-- dump date   	20140619_165239
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_003677960.1	COGs: COG0593 ATPase involved in DNA replication initiation; InterProIPR010921:IPR018312:IPR013317:IPR013159:IPR 003593:IPR001957:IPR020591; KEGG: tfu:Tfu_0001 chromosomal replication initiation protein; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; ATPase AAA; SPTR: C1YR93 Chromosomal replication initiator protein dnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA
YP_003677961.1	COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001; KEGG: tfu:Tfu_0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III beta chain; SPTR: C1YR92 DNA polymerase III subunit beta; TIGRFAM: DNA polymerase III subunit beta; PFAM: DNA polymerase III subunit beta, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III subunit beta, central domain; TIGRFAM: DNA polymerase III subunit beta
YP_003677962.1	COGs: COG1023 6-phosphogluconate dehydrogenase; InterProIPR004849:IPR016040:IPR002204:IPR006115:IPR 013328:IPR008927:IPR006114:IPR006184:IPR006183; KEGG: tfu:Tfu_0003 6-phosphogluconate dehydrogenase-like protein; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase domain protein; SPTR: C1YR91 6-phosphogluconate dehydrogenase, decarboxylating; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase, C-terminal domain; TIGRFAM: 6-phosphogluconate dehydrogenase (decarboxylating)
YP_003677963.1	COGs: COG1195 recombinational DNA repair ATPase (RecF pathway); InterPro IPR018078:IPR003395:IPR001238; KEGG: tfu:Tfu_0004 recombination protein F; PFAM: SMC domain protein; SPTR: C1YR90 DNA replication and repair protein recF; TIGRFAM: DNA replication and repair protein RecF; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein
YP_003677964.1	InterPro IPR007922; KEGG: tfu:Tfu_0005 hypothetical protein; PFAM: protein of unknown function DUF721; SPTR: C1YR90 DNA replication and repair protein recF; PFAM: protein of unknown function (DUF721)
YP_003677965.1	COGs: COG0187 type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR013760:IPR003594:IPR020568:IPR014721:IPR 013759:IPR018522:IPR013506:IPR006171:IPR002288:IPR001241:I PR011557:IPR000565; KEGG: tfu:Tfu_0006 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIsubunit alpha B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; SPTR: C1YR89 DNA gyrase subunit B; TIGRFAM: DNA gyrase subunit beta; PFAM: Toprim domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase subunit beta, carboxyl terminus; TIGRFAM: DNA gyrase subunit beta
YP_003677966.1	COGs: COG0188 type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterProIPR013760:IPR013758:IPR013757:IPR002205:IPR 006691:IPR005743; KEGG: tfu:Tfu_0007 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: C1YR88 DNA gyrase subunit A; TIGRFAM: DNA gyrase A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase subunit alpha
YP_003677967.1	KEGG: tfu:Tfu_0008 hypothetical protein; SPTR: C1YR87  uncharacterized protein; PFAM: transmembrane domain of unknown function (DUF3566)
YP_003677968.1	SPTR: C1YR86  uncharacterized protein
YP_003677969.1	SPTR: C1YR85  uncharacterized protein
YP_003677970.1	COGs: COG1653 ABC-type sugar transporter periplasmic component; InterPro IPR006059; KEGG: tfu:Tfu_0753  ABC transporter periplasmic substrate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: C1YR84 carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein
YP_003677971.1	InterPro IPR001254:IPR002035:IPR009003; KEGG: tfu:Tfu_0752 von Willebrand factor, type A; PFAM: peptidase S1 and S6 chymotrypsin/Hap; von Willebrand factor type A; SMART: von Willebrand factor type A; peptidase S1 and S6 chymotrypsin/Hap; SPTR: C1YR83 Uncharacterized protein containing a von Willebrand factor type A (VWA) domain; PFAM: Trypsin
YP_003677972.1	KEGG: sgr:SGR_6969 hypothetical protein; SPTR: C1YR82  uncharacterized protein
YP_003677974.1	InterPro IPR011701:IPR016196; KEGG: aau:AAur_2544 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YR81 Arabinose efflux permease family protein; PFAM: Sugar (and other) transporter; Major Facilitator Superfamily
YP_003677975.1	COGs: COG0028 thiamine pyrophosphate-requiring protein; InterPro IPR011766:IPR012001:IPR012000; KEGG: sen:SACE_5551 thiamine pyrophosphate protein; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; SPTR: C1YR80 thiamine pyrophosphate-dependent enzyme, carboligase or decarboxylase; PFAM: thiamine pyrophosphate enzyme, central domain; thiamine pyrophosphate enzyme, N-terminal TPP binding domain; thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_003677976.1	KEGG: rha:RHA1_ro03416 hypothetical protein; SPTR: C1YR79  uncharacterized protein
YP_003677977.1	KEGG: cpi:Cpin_6099 hypothetical protein; SPTR: C1YR78  uncharacterized protein
YP_003677978.1	COGs: COG0753 catalase; InterProIPR002226:IPR018028:IPR010582:IPR020835:IPR 011614; KEGG: sro:Sros_5497 catalase; PFAM: catalase related subgroup; catalase domain protein; PRIAM: catalase; SPTR: C1YR77 catalase; PFAM: catalase; catalase-related immune-responsive
YP_003677979.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR009010:IPR006657:IPR006656:IPR006963:IPR 006443; KEGG: sro:Sros_3728 formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; PRIAM: nitrate reductase; SPTR: C1YR76 formate dehydrogenase, subunit alpha; TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, subunit alpha, proteobacterial-type
YP_003677980.1	COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017900:IPR001450:IPR014603:IPR017896; KEGG: svi:Svir_19180 formate dehydrogenase subunit beta; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C1YR75 formate dehydrogenase beta subunit; PFAM: 4Fe-4S binding domain; TIGRFAM: formate dehydrogenase, beta subunit, Fe-S containing
YP_003677981.1	InterPro IPR005614; KEGG: kra:Krad_1604 polysulphide reductase NrfD; PFAM: polysulphide reductase NrfD; SPTR: C1YR74 formate-dependent nitrite reductase, membrane component; PFAM: polysulphide reductase, NrfD
YP_003677982.1	COGs: COG2236 phosphoribosyltransferase; InterPro IPR000836; KEGG: sgr:SGR_3439  purine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: C1YR73 Predicted phosphoribosyltransferase; PFAM: phosphoribosyl transferase domain
YP_003677983.1	COGs: COG1071 pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type subunit alpha; InterPro IPR017596:IPR001017; KEGG: art:Arth_3193 pyruvate dehydrogenase (acetyl-transferring); PFAM: dehydrogenase E1 component; PRIAM: pyruvate dehydrogenase (acetyl-transferring); SPTR: C1YR72 pyruvate dehydrogenase E1 component, subunit alpha; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; PFAM: dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, subunit alpha
YP_003677984.1	COGs: COG0022 pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type subunit beta; InterPro IPR009014:IPR005476:IPR005475:IPR015941; KEGG: art:Arth_3192 transketolase, central region; PFAM: transketolase; transketolase domain protein; SMART: transketolase; SPTR: C1YR71 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit; PFAM: transketolase, C-terminal domain; transketolase, pyrimidine binding domain
YP_003677985.1	COGs: COG0508 pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterProIPR011053:IPR004167:IPR003016:IPR000089:IPR 001078; KEGG: aau:AAur_3154 branched-chain alpha-keto acid dehydrogenase subunit E2; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; PRIAM: dihydrolipoyllysine-residue (2-methylpropanoyl)transferase; SPTR: C1YR70 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme
YP_003677986.1	COGs: COG0624 acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR001261:IPR011650:IPR017150:IPR002933; KEGG: sen:SACE_4623 carboxypeptidase G2 precursor; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: C1YR69 acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase; PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain
YP_003677987.1	COGs: COG2978  p-aminobenzoyl-glutamate transporter; InterPro IPR004697; KEGG: sen:SACE_4622  aminobenzoyl-glutamate transporter; PFAM: AbgT  transporter; SPTR: C1YR68  p-aminobenzoyl-glutamate transporter; PFAM: AbgT  transporter family; TIGRFAM: p-aminobenzoyl-glutamate transporter family
YP_003677988.1	COGs: COG1522 transcriptional regulators; InterProIPR011008:IPR011991:IPR019887:IPR019888:IPR 000485; KEGG: sen:SACE_4712 transcription regulator AsnC; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type; SPTR: C1YR67 transcriptional regulator; PFAM: IclR helix-turn-helix domain; AsnC family
YP_003677989.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterProIPR016161:IPR016162:IPR015590:IPR002539:IPR 011966; KEGG: rop:ROP_25870 phenylacetic acid degradation protein PaaN; PFAM: MaoC domain protein dehydratase; aldehyde dehydrogenase; SPTR: C1YR66 Phenylacetic acid degradation protein paaN; TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: MaoC like domain; aldehyde dehydrogenase family; TIGRFAM: phenylacetic acid degradation protein paaN
