP_001369367.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bmb:BruAb1_2080 Trx-1, thioredoxin
YP_001369368.1	TIGRFAM: Double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; KEGG: bme:BMEI2023 ATP-dependent nuclease subunit A
YP_001369369.1	TIGRFAM: Double-strand break repair protein AddB; KEGG: bmb:BruAb1_2077 hypothetical protein
YP_001369370.1	PFAM: Nucleotidyl transferase; KEGG: bms:BR2101 nucleotidyltransferase family protein
YP_001369371.1	PFAM: aminoglycoside phosphotransferase; protein of unknown function UPF0079; KEGG: bms:BR2100 conserved hypothetical protein TIGR00150
YP_001369372.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bms:BR2099 sensory box histidine kinase, putative
YP_001369373.1	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine
YP_001369374.1	PFAM: Asp/Glu racemase; KEGG: dra:DR1586 glutamate racemase
YP_001369375.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: bmb:BruAb1_2070 PtsH, phosphocarrier protein HPr
YP_001369376.1	PFAM: PTS system fructose subfamily IIA component; KEGG: bmb:BruAb1_2069 PTS system, IIA component
YP_001369377.1	KEGG: bmb:BruAb1_2067 hypothetical protein
YP_001369378.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bme:BMEI2035 sensor protein ChvG
YP_001369379.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bmb:BruAb1_2065 BvrR, DNA-binding response regulator
YP_001369380.1	PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP
YP_001369381.1	PFAM: Class I peptide chain release factor; KEGG: bmb:BruAb1_2063 hypothetical protein
YP_001369382.1	PFAM: alpha/beta hydrolase fold; KEGG: nwi:Nwi_0492 alpha/beta hydrolase fold
YP_001369383.1	catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis
YP_001369384.1	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis
YP_001369385.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_001369386.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
YP_001369387.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_001369388.1	KEGG: bmb:BruAb1_2057 hypothetical protein
YP_001369389.1	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis
YP_001369390.1	heat shock protein involved in degradation of misfolded proteins
YP_001369391.1	KEGG: mlo:mll5005 hypothetical protein
YP_001369392.1	heat shock protein involved in degradation of misfolded proteins
YP_001369393.1	PFAM: protein of unknown function DUF1402; KEGG: bms:BR2078 hypothetical protein
YP_001369394.1	PFAM: helix-turn-helix domain protein; KEGG: bms:BR2077 hypothetical protein
YP_001369395.1	PFAM: Smr protein/MutS2; KEGG: bmb:BruAb1_2051 Smr family protein
YP_001369396.1	PFAM: MltA domain protein; 3D domain protein; KEGG: bmb:BruAb1_2050 transglycosylase-related protein
YP_001369397.1	PFAM: import inner membrane translocase subunit Tim44; KEGG: bms:BR2074 hypothetical protein
YP_001369398.1	F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein
YP_001369399.1	molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA
YP_001369400.1	3'-5' exonuclease of DNA polymerase III
YP_001369401.1	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis
YP_001369402.1	AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate
YP_001369403.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
YP_001369404.1	PFAM: protein of unknown function DUF299; KEGG: bme:BMEI2060 hypothetical protein
YP_001369405.1	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
YP_001369406.1	PFAM: conserved hypothetical protein 701; KEGG: bmb:BruAb1_2040 hypothetical membrane protein
YP_001369407.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_001369408.1	PFAM: protein of unknown function DUF255; KEGG: bms:BR2063 hypothetical protein
YP_001369409.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_001369410.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_001369411.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
YP_001369412.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bms:BR2059 chromosome partitioning protein ParA
YP_001369413.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bms:BR2058 chromosome partitioning protein ParB
YP_001369414.1	required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA
YP_001369415.1	KEGG: plu:plu3797 hypothetical protein
YP_001369416.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BR2056 ABC transporter, ATP-binding protein
YP_001369417.1	PFAM: inner-membrane translocator; KEGG: bmb:BruAb1_2030 branched-chain amino acid ABC transporter, permease protein
YP_001369418.1	PFAM: protein of unknown function DUF534; KEGG: bmb:BruAb1_2028 ABC transporter, periplasmic substrate-binding protein, hypothetical
YP_001369419.1	PFAM: luciferase family protein; KEGG: bmf:BAB1_2052 bacterial luciferase
YP_001369420.1	PFAM: protein of unknown function DUF993; KEGG: bmb:BruAb1_2025 hypothetical protein
YP_001369421.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bms:BR2049 transcriptional regulator, LacI family
YP_001369422.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bmb:BruAb1_2023 oxidoreductase, Gfo/Idh/MocA family
YP_001369423.1	PFAM: coenzyme A transferase; KEGG: bms:BR2047 acetyl-CoA-transferase subunit, putative
YP_001369424.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bmb:BruAb1_2021 enoyl-CoA hydratase/isomerase family protein
YP_001369425.1	PFAM: aldehyde dehydrogenase; KEGG: bmb:BruAb1_2020 L-sorbosone dehydrogenase, NAD(P) dependent
YP_001369426.1	PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: bmb:BruAb1_2019 oxidoreductase, GMC family
YP_001369427.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_001369428.1	PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: bmb:BruAb1_2017 L-sorbose dehydrogenase, FAD dependent, hypothetical
YP_001369429.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bms:BR2040 hypothetical protein
YP_001369430.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bme:BMEI0032 3-oxoacyl-(acyl-carrier protein) reductase
YP_001369432.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:RL2994 putative transmembrane component of ABC transporter
YP_001369433.1	PFAM: phage integrase family protein; KEGG: mta:Moth_1796 phage integrase
YP_001369434.1	KEGG: ret:RHE_CH02922 hypothetical protein
YP_001369435.1	KEGG: bqu:BQ11480 hypothetical protein
YP_001369438.1	KEGG: rsp:RSP_2765 hypothetical protein
YP_001369439.1	TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: rpb:RPB_3315 phage tail tape measure protein
YP_001369441.1	KEGG: vei:Veis_0124 hypothetical protein
YP_001369442.1	PFAM: protein of unknown function DUF1130; KEGG: rle:pRL80098 hypothetical protein
YP_001369443.1	KEGG: nha:Nham_0326 hypothetical protein
YP_001369444.1	PFAM: helix-turn-helix domain protein; KEGG: sme:SMc00089 hypothetical protein
YP_001369445.1	SMART: helix-turn-helix domain protein; KEGG: mes:Meso_2258 transcriptional regulator, XRE family
YP_001369446.1	PFAM: SMF family protein; KEGG: nar:Saro_2199 smf protein
YP_001369447.1	KEGG: nar:Saro_2200 hypothetical protein
YP_001369448.1	PFAM: transposase IS66; KEGG: sme:SMa2171 hypothetical protein
YP_001369449.1	PFAM: IS66 Orf2 family protein; KEGG: pde:Pden_0067 IS66 Orf2 family protein
YP_001369450.1	PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMa2191 hypothetical protein
YP_001369451.1	TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bms:BR2037 peptidase, M20/M25/M40 family
YP_001369452.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bmb:BruAb1_2011 D-alanyl-D-alanine carboxypeptidase
YP_001369453.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bmb:BruAb1_2010 cobalamin synthesis protein/P47K family protein
YP_001369454.1	PFAM: SirA family protein; KEGG: bmb:BruAb1_2009 hypothetical protein
YP_001369455.1	PFAM: protein of unknown function DUF949; KEGG: bms:BR2033 lipoprotein, putative
YP_001369456.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein
YP_001369457.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
YP_001369458.1	KEGG: bmb:BruAb1_2005 hypothetical protein
YP_001369459.1	catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis
YP_001369460.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis
YP_001369461.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: bmb:BruAb1_2002 CBS domain protein
YP_001369462.1	PFAM: BolA family protein; KEGG: bms:BR2026 BolA protein
YP_001369463.1	PFAM: heat shock protein DnaJ domain protein; KEGG: bms:BR2024 DnaJ domain protein
YP_001369464.1	TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities AAA_5; KEGG: bmb:BruAb1_1997 cobalamin biosynthesis protein, hypothetical
YP_001369465.1	KEGG: bme:BMEI0050 CobT protein; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit; SMART: von Willebrand factor type A
YP_001369466.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pfo:Pfl_4325 short-chain dehydrogenase/reductase SDR
YP_001369467.1	TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: bmb:BruAb1_1989 hypothetical membrane protein
YP_001369468.1	required for 70S ribosome assembly
YP_001369469.1	KEGG: bms:BR2016 hypothetical protein
YP_001369470.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bmb:BruAb1_1992 transcriptional regulator, MerR family
YP_001369471.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: bms:BR2018 cadmium-translocating P-type ATPase
YP_001369472.1	KEGG: bms:BR1937 hypothetical protein
YP_001369473.1	PFAM: beta-lactamase domain protein; KEGG: bmb:BruAb1_1912 hydroxyacylglutathione hydrolase, hypothetical
YP_001369474.1	Involved in cell division; probably involved in intracellular septation
YP_001369475.1	TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; KEGG: bmb:BruAb1_1910 FtsY, signal recognition particle-docking protein
YP_001369476.1	KEGG: bmb:BruAb1_1909 hypothetical protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB
YP_001369477.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
YP_001369478.1	PFAM: outer membrane lipoprotein omp19; KEGG: bmb:BruAb1_1906 Omp19, lipoprotein Omp19
YP_001369479.1	PFAM: AFG1-family ATPase; KEGG: bms:BR1929 hypothetical protein
YP_001369480.1	Catalyzes the reversible oxidation of malate to oxaloacetate
YP_001369481.1	catalyzes the interconversion of succinyl-CoA and succinate
YP_001369482.1	Catalyzes the only substrate-level phosphorylation in the TCA cycle
YP_001369483.1	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide
YP_001369484.1	component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA
YP_001369485.1	KEGG: bms:BR1921 hypothetical protein
YP_001369486.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bmb:BruAb1_1896 transporter, LysE family
YP_001369487.1	KEGG: bmb:BruAb1_1895 hypothetical protein
YP_001369488.1	Catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_001369491.1	PFAM: GumN family protein; KEGG: bmb:BruAb1_1893 hypothetical protein
YP_001369492.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
YP_001369493.1	Essential for efficient processing of 16S rRNA
YP_001369494.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
YP_001369495.1	KEGG: mlo:mlr5572 hypothetical protein
YP_001369496.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_001369497.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
YP_001369498.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mlo:mll4270 hypothetical protein
YP_001369500.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bmb:BruAb1_1881 acetyltransferase, GNAT family
YP_001369501.1	TIGRFAM: Succinate dehydrogenase cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bmb:BruAb1_1880 SdhC, succinate dehydrogenase, cytochrome b556 subunit
YP_001369502.1	TIGRFAM: Succinate dehydrogenase hydrophobic membrane anchor; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bmb:BruAb1_1879 succinate dehydrogenase, hydrophobic membrane anchor protein
YP_001369503.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
YP_001369504.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase
YP_001369505.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bms:BR1900 glyoxalase family protein
YP_001369506.1	PFAM: OsmC family protein; KEGG: mlo:mlr4254 osmotically inducible protein C, putative ATP/GTP binding protein
YP_001369507.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bms:BR1899 UbiH/COQ6 monooxygenase family
YP_001369508.1	TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; KEGG: bme:BMEI0166 acyl-CoA thioesterase II
YP_001369509.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: bme:BMEI0167 ammonium transporter
YP_001369510.1	PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: bms:BR1895 cell division protein FtsK, putative
YP_001369511.1	PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: bms:BR2003 hypothetical protein
YP_001369512.1	TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bms:BR2004 exodeoxyribonuclease III
YP_001369513.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hne:HNE_0950 ABC transporter, ATP-binding protein
YP_001369514.1	PFAM: cyclic nucleotide-binding; KEGG: bms:BR2005 cyclic nucleotide-binding protein
YP_001369515.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bmb:BruAb1_1981 DNA-binding response regulator
YP_001369516.1	KEGG: bme:BMEI0065 hypothetical cytosolic protein
YP_001369517.1	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: pen:PSEEN0801 xanthine/uracil permease
YP_001369518.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bmf:BAB1_1894 bacterial regulatory protein, GntR family:aminotransferase, class I and II
YP_001369519.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bms:BR1893 hypothetical protein
YP_001369520.1	KEGG: bms:BR1892 hypothetical protein
YP_001369521.1	PFAM: protein of unknown function DUF55; KEGG: bmb:BruAb1_1868 hypothetical protein
YP_001369522.1	unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity
YP_001369523.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
YP_001369524.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_001369525.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
YP_001369526.1	catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane
YP_001369527.1	KEGG: bms:BR1885 hypothetical protein
YP_001369528.1	PFAM: HemY domain protein; KEGG: bmb:BruAb1_1861 hypothetical protein
YP_001369529.1	PFAM: protein of unknown function DUF1332; KEGG: bms:BR1882 hypothetical protein
YP_001369530.1	PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: bme:BMEI0181 macrolide-efflux protein
YP_001369531.1	porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure
YP_001369532.1	KEGG: bmf:BAB1_1999 hypothetical protein
YP_001369534.1	TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_1972 FtsE, cell division ABC transporter, ATP-binding protein
YP_001369535.1	PFAM: protein of unknown function DUF214; KEGG: bms:BR1996 membrane protein, putative
YP_001369536.1	PFAM: protein of unknown function DUF218; KEGG: bme:BMEI0074 hypothetical protein
YP_001369537.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: bms:BR1994 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative
YP_001369538.1	catalyzes the hydrolysis of pyrophosphate to phosphate
YP_001369539.1	PFAM: protein of unknown function YGGT; KEGG: bmb:BruAb1_1967 YGGT family protein
YP_001369540.1	PFAM: ChaC family protein; KEGG: bmb:BruAb1_1966 cation transport protein, hypothetical
YP_001369541.1	KEGG: bmb:BruAb1_1965 hypothetical protein
YP_001369542.1	dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate
YP_001369543.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
YP_001369544.1	PFAM: Methyltransferase type 11; KEGG: bmb:BruAb1_1962 hypothetical protein
YP_001369545.1	TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: bmb:BruAb1_1961 Hpt, hypoxanthine phosphoribosyltransferase
YP_001369546.1	KEGG: bmb:BruAb1_1960 hypothetical protein
YP_001369547.1	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bmb:BruAb1_1959 LysA, diaminopimelate decarboxylase
YP_001369548.1	KEGG: bmb:BruAb1_1958 hypothetical protein
YP_001369549.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_001369550.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bmb:BruAb1_1956 thiol:disulfide interchange protein, hypothetical
YP_001369551.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mlo:mlr5029 hypothetical protein
YP_001369552.1	PFAM: protein of unknown function DUF188; KEGG: bms:BR1979 hypothetical protein
YP_001369553.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: mlo:mlr3480 hypothetical protein
YP_001369554.1	TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: bmb:BruAb1_1954 ribonuclease BN, hypothetical
YP_001369555.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bms:BR1977 short chain dehydrogenase
YP_001369556.1	KEGG: bmb:BruAb1_1952 hypothetical protein
YP_001369557.1	TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: bms:BR1975 ATP:cob(I)alamin adenosyltransferase, putative
YP_001369558.1	PFAM: Radical SAM domain protein; KEGG: bmb:BruAb1_1950 hypothetical radical activating enzyme
YP_001369559.1	PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: bmb:BruAb1_1949 hypothetical 6-pyruvoyl tetrahydrobiopterin synthase
YP_001369560.1	TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: bmb:BruAb1_1948 ExsB protein
YP_001369561.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bms:BR1971 electron transfer flavoprotein, beta subunit
YP_001369562.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: bmb:BruAb1_1946 EtfA, electron transfer flavoprotein, alpha subunit
YP_001369563.1	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA
YP_001369564.1	KEGG: bms:BR1968 hypothetical protein
YP_001369565.1	TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bme:BMEI0101 cysteine synthase A
YP_001369566.1	PFAM: UspA domain protein; KEGG: bmb:BruAb1_1942 universal stress protein family
YP_001369567.1	catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine
YP_001369568.1	PFAM: sulfatase; protein of unknown function DUF1705; KEGG: bms:BR1948 membrane protein, putative
YP_001369569.1	KEGG: bmb:BruAb1_1923 hypothetical protein
YP_001369570.1	PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: mes:Meso_3018 polysaccharide biosynthesis protein
YP_001369571.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
YP_001369572.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bms:BR1943 peptidyl-prolyl cis-trans isomerase
YP_001369573.1	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate
YP_001369574.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bms:BR1940 acetyltransferase, GNAT family
YP_001369575.1	TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: bms:BR1939 mutator mutT protein, putative
YP_001369576.1	KEGG: bmb:BruAb1_1914 hypothetical protein
YP_001369577.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bms:BR1879 hypothetical protein
YP_001369578.1	KEGG: bms:BR1878 competence protein F, putative
YP_001369579.1	TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: bmb:BruAb1_1855 GrxC, glutaredoxin 3
YP_001369580.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bmb:BruAb1_1854 carbon-nitrogen hydrolase family protein
YP_001369581.1	PFAM: protein of unknown function DUF1178; KEGG: bmb:BruAb1_1853 hypothetical protein
YP_001369582.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bme:BMEI0187 transporter, DME family
YP_001369583.1	Involved in ubiquinone biosynthesis
YP_001369584.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.
YP_001369585.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: bmb:BruAb1_1849 PtsP, phosphoenolpyruvate-protein phosphotransferase
YP_001369586.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_001369587.1	TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: bmb:BruAb1_1847 HemK
YP_001369588.1	KEGG: bms:BR1865 hypothetical protein
YP_001369589.1	PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: bmb:BruAb1_1843 ClpB, ATP-dependent Clp protease, ATP-binding subunit ClpB
YP_001369590.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bms:BR1862 hypothetical protein
YP_001369591.1	PFAM: peptidase M23B; KEGG: bms:BR1861 peptidase, M23/M37 family
YP_001369592.1	PFAM: GCN5-related N-acetyltransferase; KEGG: aha:AHA_3264 putative acetyltransferase
YP_001369593.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: hne:HNE_2304 MATE efflux family protein
YP_001369594.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: atc:AGR_L_374gl hypothetical protein
YP_001369595.1	PFAM: protein of unknown function DUF548; KEGG: atc:AGR_L_1626 hypothetical protein
YP_001369596.1	PFAM: pseudouridine synthase; KEGG: atc:AGR_L_1625 ribosomal large subunit pseudouridine synthase A
YP_001369597.1	PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: sil:SPO2980 porphyromonas-type peptidyl-arginine deiminase family protein
YP_001369598.1	KEGG: sil:SPO2979 hypothetical protein
YP_001369599.1	PFAM: ribosomal protein L21; KEGG: bms:BR1850 ribosomal protein L21
YP_001369600.1	involved in the peptidyltransferase reaction during translation
YP_001369601.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bmb:BruAb1_1827 acetyltransferase, GNAT family
YP_001369602.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bms:BR1847 acetyltransferase, GNAT family
YP_001369603.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
YP_001369604.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_001369605.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_001369606.1	transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria
YP_001369607.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: bme:BMEI0210 iojap protein family
YP_001369608.1	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
YP_001369610.1	PFAM: peptidase M23B; KEGG: bmb:BruAb1_1817 hypothetical protein
YP_001369611.1	TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: bmb:BruAb1_1816 carboxyl-terminal protease
YP_001369612.1	PFAM: protein of unknown function DUF610 YibQ; KEGG: mes:Meso_3450 protein of unknown function DUF610, YibQ
YP_001369613.1	hydrolyzes diadenosine polyphosphate
YP_001369614.1	PFAM: Transglycosylase-associated protein; KEGG: bmf:BAB1_1843 transglycosylase-associated protein
YP_001369615.1	PFAM: protein of unknown function DUF1275; KEGG: bmb:BruAb1_1813 hypothetical membrane protein
YP_001369616.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmb:BruAb1_1812 transcriptional regulator, LysR family
YP_001369617.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: bmb:BruAb1_1811 MmsA, methylmalonic acid semialdehyde dehydrogenase
YP_001369618.1	KEGG: bja:bll1287 hypothetical protein
YP_001369619.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mxa:MXAN_3170 oxidoreductase, zinc-binding dehydrogenase family
YP_001369620.1	KEGG: bmb:BruAb1_1810 hypothetical protein
YP_001369621.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal
YP_001369622.1	KEGG: mlo:mlr4134 hypothetical protein
YP_001369623.1	PFAM: carbonic anhydrase; KEGG: bme:BMEI0222 carbonic anhydrase
YP_001369624.1	TIGRFAM: lytic murein transglycosylase; KEGG: bms:BR1828 lytic murein transglycosylase, putative
YP_001369625.1	PFAM: L-lactate permease; KEGG: csa:Csal_2686 L-lactate transport
YP_001369626.1	TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; KEGG: bms:BR1826 signal recognition particle protein
YP_001369627.1	catalyzes the interconversion of chorismate to prephenate
YP_001369628.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
YP_001369629.1	PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: mlo:mlr8209 hypothetical protein
YP_001369630.1	PFAM: LemA family protein; KEGG: bms:BR1822 lemA protein, putative
YP_001369631.1	PFAM: protein of unknown function DUF477; KEGG: bms:BR1821 hypothetical protein
YP_001369632.1	PFAM: protein of unknown function DUF477; KEGG: bms:BR1820 hypothetical protein
YP_001369633.1	PFAM: NAD-glutamate dehydrogenase; KEGG: bms:BR1819 hypothetical protein
YP_001369634.1	PFAM: major facilitator superfamily MFS_1; KEGG: bme:BMEI0232 transporter
YP_001369635.1	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: aau:AAur_2247 glycerol kinase
YP_001369636.1	involved in de novo purine biosynthesis
YP_001369637.1	PFAM: Heparinase II/III family protein; KEGG: bmb:BruAb1_1795 hypothetical protein
YP_001369638.1	PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: bmb:BruAb1_1794 Sun, sun protein
YP_001369639.1	putative metalloprotease
YP_001369640.1	PFAM: protein of unknown function DUF1674; KEGG: bmb:BruAb1_1792 hypothetical protein
YP_001369641.1	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
YP_001369642.1	PFAM: Usg family protein; KEGG: bmb:BruAb1_1790 hypothetical usg protein
YP_001369643.1	PFAM: alanine racemase domain protein; KEGG: bms:BR1808 conserved hypothetical protein TIGR00044
YP_001369644.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_001369645.1	KEGG: bmb:BruAb1_1786 hypothetical protein
YP_001369646.1	PFAM: beta-lactamase domain protein; KEGG: rle:pRL100329 hypothetical protein
YP_001369647.1	KEGG: sme:SMc02491 hypothetical protein
YP_001369648.1	similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity
YP_001369649.1	binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity
YP_001369650.1	KEGG: bmb:BruAb1_1783 hypothetical protein
YP_001369651.1	Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex
YP_001369652.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_001369653.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
YP_001369654.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_001369655.1	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane
YP_001369656.1	PFAM: regulatory protein MarR; KEGG: bmb:BruAb1_1776 transcriptional regulator, MarR family
YP_001369657.1	TIGRFAM: nitrite reductase, copper-containing; PFAM: multicopper oxidase type 3; KEGG: pna:Pnap_1326 nitrite reductase, copper-containing
YP_001369658.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bmb:BruAb1_1775 transcriptional regulator, GntR family
YP_001369659.1	PFAM: FAD dependent oxidoreductase; KEGG: bmb:BruAb1_1774 D-amino acid dehydrogenase small subunit
YP_001369660.1	PFAM: proline racemase; KEGG: bms:BR1792 proline racemase, putative
YP_001369661.1	PFAM: inner-membrane translocator; KEGG: bms:BR1791 branched-chain amino acid ABC transporter, permease protein
YP_001369662.1	PFAM: inner-membrane translocator; KEGG: bmb:BruAb1_1771 branched-chain amino acid ABC transporter, permease protein
YP_001369663.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BR1789 branched-chain amino acid ABC transporter, ATP-binding protein
YP_001369664.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_1769 branched-chain amino acid ABC transporter, ATP-binding protein
YP_001369665.1	KEGG: bmb:BruAb1_1768 hypothetical protein
YP_001369666.1	PFAM: Extracellular ligand-binding receptor; KEGG: bms:BR1785 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative
YP_001369667.1	PFAM: Extracellular ligand-binding receptor; KEGG: bms:BR1782 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative
YP_001369668.1	biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate
YP_001369669.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: sme:SMc03890 putative transcription regulator protein
YP_001369670.1	PFAM: major facilitator superfamily MFS_1; KEGG: bme:BMEI0267 membrane protein MOSC
YP_001369671.1	TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bms:BR1779 D-beta-hydroxybutyrate dehydrogenase, putative
YP_001369672.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_001369673.1	PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMa1959 hypothetical protein
YP_001369674.1	PFAM: helix-turn-helix HxlR type; KEGG: pfl:PFL_3943 hypothetical protein
YP_001369675.1	PFAM: Polyprenyl synthetase; KEGG: bmb:BruAb1_1760 IspA, geranyltranstransferase
YP_001369676.1	glycosyltransferase; polymerizes glycan strands in the peptidoglycan
YP_001369677.1	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: bmb:BruAb1_1758 RpmF, ribosomal protein L32
YP_001369678.1	PFAM: protein of unknown function DUF336; KEGG: bmb:BruAb1_1757 hypothetical protein
YP_001369679.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis
YP_001369680.1	PFAM: helicase domain protein; KEGG: bmb:BruAb1_1754 ATP-dependent helicase
YP_001369681.1	PFAM: RNA-binding S4 domain protein; KEGG: bmb:BruAb1_1753 S4 domain protein
YP_001369682.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bmb:BruAb1_1751 FdxA, ferredoxin A
YP_001369683.1	PFAM: transcription factor CarD; KEGG: bmb:BruAb1_1750 hypothetical transcriptional regulator
YP_001369684.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bja:blr3992 transcriptional regulatory protein
YP_001369685.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sus:Acid_6587 short-chain dehydrogenase/reductase SDR
YP_001369686.1	binds with the catalytic core of RNA polymerase to produce the holoenzyme; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma-32 is responsible for the expression of heat shock promoters; there are paralogs in Rhizobium and Sinorhizobium; the proteins in this cluster act as secondary heat shock sigma factors; the Rhizobium sigma-32 factor may also be involved in exopolysaccharide production
YP_001369687.1	PFAM: MOSC domain containing protein; KEGG: bms:BR1762 MOSC domain protein
YP_001369688.1	PFAM: peptidase M48 Ste24p; KEGG: bmb:BruAb1_1746 hypothetical peptidase
YP_001369689.1	TIGRFAM: ABC transporter, ATPase subunit, ThiQ subfamily; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BR1759 thiamine ABC transporter, ATP-binding protein, putative
YP_001369690.1	permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine
YP_001369691.1	part of the thiamine and TPP transport system tbpA-thiPQ
YP_001369692.1	TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: bmb:BruAb1_1741 hypothetical protein
YP_001369693.1	PFAM: 17 kDa surface antigen; KEGG: bmb:BruAb1_1740 lipoprotein, hypothetical
YP_001369694.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BR1753 ABC transporter, ATP-binding protein
YP_001369695.1	PFAM: aldo/keto reductase; KEGG: aav:Aave_3016 aldo/keto reductase
YP_001369698.1	PFAM: phage integrase family protein
YP_001369700.1	KEGG: syf:Synpcc7942_0761 hypothetical protein
YP_001369701.1	KEGG: rpe:RPE_3548 hypothetical protein
YP_001369703.1	KEGG: rpe:RPE_2440 hypothetical protein
YP_001369704.1	PFAM: metallophosphoesterase; KEGG: ajs:Ajs_0506 metallophosphoesterase
YP_001369705.1	KEGG: bch:Bcen2424_0194 hypothetical protein
YP_001369706.1	KEGG: bch:Bcen2424_0193 hypothetical protein
YP_001369707.1	KEGG: bch:Bcen2424_0192 hypothetical protein
YP_001369708.1	KEGG: atc:AGR_L_2151 hypothetical protein
YP_001369709.1	KEGG: bme:BMEI0289 hypothetical cytosolic protein
YP_001369710.1	PFAM: N-formylglutamate amidohydrolase; KEGG: bms:BR1750 hypothetical protein
YP_001369711.1	PFAM: protein of unknown function DUF1036; KEGG: bmb:BruAb1_1734 hypothetical protein
YP_001369712.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_001369713.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bmb:BruAb1_1732 TPR domain protein
YP_001369714.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif
YP_001369715.1	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway
YP_001369716.1	TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: bmb:BruAb1_1729 PurE, phosphoribosylaminoimidazole carboxylase, catalytic subunit
YP_001369717.1	PFAM: protein of unknown function DUF465; KEGG: bmb:BruAb1_1728 hypothetical protein
YP_001369718.1	PFAM: protein of unknown function DUF465; KEGG: bmb:BruAb1_1726 hypothetical protein
YP_001369719.1	PFAM: major facilitator superfamily MFS_1; KEGG: bms:BR1740 transporter, putative
YP_001369720.1	PFAM: protein of unknown function DUF1192; KEGG: bmb:BruAb1_1724 hypothetical protein
YP_001369721.1	TIGRFAM: Quinone oxidoreductase putative PIG3; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bme:BMEI0302 quinone oxidoreductase
YP_001369722.1	PFAM: protein of unknown function DUF1013; KEGG: bmb:BruAb1_1722 hypothetical protein
YP_001369725.1	PFAM: Invasion associated locus B family protein; KEGG: bmb:BruAb1_0366 invasion protein B
YP_001369726.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bmb:BruAb1_1719 hypothetical transcriptional regulator
YP_001369727.1	KEGG: bmb:BruAb1_1718 hypothetical protein
YP_001369728.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mes:Meso_3434 short-chain dehydrogenase/reductase SDR
YP_001369729.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bmf:BAB1_1744 AMP-dependent synthetase and ligase
YP_001369730.1	KEGG: bme:BMEI0308 hypothetical protein
YP_001369731.1	PFAM: fructose-bisphosphate aldolase class-I; KEGG: mes:Meso_3436 fructose-bisphosphate aldolase, class-I
YP_001369732.1	PFAM: glucose sorbosone dehydrogenase; KEGG: sus:Acid_1883 glucose sorbosone dehydrogenase
YP_001369733.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
YP_001369734.1	PFAM: protein of unknown function DUF1089; KEGG: sme:SMc03980 hypothetical protein
YP_001369735.1	TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: bms:BR1728 glyceraldehyde 3-phosphate dehydrogenase
YP_001369736.1	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase
YP_001369737.1	KEGG: bmb:BruAb1_1710 hypothetical protein
YP_001369738.1	PFAM: protein of unknown function DUF710; KEGG: bmb:BruAb1_1709 hypothetical protein
YP_001369739.1	KEGG: aba:Acid345_1846 hypothetical protein
YP_001369740.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: bmb:BruAb1_1708 5-formyltetrahydrofolate cyclo-ligase family protein
YP_001369741.1	PFAM: metallophosphoesterase; KEGG: bms:BR1722 conserved hypothetical protein TIGR00282
YP_001369742.1	PFAM: Integral membrane protein TerC; KEGG: bms:BR1721 hypothetical protein
YP_001369743.1	PFAM: protein of unknown function DUF1284; KEGG: bms:BR1720 hypothetical protein
YP_001369744.1	PFAM: BioY protein; KEGG: bmb:BruAb1_1704 BioY family protein
YP_001369745.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bme:BMEI0320 transcriptional regulator, GntR family
YP_001369746.1	PFAM: protein of unknown function DUF28; KEGG: bmb:BruAb1_1702 hypothetical protein
YP_001369747.1	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
YP_001369748.1	TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bme:BMEI0323 probable transport ATP-binding protein MsbA
YP_001369749.1	PFAM: OmpA/MotB domain protein; KEGG: bmb:BruAb1_1699 OmpA family protein
YP_001369750.1	KEGG: bmb:BruAb1_1698 hypothetical protein
YP_001369751.1	PFAM: inositol monophosphatase; KEGG: bme:BMEI0326 myo-inositol-1(or 4)-monophosphatase
YP_001369752.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_001369753.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: bms:BR1708 hypothetical protein
YP_001369754.1	catalyzes the formation of thiamine monophosphate from 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate and 4-methyl-5-(2-phosphono-oxyethyl)-thiazole
YP_001369755.1	KEGG: bmb:BruAb1_1691 hypothetical OpgC protein
YP_001369756.1	PFAM: protein of unknown function DUF1465; KEGG: bme:BMEI0331 hypothetical protein
YP_001369757.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
YP_001369758.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
YP_001369759.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_001369760.1	PFAM: thioesterase superfamily protein; KEGG: bmb:BruAb1_1686 hypothetical protein
YP_001369761.1	TIGRFAM: Tol-Pal system TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: bmb:BruAb1_1685 TolQ, TolQ protein
YP_001369762.1	TIGRFAM: Biopolymer transport TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bmb:BruAb1_1684 TonB system transport protein, ExbD/TolR family
YP_001369763.1	KEGG: bms:BR1698 TolA protein
YP_001369764.1	forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA
YP_001369766.1	TIGRFAM: Peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: bmb:BruAb1_1680 lipoprotein, Pal family
YP_001369767.1	TIGRFAM: Tol-Pal system YbgF; KEGG: bmb:BruAb1_1678 hypothetical protein
YP_001369768.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: bmb:BruAb1_1677 hypothetical protein
YP_001369769.1	KEGG: bme:BMEI0343 cell division protein FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001369770.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YP_001369771.1	PFAM: surface antigen msp4 family protein; porin opacity type; KEGG: bms:BR1689 outer surface protein
YP_001369772.1	KEGG: mlo:mll3877 hypothetical protein
YP_001369773.1	PFAM: Bile acid:sodium symporter; KEGG: bmb:BruAb1_1673 sodium/bile acid transporter family protein
YP_001369774.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate
YP_001369775.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_001369776.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bmb:BruAb1_1669 acetyltransferase, GNAT family
YP_001369777.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_001369778.1	KEGG: bms:BR1681 hypothetical protein
YP_001369779.1	PFAM: Inorganic pyrophosphatase; KEGG: csa:Csal_2390 inorganic diphosphatase
YP_001369780.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: ftrA; transcriptional activator FtrA
YP_001369781.1	PFAM: Rhodanese domain protein; KEGG: bte:BTH_II1761 rhodanese-like domain protein
YP_001369782.1	binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters
YP_001369783.1	TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bmb:BruAb1_1639 ribosomal large subunit pseudouridine synthase, RluD subfamily
YP_001369784.1	KEGG: bms:BR1652 hypothetical protein
YP_001369788.1	KEGG: bmb:BruAb2_0788 hypothetical protein
YP_001369789.1	PFAM: ferric-uptake regulator; KEGG: bmb:BruAb1_1641 hypothetical ferric uptake regulation protein
YP_001369790.1	PFAM: HWE histidine kinase; KEGG: bmb:BruAb1_1642 sensor histidine kinase, hypothetical
YP_001369791.1	PFAM: protein of unknown function DUF1328; KEGG: bmb:BruAb1_1643 hypothetical protein
YP_001369792.1	in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media
YP_001369793.1	KEGG: rle:RL3704 hypothetical protein
YP_001369794.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_001369795.1	PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: bmb:BruAb1_1646 sensor histidine kinase
YP_001369796.1	KEGG: bms:BR1660 hypothetical protein
YP_001369797.1	KEGG: bmb:BruAb1_1648 hypothetical protein
YP_001369798.1	PFAM: PRC-barrel domain protein; KEGG: bmb:BruAb1_1649 hypothetical protein
YP_001369799.1	KEGG: bmb:BruAb1_1651 hypothetical protein
YP_001369800.1	TIGRFAM: TonB-system energizer ExbB type-1; PFAM: MotA/TolQ/ExbB proton channel; KEGG: bmb:BruAb1_1653 ExbB, biopolymer transport protein ExbB
YP_001369801.1	TIGRFAM: TonB system transport protein ExbD type-1; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bms:BR1667 TonB system transport protein ExbD
YP_001369802.1	TIGRFAM: TonB family protein; KEGG: bms:BR1668 TonB-dependent receptor
YP_001369803.1	KEGG: rle:RL2991 hypothetical protein
YP_001369804.1	PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: sme:SMc04351 probable transmembrane ATP-binding ABC transporter protein
YP_001369805.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bmb:BruAb1_1658 HlyD family secretion protein
YP_001369806.1	PFAM: TadE family protein; KEGG: mlo:mll7596 hypothetical protein
YP_001369807.1	KEGG: atu:Atu1609 hypothetical protein
YP_001369808.1	catalyzes the formation of dUMP from dUTP
YP_001369809.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: bmb:BruAb1_1661 transcriptional regulator, AsnC family
YP_001369810.1	KEGG: bms:BR1677 hypothetical protein
YP_001369811.1	PFAM: glutamine amidotransferase class-II; KEGG: bms:BR1678 glutamine amidotransferase, putative
YP_001369812.1	PFAM: Rubrerythrin; protein of unknown function DUF125 transmembrane; KEGG: bms:BR1679 hypothetical protein
YP_001369813.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bme:BMEI0353 proline/betaine transporter
YP_001369814.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bmb:BruAb1_1637 acetyltransferase, GNAT family
YP_001369815.1	catalyzes the formation of malate from glyoxylate and acetyl-CoA
YP_001369816.1	this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu
YP_001369817.1	PFAM: HhH-GPD family protein; KEGG: bmb:BruAb1_1634 base-excision DNA repair protein
YP_001369818.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: bms:BR1643 HNH endonuclease family protein
YP_001369819.1	KEGG: bms:BR1642 disulfide bond formation protein B, putative
YP_001369820.1	KEGG: bmb:BruAb1_1629 hypothetical membrane protein
YP_001369821.1	TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: bmb:BruAb1_1628 GabD, succinate-semialdehyde dehydrogenase
YP_001369822.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bmb:BruAb1_1627 transcriptional regulator, IclR family
YP_001369823.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pau:PA14_49790 probable transcriptional regulator
YP_001369824.1	PFAM: aldo/keto reductase; KEGG: pfo:Pfl_0252 aldo/keto reductase
YP_001369825.1	PFAM: polysaccharide deacetylase; KEGG: atc:AGR_L_1972 hypothetical protein
YP_001369826.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bme:BMEII0280 multidrug resistance protein B
YP_001369827.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbr:BB1163 putative membrane transport protein
YP_001369828.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bbr:BB1162 hypothetical protein
YP_001369829.1	PFAM: Ankyrin; KEGG: bur:Bcep18194_B0071 ankyrin repeat protein
YP_001369830.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pau:PA14_49640 probable transcriptional regulator
YP_001369831.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bme:BMEII0281 transcriptional regulator, GntR family
YP_001369832.1	PFAM: aldehyde dehydrogenase; KEGG: bms:BRA1014 aldehyde dehydrogenase family protein
YP_001369833.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_001369834.1	PFAM: extracellular solute-binding protein family 5; KEGG: bms:BRA1012 ABC transporter, periplasmic substrate-binding protein
YP_001369835.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA1011 peptide ABC transporter, permease protein
YP_001369836.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0950 peptide ABC transporter, permease protein
YP_001369837.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bms:BRA1009 peptide ABC transporter, ATP-binding protein
YP_001369838.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bmb:BruAb2_0948 peptide ABC transporter, ATP-binding protein
YP_001369839.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
YP_001369840.1	3'-5' exonuclease of DNA polymerase III
YP_001369841.1	catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate
YP_001369842.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bms:BRA1004 GGDEF domain protein
YP_001369843.1	KEGG: bms:BRA1003 hypothetical protein
YP_001369844.1	PFAM: Glutathione S-transferase domain; KEGG: bmb:BruAb2_0232 hypothetical glutathione S-transferase
YP_001369847.1	PFAM: helix-turn-helix domain protein; KEGG: rle:pRL120561A putative transcriptional regulator
YP_001369849.1	KEGG: bcz:pE33L466_0422 possible membrane protein
YP_001369850.1	KEGG: eca:ECA1056 putative phage-related reverse transcriptase/maturase family protein
YP_001369851.1	KEGG: eca:ECA1057 phage-related hypothetical protein
YP_001369852.1	PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: atc:AGR_L_1981 hypothetical protein
YP_001369856.1	KEGG: rde:RD1_2485 hypothetical protein
YP_001369857.1	KEGG: bms:BRA1070 hypothetical protein
YP_001369858.1	this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress
YP_001369859.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pfo:Pfl_3728 GCN5-related N-acetyltransferase
YP_001369860.1	PFAM: SlyX family protein; KEGG: bms:BRA1068 SlyX protein, putative
YP_001369861.1	KEGG: atc:AGR_C_215 hypothetical 25.1 kDa protein in CobV 5'region (orf1)
YP_001369862.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
YP_001369863.1	Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone
YP_001369864.1	TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: bmb:BruAb2_1005 UbiB
YP_001369865.1	catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; in the alphaproteobacteria, this protein contains an N-terminal SbtC-like domain
YP_001369866.1	PFAM: aminoglycoside phosphotransferase; KEGG: sme:SMc03094 putative aminoglycoside 3'-phosphotransferase protein
YP_001369867.1	TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: bms:BRA1063 peptide chain release factor 3
YP_001369868.1	KEGG: bms:BRA1061 hypothetical protein
YP_001369869.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: bms:BRA1060 cardiolipin synthase
YP_001369870.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bmb:BruAb2_0999 endonuclease/exonuclease/phosphatase family protein
YP_001369871.1	PFAM: aldehyde dehydrogenase; acyl-CoA reductase; KEGG: bms:BRA1058 aldehyde dehydrogenase family protein
YP_001369872.1	PFAM: YhhN family protein; KEGG: bme:BMEII0243 hypothetical protein
YP_001369873.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: mlo:mlr2503 hypothetical protein
YP_001369874.1	TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: bmb:BruAb2_0994 nitroreductase family protein
YP_001369875.1	catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate
YP_001369876.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
YP_001369877.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bme:BMEII0250 ABC transporter ATP-binding protein
YP_001369878.1	catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate
YP_001369879.1	catalyzes the formation of methylglyoxal from glycerone phosphate
YP_001369880.1	D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm
YP_001369881.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc00744 putative transport protein transmembrane
YP_001369882.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: bmb:BruAb2_0986 hypothetical protein
YP_001369883.1	PFAM: HEAT domain containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: bmb:BruAb2_0985 hypothetical iron-sulfur cluster-binding protein
YP_001369884.1	PFAM: Glutathione S-transferase domain; KEGG: bmb:BruAb2_0984 glutathione S-transferase family protein
YP_001369885.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
YP_001369886.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: bmf:BAB2_1002 NADH-ubiquinone oxidoreductase 39 kd subunit
YP_001369887.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_001369888.1	TIGRFAM: conserved hypothetical selenoprotein; PFAM: Selenoprotein W-related; KEGG: bmb:BruAb2_0977 hypothetical protein
YP_001369889.1	PFAM: protein of unknown function DUF195; KEGG: bms:BRA1036 hypothetical protein
YP_001369890.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_001369891.1	modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth
YP_001369892.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_001369893.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rle:RL1257 putative quinone oxidoreductase
YP_001369894.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ret:RHE_CH01125 probable transcriptional regulator protein, LysR family
YP_001369895.1	KEGG: bmb:BruAb2_0972 hypothetical membrane protein
YP_001369896.1	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.