YP_003677990.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013324:IPR013249:IPR013325:IPR014284:IPR 007627; KEGG: sgr:SGR_872 RNA polymerase ECF-subfamily sigma factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: C1YR65 RNA polymerase, sigma subunit, ECF family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003677991.1	KEGG: bcv:Bcav_2617 hypothetical protein; SPTR: C1YR64  uncharacterized protein
YP_003677992.1	COGs: COG2606 conserved hypothetical protein; InterPro IPR007214; KEGG: sro:Sros_8118 hypothetical protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; SPTR: C1YR63 Uncharacterized conserved protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain
YP_003677993.1	COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: gbr:Gbro_0383 ADP-ribosylation/crystallin J1; PFAM: ADP-ribosylation/crystallin J1; SPTR: C1YR62 ADP-ribosylglycohydrolase; PFAM: ADP-ribosylglycohydrolase
YP_003677994.1	COGs: COG2815 conserved hypothetical protein; InterProIPR011009:IPR003610:IPR005543:IPR002290:IPR 000719; KEGG: tfu:Tfu_1041 tyrosine protein kinase:serine/threonine protein kinase:PASTA; PFAM: PASTA domain containing protein; carbohydrate-binding family V/XII; SMART: carbohydrate-binding family V/XII; PASTA domain containing protein; serine/threonine protein kinase; SPTR: C1YR61 Uncharacterized conserved protein; PFAM: protein kinase domain; carbohydrate binding domain; PASTA domain
YP_003677995.1	COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030:IPR016040; KEGG: saq:Sare_0634 NmrA family protein; PFAM: NmrA family protein; SPTR: C1YR60 Predicted nucleoside-diphosphate sugar epimerase; PFAM: NmrA-like family
YP_003677996.1	COGs: COG0683 ABC-type branched-chain amino acid transporters periplasmic component; InterPro IPR001828; KEGG: tfu:Tfu_0074 ABC branched-chain amino acid transporter substrate-binding protein; PFAM: extracellular ligand-binding receptor; SPTR: C1YR59 amino acid-binding protein; PFAM: Receptor family ligand binding region
YP_003677997.1	COGs: COG0411 ABC-type branched-chain amino acid transporters ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: tfu:Tfu_0075 ABC-type branched-chain amino acid transporters ATPase component; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YR58 ABC-type branched-chain amino acid transporter ATPase component; PFAM: ABC transporter
YP_003677998.1	COGs: COG0410 ABC-type branched-chain amino acid transporters ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: tfu:Tfu_0076 ABC-type branched-chain amino acid transporters ATPase component; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YR57 ABC-type branched-chain amino acid transporter ATPase component; PFAM: ABC transporter
YP_003677999.1	COGs: COG0559 Branched-chain amino acid ABC-type transporter permeases; InterPro IPR001851; KEGG: tfu:Tfu_0077 branched-chain amino acid ABC transporter permease; PFAM: inner-membrane translocator; SPTR: C1YR56 Branched-chain amino acid ABC-type transporter permease; PFAM: Branched-chain amino acid transporter / permease
YP_003678000.1	COGs: COG4177 ABC-type branched-chain amino acid transporter permease; InterPro IPR001851; KEGG: tfu:Tfu_0078 branched-chain amino acid ABC transporter permease; PFAM: inner-membrane translocator; SPTR: C1YR55 ABC-type branched-chain amino acid transporter permease; PFAM: Branched-chain amino acid transporter / permease
YP_003678001.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: tfu:Tfu_0079 alpha/beta hydrolase superfamily protein; PFAM: alpha/beta hydrolase fold; SPTR: C1YR54 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003678002.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: fre:Franean1_3110 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YR53  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003678003.1	COGs: COG1846 transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: fre:Franean1_3111 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YR52 transcriptional regulator; PFAM: MarR family
YP_003678004.1	COGs: COG3835 Sugar diacid utilization regulator; InterPro IPR003018; KEGG: tfu:Tfu_0080 GAF domain-containing protein; PFAM: GAF domain protein; SMART: GAF domain protein; SPTR: C1YR51 CdaR family transcriptional regulator family; PFAM: GAF domain
YP_003678005.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR011294:IPR002347; KEGG: tfu:Tfu_0081 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YR50 3-hydroxybutyrate dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short chain dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase
YP_003678006.1	COGs: COG3509 poly(3-hydroxybutyrate) depolymerase; InterPro IPR010126; KEGG: tfu:Tfu_0082 esterase, PHB depolymerase; PFAM: esterase PHB depolymerase; PRIAM: feruloyl esterase; SPTR: C1YR49 esterase, PHB depolymerase family; TIGRFAM: esterase, PHB depolymerase family; PFAM: esterase PHB depolymerase; TIGRFAM: esterase, PHB depolymerase family
YP_003678007.1	KEGG: hypothetical protein; K10843 DNA excision repair protein ERCC-3; SPTR: C1YR48  uncharacterized protein
YP_003678008.1	COGs: COG1846 transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: msl:Msil_2325 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YR47 MarR family transcriptional regulator; PFAM: MarR family
YP_003678009.1	COGs: COG0318 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: cai:Caci_4817 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YR46 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme
YP_003678010.1	KEGG: hypothetical protein; SPTR: C1YR45  uncharacterized protein
YP_003678011.1	KEGG: tfu:Tfu_2330 hypothetical protein; SPTR: C1YR44  uncharacterized protein
YP_003678012.1	KEGG: saq:Sare_0214 cholesterol esterase; SPTR: C1YR43  uncharacterized protein
YP_003678013.1	InterPro IPR011055:IPR016047; KEGG: sgr:SGR_755 hypothetical protein; PFAM: peptidase M23; SPTR: C1YI09 metalloendopeptidase-like membrane protein; PFAM: peptidase family M23
YP_003678014.1	COGs: COG0350 methylated DNA-protein cysteine methyltransferase; InterPro IPR014048:IPR011991:IPR001497:IPR008332; KEGG: pfl:PFL_5108 methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein; PRIAM: methylated-DNA--[protein]-cysteine S-methyltransferase; SPTR: C1YI08 O-6-methylguanine DNA methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase
YP_003678015.1	COGs: COG2169 adenosine deaminase; InterProIPR011257:IPR004026:IPR012294:IPR009057:IPR 010316:IPR000005:IPR003265:IPR018060; KEGG: nca:Noca_3301 DNA-3-methyladenine glycosylase II / transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase; PFAM: Ada metal-binding domain protein; helix-turn-helix- domain containing protein AraC type; AlkA domain protein; HhH-GPD family protein; SMART: Helix-turn-helix, AraC domain; HhH-GPD family protein; SPTR: C1YI07 DNA-O6-methylguanine--protein-cysteine S-methyltransferase; DNA-3-methyladenine glycosylase II; transcriptional regulator Ada; PFAM: metal binding domain of Ada; AlkA N-terminal domain; Bacterial regulatory helix-turn-helix proteins, AraC family; HhH-GPD superfamily base excision DNA repair protein
YP_003678016.1	KEGG: tfu:Tfu_2579 hypothetical protein; SPTR: C1YI06  uncharacterized protein
YP_003678017.1	COGs: COG2185 methylmalonyl-CoA mutase C-terminal domain/subunit (cobalamin-binding); InterPro IPR006158:IPR006159; KEGG: stp:Strop_3814 cobalamin B12-binding domain-containing protein; PFAM: cobalamin B12-binding domain protein; SPTR: C1YI05 methylmalonyl-CoA mutase family protein; PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain
YP_003678018.1	COGs: COG0045 Succinyl-CoA synthetase beta subunit; InterProIPR016102:IPR013816:IPR017866:IPR013650:IPR 005811:IPR005809:IPR011761; KEGG: tfu:Tfu_2577 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: succinate--CoA ligase (ADP-forming); SPTR: C1YHN3 Succinyl-CoA synthetase (ADP-forming) subunit beta; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, subunit beta
YP_003678019.1	COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterProIPR016040:IPR005810:IPR016102:IPR003781:IPR 017440:IPR005811; KEGG: tfu:Tfu_2576 succinyl-CoA synthetase subunit alpha; PFAM: CoA-binding protein; ATP-citrate lyase/succinyl-CoA ligase; SMART: CoA-binding protein; SPTR: C1YHN2 Succinyl-CoA ligase [ADP-forming] subunit alpha; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, subunit alpha
YP_003678020.1	InterPro IPR012551; KEGG: tfu:Tfu_2402 hypothetical protein; PFAM: protein of unknown function DUF1707; SPTR: C1YI04  uncharacterized protein; PFAM: Domain of unknown function (DUF1707)
YP_003678021.1	KEGG: tfu:Tfu_2575 hypothetical protein; SPTR: C1YI01  uncharacterized protein
YP_003678022.1	COGs: COG1197 transcription-repair coupling factor (superfamily II helicase); InterProIPR011545:IPR004576:IPR003711:IPR001650:IPR 014021:IPR005118:IPR014001; KEGG: tfu:Tfu_0424 transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase; TRCF domain protein; SMART: DEAD-like helicase ; helicase; SPTR: C1YHZ5 transcription-repair coupling factor Mfd; TIGRFAM: transcription-repair coupling factor; PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd)
YP_003678023.1	COGs: COG0529 adenylylsulfate kinase and related kinase; InterPro IPR015947:IPR002650:IPR002891; KEGG: tfu:Tfu_0425 adenylylsulfate kinase; PFAM: adenylylsulfate kinase; ATP-sulfurylase; SPTR: C1YI00 adenylylsulfate kinase ApsK; TIGRFAM: adenylylsulfate kinase; PFAM: ATP-sulfurylase; adenylylsulfate kinase; TIGRFAM: adenylylsulfate kinase (apsK)
YP_003678024.1	COGs: COG3956 protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR004518:IPR011551; KEGG: tfu:Tfu_0426 MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: C1YI03 MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein
YP_003678025.1	COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR002938:IPR003042; KEGG: sen:SACE_6186 monooxygenase, FAD-binding; PFAM: monooxygenase FAD-binding; SPTR: C1YI02 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain
YP_003678026.1	InterPro IPR009057:IPR012287:IPR001647; KEGG: svi:Svir_26800 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YHZ9 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003678027.1	COGs: COG0148 Enolase; InterPro IPR020809:IPR020811:IPR020810:IPR000941; KEGG: tfu:Tfu_0428 phosphopyruvate hydratase; PFAM: Enolase-like; PRIAM: phosphopyruvate hydratase; SPTR: C1YHZ8 Enolase; TIGRFAM: enolase; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase
YP_003678028.1	InterPro IPR007060; KEGG: tfu:Tfu_0429 hypothetical protein; PFAM: septum formation initiator; SPTR: C1YHZ7 septum formation initiator; PFAM: septum formation initiator
YP_003678029.1	COGs: COG0239 integral membrane protein possibly involved in chromosome condensation; InterPro IPR003691; KEGG: sro:Sros_5461 camphor resistance protein CrcB; PFAM: Camphor resistance CrcB protein; SPTR: C1YHZ6 protein crcB homolog; TIGRFAM: CrcB protein; PFAM: CrcB-like protein; TIGRFAM: crcB protein
YP_003678030.1	COGs: COG0239 integral membrane protein possibly involved in chromosome condensation; InterPro IPR003691; KEGG: sro:Sros_5463 integral membrane protein possibly involved in chromosome condensation-like protein; PFAM: Camphor resistance CrcB protein; SPTR: C1YHZ4 protein crcB homolog; TIGRFAM: CrcB protein; PFAM: CrcB-like protein; TIGRFAM: crcB protein
YP_003678031.1	COGs: COG1507 conserved hypothetical protein; InterPro IPR007511; KEGG: tfu:Tfu_0430 hypothetical protein; PFAM: protein of unknown function DUF501; SPTR: C1YHZ3 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF501)
YP_003678032.1	COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: tfu:Tfu_0431 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase; SPTR: C1YHZ2 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase family
YP_003678033.1	COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027:IPR001327; KEGG: tfu:Tfu_0432 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: C1YHZ1 NADH dehydrogenase, FAD-containing subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003678034.1	COGs: COG3835 Sugar diacid utilization regulator; KEGG: sen:SACE_1980 CdaR family transcriptional regulator; SPTR: C1YHZ0 Sugar diacid utilization regulator
YP_003678035.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterProIPR005931:IPR016161:IPR015590:IPR016160:IPR 016162; KEGG: ami:Amir_1082 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; SPTR: C1YHY9 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 1
YP_003678036.1	COGs: COG0506 proline dehydrogenase; InterPro IPR008219:IPR002872; KEGG: ami:Amir_1081 proline dehydrogenase; PFAM: proline dehydrogenase; SPTR: C1YHY8 L-proline dehydrogenase; PFAM: proline dehydrogenase
YP_003678037.1	COGs: COG4760 membrane protein; InterPro IPR010539; KEGG: tfu:Tfu_0435 hypothetical protein; PFAM: protein of unknown function DUF1112; SPTR: C1YHY7 Predicted membrane protein, COG4760
YP_003678038.1	KEGG: sro:Sros_8571 hypothetical protein; SPTR: C1YHY6  uncharacterized protein
YP_003678039.1	COGs: COG0183 acetyl-CoA acetyltransferase; InterPro IPR016039:IPR002155:IPR016038; KEGG: tfu:Tfu_0436 acetyl-CoA acetyltransferase; PRIAM: acetyl-CoA C-acyltransferase; SPTR: C1YHY5 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase, C-terminal domain; thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_003678040.1	InterPro IPR013830:IPR013831:IPR001087; KEGG: tfu:Tfu_0437  secreted protein; PFAM: lipolytic protein G-D-S-L family; SPTR: C1YHY4 lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/acylhydrolase
YP_003678041.1	COGs: COG0031 Cysteine synthase; InterProIPR001926:IPR005829:IPR001216:IPR000644:IPR 005857; KEGG: tfu:Tfu_0438 cystathionine beta-synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; hypothetical protein; SMART: hypothetical protein; SPTR: C1YHY3 cystathionine beta-synthase; TIGRFAM: cystathionine beta-synthase; PFAM: CBS domain; pyridoxal-phosphate dependent enzyme; TIGRFAM: cystathionine beta-synthase
YP_003678042.1	COGs: COG0110 acetyltransferase (isoleucine patch superfamily); InterPro IPR001451:IPR011004; KEGG: tfu:Tfu_0439  sugar acetyltransferase; SPTR: C1YHY2 acyltransferase family protein; PFAM: Bacterial transferase hexapeptide (three repeats)
YP_003678043.1	COGs: COG0626 cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277:IPR015424:IPR015422:IPR015421; KEGG: tfu:Tfu_0440 cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; PRIAM: cystathionine gamma-synthase; SPTR: C1YHY1 cystathionine gamma-lyase; PFAM: Cys/Met metabolism PLP-dependent enzyme
YP_003678044.1	KEGG: ami:Amir_5682 carbonate dehydratase; SPTR: C1YHY0  uncharacterized protein
YP_003678045.1	COGs: COG2188 transcriptional regulators; InterPro IPR011663:IPR000524:IPR011991; KEGG: sro:Sros_2096  transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SPTR: C1YHX9 transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_003678046.1	COGs: COG2188 transcriptional regulators; InterPro IPR011663:IPR000524:IPR011991; KEGG: sro:Sros_0156  transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SMART: regulatory protein GntR HTH; SPTR: C1YHX8 transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_003678047.1	COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: sro:Sros_8559 magnesium protoporphyrin chelatase, SPTR: C1YHX5 Mg-chelatase subunit ChlI; PFAM: Sigma-54 interaction domain
YP_003678048.1	COGs: COG4398 conserved hypothetical protein; InterPro IPR013702:IPR019494:IPR016741; KEGG: tfu:Tfu_0444 hypothetical protein; PFAM: hypothetical protein; FIST C domain; SPTR: C1YHX4 Uncharacterized conserved protein; PFAM: FIST C domain; FIST N domain
YP_003678049.1	KEGG: ami:Amir_6699 hypothetical protein; SPTR: C1YHX3  uncharacterized protein
YP_003678050.1	InterPro IPR010432; KEGG: tfu:Tfu_0445 hypothetical protein; PFAM: RDD domain containing protein; SPTR: C1YHX2 Predicted membrane protein/domain; PFAM: RDD family
YP_003678051.1	COGs: COG0782 transcription elongation factor; InterPro IPR001437:IPR018151:IPR006359; KEGG: tcu:Tcur_1064 transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; SPTR: C1YHX1 transcription elongation factor; TIGRFAM: transcription elongation factor GreA; PFAM: domain; transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA
YP_003678052.1	KEGG: tfu:Tfu_0448 hypothetical protein; SPTR: C1YHX0  uncharacterized protein
YP_003678053.1	COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR000209:IPR003737:IPR017811; KEGG: tfu:Tfu_0449 hypothetical protein; PFAM: LmbE family protein; SPTR: C1YHW9 Mycothiol conjugate amidase Mca; TIGRFAM: mycothiol conjugate amidase Mca; PFAM: GlcNAc-PI de-N-acetylase; TIGRFAM: mycothiol conjugate amidase Mca
YP_003678054.1	KEGG: kra:Krad_4568 hypothetical protein; SPTR: C1YHW8  uncharacterized protein
YP_003678055.1	COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR008928:IPR012336:IPR004879:IPR012335; KEGG: tfu:Tfu_0451 hypothetical protein; PFAM: protein of unknown function DUF255; SPTR: C1YHW7 Conserved protein containing a thioredoxin domain; PFAM: protein of unknown function, DUF255
YP_003678056.1	COGs: COG0515 serine/threonine protein kinase; InterPro IPR011009:IPR017442:IPR000719:IPR017441; KEGG: tfu:Tfu_0454 tyrosine protein kinase:serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SPTR: C1YHW6 protein kinase family protein; PFAM: protein kinase domain
YP_003678057.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013325:IPR013324:IPR007627:IPR013249:IPR 014284; KEGG: tfu:Tfu_0455 sigma subunit sigma24 -like protein; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: C1YHW5 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003678058.1	COGs: COG0020 undecaprenyl pyrophosphate synthase; InterPro IPR001441:IPR018520; KEGG: tfu:Tfu_0456 undecaprenyl pyrophosphate synthetase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: C1YHW4 undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM:  undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase
YP_003678059.1	COGs: COG1875 ATPase related to phosphate starvation-inducible protein PhoH; InterPro IPR003714:IPR006596; KEGG: tfu:Tfu_0457 nucleotide binding protein, PINc; PFAM: PhoH family protein; SMART: nucleotide binding protein PINc; SPTR: C1YHN1 PhoH family protein; PFAM: PhoH-like protein
YP_003678060.1	KEGG: sro:Sros_8883 hypothetical protein; SPTR: C1YHN0  uncharacterized protein
YP_003678061.1	KEGG: tfu:Tfu_0458 secreted protein; SPTR: C1YHM9  uncharacterized protein