YP_001369897.1	PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: bms:BRA1029 hypothetical protein
YP_001369898.1	KEGG: bmb:BruAb1_0415 hypothetical protein
YP_001369899.1	KEGG: bms:BR0389 hypothetical protein
YP_001369900.1	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway
YP_001369901.1	PFAM: conserved hypothetical protein 730; KEGG: bmb:BruAb2_0967 conserved hypothetical protein TIGR00730, hypothetical
YP_001369902.1	PFAM: protein of unknown function DUF817; KEGG: art:Arth_3567 protein of unknown function DUF817
YP_001369903.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bmb:BruAb2_0966 hydrolase, haloacid dehalogenase-like family
YP_001369904.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
YP_001369905.1	KEGG: bxe:Bxe_A0110 hypothetical protein
YP_001369906.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_001369907.1	functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria
YP_001369908.1	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates
YP_001369909.1	in Escherichia coli transcription of this gene is enhanced by polyamines
YP_001369910.1	PFAM: protein of unknown function DUF1486; KEGG: bxe:Bxe_B0561 hypothetical protein
YP_001369911.1	PFAM: Endoribonuclease L-PSP; KEGG: bms:BRA1019 hypothetical protein
YP_001369912.1	KEGG: bms:BRA1018 hypothetical protein
YP_001369913.1	in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme
YP_001369914.1	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ
YP_001369915.1	KEGG: bms:BRA0989 hypothetical protein
YP_001369916.1	PFAM: protein of unknown function DUF1287; KEGG: sfu:Sfum_0280 protein of unknown function DUF1287
YP_001369918.1	KEGG: bms:BRA0988 WD-repeat family protein
YP_001369919.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bmb:BruAb2_0247 cobalamin synthesis protein/P47K family protein
YP_001369920.1	PFAM: Creatininase; KEGG: bms:BRA0986 creatinine amidohydrolase, putative
YP_001369921.1	PFAM: regulatory protein MarR; KEGG: mes:Meso_2845 transcriptional regulator, MarR family
YP_001369922.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bme:BMEII0312 ribose operon repressor
YP_001369923.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bmb:BruAb2_0251 glycerate dehydrogenase
YP_001369924.1	PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: bme:BMEII0314 anthranilate synthase component II
YP_001369925.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bmb:BruAb2_0253 hypothetical 2-deoxy-D-gluconate 3-dehydrogenase
YP_001369926.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bms:BRA0979 GGDEF domain protein
YP_001369927.1	PFAM: beta-lactamase; KEGG: bmb:BruAb2_0256 hypothetical protein
YP_001369928.1	KEGG: bmb:BruAb2_0258 hypothetical protein
YP_001369929.1	PFAM: aa3 type cytochrome c oxidase subunit IV; KEGG: bmb:BruAb2_0259 hypothetical protein
YP_001369930.1	PFAM: alanine dehydrogenase/PNT domain protein; KEGG: bms:BRA0973 NAD(P) transhydrogenase, alpha subunit
YP_001369931.1	KEGG: bmb:BruAb2_0261 PntAB, NAD(P) transhydrogenase, alpha2 subunit
YP_001369932.1	PFAM: NAD(P) transhydrogenase beta subunit; KEGG: bmb:BruAb2_0262 PntB, NAD(P) transhydrogenase, beta subunit
YP_001369933.1	PFAM: dihydrodipicolinate reductase; homoserine dehydrogenase NAD-binding; SAF domain protein; KEGG: bms:BRA0970 oxidoreductase, putative
YP_001369934.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bmb:BruAb2_0264 hydrolase, haloacid dehalogenase-like family
YP_001369935.1	PFAM: MaoC domain protein dehydratase; KEGG: bmb:BruAb2_0265 hypothetical nodulation protein N
YP_001369936.1	KEGG: bms:BRA0967 hypothetical protein
YP_001369937.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_001369938.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bmb:BruAb2_0269 TPR domain protein
YP_001369939.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bmb:BruAb2_0270 glyoxalase family protein
YP_001369940.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0271 ABC transporter, permease protein
YP_001369941.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0272 ABC transporter, ATP-binding protein
YP_001369942.1	TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: bms:BRA0960 lipoprotein, YaeC family
YP_001369943.1	PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: bms:BRA0958 oxidoreductase, GMC family
YP_001369944.1	PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0276 branched-chain amino acid ABC transporter, permease protein
YP_001369945.1	PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0277 branched-chain amino acid ABC transporter, permease protein
YP_001369946.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA0955 branched-chain amino acid ABC transporter, ATP-binding protein LivF, putative
YP_001369947.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0279 branched-chain amino acid ABC transporter, ATP-binding protein
YP_001369948.1	KEGG: bme:BMEII0344 branched-chain amino acid ABC transporter, periplasmic amino acid- binding protein
YP_001369949.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmb:BruAb2_0281 transcriptional regulator, LysR family
YP_001369950.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: bms:BRA0951 transcriptional regulator, AsnC family
YP_001369951.1	PFAM: aminoglycoside phosphotransferase; peptidase M23B; aminotransferase class-III; KEGG: bmb:BruAb2_0284 hypothetical protein
YP_001369952.1	SMART: extracellular solute-binding protein family 3; KEGG: bms:BRA0948 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001369953.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: rle:pRL120428 putative DNA-binding protein
YP_001369954.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: sme:SMc04362 putative transport protein
YP_001369955.1	PFAM: Asp/Glu racemase; KEGG: sme:SMc04361 putative hydantoin racemase protein
YP_001369956.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit
YP_001369957.1	PFAM: protein of unknown function DUF72; KEGG: pde:Pden_4949 protein of unknown function DUF72
YP_001369958.1	intracellular enzymes acting on low molecular weight D-amino acid amides, esters and oligopeptides containing D-amino acids; these proteases release the N-terminal D-amino acid from a peptide, and show higher affinity for D-Ala, D-Ser or D-Thr; no preference for the stereochemistry of the second amino acid
YP_001369959.1	PFAM: OsmC family protein; KEGG: sme:SMb21303 hypothetical membrane-anchored protein
YP_001369960.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bmb:BruAb2_0289 transcriptional regulator, GntR family
YP_001369961.1	membrane component of a putative sugar ABC transporter system
YP_001369962.1	PFAM: inner-membrane translocator; KEGG: atc:AGR_L_3181 putative transport system permease protein
YP_001369963.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_3184 putative ATP-binding component of ABC transporter
YP_001369964.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: atc:AGR_L_3185 putative LACI-type transcriptional regulator
YP_001369965.1	PFAM: protein of unknown function DUF1238; KEGG: bme:BMEII0354 sugar transporter
YP_001369966.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bmb:BruAb2_0292 D-galactose 1-dehydrogenase, hypothetical
YP_001369967.1	catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate
YP_001369968.1	PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: bms:BRA0939 2-dehydro-3-deoxygalactonokinase
YP_001369969.1	catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism
YP_001369970.1	KEGG: bms:BRA0937 sugar ABC transporter, periplasmic sugar-binding protein
YP_001369971.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0297 sugar ABC transporter, ATP-binding protein
YP_001369972.1	PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0298 sugar ABC transporter, permease protein
YP_001369973.1	catalyzes the transamination of D-amino acids and their alpha-keto acids
YP_001369974.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_259 probable ABC transporter
YP_001369975.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_257 nitrate transport protein NrtB
YP_001369976.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; NMT1/THI5 like domain protein; KEGG: atc:AGR_C_256 hypothetical protein
YP_001369977.1	PFAM: protein of unknown function DUF886; KEGG: bme:BMEII0364 hypothetical protein
YP_001369978.1	PFAM: nucleoside recognition domain protein; KEGG: sme:SMc00668 hypothetical, transmembrane protein
YP_001369979.1	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism
YP_001369980.1	PFAM: N-formylglutamate amidohydrolase; KEGG: bme:BMEII0366 formiminoglutamase
YP_001369981.1	catalyzes the degradation of histidine to urocanate and ammmonia
YP_001369982.1	catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway
YP_001369983.1	catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate
YP_001369984.1	TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bms:BRA0927 histidine utilization repressor
YP_001369985.1	KEGG: mlo:mll8137 hypothetical protein
YP_001369986.1	KEGG: nha:Nham_0214 hypothetical protein
YP_001369987.1	member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_001369988.1	catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate
YP_001369989.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bms:BRA0925 transcriptional regulator, putative
YP_001369990.1	catalyzes the oxidative deamination of D-amino acids
YP_001369991.1	TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; KEGG: bmb:BruAb2_0310 Alr, alanine racemase
YP_001369992.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: bmb:BruAb2_0311 alanine catabolic operon transcriptional regulator, hypothetical
YP_001369993.1	KEGG: bms:BRA0921 outer surface protein
YP_001369994.1	PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: bmb:BruAb2_0313 LldD, L-lactate dehydrogenase
YP_001369995.1	TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: bmb:BruAb2_0314 oxidoreductase, molybdopterin-binding, hypothetical
YP_001369996.1	KEGG: bms:BRA0918 hypothetical protein
YP_001369997.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bms:BRA0916 HlyD family secretion protein
YP_001369998.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bms:BRA0915 secretion protein, putative
YP_001369999.1	PFAM: acriflavin resistance protein; KEGG: bms:BRA0914 AcrB/AcrD/AcrF multidrug efflux protein
YP_001370000.1	PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bme:BMEII0383 transcriptional regulator, gntR family
YP_001370001.1	PFAM: sugar isomerase (SIS); KEGG: bmb:BruAb2_0321 NagB, glucosamine-fructose-6-phosphate aminotransferase
YP_001370002.1	TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; KEGG: bmb:BruAb2_0322 NagA, N-acetylglucosamine-6-phosphate deacetylase
YP_001370003.1	KEGG: bms:BRA0910 hypothetical protein
YP_001370004.1	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine
YP_001370005.1	PFAM: aldehyde dehydrogenase; KEGG: bms:BRA0908 aldehyde dehydrogenase family protein
YP_001370006.1	PFAM: protein of unknown function DUF1338; KEGG: bms:BRA0907 hypothetical protein
YP_001370007.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bms:BRA0906 transcriptional regulator, LysR family
YP_001370008.1	PFAM: FAD dependent oxidoreductase; KEGG: bme:BMEII0391 sarcosine oxidase beta subunit
YP_001370009.1	PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mll3626 ABC transporter, periplasmic substrate-binding protein (iron)
YP_001370010.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll3625 ABC transport system permease protein
YP_001370011.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mlo:mll3624 ATP-binding component of transport system
YP_001370012.1	PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: bms:BRA0904 tex protein, putative
YP_001370013.1	SMART: regulatory protein ArsR; KEGG: bmb:BruAb2_0330 transcriptional regulator, ArsR family
YP_001370014.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bmb:BruAb2_0331 oxidoreductase, FMN-binding
YP_001370015.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: bmb:BruAb2_0332 transcriptional regulator, AsnC family
YP_001370016.1	TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bmb:BruAb2_0333 RocF, arginase
YP_001370017.1	catalyzes the formation of L-proline from L-ornithine
YP_001370018.1	KEGG: ret:RHE_CH04049 hypothetical protein
YP_001370019.1	PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: ret:RHE_CH04047 beta-mannosidase protein
YP_001370020.1	PFAM: Domain of unknown function DUF1839; KEGG: atc:AGR_C_4664 hypothetical protein
YP_001370021.1	KEGG: atc:AGR_C_4663 hypothetical protein
YP_001370022.1	KEGG: ret:RHE_CH04044 acyl-CoA dehydrogenase protein
YP_001370023.1	Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides
YP_001370024.1	KEGG: bme:BMEII0398 SEC-independent protein translocase protein TatC
YP_001370025.1	KEGG: atc:AGR_L_3547 hypothetical protein
YP_001370026.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: atc:AGR_C_1212 hypothetical protein
YP_001370028.1	KEGG: nha:Nham_3319 hypothetical protein
YP_001370030.1	KEGG: sme:SMb20922 hypothetical protein
YP_001370031.1	PFAM: phage late control D family protein; KEGG: nha:Nham_3318 phage late control D
YP_001370032.1	PFAM: phage tail X family protein; KEGG: rsp:RSP_2761 putative P2-like prophage tail protein X
YP_001370033.1	KEGG: stm:STM2696 Fels-2 prophage: similar to genes in phage phiCTX
YP_001370034.1	TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: nha:Nham_3322 phage tail tape measure protein TP901, core region
YP_001370036.1	KEGG: pau:PA14_08090 putative phage tail tube protein
YP_001370037.1	KEGG: syf:Synpcc7942_0747 hypothetical protein
YP_001370039.1	KEGG: sme:SMc04186 hypothetical protein
YP_001370040.1	KEGG: cvi:CV0429 probable bacteriophage tail fiber protein
YP_001370041.1	KEGG: bhe:BH03150 virulence-associated protein
YP_001370042.1	KEGG: syf:Synpcc7942_0742 hypothetical protein
YP_001370043.1	KEGG: syf:Synpcc7942_0741 phage tail protein I
YP_001370044.1	PFAM: Baseplate J family protein; KEGG: syf:Synpcc7942_0740 GPJ of phage P2-like
YP_001370045.1	PFAM: GPW/gp25 family protein; KEGG: nha:Nham_3332 gpW/GP25
YP_001370046.1	KEGG: nha:Nham_2384 phage-related baseplate assembly protein V
YP_001370047.1	KEGG: nha:Nham_3334 hypothetical protein
YP_001370049.1	KEGG: nha:Nham_3336 hypothetical protein
YP_001370050.1	PFAM: peptidase U35 phage prohead HK97; KEGG: syf:Synpcc7942_0734 hypothetical protein
YP_001370051.1	TIGRFAM: phage portal protein, lambda family; PFAM: phage portal protein lambda; KEGG: nwi:Nwi_0808 phage portal protein, lambda
YP_001370052.1	PFAM: phage terminase GpA; KEGG: mgm:Mmc1_2050 phage terminase GpA
YP_001370053.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ser:SERP1524 methyltransferase domain protein
YP_001370055.1	TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: bld:BLi02974 putative modification methylase alpha subunit; RBL01010
YP_001370056.1	PFAM: ParB domain protein nuclease; KEGG: mgm:Mmc1_1249 ParB domain protein nuclease
YP_001370057.1	KEGG: son:SO2678 hypothetical protein
YP_001370060.1	KEGG: bhe:BH03480 hypothetical prophage protein
YP_001370064.1	KEGG: mlo:mll0428 hypothetical protein
YP_001370065.1	KEGG: dar:Daro_1461 hypothetical protein
YP_001370074.1	TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase; KEGG: mhu:Mhun_2260 deoxycytidine triphosphate deaminase
YP_001370075.1	PFAM: protein of unknown function DUF982; KEGG: sme:SMb21469 hypothetical protein
YP_001370076.1	PFAM: protein of unknown function DUF159; KEGG: nmu:Nmul_A0049 protein of unknown function DUF159
YP_001370077.1	KEGG: bmb:BruAb1_0980 hypothetical protein
YP_001370078.1	PFAM: protein of unknown function DUF497; KEGG: bmb:BruAb1_0981 hypothetical protein
YP_001370079.1	KEGG: rsp:RSP_2765 hypothetical protein
YP_001370080.1	KEGG: reh:H16_B2382 putative helicase
YP_001370082.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: bms:BR1102 single-stranded DNA-binding protein family
YP_001370085.1	KEGG: atc:AGR_C_793 hypothetical protein
YP_001370088.1	PFAM: helix-turn-helix domain protein; KEGG: mes:Meso_0210 putative prophage repressor
YP_001370089.1	KEGG: mes:Meso_2348 hypothetical protein
YP_001370092.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: dra:DR0583 cell division protein FtsH
YP_001370093.1	KEGG: sma:SAV2481 secreted protein
YP_001370095.1	KEGG: ppr:PBPRB1440 hypothetical protein
YP_001370096.1	KEGG: nar:Saro_3021 hypothetical protein
YP_001370097.1	PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: gfo:orf2990 DNA polymerase III subunit alpha-1
YP_001370098.1	KEGG: tcr:504039.180 mucin-associated surface protein (MASP) Pfam: Mucin PROSITE: ALA_RICH GLU_RICH
YP_001370101.1	PFAM: heat shock protein DnaJ domain protein; KEGG: mes:Meso_1186 heat shock protein DnaJ-like
YP_001370106.1	KEGG: abo:ABO_0763 hypothetical protein
YP_001370108.1	PFAM: Resolvase domain; Recombinase; KEGG: mes:Meso_2219 recombinase
YP_001370109.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bms:BR1602 oxidoreductase, Gfo/Idh/MocA family
YP_001370110.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class-III; KEGG: bmb:BruAb1_1588 DegT/DnrJ/EryC1/StrS family protein
YP_001370111.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: oih:OB0403 PhnB protein
YP_001370112.1	PFAM: putative ammonia monooxygenase; KEGG: zmo:ZMO1886 putative transport protein
YP_001370113.1	KEGG: bmb:BruAb1_1587 hypothetical protein
YP_001370114.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bmb:BruAb1_1586 CtrA, cell cycle transcriptional regulator CtrA
YP_001370115.1	PFAM: response regulator receiver; KEGG: rpd:RPD_3676 response regulator receiver
YP_001370116.1	KEGG: bms:BR1598 hypothetical protein
YP_001370117.1	PFAM: uncharacterised conserved protein UCP033924; KEGG: bmb:BruAb1_1583 hypothetical protein
YP_001370118.1	KEGG: bmb:BruAb1_1582 hypothetical protein
YP_001370119.1	KEGG: bmb:BruAb1_1581 hypothetical protein
YP_001370120.1	PFAM: protein of unknown function DUF1153; KEGG: bmb:BruAb1_1580 hypothetical protein
YP_001370121.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_001370123.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: atc:AGR_C_3767 hypothetical protein
YP_001370124.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bms:BR1590 RNA methyltransferase, TrmH family
YP_001370125.1	PFAM: regulatory protein ArsR; KEGG: bms:BR1589 transcriptional regulator, ArsR family
YP_001370126.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mlo:mlr2805 hypothetical protein
YP_001370127.1	PFAM: extracellular solute-binding protein family 5; KEGG: atc:AGR_L_1481 dipeptide transport protein
YP_001370128.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb1_1572 dipeptide ABC transporter, permease protein
YP_001370129.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bme:BMEI0436 dipeptide transport system permease protein DppC
YP_001370130.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bme:BMEI0437 dipeptide transport ATP-binding protein DppD
YP_001370131.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bmb:BruAb1_1569 dipeptide ABC transporter, ATP-binding protein, hypothetical
YP_001370132.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_1568 glycine betaine/L-proline ABC transporter
YP_001370133.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bme:BMEI0440 glycine betaine/L-proline transport system permease protein ProW
YP_001370134.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bms:BR1579 glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein, putative
YP_001370135.1	KEGG: bmb:BruAb1_1563 hypothetical protein
YP_001370136.1	PFAM: Ribosomal small subunit Rsm22; KEGG: bmb:BruAb1_1562 hypothetical protein
YP_001370137.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bcz:BCZK1735 transcriptional regulator, LysR family
YP_001370138.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: vei:Veis_0849 protein of unknown function DUF6, transmembrane
YP_001370139.1	PFAM: major facilitator superfamily MFS_1; KEGG: bmb:BruAb1_1561 hypothetical transporter
YP_001370140.1	PFAM: regulatory protein MarR; KEGG: bms:BR1572 transcriptional regulator, MarR family
YP_001370141.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: bmb:BruAb1_1559 Lrp-2, leucine-responsive regulatory protein
YP_001370142.1	trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II
YP_001370143.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bmb:BruAb1_1557 cation efflux family protein
YP_001370144.1	TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: bms:BR1566 2-isopropylmalate synthase
YP_001370145.1	KEGG: pde:Pden_3084 lipoprotein, putative
YP_001370146.1	PFAM: metallophosphoesterase; KEGG: bme:BMEI0452 putative phosphohydrolase, Icc family
YP_001370147.1	PFAM: NUDIX hydrolase; KEGG: bmb:BruAb1_1552 MutT/nudix family protein
YP_001370148.1	PFAM: OmpW family protein; KEGG: bms:BR1562 membrane protein, putative
YP_001370149.1	KEGG: bmb:BruAb1_1550 putative glutathione S-transferase
YP_001370150.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bms:BR1560 acetyltransferase, GNAT family
YP_001370151.1	KEGG: bms:BR1559 hypothetical protein
YP_001370152.1	TIGRFAM: conserved hypothetical membrane protein; KEGG: bms:BR1558 hypothetical protein
YP_001370153.1	PFAM: protein of unknown function DUF58; KEGG: bmb:BruAb1_1546 hypothetical protein
YP_001370154.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: bmf:BAB1_1573 chaperonin ClpA/B:AAA ATPase
YP_001370155.1	PFAM: protein of unknown function DUF1285; KEGG: bmb:BruAb1_1544 hypothetical protein
YP_001370156.1	PFAM: NUDIX hydrolase; KEGG: bmb:BruAb1_1543 MutT/nudix family protein
YP_001370157.1	PFAM: Polynucleotide adenylyltransferase region; KEGG: bms:BR1553 tRNA nucleotidyltransferase (CCA-adding enzyme)
YP_001370158.1	PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: mes:Meso_1730 aspartyl/asparaginyl beta-hydroxylase
YP_001370159.1	KEGG: sit:TM1040_0419 hypothetical protein
YP_001370160.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bms:BR1551 acetyltransferase, GNAT family
YP_001370161.1	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis
YP_001370162.1	KEGG: bmb:BruAb1_1538 hypothetical protein
YP_001370163.1	outer membrane protease; involved in virulence in many organisms; OmpT; IcsP; SopA; Pla; PgtE; omptin; in Escherichia coli OmpT can degrade antimicrobial peptides; in Yersinia Pla activates plasminogen during infection; in Shigella flexneria SopA cleaves the autotransporter IcsA
YP_001370164.1	PFAM: purine nucleoside permease; KEGG: bme:BMEI0469 purine nucleoside permease
YP_001370165.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bmb:BruAb1_1535 RNA methyltransferase, TrmH family
YP_001370166.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bme:BMEI0471 ABC transporter ATP-binding protein
YP_001370167.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bme:BMEI0472 ABC transporter ATP-binding protein
YP_001370168.1	TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: bme:BMEI0473 ubiquinol-cytochrome c reductase iron-sulfur subunit
YP_001370169.1	PFAM: Cytochrome b/b6 domain; KEGG: bmb:BruAb1_1531 PetB, ubiquinol-cytochrome c reductase, cytochrome B
YP_001370170.1	PFAM: cytochrome c1; KEGG: bms:BR1541 ubiquinol-cytochrome c reductase, cytochrome c1, putative
YP_001370171.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
YP_001370172.1	PFAM: MaoC domain protein dehydratase; KEGG: bmb:BruAb1_1528 MaoC-related protein
YP_001370173.1	PFAM: MaoC domain protein dehydratase; KEGG: bms:BR1538 MaoC-related protein
YP_001370174.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_001370175.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_001370176.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
YP_001370177.1	KEGG: bmb:BruAb1_1523 hypothetical protein
YP_001370178.1	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: rpd:RPD_0139 chromate transporter
YP_001370179.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP
YP_001370180.1	KEGG: bmb:BruAb1_1521 lipoprotein, hypothetical
YP_001370181.1	PFAM: creatinase; peptidase M24; KEGG: bmb:BruAb1_1520 peptidase, M24 family
YP_001370182.1	PFAM: protein of unknown function DUF152; KEGG: bms:BR1530 conserved hypothetical protein TIGR00726
YP_001370183.1	PFAM: protein of unknown function DUF185; KEGG: bms:BR1529 hypothetical protein
YP_001370184.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
YP_001370185.1	PFAM: protein of unknown function DUF526; KEGG: bmb:BruAb1_1516 hypothetical protein
YP_001370186.1	PFAM: Protein of unknown function DUF1790; KEGG: bmb:BruAb1_1515 hypothetical protein
YP_001370187.1	TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: bmb:BruAb1_1514 CsaA, CsaA protein
YP_001370188.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bme:BMEI0492 osmolarity sensor protein EnvZ
YP_001370189.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bmb:BruAb1_1512 hypothetical transcriptional regulatory protein OmpR
YP_001370190.1	PFAM: regulatory protein MarR; KEGG: bmb:BruAb1_1511 transcriptional regulator, MarR family
YP_001370191.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_001370192.1	KEGG: bms:BR1518 hypothetical protein
YP_001370193.1	PFAM: beta-lactamase domain protein; KEGG: bmb:BruAb1_1508 metallo-beta-lactamase family protein
YP_001370194.1	KEGG: bms:BR1516 hypothetical protein
YP_001370195.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bmb:BruAb1_1506 cold-shock family protein
YP_001370196.1	PFAM: Sporulation domain protein; Lytic transglycosylase catalytic; KEGG: mlo:mll3791 transglycosylase
YP_001370197.1	PFAM: protease inhibitor Kazal-type; KEGG: sme:SMc04226 hypothetical lipoprotein transmembrane
YP_001370198.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_001370199.1	PFAM: protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: bms:BR1511 hypothetical protein
YP_001370200.1	PFAM: thioesterase superfamily protein; KEGG: bmb:BruAb1_1502 long-chain acyl-CoA thioester hydrolase, hypothetical
YP_001370201.1	PFAM: Extensin family protein; KEGG: bmb:BruAb1_1501 hypothetical protein
YP_001370202.1	PFAM: protein of unknown function DUF486; KEGG: bms:BR1508 hypothetical protein
YP_001370203.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bmb:BruAb1_1499 hypothetical membrane protein
YP_001370204.1	PFAM: protein of unknown function DUF1176; KEGG: bmb:BruAb1_1498 hypothetical protein
YP_001370205.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YP_001370206.1	PFAM: glycosyl transferase group 1; KEGG: bmb:BruAb1_1496 LpcC, lipopolysaccharide core biosynthesis mannosyltransferase
YP_001370207.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: bms:BR1502 leucine-responsive regulatory protein
YP_001370208.1	PFAM: cation transporter; KEGG: bmb:BruAb1_1493 cation transport protein
YP_001370209.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bms:BR1499 thioredoxin reductase
YP_001370210.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmb:BruAb1_1491 transcriptional regulator, LysR family
YP_001370211.1	PFAM: extracellular solute-binding protein family 1; KEGG: bms:BRA1180 sugar ABC transporter, periplasmic sugar-binding protein, putative
YP_001370212.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA1181 sugar ABC transporter, permease protein, putative
YP_001370213.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA1182 sugar ABC transporter, permease protein, putative
YP_001370214.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bms:BRA1183 sugar ABC transporter, ATP-binding protein, putative
YP_001370215.1	PFAM: metallophosphoesterase; KEGG: bms:BRA1184 purple acid phosphatase family protein
YP_001370216.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pca:Pcar_1335 maturase-related protein
YP_001370217.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
YP_001370218.1	PFAM: regulatory protein TetR; KEGG: mlo:mll3939 transcriptional regulator (TetR-family)
YP_001370219.1	PFAM: dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: bur:Bcep18194_C6882 NmrA-like
YP_001370220.1	KEGG: mlo:mlr3943 hypothetical protein
YP_001370221.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bms:BR1492 cold-shock family protein
YP_001370222.1	PFAM: NUDIX hydrolase; KEGG: bmb:BruAb1_1485 MutT/nudix family protein
YP_001370223.1	PFAM: SbmABacA family protein; ABC transporter domain protein; KEGG: bms:BR1490 transporter, putative
YP_001370224.1	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity
YP_001370225.1	PFAM: acyltransferase 3; KEGG: hne:HNE_1198 acyltransferase family protein
YP_001370226.1	PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: bms:BR1485 hypothetical protein
YP_001370227.1	PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc01212 putative transport transmembrane protein
YP_001370228.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
YP_001370229.1	PFAM: GatB/Yqey domain protein; KEGG: bmb:BruAb1_1477 hypothetical protein
YP_001370230.1	PFAM: Na?cotransporter; KEGG: bms:BR1481 Na/Pi-cotransporter family protein
YP_001370231.1	synthesizes RNA primers at the replication forks
YP_001370233.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria
YP_001370234.1	KEGG: bmb:BruAb1_1473 hypothetical protein
YP_001370235.1	KEGG: shw:Sputw3181_1598 hypothetical protein
YP_001370236.1	PFAM: protein of unknown function UPF0153; KEGG: bme:BMEI0534 hypothetical protein
YP_001370237.1	KEGG: bmb:BruAb1_1471 hypothetical protein
YP_001370238.1	PFAM: protein of unknown function DUF541; KEGG: bmb:BruAb1_1470 Omp28, immunoreactive 28 kDa outer membrane protein
YP_001370239.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_001370240.1	KEGG: atc:AGR_C_3608 hypothetical protein
YP_001370241.1	PFAM: beta-Ig-H3/fasciclin; KEGG: atc:AGR_C_835 hypothetical protein
YP_001370242.1	KEGG: sme:SMc03832 conserved hypothetical signal peptide protein
YP_001370243.1	PFAM: CsbD family protein; KEGG: sme:SMb21330 hypothetical protein with amino acid permeases signature
YP_001370244.1	PFAM: Choloylglycine hydrolase; KEGG: atc:AGR_L_573 probable hydrolase VCA0877
YP_001370245.1	KEGG: rpe:RPE_4316 hypothetical protein
YP_001370246.1	KEGG: rpc:RPC_3303 hypothetical protein
YP_001370247.1	KEGG: bmb:BruAb1_1464 hypothetical protein
YP_001370248.1	PFAM: Choloylglycine hydrolase; KEGG: bmb:BruAb1_1463 choloylglycine hydrolase family protein
YP_001370249.1	KEGG: nha:Nham_3854 hypothetical protein
YP_001370250.1	KEGG: bmb:BruAb1_1461 hypothetical protein
YP_001370251.1	PFAM: protein of unknown function DUF475; KEGG: bms:BR1465 hypothetical protein
YP_001370252.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pca:Pcar_1335 maturase-related protein
YP_001370253.1	KEGG: plu:plu2788 hypothetical protein
YP_001370254.1	PFAM: isochorismatase hydrolase; KEGG: bme:BMEI0546 pyrazinamidase / nicotinamidase
YP_001370255.1	PFAM: PhnA protein; KEGG: bmb:BruAb1_1458 PhnA protein
YP_001370256.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bme:BMEI0548 flavohemoprotein
YP_001370257.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: bmb:BruAb1_1456 Rieske 2Fe-2S family protein
YP_001370258.1	PFAM: protein of unknown function DUF1498; KEGG: bmb:BruAb1_1455 hypothetical protein
YP_001370259.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: atc:AGR_L_1413 UDPglucose 6-dehydrogenase
YP_001370260.1	PFAM: lipid A biosynthesis domain protein; KEGG: mlo:mlr0010 hypothetical protein
YP_001370261.1	PFAM: glycosyl transferase family 2; KEGG: mlo:mlr0009 hypothetical protein
YP_001370262.1	KEGG: bme:BMEI0552 lysophospholipase L2
YP_001370263.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
YP_001370264.1	catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate
YP_001370265.1	TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bme:BMEI0556 alpha-ketoglutarate permease
YP_001370266.1	KEGG: bmb:BruAb1_1447 hypothetical protein
YP_001370267.1	PFAM: regulatory protein ArsR; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bmb:BruAb1_1446 transcriptional regulator, ArsR family
YP_001370268.1	TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; KEGG: bmb:BruAb1_1445 MetF, 5,10-methylenetetrahydrofolate reductase
YP_001370269.1	PFAM: Auxin Efflux Carrier; KEGG: bme:BMEI0560 transporter
YP_001370270.1	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bmb:BruAb1_1443 hypothetical transglycolase
YP_001370271.1	PFAM: glycoside hydrolase family 25; KEGG: bms:BR1447 glycosyl hydrolase, family 25
YP_001370272.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; putative methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mlo:mlr1575 hypothetical protein
YP_001370273.1	KEGG: mlo:mlr1574 hypothetical protein
YP_001370275.1	KEGG: bmb:BruAb1_1441 hypothetical protein
YP_001370276.1	PFAM: heat shock protein DnaJ domain protein; KEGG: bms:BR1445 DnaJ domain protein
YP_001370277.1	PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: bmb:BruAb1_1439 N-acetylmuramoyl-L-alanine amidase, family 2
YP_001370278.1	PFAM: Lytic transglycosylase catalytic; KEGG: bms:BR1443 transglycosylase SLT domain protein
YP_001370279.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: atc:AGR_C_3699 short chain dehydrogenase
YP_001370280.1	TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bmb:BruAb1_1436 Mn2+/Fe2+ transporter, NRAMP family
YP_001370281.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: bmb:BruAb1_1434 S-adenosyl-methyltransferase
YP_001370282.1	KEGG: bms:BR1438 hypothetical protein
YP_001370283.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: bmb:BruAb1_1432 penicillin-binding protein
YP_001370284.1	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
YP_001370285.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: bmb:BruAb1_1430 MurF, UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase
YP_001370286.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_001370287.1	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
YP_001370288.1	TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: bmb:BruAb1_1427 FtsW, cell division protein
YP_001370289.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_001370290.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_001370291.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
YP_001370292.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_001370293.1	PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: bme:BMEI0583 cell division protein FtsQ
YP_001370294.1	PFAM: cell division protein FtsA; KEGG: bmb:BruAb1_1421 FtsA, cell division protein FtsA
YP_001370295.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
YP_001370296.1	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis
YP_001370297.1	KEGG: bmb:BruAb1_1417 ComL, hypothetical competence protein
YP_001370298.1	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: bmb:BruAb1_1416 RecN, DNA repair protein
YP_001370299.1	this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB
YP_001370300.1	KEGG: bms:BR1419 hypothetical protein
YP_001370301.1	PFAM: AzlC family protein; KEGG: sme:SMc01882 hypothetical protein
YP_001370302.1	PFAM: branched-chain amino acid transport; KEGG: mes:Meso_1995 branched-chain amino acid transport
YP_001370303.1	PFAM: creatinase; peptidase M24; KEGG: bms:BR1418 aminopeptidase P
YP_001370304.1	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype
YP_001370305.1	PFAM: electron transport protein SCO1/SenC; KEGG: bms:BR1416 SCO1/SenC family protein
YP_001370306.1	KEGG: rsp:RSP_2745 hypothetical protein
YP_001370307.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: bms:BR1415 antibiotic acetyltransferase
YP_001370308.1	PFAM: CreA family protein; KEGG: bme:BMEI0595 creA protein
YP_001370309.1	PFAM: UvrD/REP helicase; KEGG: bms:BR1413 DNA helicase II
YP_001370310.1	KEGG: bms:BR1412 serine/threonine protein kinase
YP_001370311.1	PFAM: protein of unknown function DUF336; KEGG: bmb:BruAb1_1406 hypothetical protein
YP_001370312.1	PFAM: FAD linked oxidase domain protein; KEGG: bmb:BruAb1_1405 oxidoreductase
YP_001370313.1	KEGG: bmb:BruAb1_1404 hypothetical protein
YP_001370314.1	PFAM: AsmA family protein; KEGG: bms:BR1408 hypothetical protein
YP_001370315.1	KEGG: bmb:BruAb1_1402 hypothetical protein
YP_001370316.1	KEGG: bmb:BruAb1_1401 hypothetical protein
YP_001370317.1	KEGG: bms:BR1405 hypothetical protein
YP_001370318.1	PFAM: protein of unknown function DUF1321; KEGG: bms:BR1404 hypothetical protein
YP_001370319.1	PFAM: regulatory protein TetR; KEGG: bmb:BruAb1_1398 transcriptional regulator, TetR family
YP_001370320.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bms:BR1401 drug resistance transporter, Bcr/CflA family
YP_001370321.1	KEGG: nha:Nham_2386 hypothetical protein
YP_001370323.1	KEGG: nha:Nham_2393 hypothetical protein
YP_001370324.1	PFAM: zinc finger DHP-type domain protein; phage terminase GpA; KEGG: nha:Nham_2392 phage terminase GpA
YP_001370326.1	KEGG: syn:sll0181 hypothetical protein
YP_001370327.1	KEGG: hne:HNE_1597 DNA-binding protein
YP_001370328.1	PFAM: regulatory protein MerR
YP_001370329.1	TIGRFAM: phage portal protein, lambda family; PFAM: phage portal protein lambda; KEGG: syf:Synpcc7942_0733 phage portal protein, lambda
YP_001370330.1	KEGG: pna:Pnap_0961 peptidase S14, ClpP
YP_001370331.1	KEGG: rsp:RSP_3782 hypothetical protein
YP_001370332.1	KEGG: nwi:Nwi_2831 hypothetical protein
YP_001370334.1	KEGG: nha:Nham_4172 ISSpo6, transposase orf A
YP_001370335.1	PFAM: phage integrase family protein; KEGG: mag:amb2709 integrase
YP_001370336.1	KEGG: bmb:BruAb1_1395 hypothetical protein
YP_001370337.1	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived
YP_001370338.1	PFAM: dihydrofolate reductase region; KEGG: bmb:BruAb1_1393 FolA, dihydrofolate reductase
YP_001370339.1	TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: bmb:BruAb1_1392 HflK, HflK protein
YP_001370340.1	TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: bmb:BruAb1_1391 HflC, HflC protein
YP_001370341.1	KEGG: bmb:BruAb1_1390 hypothetical protein
YP_001370342.1	TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bms:BR1394 serine protease Do, putative
YP_001370343.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bmb:BruAb1_1388 hypothetical protein
YP_001370344.1	PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mlr1450 probable acetyltransferase
YP_001370345.1	TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bme:BMEI0615 phosphoserine phosphatase
YP_001370346.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
YP_001370347.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mlo:mll1446 hypothetical protein
YP_001370348.1	PFAM: protein of unknown function DUF87; KEGG: mlo:mlr1445 hypothetical protein
YP_001370349.1	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bmb:BruAb1_1385 IlvB, acetolactate synthase large subunit
YP_001370350.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit
YP_001370351.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rle:RL3242 putative transmembrane transporter protein
YP_001370352.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: eca:ECA2040 serine/threonine dehydratase
YP_001370353.1	KEGG: bmb:BruAb1_1383 exodeoxyribonuclease V
YP_001370354.1	KEGG: bms:BR1386 hypothetical protein
YP_001370355.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
YP_001370356.1	PFAM: K potassium transporter; KEGG: bme:BMEI0622 kup system potassium uptake protein
YP_001370357.1	PFAM: regulatory protein TetR; KEGG: bmb:BruAb1_1377 transcriptional regulator, TetR family
YP_001370358.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_001370360.1	PFAM: aminotransferase class I and II; KEGG: bme:BMEI0626 transcriptional regulator, GntR family / multiple substrate aminotransferase
YP_001370361.1	PFAM: BA14K family protein; KEGG: bmb:BruAb1_1373 hypothetical protein
YP_001370362.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bmb:BruAb1_1372 hypothetical protein
YP_001370363.1	PFAM: NUDIX hydrolase; KEGG: bmb:BruAb1_1371 hypothetical protein
YP_001370364.1	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: bms:BR1374 phenazine biosynthesis protein, PhzF family
YP_001370365.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bmb:BruAb1_1369 hypothetical protein
YP_001370366.1	PFAM: UspA domain protein; KEGG: nha:Nham_4074 UspA
YP_001370367.1	PFAM: protein of unknown function DUF187; KEGG: bms:BR1354 hypothetical protein
YP_001370368.1	PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein; KEGG: bmb:BruAb1_1349 HlyD family secretion protein
YP_001370369.1	PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: bms:BR1350 ABC transporter, ATP binding/permease protein
YP_001370370.1	PFAM: ABC-2 type transporter; KEGG: bmb:BruAb1_1347 hypothetical ABC transporter, permease protein
YP_001370371.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bmb:BruAb1_1345 hypothetical iron compound TonB-dependent receptor
YP_001370372.1	PFAM: periplasmic binding protein; KEGG: bms:BR1346 iron compound ABC transporter, periplasmic iron compound-binding protein
YP_001370373.1	PFAM: transport system permease protein; KEGG: bms:BR1345 iron compound ABC transporter, permease protein
YP_001370374.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_1342 iron compound ABC transporter, ATP-binding protein
YP_001370375.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bms:BR1343 oxidoreductase, putative
YP_001370376.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bmb:BruAb1_1340 sugar ABC transporter, periplasmic sugar-binding protein
YP_001370377.1	PFAM: inner-membrane translocator; KEGG: bms:BR1340 sugar ABC transporter, permease protein
YP_001370378.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_1337 sugar ABC transporter, ATP-binding protein
YP_001370379.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bms:BR1338 short chain dehydrogenase
YP_001370380.1	KEGG: sme:SMb20614 hypothetical protein
YP_001370381.1	PFAM: sulfatase; type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: rle:pRL90232 putative sulfatase
YP_001370382.1	PFAM: extracellular solute-binding protein family 5; KEGG: rle:pRL90231 putative substrate-binding component of ABC transporter
YP_001370383.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rle:pRL90230 putative component of ABC transporter
YP_001370384.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rle:pRL90229 putative ATP-binding component of ABC transporter
YP_001370385.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL90228 putative permease component of ABC transporter
YP_001370386.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL90227 putative permease component of ABC transporter
YP_001370387.1	PFAM: RbsD or FucU transport; KEGG: bmb:BruAb1_1335 FucU, fucose operon FucU protein
YP_001370388.1	KEGG: bmb:BruAb1_1334 hypothetical acid-shock protein
YP_001370389.1	PFAM: phage integrase family protein; KEGG: rsp:RSP_0217 possible phage-related integrase
YP_001370393.1	PFAM: helix-turn-helix domain protein; KEGG: pde:Pden_3171 transcriptional regulator, XRE family
YP_001370394.1	KEGG: nwi:Nwi_2087 hypothetical protein
YP_001370395.1	KEGG: rme:Rmet_5126 hypothetical protein
YP_001370396.1	PFAM: SNARE associated Golgi protein; KEGG: bmb:BruAb1_1333 DedA family protein
YP_001370397.1	PFAM: CBS domain containing protein; transporter-associated region; Integral membrane protein TerC; KEGG: bmb:BruAb1_1332 CBS domain protein
YP_001370398.1	KEGG: bmb:BruAb1_1331 hypothetical protein
YP_001370399.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bmb:BruAb1_1330 hypothetical sulfate ABC transporter, sulfate-binding protein
YP_001370400.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb1_1329 permease
YP_001370401.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR1328 sulfate ABC transporter, permease protein
YP_001370402.1	PFAM: protein of unknown function DUF1234; KEGG: bms:BR1327 hypothetical protein
YP_001370403.1	KEGG: bmb:BruAb1_1326 hypothetical membrane protein
YP_001370404.1	TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: bms:BR1325 potassium efflux system family protein
YP_001370405.1	part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
YP_001370406.1	KEGG: bmf:BAB1_1343 hypothetical protein
YP_001370407.1	PFAM: MscS Mechanosensitive ion channel; KEGG: bmb:BruAb1_1322 membrane protein
YP_001370408.1	KEGG: bms:BR1321 hypothetical protein