YP_003678062.1	KEGG: tfu:Tfu_0458 secreted protein; SPTR: C1YHM8  uncharacterized protein; PFAM: transglycosylase SLT domain
YP_003678063.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR008271:IPR011009:IPR017442:IPR000719:IPR 017441; KEGG: cai:Caci_1619 serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SPTR: C1YHM7 protein kinase family protein; PFAM: protein kinase domain
YP_003678064.1	COGs: COG0114 Fumarase; InterProIPR000362:IPR008948:IPR020557:IPR003031:IPR 018951; KEGG: tfu:Tfu_0459 fumarate hydratase; PFAM: fumarate lyase; Fumarase C-like; SPTR: C1YHM5 Fumarase; PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: fumarate hydratase, class II
YP_003678065.1	InterPro IPR012551; KEGG: tfu:Tfu_0460 hypothetical protein; PFAM: protein of unknown function DUF1707; SPTR: C1YHM2  uncharacterized protein; PFAM: Predicted membrane protein (DUF2154); Domain of unknown function (DUF1707)
YP_003678066.1	InterPro IPR007087; KEGG: stp:Strop_4428 hypothetical protein; SPTR: C1YHL9  uncharacterized protein
YP_003678067.1	KEGG: nfa:nfa30130 hypothetical protein; SPTR: C1YHM6  uncharacterized protein
YP_003678068.1	COGs: COG0675 transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: sma:SAV_47 IS200-like transposase; PFAM:  transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; SPTR: C1YHM4 transposase, IS605 OrfB family, central region; TIGRFAM: transposase, IS605 OrfB family; PFAM: Helix-turn-helix domain; transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region
YP_003678069.1	KEGG: tfu:Tfu_0463 hypothetical protein; SPTR: C1YHM1  uncharacterized protein
YP_003678070.1	COGs: COG1494 fructose-1 6-bisphosphatase/sedoheptulose 1 7-bisphosphatase and related protein; InterPro IPR004464; KEGG: tfu:Tfu_0464 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein; PRIAM: fructose-bisphosphatase; SPTR: C1YHM0 fructose-1,6-bisphosphatase, class II; TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II
YP_003678071.1	InterPro IPR009057:IPR012287:IPR001647; KEGG: tfu:Tfu_0465 hypothetical protein; PFAM: regulatory protein TetR; SPTR: C1YHL8 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003678072.1	KEGG: tfu:Tfu_0466  secreted protein; SPTR: C1YHL7  uncharacterized protein
YP_003678073.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR015358:IPR000551:IPR009061; KEGG: nml:Namu_0947 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; SPTR: C1YHL6 transcriptional regulator, MerR family; PFAM: MerR family regulatory protein; MerR, DNA binding
YP_003678074.1	COGs: COG3118 thioredoxin domain-containing protein; InterProIPR017936:IPR017937:IPR012336:IPR005746:IPR 006662:IPR013766:IPR012335; KEGG: nml:Namu_0946 thioredoxin; PFAM: thioredoxin domain; SPTR: C1YHL5 thioredoxin; TIGRFAM: thioredoxin; PFAM: thioredoxin; TIGRFAM: thioredoxin
YP_003678075.1	COGs: COG0761 Penicillin tolerance protein; InterPro IPR003451; KEGG: tfu:Tfu_0471 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein; PRIAM: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SPTR: C1YHL4 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)
YP_003678076.1	KEGG: tfu:Tfu_0470 hypothetical protein; SPTR: C1YHL3  uncharacterized protein
YP_003678077.1	COGs: COG4974 Site-specific recombinase XerD; InterPro IPR013762:IPR002104:IPR011010; KEGG: sma:SAV_3980 phage-related integrase; PFAM: integrase family protein; SPTR: C1YHL2 Site-specific recombinase XerD; PFAM: Phage integrase family
YP_003678078.1	KEGG: sco:SCO5347 replication initiation protein; SPTR: C1YHL1  uncharacterized protein
YP_003678079.1	KEGG: apv:Apar_0057 ABC transporter; SPTR: C1YHL0  uncharacterized protein
YP_003678080.1	COGs: COG2188 transcriptional regulators; InterPro IPR011991:IPR000524:IPR011663; KEGG: svi:Svir_33520 transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C1YHK9 transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_003678081.1	InterPro IPR000182:IPR016181; KEGG: svi:Svir_33510 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YHK8 acetyltransferase; PFAM: acetyltransferase (GNAT) family
YP_003678082.1	KEGG: tfu:Tfu_1197 hypothetical protein; SPTR: C1YHK7  uncharacterized protein; PFAM: protein of unknown function (DUF3060)
YP_003678083.1	COGs: COG1570 exonuclease VII large subunit; InterPro IPR004365:IPR020579:IPR003753; KEGG: tfu:Tfu_0468 exodeoxyribonuclease VII large subunit; PFAM: exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type; PRIAM: exodeoxyribonuclease VII; SPTR: Q47SR1 exodeoxyribonuclease 7 large subunit; TIGRFAM: exodeoxyribonuclease VII large subunit; PFAM: exonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit
YP_003678084.1	InterPro IPR003761; KEGG: tfu:Tfu_0467 exodeoxyribonuclease VII small subunit; PFAM: exonuclease VII small subunit; SPTR: C1YHK4 exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII small subunit; PFAM: exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII small subunit
YP_003678085.1	KEGG: tfu:Tfu_0472 hypothetical protein; SPTR: C1YHK3  uncharacterized protein
YP_003678086.1	COGs: COG1322 conserved hypothetical protein; InterPro IPR003798; KEGG: sro:Sros_8478 hypothetical protein; PFAM: protein of unknown function DUF195; SPTR: C1YHK2 Uncharacterized conserved protein; PFAM: RmuC family
YP_003678087.1	KEGG: cmi:CMM_0113  hydrolase; SPTR: C1YHK1 Predicted hydrolase or acyltransferase of alpha/beta superfamily
YP_003678088.1	InterPro IPR006342; KEGG: mpt:Mpe_A0618 hypothetical protein; SPTR: C1YHK0 methyltransferase, FkbM family; TIGRFAM: methyltransferase FkbM family; TIGRFAM: methyltransferase, FkbM family
YP_003678089.1	COGs: COG0012 GTPase probable translation factor; InterProIPR012676:IPR012675:IPR002917:IPR013029:IPR 004396:IPR006073; KEGG: tfu:Tfu_0473 GTP-dependent nucleic acid-binding protein EngD; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related; SPTR: C1YHJ9 GTP-binding protein YchF; TIGRFAM: GTP-binding protein YchF; PFAM: GTPase of unknown function; protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF
YP_003678090.1	COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: bfa:Bfae_22670 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: C1YHJ8 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: acyltransferase
YP_003678091.1	KEGG: tfu:Tfu_0474 hypothetical protein; SPTR: C1YHJ7  uncharacterized protein
YP_003678092.1	KEGG: tfu:Tfu_0475 hypothetical protein; SPTR: C1YHJ6  uncharacterized protein
YP_003678093.1	KEGG: tfu:Tfu_0476 ATPase involved in chromosome partitioning; SPTR: C1YHJ5 ATPase involved in chromosome partitioning
YP_003678094.1	InterPro IPR008775:IPR012774; KEGG: sen:SACE_0486 ectoine hydroxylase; PFAM: phytanoyl-CoA dioxygenase; SPTR: C1YHJ4 Ectoine hydroxylase; TIGRFAM: ectoine hydroxylase; PFAM: phytanoyl-CoA dioxygenase (PhyH); TIGRFAM: ectoine hydroxylase
YP_003678095.1	InterPro IPR010916:IPR018532; KEGG: hypothetical protein; PFAM: Domain of unknown function DUF1994; SPTR: C1YHJ3  uncharacterized protein; PFAM: Domain of unknown function (DUF1994)
YP_003678096.1	InterPro IPR003593:IPR016628; KEGG: tfu:Tfu_0477 ATPase; SMART: ATPase AAA; SPTR: C1YHJ2  uncharacterized protein
YP_003678097.1	KEGG: tfu:Tfu_1269 hypothetical protein; SPTR: C1YHJ1  uncharacterized protein
YP_003678098.1	KEGG: sma:SAV_5996 hypothetical protein; SPTR: C1YHJ0  uncharacterized protein
YP_003678099.1	KEGG: sro:Sros_0985 hypothetical protein; SPTR: C1YHI9  uncharacterized protein
YP_003678100.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR008271:IPR011009:IPR017442:IPR017441:IPR 000719; KEGG: sro:Sros_8510 serine/threonine protein kinase-like protein; PFAM: serine/threonine-protein kinase-like domain; SPTR: C1YHI8 protein kinase family protein; PFAM: protein kinase domain
YP_003678101.1	KEGG: fra:Francci3_0071 hypothetical protein; SPTR: C1YHI7  uncharacterized protein
YP_003678102.1	KEGG: tfu:Tfu_0478 hypothetical protein; SPTR: C1YHI6  uncharacterized protein; PFAM: TrbL/VirB6 plasmid conjugal transfer protein
YP_003678103.1	KEGG: tfu:Tfu_0479 hypothetical protein; SPTR: C1YHI5  uncharacterized protein
YP_003678104.1	COGs: COG0791 cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: tfu:Tfu_0480 cell wall-associated hydrolase (invasion-associated proteins); PFAM: NLP/P60 protein; SPTR: C1YHI4 cell wall-associated hydrolase, invasion-associated protein; PFAM: NlpC/P60 family
YP_003678105.1	COGs: COG1435 thymidine kinase; InterPro IPR020633:IPR001267; KEGG: bcv:Bcav_1932 thymidine kinase; PFAM: thymidine kinase; PRIAM: thymidine kinase; SPTR: C1YHI2 thymidine kinase; PFAM: thymidine kinase
YP_003678106.1	InterPro IPR005821; KEGG: tfu:Tfu_0383 hypothetical protein; PFAM: ion transporter; SPTR: C1YHI1 ion transporter; PFAM: ion transporter
YP_003678107.1	KEGG: tfu:Tfu_0736 hypothetical protein; SPTR: C1YHI0  uncharacterized protein
YP_003678108.1	KEGG: sen:SACE_3128 hypothetical protein; SPTR: C1YHH9  uncharacterized protein
YP_003678109.1	KEGG: ach:Achl_1859 hypothetical protein; SPTR: C1YHH8  uncharacterized protein
YP_003678110.1	KEGG: tfu:Tfu_0736 hypothetical protein; SPTR: C1YHH7  uncharacterized protein
YP_003678111.1	KEGG: bpy:Bphyt_1378 hypothetical protein; SPTR: C1YHH6  uncharacterized protein
YP_003678112.1	KEGG: tfu:Tfu_0596 hypothetical protein; SPTR: C1YHH5  uncharacterized protein; PFAM: Family of unknown function (DUF695)
YP_003678113.1	COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; InterPro IPR014729:IPR018318:IPR004506; KEGG: tfu:Tfu_0597 tRNA-specific 2-thiouridylase MnmA; PFAM: tRNA methyl transferase-like; SPTR: C1YHH4 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
YP_003678114.1	COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: tfu:Tfu_0598 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: C1YHH3 Uncharacterized membrane-associated protein; PFAM: SNARE associated Golgi protein
YP_003678115.1	InterPro IPR002629; KEGG: tfu:Tfu_0602 hypothetical protein; PFAM: methionine synthase vitamin-B12 independent; SPTR: C1YHH2 Cobalamin-independent methionine synthase; PFAM: Cobalamin-independent synthase, Catalytic domain
YP_003678116.1	COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); InterProIPR010994:IPR016027:IPR001357:IPR012340:IPR 018239:IPR013839:IPR004150:IPR004149:IPR000445:IPR013840:I PR003583:IPR001679; KEGG: tfu:Tfu_0603 NAD-dependent DNA ligase LigA; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; zinc-finger NAD-dependent DNA ligase C4-type; helix-hairpin-helix motif; BRCT domain protein; PRIAM: DNA ligase (NAD(+)); SMART: NAD-dependent DNA ligase ; DNA-binding protein; BRCT domain protein; SPTR: C1YHH1 DNA ligase; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; Helix-hairpin-helix motif; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent
YP_003678117.1	COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR000160:IPR001633; KEGG: tfu:Tfu_0604 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: C1YHH0 Diguanylate cyclase (GGDEF) domain-containing protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003678118.1	COGs: COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; InterPro IPR003837; KEGG: tfu:Tfu_0605 aspartyl/glutamyl-tRNA amidotransferase subunit C; PFAM: Glu-tRNAGln amidotransferase C subunit; SPTR: C1YHG9 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase subunit C; PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit C
YP_003678119.1	COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR000120:IPR020556:IPR004412; KEGG: tfu:Tfu_0606 aspartyl/glutamyl-tRNA amidotransferase subunit A; PFAM: amidase; SPTR: C1YHG8 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, subunit alpha; PFAM: amidase; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, subunit alpha
YP_003678120.1	InterPro IPR019948:IPR019931; KEGG: tfu:Tfu_0607 surface protein; PFAM: Gram-positive anchor; SPTR: C1YHG7  uncharacterized protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; TIGRFAM: LPXTG-motif cell wall anchor domain
YP_003678121.1	InterPro IPR004176; KEGG: kra:Krad_2787 Clp domain protein; PFAM: Clp domain protein; SPTR: C1YHG6 Clp amino terminal domain-containing protein; PFAM: polyketide cyclase / dehydrase and lipid transport; Clp amino terminal domain
YP_003678122.1	KEGG: kra:Krad_2786 hypothetical protein; SPTR: C1YHW3  uncharacterized protein
YP_003678123.1	InterPro IPR019948:IPR019931; KEGG: tfu:Tfu_0607 surface protein; PFAM: Gram-positive anchor; SPTR: C1YHW2  uncharacterized protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; TIGRFAM: LPXTG-motif cell wall anchor domain
YP_003678124.1	InterPro IPR019931; KEGG: tfu:Tfu_0608 surface protein; SPTR: C1YHW1  uncharacterized protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; TIGRFAM: LPXTG-motif cell wall anchor domain
YP_003678125.1	COGs: COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); InterProIPR003789:IPR017958:IPR006075:IPR006107:IPR 018027:IPR004413; KEGG: tfu:Tfu_0609 aspartyl/glutamyl-tRNA amidotransferase subunit B; PFAM: GatB region; GatB central domain protein; Asn/Gln amidotransferase; SPTR: C1YHW0 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit beta
YP_003678126.1	COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterProIPR000160:IPR000014:IPR001633:IPR001610:IPR 013655; KEGG: tfu:Tfu_0610 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: C1YHV9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; cation diffusion facilitator family transporter; diguanylate cyclase (GGDEF) domain
YP_003678127.1	COGs: COG0028 thiamine pyrophosphate-requiring protein; InterProIPR012846:IPR011766:IPR012000:IPR000399:IPR 012001; KEGG: tfu:Tfu_0611 acetolactate synthase 1 catalytic subunit; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; SPTR: C1YHV8 acetolactate synthase; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme, central domain; thiamine pyrophosphate enzyme, N-terminal TPP binding domain; thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase large subunit
YP_003678128.1	COGs: COG0440 acetolactate synthase small (regulatory) subunit; InterPro IPR002912:IPR004789:IPR019455; KEGG: tfu:Tfu_0612 acetolactate synthase 3 regulatory subunit; PFAM: acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; SPTR: C1YHV7 acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit
YP_003678129.1	COGs: COG0059 Ketol-acid reductoisomerase; InterProIPR008927:IPR016040:IPR013116:IPR000506:IPR 013023; KEGG: tfu:Tfu_0613 ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase; PRIAM: Ketol-acid reductoisomerase; SPTR: C1YHV6 Ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase
YP_003678130.1	COGs: COG0111 phosphoglycerate dehydrogenase and related dehydrogenase; InterProIPR016040:IPR006140:IPR006139:IPR002912:IPR 006236; KEGG: tfu:Tfu_0614 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; SPTR: C1YHV5 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase
YP_003678131.1	COGs: COG0473 isocitrate/isopropylmalate dehydrogenase; InterPro IPR001804:IPR019818; KEGG: tfu:Tfu_0615 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: C1YHV3 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase
YP_003678132.1	COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544:IPR005786; KEGG: tfu:Tfu_0616 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; SPTR: C1YHV2 Branched chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II
YP_003678133.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterProIPR000891:IPR002034:IPR013709:IPR005675:IPR 013785; KEGG: tfu:Tfu_0617  alpha-isopropylmalate/homocitrate synthase family transferase; PFAM: LeuA allosteric (dimerisation) domain; pyruvate carboxyltransferase; PRIAM: (R)-citramalate synthase; SPTR: C1YHV1 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein
YP_003678134.1	KEGG: tfu:Tfu_0618 hypothetical protein; SPTR: C1YHV0  uncharacterized protein; PFAM: protein of unknown function (DUF3152)
YP_003678135.1	COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR011234:IPR018833:IPR002529; KEGG: tfu:Tfu_0621 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF2437; PRIAM: 5-carboxymethyl-2-hydroxymuconate delta-isomerase; SPTR: C1YHU9 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase; PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family
YP_003678136.1	InterPro IPR013830:IPR013831:IPR001087; KEGG: tfu:Tfu_2470 fibronectin, type III; PFAM: lipolytic protein G-D-S-L family; SPTR: C1YHU8 lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/acylhydrolase
YP_003678137.1	COGs: COG0008 glutamyl- and glutaminyl-tRNA synthetase; InterProIPR008925:IPR014729:IPR020061:IPR020751:IPR 001412:IPR020058:IPR004527:IPR020060; KEGG: tfu:Tfu_0623 glutamyl-tRNA synthetase; PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; SPTR: C1YHU7 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family
YP_003678138.1	KEGG: smt:Smal_1703 hypothetical protein; SPTR: C1YHU6  uncharacterized protein
YP_003678139.1	InterPro IPR010260; KEGG: tfu:Tfu_0699 hypothetical protein; PFAM: prophage CP4-57 regulator; SPTR: C1YHU5 Prophage CP4-57 regulatory protein (AlpA); PFAM: prophage CP4-57 regulator protein (AlpA)
YP_003678140.1	COGs: COG1414 transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: tfu:Tfu_0625 regulatory proteins, IclR; PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; SPTR: C1YHU4 IclR family transcriptional regulator; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_003678141.1	COGs: COG0065 3-isopropylmalate dehydratase large subunit; InterProIPR015931:IPR018136:IPR001030:IPR015932:IPR 004430; KEGG: tfu:Tfu_0626 isopropylmalate isomerase large subunit; PFAM: aconitate hydratase domain protein; SPTR: C1YHU3 3-isopropylmalate dehydratase, large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit
YP_003678142.1	COGs: COG0066 3-isopropylmalate dehydratase small subunit; InterPro IPR000573:IPR004431:IPR015928; KEGG: tfu:Tfu_0627 isopropylmalate isomerase small subunit; PFAM: aconitate hydratase domain protein; SPTR: C1YHU2 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit
YP_003678143.1	COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119:IPR010992:IPR020816; KEGG: tfu:Tfu_0628 histone-like DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: C1YHU1 Bacterial nucleoid DNA-binding protein; PFAM: Bacterial DNA-binding protein