YP_001370409.1	PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mlo:mll1258 sarcosine dehydrogenase
YP_001370410.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bmb:BruAb1_1319 transcriptional regulator, AraC family
YP_001370412.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmb:BruAb1_1318 transcriptional regulatory protein, LysR family
YP_001370413.1	PFAM: Entericidin EcnAB; KEGG: bmb:BruAb1_1317 hypothetical protein
YP_001370414.1	PFAM: glycosyl transferase family 39; KEGG: jan:Jann_0917 hypothetical protein
YP_001370415.1	TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bms:BR1314 3-hydroxyisobutyrate dehydrogenase
YP_001370416.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bmb:BruAb1_1314 acyl-CoA dehydrogenase
YP_001370417.1	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
YP_001370418.1	TIGRFAM: cobalt transporter, subunit CbtB; KEGG: bmb:BruAb1_1311 hypothetical protein
YP_001370419.1	TIGRFAM: cobalt transporter, subunit CbtA; KEGG: bms:BR1309 hypothetical protein
YP_001370420.1	catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP
YP_001370421.1	TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bms:BR1307 cobW protein, putative
YP_001370422.1	with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism
YP_001370423.1	catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide
YP_001370424.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bms:BR1304 hypothetical protein
YP_001370425.1	PFAM: protein of unknown function DUF81; KEGG: bmb:BruAb1_1304 hypothetical protein
YP_001370426.1	PFAM: protein of unknown function DUF1332; KEGG: bms:BR1302 hypothetical protein
YP_001370427.1	KEGG: bms:BR1301 precorrin-3B C17-methyltransferase, putative
YP_001370428.1	PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4457 putative methyl viologen resistance protein
YP_001370429.1	PFAM: regulatory protein TetR; KEGG: pau:PA14_47610 putative transcriptional regulator
YP_001370430.1	TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bme:BMEI0701 precorrin-4 C11-methyltransferase
YP_001370431.1	CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6
YP_001370432.1	Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A
YP_001370433.1	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bme:BMEI0704 uroporphyrin-III C-methyltransferase
YP_001370434.1	responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid
YP_001370435.1	PFAM: aminotransferase class I and II; KEGG: bmb:BruAb1_1296 CobC, CobC protein
YP_001370436.1	CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
YP_001370437.1	PFAM: Extracellular ligand-binding receptor; KEGG: bmb:BruAb1_1294 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, hypothetical
YP_001370438.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: bms:BR1292 monooxygenase, putative
YP_001370439.1	PFAM: phospholipase/Carboxylesterase; KEGG: bms:BR1291 phospholipase/carboxylesterase family protein
YP_001370440.1	KEGG: bms:BR1290 hypothetical protein
YP_001370441.1	TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: bme:BMEI0712 cbiG protein / precorrin-3B C17-methyltransferase
YP_001370442.1	catalyzes the formation of precorrin-3 from precorrin-2
YP_001370443.1	catalyzes the interconversion of precorrin-8X and hydrogenobyrinate
YP_001370444.1	TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: bms:BR1286 nitrite reductase family protein
YP_001370445.1	TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bmb:BruAb1_1286 CobL, precorrin-6Y C5,15-methyltransferase
YP_001370446.1	PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: mes:Meso_0336 siderophore-interacting protein
YP_001370447.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:RL4647 putative ATP-binding component of ABC transporter
YP_001370448.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc01528 putative dipeptide transport ATP-binding ABC transporter protein
YP_001370449.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01527 putative dipeptide transport system permease ABC transporter protein
YP_001370450.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4650 putative transmembrane component of ABC transporter
YP_001370451.1	PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMc01525 putative dipeptide binding periplasmic protein
YP_001370452.1	PFAM: peptidase M19 renal dipeptidase; KEGG: atc:AGR_L_875 hypothetical protein
YP_001370453.1	KEGG: bms:BR1284 hypothetical protein
YP_001370454.1	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase
YP_001370455.1	catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn
YP_001370456.1	Regulatory factor involved in maltose metabolism
YP_001370457.1	KEGG: bmb:BruAb1_1280 hypothetical protein
YP_001370458.1	KEGG: bmb:BruAb1_1279 hypothetical protein
YP_001370459.1	PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: bmb:BruAb1_1278 hypothetical protein
YP_001370460.1	KEGG: bmb:BruAb1_1277 hypothetical protein
YP_001370461.1	PFAM: aminotransferase class I and II; KEGG: bms:BR1275 aminotransferase, class I
YP_001370462.1	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine
YP_001370463.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_CH01179 probable ABC transporter, ATP-binding protein
YP_001370464.1	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese
YP_001370465.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: bms:BR1270 single-stranded-DNA-specific exonuclease RecJ
YP_001370466.1	PFAM: import inner membrane translocase subunit Tim44; KEGG: bms:BR1269 hypothetical protein
YP_001370467.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bmb:BruAb1_1270 GloA, lactoylglutathione lyase
YP_001370468.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bms:BR1266 cold-shock family protein
YP_001370469.1	PFAM: protein of unknown function DUF192; KEGG: bmb:BruAb1_1267 hypothetical protein
YP_001370470.1	PFAM: alpha/beta hydrolase fold; KEGG: bmb:BruAb1_1266 hydrolase, alpha/beta hydrolase fold family
YP_001370471.1	TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein; KEGG: bmb:BruAb1_1265 CysE, serine acetyltransferase
YP_001370472.1	KEGG: bmb:BruAb1_1264 hypothetical protein
YP_001370475.1	PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: sec:SC005 RK2 tetracycline repressor protein
YP_001370476.1	PFAM: major facilitator superfamily MFS_1; KEGG: sec:SC004 tetracycline efflux protein
YP_001370477.1	KEGG: mlo:mll0178 hypothetical protein
YP_001370478.1	KEGG: bmb:BruAb1_1263 ferripyochelin-binding protein, hypothetical
YP_001370479.1	PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: bmb:BruAb1_1262 hypothetical protein
YP_001370480.1	PFAM: type IV pilus assembly PilZ; KEGG: mlo:mll0185 hypothetical protein
YP_001370481.1	PFAM: protein of unknown function DUF1457; KEGG: bms:BR1258 hypothetical protein
YP_001370482.1	PFAM: Rhomboid family protein; KEGG: bmb:BruAb1_1259 rhomboid family protein
YP_001370483.1	PFAM: CBS domain containing protein; KEGG: bmb:BruAb1_1258 CBS domain protein
YP_001370484.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: bms:BR1254 RNA methyltransferase, TrmH family, group 3
YP_001370485.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_001370486.1	forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
YP_001370487.1	Modulates Rho-dependent transcription termination
YP_001370488.1	binds directly to 23S ribosomal RNA
YP_001370489.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_001370490.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_001370491.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_001370492.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_001370493.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
YP_001370494.1	KEGG: bms:BR1241 hypothetical protein
YP_001370495.1	KEGG: bmb:BruAb1_1244 hypothetical protein
YP_001370496.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_001370497.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_001370498.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_001370499.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_001370500.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_001370501.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_001370502.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_001370503.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_001370504.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_001370505.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_001370506.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_001370507.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
YP_001370508.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_001370509.1	one of the stabilizing components for the large ribosomal subunit
YP_001370510.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_001370511.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_001370512.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_001370513.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_001370514.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
YP_001370515.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_001370516.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
YP_001370517.1	binds 5S rRNA along with protein L5 and L25
YP_001370518.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_001370519.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
YP_001370520.1	late assembly protein
YP_001370521.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
YP_001370522.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
YP_001370523.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_001370524.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_001370525.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_001370526.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_001370527.1	TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bms:BR1207 serine protease
YP_001370528.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: bme:BMEI0784 ATPase associated with chromosome architecture/replication
YP_001370529.1	PFAM: Lytic transglycosylase catalytic; KEGG: bme:BMEI0785 transcriptional regulatory protein
YP_001370530.1	PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: bms:BR1204 OmpA family protein
YP_001370531.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
YP_001370532.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001370533.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: atc:AGR_C_2463 24% identical (1 gap) to 102 residues of 114 aa protein sp:YQJZ_BACSU
YP_001370534.1	PFAM: NIPSNAP family containing protein; KEGG: ret:RHE_CH00993 hypothetical protein
YP_001370535.1	PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: atc:AGR_C_2461 hypothetical protein
YP_001370536.1	PFAM: Glutathione S-transferase domain; KEGG: ret:RHE_CH02320 glutathione S-transferase protein
YP_001370537.1	Converts isocitrate to alpha ketoglutarate
YP_001370538.1	KEGG: bms:BR1198 hypothetical protein
YP_001370539.1	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: bms:BR1197 ThiJ/PfpI family protein
YP_001370540.1	TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bmb:BruAb1_1201 RNA methyltransferase, TrmH family, group 1
YP_001370541.1	converts L-glutamate to D-glutamate, a component of peptidoglycan
YP_001370542.1	PFAM: aldo/keto reductase; KEGG: sth:STH658 oxidoreductase
YP_001370543.1	KEGG: mlo:mll1484 hypothetical protein
YP_001370544.1	PFAM: protein of unknown function DUF1452; KEGG: atc:AGR_pAT_399 hypothetical protein
YP_001370545.1	KEGG: bmb:BruAb1_1196 hypothetical protein
YP_001370546.1	MDM; functions in conversion of succinate to propionate
YP_001370547.1	PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: bms:BR1189 propionyl-CoA carboxylase, alpha subunit
YP_001370548.1	PFAM: carboxyl transferase; KEGG: bmb:BruAb1_1193 propionlyl-CoA carboxylase
YP_001370549.1	PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: bme:BMEI0802 transcriptional regulator, MerR family
YP_001370550.1	PFAM: protein of unknown function DUF924; KEGG: bms:BR1186 hypothetical protein
YP_001370551.1	KEGG: bmb:BruAb1_1190 hypothetical protein
YP_001370552.1	NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis
YP_001370553.1	PFAM: protein of unknown function DUF883 ElaB; KEGG: bmb:BruAb1_1188 hypothetical protein
YP_001370554.1	KEGG: mes:Meso_1014 hypothetical protein
YP_001370555.1	KEGG: bms:BR1181 hypothetical protein
YP_001370556.1	KEGG: bmb:BruAb1_1186 hypothetical protein
YP_001370557.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bms:BR1179 transcriptional regulator, putative
YP_001370558.1	PFAM: protein of unknown function DUF1624; KEGG: bms:BR1178 hypothetical protein
YP_001370559.1	PFAM: protein of unknown function DUF218; KEGG: bmb:BruAb1_1183 hypothetical protein
YP_001370560.1	KEGG: bmb:BruAb1_1182 hypothetical protein
YP_001370561.1	TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; KEGG: bms:BR1175 L-serine dehydratase, iron-sulfur-dependent, single chain form
YP_001370562.1	PFAM: uncharacterised conserved protein UCP032025; KEGG: bmb:BruAb1_1180 hypothetical protein
YP_001370563.1	KEGG: bmb:BruAb1_1179 hypothetical protein
YP_001370564.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; KEGG: bmb:BruAb1_1178 D-alanyl-D-alanine carboxypeptidase
YP_001370565.1	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA
YP_001370566.1	TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: bmb:BruAb1_1175 ClpA, ATP-dependent Clp protease, ATP-binding subunit ClpA
YP_001370567.1	PFAM: AzlC family protein; KEGG: sme:SMc02108 hypothetical protein
YP_001370568.1	PFAM: branched-chain amino acid transport; KEGG: atc:AGR_C_2526 hypothetical protein
YP_001370569.1	PFAM: histidine triad (HIT) protein; KEGG: bmb:BruAb1_1174 HIT family protein
YP_001370570.1	PFAM: protein of unknown function DUF482; KEGG: bms:BR1167 hypothetical protein
YP_001370571.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bmb:BruAb1_1172 glycerophosphoryl diester phosphodiesterase family protein
YP_001370572.1	PFAM: Endoribonuclease L-PSP; KEGG: bms:BR1165 hypothetical protein
YP_001370573.1	PFAM: Domain of unknown function DUF1849; KEGG: bmb:BruAb1_1170 hypothetical protein
YP_001370574.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_001370575.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_001370576.1	Catalyzes the phosphorylation of UMP to UDP
YP_001370577.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_001370578.1	catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate
YP_001370579.1	PFAM: phosphatidate cytidylyltransferase; KEGG: bms:BR1157 phosphatidate cytidylyltransferase
YP_001370580.1	TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; KEGG: bmb:BruAb1_1162 hypothetical membrane-associated zinc metalloprotease
YP_001370581.1	PFAM: surface antigen (D15); surface antigen variable number repeat protein; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: bms:BR1154 bacterial surface antigen
YP_001370582.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
YP_001370583.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_001370584.1	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis
YP_001370585.1	PFAM: protein of unknown function DUF1009; KEGG: bmb:BruAb1_1156 conserved hypothetical protein TIGR00148
YP_001370586.1	catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM
YP_001370587.1	type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH
YP_001370588.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_001370589.1	PFAM: ComEC/Rec2-related protein; KEGG: bms:BR1145 ComEC/Rec2 family protein, putative
YP_001370590.1	Represses a number of genes involved in the response to DNA damage
YP_001370591.1	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: bmb:BruAb1_1149 MoeA, molybdopterin biosynthesis protein MoeA
YP_001370592.1	MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis
YP_001370593.1	involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water
YP_001370594.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_001370595.1	KEGG: bms:BR1139 rotamase family protein
YP_001370596.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
YP_001370597.1	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: bmb:BruAb1_1143 preprotein translocase, SecG subunit, hypothetical
YP_001370598.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bmb:BruAb1_1142 hypothetical protein
YP_001370599.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_001370600.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
YP_001370601.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_001370602.1	PFAM: protein of unknown function DUF1428; KEGG: sal:Sala_0015 protein of unknown function DUF1428
YP_001370603.1	PFAM: Septum formation initiator; KEGG: bmb:BruAb1_1136 hypothetical protein
YP_001370604.1	PFAM: dehydrogenase E1 component; KEGG: bmb:BruAb1_1135 PdhA, pyruvate dehydrogenase complex, E1 component, alpha subunit
YP_001370605.1	catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase
YP_001370606.1	TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: bms:BR1127 pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase
YP_001370607.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc01034 hypothetical protein
YP_001370608.1	E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_001370609.1	KEGG: bme:BMEI0858 hypothetical protein
YP_001370610.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_001370611.1	PFAM: cyclase/dehydrase; KEGG: bmb:BruAb1_1129 hypothetical protein
YP_001370612.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bms:BR1122 glucose 1-dehydrogenase
YP_001370613.1	PFAM: CinA domain protein; KEGG: bms:BR1121 competence/damage-inducible protein CinA
YP_001370614.1	bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations
YP_001370615.1	TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: bme:BMEI0864 nitrogen regulation protein NifR3
YP_001370616.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bme:BMEI0865 nitrogen regulation protein NtrB
YP_001370617.1	TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bmb:BruAb1_1123 NtrC, nitrogen regulation protein NtrC
YP_001370618.1	KEGG: mes:Meso_3125 hypothetical protein
YP_001370619.1	similar to YegS from E. coli
YP_001370620.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: bmb:BruAb1_0996 rare lipoprotein A family protein
YP_001370621.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: bms:BR0991 D-alanyl-D-alanine carboxypeptidase
YP_001370622.1	catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP)
YP_001370623.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA
YP_001370624.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
YP_001370625.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: bme:BMEI0986 sec-independent protein tatD
YP_001370626.1	PFAM: beta-lactamase domain protein; KEGG: bmb:BruAb1_1003 PhnP protein
YP_001370627.1	responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA
YP_001370628.1	TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bme:BMEI0983 ribosomal large subunit pseudouridine synthase C
YP_001370629.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bms:BR1001 hypothetical protein
YP_001370630.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bmb:BruAb1_1007 hydrolase, haloacid dehalogenase-like family
YP_001370631.1	PFAM: ATP12 ATPase; KEGG: bmb:BruAb1_1008 hypothetical protein
YP_001370632.1	TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: bms:BR1004 glutamine synthetase, type I
YP_001370633.1	PFAM: nitrogen regulatory protein P-II; KEGG: bmb:BruAb1_1010 GlnB, nitrogen regulatory protein P-II
YP_001370634.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: bms:BR1006 YjeF family protein
YP_001370635.1	KEGG: bmb:BruAb1_1012 hypothetical protein
YP_001370636.1	catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate
YP_001370637.1	Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway
YP_001370638.1	KEGG: bms:BR1011 hypothetical protein
YP_001370639.1	catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense
YP_001370640.1	TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II; KEGG: bme:BMEI0971 phospho-2-dehydro-3-deoxyheptonate aldolase
YP_001370641.1	PFAM: diacylglycerol kinase; KEGG: bms:BR1014 diacylglycerol kinase
YP_001370642.1	NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
YP_001370643.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_001370644.1	KEGG: bmf:BAB1_1035 proline-rich extensin
YP_001370645.1	NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate
YP_001370646.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mes:Meso_1537 short-chain dehydrogenase/reductase SDR
YP_001370647.1	PFAM: Citrate synthase; KEGG: ret:RHE_CH02182 citrate synthase protein
YP_001370648.1	forms citrate from oxaloacetate and acetyl-CoA; functions in TCA cycle
YP_001370649.1	PFAM: metallophosphoesterase; KEGG: mlo:mll0806 hypothetical protein
YP_001370650.1	PFAM: glycosyl transferase group 1; KEGG: rpc:RPC_1446 glycosyl transferase, group 1
YP_001370651.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bmb:BruAb1_1023 mandelate racemase/muconate lactonizing enzyme family protein
YP_001370652.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; protein of unknown function DUF140; KEGG: bmb:BruAb1_1024 hypothetical toulene ABC transporter, permease protein
YP_001370653.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bme:BMEI0964 ABC transporter ATP-binding protein
YP_001370654.1	PFAM: Mammalian cell entry related domain protein; KEGG: bms:BR1021 ABC transporter, periplasmic substrate-binding protein, putative
YP_001370655.1	KEGG: bmb:BruAb1_1027 lipoprotein, hypothetical
YP_001370656.1	KEGG: bmf:BAB1_1043 hypothetical protein
YP_001370657.1	PFAM: ferredoxin; KEGG: bms:BR1026 ferredoxin, 2Fe-2S
YP_001370658.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rco:RC0637 thioredoxin reductase
YP_001370659.1	PFAM: protein of unknown function DUF922; KEGG: bmb:BruAb1_1033 hypothetical protein
YP_001370660.1	TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; KEGG: bmb:BruAb1_1034 FolP, dihydropteroate synthase
YP_001370661.1	TIGRFAM: dihydroneopterin aldolase; KEGG: bms:BR1030 dihydroneopterin aldolase
YP_001370662.1	TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: bmb:BruAb1_1036 FolK, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_001370663.1	KEGG: bms:BR1032 hypothetical protein
YP_001370664.1	PFAM: conserved hypothetical protein 1620; KEGG: bms:BR1033 hypothetical protein
YP_001370665.1	PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: bms:BR1034 hypothetical protein
YP_001370666.1	PFAM: Phosphoglycerate mutase; KEGG: bms:BR1035 hypothetical protein
YP_001370667.1	TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: bmb:BruAb1_1041 DksA, DnaK suppressor protein
YP_001370668.1	KEGG: bmb:BruAb1_1043 hypothetical protein
YP_001370669.1	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: bmb:BruAb1_1044 sensory box histidine kinase/response regulator
YP_001370670.1	PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bmb:BruAb1_1045 hypothetical protein
YP_001370671.1	PFAM: low temperature requirement A; KEGG: rpd:RPD_1756 low temperature requirement A
YP_001370672.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rha:RHA1_ro05032 possible oxidoreductase
YP_001370673.1	PFAM: beta-lactamase; KEGG: bms:BR1041 hypothetical protein
YP_001370674.1	PFAM: MscS Mechanosensitive ion channel; KEGG: bmb:BruAb1_1047 hypothetical protein
YP_001370675.1	PFAM: PRC-barrel domain protein; KEGG: mlo:mll3685 hypothetical protein
YP_001370676.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_001370677.1	PFAM: NUDIX hydrolase; KEGG: bmb:BruAb1_1050 MutT/nudix family protein
YP_001370678.1	catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively
YP_001370679.1	PFAM: UspA domain protein; KEGG: bmb:BruAb1_1052 hypothetical protein
YP_001370680.1	PFAM: molybdopterin binding domain; KEGG: bms:BR1048 CinA-related protein
YP_001370681.1	stationary phase protein that binds TrpR repressor
YP_001370682.1	PFAM: MscS Mechanosensitive ion channel; KEGG: ret:RHE_CH01401 putative mechanosensitive ion channel protein
YP_001370683.1	catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic
YP_001370684.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bme:BMEI0934 ATP-dependent RNA helicase RhlE
YP_001370685.1	CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis
YP_001370686.1	PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: bmb:BruAb1_1059 putative alanyl-tRNA synthetase
YP_001370687.1	PFAM: Rhodanese domain protein; KEGG: bmb:BruAb1_1060 rhodanese family protein
YP_001370688.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bms:BR1056 acetyltransferase, GNAT family
YP_001370689.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bms:BR1057 GGDEF domain protein
YP_001370690.1	KEGG: rpe:RPE_1756 hypothetical protein
YP_001370691.1	PFAM: acetyl-CoA hydrolase/transferase; KEGG: bmb:BruAb1_1062 acetyl-CoA hydrolase/transferase family protein
YP_001370692.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: bme:BMEI0923 3-demethylubiquinone-9 3-methyltransferase
YP_001370693.1	PFAM: Bile acid:sodium symporter; KEGG: bms:BR1064 sodium/bile acid symporter family
YP_001370694.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bmb:BruAb1_1071 GalE-1, UDP-glucose 4-epimerase
YP_001370695.1	functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era
YP_001370696.1	KEGG: bmb:BruAb1_1073 hypothetical protein
YP_001370697.1	PFAM: nitroreductase; KEGG: bmb:BruAb1_1074 nitroreductase family protein
YP_001370698.1	KEGG: bmb:BruAb1_1075 hypothetical protein
YP_001370699.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
YP_001370700.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; KEGG: bmb:BruAb1_1077 D-alanyl-D-alanine carboxypeptidase
YP_001370701.1	PFAM: protein of unknown function DUF37; KEGG: bmb:BruAb1_1078 hypothetical protein
YP_001370702.1	PFAM: nitrogen-fixing NifU domain protein; KEGG: bmb:BruAb1_1079 NifU-related protein
YP_001370703.1	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
YP_001370704.1	PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers
YP_001370705.1	PFAM: Patatin; KEGG: bme:BMEI0908 serine protease
YP_001370706.1	PFAM: phage integrase family protein; KEGG: pde:Pden_3849 phage integrase family protein
YP_001370710.1	KEGG: mpt:Mpe_A3794 membrane-fusion protein
YP_001370711.1	KEGG: pde:Pden_4345 secretion protein HlyD family protein
YP_001370712.1	PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: pde:Pden_4346 ABC transporter related
YP_001370714.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bms:BR1084 CaiB/BaiF family protein
YP_001370715.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bms:BR1085 glutaryl-CoA dehydrogenase
YP_001370716.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bms:BR1086 transcriptional regulator, LysR family
YP_001370717.1	PFAM: luciferase family protein; KEGG: bme:BMEI0894 alkanal monooxygenase alpha chain
YP_001370718.1	PFAM: acriflavin resistance protein; KEGG: bmb:BruAb1_1094 AcrB/AcrD/AcrF multidrug efflux protein
YP_001370719.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bms:BR1089 hypothetical protein
YP_001370720.1	PFAM: regulatory protein TetR; KEGG: bms:BR1090 transcriptional regulator, TetR family
YP_001370721.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
YP_001370722.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
YP_001370723.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bmb:BruAb1_1099 peptidyl-prolyl cis-trans isomerase, cyclophilin-type
YP_001370724.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bms:BR1094 peptidyl-prolyl cis-trans isomerase, cyclophilin-type
YP_001370725.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
YP_001370726.1	KEGG: bme:BMEI0885 hypothetical protein
YP_001370727.1	negatively supercoils closed circular double-stranded DNA
YP_001370728.1	PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bms:BR1098 membrane protein, putative
YP_001370729.1	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll7944 phosphonates transport system permease protein
YP_001370730.1	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_4086 phosphonate uptake transporter
YP_001370731.1	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: rpd:RPD_3821 phosphonate-binding periplasmic protein
YP_001370732.1	TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA0700 PhnC protein, phosphonate ABC transporter, ATP-binding component
YP_001370733.1	TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; KEGG: bms:BR1099 guanylate kinase, putative
YP_001370734.1	TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mlo:mll4974 hypothetical protein
YP_001370735.1	KEGG: ret:RHE_CH00161 probable acetyltransferase protein
YP_001370736.1	TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mlr3349 ATP-binding component of phosphonate transport, HisP-like nucleotide binding protein (phnL)
YP_001370737.1	TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mlr3347 hypothetical protein, similar to phnK gene product (phosphonate metabolism)
YP_001370738.1	PFAM: phosphonate metabolism PhnJ; KEGG: sme:SMb20762 putative C-P (carbon-phosphorus) lyase component protein
YP_001370739.1	PFAM: phosphonate metabolism; KEGG: rle:RL0175 putative phosphonate metabolism protein
YP_001370740.1	PFAM: phosphonate metabolism; KEGG: mlo:mlr3343 putative phosphonate metabolism protein PhnH
YP_001370741.1	PFAM: phosphonate metabolism PhnG; KEGG: mlo:mlr3342 hypothetical protein
YP_001370742.1	TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bme:BMEI0881 transcriptional regulator, gntR family
YP_001370743.1	TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: nha:Nham_2244 arsenate reductase
YP_001370744.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: bms:BR1102 single-stranded DNA-binding protein family
YP_001370745.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
YP_001370746.1	TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: mag:amb2543 dihydrodipicolinate synthase/N-acetylneuraminate lyase
YP_001370748.1	PFAM: histone family protein DNA-binding protein; KEGG: bmb:BruAb1_1111 DNA-binding protein HU
YP_001370749.1	KEGG: bms:BR1106 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001370750.1	binds and unfolds substrates as part of the ClpXP protease
YP_001370751.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
YP_001370752.1	PFAM: GTP-binding protein HSR1-related; KEGG: bmb:BruAb1_1116 GTP-binding protein, hypothetical
YP_001370753.1	Stimulates the elongation of poly(A) tails
YP_001370754.1	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain
YP_001370755.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bmb:BruAb1_1121 NtrX, nitrogen regulation protein NtrX
YP_001370756.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: bmb:BruAb1_1122 NtrY, nitrogen regulation protein NtrY
YP_001370757.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH02834 probable acetyltransferase protein
YP_001370759.1	PFAM: extracellular solute-binding protein family 3; KEGG: bmb:BruAb1_0874 hypothetical amino-acid ABC transporter, periplasmic binding protein protein
YP_001370760.1	KEGG: mac:MA1909 dTDP-4-dehydrorhamnose 3,5-epimerase
YP_001370761.1	PFAM: glycosyl transferase family 2; KEGG: ppd:Ppro_3338 glycosyl transferase, family 2
YP_001370762.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa0036 putative ABC transporter ATP-binding protein
YP_001370763.1	PFAM: biotin/lipoate A/B protein ligase; KEGG: aau:AAur_2129 putative lipoate-protein ligase
YP_001370764.1	KEGG: mlo:mll8493 hypothetical protein
YP_001370765.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: sme:SMb20389 hypothetical protein
YP_001370766.1	PFAM: porin; KEGG: bmb:BruAb1_0657 Omp2b, porin
YP_001370768.1	KEGG: aav:Aave_0202 hypothetical protein
YP_001370769.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bms:BR0962 hypothetical protein
YP_001370770.1	TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: bmb:BruAb1_0967 FumB, fumarate hydratase, class I
YP_001370771.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMb20456 putative dehydrogenasereductase protein
YP_001370772.1	PFAM: regulatory protein TetR; KEGG: mlo:mlr0535 probable transcriptional regulator
YP_001370773.1	KEGG: sme:SMc00147 hypothetical protein
YP_001370774.1	PFAM: regulatory protein MarR; KEGG: mlo:mlr0538 probable transcription regulator
YP_001370775.1	PFAM: protein of unknown function DUF971; KEGG: bmb:BruAb1_0965 hypothetical protein
YP_001370776.1	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z
YP_001370777.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: mlo:mlr0545 hypothetical protein
YP_001370778.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: bmb:BruAb1_0963 MobA, molybdopterin-guanine dinucleotide biosynthesis protein A
YP_001370779.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: bms:BR0956 molybdopterin-guanine dinucleotide biosynthesis protein B
YP_001370780.1	PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: bms:BR0955 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001370781.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0953 amino acid ABC transporter, permease protein
YP_001370782.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0952 amino acid ABC transporter, permease protein
YP_001370783.1	PFAM: Glutathione S-transferase domain; KEGG: bms:BR0951 glutathione S-transferase domain protein
YP_001370784.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bms:BR0950 oxidoreductase, putative
YP_001370785.1	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: bmf:BAB1_0967 membrane protein involved in aromatic hydrocarbon degradation
YP_001370786.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
YP_001370787.1	KEGG: bms:BR0946 hypothetical protein
YP_001370788.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: bmb:BruAb1_0954 outer membrane efflux family protein
YP_001370789.1	PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bmb:BruAb1_0953 protein-L-isoaspartate O-methyltransferase, hypothetical
YP_001370790.1	PFAM: Heavy metal transport/detoxification protein; KEGG: bmb:BruAb1_0951 heavy-metal-associated domain protein
YP_001370791.1	KEGG: bms:BR0940 hypothetical protein
YP_001370792.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; FeS assembly scaffold SufA; PFAM: HesB/YadR/YfhF-family protein; KEGG: bmb:BruAb1_0948 HesB/YadR/YfhF family protein
YP_001370793.1	PFAM: TfoX domain protein; KEGG: rle:RL2596 putative TfoX family protein
YP_001370794.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bms:BR0938 ATP-dependent RNA helicase, DEAD/DEAH box family
YP_001370795.1	catalyzes the phosphorylation of NAD to NADP
YP_001370796.1	TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59; KEGG: bms:BR0935 hypothetical protein
YP_001370797.1	TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bms:BR0934 aminotransferase, class V
YP_001370798.1	TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: bms:BR0933 hypothetical protein
YP_001370799.1	TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BR0932 ABC transporter, ATP-binding protein
YP_001370800.1	with SufCD activates cysteine desulfurase SufS
YP_001370802.1	PFAM: aminotransferase class V; KEGG: bmb:BruAb1_0939 cysteine desulfurase, hypothetical
YP_001370803.1	KEGG: bmb:BruAb1_0938 hypothetical protein
YP_001370804.1	PFAM: small multidrug resistance protein; KEGG: bmb:BruAb1_0937 QacH, quaternary ammonium compound-resistance protein
YP_001370805.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
YP_001370806.1	KEGG: bmb:BruAb1_0934 hypothetical protein
YP_001370807.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bmb:BruAb1_0933 Bcp, bacterioferritin comigratory protein
YP_001370808.1	PFAM: protein of unknown function DUF455; KEGG: bme:BMEI1050 hypothetical protein
YP_001370809.1	PFAM: peptidase M23B; KEGG: mlo:mll8577 hypothetical protein
YP_001370810.1	catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA
YP_001370811.1	TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bms:BR0916 penicillin-binding protein 1A, putative
YP_001370812.1	PFAM: cell wall hydrolase/autolysin; KEGG: bms:BR0915 N-acetylmuramoyl-L-alanine amidase, family 3
YP_001370813.1	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: bmb:BruAb1_0923 ribonuclease, Rne/Rng domain protein
YP_001370814.1	PFAM: aminotransferase class I and II; KEGG: bms:BR0911 aminotransferase, class I
YP_001370815.1	PFAM: peptidase M48 Ste24p; Tetratricopeptide TPR_2 repeat protein; KEGG: bms:BR0910 hypothetical protein
YP_001370816.1	PFAM: DSBA oxidoreductase; KEGG: bms:BR0909 outer membrane protein, putative
YP_001370817.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_001370818.1	composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism
YP_001370819.1	an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
YP_001370820.1	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys
YP_001370821.1	KEGG: bmb:BruAb1_0915 hypothetical protein
YP_001370822.1	Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis
YP_001370823.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bmb:BruAb1_0912 acetyltransferase, GNAT family
YP_001370824.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_001370825.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
YP_001370826.1	KEGG: spn:SP_1145 hypothetical protein
YP_001370827.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: mta:Moth_1229 DNA-directed DNA polymerase
YP_001370832.1	PFAM: glycoside hydrolase family 24; KEGG: sit:TM1040_1305 glycoside hydrolase, family 24
YP_001370833.1	KEGG: rle:RL3922 hypothetical protein
YP_001370834.1	PFAM: phage late control D family protein; KEGG: nha:Nham_2371 phage late control D
YP_001370835.1	PFAM: phage tail X family protein; KEGG: nha:Nham_3320 phage tail X
YP_001370836.1	PFAM: phage P2 GpU family protein; KEGG: nha:Nham_2373 phage P2 GpU
YP_001370837.1	TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: dvu:DVU1107 tail tape measure protein
YP_001370839.1	PFAM: phage major tail tube protein; KEGG: nha:Nham_3325 phage major tail tube protein
YP_001370840.1	PFAM: phage tail sheath protein; KEGG: nha:Nham_3326 phage tail sheath protein
YP_001370842.1	KEGG: nha:Nham_2380 phage-related tail fibre protein-like
YP_001370843.1	TIGRFAM: phage tail protein I; KEGG: nha:Nham_2381 phage tail protein I
YP_001370844.1	PFAM: Baseplate J family protein; KEGG: nha:Nham_2382 baseplate J-like protein
YP_001370845.1	PFAM: GPW/gp25 family protein; KEGG: nha:Nham_2383 gpW/GP25
YP_001370846.1	PFAM: PAAR repeat-containing protein; KEGG: dde:Dde_1878 hypothetical protein
YP_001370847.1	KEGG: nha:Nham_2384 phage-related baseplate assembly protein V
YP_001370848.1	KEGG: nha:Nham_2385 hypothetical protein
YP_001370849.1	KEGG: nha:Nham_3335 hypothetical protein
YP_001370850.1	KEGG: nha:Nham_3336 hypothetical protein
YP_001370851.1	TIGRFAM: phage portal protein, lambda family; PFAM: phage portal protein lambda; KEGG: nwi:Nwi_0808 phage portal protein, lambda
YP_001370852.1	PFAM: phage terminase GpA; KEGG: nha:Nham_2392 phage terminase GpA
YP_001370853.1	PFAM: regulatory protein MerR; KEGG: atc:AGR_C_800 hypothetical protein
YP_001370854.1	KEGG: nha:Nham_2394 hypothetical protein
YP_001370855.1	PFAM: transcription antitermination protein NusG; KEGG: atc:AGR_C_797 transcription antitermination protein NusG
YP_001370856.1	KEGG: mlo:mlr8518 hypothetical protein
YP_001370857.1	KEGG: nar:Saro_2694 hypothetical protein
YP_001370858.1	KEGG: mlo:mlr8516 hypothetical protein
YP_001370859.1	KEGG: mlo:msr8512 hypothetical protein
YP_001370860.1	KEGG: mes:Meso_1205 hypothetical protein
YP_001370861.1	PFAM: ParB domain protein nuclease; MT-A70 family protein; KEGG: spj:MGAS2096_Spy1128 adenine-specific methyltransferase
YP_001370863.1	KEGG: sil:SPO0915 hypothetical protein
YP_001370864.1	PFAM: helix-turn-helix domain protein; peptidase S24 S26A and S26B; KEGG: atc:AGR_C_784 hypothetical protein
YP_001370867.1	KEGG: hit:NTHI1489 hypothetical protein
YP_001370868.1	KEGG: pde:Pden_0967 hypothetical protein
YP_001370870.1	KEGG: psb:Psyr_2830 hypothetical protein
YP_001370871.1	KEGG: mpt:Mpe_B0155 hypothetical protein
YP_001370872.1	PFAM: phage integrase family protein; KEGG: jan:Jann_3521 phage integrase
YP_001370873.1	KEGG: bmb:BruAb1_0909 hypothetical protein
YP_001370874.1	KEGG: bms:BR0896 hypothetical protein
YP_001370875.1	PFAM: protein of unknown function DUF1127; KEGG: bmb:BruAb1_0907 hypothetical protein
YP_001370876.1	TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine
YP_001370877.1	KEGG: bms:BR0893 phytoene synthase
YP_001370878.1	PFAM: protein of unknown function DUF498; KEGG: bmb:BruAb1_0904 hypothetical protein
YP_001370879.1	part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
YP_001370880.1	TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: bmb:BruAb1_0902 preprotein translocase, YajC subunit
YP_001370881.1	PFAM: protein of unknown function DUF815; KEGG: bmb:BruAb1_0901 hypothetical protein
YP_001370882.1	PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: bmb:BruAb1_0900 peptidase, M23/M37 family
YP_001370883.1	catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins
YP_001370884.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
YP_001370885.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001370886.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: bmb:BruAb1_0896 TatC, Sec-independent protein translocase protein TatC
YP_001370887.1	mediates the export of protein precursors bearing twin-arginine signal peptides
YP_001370888.1	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes
YP_001370889.1	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: bmb:BruAb1_0893 segregation and condensation protein B
YP_001370890.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: bmb:BruAb1_0892 hypothetical protein
YP_001370891.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: bme:BMEI1087 beta-hexosaminidase A
YP_001370892.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pca:Pcar_1335 maturase-related protein
YP_001370893.1	PFAM: Sporulation domain protein; KEGG: bmb:BruAb1_0890 hypothetical protein
YP_001370894.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_001370895.1	dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate
YP_001370896.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: bmb:BruAb1_0887 HesB/YadR/YfhF family protein
YP_001370897.1	PFAM: protein of unknown function DUF533; KEGG: bmb:BruAb1_0886 hypothetical protein
YP_001370898.1	TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bms:BR0873 exodeoxyribonuclease III
YP_001370899.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: bms:BR0872 exopolysacchride production negative regulator ExoR
YP_001370900.1	PFAM: nuclease (SNase domain protein); KEGG: bms:BR0870 nuclease domain protein
YP_001370901.1	KEGG: bmb:BruAb1_0881 hypothetical protein
YP_001370902.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: bmb:BruAb1_0880 transcriptional regulator, AsnC family
YP_001370903.1	catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole
YP_001370904.1	catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole
YP_001370905.1	PFAM: protein of unknown function DUF1289; KEGG: bmb:BruAb1_0877 hypothetical protein
YP_001370906.1	KEGG: bmb:BruAb1_0876 hypothetical protein
YP_001370907.1	TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: bmb:BruAb1_0875 TIM-barrel protein, YjbN family
YP_001370908.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bmb:BruAb1_0873 hydrolase, haloacid dehalogenase-like family
YP_001370909.1	TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bms:BR0860 PhnM protein
YP_001370910.1	PFAM: protein of unknown function DUF1045; KEGG: bms:BR0859 hypothetical protein
YP_001370911.1	PFAM: PfkB domain protein; KEGG: bms:BR0858 2-dehydro-3-deoxygluconokinase, putative
YP_001370912.1	PFAM: Aldose 1-epimerase; KEGG: bmb:BruAb1_0869 GalM, aldose 1-epimerase
YP_001370913.1	PFAM: protein of unknown function DUF847; KEGG: bmb:BruAb1_0868 hypothetical protein
YP_001370914.1	Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides
YP_001370915.1	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_001370916.1	FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.
YP_001370917.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bmb:BruAb1_0864 alcohol dehydrogenase, zinc-containing
YP_001370918.1	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA
YP_001370919.1	PFAM: ribulose-phosphate 3-epimerase; Orotidine 5'-phosphate decarboxylase; KEGG: bms:BR0850 ribulose-phosphate 3-epimerase
YP_001370920.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
YP_001370921.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bme:BMEI1118 biphenyl-2,3-diol 1,2-dioxygenase III
YP_001370922.1	PFAM: protein of unknown function DUF1234; KEGG: bms:BR0845 hypothetical protein
YP_001370923.1	PFAM: HpcH/HpaI aldolase; KEGG: bmb:BruAb1_0857 hydroxyacid aldolase, hypothetical
YP_001370924.1	PFAM: protein of unknown function DUF1476; KEGG: bms:BR0843 hypothetical protein
YP_001370925.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_001370926.1	With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway
YP_001370927.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_001370928.1	PFAM: Glutathione S-transferase domain; KEGG: bms:BR0839 glutathione S-transferase family protein
YP_001370929.1	KEGG: bmb:BruAb1_0851 hypothetical lipoprotein
YP_001370930.1	KEGG: atc:AGR_C_3387 hypothetical protein
YP_001370931.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: sme:SMc00490 putative transcription regulator protein
YP_001370932.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_001370933.1	PFAM: BolA family protein; KEGG: bmb:BruAb1_0849 BolA-related protein
YP_001370934.1	TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: bms:BR0835 glutaredoxin-related protein
YP_001370935.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bmb:BruAb1_0846 drug resistance transporter, Bcr/CflA family
YP_001370936.1	PFAM: inositol monophosphatase; KEGG: bmb:BruAb1_0845 inositol monophosphatase family protein
YP_001370937.1	TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs
YP_001370939.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_001370940.1	PFAM: Extensin family protein; KEGG: bms:BR0828 hypothetical protein
YP_001370941.1	KEGG: bmb:BruAb1_0841 hypothetical protein
YP_001370942.1	KEGG: bmb:BruAb1_0840 hypothetical protein
YP_001370943.1	PFAM: helix-turn-helix HxlR type; KEGG: mlo:mlr2600 hypothetical protein
YP_001370944.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: pae:PA0741 hypothetical protein
YP_001370945.1	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase
YP_001370946.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_0838 LolD, lipoprotein releasing system ATP-binding protein
YP_001370947.1	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: bms:BR0823 ABC transporter, permease protein
YP_001370948.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_001370949.1	PFAM: protein of unknown function DUF1467; KEGG: bms:BR0819 hypothetical protein
YP_001370950.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bmb:BruAb1_0832 glyoxalase family protein
YP_001370951.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: bms:BR0817 metallo-beta-lactamase family protein
YP_001370952.1	TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: bms:BR0816 biotin--acetyl-CoA-carboxylase ligase
YP_001370953.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001370954.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001370955.1	Catalyzes the transfer of electrons from NADH to ubiquinone
YP_001370956.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001370957.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001370958.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001370959.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001370960.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001370961.1	part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase
YP_001370962.1	catalyzes the transfer of electrons from NADH to ubiquinone
YP_001370963.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001370964.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: atc:AGR_C_2344 hypothetical protein
YP_001370965.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001370966.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_001370967.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001370968.1	PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: bbk:BARBAKC583_0646 putative lipoprotein
YP_001370969.1	PFAM: regulatory protein TetR; KEGG: hne:HNE_0025 transcriptional regulator, TetR family
YP_001370970.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: nha:Nham_0853 hypothetical protein
YP_001370971.1	TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bmb:BruAb1_1197 hypothetical membrane protein
YP_001370972.1	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bmb:BruAb1_1199 outer membrane protein, hypothetical
YP_001370973.1	exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH
YP_001370974.1	PFAM: proteinase inhibitor I11 ecotin; KEGG: bpm:BURPS1710b_1272 ecotin
YP_001370975.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: mlo:mll1994 hypothetical protein
YP_001370976.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mlo:mll6730 multidrug-efflux transport protein
YP_001370977.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mlo:mll6731 multidrug efflux membrane fusion protein
YP_001370978.1	KEGG: mlo:mll6732 hypothetical protein
YP_001370979.1	PFAM: MgtC/SapB transporter; KEGG: pau:PA14_31460 putative transport protein
YP_001370980.1	PFAM: Gluconate transporter; Citrate transporter; KEGG: bja:bll7963 hypothetical protein
YP_001370981.1	PFAM: HupE/UreJ protein; KEGG: atc:AGR_C_4126 hupe protein precursor
YP_001370982.1	PFAM: Urease accessory protein UreF; KEGG: azo:azo3502 probable urease accessory protein UreF
YP_001370983.1	PFAM: Urea transporter; KEGG: noc:Noc_2884 UreA transporter
YP_001370984.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
YP_001370985.1	TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit; KEGG: reu:Reut_A0994 urease, beta subunit
YP_001370986.1	TIGRFAM: urease, gamma subunit; PFAM: Urease gamma subunit region; KEGG: mfa:Mfla_1769 urease, gamma subunit
YP_001370987.1	PFAM: Urease accessory protein UreD; KEGG: dar:Daro_1430 urease accessory protein UreD
YP_001370988.1	PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: bbk:BARBAKC583_0646 putative lipoprotein
YP_001370989.1	PFAM: membrane protein of uknown function UCP014873; KEGG: sme:SMc01723 hypothetical protein
YP_001370990.1	KEGG: mlo:mlr1995 hypothetical protein
YP_001370991.1	PFAM: 17 kDa surface antigen; KEGG: bmb:BruAb1_1740 lipoprotein, hypothetical
YP_001370992.1	PFAM: protein of unknown function UPF0118; KEGG: sme:SMa1676 hypothetical protein
YP_001370993.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: gbe:GbCGDNIH1_1040 prolidase
YP_001370994.1	KEGG: pau:PA14_04180 hypothetical protein
YP_001370995.1	KEGG: sit:TM1040_0076 lipopolysaccharide biosynthesis protein-like
YP_001370996.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pcu:pc0179 hypothetical protein
YP_001370997.1	PFAM: Methyltransferase type 11; KEGG: sde:Sde_3716 hypothetical protein
YP_001370998.1	TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pho:PH1043 amidohydrolase
YP_001370999.1	PFAM: extracellular solute-binding protein family 3; KEGG: bms:BR0955 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001371000.1	PFAM: helix-turn-helix domain protein; KEGG: mlo:msl5762 transcriptional regulatory protein
YP_001371001.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reh:H16_B1200 putative MFS transporter
YP_001371002.1	PFAM: carbohydrate kinase FGGY; KEGG: rme:Rmet_5445 carbohydrate kinase, FGGY
YP_001371003.1	PFAM: FAD dependent oxidoreductase; KEGG: rme:Rmet_5444 FAD dependent oxidoreductase
YP_001371004.1	PFAM: FAD linked oxidase domain protein; KEGG: rme:Rmet_5443 FAD linked oxidase-like protein
YP_001371005.1	PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: bur:Bcep18194_B2079 glycerol-3-phosphate responsive antiterminator (mRNA-binding)-like
YP_001371006.1	KEGG: gox:GOX2457 phage DNA Packaging protein
YP_001371007.1	PFAM: transposase IS3/IS911 family protein; KEGG: pen:PSEEN3943 transposase, IS3 family (orf 1)
YP_001371008.1	PFAM: Integrase catalytic region; KEGG: gbe:GbCGDNIH1_1790 transposase
YP_001371009.1	KEGG: gox:GOX2729 transposase
YP_001371011.1	PFAM: Endoribonuclease L-PSP; KEGG: bxe:Bxe_B2495 hypothetical protein
YP_001371012.1	PFAM: regulatory protein IclR; KEGG: pst:PSPTO_2525 transcriptional regulator, IclR family
YP_001371013.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppu:PP_4455 opine ABC transporter, periplasmic binding protein, putative
YP_001371014.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_4339 binding-protein-dependent transport systems inner membrane component
YP_001371015.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rle:RL4580 putative ATP-binding component of ABC transporter
YP_001371016.1	PFAM: MmgE/PrpD family protein; KEGG: mlo:mlr6217 hypothetical protein
YP_001371017.1	PFAM: extracellular solute-binding protein family 5; KEGG: pol:Bpro_4335 extracellular solute-binding protein, family 5
YP_001371018.1	PFAM: FAD dependent oxidoreductase; KEGG: bpe:BP3677 hypothetical protein
YP_001371019.1	PFAM: PfkB domain protein; KEGG: atc:AGR_L_468 putative carbohydrate kinase
YP_001371020.1	PFAM: TOBE domain protein; Transport-associated OB domain protein; KEGG: atc:AGR_L_466 sugar ABC transporter, ATP-binding protein
YP_001371021.1	KEGG: rle:pRL100020 hypothetical protein
YP_001371022.1	KEGG: rle:pRL100469 hypothetical protein
YP_001371023.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_466 sugar ABC transporter, ATP-binding protein
YP_001371024.1	TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: atc:AGR_L_463 argininosuccinate lyase (arginosuccinase) (ASAL)
YP_001371025.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_460 lactose transport system permease protein lacG
YP_001371026.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_458 sugar ABC transporter, permease protein
YP_001371027.1	PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_456 sugar transport system (sugar-binding protein)
YP_001371028.1	PFAM: ROK family protein; KEGG: atc:AGR_L_455 hypothetical protein
YP_001371029.1	PFAM: LmbE family protein; KEGG: atc:AGR_L_453 hypothetical protein
YP_001371030.1	KEGG: pde:Pden_4065 hypothetical protein
YP_001371031.1	PFAM: Flp/Fap pilin component; KEGG: pilA; pilus subunit protein PilA; K02651 pilus assembly protein PilA
YP_001371032.1	KEGG: bme:BMEI1165 hypothetical membrane spanning protein
YP_001371033.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: mlo:mlr8466 hypothetical protein
YP_001371034.1	catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
YP_001371035.1	PFAM: CoA-binding domain protein; KEGG: rle:RL1678 hypothetical protein
YP_001371036.1	PFAM: thioesterase superfamily protein; KEGG: bmb:BruAb1_0806 hypothetical protein
YP_001371037.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_001371038.1	forms a direct contact with the tRNA during translation
YP_001371039.1	TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family; PFAM: acid phosphatase (Class B); KEGG: msu:MS1438 hypothetical protein
YP_001371040.1	KEGG: ret:RHE_CH01072 hypothetical protein
YP_001371041.1	catalyzes the formation of putrescine from agmatine
YP_001371042.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis
YP_001371043.1	PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: mlo:mll8451 streptomycin phosphotransferase, streptomycin-resistance
YP_001371044.1	PFAM: cytochrome oxidase assembly; KEGG: bmb:BruAb1_0801 cytochrome c oxidase assembly protein, hypothetical
YP_001371045.1	KEGG: bmb:BruAb1_0800 hypothetical protein
YP_001371046.1	KEGG: mlo:mll8447 hypothetical protein
YP_001371047.1	TIGRFAM: exopolysaccharide transport protein family; PFAM: lipopolysaccharide biosynthesis protein; KEGG: mlo:mlr8439 succinoglycan transport protein ExoP
YP_001371048.1	PFAM: polysaccharide export protein; KEGG: bmb:BruAb1_0798 capsule polysaccharide export protein, hypothetical
YP_001371049.1	PFAM: glycosyl transferase group 1; KEGG: mlo:mll8436 putative transferase
YP_001371050.1	KEGG: pde:Pden_4725 hypothetical protein
YP_001371051.1	PFAM: sugar transferase; KEGG: bms:BR0781 bacterial sugar transferase
YP_001371052.1	KEGG: mlo:mll8434 hypothetical protein
YP_001371053.1	PFAM: protein of unknown function UPF0060; KEGG: rpb:RPB_2370 protein of unknown function UPF0060
YP_001371054.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mes:Meso_1253 short-chain dehydrogenase/reductase SDR
YP_001371055.1	PFAM: beta-lactamase domain protein; KEGG: atc:AGR_C_1105 hypothetical protein
YP_001371056.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
YP_001371057.1	PFAM: small multidrug resistance protein; KEGG: bms:BR0780 sugE protein
YP_001371058.1	PFAM: regulatory protein MerR; KEGG: bmb:BruAb1_0794 hypothetical protein
YP_001371060.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_001371061.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_001371062.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_001371063.1	KEGG: bmb:BruAb1_0790 hypothetical protein
YP_001371064.1	PFAM: Ubiquinol-cytochrome C chaperone; KEGG: bmb:BruAb1_0789 hypothetical protein
YP_001371065.1	PFAM: SmpA/OmlA domain protein; KEGG: bms:BR0772 hypothetical protein
YP_001371066.1	pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient
YP_001371067.1	Regulates rRNA biosynthesis by transcriptional antitermination
YP_001371068.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_001371069.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_001371070.1	TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: bmb:BruAb1_0783 RibD, riboflavin biosynthesis protein RibD
YP_001371071.1	PFAM: ATP-cone domain protein; KEGG: bmb:BruAb1_0782 hypothetical protein
YP_001371072.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_001371073.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bmb:BruAb1_0779 peptidoglycan-binding protein, hypothetical
YP_001371074.1	PFAM: regulatory protein MarR; KEGG: bmb:BruAb1_0777 transcriptional regulator, MarR Family
YP_001371075.1	PFAM: protein of unknown function DUF411; KEGG: abo:ABO_2356 predicted metal-binding protein
YP_001371076.1	KEGG: bmb:BruAb1_0776 hypothetical protein
YP_001371077.1	catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA
YP_001371078.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_001371079.1	PFAM: RDD domain containing protein; KEGG: bmb:BruAb1_0773 hypothetical protein
YP_001371080.1	Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate
YP_001371081.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_001371082.1	KEGG: bms:BR0752 hypothetical protein
YP_001371083.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_001371084.1	TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: bmb:BruAb1_0767 Rnd, ribonuclease D
YP_001371085.1	PFAM: Ppx/GppA phosphatase; KEGG: bme:BMEI1204 exopolyphosphatase
YP_001371086.1	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate
YP_001371087.1	KEGG: bmb:BruAb1_0764 hypothetical protein
YP_001371088.1	catalyzes the formation of catechol from salicylate
YP_001371089.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bxe:Bxe_A3278 putative 3-demethylubiquinone-93-methyltransferase protein
YP_001371090.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpe:RPE_1371 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001371091.1	PFAM: helix-turn-helix HxlR type; KEGG: bpa:BPP3401 putative transcriptional regulator
YP_001371092.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bte:BTH_II0560 hypothetical protein
YP_001371093.1	PFAM: regulatory protein ArsR; KEGG: sus:Acid_1896 transcriptional regulator, ArsR family
YP_001371094.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ava:Ava_1487 GCN5-related N-acetyltransferase
YP_001371095.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: atc:AGR_C_4132 hypothetical protein
YP_001371096.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_0762 amino acid ABC transporter, ATP-binding protein
YP_001371097.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0744 amino acid ABC transporter, permease protein
YP_001371098.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bme:BMEI1210 general L-amino acid transport system permease protein AapQ
YP_001371099.1	TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bms:BR0741 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001371100.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: bms:BR0740 PAP2 family protein
YP_001371101.1	catalyzes the formation of L-homocysteine from cystathionine
YP_001371102.1	PFAM: protein of unknown function UPF0118; KEGG: sme:SMa0136 hypothetical protein
YP_001371103.1	PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: pde:Pden_3087 extracellular solute-binding protein, family 3
YP_001371104.1	KEGG: sme:SMc04246 hypothetical transmembrane signal peptide protein
YP_001371106.1	KEGG: bms:BR0737 lipoprotein, putative
YP_001371107.1	PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: bms:BR0736 hypothetical protein
YP_001371109.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: afu:AF0266 hypothetical protein
YP_001371110.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0248 transcriptional regulator, LysR family
YP_001371111.1	PFAM: ETC complex I subunit conserved region; KEGG: bmb:BruAb1_0738 oxidoreductase, hypothetical
YP_001371112.1	KEGG: atc:AGR_C_2277 hypothetical protein
YP_001371113.1	KEGG: bmb:BruAb1_0735 hypothetical protein
YP_001371114.1	KEGG: bmb:BruAb1_0733 hypothetical protein
YP_001371115.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bms:BR0715 epimerase/dehydratase family protein, putative
YP_001371116.1	KEGG: bms:BR0714 hypothetical protein
YP_001371117.1	PFAM: protein of unknown function UPF0118; KEGG: bms:BR0713 permease, putative
YP_001371118.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_001371119.1	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate
YP_001371120.1	PFAM: protein of unknown function DUF992; KEGG: bmb:BruAb1_0727 hypothetical protein
YP_001371121.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: bmb:BruAb1_0726 oxidoreductase, molybdopterin-binding, hypothetical
YP_001371122.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bms:BR0706 hypothetical protein
YP_001371123.1	PFAM: protein of unknown function DUF519; KEGG: bmf:BAB1_0726 N-6 adenine-specific DNA methylase:protein of unknown function DUF519
YP_001371124.1	KEGG: bms:BR0704 hypothetical protein
YP_001371125.1	PFAM: ribonuclease T2; KEGG: bms:BR0703 ribonuclease T2 family protein
YP_001371126.1	PFAM: Glutathione S-transferase domain; KEGG: bmb:BruAb1_0721 glutathione S-transferase family protein
YP_001371127.1	PFAM: beta-lactamase; KEGG: sme:SMb21600 putative exported beta-lactamase protein
YP_001371128.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_4053 transcriptional activator AmpR
YP_001371129.1	PFAM: OmpA domain protein transmembrane region-containing protein; porin; KEGG: bmb:BruAb1_0720 outer-membrane protein, 25 kDa
YP_001371130.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bme:BMEI1250 short chain dehydrogenase
YP_001371131.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_001371132.1	TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bmb:BruAb1_0717 PgsA, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_001371133.1	TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: bmb:BruAb1_0716 MoaD, molybdopterin converting factor, subunit 1
YP_001371134.1	PFAM: molybdopterin biosynthesis MoaE protein; KEGG: bmb:BruAb1_0715 MoaE, molybdopterin converting factor, subunit 2
YP_001371135.1	PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bms:BR0695 hypothetical protein
YP_001371136.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
YP_001371137.1	PFAM: DinB family protein; KEGG: bmb:BruAb1_0712 hypothetical protein
YP_001371138.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BR0692 ABC transporter, ATP-binding protein
YP_001371140.1	KEGG: bms:BR0691 hypothetical protein
YP_001371141.1	binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB
YP_001371142.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
YP_001371143.1	PFAM: permease YjgP/YjgQ family protein; KEGG: bms:BR0687 hypothetical protein
YP_001371144.1	PFAM: permease YjgP/YjgQ family protein; KEGG: bms:BR0686 hypothetical protein
YP_001371145.1	PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: bme:BMEI1264 organic solvent tolerance protein
YP_001371146.1	PFAM: SurA domain; KEGG: bmb:BruAb1_0703 peptidyl-prolyl cis-trans isomerase, hypothetical
YP_001371147.1	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate)
YP_001371148.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
YP_001371149.1	PFAM: peptidase M23B; KEGG: bmb:BruAb1_0700 peptidase, M23/M37 family
YP_001371150.1	TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: bms:BR0680 rarD protein
YP_001371151.1	TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: bmb:BruAb1_0698 2-isopropylmalate synthase/homocitrate synthase family protein
YP_001371152.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mes:Meso_0968 glutathione-dependent formaldehyde-activating, GFA
YP_001371153.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_001371154.1	KEGG: bmb:BruAb1_0692 hypothetical protein
YP_001371155.1	PFAM: protein of unknown function DUF159; KEGG: bmb:BruAb1_0690 hypothetical protein
YP_001371156.1	PFAM: NUDIX hydrolase; KEGG: bmb:BruAb1_0689 MutT/nudix family protein
YP_001371157.1	KEGG: bms:BR0671 hypothetical protein
YP_001371158.1	KEGG: bmb:BruAb1_0687 hypothetical protein
YP_001371159.1	KEGG: bms:BR0669 hypothetical protein
YP_001371160.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: ret:RHE_PF00313 probable transcriptional regulator protein, AraC family
YP_001371161.1	PFAM: isochorismatase hydrolase; KEGG: rru:Rru_A0757 isochorismatase hydrolase
YP_001371162.1	PFAM: YCII-related; KEGG: smu:SMU.2121c hypothetical protein
YP_001371163.1	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
YP_001371164.1	PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: bmb:BruAb1_0684 aminomethyltransferase, hypothetical
YP_001371165.1	KEGG: bmb:BruAb1_0683 hypothetical protein
YP_001371166.1	KEGG: bmb:BruAb1_0682 hypothetical protein
YP_001371167.1	involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA
YP_001371168.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome
YP_001371169.1	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity
YP_001371170.1	TIGRFAM: signal peptidase I; PFAM: peptidase S24 S26A and S26B; KEGG: bmb:BruAb1_0677 signal peptidase I
YP_001371171.1	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids
YP_001371172.1	KEGG: bmb:BruAb1_0675 hypothetical protein
YP_001371173.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bme:BMEI1291 transcriptional regulator, AraC family
YP_001371174.1	PFAM: major facilitator superfamily MFS_1; KEGG: bmb:BruAb1_0673 Fsr, fosmidomycin resistance protein
YP_001371175.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_001371176.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bms:BR0654 transcriptional regulator, Crp/Fnr family
YP_001371177.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_001371178.1	KEGG: bmb:BruAb1_0669 RelA/SpoT family protein; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region
YP_001371179.1	Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
YP_001371180.1	PFAM: protein of unknown function DUF88; KEGG: bmb:BruAb1_0666 hypothetical protein
YP_001371181.1	PFAM: Uracil-DNA glycosylase superfamily; KEGG: bmb:BruAb1_0665 SPO1 DNA polymerase-related protein
YP_001371182.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_001371183.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_001371184.1	PFAM: Lytic transglycosylase catalytic; KEGG: bmb:BruAb1_0661 transglycosylase SLT domain protein
YP_001371185.1	KEGG: bmb:BruAb1_0660 hypothetical protein
YP_001371186.1	KEGG: bmb:BruAb1_0658 hypothetical protein
YP_001371187.1	PFAM: porin; KEGG: bmb:BruAb1_0657 Omp2b, porin
YP_001371188.1	PFAM: porin; KEGG: bmb:BruAb1_0657 Omp2b, porin
YP_001371189.1	PFAM: phage integrase family protein; KEGG: bmb:BruAb1_0654 site-specific recombinase, phage integrase family
YP_001371190.1	catalyzes the formation of histidinol phosphate and 2-oxoglutarate from glutamate and imidazole acetol-phosphate
YP_001371191.1	PFAM: protein of unknown function DUF423; KEGG: bmb:BruAb1_0652 hypothetical protein
YP_001371192.1	KEGG: mlo:mlr3880 hypothetical protein
YP_001371193.1	PFAM: protein of unknown function DUF161; KEGG: bms:BR0630 hypothetical protein
YP_001371194.1	KEGG: bms:BR0629 hypothetical protein
YP_001371195.1	KEGG: bmb:BruAb1_0646 hypothetical protein
YP_001371196.1	PFAM: Glutathione S-transferase domain; KEGG: bme:BMEI1316 glutathione S-transferase
YP_001371197.1	Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile
YP_001371198.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bmb:BruAb1_0641 AP endonuclease family 1 domain protein
YP_001371199.1	PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: bme:BMEI1320 electron transfer flavoprotein-ubiquinone oxidoreductase precursor
YP_001371200.1	TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: bmb:BruAb1_0639 phage SPO1 DNA polymerase-related protein
YP_001371201.1	PFAM: major facilitator superfamily MFS_1; KEGG: bmb:BruAb1_0638 transporter
YP_001371202.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bmf:BAB1_0642 protein of unknown function DUF6
YP_001371203.1	TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: bmb:BruAb1_0636 PepN, aminopeptidase N
YP_001371204.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: bmb:BruAb1_0635 histidine kinase
YP_001371205.1	catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme
YP_001371206.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bme:BMEI1328 sensory transduction histidine kinase
YP_001371207.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bmb:BruAb1_0631 DNA-binding response regulator
YP_001371208.1	TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bmb:BruAb1_0630 serine protease
YP_001371209.1	PFAM: cytochrome C biogenesis protein; KEGG: bme:BMEI1331 cytochrome C-type biogenesis protein CycL precursor
YP_001371210.1	TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: bmb:BruAb1_0628 CcmF, cytochrome c-type biogenesis protein CcmF
YP_001371211.1	CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane
YP_001371212.1	KEGG: bms:BR0607 cytochrome c-type biogenesis protein, putative
YP_001371213.1	KEGG: bmb:BruAb1_0625 outer membrane lipoprotein-related protein
YP_001371214.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bmb:BruAb1_0624 sensor histidine kinase
YP_001371215.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bmb:BruAb1_0623 DNA-binding response regulator
YP_001371216.1	KEGG: bme:BMEI1338 hypothetical protein
YP_001371217.1	KEGG: bmb:BruAb1_0608 hypothetical protein
YP_001371218.1	TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bmb:BruAb1_0604 penicillin-binding protein
YP_001371219.1	PFAM: protein of unknown function DUF1214; KEGG: bmb:BruAb1_0603 hypothetical protein
YP_001371220.1	KEGG: bmb:BruAb1_0602 hypothetical protein
YP_001371221.1	KEGG: bms:BR0580 hypothetical protein
YP_001371222.1	PFAM: protein of unknown function DUF1491; KEGG: bms:BR0579 hypothetical protein
YP_001371223.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bmb:BruAb1_0599 hypothetical peptidoglycan-binding protein
YP_001371224.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bms:BR0577 sensor histidine kinase
YP_001371225.1	KEGG: bms:BR0575 hypothetical protein
YP_001371226.1	PFAM: Fe-S metabolism associated SufE; KEGG: bmb:BruAb1_0596 hypothetical protein
YP_001371227.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
YP_001371228.1	KEGG: bme:BMEI1361 hypothetical cytosolic protein
YP_001371229.1	PFAM: Chromosomal replication initiator DnaA domain; KEGG: bmb:BruAb1_0593 hypothetical protein
YP_001371230.1	KEGG: bme:BMEI1363 hypothetical cytosolic protein
YP_001371231.1	PFAM: ROSMUCR transcriptional regulator; KEGG: bms:BR0569 transcriptional regulator, Ros/MucR family
YP_001371232.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: bmb:BruAb1_0590 PtrB, protease
YP_001371233.1	KEGG: bme:BMEI1366 hypothetical membrane spanning protein
YP_001371234.1	PFAM: AMP-dependent synthetase and ligase; KEGG: azo:azo3066 long-chain fatty-acid-CoA ligase
YP_001371235.1	KEGG: bmb:BruAb1_0584 hypothetical protein
YP_001371236.1	PFAM: cytochrome c class II; KEGG: mlo:mlr7638 cytochrome c556
YP_001371237.1	KEGG: mlo:mlr7639 cytochrome c-553
YP_001371238.1	PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: bmb:BruAb1_0585 hypothetical protein
YP_001371239.1	KEGG: sde:Sde_1843 hypothetical protein
YP_001371240.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bmb:BruAb1_0586 hypothetical protein
YP_001371241.1	TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bmb:BruAb1_0587 haloacid dehalogenase
YP_001371242.1	PFAM: manganese and iron superoxide dismutase; KEGG: bme:BMEI1367 superoxide dismutase (MN)
YP_001371243.1	PFAM: major facilitator superfamily MFS_1; KEGG: bme:BMEI1372 cyanate transport protein CynX
YP_001371244.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bmb:BruAb1_0582 transcriptional regulator, GntR family
YP_001371245.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: bmb:BruAb1_0581 transporter
YP_001371246.1	TIGRFAM: putative addiction module antidote; PFAM: SpoVT/AbrB domain protein; KEGG: bmb:BruAb1_0580 transcriptional regulator, AbrB family
YP_001371247.1	TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: bmb:BruAb1_0579 death-on-curing family protein
YP_001371248.1	PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: bme:BMEI1377 transcription elongation factor GreB
YP_001371249.1	HTH-type; bet1; Repressor involved in choline regulation of the bet genes
YP_001371250.1	catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine
YP_001371251.1	catalyzes the formation of betaine from betaine aldehyde
YP_001371252.1	PFAM: transposase IS3/IS911 family protein; KEGG: gox:GOX2589 transposase
YP_001371253.1	TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20; KEGG: sme:SMa0233 probable OtsA trehalose-6-phosphate synthase
YP_001371254.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: rle:pRL100466 putative trehalose-phosphatase
YP_001371255.1	TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; KEGG: bme:BMEII0900 mannose-6-phosphate isomerase / mannose-1-phosphate guanylyl transferase (GDP)
YP_001371256.1	PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: bmb:BruAb2_0833 hypothetical phosphoglucomutase
YP_001371257.1	KEGG: nha:Nham_4172 ISSpo6, transposase orf A
YP_001371258.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mlo:mlr7553 dTDP-6-deoxy-L-mannose-dehydrogenase
YP_001371259.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mlo:mlr7552 dTDP-D-glucose-4,6-dehydratase
YP_001371260.1	TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: mlo:mlr7551 dTDP-6-deoxy-D-glucose-3,5-epimerase
YP_001371261.1	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mlo:mlr7550 glucose-1-phosphate thymidylyltransferase
YP_001371262.1	PFAM: glycosyl transferase family 2; KEGG: bch:Bcen2424_0884 glycosyl transferase, family 2
YP_001371263.1	KEGG: rru:Rru_A1516 transposase and inactivated derivatives-like
YP_001371264.1	PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMc03301 putative transposase number 1 for insertion sequence ISRM26
YP_001371265.1	PFAM: IS66 Orf2 family protein; KEGG: sme:SMc03300 putative transposase number 2 for insertion sequence ISRM26
YP_001371266.1	PFAM: transposase IS66; KEGG: sme:SMc03298 putative transposase number 3 for insertion sequence ISRM26
YP_001371267.1	KEGG: sme:SMa1608 hypothetical protein
YP_001371268.1	PFAM: transposase IS66; KEGG: sme:SMa2171 hypothetical protein
YP_001371269.1	PFAM: IS66 Orf2 family protein; KEGG: pde:Pden_0067 IS66 Orf2 family protein
YP_001371270.1	PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMa2191 hypothetical protein
YP_001371271.1	PFAM: transposase IS4 family protein; KEGG: ret:RHE_PA00092 probable insertion sequence transposase protein, IS4 family
YP_001371272.1	KEGG: cch:Cag_1481 glycosyltransferase-like
YP_001371273.1	KEGG: bxe:Bxe_A3033 hypothetical protein
YP_001371274.1	PFAM: transposase IS3/IS911 family protein; KEGG: gox:GOX2589 transposase
YP_001371275.1	KEGG: bpm:BURPS1710b_3154 putative glycosyl transferase
YP_001371277.1	KEGG: pin:Ping_3459 methyltransferase type 11
YP_001371278.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xft:PD1950 ABC transporter ATP-binding protein
YP_001371279.1	PFAM: ABC-2 type transporter; KEGG: xft:PD1949 ABC transporter permease protein
YP_001371280.1	PFAM: metallophosphoesterase; KEGG: ajs:Ajs_0506 metallophosphoesterase
YP_001371281.1	PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMc03278 putative transposase number 1 for insertion sequence ISRM28
YP_001371282.1	PFAM: IS66 Orf2 family protein; KEGG: sme:SMc03279 putative transposase number 2 for insertion sequence ISRM28
YP_001371283.1	PFAM: transposase IS66; KEGG: bms:BRA0556 IS66 family element, orf3, putative
YP_001371284.1	TIGRFAM: yecA family protein; KEGG: sme:SMc03284 hypothetical/unknown protein
YP_001371285.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pmc:P9515_14061 hypothetical protein
YP_001371286.1	PFAM: GtrA family protein; KEGG: cac:CAC1012 uncharacterized membrane protein, homolog of YNGA/YWCD B.suntilis
YP_001371287.1	PFAM: phosphoribulokinase/uridine kinase; KEGG: pmc:P9515_14051 hypothetical protein
YP_001371288.1	PFAM: class II aldolase/adducin family protein; KEGG: jan:Jann_1395 class II aldolase/adducin-like
YP_001371289.1	KEGG: pmc:P9515_14021 hypothetical protein
YP_001371290.1	KEGG: pmc:P9515_14021 hypothetical protein
YP_001371291.1	PFAM: glycosyl transferase family 2; KEGG: pmc:P9515_14031 hypothetical protein
YP_001371292.1	KEGG: pmc:P9515_14041 hypothetical protein
YP_001371293.1	KEGG: rle:pRL100020 hypothetical protein
YP_001371294.1	KEGG: rle:pRL100469 hypothetical protein
YP_001371295.1	KEGG: rle:pRL100020 hypothetical protein
YP_001371296.1	KEGG: rle:pRL100469 hypothetical protein
YP_001371297.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bms:BR0550 transcriptional regulator, AraC family
YP_001371299.1	PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: osa:4333153 Os03g0425200
YP_001371300.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sme:SMb20977 putative transcriptional regulator, LacI family protein
YP_001371301.1	PFAM: extracellular solute-binding protein family 3; KEGG: sme:SMb20976 putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor
YP_001371302.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20975 putative amino acid uptake ABC transporter permease protein
YP_001371303.1	PFAM: glycoside hydrolase family 1; KEGG: sma:SAV1801 putative beta-glucosidase
YP_001371304.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sme:SMb20974 putative oxidoreductase protein
YP_001371305.1	TIGRFAM: outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat protein; PFAM: Pertactin; Autotransporter beta- domain protein; KEGG: bms:BRA0173 outer membrane autotransporter
YP_001371306.1	PFAM: peptidase M24; KEGG: atc:AGR_L_3328 hypothetical protein
YP_001371307.1	PFAM: extracellular solute-binding protein family 5; KEGG: mes:Meso_0459 extracellular solute-binding protein, family 5
YP_001371308.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_0460 binding-protein-dependent transport systems inner membrane component
YP_001371309.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_0461 binding-protein-dependent transport systems inner membrane component
YP_001371310.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mes:Meso_0462 ABC transporter related
YP_001371311.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mes:Meso_0463 ABC transporter related
YP_001371312.1	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pfl:PFL_4080 RNA polymerase sigma-70 factor, ECF subfamily
YP_001371313.1	PFAM: FecR protein; KEGG: rpa:RPA3281 probable FecR, iron siderophore sensor protein
YP_001371314.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: rsp:RSP_4273 TonB-dependent receptor protein
YP_001371315.1	PFAM: periplasmic binding protein; KEGG: rsp:RSP_4272 ABC cobalamin/Fe3+-siderophore transporter, periplasmic ligand binding protein
YP_001371316.1	part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome
YP_001371317.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pst:PSPTO_2803 transcriptional regulator, LysR family
YP_001371318.1	KEGG: reu:Reut_B5832 hypothetical protein
YP_001371319.1	PFAM: extracellular solute-binding protein family 5; KEGG: vei:Veis_0409 extracellular solute-binding protein, family 5
YP_001371320.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll5126 ABC transporter, permease protein
YP_001371321.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0411 binding-protein-dependent transport systems inner membrane component
YP_001371322.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_0412 ABC transporter related
YP_001371323.1	PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: vei:Veis_0413 peptidase S15
YP_001371324.1	PFAM: Hemolysin-type calcium-binding region; KEGG: sme:SMa2111 hypothetical protein
YP_001371325.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01651 putative transcription regulator protein
YP_001371326.1	PFAM: extracellular solute-binding protein family 1; KEGG: rle:RL4190 putative solute-binding component of ABC transporter
YP_001371327.1	TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rle:RL4191 putative ATP-binding component of ABC transporter
YP_001371328.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4192 putative transmembrane component of ABC transporter
YP_001371329.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4193 putative transmembrane component of ABC transporter
YP_001371330.1	catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation
YP_001371331.1	TIGRFAM: YD repeat protein; KEGG: psb:Psyr_2044 YD repeat
YP_001371333.1	KEGG: sit:TM1040_3109 hypothetical protein
YP_001371334.1	N-acetyldiaminobutyrate dehydratase; catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha,gamma-diaminobutyric acid
YP_001371335.1	PFAM: Amidase; KEGG: bam:Bamb_3988 amidase
YP_001371336.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pfl:PFL_4301 transcriptional regulator, GntR family
YP_001371337.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; SMART: AAA ATPase; KEGG: aci:ACIAD3488 putative amino acid transport protein (ABC superfamily, ATP_bind and membrane)
YP_001371338.1	PFAM: extracellular solute-binding protein family 3; KEGG: bam:Bamb_3990 extracellular solute-binding protein, family 3
YP_001371339.1	PFAM: helix-turn-helix protein RpiR; KEGG: rle:RL4211 putative transcriptional regulator
YP_001371340.1	PFAM: extracellular solute-binding protein family 1; KEGG: mes:Meso_4255 extracellular solute-binding protein, family 1
YP_001371341.1	TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mes:Meso_4252 spermidine/putrescine ABC transporter ATPase subunit
YP_001371342.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_4253 binding-protein-dependent transport systems inner membrane component
YP_001371343.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_4254 binding-protein-dependent transport systems inner membrane component
YP_001371344.1	PFAM: peptidase S58 DmpA; KEGG: atc:AGR_pAT_343 hypothetical protein
YP_001371345.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ret:RHE_CH00612 ribose ABC transporter, substrate-binding protein
YP_001371346.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_CH00613 ribose ABC transporter, ATP-binding protein
YP_001371347.1	PFAM: inner-membrane translocator; KEGG: ret:RHE_CH00614 ribose ABC transporter, permease protein
YP_001371348.1	TIGRFAM: outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat protein; PFAM: Pertactin; Autotransporter beta- domain protein; Haemagluttinin repeat-containing protein; KEGG: bmb:BruAb2_1085 outer membrane autotransporter
YP_001371349.1	PFAM: regulatory protein LacI; KEGG: sme:SMb20483 putative catabolite repressor protein
YP_001371350.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bmb:BruAb2_0915 hypothetical sugar ABC transporter periplasmic sugar-binding protein
YP_001371351.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bme:BMEII0982 galactoside transport ATP-binding protein MglA
YP_001371352.1	PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0913 sugar ABC transporter permease
YP_001371353.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bmb:BruAb2_0912 ribitol dehydrogenase
YP_001371354.1	TIGRFAM: FGGY-family pentulose kinase; PFAM: carbohydrate kinase FGGY; KEGG: bmb:BruAb2_0911 ribitol kinase
YP_001371355.1	TIGRFAM: outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat protein; PFAM: Pertactin; Autotransporter beta- domain protein; KEGG: bms:BRA0173 outer membrane autotransporter
YP_001371356.1	PFAM: FAD dependent oxidoreductase; KEGG: eca:ECA0052 conserved hypothetcial protein
YP_001371357.1	FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_001371358.1	catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate
YP_001371359.1	DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium
YP_001371360.1	catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine
YP_001371361.1	KEGG: bmb:BruAb2_0730 BioB, biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB
YP_001371362.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa1741 putative iron uptake ABC transporter, ATP-binding protein
YP_001371363.1	PFAM: transport system permease protein; inner-membrane translocator; KEGG: pde:Pden_3524 transport system permease protein
YP_001371364.1	PFAM: transport system permease protein; KEGG: sme:SMa1745 putative iron uptake protein
YP_001371365.1	PFAM: periplasmic binding protein; KEGG: pde:Pden_3522 periplasmic binding protein
YP_001371366.1	KEGG: nha:Nham_4172 ISSpo6, transposase orf A
YP_001371367.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMa1749 putative transcriptional regulator
YP_001371368.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: rba:RB11291 similar to mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase
YP_001371369.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1345 ABC transporter permease protein
YP_001371370.1	PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA1346 ABC transporter substrate binding protein
YP_001371371.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa0526 probable maltose/trehalose-like ABC transport protein
YP_001371372.1	PFAM: Lipocalin family protein; KEGG: sat:SYN_00666 lipoprotein
YP_001371373.1	PFAM: aldehyde dehydrogenase; KEGG: atc:AGR_L_75 aldehyde dehydrogenase
YP_001371374.1	TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: atc:AGR_L_76 putative deoxyribose-phosphate aldolase
YP_001371375.1	TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: atc:AGR_L_78 ribokinase
YP_001371376.1	KEGG: atc:AGR_L_80 hypothetical protein
YP_001371377.1	PFAM: inner-membrane translocator; KEGG: atc:AGR_L_81 putative permease component of transport system, probably ribose specific
YP_001371378.1	PFAM: inner-membrane translocator; KEGG: atc:AGR_L_83 putative permease component of transport system, probably ribose specific
YP_001371379.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_85 ABC transporter ATP binding protein
YP_001371380.1	KEGG: atc:AGR_L_86 putative periplasmic binding protein, probable substrate ribose
YP_001371381.1	PFAM: regulatory protein DeoR; regulatory protein DeoR; KEGG: atc:AGR_L_88 deoxyribose operon repressor
YP_001371382.1	PFAM: regulatory protein TetR; KEGG: atc:AGR_L_1093 hypothetical protein
YP_001371383.1	PFAM: major facilitator superfamily MFS_1; KEGG: atc:AGR_L_1094gl hypothetical protein
YP_001371384.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sil:SPO2010 transcriptional regulator, LysR family
YP_001371385.1	PFAM: extracellular solute-binding protein family 3; KEGG: pfl:PFL_2360 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001371386.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_2359 amino acid ABC transporter, permease protein
YP_001371387.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_2358 amino acid ABC transporter
YP_001371388.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_2357 glutamine ABC transporter, ATP-binding protein
YP_001371389.1	KEGG: mlo:mll0108 hypothetical protein
YP_001371390.1	PFAM: aminotransferase class-III; KEGG: mlo:mll0107 aminotransferase
YP_001371391.1	PFAM: protein of unknown function DUF849; KEGG: mlo:mll0106 hypothetical protein
YP_001371392.1	PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mll0104 acetyltransferase
YP_001371393.1	PFAM: histone deacetylase superfamily; KEGG: mlo:mll0103 acetylpolyamine aminohydrolase
YP_001371394.1	KEGG: pde:Pden_0476 thioesterase superfamily protein
YP_001371395.1	PFAM: carbonic anhydrase; KEGG: bms:BRA0788 carbonic anhydrase
YP_001371396.1	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bme:BMEII0825 uracil permease
YP_001371397.1	TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: pde:Pden_2723 selenide, water dikinase
YP_001371398.1	PFAM: transglutaminase domain protein; KEGG: azo:azo0103 conserved hypothetical secreted protein
YP_001371399.1	PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: sme:SMa0002 probable FdoG formate dehydrogenase-O alpha subunit
YP_001371400.1	TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: sme:SMa0002 probable FdoG formate dehydrogenase-O alpha subunit
YP_001371401.1	TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Formate dehydrogenase transmembrane domain protein; KEGG: sme:SMa0005 probable FdoH formate dehydrogenase-O, beta subunit
YP_001371402.1	TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: sme:SMa0007 probable FdoI formate dehydrogenase-O,gamma subunit
YP_001371403.1	TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; KEGG: sme:SMa0009 probable FdhE formate formation
YP_001371404.1	catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis
YP_001371405.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: sme:SMa0013 hypothetical protein
YP_001371406.1	TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: sme:SMa0015 SelB selenocysteine-specific elongation factor
YP_001371407.1	KEGG: bme:BMEII0989 hypothetical protein
YP_001371408.1	PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bms:BRA0257 hypothetical protein
YP_001371409.1	KEGG: bmb:BruAb2_0923 hypothetical protein
YP_001371410.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pde:Pden_4740 two component transcriptional regulator, LuxR family
YP_001371411.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pde:Pden_4741 integral membrane sensor signal transduction histidine kinase
YP_001371412.1	PFAM: oxidoreductase molybdopterin binding; KEGG: pde:Pden_4742 hypothetical protein
YP_001371413.1	TIGRFAM: outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; Haemagluttinin repeat-containing protein; KEGG: bam:Bamb_4364 outer membrane autotransporter barrel domain
YP_001371414.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: sme:SMc01095 probable multidrug-efflux system transmembrane protein