YP_003678144.1	COGs: COG1920 conserved hypothetical protein; InterPro IPR002835; KEGG: tcu:Tcur_3458 protein of unknown function DUF121; SPTR: C1YHU0 Uncharacterized conserved protein; TIGRFAM: 2-phospho-L-lactate guanylyltransferase CofC; PFAM: Guanylyl transferase CofC like; TIGRFAM: 2-phospho-L-lactate guanylyltransferase CofC
YP_003678145.1	COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: tfu:Tfu_0630 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: C1YHT9 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_003678146.1	COGs: COG0240 glycerol-3-phosphate dehydrogenase; InterProIPR006168:IPR016040:IPR011128:IPR013328:IPR 008927:IPR006109; KEGG: tfu:Tfu_0631 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; PRIAM: glycerol-3-phosphate dehydrogenase (NAD(P)(+)); SPTR: C1YHT8 glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
YP_003678147.1	COGs: COG0626 cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277:IPR015424:IPR015422:IPR015421; KEGG: tfu:Tfu_0632 cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; PRIAM: cystathionine gamma-lyase; SPTR: C1YHT7 cystathionine beta-lyase/cystathionine gamma-synthase; PFAM: Cys/Met metabolism PLP-dependent enzyme
YP_003678148.1	COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; InterProIPR005905:IPR013816:IPR013817:IPR011095:IPR 011127:IPR016185:IPR000291:IPR011761; KEGG: tfu:Tfu_0633 D-alanyl-alanine synthetase A; PFAM: D-alanine--D-alanine ligase domain protein; PRIAM: D-alanine--D-alanine ligase; SPTR: C1YHT6 D-alanine--D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase
YP_003678149.1	COGs: COG4636 conserved hypothetical protein; InterPro IPR012296:IPR008538; KEGG: sgr:SGR_3203 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: C1YHT5 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF820)
YP_003678150.1	COGs: COG2981 Uncharacterized protein involved in cysteine biosynthesis; InterPro IPR007496; KEGG: tfu:Tfu_0634  integral membrane protein; PFAM: protein of unknown function DUF540; SPTR: C1YHT4 Uncharacterized protein involved in cysteine biosynthesis; PFAM: protein of unknown function (DUF540)
YP_003678151.1	KEGG: afw:Anae109_3372 TPR repeat-containing protein; SPTR: C1YHT3  uncharacterized protein
YP_003678152.1	COGs: COG4987 ABC-type transporter involved in cytochrome bd biosynthesis fused ATPase and permease components; InterProIPR003593:IPR017940:IPR011527:IPR003439:IPR 014223; KEGG: tfu:Tfu_0635 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YHT2 Cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydC; TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter; ABC transporter transmembrane protein; TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC
YP_003678153.1	COGs: COG4988 ABC-type transporter involved in cytochrome bd biosynthesis ATPase and permease components; InterProIPR017940:IPR003439:IPR017871:IPR014216:IPR 003593:IPR011527:IPR001140; KEGG: tfu:Tfu_0636 ABC transporter ATP-binding protein; PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; SPTR: C1YHT1 Cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD; TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter; ABC transporter transmembrane protein; TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD
YP_003678154.1	COGs: COG1294 cytochrome bd-type quinol oxidase subunit 2; InterPro IPR003317; KEGG: tfu:Tfu_0637 cytochrome bd ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; SPTR: C1YHT0 cytochrome d oxidase cyd, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase subunit II (cydB)
YP_003678155.1	COGs: COG1271 cytochrome bd-type quinol oxidase subunit 1; InterPro IPR002585; KEGG: tfu:Tfu_0638  cytochrome oxidase subunit I; PFAM: cytochrome bd ubiquinol oxidase subunit I; SPTR: C1YHS9 cytochrome bd-type quinol oxidase subunit 1; PFAM: Bacterial cytochrome Ubiquinol Oxidase
YP_003678156.1	COGs: COG3544 conserved hypothetical protein; InterPro IPR005183; KEGG: tfu:Tfu_0639  secreted protein; PFAM: protein of unknown function DUF305; SPTR: C1YHS8 Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF305)
YP_003678157.1	KEGG: tfu:Tfu_0640 hypothetical protein; SPTR: C1YHS7  uncharacterized protein; PFAM: protein of unknown function (DUF3105)
YP_003678158.1	KEGG: tfu:Tfu_0641 hypothetical protein; SPTR: C1YHS6  uncharacterized protein; PFAM: protein of unknown function (DUF3515)
YP_003678159.1	InterPro IPR019887:IPR011008; KEGG: tfu:Tfu_0642 AsnC family transcriptional regulator; PFAM: transcription regulator, AsnC-type-like; SPTR: C1YHS5 AsnC family transcriptional regulator; PFAM: AsnC family
YP_003678160.1	COGs: COG0611 thiamine monophosphate kinase; InterPro IPR016188:IPR010918:IPR000728:IPR006283; KEGG: tfu:Tfu_0643 thiamine monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; PRIAM: thiamine-phosphate kinase; SPTR: C1YHS4 thiamine-phosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase
YP_003678161.1	InterPro IPR008965:IPR012291:IPR001919; KEGG: tfu:Tfu_0644 cellulose-binding family II protein; PFAM: cellulose-binding family II; SMART: cellulose-binding family II; SPTR: C1YHS3  cellulose binding protein; PFAM: cellulose binding domain
YP_003678162.1	COGs: COG0227 ribosomal protein L28; InterPro IPR001383; KEGG: tfu:Tfu_0645 50S ribosomal protein L28; PFAM: ribosomal protein L28; SPTR: Q47S84 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal L28 family; TIGRFAM: ribosomal protein L28
YP_003678163.1	COGs: COG1200 RecG-like helicase; InterProIPR016027:IPR004365:IPR011545:IPR001650:IPR 014001:IPR014021; KEGG: tfu:Tfu_0646 ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase; nucleic acid binding OB-fold tRNA/helicase-type; helicase; SMART: DEAD-like helicase ; helicase; SPTR: C1YHS2 ATP-dependent DNA helicase RecG; PFAM: Helicase conserved C-terminal domain; OB-fold nucleic acid binding domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG
YP_003678164.1	COGs: COG0742 N6-adenine-specific methylase; InterPro IPR016065:IPR004398:IPR002052; KEGG: sro:Sros_7999 hypothetical protein; PFAM: protein of unknown function methylase SPTR: C1YHS1  methyltransferase; TIGRFAM: methyltransferase; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family
YP_003678165.1	COGs: COG0669 phosphopantetheine adenylyltransferase; InterPro IPR014729:IPR004820:IPR004821:IPR001980; KEGG: tfu:Tfu_0648 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Pantetheine-phosphate adenylyltransferase; SPTR: C1YHS0 phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain
YP_003678166.1	COGs: COG1399 metal-binding possibly nucleic acid-binding protein; InterPro IPR003772; KEGG: tfu:Tfu_0649 hypothetical protein; PFAM: protein of unknown function DUF177; SPTR: C1YHR9 Predicted metal-binding protein, possibly nucleic-acid binding; PFAM: Uncharacterized ACR, COG1399
YP_003678167.1	InterPro IPR002677; KEGG: tfu:Tfu_0650 50S ribosomal protein L32; PFAM: ribosomal L32p protein; SPTR: C1YHR8 50S ribosomal protein L32P; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein family; TIGRFAM: ribosomal protein L32
YP_003678168.1	COGs: COG0571 dsRNA-specific ribonuclease; InterPro IPR000999:IPR014720:IPR001159:IPR011907; KEGG: tfu:Tfu_0651 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; PRIAM: ribonuclease III; SMART: ribonuclease III; double-stranded RNA binding domain protein; SPTR: C1YHR7 RNAse III; TIGRFAM: ribonuclease III; PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial
YP_003678169.1	COGs: COG0266 Formamidopyrimidine-DNA glycosylase; InterProIPR012319:IPR010979:IPR015886:IPR010663:IPR 000191:IPR000214; KEGG: ami:Amir_5962 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding; zinc finger Fpg domain protein; PRIAM: DNA-formamidopyrimidine glycosylase; SPTR: C1YHR6 DNA glycosylase; TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg)
YP_003678170.1	COGs: COG1254 acylphosphatase; InterPro IPR001792:IPR017968; KEGG: tfu:Tfu_0653 acylphosphatase; PFAM: acylphosphatase; SPTR: C1YHR5 acylphosphatase; PFAM: acylphosphatase
YP_003678171.1	KEGG: sro:Sros_7992 hypothetical protein; SPTR: C1YHR4  uncharacterized protein
YP_003678172.1	COGs: COG1196 chromosome segregation ATPase; InterPro IPR010935:IPR003395:IPR011890; KEGG: tfu:Tfu_0655 condensin subunit Smc; PFAM: SMC domain protein; SMCs flexible hinge domain protein; SPTR: C1YHR3 Condensin subunit Smc; TIGRFAM: chromosome segregation protein SMC; PFAM: RecF/RecN/SMC N terminal domain; SMC proteins Flexible Hinge Domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type
YP_003678173.1	InterPro IPR000209:IPR003137; KEGG: scl:sce3689 subtilisin like protease; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; SPTR: C1YHR1 Subtilisin-like serine protease; PFAM: PA domain; Fn3-like domain (DUF1034); peptidase inhibitor I9; Subtilase family
YP_003678174.1	COGs: COG0614 ABC-type Fe3+-hydroxamate transporter periplasmic component; InterPro IPR002491; KEGG: tfu:Tfu_0656 ABC Fe3+-hydroxamate transporter substrate-binding protein; PFAM: periplasmic binding protein; SPTR: C1YHR0 ABC-type Fe3+-hydroxamate transporter periplasmic component; PFAM: Periplasmic binding protein