YP_001371415.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sme:SMc01094 putative multidrug efflux system transmembrane protein
YP_001371416.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: sme:SMc01093 putative esterase protein
YP_001371417.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01092 putative transcription regulator protein
YP_001371419.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ret:RHE_CH03135 probable CDP-alcohol phosphatidyltransferase protein
YP_001371420.1	PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_CH03134 putative hydrolase protein
YP_001371421.1	PFAM: Dual specificity protein phosphatase; KEGG: ret:RHE_CH03133 putative phosphatase protein
YP_001371422.1	KEGG: ret:RHE_CH03132 hypothetical protein
YP_001371423.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: pae:PA2537 probable acyltransferase
YP_001371424.1	PFAM: phosphatidate cytidylyltransferase; KEGG: xcc:XCC0506 phosphatidate cytidylyltransferase
YP_001371425.1	KEGG: atc:AGR_C_4118 hypothetical protein
YP_001371426.1	upregulated by FixLJ/FixK under oxygen limitation; involved in regulation of genes involved in carbon and amino acid metabolism
YP_001371427.1	TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: bme:BMEII0948 nitrite extrusion protein
YP_001371428.1	TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: bms:BRA0299 respiratory nitrate reductase, alpha subunit
YP_001371429.1	TIGRFAM: nitrate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bmb:BruAb2_0883 NarH, respiratory nitrate reductase, beta subunit
YP_001371430.1	TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: bms:BRA0297 respiratory nitrate reductase, delta subunit
YP_001371431.1	TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit; KEGG: bmb:BruAb2_0885 NarI, respiratory nitrate reductase, gamma subunit
YP_001371432.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bms:BRA0295 peptidyl-prolyl cis-trans isomerase, putative
YP_001371433.1	KEGG: bmb:BruAb2_0887 hypothetical protein
YP_001371434.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pde:Pden_4868 transcriptional regulator, GntR family
YP_001371435.1	PFAM: dihydrodipicolinate synthetase; KEGG: mlo:mll6811 dihydroxydipicolinate synthase
YP_001371436.1	PFAM: Malate/L-lactate dehydrogenase; KEGG: atc:AGR_L_410 probable L-malate dehydrogenase
YP_001371437.1	TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain protein; KEGG: bme:BMEII0965 pseudoazurin
YP_001371438.1	PFAM: NnrS family protein; KEGG: bms:BRA0283 putative uncharacterized protein involved in response to NO
YP_001371439.1	TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: rru:Rru_A0595 transketolase
YP_001371440.1	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate
YP_001371441.1	class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis
YP_001371442.1	catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity
YP_001371443.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
YP_001371444.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: bmb:BruAb2_0364 transcriptional regulator, DeoR family
YP_001371445.1	PFAM: putative sugar-binding domain protein; KEGG: bmb:BruAb2_0365 erythritol transcriptional regulator
YP_001371446.1	KEGG: bmb:BruAb2_0366 EryC, D-erythrulose-1-phosphate dehydrogenase
YP_001371447.1	in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane
YP_001371448.1	PFAM: carbohydrate kinase FGGY; KEGG: bmb:BruAb2_0368 EryA, erythritol kinase
YP_001371449.1	KEGG: bmb:BruAb2_0370 hypothetical protein
YP_001371450.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA0860 ribose ABC transporter, ATP-binding protein
YP_001371451.1	PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0372 ribose ABC transporter, permease protein
YP_001371452.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bmb:BruAb2_0373 RbsB-2, ribose ABC transporter, periplasmic D-ribose-binding protein
YP_001371453.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: bmb:BruAb2_0374 transcriptional regulator, DeoR family
YP_001371454.1	PFAM: carbohydrate kinase FGGY; KEGG: rle:pRL120198 putative L-xylulose kinase
YP_001371455.1	PFAM: FAD dependent oxidoreductase; KEGG: rle:pRL120197 putative glycerol-3-phosphate dehydrogenase
YP_001371456.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: bmb:BruAb2_0756 hypothetical protein
YP_001371457.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: rle:RL3533 putative solute-binding component of ABC transporter
YP_001371458.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: mlo:mll5038 transcription regulator
YP_001371459.1	PFAM: protein of unknown function DUF849; KEGG: sme:SMc01637 hypothetical protein
YP_001371460.1	Converts (S)-3-hydroxyacyl-CoA to 3-oxyacyl-CoA; may also act as a thioesterase
YP_001371461.1	PFAM: regulatory protein TetR; Transcriptional regulator TetR; KEGG: bmb:BruAb2_0760 transcriptional regulator, TetR family
YP_001371462.1	PFAM: secretion protein HlyD family protein; KEGG: bmb:BruAb2_0759 HlyD family secretion protein
YP_001371463.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bme:BMEII0802 daunorubicin resistance ATP-binding protein DrrA
YP_001371464.1	PFAM: ABC-2 type transporter; KEGG: bmb:BruAb2_0757 ABC transporter, permease protein
YP_001371465.1	PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_A1695 MFS transporter, DHA1 family
YP_001371466.1	PFAM: aldo/keto reductase; KEGG: mes:Meso_3052 aldo/keto reductase
YP_001371467.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mes:Meso_3053 transcriptional regulator, LysR family
YP_001371468.1	PFAM: ABC transporter related; ABC transporter domain protein; SMART: AAA ATPase; KEGG: bme:BMEII0976 ABC transporter ATP-binding protein
YP_001371469.1	KEGG: bmb:BruAb2_0909 hypothetical protein
YP_001371470.1	PFAM: RES domain protein; KEGG: bmb:BruAb2_0910 hypothetical protein
YP_001371471.1	KEGG: pol:Bpro_1029 putative methylisocitrate lyase
YP_001371472.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mes:Meso_0411 short-chain dehydrogenase/reductase SDR
YP_001371473.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2421 MFS permease
YP_001371474.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bja:blr7971 transcriptional regulatory protein
YP_001371475.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: ppu:PP_1227 hypothetical protein
YP_001371476.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bms:BRA0302 sugar-binding protein, putative
YP_001371477.1	PFAM: extracellular solute-binding protein family 1; KEGG: bmb:BruAb2_0877 sugar ABC transporter, periplasmic sugar-binding protein
YP_001371478.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0305 sugar ABC transporter, permease protein
YP_001371479.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0306 sugar ABC transporter, permease protein
YP_001371480.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bms:BRA0307 sugar ABC transporter, ATP-binding protein
YP_001371481.1	PFAM: protein of unknown function DUF1037; KEGG: bme:BMEII0939 ThuA
YP_001371482.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bmb:BruAb2_0872 oxidoreductase, Gfo/Idh/MocA family
YP_001371483.1	KEGG: pfl:PFL_5633 hypothetical protein
YP_001371484.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: rle:pRL100135 putative 1,3-propanediol dehydrogenase
YP_001371485.1	PFAM: cytochrome c class I; KEGG: sme:SMc01981 putative cytochrome c transmembrane protein
YP_001371486.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: atu:Atu4581 hypothetical protein
YP_001371487.1	TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: atc:AGR_L_1858gl hypothetical protein
YP_001371488.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_3168 short-chain dehydrogenase/reductase SDR
YP_001371489.1	TIGRFAM: glutaredoxin-like protein NrdH; PFAM: glutaredoxin; KEGG: bmb:BruAb2_0867 NrdH, glutaredoxin-like protein NrdH
YP_001371490.1	in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF
YP_001371491.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_001371492.1	B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE
YP_001371493.1	PFAM: peptidase M20; peptidase M42 family protein; KEGG: sme:SMb20466 hypothetical glucanase protein
YP_001371494.1	PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMb20476 putative ABC transporter periplasmic dipeptide-binding protein
YP_001371495.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20477 putative didpeptide ABC transporter permease protein
YP_001371496.1	PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20478 putative dipeptide ABC transporter permease and ATP-binding protein
YP_001371497.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20479 putative dipeptide ABC transporter ATP-binding protein
YP_001371498.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMb20480 putative transcriptional regulator protein
YP_001371499.1	TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: sme:SMb20481 putative asparagine synthetase (glutamine amidotransferase) protein
YP_001371500.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMb20482 hypothetical protein
YP_001371501.1	PFAM: UbiA prenyltransferase; KEGG: bms:BRA0855 hypothetical protein
YP_001371502.1	PFAM: FAD linked oxidase domain protein; KEGG: bmb:BruAb2_0377 oxidoreductase, FAD-binding
YP_001371503.1	KEGG: bmb:BruAb2_0378 hypothetical membrane protein
YP_001371504.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bmb:BruAb2_0379 hypothetical epimerase/dehydratase family protein
YP_001371505.1	PFAM: aminotransferase class-III; KEGG: bms:BRA0851 aminotransferase, class III
YP_001371506.1	KEGG: bms:BRA0850 hypothetical protein
YP_001371507.1	blocks the formation of polar Z-ring septums
YP_001371508.1	TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bms:BRA0322 septum site-determining protein MinD
YP_001371509.1	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell
YP_001371510.1	KEGG: bmb:BruAb2_0857 hypothetical protein
YP_001371511.1	specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport
YP_001371512.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: atc:AGR_C_1690 putative membrane transport protein
YP_001371513.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: ape:APE_0157 hypothetical protein
YP_001371514.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jan:Jann_0308 binding-protein-dependent transport systems inner membrane component
YP_001371515.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: art:Arth_0028 ABC transporter related
YP_001371516.1	PFAM: NMT1/THI5 like domain protein; KEGG: rde:RD1_2344 hypothetical protein
YP_001371517.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: hbu:Hbut_0038 5-formyltetrahydrofolate cyclo-ligase
YP_001371518.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pna:Pnap_4066 transcriptional regulator, RpiR family
YP_001371519.1	PFAM: monooxygenase FAD-binding; KEGG: nwi:Nwi_2327 hypothetical protein
YP_001371520.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc02855 hypothetical protein
YP_001371521.1	PFAM: extracellular solute-binding protein family 5; KEGG: atc:AGR_L_3099 putative ABC transporter
YP_001371522.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_3101 probable peptide ABC transporter permease protein Y4TP
YP_001371523.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_3102 dipeptide abc transporter, dipeptide-binding protein
YP_001371524.1	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
YP_001371525.1	PFAM: Endoribonuclease L-PSP; KEGG: ret:RHE_PE00343 putative translation initiation inhibitor protein, YjgF family
YP_001371526.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: atc:AGR_L_3107 hypothetical protein
YP_001371527.1	TIGRFAM: pyridoxal phosphate-dependent enzyme, putative; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; L-seryl-tRNA selenium transferase; KEGG: atc:AGR_L_3109 selenocysteine synthase
YP_001371528.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: atc:AGR_L_3112 hypothetical ABC transporter ATP-binding protein in bcr 5'region
YP_001371529.1	KEGG: rle:RL4273 putative transmembrane protein
YP_001371530.1	PFAM: Integral membrane protein TerC; KEGG: pau:PA14_31610 putative membrane protein, TerC family
YP_001371531.1	PFAM: protein of unknown function DUF1127; KEGG: bmb:BruAb2_0466 hypothetical protein
YP_001371532.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bme:BMEII0526 transcriptional regulatory protein, LysR family
YP_001371533.1	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
YP_001371534.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: atc:AGR_L_2979 hypothetical protein
YP_001371535.1	TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GCS2; KEGG: bms:BRA0763 glutamate--cysteine ligase
YP_001371536.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_001371537.1	PFAM: regulatory protein MarR; KEGG: bme:BMEII0530 transcriptional regulator, MarR family
YP_001371538.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: bms:BRA0760 hypothetical protein
YP_001371539.1	PFAM: protein of unknown function DUF1656; KEGG: bmb:BruAb2_0473 hypothetical protein
YP_001371540.1	PFAM: secretion protein HlyD family protein; KEGG: bmb:BruAb2_0474 HlyD family secretion protein
YP_001371541.1	PFAM: glutamine amidotransferase class-I; KEGG: mlo:mlr6905 hypothetical protein
YP_001371542.1	KEGG: bmb:BruAb2_0171 hypothetical protein
YP_001371543.1	PFAM: metallophosphoesterase; KEGG: mlo:mll6908 serine/threonine protein phosphatase
YP_001371544.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bmb:BruAb2_0172 transcriptional regulator, GntR family
YP_001371545.1	KEGG: atc:AGR_C_4578 hypothetical protein
YP_001371546.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bms:BRA0178 transcriptional regulator, LysR family
YP_001371547.1	PFAM: FAD linked oxidase domain protein; KEGG: bmb:BruAb2_0175 GlcD, glycolate oxidase, subunit GlcD
YP_001371548.1	PFAM: FAD linked oxidase domain protein; KEGG: bms:BRA0181 glycolate oxidase, subunit GlcE
YP_001371549.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bms:BRA0182 glycolate oxidase, iron-sulfur subunit
YP_001371550.1	PFAM: aldo/keto reductase; KEGG: bmb:BruAb2_0178 oxidoreductase, aldo/keto reductase family
YP_001371551.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bms:BRA0184 hypothetical protein
YP_001371552.1	PFAM: methyladenine glycosylase; KEGG: bmb:BruAb2_0180 DNA-3-methyladenine glycosidase I
YP_001371553.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bms:BRA0186 transporter, LysE family
YP_001371554.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_001371555.1	May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
YP_001371556.1	short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ
YP_001371557.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bja:blr0943 hypothetical protein
YP_001371558.1	PFAM: DoxX family protein; KEGG: bmb:BruAb2_0186 hypothetical protein
YP_001371559.1	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle
YP_001371560.1	KEGG: bms:BRA0193 hypothetical protein
YP_001371561.1	PFAM: NADPH-dependent FMN reductase; KEGG: ret:RHE_CH04003 putative reductase protein
YP_001371562.1	PFAM: helix-turn-helix HxlR type; KEGG: mes:Meso_2124 transcriptional regulator, HxlR family
YP_001371563.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
YP_001371564.1	PFAM: chaperonin Cpn10; KEGG: bmb:BruAb2_0191 GroES
YP_001371565.1	KEGG: mlo:mll8241 hypothetical protein
YP_001371566.1	TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bme:BMEII1045 HAD superfamily protein involved in N-acetyl-glucosamine catabolism
YP_001371567.1	catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities
YP_001371568.1	PFAM: MltA-interacting MipA family protein; KEGG: mlo:mlr8248 hypothetical protein
YP_001371569.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme
YP_001371570.1	KEGG: bmb:BruAb2_0198 hypothetical protein
YP_001371571.1	PFAM: cytochrome B561; KEGG: bms:BRA0204 cytochrome b561, putative
YP_001371572.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bmb:BruAb2_0200 cytidine and deoxycytidylate deaminase family protein
YP_001371573.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bmb:BruAb2_0201 RNA pseudouridylate synthase family protein
YP_001371574.1	TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: bmb:BruAb2_0202 conserved hypothetical protein TIGR00095
YP_001371575.1	PFAM: peptidase M16 domain protein; KEGG: bmb:BruAb2_0203 hypothetical protease
YP_001371576.1	PFAM: peptidase M16 domain protein; KEGG: bme:BMEII1036 zinc protease
YP_001371577.1	PFAM: Patatin; KEGG: bmb:BruAb2_0205 hypothetical protein
YP_001371578.1	TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: bms:BRA0210 glutathione-regulated potassium-efflux system protein, putative
YP_001371579.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bmf:BAB2_0205 modulator of DNA gyrase
YP_001371580.1	PFAM: inositol monophosphatase; KEGG: bme:BMEII1032 myo-inositol-1(or 4)-monophosphatase
YP_001371581.1	KEGG: bmb:BruAb2_0209 hypothetical protein
YP_001371582.1	PFAM: protein of unknown function DUF374; KEGG: bmb:BruAb2_0210 hypothetical protein
YP_001371583.1	catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A
YP_001371584.1	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate
YP_001371585.1	KEGG: bmb:BruAb2_0213 hypothetical protein
YP_001371586.1	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
YP_001371587.1	PFAM: peptidase S58 DmpA; KEGG: bms:BRA0349 hypothetical protein
YP_001371588.1	PFAM: Chloride channel core; KEGG: bme:BMEII0897 chloride channel protein
YP_001371589.1	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate
YP_001371590.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmb:BruAb2_0828 transcriptional regulator OxyR
YP_001371591.1	PFAM: Catalase domain protein; KEGG: bmb:BruAb2_0827 KatA, catalase
YP_001371592.1	PFAM: Fmu (Sun) domain protein; KEGG: bms:BRA0358 sun protein, putative
YP_001371593.1	PFAM: thioesterase superfamily protein; KEGG: bmb:BruAb2_0823 hypothetical protein
YP_001371594.1	Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine
YP_001371595.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_001371596.1	KEGG: ret:RHE_PF00032 hypothetical protein
YP_001371597.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rle:pRL120389 putative GFO/IDH/MocA family oxidoreductase
YP_001371598.1	PFAM: inner-membrane translocator; KEGG: sme:SMb20352 probable sugar ABC transporter permease protein
YP_001371599.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PF00035 probable ribose ABC transporter, ATP-binding protein
YP_001371600.1	KEGG: sme:SMb20350 hypothetical protein
YP_001371601.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20349 probable ABC transporter sugar-binding protein
YP_001371602.1	KEGG: rle:pRL120394 hypothetical protein
YP_001371603.1	PFAM: type III effector Hrp-dependent outers; KEGG: ret:RHE_PF00041 hypothetical protein
YP_001371604.1	PFAM: ribulose bisphosphate carboxylase large chain; KEGG: ret:RHE_PF00042 ribulose bisphosphate carboxylaseoxygenase, large subunit protein
YP_001371605.1	Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization
YP_001371606.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN0751 transport protein, MFS superfamily
YP_001371607.1	PFAM: protein of unknown function DUF336; KEGG: pfl:PFL_3600 GlcG protein
YP_001371608.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2044 transcriptional regulator, LysR family
YP_001371609.1	KEGG: sme:SMb20504 putative ABC transporter periplasmic sugar-binding protein
YP_001371610.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PB00077 probable sugar ABC transporter, ATP-binding protein
YP_001371611.1	PFAM: inner-membrane translocator; KEGG: ret:RHE_PB00076 probable sugar ABC transporter, permease protein
YP_001371612.1	PFAM: putative sugar-binding domain protein; KEGG: ret:RHE_PB00075 putative transcriptional regulator protein, CRP family
YP_001371613.1	PFAM: aldo/keto reductase; KEGG: ret:RHE_PB00074 probable aldoketo reductase protein
YP_001371614.1	PFAM: FAD dependent oxidoreductase; KEGG: ret:RHE_PB00073 probable glycerol-3-phosphate dehydrogenase protein
YP_001371615.1	PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ret:RHE_PB00072 putative aldolase protein
YP_001371616.1	PFAM: carbohydrate kinase FGGY; KEGG: ret:RHE_PB00071 L-xylulose kinase protein
YP_001371617.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mlo:mll4091 fatty acid synthase, cyclopropane-fatty-acyl-phospholipid synthase
YP_001371620.1	KEGG: mlo:mll2032 hypothetical protein
YP_001371621.1	PFAM: peptidase T2 asparaginase 2; KEGG: aav:Aave_1656 peptidase T2, asparaginase 2
YP_001371622.1	TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; KEGG: tbd:Tbd_0887 peptidase S33, proline iminopeptidase 1
YP_001371623.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: rxy:Rxyl_0312 peptidase S9, prolyl oligopeptidase active site region
YP_001371624.1	TIGRFAM: amidohydrolase; KEGG: bja:blr1352 aminobenzoyl-glutamate utilization protein
YP_001371625.1	PFAM: extracellular solute-binding protein family 5; KEGG: bqu:BQ09580 ABC transporter, periplasmic oligopeptide-binding protein
YP_001371626.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbk:BARBAKC583_1029 dipeptide ABC transporter, permease protein
YP_001371627.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhe:BH12160 ABC transporter, permease protein
YP_001371628.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bhe:BH12150 oligopeptide transport ATP-binding protein
YP_001371629.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bhe:BH12140 ABC transporter, ATP-binding protein
YP_001371630.1	PFAM: beta-lactamase; KEGG: sus:Acid_2378 beta-lactamase
YP_001371631.1	PFAM: MmgE/PrpD family protein; KEGG: rle:pRL110483 putative MmgE/PrpD family protein
YP_001371632.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: atc:AGR_C_4564 hypothetical protein
YP_001371633.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMb20773 putative transcriptional regulator, GntR family protein
YP_001371634.1	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate)
YP_001371635.1	PFAM: Uncharacterized protein UPF0065; KEGG: sme:SMb20771 hypothetical protein
YP_001371636.1	KEGG: sme:SMb20770 hypothetical protein
YP_001371637.1	PFAM: protein of unknown function DUF112 transmembrane; KEGG: sme:SMb20769 hypothetical protein
YP_001371638.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMb20768 hypothetical protein
YP_001371639.1	in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone
YP_001371640.1	KEGG: mes:Meso_3252 hypothetical protein
YP_001371641.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_001371642.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_001371643.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bmb:BruAb2_0775 acyl-CoA dehydrogenase
YP_001371644.1	TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: bms:BRA0448 acetyl-CoA acetyltransferase
YP_001371645.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bms:BRA0449 3-hydroxyacyl-CoA dehydrogenase, putative
YP_001371646.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bms:BRA0450 acetyl-CoA synthetase, putative
YP_001371647.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bms:BRA0451 transcriptional regulator, AraC family
YP_001371648.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: atc:AGR_L_1674 probable MFS dicarboxylate transporter
YP_001371649.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sal:Sala_1457 periplasmic sensor signal transduction histidine kinase
YP_001371650.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sal:Sala_1458 two component, sigma54 specific, transcriptional regulator, fis family
YP_001371651.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bmb:BruAb2_0899 NnrR, transcriptional regulator
YP_001371652.1	PFAM: peptidase U32; KEGG: bmb:BruAb2_0892 hypothetical protease
YP_001371653.1	PFAM: peptidase U32; KEGG: bmb:BruAb2_0891 peptidase, U32 family
YP_001371654.1	KEGG: bms:BRA0291 hypothetical protein
YP_001371655.1	TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: bms:BRA0292 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
YP_001371656.1	catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate
YP_001371657.1	PFAM: creatinase; peptidase M24; KEGG: bms:BR1062 proline dipeptidase
YP_001371659.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: mlo:mlr7253 hypothetical protein
YP_001371660.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_001371661.1	PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: mlo:mll7250 hypothetical protein
YP_001371662.1	catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway
YP_001371663.1	PFAM: extracellular solute-binding protein family 5; KEGG: mlo:mll7247 ABC transporter substrate binding protein
YP_001371664.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll7246 ABC transporter permease protein
YP_001371665.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll7245 ABC transporter permease protein
YP_001371666.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: mlo:mll7244 ABC transporter ATP-binding protein
YP_001371667.1	PFAM: beta-lactamase; KEGG: mlo:mll7242 probable esterase
YP_001371668.1	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling
YP_001371669.1	KEGG: atc:AGR_L_2662 hypothetical protein
YP_001371670.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: atc:AGR_L_2664 hypothetical protein
YP_001371671.1	TIGRFAM: methyltransferase FkbM family; KEGG: atc:AGR_L_2665 hypothetical protein
YP_001371672.1	PFAM: Resolvase domain; Recombinase; KEGG: pde:Pden_3123 recombinase
YP_001371673.1	KEGG: pde:Pden_3124 hypothetical protein
YP_001371674.1	PFAM: Protein of unknown function DUF1778; KEGG: rru:Rru_A1648 helix-turn-helix protein, CopG
YP_001371675.1	PFAM: GCN5-related N-acetyltransferase; KEGG: eba:ebA5964 GCN5-related N-acetyltransferase
YP_001371676.1	KEGG: jan:Jann_0240 nuclease (SNase-like)
YP_001371677.1	KEGG: eli:ELI_07890 predicted ATP-dependent endonuclease, OLD family protein
YP_001371678.1	PFAM: metallophosphoesterase; KEGG: nwi:Nwi_0908 exonuclease SbcD
YP_001371679.1	KEGG: rfr:Rfer_3042 putative GTP-binding protein
YP_001371680.1	KEGG: mgm:Mmc1_1351 hypothetical protein
YP_001371681.1	PFAM: protein of unknown function DUF159; KEGG: mlo:mll7390 hypothetical protein
YP_001371682.1	KEGG: mes:Meso_3807 hypothetical protein
YP_001371683.1	KEGG: mes:Meso_3808 hypothetical protein
YP_001371684.1	KEGG: mes:Meso_3809 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein
YP_001371686.1	PFAM: domain of unknown function DUF1738; KEGG: pde:Pden_1544 domain of unknown function DUF1738
YP_001371687.1	KEGG: pde:Pden_1543 hypothetical protein
YP_001371688.1	KEGG: nwi:Nwi_2123 hypothetical protein
YP_001371689.1	KEGG: mes:Meso_3820 hypothetical protein
YP_001371690.1	KEGG: rle:pRL70010 hypothetical protein
YP_001371691.1	KEGG: pde:Pden_1539 hypothetical protein
YP_001371692.1	KEGG: pde:Pden_1538 hypothetical protein
YP_001371693.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: sal:Sala_2509 transcriptional regulator, MerR family
YP_001371694.1	PFAM: Mercuric transport protein MerT; KEGG: sal:Sala_2510 mercuric transport protein MerT
YP_001371695.1	PFAM: Heavy metal transport/detoxification protein; KEGG: sal:Sala_2511 mercuric transport protein periplasmic component
YP_001371697.1	TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; alkylmercury lyase; KEGG: sal:Sala_2512 mercuric reductase MerA
YP_001371698.1	KEGG: mes:Meso_4141 hypothetical protein
YP_001371699.1	KEGG: mes:Meso_4142 hypothetical protein
YP_001371700.1	KEGG: mes:Meso_4143 hypothetical protein
YP_001371701.1	PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: mes:Meso_4144 phage integrase-like SAM-like
YP_001371702.1	KEGG: sal:Sala_2657 hypothetical protein
YP_001371703.1	KEGG: sal:Sala_2656 hypothetical protein
YP_001371704.1	PFAM: nuclease (SNase domain protein); KEGG: nha:Nham_3090 nuclease (SNase-like)
YP_001371705.1	KEGG: pde:Pden_1537 hypothetical protein
YP_001371706.1	KEGG: pde:Pden_1536 hypothetical protein
YP_001371707.1	KEGG: pde:Pden_1535 hypothetical protein
YP_001371708.1	PFAM: PilT protein domain protein; KEGG: rle:RL3054 hypothetical protein
YP_001371709.1	TIGRFAM: prevent-host-death family protein; KEGG: rle:RL3053 hypothetical protein
YP_001371710.1	PFAM: Antirestriction protein; KEGG: mes:Meso_4600 antirestriction protein
YP_001371711.1	KEGG: mes:Meso_3828 probably methylase/helicase
YP_001371712.1	KEGG: nwi:Nwi_2129 hypothetical protein
YP_001371713.1	KEGG: nwi:Nwi_2130 hypothetical protein
YP_001371714.1	KEGG: mes:Meso_3831 hypothetical protein
YP_001371715.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: nha:Nham_4669 single-strand binding protein
YP_001371716.1	KEGG: mes:Meso_0528 transcriptional regulator, XRE family
YP_001371717.1	KEGG: mes:Meso_0527 hypothetical protein
YP_001371718.1	KEGG: pde:Pden_3173 hypothetical protein
YP_001371719.1	KEGG: pde:Pden_1514 hypothetical protein
YP_001371720.1	KEGG: mes:Meso_3841 putative transcriptional regulator
YP_001371721.1	KEGG: pde:Pden_1512 replication protein A
YP_001371722.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mes:Meso_2336 cobyrinic acid a,c-diamide synthase
YP_001371723.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mes:Meso_3844 DNA methylase N-4/N-6
YP_001371724.1	KEGG: bja:bsl0049 hypothetical protein
YP_001371725.1	KEGG: pde:Pden_1511 hypothetical protein
YP_001371726.1	KEGG: pde:Pden_1510 conjugal transfer protein precursor
YP_001371727.1	PFAM: protein of unknown function DUF736; KEGG: pde:Pden_1509 protein of unknown function DUF736
YP_001371728.1	PFAM: Lytic transglycosylase catalytic; KEGG: pde:Pden_1508 lytic transglycosylase, catalytic
YP_001371729.1	KEGG: pde:Pden_1507 hypothetical protein
YP_001371730.1	type IV secretion VirD4 coupling protein family
YP_001371731.1	KEGG: pde:Pden_1505 hypothetical protein
YP_001371733.1	PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_2732 major facilitator superfamily (MFS) transporter
YP_001371734.1	TIGRFAM: Arsenate resistance ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: nwi:Nwi_3127 NADPH-dependent FMN reductase
YP_001371735.1	TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: pde:Pden_0214 arsenical-resistance protein
YP_001371736.1	TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: nwi:Nwi_3125 arsenate reductase
YP_001371737.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: nwi:Nwi_3124 low molecular weight phosphotyrosine protein phosphatase
YP_001371738.1	SMART: regulatory protein ArsR; KEGG: nwi:Nwi_3123 transcriptional regulatory protein, ArsR family
YP_001371739.1	KEGG: rle:RL2883 hypothetical protein
YP_001371740.1	TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: eli:ELI_04470 putative lipoprotein signal peptidase
YP_001371741.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: net:Neut_0054 cytochrome c biogenesis protein, transmembrane region
YP_001371742.1	PFAM: electron transport protein SCO1/SenC; KEGG: mes:Meso_4131 electron transport protein SCO1/SenC
YP_001371743.1	PFAM: protein of unknown function DUF461; KEGG: mes:Meso_4130 protein of unknown function DUF461
YP_001371744.1	KEGG: mes:Meso_4214 Co/Zn/Cd efflux system component
YP_001371745.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: nwi:Nwi_3134 heavy metal translocating P-type ATPase
YP_001371746.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: net:Neut_0085 transcriptional regulator, MerR family protein
YP_001371747.1	PFAM: Bile acid:sodium symporter; KEGG: maq:Maqu_1406 bile acid:sodium symporter
YP_001371748.1	PFAM: regulatory protein ArsR; KEGG: rpd:RPD_3639 regulatory protein, ArsR
YP_001371749.1	TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: pde:Pden_0156 type II secretion system protein E
YP_001371750.1	PFAM: Conjugal transfer protein TrbC; KEGG: pde:Pden_1483 conjugal transfer protein TrbC
YP_001371751.1	KEGG: pde:Pden_1482 conjugal transfer protein TrbB
YP_001371752.1	type IV secretion system VirB4 family
YP_001371753.1	TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: pde:Pden_1480 conjugal transfer protein TrbJ
YP_001371754.1	KEGG: pde:Pden_1479 hypothetical protein
YP_001371755.1	type IV secretion VirB6 family
YP_001371756.1	PFAM: Conjugal transfer protein; KEGG: mes:Meso_0502 conjugal transfer protein
YP_001371757.1	TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: pde:Pden_1476 conjugal transfer protein TrbG/VirB9/CagX
YP_001371758.1	PFAM: conjugation TrbI family protein; KEGG: pde:Pden_1475 conjugation TrbI family protein
YP_001371759.1	KEGG: gbe:GbCGDNIH1_1065 hypothetical protein
YP_001371760.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pde:Pden_3205 transcriptional regulator, LysR family
YP_001371762.1	PFAM: regulatory protein ArsR; KEGG: xcv:XCV2337 transcriptional regulator, ArsR family
YP_001371763.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: ajs:Ajs_1370 cation diffusion facilitator family transporter
YP_001371764.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV3887 transmembrane efflux protein
YP_001371765.1	PFAM: Heavy metal transport/detoxification protein; KEGG: pau:PA14_18800 putative heavy metal binding protein
YP_001371766.1	KEGG: rsp:RSP_2259 transmembrane protein
YP_001371767.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: cytochrome d1 heme region; protein of unknown function DUF305; KEGG: net:Neut_0066 40-residue YVTN family beta-propeller repeat protein
YP_001371769.1	PFAM: protein of unknown function DUF411; KEGG: nwi:Nwi_3132 protein of unknown function DUF411
YP_001371770.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein; KEGG: sal:Sala_2544 heavy metal translocating P-type ATPase
YP_001371771.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: ppu:PP_0026 cobalt/cadmium/zinc transporter, CDF family
YP_001371772.1	PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: mes:Meso_3882 twin-arginine translocation pathway signal
YP_001371773.1	KEGG: rsp:RSP_3264 probable C-type cytochrome
YP_001371774.1	TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bbr:BB3013 MerR-family transcriptional regulator
YP_001371775.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: atc:AGR_C_2205 hypothetical protein
YP_001371776.1	PFAM: glutaredoxin; glutaredoxin 2; KEGG: dge:Dgeo_2583 glutaredoxin
YP_001371777.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mes:Meso_3893 heavy metal translocating P-type ATPase
YP_001371778.1	PFAM: Heavy metal transport/detoxification protein; KEGG: pau:PA14_18800 putative heavy metal binding protein
YP_001371779.1	PFAM: protein of unknown function DUF305; KEGG: mes:Meso_3895 protein of unknown function DUF305
YP_001371780.1	PFAM: protein of unknown function DUF156; KEGG: hne:HNE_1709 hypothetical protein
YP_001371781.1	KEGG: hne:HNE_1381 hypothetical protein
YP_001371782.1	PFAM: protein of unknown function DUF305; KEGG: mes:Meso_3896 protein of unknown function DUF305
YP_001371783.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ttj:TTHA0840 probable thiol:disulfide interchange protein
YP_001371784.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: rpb:RPB_4360 thiol:disulfide interchange protein
YP_001371785.1	PFAM: DSBA oxidoreductase; KEGG: rpd:RPD_4245 DsbA oxidoreductase
YP_001371786.1	KEGG: rpb:RPB_4360 thiol:disulfide interchange protein
YP_001371787.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: atc:AGR_L_2979 hypothetical protein
YP_001371788.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpd:RPD_4242 ATP-binding region, ATPase-like
YP_001371789.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_4906 two component transcriptional regulator, winged helix family
YP_001371791.1	KEGG: ret:RHE_PF00456 L-lysine 6-monooxygenase (lysine N(6)-hydroxylase) protein
YP_001371792.1	PFAM: IucA/IucC family protein; KEGG: gbe:GbCGDNIH1_2376 aerobactin siderophore biosynthesis protein IucC
YP_001371793.1	KEGG: gbe:GbCGDNIH1_2377 N(6)-hydroxylysine O-acetyltransferase
YP_001371794.1	PFAM: IucA/IucC family protein; KEGG: gbe:GbCGDNIH1_2378 aerobactin siderophore biosynthesis protein IucA
YP_001371795.1	PFAM: major facilitator superfamily MFS_1; KEGG: gbe:GbCGDNIH1_2379 transporter, MFS superfamily
YP_001371796.1	TIGRFAM: Siderophore transporter RhtX/FptX family; PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMa2337 putative transmembrane transport protein
YP_001371797.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: noc:Noc_1820 TonB-dependent receptor
YP_001371798.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMa2412 RhrA transcriptional activator
YP_001371799.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sme:SMa0257 probable methylamine
YP_001371800.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03133 putative amino-acid transport system permease ABC transporter protein
YP_001371801.1	PFAM: FAD dependent oxidoreductase; KEGG: sme:SMc03132 putative oxidoreductase protein
YP_001371802.1	PFAM: extracellular solute-binding protein family 3; KEGG: sme:SMc03131 putative amino acid-binding periplasmic ABC transporter protein
YP_001371803.1	PFAM: Endoribonuclease L-PSP; KEGG: pen:PSEEN2383 endoribonuclease, L-PSP family
YP_001371804.1	PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1252 major facilitator superfamily (MFS) multidrug efflux pump
YP_001371805.1	PFAM: helix-turn-helix domain protein; KEGG: sme:SMc02184 hypothetical transcription regulator protein
YP_001371807.1	KEGG: bhe:BH06670 filamentous hemagglutinin
YP_001371809.1	KEGG: reh:H16_B0247 filamentous hemagglutinin / adhesin
YP_001371810.1	KEGG: sma:SAV7559 hypothetical protein
YP_001371811.1	KEGG: plu:plu1148 hypothetical protein
YP_001371813.1	KEGG: mes:Meso_1882 hypothetical protein
YP_001371814.1	PFAM: Resolvase domain; KEGG: atc:AGR_L_1981 hypothetical protein
YP_001371818.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bms:BRA0894 hypothetical protein
YP_001371819.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bms:BRA0893 thioredoxin
YP_001371820.1	PFAM: peptidase S16 lon domain protein; KEGG: bmb:BruAb2_0340 hypothetical ATP-dependent protease La
YP_001371821.1	PFAM: protein of unknown function DUF343; KEGG: bmb:BruAb2_0341 hypothetical protein
YP_001371822.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_001371823.1	TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bme:BMEII0405 ADA regulatory protein / O-6-methylguanine-DNA-alkyltransferase
YP_001371824.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bms:BRA0888 major facilitator family transporter
YP_001371825.1	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde
YP_001371826.1	PFAM: regulatory protein MarR; transcriptional regulator PadR family protein; KEGG: bmb:BruAb2_0346 transcriptional regulator, MarR family
YP_001371827.1	PFAM: OsmC family protein; KEGG: bmb:BruAb2_0347 Ohr, organic hydroperoxide resistance protein
YP_001371828.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pca:Pcar_1335 maturase-related protein
YP_001371829.1	PFAM: dihydrodipicolinate synthetase; KEGG: mlo:mll6376 dihydrodipicolinate synthetase
YP_001371830.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mlo:mll6377 threonine efflux protein
YP_001371831.1	PFAM: protein of unknown function DUF1025; KEGG: bmb:BruAb2_0348 hypothetical protein
YP_001371832.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
YP_001371833.1	KEGG: rle:RL1488 hypothetical protein
YP_001371834.1	PFAM: HpcH/HpaI aldolase; KEGG: bme:BMEII0413 citrate lyase beta chain / citryl-CoA lyase subunit
YP_001371835.1	KEGG: bmb:BruAb2_0352 hypothetical protein
YP_001371836.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bmb:BruAb2_0353 glyoxalase family protein
YP_001371837.1	PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: bmb:BruAb2_0354 Dcp, peptidyl-dipeptidase Dcp
YP_001371838.1	TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: bmb:BruAb2_0356 MtgE, magnesium transporter
YP_001371839.1	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: bmb:BruAb2_0357 GTP-binding protein TypA
YP_001371840.1	KEGG: bja:blr3114 hypothetical protein
YP_001371841.1	PFAM: inner-membrane translocator; KEGG: sme:SMa2369 putative ABC transporter, permease
YP_001371842.1	PFAM: inner-membrane translocator; KEGG: rle:pRL90206 putative permease component of ABC transporter
YP_001371843.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL90205 putative ATP-binding component of ABC transporter
YP_001371844.1	PFAM: Amidase; KEGG: rle:pRL90204 putative amidase
YP_001371845.1	PFAM: basic membrane lipoprotein; KEGG: sme:SMa2361 hypothetical protein
YP_001371846.1	Catalyzes the deamination of cytosine to uracil and ammonia
YP_001371847.1	PFAM: protein of unknown function UPF0029; KEGG: bms:BRA0874 conserved hypothetical protein TIGR00257
YP_001371848.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: atc:AGR_L_3214 hypothetical protein
YP_001371849.1	TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rpb:RPB_3086 peptidase M20D, amidohydrolase
YP_001371850.1	KEGG: zmo:ZMO0313 L-2-amino-thiazoline-4-carboxylic acid hydrolase
YP_001371851.1	PFAM: FAD dependent oxidoreductase; KEGG: rpa:RPA2638 possible oxidoreductase
YP_001371852.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rru:Rru_A2011 ABC transporter component
YP_001371853.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A2012 binding-protein-dependent transport systems inner membrane component
YP_001371854.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A2013 binding-protein-dependent transport systems inner membrane component
YP_001371855.1	PFAM: extracellular solute-binding protein family 5; KEGG: rpa:RPA2641 putative ABC transporter oligopeptide-binding protein
YP_001371856.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpb:RPB_0330 short-chain dehydrogenase/reductase SDR
YP_001371857.1	KEGG: rpb:RPB_1036 hypothetical protein
YP_001371858.1	PFAM: sulfatase; KEGG: ret:RHE_PE00324 choline sulfatase protein
YP_001371859.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: atc:AGR_L_470 hypothetical protein
YP_001371860.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:pRL110430 putative LysR family transcriptional regulator
YP_001371861.1	PFAM: Uncharacterized protein UPF0114; KEGG: atc:AGR_C_4155 hypothetical protein
YP_001371862.1	PFAM: dienelactone hydrolase; BAAT/Acyl-CoA thioester hydrolase; KEGG: rle:pRL110484 putative dienelactone hydrolase family protein
YP_001371863.1	PFAM: protein of unknown function DUF808; KEGG: bms:BRA0455 hypothetical protein
YP_001371864.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMb21202 hypothetical protein
YP_001371865.1	PFAM: phospholipase/Carboxylesterase; KEGG: sme:SMb21203 putative esteraselipase/thioesterase protein
YP_001371866.1	PFAM: regulatory protein ArsR; KEGG: bmb:BruAb2_0766 transcriptional regulator, ArsR family
YP_001371867.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bmb:BruAb2_0765 hypothetical protein
YP_001371868.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bmb:BruAb2_0764 hypothetical protein
YP_001371869.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_3190 ABC transporter (ATP-binding protein)
YP_001371870.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: oih:OB2847 transcriptional regulator
YP_001371871.1	PFAM: dihydrodipicolinate synthetase; KEGG: rle:pRL120776 putative dihydropicolinate synthase
YP_001371872.1	KEGG: bms:BRA0810 ABC transporter, periplasmic substrate-binding protein
YP_001371873.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bmf:BAB2_0428 ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase
YP_001371874.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0424 ABC transporter, membrane spanning protein
YP_001371875.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0807 ABC transporter, permease protein
YP_001371876.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bps:BPSS2072 mandelate racemase / muconate lactonizing enzyme
YP_001371877.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: sme:SMc04142 hypothetical protein
YP_001371878.1	catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate
YP_001371879.1	PFAM: Dimethylmenaquinone methyltransferase; KEGG: mes:Meso_4463 hypothetical protein
YP_001371880.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: atc:AGR_C_5109 ribose ABC transporter, periplasmic D-ribose-binding protein VCA0130
YP_001371881.1	PFAM: inner-membrane translocator; KEGG: atc:AGR_C_5111 sugar ABC transporter (permease)
YP_001371882.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_5112 ABC transporter protein, ATP binding component
YP_001371883.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rle:RL1317 putative transmembrane protein
YP_001371884.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mes:Meso_3605 diguanylate cyclase/phosphodiesterase
YP_001371885.1	KEGG: bur:Bcep18194_B2775 hypothetical protein
YP_001371886.1	PFAM: Domain of unknown function DUF1801; KEGG: rle:RL2763 hypothetical protein
YP_001371887.1	PFAM: Domain of unknown function DUF1801; KEGG: bja:blr6753 hypothetical protein
YP_001371888.1	PFAM: Amidohydrolase 3; KEGG: rme:Rmet_0005 twin-arginine translocation pathway signal
YP_001371889.1	KEGG: bam:Bamb_5237 protein of unknown function DUF1330
YP_001371890.1	KEGG: rpd:RPD_1715 hypothetical protein
YP_001371891.1	PFAM: helix-turn-helix domain protein; KEGG: bxe:Bxe_B0860 transcriptional regulator, XRE family
YP_001371892.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bmb:BruAb1_0734 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001371893.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_C0873 transcriptional regulator, LysR family
YP_001371894.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pat:Patl_0774 protein of unknown function DUF6, transmembrane
YP_001371895.1	PFAM: regulatory protein TetR; KEGG: pol:Bpro_2654 transcriptional regulator, TetR family
YP_001371896.1	PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: bms:BRA0311 transporter, putative
YP_001371897.1	PFAM: LytTr DNA-binding region; KEGG: ilo:IL2535 intracellular signaling protein (GAF,GGDEF domains)
YP_001371898.1	PFAM: Endoribonuclease L-PSP; KEGG: dsy:DSY2002 hypothetical protein
YP_001371899.1	this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress
YP_001371900.1	PFAM: TOBE domain protein; KEGG: rpb:RPB_0855 molybdenum-pterin binding protein
YP_001371901.1	PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_1525 major facilitator family transporter
YP_001371902.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bms:BRA0414 transcriptional regulator, Crp/Fnr family
YP_001371903.1	PFAM: regulatory protein LuxR; KEGG: bmb:BruAb2_0786 transcriptional regulator, LuxR family
YP_001371904.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: bme:BMEII0852 succinoglycan biosynthesis transport protein ExoP
YP_001371905.1	PFAM: polysaccharide export protein; KEGG: bms:BRA0417 exopolysaccharide biosynthesis protein Bme11
YP_001371906.1	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: bms:BRA0418 fucose synthetase family protein
YP_001371907.1	TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: bms:BRA0419 GDP-mannose 4,6-dehydratase Bme9
YP_001371908.1	PFAM: glycosyl transferase group 1; KEGG: bme:BMEII0847 glycosyl transferase
YP_001371909.1	PFAM: glycosyl transferase group 1; KEGG: bms:BRA0421 glycosyl transferase, group 1 family protein
YP_001371910.1	PFAM: glycosyl transferase group 1; KEGG: bms:BRA0422 glycosyl transferase, group 1 family protein
YP_001371911.1	KEGG: bms:BRA0424 acetyltransferase, CysE/LacA/LpxA/NodL family
YP_001371912.1	KEGG: bme:BMEII0842 hypothetical protein
YP_001371913.1	PFAM: protein of unknown function DUF218; KEGG: bms:BRA0426 Bme2 protein
YP_001371914.1	KEGG: bms:BRA0427 glycosyl transferase, group 2 family protein
YP_001371915.1	PFAM: glycosyl transferase family 4; KEGG: bms:BRA0428 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase, putative
YP_001371916.1	PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: bms:BRA0429 polysaccharide biosynthesis protein
YP_001371917.1	PFAM: glycosyl transferase family 2; KEGG: atc:AGR_L_153 hypothetical protein
YP_001371918.1	PFAM: polysaccharide pyruvyl transferase; KEGG: bms:BRA0431 hypothetical protein
YP_001371919.1	PFAM: glycosyl transferase group 1; KEGG: bms:BRA0432 glycosyl transferase, group 1 family protein
YP_001371920.1	catalyzes the formation of 5-aminovulinate from (S)-4-amino-5-oxopentanoate
YP_001371921.1	KEGG: bme:BMEII0833 hypothetical protein
YP_001371922.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bms:BRA0435 epimerase/dehydratase family protein, putative
YP_001371923.1	KEGG: bms:BRA0436 hypothetical protein
YP_001371924.1	TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: bms:BRA0437 dTDP-4-dehydrorhamnose 3,5-epimerase
YP_001371925.1	PFAM: Methyltransferase type 12; Methyltransferase domain protein; C-methyltransferase; KEGG: bms:BRA0438 methyltransferase, putative
YP_001371926.1	PFAM: Nucleotidyl transferase; KEGG: bms:BRA0439 nucleotidyltransferase family protein
YP_001371927.1	PFAM: LmbE family protein; KEGG: bme:BMEII0826 hypothetical cytosolic protein
YP_001371928.1	PFAM: secretion protein HlyD family protein; KEGG: bmb:BruAb2_0750 HlyD family secretion protein
YP_001371929.1	PFAM: major facilitator superfamily MFS_1; KEGG: bms:BRA0471 transporter, putative
YP_001371930.1	PFAM: regulatory protein MarR; KEGG: bmb:BruAb2_0752 transcriptional regulator, MarR family
YP_001371931.1	PFAM: Secreted repeat of unknown function; KEGG: ret:RHE_CH02778 hypothetical protein
YP_001371932.1	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ret:RHE_CH02779 RNA polymerase sigma factor protein (sigma-24)
YP_001371933.1	KEGG: rle:RL3236 putative transmembrane protein
YP_001371934.1	PFAM: Asparaginase/glutaminase; KEGG: atc:AGR_L_2084 L-asparaginase
YP_001371935.1	PFAM: amino acid permease-associated region; KEGG: atc:AGR_L_2082 L-asparagine permease
YP_001371936.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: atc:AGR_L_2076 hypothetical protein
YP_001371938.1	PFAM: major facilitator superfamily MFS_1; KEGG: bms:BRA0444 major facilitator family transporter
YP_001371939.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmb:BruAb2_0777 transcriptional regulator, LysR family
YP_001371940.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: atc:AGR_L_3333 hypothetical protein
YP_001371941.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bme:BMEI1392 ribose transport ATP-binding protein RbsA
YP_001371942.1	PFAM: inner-membrane translocator; KEGG: bms:BR0543 ribose ABC transporter, permease protein
YP_001371943.1	KEGG: bms:BR0544 ribose ABC transporter, periplasmic D-ribose-binding protein
YP_001371944.1	PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: bms:BR0545 hypothetical protein
YP_001371945.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bms:BR0546 oxidoreductase, Gfo/Idh/MocA family
YP_001371946.1	catalyzes the interconversion of D-xylose to D-xylulose
YP_001371947.1	TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: bms:BR0548 xylulokinase
YP_001371948.1	PFAM: regulatory protein LacI; KEGG: bms:BR0549 transcriptional regulator, LacI family
YP_001371949.1	TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bmb:BruAb2_1087 XylF, D-xylose ABC transporter, periplasmic D-xylose-binding protein
YP_001371950.1	with XylFH is part of the high affinity xylose ABC transporter
YP_001371951.1	PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_1089 XylH, D-xylose ABC transporter, permease protein
YP_001371952.1	KEGG: sme:SMc02590 hypothetical protein
YP_001371953.1	KEGG: sme:SMc02591 hypothetical protein
YP_001371954.1	KEGG: sme:SMc02592 hypothetical protein
YP_001371955.1	KEGG: sme:SMc02593 hypothetical protein
YP_001371956.1	PFAM: protein of unknown function DUF112 transmembrane; KEGG: rle:RL3889 putative transmembrane protein
YP_001371957.1	PFAM: protein of unknown function DUF1468; KEGG: sme:SMb20026 hypothetical protein
YP_001371958.1	PFAM: Uncharacterized protein UPF0065; KEGG: sme:SMb20025 hypothetical protein
YP_001371959.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS05312 probable transcription regulator protein
YP_001371960.1	PFAM: protein of unknown function DUF81; KEGG: atc:AGR_C_4214 hypothetical protein PA0278
YP_001371961.1	PFAM: CBS domain containing protein; HPP family protein?; KEGG: rle:pRL120639 putative transmembrane protein
YP_001371962.1	PFAM: protein of unknown function UPF0118; KEGG: bms:BRA0460 hypothetical protein
YP_001371963.1	KEGG: ter:Tery_3237 hypothetical protein
YP_001371964.1	PFAM: glycosyl transferase group 1; KEGG: sme:SMb21308 putative glycosyltransferase, forming alpha glycosyl linkages protein
YP_001371965.1	KEGG: sme:SMb21309 hypothetical protein
YP_001371966.1	KEGG: sme:SMb21310 putative membrane-anchored protein
YP_001371967.1	PFAM: glycosyl transferase group 1; KEGG: sme:SMb21311 putative glycosyltransferase, forming alpha-gylcosyl linkages protein
YP_001371968.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMb21312 putative methyltransferase protein
YP_001371969.1	PFAM: glycosyl transferase family 2; KEGG: sme:SMb21313 putative bifunctional glycosyltransferase, forming alpha-glycosyl and beta-glycosyl linkages protein
YP_001371970.1	PFAM: Hemolysin-type calcium-binding region; KEGG: sme:SMb21314 putative secreted calcium-binding protein
YP_001371971.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: sme:SMb21315 putative protein secretion protein, HlyD family membrane fusion protein, secretes ExpE1
YP_001371972.1	TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21316 putative ABC transporter protein, fused ATP-binding and membrane-spanning components, secretes ExpE1
YP_001371973.1	PFAM: regulatory protein MarR; KEGG: sme:SMb21317 transcriptional activator of exopolysaccharide II synthesis, MarR family protein
YP_001371974.1	PFAM: glycosyl transferase group 1; KEGG: sme:SMb21318 putative glycosyltransferase, forming alpha-glycosyl linkages protein
YP_001371975.1	KEGG: sme:SMb21319 putative membrane-anchored protein
YP_001371976.1	PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: sme:SMb21320 putative bifunctional glycosyltransferase, forming beta-glycosyl and alpha-glycosyl linkages protein
YP_001371977.1	PFAM: polysaccharide pyruvyl transferase; KEGG: sme:SMb21321 putative membrane-anchored protein
YP_001371978.1	PFAM: polysaccharide pyruvyl transferase; KEGG: sme:SMb21322 putative membrane-anchored protein
YP_001371979.1	KEGG: sme:SMb21323 putative protein, probably exported to periplasma
YP_001371981.1	TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: mlo:mlr1664 penicillin binding protein
YP_001371982.1	PFAM: alpha-2-macroglobulin domain protein; N/apple PAN domain protein; alpha-2-macroglobulin domain protein 2; KEGG: mlo:mlr1663 hypothetical protein
YP_001371983.1	member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria
YP_001371984.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL3780 putative LysR family transcriptional regulator
YP_001371985.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH00949 probable acetyltransferase protein
YP_001371986.1	TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Pertactin; Autotransporter beta- domain protein; KEGG: atc:AGR_pAT_528 hypothetical protein
YP_001371987.1	KEGG: atc:AGR_pAT_523 hypothetical protein
YP_001371988.1	TIGRFAM: Formaldehyde dehydrogenase glutathione-independent; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: atc:AGR_C_2885 hypothetical protein
YP_001371989.1	PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_CH02461 probable sugar ABC transporter, substrate-binding protein
YP_001371990.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL2795 putative transmembrane component of ABC transporter
YP_001371991.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_2945 probable permease of ABC sugar transporter
YP_001371992.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rle:RL2793 putative ATP-binding component of ABC transporter
YP_001371993.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mlo:mll3313 hypothetical protein
YP_001371994.1	PFAM: oxidoreductase domain protein; KEGG: sme:SMc04253 putative oxidoreductase protein
YP_001371995.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: mlo:mlr3320 transcription regulator
YP_001371996.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: atc:AGR_L_244 hypothetical protein
YP_001371997.1	TIGRFAM: Ectoine/hydroxyectoine ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_257 probable amino-acid ABC transporter ATP-binding protein Y4TH
YP_001371998.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; Ectoine/hydroxyectoine ABC transporter permease protein EhuD; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_255 probable amino-acid ABC transporter permease protein Y4TG
YP_001371999.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; Ectoine/hydroxyectoine ABC transporter permease protein EhuC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_252 probable amino-acid ABC transporter permease protein Y4TF
YP_001372000.1	TIGRFAM: Ectoine/hydroxyEctoine ABC transporter solute-binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: atc:AGR_L_251 probable amino-acid ABC transporter periplasmic binding protein Y4TE precursor
YP_001372001.1	TIGRFAM: Ectoine utilization protein EutE; PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: atc:AGR_L_249 hypothetical protein
YP_001372002.1	TIGRFAM: Ectoine utilization protein EutD; PFAM: creatinase; peptidase M24; KEGG: atc:AGR_L_248 Xaa-Pro dipeptidase
YP_001372003.1	putative cyclodeaminase
YP_001372004.1	catalyzes the formation of 2-oxobutanoate from L-threonine; involved in ectoine utilization
YP_001372005.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMb20425 putative transcriptional regulator protein
YP_001372006.1	PFAM: aldehyde dehydrogenase; KEGG: rle:pRL120044 succinate-semialdehyde dehydrogenase (NADP+)
YP_001372007.1	PFAM: aminotransferase class-III; KEGG: ret:RHE_PF00202 probable adenosylmethionine--8-amino-7-oxononanoate aminotransferaseprotein
YP_001372008.1	PFAM: protein of unknown function DUF488; KEGG: bmb:BruAb2_0745 uroporphyrin-III C-methyltransferase
YP_001372009.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sme:SMc01611 putative ferrichrome-iron receptor precursor protein
YP_001372010.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMc01610 putative transcription regulator protein
YP_001372011.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_1656 ferrichrome transport ATP-binding protein FhuC
YP_001372012.1	PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_4813 glutathione S-transferase, N-terminal domain
YP_001372013.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rle:RL3426 putative C4-dicarboxylate transport two-component response regulator sigma 54 transcriptional regulatory protein
YP_001372014.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ret:RHE_CH02972 two-component sensor histidine kinase protein regulating C4-dicarboxylate transport system
YP_001372015.1	involved in the transport of C4-dicarboxylates across the membrane
YP_001372016.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bme:BMEII0786 NADH dehydrogenase
YP_001372017.1	TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: reh:H16_A3008 predicted permease
YP_001372018.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
YP_001372019.1	PFAM: regulatory protein MarR; KEGG: bmb:BruAb2_0743 transcriptional regulator, MarR family
YP_001372020.1	PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: rle:RL1304 hypothetical protein
YP_001372021.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bmb:BruAb2_0742 hypothetical glyoxalase
YP_001372022.1	PFAM: ROK family protein; KEGG: sme:SMc02880 hypothetical protein
YP_001372023.1	PFAM: CutC family protein; KEGG: rle:RL0514 putative copper homeostasis protein
YP_001372024.1	catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis
YP_001372025.1	PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2076 major facilitator superfamily (MFS_1) transporter
YP_001372026.1	PFAM: glycoside hydrolase family 25; KEGG: bms:BRA0487 glycosyl hydrolase, family 25
YP_001372027.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rxy:Rxyl_0136 transcriptional regulator, GntR family
YP_001372028.1	KEGG: rpc:RPC_3754 hypothetical protein
YP_001372029.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pha:PSHAb0542 putative transcriptional regulator, AsnC family
YP_001372031.1	PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: pfl:PFL_2360 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001372032.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_2359 amino acid ABC transporter, permease protein
YP_001372033.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_2358 amino acid ABC transporter
YP_001372034.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_2357 glutamine ABC transporter, ATP-binding protein
YP_001372035.1	PFAM: peptidase M20; KEGG: sme:SMb20697 putative peptidase, similar to arginine utilization protein RocB
YP_001372036.1	TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; KEGG: sme:SMb21532 putative phosphate acetyltransferase protein
YP_001372037.1	catalyzes the formation of acetyl phosphate and sulfite from 2-sulfoacetaldehyde; is active when grown on taurine as a sole carbon source
YP_001372038.1	PFAM: FAD dependent oxidoreductase; KEGG: sme:SMb21529 taurine dehydrogenase large subunit
YP_001372039.1	PFAM: protein of unknown function DUF1486; KEGG: rde:RD1_0829 taurine dehydrogenase small
YP_001372040.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21528 putative taurine uptake ABC transporter permease protein
YP_001372041.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21527 putative taurin uptake ABC transporter ATP-binding protein
YP_001372042.1	TIGRFAM: taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; KEGG: sme:SMb21526 putative taurine uptake ABC transporter periplasmic solute-binding protein precursor
YP_001372043.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: sme:SMb21525 putative transcriptional regulator protein
YP_001372044.1	PFAM: OmpA/MotB domain protein; KEGG: sme:SMc00141 hypothetical protein
YP_001372045.1	KEGG: bmb:BruAb2_0728 hypothetical protein
YP_001372046.1	KEGG: bmb:BruAb2_0728 hypothetical protein
YP_001372047.1	PFAM: NMT1/THI5 like domain protein; KEGG: rle:pRL120671 putative substrate-binding component of ABC transporter
YP_001372048.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_3115 ABC transporter related
YP_001372049.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0493 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit
YP_001372050.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: mlo:mll7952 two-component system, sensor protein
YP_001372051.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mlo:mll7953 two-component response regulator
YP_001372052.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_5366 GCN5-related N-acetyltransferase
YP_001372053.1	TIGRFAM: amidohydrolase; PFAM: peptidase M20; KEGG: eca:ECA4086 aminobenzoyl-glutamate utilization protein B
YP_001372054.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4082 octopine transport system permease protein
YP_001372055.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4083 octopine transport system permease protein
YP_001372056.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_6112 ABC transporter related
YP_001372057.1	PFAM: extracellular solute-binding protein family 3; KEGG: eca:ECA4085 octopine-binding periplasmic protein
YP_001372058.1	forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis
YP_001372059.1	PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bte:BTH_II1922 u1937b; B1937_F1_4
YP_001372060.1	PFAM: protein of unknown function DUF403; KEGG: mlo:mll0716 hypothetical protein
YP_001372061.1	PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: atc:AGR_C_4251 hypothetical protein
YP_001372062.1	PFAM: 20S proteasome A and B subunits; KEGG: hne:HNE_2678 peptidase, T1A (proteasome) family
YP_001372063.1	PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMc01525 putative dipeptide binding periplasmic protein
YP_001372064.1	KEGG: bmb:BruAb2_0725 hypothetical protein
YP_001372065.1	PFAM: HI0933 family protein; KEGG: bms:BRA0499 hypothetical protein
YP_001372066.1	subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+
YP_001372067.1	subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali
YP_001372068.1	subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone
YP_001372069.1	subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali
YP_001372070.1	subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport
YP_001372071.1	subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali
YP_001372072.1	KEGG: bmb:BruAb2_0716 hypothetical protein
YP_001372073.1	KEGG: bmb:BruAb2_0715 hypothetical protein
YP_001372074.1	TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family permease/ATP-binding protein CydD; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bme:BMEII0762 transport ATP-binding protein CydD
YP_001372075.1	TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA0509 ABC transporter, ATP-binding/permease protein
YP_001372076.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bmb:BruAb2_0712 CydA, cytochrome d ubiquinol oxidase, subunit I
YP_001372077.1	TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bms:BRA0511 cytochrome d ubiquinol oxidase, subunit II
YP_001372078.1	TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: bms:BRA0512 YbgT protein
YP_001372079.1	PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bmb:BruAb2_0709 transcriptional regulator, GntR family
YP_001372080.1	PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: bmb:BruAb2_0708 hypothetical protein
YP_001372081.1	PFAM: extracellular solute-binding protein family 1; KEGG: bms:BRA0516 sugar ABC transporter, periplasmic sugar-binding protein
YP_001372082.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0705 sugar ABC transporter, permease protein
YP_001372083.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0704 sugar ABC transporter, permease protein
YP_001372084.1	PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: bms:BRA0520 oxidoreductase, Gfo/Idh/MocA family
YP_001372085.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bmb:BruAb2_0702 sugar ABC transporter, ATP-binding protein
YP_001372086.1	PFAM: dehydrogenase E1 component; KEGG: bme:BMEII0748 2-oxoisovalerate dehydrogenase alpha subunit
YP_001372087.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: bms:BRA0525 2-oxoisovalerate dehydrogenase, E1 component, beta subunit
YP_001372088.1	PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: bms:BRA0526 2-oxoisovalerate dehydrogenase E2 component, dihydrolipoamide acetyltransferase
YP_001372089.1	E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_001372090.1	PFAM: Surfeit locus 1 family protein; KEGG: bms:BRA0528 SurF1 family protein
YP_001372092.1	PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: bms:BRA0530 cell division protein FtsK, putative
YP_001372093.1	PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: son:SO0821 ABC transporter, ATP-binding/permease protein
YP_001372094.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpc:RPC_1868 secretion protein HlyD
YP_001372095.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rpb:RPB_2240 RND efflux system, outer membrane lipoprotein, NodT
YP_001372096.1	PFAM: peptidase S58 DmpA; KEGG: bmb:BruAb2_0693 D-aminopeptidase, hypothetical
YP_001372097.1	PFAM: aminotransferase class IV; KEGG: bja:bll7596 D-alanine aminotransferase
YP_001372098.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa0097 putative transcriptional regulator
YP_001372099.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bms:BRA0532 major facilitator family transporter
YP_001372100.1	PFAM: carbohydrate kinase FGGY; KEGG: rle:pRL110408 putative L-xylulose kinase involved in competition for nodulation
YP_001372101.1	TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: ret:RHE_PE00285 hypothetical protein
YP_001372102.1	PFAM: inner-membrane translocator; KEGG: atu:Atu3490 ABC transporter, membrane spanning protein
YP_001372103.1	PFAM: inner-membrane translocator; KEGG: atc:AGR_L_2681 ribose ABC transporter permease protein
YP_001372104.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL110412 putative ABC transporter component involved in competition for nodulation
YP_001372105.1	TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: atc:AGR_L_2685 putative secreted solute-binding lipoprotein
YP_001372106.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: ret:RHE_PE00290 probable transcriptional regulator protein, DeoR family
YP_001372107.1	TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_PE00291 putative oxidoreductase protein, short-chain dehydrogenases/reductases (SDR) family
YP_001372108.1	TIGRFAM: L-rhamnose catabolism isomerase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ret:RHE_PE00292 putative sugar isomerase protein
YP_001372109.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: bmb:BruAb2_0689 AlkB, alkylated DNA repair protein
YP_001372110.1	catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate and L-glutamate from L-histidinol phosphate and 2-oxoglutarate
YP_001372111.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr7106 probable dehydrogenase
YP_001372112.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMa0391 putative ABC transporter, ATP-binding protein
YP_001372113.1	KEGG: sme:SMa0392 ABC transporter, periplasmic solute-binding protein
YP_001372114.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0394 putative ABC transporter, permease
YP_001372115.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0396 putative ABC transporter, permease
YP_001372116.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
YP_001372117.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMa0400 putative zinc-binding
YP_001372118.1	TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: mlo:mlr7110 transcriptional regulator
YP_001372119.1	PFAM: protein of unknown function UPF0074; Helix-turn-helix type 11 domain protein; KEGG: bja:blr7974 hypothetical protein
YP_001372120.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bam:Bamb_5305 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001372121.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: rle:RL4633 putative transmembrane protein
YP_001372122.1	PFAM: transmembrane pair domain protein; KEGG: pde:Pden_0303 transmembrane pair domain protein
YP_001372123.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa1782 putative LysR-family transcriptional regulator
YP_001372124.1	PFAM: NMT1/THI5 like domain protein; KEGG: bmb:BruAb2_0896 hypothetical ABC transporter, periplasmic binding protein
YP_001372125.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0895 ABC transporter, permease protein
YP_001372126.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA0286 ABC transporter, ATP binding protein
YP_001372127.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0755 hypothetical taurine ABC transporter, permease protein
YP_001372128.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0754 ABC transporter, ATP-binding protein
YP_001372129.1	PFAM: NMT1/THI5 like domain protein; KEGG: bmb:BruAb2_0753 ABC transporter, periplasmic substrate-binding protein
YP_001372130.1	PFAM: alpha/beta hydrolase fold; KEGG: pau:PA14_37530 putative hydrolase
YP_001372131.1	PFAM: extracellular solute-binding protein family 5; KEGG: bmb:BruAb2_0685 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
YP_001372132.1	PFAM: porin; KEGG: bmb:BruAb1_0657 Omp2b, porin
YP_001372133.1	PFAM: extracellular solute-binding protein family 5; KEGG: bmb:BruAb2_0684 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
YP_001372134.1	PFAM: extracellular solute-binding protein family 5; KEGG: bmb:BruAb2_0685 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
YP_001372135.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0686 oligopeptide ABC transporter, permease protein
YP_001372136.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0687 oligopeptide ABC transporter, permease protein
YP_001372137.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bmb:BruAb2_0688 ABC transporter, ATP-binding protein
YP_001372138.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rle:RL0494 putative transmembrane sensory box GGDEF domain protein
YP_001372139.1	KEGG: rpa:RPA0428 hypothetical protein
YP_001372140.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: atu:Atu2022 NADP-dependent alcohol dehydrogenase
YP_001372141.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: rle:RL3211 putative AraC family transcriptional regulator
YP_001372142.1	PFAM: cytochrome c class I; KEGG: bbr:BB1477 putative cytochrome c precursor
YP_001372143.1	KEGG: bbr:BB1476 putative gluconate dehydrogenase
YP_001372144.1	KEGG: bbr:BB1475 putative exported protein
YP_001372145.1	KEGG: bms:BRA0849 hypothetical protein
YP_001372146.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: rle:RL0337 hypothetical protein
YP_001372147.1	TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: gox:GOX2653 integral membrane protein
YP_001372148.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2327 probable transcription regulator protein
YP_001372149.1	KEGG: rso:RSc2328 probable signal peptide protein
YP_001372150.1	KEGG: rpa:RPA2732 hypothetical protein
YP_001372151.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bmb:BruAb2_0663 conserved hypothetical protein TIGR00011
YP_001372152.1	rhizobial iron regulator; in Sinorhizobium meliloti mutations in this gene affect the expression of a number of iron-responsive operons
YP_001372153.1	with HmuTU is involved in the transport of hemin
YP_001372154.1	PFAM: transport system permease protein; KEGG: mes:Meso_1443 transport system permease protein
YP_001372155.1	PFAM: periplasmic binding protein; KEGG: mes:Meso_1442 periplasmic binding protein
YP_001372156.1	PFAM: Haemin-degrading family protein; KEGG: mlo:mll1152 hemin degrading factor
YP_001372157.1	KEGG: mes:Meso_1441 hemin transport system, hemin uptake protein
YP_001372158.1	TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpe:RPE_3149 TonB-dependent heme/hemoglobin receptor family protein
YP_001372159.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bmb:BruAb2_0661 hypothetical protein
YP_001372160.1	KEGG: bmb:BruAb2_0660 hypothetical protein
YP_001372161.1	TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: bms:BRA0565 bacterioferritin
YP_001372162.1	catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit
YP_001372163.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbr:BB2889 putative acetyltransferase
YP_001372164.1	PFAM: basic membrane lipoprotein; KEGG: bms:BRA0567 bmp family protein
YP_001372165.1	PFAM: inner-membrane translocator; KEGG: bms:BRA0568 ABC transporter, permease protein
YP_001372166.1	PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0655 ABC transporter, permease protein
YP_001372167.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0654 ABC transporter, ATP-binding protein
YP_001372168.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bms:BRA0571 quinone oxidoreductase
YP_001372169.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bmb:BruAb2_0652 Pcs, phosphatidylcholine synthase
YP_001372170.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: bmb:BruAb2_0651 UbiH, 2-octaprenyl-6-methoxyphenol hydroxylase
YP_001372171.1	TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: bms:BRA0574 hypothetical protein
YP_001372172.1	PFAM: Invasion associated locus B family protein; KEGG: bmb:BruAb2_0649 hypothetical protein
YP_001372173.1	PFAM: extracellular solute-binding protein family 5; KEGG: bms:BRA0576 peptide ABC transporter, periplasmic peptide-binding protein
YP_001372174.1	PFAM: DSBA oxidoreductase; KEGG: bms:BRA0577 FrnE protein, putative
YP_001372175.1	TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bmb:BruAb2_0645 Mfd, transcription-repair coupling factor
YP_001372176.1	PFAM: protein of unknown function DUF339; KEGG: bmb:BruAb2_0644 hypothetical protein
YP_001372177.1	catalyzes branch migration in Holliday junction intermediates
YP_001372178.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
YP_001372179.1	forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis
YP_001372180.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: bmb:BruAb2_0640 CcdA, cytochrome c-type biogenesis protein CdcA
YP_001372181.1	PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: bms:BRA0585 membrane protein, putative
YP_001372182.1	PFAM: virulence factor family protein; KEGG: bmb:BruAb2_0638 hypothetical protein
YP_001372183.1	KEGG: eca:ECA1775 putative iron-regulated membrane protein
YP_001372184.1	KEGG: bja:bll3105 hypothetical protein
YP_001372185.1	PFAM: band 7 protein; KEGG: sdn:Sden_1062 band 7 protein
YP_001372186.1	PFAM: BA14K family protein; KEGG: bms:BRA0587 hypothetical protein
YP_001372187.1	TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: bme:BMEII0679 sensory transduction histidine kinase
YP_001372188.1	KEGG: atc:AGR_L_315 hypothetical protein
YP_001372189.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: azo:azo3777 GGDEF family protein
YP_001372190.1	lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein
YP_001372191.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bms:BRA0590 hypothetical protein
YP_001372192.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_001372193.1	KEGG: bmb:BruAb2_0632 hypothetical protein
YP_001372194.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rle:RL2077 putative acetyltransferase
YP_001372195.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_001372196.1	PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mll0676 acetyl transferase
YP_001372197.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain
YP_001372198.1	catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins
YP_001372199.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
YP_001372200.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bms:BRA0598 acyl-CoA dehydrogenase family protein
YP_001372201.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
YP_001372202.1	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
YP_001372203.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX
YP_001372204.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: bmb:BruAb2_0622 hypothetical DprA, DNA processing protein
YP_001372206.1	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity
YP_001372207.1	TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; KEGG: bme:BMEII0665 ribonuclease R
YP_001372208.1	PFAM: protein of unknown function DUF983; KEGG: bms:BRA0606 hypothetical protein
YP_001372209.1	PFAM: NUDIX hydrolase; KEGG: bms:BRA0607 MutT/NUDIX family protein
YP_001372210.1	PFAM: major facilitator superfamily MFS_1; KEGG: bms:BRA0608 major facilitator family transporter
YP_001372211.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
YP_001372212.1	involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP
YP_001372213.1	PFAM: response regulator receiver; KEGG: bmb:BruAb2_0613 DivK, polar differentiation response regulator
YP_001372214.1	KEGG: bmb:BruAb2_0612 hypothetical protein
YP_001372215.1	Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation
YP_001372216.1	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function
YP_001372218.1	PFAM: phage integrase family protein; KEGG: ppd:Ppro_1859 phage integrase family protein
YP_001372219.1	PFAM: Prophage CP4-57 regulatory
YP_001372226.1	KEGG: bbr:BB3617 hypothetical protein
YP_001372228.1	PFAM: peptidase U35 phage prohead HK97; KEGG: syf:Synpcc7942_0734 hypothetical protein
YP_001372230.1	KEGG: bmb:BruAb2_0599 hypothetical protein
YP_001372231.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bms:BRA0628 transcriptional regulator, AraC family
YP_001372232.1	KEGG: sil:SPO2406 ISSpo6, transposase orf A
YP_001372233.1	PFAM: periplasmic solute binding protein; KEGG: sme:SMc02509 putative iron-binding periplasmic ABC transporter protein
YP_001372234.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:RL3885 putative Fur regulated salmonella iron ABC transporter
YP_001372235.1	PFAM: transport system permease protein; ABC-3 protein; KEGG: rle:RL3886 putative Fur regulated salmonella iron ABC transporter component
YP_001372236.1	PFAM: transport system permease protein; ABC-3 protein; KEGG: rle:RL3887 putative iron transmembrane ABC transporter component
YP_001372237.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: eca:ECA4250 ABC transporter ATP-binding protein
YP_001372238.1	PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA4249 ABC transporter periplasmic binding protein
YP_001372239.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4248 ABC transporter permease protein
YP_001372240.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4247 ABC transporter permease protein
YP_001372241.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: rle:pRL110031 putative HTH-type transcriptional regulator
YP_001372242.1	KEGG: gme:Gmet_2946 HAD-superfamily hydrolase subfamily IA, variant 3
YP_001372243.1	PFAM: aldo/keto reductase; KEGG: atc:AGR_C_2023 hypothetical protein
YP_001372244.1	PFAM: FAD dependent oxidoreductase; KEGG: bms:BRA0630 amino acid dehydrogenase, putative
YP_001372245.1	PFAM: extracellular solute-binding protein family 3; KEGG: bmb:BruAb2_0595 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001372246.1	PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: bmb:BruAb2_0594 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001372247.1	PFAM: TrkA-N domain protein; Saccharopine dehydrogenase; KEGG: bmb:BruAb2_0593 hypothetical protein
YP_001372248.1	PFAM: regulatory protein AsnC/Lrp family; Helix-turn-helix type 11 domain protein; KEGG: bms:BRA0634 transcriptional regulator, AsnC family
YP_001372249.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0329 spermidine/putrescine ABC transporter, permease protein
YP_001372250.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0328 spermidine/putrescine ABC transporter, permease protein, putative
YP_001372251.1	TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bms:BRA0327 spermidine/putrescine ABC transporter, ATP-binding protein, putative
YP_001372252.1	PFAM: extracellular solute-binding protein family 1; KEGG: bmb:BruAb2_0855 hypothetical spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein
YP_001372253.1	catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA
YP_001372254.1	TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; KEGG: bmb:BruAb2_0589 PcaJ, 3-oxoadipate CoA-transferase, beta subunit
YP_001372255.1	TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; KEGG: bms:BRA0638 3-oxoadipate CoA-transferase, alpha subunit
YP_001372256.1	TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bms:BRA0639 transcriptional regulator PcaR, putative
YP_001372257.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bmb:BruAb2_0586 PobR
YP_001372258.1	catalyzes the formation of protocatechuate from 4-hydroxybenzoate
YP_001372259.1	TIGRFAM: pca operon transcription factor PcaQ; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bme:BMEII0639 transcriptional regulatory protein, lysR family
YP_001372260.1	TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: bmb:BruAb2_0583 PcaL, 3-oxoadipate enol-lactone hydrolase
YP_001372261.1	TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; KEGG: bmb:BruAb2_0582 PcaC, 4-carboxymuconolactone decarboxylase
YP_001372262.1	TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: bmb:BruAb2_0581 PcaH, protocatechuate 3,4-dioxygenase, beta subunit
YP_001372263.1	TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: bmb:BruAb2_0580 protocatechuate 3,4-dioxygenase, alpha subunit
YP_001372264.1	Catalyzes the cycloisomerization of cis,cis-muconate
YP_001372265.1	PFAM: Extracellular ligand-binding receptor; KEGG: bmb:BruAb2_0578 amino acid ABC transporter, periplasmic amino-acid binding protein
YP_001372266.1	PFAM: inner-membrane translocator; KEGG: bms:BRA0649 branched-chain amino acid ABC transporter, permease protein
YP_001372267.1	PFAM: inner-membrane translocator; KEGG: bms:BRA0650 branched-chain amino acid ABC transporter, permease protein
YP_001372268.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0575 branched-chain amino acid ABC transporter, ATP-binding protein
YP_001372269.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA0652 branched-chain amino acid ABC transporter, ATP-binding protein
YP_001372270.1	TIGRFAM: adenine deaminase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bms:BRA0653 adenine deaminase
YP_001372271.1	PFAM: beta-lactamase; KEGG: atc:AGR_C_4566 hypothetical protein
YP_001372272.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_4567 oligopeptide transport ATP-binding protein AppF
YP_001372273.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_4569 dipeptide transporter DppD homolog
YP_001372274.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4571 dipeptide abc transporter, dipeptide-binding protein
YP_001372275.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4572 dipeptide transport system permease protein
YP_001372276.1	PFAM: extracellular solute-binding protein family 5; KEGG: atc:AGR_C_4574 putative hemin-binding lipoprotein
YP_001372277.1	PFAM: peptidase M19 renal dipeptidase; KEGG: bmb:BruAb2_0572 renal dipeptidase family protein
YP_001372278.1	KEGG: sme:SMa0087 hypothetical protein
YP_001372279.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sme:SMa0085 putative D-isomer specific 2-hydroxyacid dehydrogenase
YP_001372280.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa0083 putative ABC transporter ATP-binding protein
YP_001372281.1	PFAM: extracellular solute-binding protein family 3; KEGG: sme:SMa0082 putative ABC transporter, periplasmic solute-binding protein
YP_001372282.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0081 putative ABC transporter permease
YP_001372283.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0079 putative ABC transporter permease
YP_001372284.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMa0078 putative LacI-family transcriptional regulator
YP_001372285.1	PFAM: extracellular solute-binding protein family 1; KEGG: bms:BRA0655 glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein
YP_001372286.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0656 glycerol-3-phosphate ABC transporter, permease protein
YP_001372287.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0569 UgpE, glycerol-3-phosphate ABC transporter, permease protein
YP_001372288.1	part of the UgpABCE glycerol-3-phosphate uptake system
YP_001372289.1	PFAM: Citrate transporter; TrkA-C domain protein; KEGG: bmb:BruAb2_0567 transporter, TrkA family
YP_001372290.1	TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: rle:RL0783 putative gluconokinase
YP_001372291.1	catalyzes the formation of 5-dehydro-D-gluconate from D-gluconate
YP_001372292.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMa0246 putative GntR-family transcriptional regulator
YP_001372293.1	PFAM: FAD linked oxidase domain protein; KEGG: atc:AGR_C_4965 hypothetical protein
YP_001372294.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: atc:AGR_C_4963 hypothetical protein
YP_001372295.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rle:RL3773 putative 2-hydroxy-3-oxopropionate reductase
YP_001372296.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: atc:AGR_C_463 hypothetical protein
YP_001372297.1	KEGG: atc:AGR_C_4970 hypothetical protein
YP_001372298.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sme:SMa0249 hypothetical protein
YP_001372299.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMa0250 conserved hypothetical DedA-like protein
YP_001372300.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: atc:AGR_C_4976 hypothetical protein
YP_001372301.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMc03130 hypothetical protein
YP_001372302.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bms:BRA0660 cytidine/deoxycytidylate deaminase family protein
YP_001372303.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bms:BRA0661 uracil-xanthine permease, putative
YP_001372304.1	KEGG: bmb:BruAb2_0563 hypothetical protein
YP_001372306.1	PFAM: protein of unknown function DUF1127; KEGG: bmb:BruAb2_0561 hypothetical protein
YP_001372307.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bms:BRA0666 hypothetical protein
YP_001372308.1	PFAM: aminotransferase class IV; KEGG: bmf:BAB2_0572 aminotransferase, class IV
YP_001372309.1	PFAM: protein of unknown function DUF81; KEGG: bmb:BruAb2_0558 hypothetical membrane protein
YP_001372310.1	proposed role in polysaccahride synthesis
YP_001372311.1	catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
YP_001372312.1	One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
YP_001372313.1	TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K transporting ATPase KdpC subunit; KEGG: mlo:mll3129 potassium-transporting atpase C chain, KdpC
YP_001372314.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: mlo:mll3127 two-component sensor KdpD
YP_001372315.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rle:pRL110377 putative Kdp operon transcriptional regulatory protein
YP_001372316.1	KEGG: bms:BRA0671 hypothetical protein
YP_001372317.1	PFAM: aldehyde dehydrogenase; KEGG: bmb:BruAb2_0555 aldehyde dehydrogenase family protein
YP_001372318.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMa0110 putative ABC transporter ATP-binding protein
YP_001372319.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bja:bll4893 ABC transporter ATP-binding protein
YP_001372320.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0106 putative ABC transporter, permease
YP_001372321.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0105 putative ABC transporter permease protein
YP_001372322.1	PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMa0104 putative ABC transporter, periplasmic solute-binding protein
YP_001372323.1	PFAM: Amidohydrolase 3; KEGG: sme:SMa0101 hypothetical protein
YP_001372324.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: rpa:RPA2358 2OG-Fe(II) oxygenase superfamily
YP_001372325.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2361 putative ABC transporter, permease protein
YP_001372326.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA2360 ABC transporter, ATP-binding protein
YP_001372327.1	TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: rpa:RPA2359 putative periplasmic protein
YP_001372328.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: rru:Rru_A0776 aspartate/tyrosine/aromatic aminotransferase
YP_001372329.1	PFAM: glycosyl transferase family 3; regulatory protein LysR; KEGG: atc:AGR_L_1856 hypothetical protein
YP_001372330.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: atc:AGR_L_1858 outer membrane protein irgA precursor
YP_001372331.1	PFAM: putative esterase; KEGG: bat:BAS3579 hypothetical protein
YP_001372332.1	PFAM: periplasmic binding protein; KEGG: bmb:BruAb2_0553 iron compound ABC transporter, periplasmic iron
YP_001372333.1	PFAM: transport system permease protein; KEGG: bms:BRA0676 iron compound ABC transporter, permease protein
YP_001372334.1	PFAM: transport system permease protein; KEGG: bme:BMEII0605 ferric anguibactin transport system permease protein FatC
YP_001372335.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA0678 iron compound ABC transporter, ATP-binding protein
YP_001372336.1	KEGG: atc:AGR_L_695 hypothetical protein
YP_001372337.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_692 oligopeptide ABC transporter (permease)
YP_001372338.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_689 oligopeptide ABC transporter (permease)
YP_001372339.1	PFAM: extracellular solute-binding protein family 5; KEGG: atc:AGR_L_687 oligopeptide ABC transporter (oligopeptide-binding protein)
YP_001372340.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: atc:AGR_L_685 hypothetical ABC transporter ATP-binding protein YliA
YP_001372341.1	KEGG: bms:BRA0679 hypothetical protein
YP_001372342.1	PFAM: Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: bme:BMEII0602 N-methylhydantoinase (ATP-hydrolyzing) / 5-oxoprolinase
YP_001372343.1	PFAM: extracellular solute-binding protein family 3; KEGG: bms:BRA0682 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001372344.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0546 amino acid ABC transporter, permease protein
YP_001372345.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA0684 amino acid ABC transporter, ATP-binding protein
YP_001372346.1	PFAM: Ppx/GppA phosphatase; KEGG: bms:BRA0685 phosphatase, Ppx/GppA family
YP_001372347.1	PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: bme:BMEII0597 23S ribsomal RNA methyltransferase
YP_001372348.1	PFAM: major facilitator superfamily MFS_1; KEGG: bme:BMEII0596 methylenomycin A resistance protein
YP_001372349.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bmb:BruAb2_0540 hypothetical ATP-binding ABC transporter protein
YP_001372350.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0691 sugar ABC transporter, permease protein, putative
YP_001372351.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0692 sugar ABC transporter, permease protein, putative
YP_001372352.1	PFAM: extracellular solute-binding protein family 1; KEGG: bmb:BruAb2_0537 sugar ABC transporter, periplasmic sugar-binding protein
YP_001372353.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_001372354.1	involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth
YP_001372355.1	PFAM: protein of unknown function DUF442; KEGG: bms:BRA0697 hypothetical protein
YP_001372356.1	KEGG: bme:BMEII0586 hypothetical protein
YP_001372357.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: atu:Atu4628 GGDEF family protein
YP_001372358.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0699 iron compound ABC transporter, permease protein, putative
YP_001372359.1	PFAM: extracellular solute-binding protein family 1; KEGG: bme:BMEII0584 iron(III)-binding periplasmic protein precursor
YP_001372360.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bme:BMEII0583 iron(III)-transport ATP-binding protein SfuC
YP_001372361.1	PFAM: FAD dependent oxidoreductase; KEGG: bms:BRA0702 D-amino acid oxidase family protein
YP_001372362.1	PFAM: superoxide dismutase copper/zinc binding; KEGG: bmb:BruAb2_0527 SodC, superoxide dismutase, Cu-Zn
YP_001372363.1	laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification
YP_001372364.1	KEGG: bmb:BruAb2_0525 hypothetical protein
YP_001372365.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bms:BRA0706 major facilitator family transporter