YP_003678175.1	COGs: COG0609 ABC-type Fe3+-siderophore transporter permease; InterPro IPR000522; KEGG: tfu:Tfu_0657 ABC-type transporter permease; PFAM: transporter permease; SPTR: C1YHQ9 ABC-type Fe3+-siderophore transporter permease; PFAM: FecCD transport family
YP_003678176.1	COGs: COG0552 Signal recognition particle GTPase; InterPro IPR013822:IPR004390:IPR000897:IPR003593; KEGG: tfu:Tfu_0658 signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA; SPTR: C1YHQ8 Signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY
YP_003678177.1	COGs: COG0004 Ammonia permease; InterPro IPR001905:IPR018047; KEGG: tfu:Tfu_0659 ammonium transporter; PFAM: ammonium transporter; SPTR: C1YHQ7 Ammonium transporter; TIGRFAM: ammonium transporter; PFAM: Ammonium transporter Family; TIGRFAM: ammonium transporter
YP_003678178.1	KEGG: tfu:Tfu_0660 hypothetical protein; SPTR: C1YHQ6  uncharacterized protein
YP_003678179.1	COGs: COG0541 Signal recognition particle GTPase; InterProIPR004125:IPR013822:IPR000897:IPR003593:IPR 004780; KEGG: tfu:Tfu_0661 signal recognition particle subunit FFH/SRP54 (SRP54); PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; SMART: ATPase AAA; SPTR: C1YHQ5 Signal recognition particle subunit FFH/SRP54 (Srp54); TIGRFAM: signal recognition particle protein; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein
YP_003678180.1	COGs: COG0228 ribosomal protein S16; InterPro IPR000307:IPR020592; KEGG: tfu:Tfu_0662 30S ribosomal protein S16P; PFAM: ribosomal protein S16; SPTR: C1YHQ4 30S ribosomal protein S16P; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; TIGRFAM: ribosomal protein S16
YP_003678181.1	COGs: COG1837 RNA-binding protein (contains KH domain); InterPro IPR009019:IPR004088; KEGG: tfu:Tfu_0663 hypothetical protein; SPTR: C1YHQ3 RNA-binding protein (KH domain); PFAM: KH domain
YP_003678182.1	COGs: COG0806 RimM protein required for 16S rRNA processing; InterPro IPR011033:IPR011961:IPR002676:IPR007903; KEGG: tcu:Tcur_3421 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; SPTR: C1YHQ2 16S rRNA processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM
YP_003678183.1	COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; InterPro IPR016009:IPR002649; KEGG: tfu:Tfu_0665 tRNA (guanine37-N(1)-) methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; PRIAM: tRNA (guanine-N(1)-)-methyltransferase; SPTR: C1YHQ1 tRNA (guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase
YP_003678184.1	COGs: COG0335 ribosomal protein L19; InterPro IPR001857; KEGG: tfu:Tfu_0666 50S ribosomal protein L19; PFAM: ribosomal protein L19; SPTR: C1YHQ0 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type
YP_003678185.1	COGs: COG0681 Signal peptidase I; InterPro IPR015927:IPR000223:IPR019759:IPR011056; KEGG: tfu:Tfu_0667 signal peptidase I; PFAM: peptidase S24/S26A/S26B, conserved region; PRIAM: Signal peptidase I; SPTR: C1YHP9 Signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S26; peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type
YP_003678186.1	InterPro IPR019592; KEGG: tfu:Tfu_0668 hypothetical protein; PFAM: protein of unknown function DUF2469; SPTR: C1YHP8  uncharacterized protein; PFAM: protein of unknown function (DUF2469)
YP_003678187.1	COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; InterPro IPR011335:IPR003509; KEGG: tfu:Tfu_0669 hypothetical protein; PFAM: protein of unknown function UPF0102; SPTR: C1YHP7 Predicted endonuclease related to Holliday junction resolvase; PFAM: Uncharacterised protein family UPF0102
YP_003678188.1	COGs: COG0606 ATPase with chaperone activity; InterPro IPR020568:IPR004482:IPR003593:IPR000523; KEGG: tfu:Tfu_0670 Mg chelatase-related protein; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; SPTR: C1YHP6 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein
YP_003678189.1	COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: tfu:Tfu_0671 smf protein; PFAM: SMF family protein; SPTR: C1YHP5 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA
YP_003678190.1	COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR013813:IPR006175; KEGG: tfu:Tfu_0673 hypothetical protein; PFAM: endoribonuclease L-PSP; SPTR: C1YHP4  translation initiation inhibitor, yjgF family; PFAM: endoribonuclease L-PSP
YP_003678191.1	COGs: COG4974 Site-specific recombinase XerD; InterProIPR011010:IPR010998:IPR013762:IPR004107:IPR 002104; KEGG: tfu:Tfu_0674 site-specific tyrosine recombinase XerC; PFAM: integrase family protein; integrase; SPTR: C1YHP3 Tyrosine recombinase XerC subunit; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_003678192.1	COGs: COG0052 ribosomal protein S2; InterPro IPR018130:IPR001865:IPR005706; KEGG: tfu:Tfu_0676 30S ribosomal protein S2; PFAM: ribosomal protein S2; SPTR: C1YHP1 30S ribosomal protein S2P; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type
YP_003678193.1	COGs: COG0264 translation elongation factor Ts; InterProIPR014039:IPR018101:IPR001816:IPR000449:IPR 009060; KEGG: tfu:Tfu_0677 elongation factor Ts; PFAM: translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; SPTR: C1YHP0 Elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts
YP_003678194.1	SPTR: C1YHN9  uncharacterized protein
YP_003678195.1	COGs: COG0528 Uridylate kinase; InterPro IPR001048:IPR015963:IPR011817; KEGG: tfu:Tfu_0678 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: UMP kinase; SPTR: C1YHN8 Uridylate kinase; TIGRFAM: uridylate kinase; PFAM: amino acid kinase family; TIGRFAM: uridylate kinase
YP_003678196.1	COGs: COG0233 ribosome recycling factor; InterPro IPR002661; KEGG: tfu:Tfu_0679 ribosome recycling factor; PFAM: ribosome recycling factor; SPTR: C1YHN7 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; TIGRFAM: ribosome recycling factor
YP_003678197.1	COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: tfu:Tfu_0680 phosphatidate cytidylyltransferase; PFAM: phosphatidate cytidylyltransferase; SPTR: C1YHG5 CDP-diglyceride synthetase; PFAM: Cytidylyltransferase family
YP_003678198.1	COGs: COG0436 aspartate/tyrosine/aromatic aminotransferase; InterPro IPR015424:IPR015421:IPR004839:IPR001176; KEGG: tfu:Tfu_0568 aminotransferase; PFAM: aminotransferase class I and II; SPTR: C1YHG4 Succinyldiaminopimelate aminotransferase; PFAM: aminotransferase class I and II
YP_003678199.1	COGs: COG0531 amino acid transporter; InterPro IPR004841:IPR002293; KEGG: svi:Svir_20300 amino acid transporter; PFAM: amino acid permease-associated region; SPTR: C1YHG3 amino acid transporter; PFAM: amino acid permease
YP_003678200.1	InterPro IPR016181:IPR000182; KEGG: sro:Sros_7218 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YHG2 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003678201.1	COGs: COG0296 1 4-alpha-glucan branching enzyme; InterProIPR017853:IPR014756:IPR013783:IPR013781:IPR 013780:IPR004193:IPR006047:IPR006048:IPR006589:IPR006407; KEGG: tfu:Tfu_0582 glycogen branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; SPTR: C1YHG1 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase, C-terminal all-beta domain; carbohydrate-binding module 48 (Isoamylase N-terminal domain); alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase
YP_003678202.1	COGs: COG3281 Uncharacterized protein probably involved in trehalose biosynthesis; InterPro IPR002575; KEGG: tfu:Tfu_0583  pep2 protein; PFAM: aminoglycoside phosphotransferase; SPTR: C1YHG0 Uncharacterized protein, probably involved in trehalose biosynthesis; PFAM: phosphotransferase enzyme family; TIGRFAM: trehalose synthase-fused probable maltokinase
YP_003678203.1	COGs: COG0366 glycosidase; InterProIPR006589:IPR012810:IPR006047:IPR013781:IPR 017853; KEGG: tfu:Tfu_0584 trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: C1YHF9 Trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase, catalytic domain; TIGRFAM: trehalose synthase
YP_003678204.1	COGs: COG0366 glycosidase; InterPro IPR017853:IPR013781:IPR006047:IPR006589; KEGG: tfu:Tfu_0585 alpha amylase domain-containing protein; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: C1YHF8 glycosidase; PFAM: alpha amylase, catalytic domain; Domain of unknown function (DUF3416)
YP_003678205.1	COGs: COG0744 membrane carboxypeptidase (penicillin-binding protein); InterPro IPR012338:IPR001264:IPR001460; KEGG: tfu:Tfu_0109 PASTA; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; SPTR: C1YHF7 membrane carboxypeptidase (Penicillin-binding protein); PFAM: Penicillin binding protein transpeptidase domain; transglycosylase
YP_003678206.1	COGs: COG4721 membrane protein; InterPro IPR017195; KEGG: tfu:Tfu_0587 ABC transporter permease; PFAM: ABC-type thiamin-related transporter permease 1, predicted; SPTR: C1YHF6 Predicted membrane protein, COG4721; PFAM: ABC-type cobalt transporter permease component
YP_003678207.1	COGs: COG1123 ATPase components of various ABC-type transporters contain duplicated ATPase; InterPro IPR017871:IPR003439:IPR003593; KEGG: tfu:Tfu_0588 ATPase; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YHF5 Cobalt transporter ATP-binding subunit; PFAM: ABC transporter; TIGRFAM: cobalt transporter ATP-binding subunit
YP_003678208.1	COGs: COG0619 ABC-type cobalt transporter permease component CbiQ and related transporter; InterPro IPR003339; KEGG: tfu:Tfu_0589 ABC-type cobalt transporter; PFAM: cobalt transporter; SPTR: C1YHF4 ABC-type cobalt transporter permease CbiQ; PFAM: Cobalt transporter