YP_001372366.1	TIGRFAM: alkylhydroperoxidase, AhpD family; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bmb:BruAb2_0523 AhpD, alkyl hydroperoxide reductase D
YP_001372367.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bmb:BruAb2_0522 AhpC, alkyl hydroperoxide reductase C
YP_001372368.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bme:BMEII0576 hydrogen peroxide-inducible genes activator
YP_001372369.1	PFAM: protein of unknown function DUF1612; KEGG: bms:BRA0710 hypothetical protein
YP_001372370.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bmb:BruAb2_0519 IdhA, myo-inositol 2-dehydrogenase
YP_001372371.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bme:BMEII0573 transcriptional regulator, RpiR family
YP_001372372.1	PFAM: PfkB domain protein; KEGG: bmb:BruAb2_0517 IolC myo-catabolism protein
YP_001372373.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bms:BRA0714 TPP-requiring enzyme IolD
YP_001372374.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bmb:BruAb2_0515 IolE protein
YP_001372375.1	PFAM: Myo-inositol catabolism IolB domain protein; KEGG: bme:BMEII0569 iolB protein
YP_001372376.1	PFAM: DoxX family protein; KEGG: rle:RL4169 putative transmembrane DoxD family protein
YP_001372377.1	PFAM: inositol monophosphatase; KEGG: bme:BMEII0568 myo-inositol-1(or 4)-monophosphatase
YP_001372378.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bmb:BruAb2_0512 ABC transporter, ATP-binding protein
YP_001372379.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0719 ABC transporter, permease protein
YP_001372380.1	proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the protein from Pseudomonas does not have this domain
YP_001372381.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: bmb:BruAb2_0508 proline dehydrogenase transcriptional activator
YP_001372382.1	PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: mlo:mll4920 mannitol dehydrogenase
YP_001372383.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ret:RHE_PC00217 probable zinc-binding dehydrogenase protein
YP_001372384.1	Converts D-sorbitol to L-sorbose
YP_001372385.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: csa:Csal_2614 ABC transporter related
YP_001372386.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_01296 ABC-type sugar transport system, permease component
YP_001372387.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_0634 binding-protein-dependent transport systems inner membrane component
YP_001372388.1	PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_3289 periplasmic sorbitol-binding protein
YP_001372389.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sme:SMb21372 putative transcriptional regulator, LacI family protein
YP_001372390.1	PFAM: protein of unknown function DUF451; KEGG: rru:Rru_A2600 protein of unknown function DUF451
YP_001372391.1	TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: psb:Psyr_3369 twin-arginine translocation pathway signal:Tat-translocated enzyme:Dyp-type peroxidase
YP_001372392.1	PFAM: protein of unknown function DUF451; KEGG: pst:PSPTO_3597 hypothetical protein
YP_001372393.1	PFAM: iron permease FTR1; KEGG: pfo:Pfl_2872 iron permease FTR1
YP_001372394.1	KEGG: mlo:mll1065 hypothetical protein
YP_001372395.1	KEGG: mlo:mll1067 hypothetical protein
YP_001372396.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
YP_001372397.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
YP_001372398.1	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein
YP_001372399.1	PFAM: protein of unknown function DUF1127; KEGG: bmb:BruAb2_0503 hypothetical protein
YP_001372400.1	PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_3492 major facilitator superfamily MFS_1
YP_001372401.1	PFAM: Endoribonuclease L-PSP; KEGG: mlo:mlr1297 hypothetical protein
YP_001372402.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bms:BRA0729 pyridine nucleotide-disulphide oxidoreductase family protein
YP_001372403.1	PFAM: Creatininase; KEGG: vei:Veis_3147 creatininase
YP_001372404.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_3146 ABC transporter related
YP_001372405.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3145 binding-protein-dependent transport systems inner membrane component
YP_001372406.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: vei:Veis_3139 amidohydrolase 3
YP_001372407.1	PFAM: FAD linked oxidase domain protein; KEGG: vei:Veis_3144 FAD linked oxidase domain protein
YP_001372408.1	PFAM: NMT1/THI5 like domain protein; KEGG: vei:Veis_3143 perplasmic binding protein of ABC transporter
YP_001372409.1	PFAM: regulatory protein TetR; KEGG: pfl:PFL_0730 transcriptional regulator, TetR family
YP_001372410.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bmb:BruAb2_0501 transcriptional regulator, hypothetical
YP_001372411.1	PFAM: N-formylglutamate amidohydrolase; KEGG: bms:BRA0731 hypothetical protein
YP_001372412.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: rsp:RSP_2322 TRAP-T family transporter, DctQ (4TMs) subunit
YP_001372413.1	PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pub:SAR11_1292 TrapT family
YP_001372414.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pde:Pden_4546 TRAP dicarboxylate transporter-DctP subunit
YP_001372415.1	PFAM: glutamine synthetase catalytic region; KEGG: bms:BRA0732 glutamine synthetase family protein
YP_001372416.1	PFAM: aldehyde dehydrogenase; KEGG: mlo:mll3072 dehydrogenase, (succinatesemialdehyde dehydrogenase, aldehyde dehydrogenase, aldehyde dehydrogenase)
YP_001372417.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: bme:BMEII0553 alcohol dehydrogenase
YP_001372418.1	PFAM: BA14K family protein; KEGG: bmb:BruAb2_0497 immunoreactive 14 kDa protein BA14k
YP_001372420.1	PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: bme:BMEII0551 transporter, DME family
YP_001372421.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bms:BRA0738 glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein, putative
YP_001372422.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0739 glycine betaine/L-proline ABC transporter, permease protein, putative
YP_001372423.1	TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; KEGG: bme:BMEII0548 glycine betaine/l-proline transport ATP-binding protein ProV
YP_001372424.1	KEGG: bms:BRA0742 hypothetical protein
YP_001372425.1	PFAM: alanine racemase domain protein; KEGG: bms:BRA0743 amino acid processing enzyme-related protein
YP_001372426.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bms:BRA0744 transcriptional regulator, RpiR family
YP_001372427.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bmb:BruAb2_0487 sugar ABC transporter, ATP-binding protein, hypothetical
YP_001372428.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bmb:BruAb2_0486 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001372429.1	PFAM: extracellular solute-binding protein family 1; KEGG: bmb:BruAb2_0484 sugar ABC transporter, periplasmic sugar-binding protein
YP_001372430.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0749 sugar ABC transporter, permease protein, putative
YP_001372431.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0482 hypothetical sugar ABC transporter, permease protein
YP_001372432.1	TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: bms:BRA0751 endoribonuclease L-PSP, putative
YP_001372433.1	PFAM: uncharacterised conserved protein UCP012702; MlrC domain protein; KEGG: bme:BMEII0539 hypothetical cytosolic protein
YP_001372434.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ecv:APECO1_2071 C4-dicarboxylate transport system permease large protein
YP_001372435.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ecv:APECO1_2070 C4-dicarboxylate transport system permease small protein
YP_001372436.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ecv:APECO1_2069 C4-dicarboxylate-binding protein
YP_001372437.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pde:Pden_4931 alcohol dehydrogenase, zinc-binding domain protein
YP_001372438.1	PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: bms:BRA0806 hydrolase, UxaA family
YP_001372439.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: atc:AGR_C_5113 hypothetical protein
YP_001372440.1	PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: atc:AGR_C_5101 altronate oxidoreductase
YP_001372441.1	PFAM: response regulator receiver; SMART: regulatory protein LuxR; KEGG: ret:RHE_PF00479 probable two-component response regulator protein
YP_001372442.1	PFAM: ATP-binding region ATPase domain protein; SMART: GAF domain protein; KEGG: atc:AGR_L_1636 hypothetical protein
YP_001372443.1	KEGG: atc:AGR_L_1638 putative simple sugar transport system substrate-binding protein
YP_001372444.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_1642 sugar ABC transporter, ATP-binding protein
YP_001372445.1	PFAM: inner-membrane translocator; KEGG: atc:AGR_L_1644 hypothetical ABC-transporter gene similar to teuC1 gene
YP_001372446.1	PFAM: inner-membrane translocator; KEGG: atc:AGR_L_1646 ribose transport protein rbsC
YP_001372447.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: atc:AGR_L_1647 possible gluconolactonase precursor
YP_001372448.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0478 iron compound ABC transporter, ATP-binding protein
YP_001372449.1	PFAM: transport system permease protein; ABC-3 protein; KEGG: bmb:BruAb2_0477 iron compound ABC transporter, permease protein
YP_001372450.1	PFAM: periplasmic binding protein; KEGG: bms:BRA0756 iron compound ABC transporter, periplasmic iron compound-binding protein
YP_001372451.1	PFAM: Uncharacterized protein UPF0065; KEGG: mes:Meso_3313 uncharacterized protein UPF0065
YP_001372452.1	KEGG: sme:SMb20725 putative tricarboxylic transport membrane protein
YP_001372453.1	PFAM: protein of unknown function DUF112 transmembrane; KEGG: mes:Meso_3315 protein of unknown function DUF112, transmembrane
YP_001372454.1	KEGG: bms:BRA0175 hypothetical protein
YP_001372455.1	PFAM: MgtC/SapB transporter; KEGG: mes:Meso_3446 MgtC/SapB transporter
YP_001372456.1	KEGG: atc:AGR_L_1439 hypothetical protein
YP_001372457.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: bmb:BruAb1_1593 sensory box histidine kinase
YP_001372458.1	PFAM: AsmA family protein; KEGG: bmb:BruAb1_1595 AsmA family protein
YP_001372459.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR1609 spermidine/putrescine ABC transporter, permease protein, putative
YP_001372460.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bme:BMEI0413 putrescine transport system permease protein PotH
YP_001372461.1	TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bmb:BruAb1_1598 spermidine/putrescine ABC transporter, ATP-binding protein
YP_001372462.1	PFAM: extracellular solute-binding protein family 1; KEGG: bme:BMEI0411 putrescine-binding periplasmic protein
YP_001372463.1	PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: bms:BR1613 transcriptional regulator, Cro/CI family
YP_001372464.1	TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: bmb:BruAb1_1601 AceA, isocitrate lyase
YP_001372465.1	KEGG: bmb:BruAb1_1602 hypothetical protein
YP_001372466.1	KEGG: bmb:BruAb1_1603 hypothetical protein
YP_001372467.1	PFAM: protein of unknown function UPF0187; KEGG: rpe:RPE_3279 protein of unknown function UPF0187
YP_001372468.1	KEGG: mlo:mlr1499 hypothetical protein
YP_001372469.1	KEGG: mlo:mlr1499 hypothetical protein
YP_001372470.1	PFAM: glutamine synthetase catalytic region; KEGG: bms:BRA0768 glutamine synthetase family protein
YP_001372471.1	PFAM: FAD dependent oxidoreductase; KEGG: bms:BRA0770 D-amino acid oxidase family protein
YP_001372472.1	PFAM: regulatory protein MarR; KEGG: bmb:BruAb2_0461 transcriptional regulator, MarR family
YP_001372473.1	PFAM: CBS domain containing protein; Chloride channel core; KEGG: ret:RHE_PC00165 probable chloride channel protein
YP_001372474.1	KEGG: bms:BRA0772 hypothetical protein
YP_001372475.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: sme:SMc04167 putative histidine-rich transporter transmembrane protein
YP_001372476.1	PFAM: protein of unknown function DUF156; KEGG: nha:Nham_2648 protein of unknown function DUF156
YP_001372477.1	PFAM: Prephenate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: jan:Jann_3543 prephenate dehydrogenase
YP_001372478.1	PFAM: major facilitator superfamily MFS_1; KEGG: pde:Pden_4572 major facilitator superfamily MFS_1
YP_001372479.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: bmb:BruAb2_0459 transcriptional regulator, AsnC family
YP_001372480.1	PFAM: AzlC family protein; KEGG: bms:BRA0774 AzlC family protein
YP_001372481.1	PFAM: branched-chain amino acid transport; KEGG: bmb:BruAb2_0457 hypothetical protein
YP_001372482.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_001372483.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: reu:Reut_B5468 alkylhydroperoxidase AhpD core
YP_001372484.1	PFAM: Glutathione S-transferase domain; KEGG: mes:Meso_1469 glutathione S-transferase-like
YP_001372485.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mlo:mll4929 transcriptional regulator
YP_001372486.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mlo:mlr8380 hypothetical protein
YP_001372487.1	PFAM: major facilitator superfamily MFS_1; KEGG: bmb:BruAb2_0456 multi-drug resistance efflux protein
YP_001372488.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: atc:AGR_C_1925 Yed j hypothetical protein
YP_001372489.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_001372490.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_001372491.1	TIGRFAM: 6-phosphogluconolactonase; KEGG: bmb:BruAb2_0453 Pgl, 6-phosphogluconolactonase
YP_001372492.1	catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate
YP_001372493.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
YP_001372494.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: bmb:BruAb2_0100 hypothetical polysaccharide accessory transport protein
YP_001372495.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: rpc:RPC_0034 metal dependent phosphohydrolase
YP_001372496.1	KEGG: mlo:mll4938 hypothetical protein
YP_001372497.1	catalyzes the formation of L-proline from pyrroline-5-carboxylate
YP_001372498.1	PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: bme:BMEII0508 oligopeptide transport ATP-binding protein OppF
YP_001372499.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmf:BAB2_0454 uridine kinase:ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase
YP_001372500.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0448 peptide ABC transporter, permease protein
YP_001372501.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0447 peptide ABC transporter, permease protein
YP_001372502.1	PFAM: extracellular solute-binding protein family 5; KEGG: bmb:BruAb2_0446 peptide peptide ABC transporter, periplasmic peptide-binding protein
YP_001372503.1	KEGG: bmb:BruAb2_0445 hypothetical protein
YP_001372504.1	KEGG: bmb:BruAb2_0443 hypothetical protein
YP_001372505.1	class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine
YP_001372506.1	PFAM: regulatory protein LuxR; KEGG: rle:RL0627 putative GerE family transcriptional regulator
YP_001372507.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: rle:RL0622 putative HlyD family secretion protein
YP_001372508.1	TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:RL0623 putative transmembrane component of ABC transporter
YP_001372509.1	KEGG: rle:RL0624 hypothetical protein
YP_001372510.1	KEGG: rle:RL0625 hypothetical protein
YP_001372511.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_1904 probable ATP-binding component of ABC maltose/mannitol transporter
YP_001372512.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: atc:AGR_L_1907 probable ABC transporter ATP-binding protein
YP_001372513.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_1909 inner membrane protein malF
YP_001372514.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_1910 probable sugar ABC transporter, permease protein (y4oR)
YP_001372515.1	KEGG: atc:AGR_L_1911 hypothetical protein
YP_001372516.1	PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_1912 putative multiple sugar transport system substrate-binding protein
YP_001372517.1	PFAM: isochorismatase hydrolase; KEGG: reu:Reut_B4687 isochorismatase hydrolase
YP_001372518.1	PFAM: Pirin domain protein; KEGG: nha:Nham_0757 pirin-like
YP_001372519.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: nwi:Nwi_0615 trancriptional regulatory protein, LysR family
YP_001372520.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_4759 transcriptional regulator, LysR family
YP_001372521.1	PFAM: isochorismatase hydrolase; KEGG: ycaC; hypothetical protein
YP_001372522.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azo:azo2518 LysR-family transcriptional regulator
YP_001372523.1	KEGG: bmb:BruAb1_0415 hypothetical protein
YP_001372524.1	PFAM: secretion protein HlyD family protein; KEGG: rpb:RPB_0207 secretion protein HlyD
YP_001372525.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: nha:Nham_3278 drug resistance transporter EmrB/QacA subfamily
YP_001372526.1	PFAM: YceI family protein; KEGG: stm:STM1621 putative periplasmic protein
YP_001372527.1	PFAM: LrgB family protein; KEGG: rpb:RPB_0492 LrgB-like protein
YP_001372528.1	PFAM: LrgA family protein; KEGG: aeh:Mlg_0425 LrgA family protein
YP_001372529.1	SMART: helix-turn-helix- domain containing protein AraC type; KEGG: aci:ACIAD2672 putative transcriptional regulator
YP_001372530.1	PFAM: monooxygenase FAD-binding; KEGG: bja:bll6080 hypothetical protein
YP_001372531.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: bja:blr6079 hypothetical protein
YP_001372532.1	PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr6078 probable substrate-binding protein
YP_001372533.1	PFAM: inner-membrane translocator; KEGG: bja:blr1064 ABC transporter permease protein
YP_001372534.1	PFAM: inner-membrane translocator; KEGG: bja:blr1065 ABC transporter permease protein
YP_001372535.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_5130 ABC transporter related
YP_001372536.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr1067 ABC transporter ATP-binding protein
YP_001372537.1	TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll6076 putative acetyl-CoA synthetase
YP_001372538.1	KEGG: mlo:mll0618 hypothetical protein
YP_001372539.1	PFAM: regulatory protein LuxR; KEGG: ava:Ava_2028 two component transcriptional regulator, LuxR family
YP_001372540.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: psp:PSPPH_4548 hypothetical protein
YP_001372541.1	PFAM: NADPH-dependent FMN reductase; KEGG: pde:Pden_5119 NADPH-dependent FMN reductase
YP_001372542.1	PFAM: alpha/beta hydrolase fold; KEGG: fal:FRAAL0572 putative hydrolase
YP_001372543.1	PFAM: major facilitator superfamily MFS_1; KEGG: ppu:PP_1710 MFS transporter, phthalate permease family
YP_001372544.1	PFAM: regulatory protein MarR; KEGG: mlo:mlr5447 transcriptional regulator
YP_001372545.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bca:BCE_0464 benzoate transport protein, putative
YP_001372546.1	Involved in the incorporation of exogenous aryl acids in the biosynthesis of aromatic amino acids: catalysis of the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
YP_001372547.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bja:bll3411 indolepyruvate ferredoxin oxidoreductase alpha subunit
YP_001372548.1	catalyzes the conversion of salicylyl-CoA to gentisyl-CoA
YP_001372549.1	PFAM: short-chain dehydrogenase/reductase SDR; Shikimate/quinate 5-dehydrogenase; KR domain protein; KEGG: rpe:RPE_3228 short-chain dehydrogenase/reductase SDR
YP_001372550.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001372551.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bja:blr3437 putative acyl-CoA dehydrogenase
YP_001372552.1	PFAM: Endoribonuclease L-PSP; KEGG: mlo:mll5429 hypothetical protein
YP_001372553.1	PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bcn:Bcen_2265 3-hydroxyacyl-CoA dehydrogenase, NAD-binding
YP_001372554.1	catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA
YP_001372555.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reu:Reut_C6220 regulatory protein GntR, HTH:GntR, C-terminal
YP_001372556.1	PFAM: aminotransferase class V; KEGG: pat:Patl_0411 aminotransferase, class V
YP_001372557.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll5422 ABC transporter permease protein
YP_001372558.1	PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: mlo:mll5423 unknown protein
YP_001372559.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: mbu:Mbur_0428 aminotransferase, class I and II
YP_001372560.1	PFAM: regulatory protein MarR; KEGG: rpe:RPE_3230 transcriptional regulator, MarR family
YP_001372561.1	PFAM: cyclase family protein; KEGG: mlo:mlr5444 hypothetical protein
YP_001372562.1	KEGG: bmb:BruAb2_0441 hypothetical protein
YP_001372563.1	PFAM: peptidase S24 S26A and S26B; KEGG: bmb:BruAb2_0440 peptidase, S24 family
YP_001372564.1	PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bme:BMEII0497 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase
YP_001372565.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_001372566.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bms:BRA0795 acyl-CoA dehydrogenase family protein
YP_001372567.1	KEGG: sme:SMc01546 hypothetical protein
YP_001372568.1	PFAM: protein of unknown function DUF1236; KEGG: mlo:mlr4377 hypothetical protein
YP_001372569.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bms:BRA0820 transcriptional regulator, MerR family
YP_001372570.1	PFAM: Peptidoglycan-binding domain 1 protein; Sel1 domain protein repeat-containing protein; KEGG: bmb:BruAb2_0410 peptidoglycan-binding protein
YP_001372572.1	PFAM: protein of unknown function DUF81; KEGG: bmb:BruAb2_0409 hypothetical membrane protein
YP_001372573.1	KEGG: bmb:BruAb2_0408 hypothetical protein
YP_001372574.1	KEGG: bmb:BruAb2_0407 hypothetical protein
YP_001372575.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: bms:BRA0826 ATP-dependent RNA helicase, DEAD/DEAH box family
YP_001372576.1	KEGG: mlo:mll5484 putative mRNA 3-end processing factor
YP_001372577.1	catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA
YP_001372578.1	KEGG: bmb:BruAb2_0404 hypothetical protein
YP_001372579.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: bme:BMEII0460 2-nitropropane dioxygenase
YP_001372580.1	KEGG: bme:BMEII0459 hypothetical protein
YP_001372581.1	TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: mes:Meso_3892 transcriptional regulator, MerR family
YP_001372582.1	PFAM: Heavy metal transport/detoxification protein; KEGG: pau:PA14_18800 putative heavy metal binding protein
YP_001372583.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: atc:AGR_C_2205 hypothetical protein
YP_001372584.1	PFAM: glutaredoxin; KEGG: dge:Dgeo_2583 glutaredoxin
YP_001372585.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: shw:Sputw3181_1129 efflux transporter, RND family, MFP subunit
YP_001372586.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rpd:RPD_2310 hydrophobe/amphiphile efflux-1 HAE1
YP_001372587.1	PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: mes:Meso_0994 protein of unknown function DUF899, thioredoxin-like
YP_001372588.1	KEGG: mes:Meso_0993 hypothetical protein
YP_001372589.1	PFAM: Tetratricopeptide TPR_4; Helix-turn-helix type 11 domain protein; KEGG: mes:Meso_0992 tetratricopeptide TPR_4
YP_001372590.1	KEGG: mes:Meso_0991 hypothetical protein
YP_001372591.1	PFAM: putative sugar-binding domain protein; KEGG: ret:RHE_PA00021 putative transcriptional regulator protein, AsnC/GntR family
YP_001372592.1	PFAM: PfkB domain protein; KEGG: rde:RD1_3878 sugar kinase, putative
YP_001372593.1	PFAM: inner-membrane translocator; KEGG: sme:SMb20318 putative sugar ABC transporter permease protein
YP_001372594.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20317 putative sugar ABC transporter ATP-binding protein
YP_001372595.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20316 putative ABC transporter periplasmic sugar-binding protein
YP_001372596.1	PFAM: inner-membrane translocator; KEGG: rru:Rru_A1335 inner-membrane translocator
YP_001372597.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_1620 RbsA-2, ribose ABC transporter, ATP-binding protein
YP_001372598.1	PFAM: inner-membrane translocator; KEGG: bmb:BruAb1_1619 RbsC-2, ribose ABC transporter, permease protein
YP_001372599.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bms:BR1630 sugar-binding transcriptional regulator, LacI family
YP_001372600.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bms:BR1629 short chain dehydrogenase
YP_001372601.1	PFAM: Dak kinase; KEGG: bme:BMEI0396 dihydroxyacetone kinase
YP_001372602.1	TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: bmb:BruAb1_1615 dihydroxyacetone kinase, C-terminal domain
YP_001372603.1	PFAM: Dak kinase; putative sugar-binding domain protein; KEGG: bme:BMEI0398 deoxyribonucleoside regulator / dihydroxyacetone kinase
YP_001372604.1	TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: bmb:BruAb1_1613 dihydroxyacetone kinase family
YP_001372605.1	KEGG: bja:blr6818 hypothetical protein
YP_001372606.1	PFAM: FAD dependent oxidoreductase; KEGG: aav:Aave_2554 D-amino-acid dehydrogenase
YP_001372607.1	PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr8119 ABC transporter ATP-binding protein
YP_001372608.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr8118 ABC transporter permease protein
YP_001372609.1	KEGG: vei:Veis_0794 hypothetical protein
YP_001372610.1	PFAM: extracellular solute-binding protein family 3; KEGG: bja:blr6816 hypothetical protein
YP_001372611.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: rru:Rru_A1172 transcriptional regulator, AsnC family
YP_001372612.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: csa:Csal_0665 transcriptional regulator, LysR family
YP_001372613.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rme:Rmet_5039 thiamine pyrophosphate enzyme-like TPP-binding
YP_001372614.1	PFAM: transport system permease protein; KEGG: pfl:PFL_3625 ferric vibriobactin ABC transporter, permease protein VC0778
YP_001372615.1	PFAM: transport system permease protein; KEGG: pfl:PFL_3624 ferric vibriobactin ABC transporter, permease protein VC0777
YP_001372616.1	with FepCDG is involved in the transport of ferric enterobactin
YP_001372617.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pau:PA14_10180 ferric enterobactin transport protein FepC
YP_001372618.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pau:PA14_10190 putative transcriptional regulator
YP_001372619.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpb:RPB_2695 TonB-dependent receptor
YP_001372620.1	KEGG: pae:PA4155 hypothetical protein
YP_001372621.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sil:SPO1722 transcriptional regulator, GntR family
YP_001372622.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pde:Pden_5066 TRAP dicarboxylate transporter, DctP subunit
YP_001372623.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sil:SPO1720 TRAP dicarboxylate transporter, DctQ subunit
YP_001372624.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rde:RD1_1049 TRAP dicarboxylate transporter, DctM subunit
YP_001372625.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: atc:AGR_L_3122 hypothetical protein
YP_001372626.1	catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate
YP_001372627.1	PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: sil:SPO1724 D-mannonate oxidoreductase
YP_001372628.1	KEGG: sme:SMa0667 hypothetical protein
YP_001372629.1	PFAM: secretion protein HlyD family protein; KEGG: sme:SMa0669 hypothetical protein
YP_001372630.1	PFAM: Domain of unknown function DUF1850; KEGG: rsp:RSP_1615 hypothetical protein
YP_001372631.1	TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: mes:Meso_4068 TRAP transporter, 4TM/12TM fusion protein
YP_001372632.1	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: rpb:RPB_4331 TRAP transporter solute receptor, TAXI family
YP_001372633.1	PFAM: protein of unknown function DUF1109; KEGG: bmb:BruAb2_0022 hypothetical protein
YP_001372634.1	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bmb:BruAb2_0021 RNA polymerase sigma-70 factor, ECF subfamily
YP_001372635.1	TIGRFAM: Pentapeptide MXKDX repeat protein; KEGG: bme:BMEII0073 hypothetical protein
YP_001372636.1	KEGG: bmb:BruAb2_0019 HupC/HyaC/HydC family protein
YP_001372637.1	PFAM: oxidoreductase molybdopterin binding; KEGG: bms:BRA0018 oxidoreductase, molybdopterin-binding
YP_001372638.1	KEGG: mlo:mlr3617 hypothetical protein
YP_001372639.1	PFAM: Glucitol operon activator; KEGG: mlo:mll3616 unknown protein
YP_001372640.1	PFAM: PTS system protein II sorbitol-specific factor; KEGG: mlo:mll3614 phosphotransferase system enzyme II, C2 component (permease)
YP_001372641.1	PFAM: Sorbitol phosphotransferase protein II domain protein; KEGG: mlo:mll3613 phosphotransferase system enzyme II, BC component
YP_001372642.1	PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: mlo:mll3610 PTS system, glucitol/sorbitol-specific IIA component
YP_001372643.1	TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: mlo:mll3609 phosphotransferase system enzyme I
YP_001372644.1	KEGG: mlo:mlr3606 hypothetical protein
YP_001372645.1	PFAM: putative sugar-binding domain protein; KEGG: mlo:mll3605 transcriptional regulator
YP_001372646.1	PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: bmb:BruAb2_1023 dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase
YP_001372647.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: mlo:mll3628 acetoin dehydrogenase (TPP-dependent) beta chain
YP_001372648.1	PFAM: dehydrogenase E1 component; KEGG: mlo:mll3629 acetoin dehydrogenase (TPP-dependent) alpha chain
YP_001372649.1	PFAM: dihydrodipicolinate reductase; homoserine dehydrogenase NAD-binding; SAF domain protein; KEGG: mlo:mll3630 unknown conserved protein, weak simirarity to homoserine dehydrogenase
YP_001372650.1	PFAM: PTS system Galactitol-specific IIC component; KEGG: vei:Veis_2223 PTS system galactitol-specific IIC component
YP_001372651.1	PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: vei:Veis_2222 putative PTS IIA-like nitrogen-regulatory protein PtsN
YP_001372652.1	PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: vei:Veis_2221 phosphotransferase system, lactose/cellobiose-specific IIB subunit
YP_001372653.1	TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: rle:pRL120279 putative exported tail-specific protease precursor
YP_001372655.1	KEGG: nha:Nham_3588 hypothetical protein
YP_001372656.1	PFAM: protein of unknown function DUF336; KEGG: pde:Pden_1122 protein of unknown function DUF336
YP_001372657.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: pde:Pden_1123 transcriptional regulator, fis family
YP_001372658.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: atc:AGR_C_2063 hypothetical protein
YP_001372659.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: jan:Jann_2826 ABC transporter related
YP_001372660.1	KEGG: mes:Meso_0629 hypothetical protein
YP_001372661.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: sme:SMb21007 hypothetical protein
YP_001372662.1	PFAM: regulatory protein ArsR; KEGG: ret:RHE_CH02431 probable transcriptional regulator protein, ArsR family
YP_001372664.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sme:SMc01657 putative ferrichrome-iron receptor precursor protein
YP_001372665.1	PFAM: ferric iron reductase; KEGG: sme:SMc01658 putative transport protein
YP_001372666.1	PFAM: periplasmic binding protein; KEGG: sme:SMc01659 putative transport transmembrane protein
YP_001372667.1	PFAM: alanine racemase domain protein; KEGG: rpd:RPD_2306 protein of unknown function UPF0001
YP_001372668.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rru:Rru_A1143 regulatory protein GntR
YP_001372669.1	TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: rpd:RPD_2303 benzoate transporter
YP_001372670.1	TIGRFAM: pyridoxal kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: rpd:RPD_2302 pyridoxal kinase
YP_001372671.1	PFAM: nucleoside recognition domain protein; KEGG: atc:AGR_C_1338 hypothetical protein
YP_001372672.1	PFAM: protein of unknown function DUF1634; KEGG: mxa:MXAN_6163 hypothetical protein
YP_001372673.1	PFAM: protein of unknown function DUF81; KEGG: mxa:MXAN_6162 hypothetical protein
YP_001372674.1	PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: mxa:MXAN_6161 transcriptional regulator, GntR family
YP_001372675.1	PFAM: NUDIX hydrolase; KEGG: pat:Patl_1523 NUDIX hydrolase
YP_001372677.1	PFAM: ChaC family protein; KEGG: rle:pRL100236 putative cation transport protein ChaC
YP_001372678.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mes:Meso_0404 transcriptional regulator, LysR family
YP_001372679.1	PFAM: Dimethylmenaquinone methyltransferase; KEGG: ppu:PP_4462 4-hydroxy-4-methyl-2-oxoglutarate aldolase, putative
YP_001372680.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ppu:PP_4463 carbon-nitrogen hydrolase family protein
YP_001372681.1	PFAM: HpcH/HpaI aldolase; KEGG: rha:RHA1_ro02098 probable 4-hydroxy-2-oxovalerate aldolase
YP_001372682.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3393 ABC opine/polyamine transporter, inner membrane subunit
YP_001372683.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3395 ABC opine/polyamine transporter, inner membrane subunit
YP_001372684.1	TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bja:bll3241 ABC transporter ATP-binding protein
YP_001372685.1	PFAM: extracellular solute-binding protein family 1; KEGG: rsp:RSP_3397 ABC opine/polyamine transporter, periplasmic binding protein
YP_001372686.1	PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: atc:AGR_C_4385 glutamine synthetase II (glutamate--ammonia ligase II) (GSII)
YP_001372687.1	KEGG: pau:PA14_19930 hypothetical protein
YP_001372688.1	TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; KEGG: ret:RHE_CH01770 alanine dehydrogenase protein
YP_001372689.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: rle:RL1965 putative AsnC family transcriptional regulator
YP_001372690.1	PFAM: protein of unknown function DUF930; KEGG: sme:SMb20676 hypothetical protein
YP_001372691.1	KEGG: mag:amb3465 predicted protein tyrosine phosphatase
YP_001372692.1	TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: xcb:XC_1931 transport protein
YP_001372693.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pae:PA1672 hypothetical protein
YP_001372694.1	PFAM: regulatory protein TetR; KEGG: rle:RL1167 putative TetR family transcriptional regulator
YP_001372695.1	PFAM: Endoribonuclease L-PSP; KEGG: sme:SMa0089 hypothetical protein
YP_001372696.1	PFAM: regulatory protein MarR; KEGG: pde:Pden_3512 transcriptional regulator, MarR family
YP_001372697.1	KEGG: pde:Pden_3511 hypothetical protein
YP_001372698.1	PFAM: Transglycosylase-associated protein; KEGG: bms:BR0964 hypothetical protein
YP_001372699.1	KEGG: bmb:BruAb2_0856 hypothetical protein
YP_001372700.1	KEGG: pau:PA14_49790 probable transcriptional regulator
YP_001372701.1	PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: bme:BMEII0181 N-acetylglucosamine kinase
YP_001372702.1	TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: bmb:BruAb2_1057 RfF2 family protein
YP_001372703.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bms:BRA1120 cobalamin synthesis protein/P47K family protein
YP_001372704.1	KEGG: pfo:Pfl_0873 hypothetical protein
YP_001372705.1	PFAM: periplasmic solute binding protein; KEGG: bms:BRA1122 zinc ABC transporter, periplasmic zinc-binding protein
YP_001372706.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_1060 ZnuC, zinc ABC transporter, ATP binding protein
YP_001372707.1	PFAM: ABC-3 protein; KEGG: bmb:BruAb2_1061 ZnuB, zinc ABC transporter, permease protein
YP_001372708.1	KEGG: bmb:BruAb2_1062 transcriptional regulator, Fur family
YP_001372709.1	PFAM: type IV pilus assembly PilZ; KEGG: bms:BRA1126 hypothetical protein
YP_001372710.1	KEGG: bmb:BruAb2_1064 hypothetical protein
YP_001372711.1	KEGG: bms:BRA1128 hypothetical protein
YP_001372712.1	KEGG: bmb:BruAb2_1066 hypothetical protein
YP_001372713.1	KEGG: bms:BRA1130 hypothetical protein
YP_001372714.1	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus
YP_001372715.1	membrane protein involved in the flagellar export apparatus
YP_001372716.1	FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum
YP_001372717.1	acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_001372718.1	post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_001372719.1	acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_001372720.1	with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella
YP_001372721.1	with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook
YP_001372722.1	the hook connects flagellar basal body to the flagellar filament
YP_001372723.1	PFAM: transcriptional regulator domain protein; KEGG: bmb:BruAb2_1077 transcriptional regulator
YP_001372724.1	PFAM: Lytic transglycosylase catalytic; KEGG: bmb:BruAb2_1078 hypothetical protein
YP_001372725.1	PFAM: flagellar hook-length control protein; KEGG: bmb:BruAb2_1079 MotD-related protein
YP_001372726.1	a periplasmic protein that interacts with and stabilizes MotB; in Rhizobium, interactions between MotB and MotC at the periplasmic surface of the motor control the energy flux or the energy coupling that drives flagellar rotation
YP_001372727.1	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
YP_001372728.1	KEGG: bmb:BruAb2_1082 hypothetical protein
YP_001372729.1	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_001372730.1	PFAM: flagellin domain protein; KEGG: bmb:BruAb2_1084 flagellin family protein
YP_001372732.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
YP_001372733.1	PFAM: flagellar basal body-associated protein FliL; KEGG: bmb:BruAb2_0155 hypothetical FliL, flagellar protein
YP_001372734.1	part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod
YP_001372735.1	KEGG: bmb:BruAb2_0153 hypothetical protein
YP_001372736.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum
YP_001372737.1	required for the assembly of the flagellar basal body P-ring; Bradyrhizobium japonicum has two types of flagella, a single thick flagella and a few thin flagella; the protein in this cluster is associated with the thin flagella
YP_001372738.1	makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella
YP_001372739.1	forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_001372740.1	with FlgF and B makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_001372741.1	with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella
YP_001372742.1	KEGG: bms:BRA0130 hypothetical protein
YP_001372743.1	involved in type III protein export during flagellum assembly
YP_001372744.1	FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_001372745.1	PFAM: protein of unknown function DUF1217; KEGG: bme:BMEII1108 flagellar basal-body rod protein FlgF
YP_001372746.1	With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
YP_001372747.1	PFAM: surface presentation of antigens (SPOA) protein; KEGG: bms:BRA0125 flagellar motor switch protein FliM, putative
YP_001372748.1	KEGG: bmb:BruAb2_0122 hypothetical protein
YP_001372749.1	TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bmb:BruAb2_0121 flagellar motor switch protein FliN, hypothetical
YP_001372750.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_001372751.1	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export
YP_001372752.1	KEGG: bms:BRA0120 hypothetical protein
YP_001372753.1	PFAM: regulatory protein LuxR; KEGG: bmb:BruAb2_0117 transcriptional regulator, LuxR family
YP_001372754.1	PFAM: regulatory protein TetR; KEGG: bmb:BruAb2_0116 transcriptional regulator, TetR family
YP_001372755.1	PFAM: secretion protein HlyD family protein; KEGG: bme:BMEII1118 multidrug resistance protein A
YP_001372756.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bms:BRA0116 drug resistance transporter, Bcr/CflA family
YP_001372757.1	PFAM: extracellular solute-binding protein family 1; KEGG: bmb:BruAb2_0113 ABC transporter, periplasmic substrate-binding protein
YP_001372759.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0112 spermidine/putrescine ABC transporter, permease protein, hypothetical
YP_001372760.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0113 spermidine/putrescine ABC transporter, permease protein, putative
YP_001372761.1	TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bme:BMEII1123 iron(III)-transport ATP-binding protein SfuC
YP_001372762.1	catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate
YP_001372763.1	PFAM: MOSC domain containing protein; KEGG: rpe:RPE_1637 MOSC domain containing protein
YP_001372764.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bme:BMEII1125 dimeric dihydrodiol dehydrogenase
YP_001372765.1	PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: bms:BRA0109 oxidoreductase, Gfo/Idh/MocA family
YP_001372766.1	PFAM: O-antigen polymerase; KEGG: bms:BRA0108 exopolysaccharide production protein, putative
YP_001372767.1	PFAM: glycosyl transferase family 2; KEGG: bme:BMEII1128 succinoglycan biosynthesis protein ExoM
YP_001372768.1	KEGG: bmb:BruAb2_0104 hypothetical protein
YP_001372769.1	TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: bms:BRA0104 glycosyl transferase, WecB/TagA/CpsF family
YP_001372770.1	KEGG: bmf:BAB2_0101 hypothetical protein
YP_001372771.1	KEGG: bms:BRA0243 hypothetical protein
YP_001372772.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: bms:BRA0101 polysaccharide accessory transport protein, putative
YP_001372773.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc02982 hypothetical protein
YP_001372774.1	PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bmb:BruAb2_0099 decarboxylase, ornithine/DAP/arginine decarboxylase family 2
YP_001372775.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
YP_001372776.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmb:BruAb2_0097 transcriptional regulator, LysR family
YP_001372777.1	PFAM: protein of unknown function DUF1007; KEGG: bms:BRA0097 hypothetical protein
YP_001372778.1	PFAM: high-affinity nickel-transporter; KEGG: bmb:BruAb2_0095 hypothetical protein
YP_001372779.1	KEGG: bmb:BruAb2_0092 hypothetical protein
YP_001372780.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bmb:BruAb2_0091 acetyltransferase, GNAT family
YP_001372781.1	TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; KEGG: bme:BMEII0003 molybdenum transport ATP-binding protein ModC
YP_001372782.1	part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE
YP_001372783.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bmb:BruAb2_0088 ModeA, molybdenum ABC transporter, periplasmic molybdenum-binding protein
YP_001372784.1	PFAM: Rhodanese domain protein; KEGG: bms:BRA0086 rhodanese family protein
YP_001372785.1	KEGG: bmf:BAB2_0084 hypothetical protein
YP_001372786.1	catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate
YP_001372787.1	PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: bms:BRA0083 hypothetical protein
YP_001372788.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bms:BRA0082 sigma-54 dependent DNA-binding response regulator
YP_001372789.1	TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: bmb:BruAb2_0081 PepF, oligoendopeptidase F
YP_001372790.1	catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine
YP_001372791.1	KEGG: bms:BRA0079 4-amino-4-deoxychorismate lyase
YP_001372792.1	PFAM: homospermidine synthase; KEGG: bmb:BruAb2_0078 homospermidine synthase
YP_001372794.1	KEGG: bmb:BruAb2_0077 lipoprotein Omp10
YP_001372795.1	protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic
YP_001372796.1	PFAM: band 7 protein; KEGG: bms:BRA0075 SPFH domain/band 7 family protein
YP_001372797.1	PFAM: protein of unknown function DUF107; KEGG: bms:BRA0074 hypothetical protein
YP_001372798.1	TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KEGG: bme:BMEII0021 polysialic acid capsule expression protein KpsF
YP_001372799.1	KEGG: bms:BRA0072 hypothetical protein
YP_001372800.1	TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: art:Arth_3529 gluconate transporter
YP_001372801.1	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bmb:BruAb2_0071 GalU, UTP--glucose-1-phosphate uridylyltransferase
YP_001372802.1	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bmb:BruAb2_0070 hypothetical transglycosylase
YP_001372803.1	PFAM: protein of unknown function DUF459; KEGG: bms:BRA0057 hypothetical protein
YP_001372804.1	PFAM: amino acid permease-associated region; KEGG: bmb:BruAb2_0056 amino acid permease family protein
YP_001372805.1	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
YP_001372806.1	PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bms:BRA0054 glutamate synthase, large subunit
YP_001372807.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bms:BRA0052 threonine aldolase, low-specificity, putative
YP_001372808.1	PFAM: heat shock protein Hsp20; KEGG: bmb:BruAb2_0051 IbpA, 16 kDa heat shock protein A
YP_001372809.1	KEGG: bms:BRA0048 hypothetical protein
YP_001372810.1	PFAM: alpha/beta hydrolase fold; KEGG: bmb:BruAb2_0046 hypothetical lysophospholipase L2
YP_001372811.1	TIGRFAM: histidinol-phosphate phosphatase, putative; PFAM: inositol monophosphatase; KEGG: bms:BRA0045 inositol monophosphatase family protein
YP_001372812.1	PFAM: N-formylglutamate amidohydrolase; KEGG: bmb:BruAb2_0044 hypothetical formiminoglutamase
YP_001372813.1	PFAM: response regulator receiver; KEGG: bmb:BruAb2_0043 response regulator
YP_001372814.1	TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: sme:SMb20088 hypothetical fusion protein
YP_001372816.1	KEGG: mes:Meso_2781 hypothetical protein
YP_001372818.1	KEGG: sme:SMb20236 hypothetical protein
YP_001372819.1	KEGG: sme:SMb20075 hypothetical protein
YP_001372820.1	KEGG: ret:RHE_PE00021 hypothetical protein
YP_001372822.1	KEGG: bam:Bamb_5608 hypothetical protein
YP_001372823.1	KEGG: nar:Saro_1698 hypothetical protein
YP_001372824.1	PFAM: protein of unknown function DUF892; KEGG: atc:AGR_L_1433 hypothetical protein
YP_001372825.1	KEGG: ppu:PP_2237 hypothetical protein
YP_001372826.1	KEGG: ppu:PP_2236 prolyl oligopeptidase family protein
YP_001372827.1	KEGG: sme:SMb20086 hypothetical protein
YP_001372828.1	KEGG: sme:SMb20087 hypothetical protein
YP_001372829.1	TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: mes:Meso_2840 phage SPO1 DNA polymerase-related protein
YP_001372830.1	KEGG: ret:RHE_CH02072 hypothetical protein
YP_001372831.1	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rsp:RSP_2681 sigma factor, RpoE
YP_001372832.1	KEGG: ret:RHE_PF00074 putative two-component response regulator protein
YP_001372833.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpb:RPB_1505 short-chain dehydrogenase/reductase SDR
YP_001372834.1	PFAM: protein of unknown function DUF296; KEGG: atu:Atu4141 hypothetical protein
YP_001372835.1	SMART: cyclic nucleotide-binding; KEGG: sme:SMa1948 hypothetical protein
YP_001372836.1	PFAM: cyclic nucleotide-binding; KEGG: sme:SMa1948 hypothetical protein
YP_001372838.1	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rsp:RSP_2681 sigma factor, RpoE
YP_001372839.1	PFAM: isochorismatase hydrolase; KEGG: mlo:mlr6855 hypothetical protein
YP_001372840.1	PFAM: HWE histidine kinase; KEGG: pde:Pden_1635 signal transduction histidine kinase
YP_001372841.1	PFAM: porin opacity type; porin; KEGG: bms:BR0971 outer membrane protein, putative
YP_001372842.1	KEGG: mes:Meso_2773 hypothetical protein
YP_001372843.1	TIGRFAM: Ku family containing protein; PFAM: Ku domain protein; KEGG: ret:RHE_CH00616 putative DNA helicase protein
YP_001372844.1	TIGRFAM: DNA ligase D; DNA ligase D 3'-phosphoesterase domain; DNA polymerase LigD polymerase domain; DNA polymerase LigD ligase region; PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: mes:Meso_1150 ATP dependent DNA ligase
YP_001372845.1	TIGRFAM: Ku family containing protein; PFAM: Ku domain protein; KEGG: mlo:mlr9623 hypothetical protein
YP_001372848.1	KEGG: eba:ebB19 hypothetical protein
YP_001372850.1	KEGG: mag:amb3705 hypothetical protein
YP_001372851.1	PFAM: phage integrase family protein; KEGG: mag:amb1630 hypothetical protein
YP_001372852.1	KEGG: nar:Saro_0262 hypothetical protein
YP_001372853.1	KEGG: ppu:PP_1576 immunity protein, putative
YP_001372854.1	PFAM: protein of unknown function DUF805; KEGG: sfr:Sfri_1774 protein of unknown function DUF805
YP_001372855.1	PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMc03278 putative transposase number 1 for insertion sequence ISRM28
YP_001372856.1	PFAM: IS66 Orf2 family protein; KEGG: sme:SMc03279 putative transposase number 2 for insertion sequence ISRM28
YP_001372857.1	PFAM: transposase IS66; KEGG: bms:BRA0556 IS66 family element, orf3, putative
YP_001372858.1	TIGRFAM: yecA family protein; KEGG: sme:SMc03284 hypothetical/unknown protein
YP_001372860.1	PFAM: helix-turn-helix domain protein; KEGG: bja:bsr0038 probable transcriptional regulator
YP_001372861.1	KEGG: nha:Nham_4057 hypothetical protein
YP_001372862.1	KEGG: cph:Cpha266_0637 hypothetical protein
YP_001372863.1	KEGG: eli:ELI_04185 phage integrase family protein
YP_001372864.1	PFAM: transposase IS3/IS911 family protein; KEGG: rle:pRL110144 putative transposon/insertion element protein
YP_001372865.1	PFAM: Integrase catalytic region; KEGG: rle:pRL70110 putative transposase related protein
YP_001372867.1	PFAM: formate/nitrite transporter; KEGG: csa:Csal_2513 putative transport
YP_001372868.1	KEGG: rle:pRL110328 hypothetical protein
YP_001372869.1	PFAM: phage integrase family protein; KEGG: mes:Meso_3806 phage integrase
YP_001372870.1	PFAM: ApbE family lipoprotein; KEGG: bms:BRA0280 nosX protein
YP_001372871.1	PFAM: NosL family protein; KEGG: bmb:BruAb2_0901 hypothetical protein disulfide isomerase NosL
YP_001372872.1	KEGG: bmb:BruAb2_0902 NosY, nitrous-oxide reductase, NosY component
YP_001372873.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmf:BAB2_0926 ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase
YP_001372874.1	PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: bmb:BruAb2_0904 NosD, copper ABC transporter, periplasmic copper-binding protein
YP_001372875.1	reduces nitrous oxide to nitrogen
YP_001372876.1	PFAM: FMN-binding domain protein; KEGG: bmb:BruAb2_0906 hypothetical transcriptional regulator NosR
YP_001372877.1	PFAM: DSBA oxidoreductase; KEGG: rle:pRL100231 putative thioredoxin
YP_001372878.1	PFAM: extracellular solute-binding protein family 3; KEGG: rle:pRL100229 putative substrate-binding ABC transport protein
YP_001372879.1	PFAM: extracellular solute-binding protein family 3; KEGG: ret:RHE_PC00008 probable amino acid ABC transporter, substrate-binding protein
YP_001372880.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PC00007 probable amino acid ABC transporter, ATP-binding protein
YP_001372881.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rle:pRL100226 putative acetyltransferase
YP_001372882.1	TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rle:pRL100225 putative amidohydrolase
YP_001372883.1	KEGG: rle:pRL100224 putative nitrilotriacetate monooxygenase component
YP_001372885.1	TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: ret:RHE_CH03364 hypothetical protein
YP_001372886.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: atc:AGR_L_2798 hypothetical protein
YP_001372887.1	PFAM: luciferase family protein; KEGG: atc:AGR_L_2754 hypothetical protein
YP_001372888.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rle:pRL100226 putative acetyltransferase
YP_001372889.1	PFAM: luciferase family protein; KEGG: rle:pRL100223 hypothetical protein
YP_001372890.1	KEGG: syd:Syncc9605_1067 hypothetical protein
YP_001372891.1	KEGG: ttj:TTHA0873 hypothetical protein
YP_001372892.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: dge:Dgeo_0393 mandelate racemase/muconate lactonizing enzyme-like protein
YP_001372893.1	PFAM: uncharacterised conserved protein UCP012702; MlrC domain protein; KEGG: bxe:Bxe_B2560 hypothetical protein
YP_001372894.1	PFAM: extracellular solute-binding protein family 3; KEGG: sme:SMb20706 putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor
YP_001372895.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_2456 transcriptional regulator, LysR family
YP_001372896.1	PFAM: Dak phosphatase; KEGG: tte:TTE1996 dihydroxyacetone kinase
YP_001372897.1	PFAM: Dak kinase; KEGG: nca:Noca_3316 glycerone kinase
YP_001372898.1	PFAM: inner-membrane translocator; KEGG: sme:SMb20318 putative sugar ABC transporter permease protein
YP_001372899.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_4329 ABC transporter related
YP_001372900.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20316 putative ABC transporter periplasmic sugar-binding protein
YP_001372901.1	PFAM: inner-membrane translocator; KEGG: rru:Rru_A1335 inner-membrane translocator
YP_001372902.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: lmo:lmo1030 hypothetical protein
YP_001372903.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: pau:PA14_05230 probable cystathionine gamma-lyase
YP_001372904.1	KEGG: bms:BRA0252 hypothetical protein
YP_001372905.1	KEGG: bms:BRA0253 hypothetical protein
YP_001372906.1	KEGG: bmb:BruAb2_0925 hypothetical protein
YP_001372907.1	PFAM: protein of unknown function DUF59; KEGG: bmb:BruAb2_0924 hypothetical protein
YP_001372908.1	TIGRFAM: nitrite reductase, copper-containing; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: bmb:BruAb2_0919 copper-containing nitrite reductase
YP_001372909.1	PFAM: protein of unknown function DUF323; KEGG: bmb:BruAb2_0918 NirV protein, hypothetical
YP_001372910.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bms:BRA0262 transcriptional regulator, Crp/Fnr family
YP_001372911.1	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: bmb:BruAb2_0935 hypothetical protein
YP_001372912.1	KEGG: bmb:BruAb2_0934 hypothetical protein
YP_001372913.1	PFAM: cytochrome c oxidase subunit III; KEGG: bms:BRA0246 cytochrome c oxidase, subunit III
YP_001372914.1	KEGG: bmb:BruAb2_0932 NorF protein
YP_001372915.1	PFAM: cytochrome c class I; KEGG: sme:SMa1276 NorC nitric oxide reductase
YP_001372916.1	PFAM: cytochrome c oxidase subunit I; KEGG: bme:BMEII0998 nitric-oxide reductase subunit B
YP_001372917.1	PFAM: ATPase associated with various cellular activities AAA_5; CbbQ/NirQ/NorQ domain protein; KEGG: bmb:BruAb2_0929 CbbQ/NirQ/NorQ/GpvN family protein
YP_001372918.1	PFAM: von Willebrand factor type A; KEGG: bmb:BruAb2_0928 NorD protein
YP_001372919.1	PFAM: aldehyde dehydrogenase; KEGG: sit:TM1040_1597 succinate-semialdehyde dehydrogenase (NAD(P)+)
YP_001372920.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bpe:BP0300 putative esterase
YP_001372921.1	KEGG: nfa:nfa52190 putative dioxygenase
YP_001372922.1	PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: nfa:nfa52200 putative monooxygenase
YP_001372923.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sil:SPO2879 transcriptional regulator, LysR family
YP_001372924.1	PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_4211 extracellular ligand-binding receptor
YP_001372925.1	PFAM: aspartate dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: csa:Csal_0141 aspartate dehydrogenase
YP_001372926.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr1067 ABC transporter ATP-binding protein
YP_001372927.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr1066 ABC transporter ATP-binding protein
YP_001372928.1	PFAM: inner-membrane translocator; KEGG: vei:Veis_4209 inner-membrane translocator
YP_001372929.1	PFAM: inner-membrane translocator; KEGG: sit:TM1040_2236 inner-membrane translocator
YP_001372930.1	KEGG: vei:Veis_4211 extracellular ligand-binding receptor
YP_001372931.1	catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde in the final enzymatic step of quinolinate biosynthesis
YP_001372932.1	PFAM: dihydrodipicolinate synthetase; KEGG: sit:TM1040_1594 dihydrodipicolinate synthetase
YP_001372933.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0975 transcriptional regulator, LysR family
YP_001372934.1	PFAM: extracellular solute-binding protein family 5; KEGG: rle:RL0778 putative dipeptide binding component of ABC transporter
YP_001372935.1	catalyzes the release of the N-terminal amino acid from a tripeptide
YP_001372936.1	TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: mlo:mlr5711 gamma-glutamyltranspeptidase
YP_001372937.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sme:SMa0112 hypothetical protein
YP_001372938.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bms:BRA0550 transcriptional regulator, AraC family
YP_001372939.1	KEGG: bms:BRA0549 hypothetical protein
YP_001372940.1	PFAM: protein of unknown function DUF995; KEGG: bmb:BruAb2_0674 hypothetical protein
YP_001372941.1	KEGG: bmb:BruAb2_0675 endoglucanase family protein
YP_001372942.1	PFAM: protein of unknown function DUF995; KEGG: bmb:BruAb2_0676 hypothetical protein
YP_001372943.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: bmb:BruAb2_0677 Ugd, UDP-glucose 6-dehydrogenase
YP_001372944.1	KEGG: bmb:BruAb2_0678 glycosyl transferase, group 2 family protein
YP_001372945.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bmb:BruAb2_0679 GalE-2, UDP-glucose 4-epimerase
YP_001372946.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: bms:BRA0542 NAD-dependent epimerase/dehydratase family protein
YP_001372947.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bmb:BruAb2_0763 transcriptional regulator, GntR family
YP_001372948.1	PFAM: Asp/Glu racemase; KEGG: bja:blr5577 hydantoin Racemase
YP_001372949.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rde:RD1_0859 branched-chain amino acid ABC transporter, ATP-binding protein
YP_001372950.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sil:SPOA0297 branched-chain amino acid ABC transporter, ATP-binding protein
YP_001372951.1	PFAM: inner-membrane translocator; KEGG: rde:RD1_0856 branched-chain amino acid ABC transporter, permease protein
YP_001372952.1	PFAM: inner-membrane translocator; KEGG: sil:SPOA0299 branched-chain amino acid ABC transporter, permease protein
YP_001372953.1	KEGG: rde:RD1_0854 branched-chain amino acid ABC transporter, periplasmic substrate-binding protein
YP_001372954.1	KEGG: nha:Nham_4172 ISSpo6, transposase orf A
YP_001372955.1	AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate
YP_001372956.1	PFAM: regulatory protein TetR; KEGG: sme:SMb20033 hypothetical transcriptional regulator protein
YP_001372957.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; Xylose isomerase domain protein TIM barrel; KEGG: ret:RHE_PC00215 putative 4-hydroxyphenylpyruvate dioxygenase protein
YP_001372958.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sme:SMb20036 putative ABC transporter periplasmic solute-binding protein
YP_001372959.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ret:RHE_PC00212 probable C4-dicarboxylate transport system, permease protein
YP_001372960.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sme:SMb20034 putative ABC transporter integral membrane protein
YP_001372961.1	PFAM: protein of unknown function DUF922; KEGG: bms:BRA0011 hypothetical protein
YP_001372962.1	PFAM: extracellular solute-binding protein family 1; KEGG: pol:Bpro_3941 extracellular solute-binding protein, family 1
YP_001372963.1	PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_3942 FAD dependent oxidoreductase
YP_001372964.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pol:Bpro_3943 BFD-like (2Fe-2S)-binding region
YP_001372965.1	KEGG: pol:Bpro_3944 hypothetical protein
YP_001372966.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3945 binding-protein-dependent transport systems inner membrane component
YP_001372967.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3946 binding-protein-dependent transport systems inner membrane component
YP_001372968.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_3947 ABC transporter related
YP_001372969.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pol:Bpro_3948 transcriptional regulator, IclR family
YP_001372970.1	PFAM: basic membrane lipoprotein; KEGG: bms:BRA0010 lipoprotein, Bmp family
YP_001372971.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0009 ABC transporter, ATP-binding protein
YP_001372972.1	PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0008 hypothetical ABC transporter, permease protein
YP_001372973.1	PFAM: inner-membrane translocator; KEGG: bms:BRA0007 ABC transporter, permease protein
YP_001372974.1	PFAM: ADP-ribosylation/Crystallin J1; KEGG: sma:SAV1919 hypothetical protein
YP_001372975.1	PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: bms:BRA0006 inosine-uridine preferring nucleoside hydrolase
YP_001372976.1	TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: bms:BRA0005 ribokinase, putative
YP_001372977.1	KEGG: sme:SMc00620 hypothetical signal peptide protein
YP_001372978.1	PFAM: protein of unknown function DUF839; KEGG: mlo:mll4564 hypothetical protein
YP_001372980.1	PFAM: major facilitator superfamily MFS_1; KEGG: rme:Rmet_2369 major facilitator superfamily MFS_1
YP_001372981.1	PFAM: protein of unknown function DUF105; KEGG: rru:Rru_A0492 hypothetical protein
YP_001372983.1	PFAM: replication protein C; KEGG: bmb:BruAb2_0001 RepC, replication initiation protein RepC
YP_001372984.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: bmb:BruAb2_1139 RepB, replication protein RepB
YP_001372985.1	PFAM: regulatory protein MerR; Cobyrinic acid ac-diamide synthase; KEGG: bmb:BruAb2_1138 RepA, replication protein RepA
YP_001372986.1	KEGG: rle:pRL70083 putative transposase
YP_001372987.1	PFAM: response regulator receiver; GAF domain protein; HWE histidine kinase; PAS fold-2 domain protein; KEGG: rpa:RPA0990 bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB5
YP_001372988.1	KEGG: rle:pRL70083 putative transposase
YP_001372989.1	KEGG: sal:Sala_0414 hypothetical protein
YP_001372990.1	PFAM: heat shock protein Hsp20; KEGG: sal:Sala_0389 heat shock protein HSP20
YP_001372991.1	PFAM: heat shock protein Hsp20; KEGG: mlo:mlr4721 small heat shock protein (class I)
YP_001372992.1	PFAM: heat shock protein Hsp20; KEGG: sal:Sala_0391 heat shock protein HSP20
YP_001372993.1	PFAM: regulatory protein MarR; KEGG: rsp:RSP_2236 transcriptional regulator, MarR family
YP_001372994.1	KEGG: pde:Pden_4825 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001372995.1	PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: mfa:Mfla_1170 ATPase AAA-2
YP_001372996.1	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mfa:Mfla_1162 hypothetical protein
YP_001372997.1	KEGG: mfa:Mfla_1163 hypothetical protein
YP_001372998.1	KEGG: sal:Sala_0411 hypothetical protein
YP_001372999.1	PFAM: ETC complex I subunit conserved region; KEGG: sal:Sala_0412 hypothetical protein
YP_001373000.1	PFAM: Integrase catalytic region; KEGG: atc:AGR_L_547 hypothetical protein
YP_001373001.1	KEGG: mfa:Mfla_1165 hypothetical protein
YP_001373002.1	KEGG: mfa:Mfla_1164 hypothetical protein
YP_001373003.1	KEGG: pde:Pden_0077 transposase
YP_001373004.1	KEGG: rxy:Rxyl_0678 protein of unknown function DUF114
YP_001373005.1	KEGG: nha:Nham_4013 ISSpo6, transposase OrfB
YP_001373006.1	KEGG: sil:SPO2406 ISSpo6, transposase orf A
YP_001373007.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: eba:ebA4178 putative thioredoxin
YP_001373008.1	PFAM: sodium/hydrogen exchanger; KEGG: pna:Pnap_4109 sodium/hydrogen exchanger
YP_001373009.1	SMART: extracellular solute-binding protein family 3; KEGG: sme:SMc00676 putative amino acid-binding periplasmic signal peptide protein
YP_001373010.1	PFAM: inner-membrane translocator; KEGG: sil:SPO1832 branched-chain amino acid ABC transporter, permease protein
YP_001373011.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: swo:Swol_2552 branched-chain amino acid ABC transporter (ATP-binding protein)
YP_001373012.1	PFAM: Extracellular ligand-binding receptor; KEGG: rru:Rru_A3728 extracellular ligand-binding receptor
YP_001373013.1	PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_1836 ABC transporter related
YP_001373014.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pau:PA14_72650 putative transcriptional regulator
YP_001373015.1	PFAM: isochorismatase hydrolase; KEGG: pfo:Pfl_2058 isochorismatase hydrolase
YP_001373016.1	PFAM: glutamine synthetase catalytic region; KEGG: pae:PA5508 probable glutamine synthetase
YP_001373017.1	PFAM: N-formylglutamate amidohydrolase; KEGG: xom:XOO_3440 hypothetical protein
YP_001373018.1	PFAM: aminotransferase class-III; KEGG: sme:SMc02413 putative aminotransferase protein
YP_001373019.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rru:Rru_A3442 transposase IS116/IS110/IS902
YP_001373020.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: sfl:SF2976 reverse transcriptase-like protein
YP_001373021.1	KEGG: mes:Meso_4375 integrase, catalytic region
YP_001373022.1	PFAM: transposase IS3/IS911 family protein; KEGG: mes:Meso_4376 transposase IS3/IS911
YP_001373023.1	TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Pertactin; Autotransporter beta- domain protein; KEGG: atc:AGR_pAT_511 hypothetical protein
YP_001373025.1	PFAM: Integrase catalytic region; KEGG: sma:SAV115 putative IS6 family transposase
YP_001373026.1	catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine
YP_001373027.1	PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bms:BR1957 arginase family protein
YP_001373028.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_CH01895 general L-amino acid ABC transporter, ATP-binding protein
YP_001373029.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pna:Pnap_4063 polar amino acid ABC transporter, inner membrane subunit
YP_001373030.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1502 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
YP_001373031.1	PFAM: MmgE/PrpD family protein; KEGG: ppr:PBPRB0047 hypothetical protein
YP_001373032.1	PFAM: extracellular solute-binding protein family 3; KEGG: ret:RHE_PF00162 probable amino acid ABC transporter, substrate-binding protein
YP_001373033.1	PFAM: Endoribonuclease L-PSP; KEGG: aci:ACIAD3493 hypothetical protein
YP_001373034.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS02130 putative transcriptional regulator transcription regulator protein
YP_001373035.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: pde:Pden_0464 transposase IS116/IS110/IS902 family protein
YP_001373036.1	KEGG: rle:pRL70083 putative transposase
YP_001373037.1	KEGG: bmb:BruAb1_1835 IS2020 transposase
YP_001373038.1	KEGG: rle:pRL100469 hypothetical protein
YP_001373039.1	KEGG: rle:pRL100020 hypothetical protein
YP_001373040.1	PFAM: phage integrase family protein; KEGG: atc:AGR_pAT_22 hypothetical protein
YP_001373041.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: eca:ECA3458 hypothetical protein
YP_001373042.1	KEGG: aav:Aave_0524 hypothetical protein
YP_001373043.1	KEGG: nmu:Nmul_A2605 hypothetical protein
YP_001373044.1	PFAM: transposase IS3/IS911 family protein; KEGG: rle:pRL110144 putative transposon/insertion element protein
YP_001373045.1	PFAM: Integrase catalytic region; KEGG: rle:pRL70110 putative transposase related protein
YP_001373047.1	KEGG: bme:BMEII0652 hypothetical protein
YP_001373048.1	PFAM: regulatory protein MerR; Cobyrinic acid ac-diamide synthase; KEGG: sme:SMa2395 RepA2 replication protein
YP_001373049.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: sme:SMa2393 RepB2 replication protein
YP_001373050.1	PFAM: replication protein C; KEGG: mes:Meso_4585 replication protein C
YP_001373051.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rle:pRL120765 putative cold shock protein
YP_001373053.1	KEGG: nha:Nham_4013 ISSpo6, transposase OrfB
YP_001373054.1	KEGG: sil:SPO2406 ISSpo6, transposase orf A
YP_001373055.1	PFAM: replication protein C; KEGG: rle:pRL90003 putative replication protein RepC
YP_001373058.1	KEGG: sme:SMc02709 hypothetical/unknown protein
YP_001373059.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pca:Pcar_1335 maturase-related protein
YP_001373060.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: sme:SMc02710 putative cell filamentation protein
YP_001373061.1	PFAM: domain of unknown function DUF1738; KEGG: nha:Nham_0574 antirestriction protein
YP_001373062.1	TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: sme:SMc04436 RelE protein
YP_001373063.1	TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: psb:Psyr_3832 prevent-host-death protein
YP_001373064.1	PFAM: helix-turn-helix domain protein; KEGG: mes:Meso_4162 hypothetical protein
YP_001373066.1	KEGG: mes:Meso_4163 hypothetical protein
YP_001373067.1	KEGG: mes:Meso_4164 hypothetical protein
YP_001373068.1	PFAM: mobilisation protein; KEGG: mes:Meso_4165 hypothetical protein
YP_001373069.1	PFAM: Relaxase/mobilization nuclease family protein; KEGG: mes:Meso_4166 hypothetical protein
YP_001373070.1	PFAM: TRAG family protein; KEGG: mes:Meso_4169 TraG protein
YP_001373071.1	TIGRFAM: P-type DNA transfer ATPase VirB11; PFAM: type II secretion system protein E; KEGG: mes:Meso_4170 type II secretion system protein E
YP_001373072.1	PFAM: conjugation TrbI family protein; KEGG: mes:Meso_4171 conjugation TrbI-like protein
YP_001373073.1	PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: mes:Meso_4172 conjugal transfer protein TrbG/VirB9/CagX
YP_001373074.1	PFAM: VirB8 family protein; KEGG: mes:Meso_4173 VirB8
YP_001373075.1	PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: mes:Meso_4174 TrbL/VirB6 plasmid conjugal transfer protein
YP_001373076.1	KEGG: mes:Meso_4175 conjugal transfer protein
YP_001373077.1	PFAM: Lytic transglycosylase catalytic; KEGG: mes:Meso_4176 lytic transglycosylase, catalytic
YP_001373078.1	TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE TrbE VirB component of type IV transporter system; KEGG: mes:Meso_4177 type IV secretion/conjugal transfer ATPase, VirB4 family
YP_001373079.1	PFAM: type IV secretory pathway VirB3 family protein; KEGG: mes:Meso_4178 type IV secretory pathway, VirB3-like
YP_001373080.1	PFAM: VIRB2 type IV secretion fmaily protein; KEGG: mes:Meso_4179 VirB2 type IV secretion
YP_001373081.1	PFAM: Lytic transglycosylase catalytic; KEGG: mes:Meso_4180 lytic transglycosylase, catalytic
YP_001373082.1	KEGG: mes:Meso_4181 hypothetical protein
YP_001373083.1	KEGG: mes:Meso_4182 succinoglycan biosynthesis protein ExoI-like
YP_001373084.1	PFAM: nuclease (SNase domain protein); KEGG: mes:Meso_4183 nuclease (SNase-like)
YP_001373086.1	KEGG: mes:Meso_4184 hypothetical protein
YP_001373089.1	KEGG: rle:pRL80130 putative transmembrane protein
YP_001373090.1	KEGG: rle:pRL80128 hypothetical protein
YP_001373091.1	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: sme:SMc02079 putative outer membrane protein
YP_001373093.1	PFAM: regulatory protein TetR; KEGG: rpb:RPB_3101 transcriptional regulator, TetR family
YP_001373094.1	PFAM: NMT1/THI5 like domain protein; KEGG: rpb:RPB_3091 hypothetical protein
YP_001373095.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_3092 ABC transporter related
YP_001373096.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_3093 binding-protein-dependent transport systems inner membrane component
YP_001373097.1	PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: bxe:Bxe_B0371 5-oxoprolinase (ATP-hydrolyzing)
YP_001373098.1	PFAM: Hydantoinase B/oxoprolinase; KEGG: bxe:Bxe_B0372 5-oxoprolinase (ATP-hydrolyzing)
YP_001373099.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: tfu:Tfu_1719 hypothetical protein
YP_001373100.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tth:TTC0795 amino acid ABC transporter, ATP-binding protein
YP_001373101.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2969 ABC transporter permease protein
YP_001373102.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2969 ABC transporter permease protein
YP_001373103.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbr:BB4075 putative oxidoreductase
YP_001373104.1	SMART: extracellular solute-binding protein family 3; KEGG: bja:blr8117 ABC transporter substrate-binding protein
YP_001373105.1	PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: bxe:Bxe_A4479 dihydroxy-acid dehydratase
YP_001373106.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rha:RHA1_ro08853 transcriptional regulator, GntR family
YP_001373107.1	PFAM: MOFRL domain protein; KEGG: pfu:PF0024 putative glycerate kinase
YP_001373108.1	PFAM: enolase; KEGG: mav:MAV_3957 enolase
YP_001373109.1	catalyzes the formation of L-proline from L-ornithine
YP_001373110.1	KEGG: ret:RHE_PF00403 hypothetical protein
YP_001373111.1	PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: rsp:RSP_0398 dehydrogenase
YP_001373112.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: rfr:Rfer_1809 4-oxalocrotonate tautomerase family enzyme
YP_001373113.1	biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate
YP_001373114.1	PFAM: Integrase catalytic region; KEGG: rle:pRL90171 putative transposase for insertion sequence element
YP_001373115.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pen:PSEEN2260 diguanylate cyclase (GGDEF) domain
YP_001373116.1	PFAM: helix-turn-helix domain protein; KEGG: mes:Meso_4238 transcriptional regulator, XRE family
YP_001373118.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: ret:RHE_CH02002 putative plasmid stabilization protein
YP_001373119.1	PFAM: Rv0623 family protein transcription factor; KEGG: sme:SMc02716 conserved hypothetical protein
YP_001373120.1	PFAM: PilT protein domain protein; KEGG: sme:SMc02987 hypothetical protein
YP_001373121.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rle:RL4424 putative acetyltransferase
YP_001373122.1	PFAM: Resolvase domain; KEGG: mlo:mlr9024 resolvase / integrase
YP_001373123.1	PFAM: Integrase catalytic region; KEGG: atc:AGR_L_547 hypothetical protein
YP_001373124.1	PFAM: transposase IS3/IS911 family protein; KEGG: atc:AGR_L_545 hypothetical protein
YP_001373125.1	PFAM: aminotransferase class IV; KEGG: rsp:RSP_1768 aminotransferase class IV , putative D-alanine aminotransferase
YP_001373126.1	KEGG: syn:sll0854 hypothetical protein
YP_001373127.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: mpt:Mpe_A3117 ABC type ATPase
YP_001373128.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rxy:Rxyl_0869 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein
YP_001373129.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04035 putative dipeptide transport system permease ABC transporter protein
YP_001373130.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PB00091 probable dipeptide ABC transporter, permease protein
YP_001373131.1	PFAM: extracellular solute-binding protein family 5; KEGG: rsp:RSP_3248 ABC peptide transporter, periplasmic binding protein
YP_001373132.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rsp:RSP_3464 transcriptional regulator, LysR-family
YP_001373133.1	KEGG: rle:pRL70083 putative transposase
YP_001373134.1	PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMc03278 putative transposase number 1 for insertion sequence ISRM28
YP_001373135.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: nha:Nham_1949 heavy metal translocating P-type ATPase
YP_001373136.1	PFAM: transposase IS3/IS911 family protein; KEGG: eli:ELI_10665 ISCc3, transposase OrfA
YP_001373137.1	KEGG: nwi:Nwi_3106 helix-turn-helix, fis-type
YP_001373138.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: sfl:SF2976 reverse transcriptase-like protein
YP_001373139.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: gox:GOX1323 transposase
YP_001373140.1	TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein MerR; KEGG: mca:MCA2639 hypothetical protein
YP_001373141.1	in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever
YP_001373142.1	KEGG: rle:pRL70083 putative transposase
YP_001373143.1	TIGRFAM: DNA-directed RNA polymerase, omega subunit
YP_001373144.1	PFAM: ETC complex I subunit conserved region; KEGG: bja:blr5222 hypothetical protein
YP_001373145.1	PFAM: heat shock protein Hsp20; KEGG: ret:RHE_CH01245 probable molecular chaperone small heat shock protein, HSP20 family
YP_001373146.1	PFAM: heat shock protein Hsp20; KEGG: ret:RHE_CH01244 probable molecular chaperone small heat shock protein, HSP20 family
YP_001373147.1	PFAM: replication protein C; KEGG: rle:pRL70003 putative replication protein
YP_001373149.1	KEGG: sme:SMa0806 probable SyrB-like regulator
YP_001373150.1	KEGG: sme:SMa1697 hypothetical protein
YP_001373152.1	KEGG: ret:RHE_CH02007 hypothetical protein
YP_001373153.1	KEGG: ret:RHE_PA00139 hypothetical protein
YP_001373154.1	PFAM: protein of unknown function DUF1419; KEGG: ret:RHE_PA00140 hypothetical protein
YP_001373155.1	KEGG: sal:Sala_2655 hypothetical protein
YP_001373156.1	KEGG: sal:Sala_2655 hypothetical protein
YP_001373159.1	KEGG: mes:Meso_4313 hypothetical protein
YP_001373160.1	PFAM: helicase domain protein; N-6 DNA methylase; SMART: DEAD-like helicases; KEGG: ret:RHE_PA00141 probable DNA methylase
YP_001373161.1	TIGRFAM: prevent-host-death family protein; KEGG: rle:pRL70014 hypothetical protein
YP_001373162.1	KEGG: rle:pRL100298 hypothetical protein
YP_001373163.1	PFAM: protein of unknown function DUF88; KEGG: rpa:RPA3960 hypothetical protein
YP_001373164.1	PFAM: helix-turn-helix HxlR type; KEGG: bte:BTH_I1437 transcriptional regulator family protein
YP_001373165.1	TIGRFAM: prevent-host-death family protein; KEGG: ret:RHE_PB00086 hypothetical protein
YP_001373166.1	PFAM: PilT protein domain protein; KEGG: reh:H16_A3381 plasmid stability protein StbB
YP_001373167.1	ParB family
YP_001373168.1	KEGG: ret:RHE_PA00144 hypothetical protein
YP_001373169.1	KEGG: mes:Meso_4318 hypothetical protein
YP_001373170.1	KEGG: rle:pRL80107 hypothetical protein
YP_001373171.1	KEGG: nha:Nham_4481 hypothetical protein
YP_001373172.1	KEGG: atc:AGR_pTi_204 hypothetical protein
YP_001373173.1	KEGG: rle:pRL120358 hypothetical protein
YP_001373174.1	PFAM: domain of unknown function DUF1738; KEGG: rle:pRL80111 putative ArdC antirestriction protein
YP_001373175.1	KEGG: mes:Meso_4589 hypothetical protein
YP_001373176.1	KEGG: mes:Meso_4323 hypothetical protein
YP_001373177.1	PFAM: protein of unknown function DUF736; KEGG: atc:AGR_pTi_209 hypothetical protein
YP_001373178.1	PFAM: histone family protein DNA-binding protein; KEGG: atc:AGR_pTi_222 DNA-binding protein HU
YP_001373179.1	KEGG: ret:RHE_PA00152 hypothetical protein
YP_001373180.1	PFAM: WGR domain protein; KEGG: rle:pRL70021 hypothetical protein
YP_001373181.1	PFAM: nuclease (SNase domain protein); KEGG: nha:Nham_4671 nuclease (SNase-like)
YP_001373184.1	PFAM: mobilisation protein; KEGG: mes:Meso_4165 hypothetical protein
YP_001373185.1	KEGG: mes:Meso_4166 hypothetical protein
YP_001373186.1	PFAM: Domain of unknown function DUF1814; KEGG: mes:Meso_4611 hypothetical protein
YP_001373187.1	KEGG: mes:Meso_4610 hypothetical protein
YP_001373188.1	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: atc:AGR_L_3461 probable transporter PA4289
YP_001373189.1	PFAM: transcriptional regulator PadR family protein; KEGG: ava:Ava_1225 transcriptional regulator, PadR-like family
YP_001373190.1	PFAM: protein of unknown function DUF81; KEGG: nmu:Nmul_A1650 protein of unknown function DUF81
YP_001373191.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mag:amb1828 protein-tyrosine-phosphatase
YP_001373192.1	PFAM: Resolvase domain; KEGG: ajs:Ajs_4249 resolvase, N-terminal domain
YP_001373193.1	PFAM: transposase Tn3 family protein; KEGG: mes:Meso_4554 transposase Tn3
YP_001373194.1	KEGG: bja:bll1685 putative transposase
YP_001373195.1	KEGG: atc:AGR_L_206 hypothetical protein
YP_001373196.1	KEGG: rle:RL1165 hypothetical protein
YP_001373197.1	KEGG: rle:RL1164 hypothetical protein
YP_001373198.1	PFAM: response regulator receiver; HWE histidine kinase; KEGG: mes:Meso_1944 signal transduction histidine kinase
YP_001373199.1	PFAM: CheB methylesterase; KEGG: aav:Aave_3994 CheB methylesterase
YP_001373200.1	PFAM: MCP methyltransferase CheR-type; KEGG: ajs:Ajs_0648 MCP methyltransferase, CheR-type
YP_001373201.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: aav:Aave_3996 multi-sensor hybrid histidine kinase
YP_001373202.1	PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMa2191 hypothetical protein
YP_001373203.1	PFAM: IS66 Orf2 family protein; KEGG: pde:Pden_0067 IS66 Orf2 family protein
YP_001373204.1	PFAM: transposase IS66; KEGG: sme:SMa2171 hypothetical protein
YP_001373205.1	KEGG: sme:SMa1608 hypothetical protein
YP_001373206.1	PFAM: Catalase domain protein; KEGG: rle:RL2024 putative catalase
YP_001373207.1	PFAM: protein of unknown function DUF892; KEGG: sme:SMc00371 hypothetical protein
YP_001373209.1	PFAM: protein of unknown function DUF159; KEGG: mlo:mll7390 hypothetical protein
YP_001373210.1	PFAM: transposase Tn3 family protein; KEGG: mes:Meso_4554 transposase Tn3
YP_001373211.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4422 ABC transporter permease protein
YP_001373212.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3895 binding-protein-dependent transport systems inner membrane component
YP_001373213.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sde:Sde_2031 conserved hypothetical ABC transporter ATP-binding protein in bcr 5'region
YP_001373214.1	PFAM: Integrase catalytic region; transposase IS3/IS911 family protein; KEGG: atc:AGR_pAT_508 hypothetical protein
YP_001373215.1	PFAM: Recombinase; KEGG: pde:Pden_0105 recombinase
YP_001373216.1	KEGG: dra:DRA0146 hypothetical protein
YP_001373217.1	KEGG: dra:DRA0144 hypothetical protein
YP_001373218.1	TIGRFAM: Dyp-type peroxidase family; KEGG: dra:DRA0145 peroxidase, putative
YP_001373219.1	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA
YP_001373220.1	PFAM: regulatory protein TetR; KEGG: rpc:RPC_2257 transcriptional regulator, TetR family
YP_001373221.1	in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever
YP_001373222.1	PFAM: ABC-2 type transporter; KEGG: rle:pRL110233 putative permease component of ABC transporter
YP_001373223.1	KEGG: rle:pRL110234 putative permease component of ABC transporter
YP_001373224.1	PFAM: secretion protein HlyD family protein; KEGG: rle:pRL110235 putative HlyD family protein
YP_001373225.1	PFAM: regulatory protein TetR; KEGG: rle:pRL90058 putative TetR family transcriptional regulator
YP_001373226.1	PFAM: sodium/glutamate symporter; KEGG: rpa:RPA2262 putative glutamate permease
YP_001373227.1	PFAM: transposase IS4 family protein; KEGG: gox:GOX2687 transposase (class II)
YP_001373229.1	KEGG: nar:Saro_2759 transposase orfA IS5 family element
YP_001373230.1	KEGG: mes:Meso_0540 hypothetical protein
YP_001373231.1	PFAM: chromosome segregation and condensation protein ScpB; KEGG: rle:pRL100016 putative segregation and condensation protein
YP_001373232.1	PFAM: protein of unknown function DUF1403; KEGG: rle:pRL100015 hypothetical protein
YP_001373233.1	PFAM: PilT protein domain protein; KEGG: nha:Nham_4577 PilT protein-like
YP_001373234.1	PFAM: phage integrase family protein; KEGG: rle:pRL100014 putative phage integrase
YP_001373235.1	PFAM: protein of unknown function DUF1275; KEGG: bam:Bamb_6551 protein of unknown function DUF1275
YP_001373236.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: atu:Atu3924 replication protein A
YP_001373237.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: rle:pRL70002 putative replication protein B
YP_001373238.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: rru:Rru_A0676 transposase IS116/IS110/IS902
YP_001373239.1	PFAM: transposase IS4 family protein; KEGG: nar:Saro_2758 transposase, IS4
YP_001373240.1	KEGG: nar:Saro_2759 transposase orfA IS5 family element
YP_001373241.1	KEGG: gox:GOX2729 transposase
YP_001373242.1	PFAM: transposase IS3/IS911 family protein; KEGG: atu:Atu4891 IS 426 transposase
YP_001373243.1	PFAM: Integrase catalytic region; KEGG: atc:AGR_L_551 hypothetical protein
YP_001373244.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bms:BR0654 transcriptional regulator, Crp/Fnr family
YP_001373245.1	PFAM: C4-dicarboxylate anaerobic carrier; KEGG: mes:Meso_2242 C4-dicarboxylate anaerobic carrier
YP_001373246.1	catalyzes the degradation of arginine to citruline and ammonia
YP_001373247.1	TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: mes:Meso_2240 ornithine carbamoyltransferase
YP_001373248.1	reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP
YP_001373249.1	KEGG: nar:Saro_2759 transposase orfA IS5 family element
YP_001373250.1	PFAM: transposase IS4 family protein; KEGG: nar:Saro_2758 transposase, IS4
YP_001373251.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: rru:Rru_A0676 transposase IS116/IS110/IS902
YP_001373252.1	KEGG: ret:RHE_CH04032 probable ABC transporter protein, ATP-binding and permease domains
YP_001373253.1	Enables the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation
YP_001373254.1	PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: bms:BRA0385 xylulose-5-phosphate/fructose-6-phosphate phosphoketolase
YP_001373255.1	PFAM: transposase IS4 family protein; KEGG: bte:BTH_II0087 transposase
YP_001373256.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: nha:Nham_1949 heavy metal translocating P-type ATPase
YP_001373257.1	PFAM: protein of unknown function DUF125 transmembrane; KEGG: rle:RL2270 putative nodulin-related transmembrane protein
YP_001373258.1	PFAM: beta-lactamase domain protein; protein of unknown function DUF442; KEGG: rle:RL1134 hypothetical protein
YP_001373259.1	PFAM: regulatory protein ArsR; KEGG: rle:RL1133 putative HTH family transcriptional regulator
YP_001373260.1	PFAM: protein of unknown function DUF81; KEGG: rle:RL1131 putative transmembrane protein
YP_001373261.1	KEGG: gox:GOX2729 transposase
YP_001373262.1	PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: mes:Meso_4555 resolvase-like
YP_001373263.1	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: atc:AGR_L_3461 probable transporter PA4289
YP_001373264.1	PFAM: transcriptional regulator PadR family protein; KEGG: ava:Ava_1225 transcriptional regulator, PadR-like family
YP_001373265.1	PFAM: protein of unknown function DUF81; KEGG: nmu:Nmul_A1650 protein of unknown function DUF81
YP_001373266.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mag:amb1828 protein-tyrosine-phosphatase
YP_001373267.1	PFAM: Resolvase domain; KEGG: ajs:Ajs_4249 resolvase, N-terminal domain
YP_001373268.1	PFAM: transposase Tn3 family protein; KEGG: mes:Meso_4554 transposase Tn3
YP_001373270.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mes:Meso_4583 cobyrinic acid a,c-diamide synthase
YP_001373271.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: mes:Meso_4584 ParB-like partition proteins
YP_001373272.1	PFAM: replication protein C; KEGG: mlo:mll9351 replication protein C
YP_001373273.1	KEGG: ret:RHE_PF00431 hypothetical protein
YP_001373274.1	KEGG: bmb:BruAb2_0158 hypothetical protein
YP_001373275.1	PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: bmb:BruAb1_0261 hypothetical protein
YP_001373276.1	PFAM: plasmid maintenance system killer; KEGG: bja:bsl3012 putative proteic killer suppression protein
YP_001373277.1	TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: mes:Meso_0885 plasmid maintenance system antidote protein, XRE family
YP_001373282.1	PFAM: Integrase catalytic region; KEGG: rle:pRL70110 putative transposase related protein
YP_001373283.1	PFAM: transposase Tn3 family protein; KEGG: gox:GOX2645 transposase
YP_001373284.1	PFAM: Resolvase domain; KEGG: mlo:mlr9265 invertase/recombinase like protein
YP_001373285.1	PFAM: transposase IS66; KEGG: bms:BRA0556 IS66 family element, orf3, putative
YP_001373286.1	PFAM: IS66 Orf2 family protein; KEGG: sme:SMc03279 putative transposase number 2 for insertion sequence ISRM28
YP_001373287.1	PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMc03278 putative transposase number 1 for insertion sequence ISRM28
YP_001373288.1	KEGG: mlo:mll7725 putataive fimbrial chaperone protein
YP_001373289.1	PFAM: Spore coat U domain protein; KEGG: mlo:mll7726 similar to spore coat protein U precursor
YP_001373290.1	KEGG: sil:SPO2406 ISSpo6, transposase orf A
YP_001373291.1	PFAM: Endoribonuclease L-PSP; KEGG: sme:SMa2201 hypothetical protein
YP_001373292.1	PFAM: FAD dependent oxidoreductase; KEGG: sme:SMa2193 putative oxidoreductase
YP_001373293.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa2195 probable ABC transporter, ATP-binding protein
YP_001373294.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa2197 putative ABC transporter, permease
YP_001373295.1	PFAM: extracellular solute-binding protein family 3; KEGG: sme:SMa2199 putative ABC transporter, periplasmic solute-binding protein
YP_001373296.1	PFAM: aldehyde dehydrogenase; KEGG: pde:Pden_4941 betaine-aldehyde dehydrogenase
YP_001373297.1	PFAM: regulatory protein GntR HTH; regulatory protein DeoR; UbiC transcription regulator-associated domain protein; KEGG: pde:Pden_4940 histidine utilization repressor
YP_001373298.1	TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: sme:SMa2217 putative decarboxylase
YP_001373299.1	TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: sme:SMa2219 probable decarboxylase
YP_001373300.1	KEGG: sme:SMa2229 hypothetical protein
YP_001373301.1	PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: pde:Pden_4940 histidine utilization repressor
YP_001373302.1	KEGG: atc:AGR_L_216 hypothetical protein
YP_001373303.1	TIGRFAM: prevent-host-death family protein; KEGG: rle:RL3053 hypothetical protein
YP_001373304.1	PFAM: PilT protein domain protein; KEGG: rle:RL3054 hypothetical protein
YP_001373307.1	PFAM: replication protein C; KEGG: mlo:mll9351 replication protein C
YP_001373308.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: mes:Meso_4544 ParB-like partition proteins
YP_001373309.1	PFAM: regulatory protein MerR; Cobyrinic acid ac-diamide synthase; KEGG: atc:AGR_pAT_1 hypothetical protein
YP_001373313.1	PFAM: phage integrase family protein; KEGG: atc:AGR_pAT_22 hypothetical protein
YP_001373314.1	PFAM: PilT protein domain protein; KEGG: sme:SMc00900 hypothetical protein
YP_001373315.1	KEGG: nha:Nham_4574 hypothetical protein
YP_001373316.1	PFAM: protein of unknown function DUF1612; KEGG: atc:AGR_pAT_23 hypothetical protein
YP_001373317.1	KEGG: rde:RD1_0808 hypothetical protein
YP_001373318.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: atu:Atu4132 transcriptional regulator, AraC family
YP_001373319.1	TIGRFAM: outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; KEGG: bbr:BB0916 autotransporter
YP_001373320.1	KEGG: nwi:Nwi_2867 transposase IS3/IS911
YP_001373321.1	KEGG: mlo:mll6362 transposase
YP_001373322.1	KEGG: psb:Psyr_3724 hypothetical protein
YP_001373323.1	KEGG: psb:Psyr_3725 ATPas
YP_001373324.1	KEGG: rle:pRL120684 hypothetical protein
YP_001373326.1	PFAM: putative sugar-binding domain protein; KEGG: sme:SMb20619 putative regulatory protein
YP_001373327.1	PFAM: class II aldolase/adducin family protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mlo:mll7289 short chain dehydrogenase
YP_001373328.1	KEGG: sme:SMb20620 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor
YP_001373329.1	PFAM: inner-membrane translocator; KEGG: sme:SMb20621 putative sugar uptake ABC transporter permease protein
YP_001373330.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20622 putative sugar uptake ABC transporter ATP-binding protein
YP_001373331.1	phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway
YP_001373332.1	isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway
YP_001373333.1	PFAM: Transketolase domain protein; KEGG: msm:MSMEG_2165 transketolase, N-subunit
YP_001373334.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: msm:MSMEG_2166 transketoloase, C half
YP_001373335.1	PFAM: ribulose bisphosphate carboxylase large chain; KEGG: aeh:Mlg_1168 ribulose-bisphosphate carboxylase
YP_001373336.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sme:SMa1838 hypothetical protein
YP_001373337.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr2226 amino acid ABC transporter ATP-binding protein
YP_001373338.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr2225 amino acid ABC transporter permease protein
YP_001373339.1	PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: bja:blr2224 ABC transporter amino acid-binding protein
YP_001373340.1	PFAM: FAD dependent oxidoreductase; KEGG: sil:SPOA0380 hypothetical protein
YP_001373341.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: rfr:Rfer_0230 transcriptional regulator, XRE family with cupin sensor domain
YP_001373342.1	PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_0638 putative FAD dependent oxidoreductase protein
YP_001373343.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: aav:Aave_2183 protein of unknown function DUF861, cupin_3
YP_001373345.1	SMART: helix-turn-helix domain protein; KEGG: bja:blr0978 hypothetical protein
YP_001373346.1	TIGRFAM: LPXTG-motif cell wall anchor domain; PFAM: von Willebrand factor type A; Vault protein inter-alpha-trypsin domain protein; SMART: Vault protein inter-alpha-trypsin, metazoa; KEGG: bja:bll0977 hypothetical protein
YP_001373347.1	TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: bja:bll0976 sortase, putative
YP_001373348.1	KEGG: bur:Bcep18194_B0994 hypothetical protein
YP_001373349.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_3037 putative short-chain dehydrogenase/reductase
YP_001373350.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3038 ABC permidine/putrescine transporter, inner membrane subunit
YP_001373351.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3039 ABC permidine/putrescine transporter, inner membrane subunit
YP_001373352.1	PFAM: extracellular solute-binding protein family 1; KEGG: rsp:RSP_3040 ABC permidine/putrescine transporter, periplasmic substrate-binding protein
YP_001373353.1	TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3041 ABC permidine/putrescine transporter, ATPase subunit
YP_001373354.1	PFAM: regulatory protein LuxR; KEGG: rsp:RSP_3042 DMSO reductase regulatory protein DorX
YP_001373355.1	TIGRFAM: polymorphic outer membrane protein; outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat protein; PFAM: Pertactin; Autotransporter beta- domain protein; Haemagluttinin repeat-containing protein; KEGG: bms:BR2013 outer membrane autotransporter
YP_001373357.1	KEGG: yps:YPTB3789 possible bacterial Ig-like domain (group 1)
YP_001373358.1	TIGRFAM: outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat protein; PFAM: Polymorphic membrane protein Chlamydia; Pertactin; Autotransporter beta- domain protein; Haemagluttinin repeat-containing protein; KEGG: bms:BRA1148 outer membrane autotransporter
YP_001373360.1	TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: gox:GOX0528 putative iron-dependent peroxidase