YP_003678209.1	COGs: COG1024 enoyl-CoA hydratase/carnithine racemase; InterPro IPR018376:IPR001753; KEGG: tfu:Tfu_0590 short chain enoyl-CoA hydratase; PFAM: enoyl-CoA hydratase/isomerase; SPTR: C1YHF3 Short chain enoyl-CoA hydratase; PFAM: enoyl-CoA hydratase/isomerase family
YP_003678210.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR008271:IPR011009:IPR017442:IPR017441:IPR 000719; KEGG: tfu:Tfu_0592 tyrosine protein kinase:serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SPTR: C1YHF2 protein kinase family protein; PFAM: protein kinase domain
YP_003678211.1	COGs: COG2086 electron transfer flavoprotein beta subunit; InterPro IPR014729:IPR014730:IPR012255; KEGG: tfu:Tfu_0593 electron transfer flavoprotein subunit beta; PFAM: electron transfer flavoprotein alpha/beta-subunit; SPTR: C1YHF1 electron transfer flavoprotein, beta subunit; PFAM: electron transfer flavoprotein domain
YP_003678212.1	COGs: COG2025 electron transfer flavoprotein alpha subunit; InterProIPR018206:IPR014729:IPR001308:IPR014730:IPR 014731; KEGG: tfu:Tfu_0594 electron transfer flavoprotein, subunit alpha; PFAM: electron transfer flavoprotein subunit alpha ; electron transfer flavoprotein alpha/beta-subunit; SMART: electron transfer flavoprotein alpha/beta-subunit; SPTR: C1YHF0 electron transfer flavoprotein, alpha subunit; PFAM: electron transfer flavoprotein domain; electron transfer flavoprotein FAD-binding domain
YP_003678213.1	COGs: COG3285 eukaryotic-type DNA primase; InterPro IPR014145:IPR002755; KEGG: sco:SCO6498 hypothetical protein; PFAM: DNA primase small subunit; SPTR: C1YHE9 DNA polymerase LigD, polymerase domain; TIGRFAM: DNA polymerase LigD, polymerase domain protein; TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain
YP_003678214.1	KEGG: svi:Svir_19520 hypothetical protein; SPTR: C1YHE8  uncharacterized protein
YP_003678215.1	InterPro IPR010427; KEGG: svi:Svir_19530 alpha/beta hydrolase of unknown function (DUF1023); PFAM: protein of unknown function DUF1023; SPTR: C1YHE7  uncharacterized protein; PFAM: alpha/beta hydrolase of unknown function (DUF1023)
YP_003678216.1	KEGG: lca:LSEI_1094 Zn-dependent protease; SPTR: C1YHE6  uncharacterized protein
YP_003678217.1	COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644:IPR002550:IPR005170; KEGG: tfu:Tfu_1263 CBS; PFAM: protein of unknown function DUF21; hypothetical protein; transporter-associated region; SMART: hypothetical protein; SPTR: C1YHE5 CBS domain-containing protein; PFAM: CBS domain; Domain of unknown function DUF21; transporter associated domain
YP_003678218.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016161:IPR015590:IPR016160:IPR016162; KEGG: art:Arth_1894 betaine-aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase; SPTR: C1YHE4 4-hydroxybenzaldehyde dehydrogenase; PFAM: aldehyde dehydrogenase family
YP_003678219.1	InterPro IPR013216; KEGG: tfu:Tfu_2465 hypothetical protein; PFAM: methyltransferase type 11; SPTR: C1YHE3 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain
YP_003678220.1	COGs: COG2226 methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: tfu:Tfu_2464 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase type 11; SPTR: C1YHE2 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain
YP_003678221.1	KEGG: tfu:Tfu_2463 hypothetical protein; SPTR: C1YHE1  uncharacterized protein
YP_003678222.1	COGs: COG1835 acyltransferase; InterPro IPR002656; KEGG: tfu:Tfu_2458  acyltransferase; PFAM: acyltransferase; SPTR: C1YHE0 Predicted acyltransferase; PFAM: acyltransferase family
YP_003678223.1	KEGG: tfu:Tfu_2459 hypothetical protein; SPTR: C1YHD9  uncharacterized protein; PFAM: protein of unknown function (DUF3068)
YP_003678224.1	COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537; KEGG: tfu:Tfu_2460 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; PFAM: UbiA prenyltransferase; SPTR: C1YHD8 4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; PFAM: UbiA prenyltransferase family
YP_003678225.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR016166:IPR016168:IPR006094; KEGG: tfu:Tfu_2461  oxidoreductase; PFAM: FAD linked oxidase; SPTR: C1YHD7 FAD/FMN-dependent dehydrogenase; PFAM: D-arabinono-1,4-lactone oxidase; FAD binding domain
YP_003678226.1	COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR016040:IPR002198:IPR002347; KEGG: tfu:Tfu_2462  short chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YHD6 Short-chain alcohol dehydrogenase; PFAM: short chain dehydrogenase
YP_003678227.1	COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR016196:IPR011701; KEGG: sro:Sros_8054 Na+/melibiose symporter and related transporter-like protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YHD5 Na+/melibiose symporter-like transporter; PFAM: Major Facilitator Superfamily
YP_003678228.1	KEGG: tfu:Tfu_2448 hypothetical protein; SPTR: C1YHD4  uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2236)
YP_003678229.1	KEGG: tfu:Tfu_2448 hypothetical protein; SPTR: C1YHD3  uncharacterized protein
YP_003678230.1	COGs: COG2229 GTPase; InterPro IPR004130; KEGG: tfu:Tfu_2447  ATP/GTP-binding protein; PFAM: protein of unknown function ATP binding; SPTR: C1YHD2 Predicted GTPase, COG2229; PFAM: Conserved hypothetical ATP binding protein
YP_003678231.1	InterPro IPR007995; KEGG: tfu:Tfu_2446 hypothetical protein; PFAM: protein of unknown function DUF742; SPTR: C1YHD1  uncharacterized protein; PFAM: protein of unknown function (DUF742)
YP_003678232.1	COGs: COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid; InterPro IPR004942; KEGG: tfu:Tfu_2445 hypothetical protein; PFAM: Roadblock/LC7 family protein; SPTR: C1YHD0 Uncharacterized conserved protein; PFAM: Roadblock/LC7 domain
YP_003678233.1	InterPro IPR003594:IPR003660; KEGG: tfu:Tfu_2444 ATP-binding region, ATPase-like; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YHC9 HAMP domain-containing histidine kinase; PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; nitrate and nitrite sensing
YP_003678234.1	KEGG: sen:SACE_2926  glycopeptide antibiotics resistance protein; SPTR: C1YHC8  uncharacterized protein
YP_003678235.1	KEGG: tfu:Tfu_2443 hypothetical protein; SPTR: C1YHC7  uncharacterized protein; PFAM: protein of unknown function (DUF3592)
YP_003678236.1	COGs: COG1309 transcriptional regulator; InterProIPR001647:IPR012287:IPR015893:IPR011075:IPR 009057; KEGG: sco:SCO2100 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YHC6 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003678237.1	COGs: COG1511 membrane protein; InterPro IPR017500:IPR017501; KEGG: sma:SAV_6105 hypothetical protein; SPTR: C1YHC5 YhgE/Pip-like protein; TIGRFAM: YhgE/Pip C-terminal domain protein; YhgE/Pip N-terminal domain protein; TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats; YhgE/Pip C-terminal domain; YhgE/Pip N-terminal domain
YP_003678238.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR003439; KEGG: sro:Sros_1517 ABC-type multidrug transport system ATPase component-like protein; PFAM: ABC transporter; SPTR: C1YHC4 ABC-type multidrug transporter ATPase component; PFAM: ABC transporter
YP_003678239.1	COGs: COG1515 deoxyinosine 3'endonuclease (endonuclease V); InterPro IPR007581; KEGG: tfu:Tfu_1400 endonuclease V; PFAM: endonuclease V; PRIAM: deoxyribonuclease V; SPTR: C1YHC3 endonuclease V; PFAM: endonuclease V
YP_003678240.1	COGs: COG0516 IMP dehydrogenase/GMP reductase; InterProIPR013785:IPR001093:IPR000644:IPR005991:IPR 018529; KEGG: tfu:Tfu_2440 inosine 5-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; hypothetical protein; PRIAM: IMP dehydrogenase; SMART: hypothetical protein; SPTR: C1YHC2 IMP dehydrogenase family protein; TIGRFAM: IMP dehydrogenase family protein; PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; IMP dehydrogenase family protein
YP_003678241.1	InterPro IPR000462; KEGG: tfu:Tfu_2439 hypothetical protein; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: C1YHC1 phosphatidylglycerophosphate synthase; PFAM: CDP-alcohol phosphatidyltransferase
YP_003678242.1	COGs: COG3594 Fucose 4-O-acetylase and related acetyltransferase; InterPro IPR002656; KEGG: sro:Sros_0364 hypothetical protein; PFAM: acyltransferase; SPTR: C1YHC0 acetyltransferase, fucose-4-O-acetylase; PFAM: acyltransferase family
YP_003678243.1	COGs: COG1473 metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR011650:IPR002933:IPR010168; KEGG: tfu:Tfu_2437 peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; PRIAM: Hippurate hydrolase; SPTR: C1YHB9 Amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain; TIGRFAM: amidohydrolase
YP_003678244.1	InterPro IPR001915; KEGG: tfu:Tfu_2436 hypothetical protein; PFAM: peptidase M48 Ste24p; SPTR: C1YHB8 Zn-dependent protease with chaperone function; PFAM: peptidase family M48
YP_003678245.1	COGs: COG0480 translation elongation factors (GTPase); InterProIPR020568:IPR005517:IPR000640:IPR005225:IPR 009000:IPR014721:IPR009022:IPR000795; KEGG: tcu:Tcur_2099 small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain IV; elongation factor G domain protein; SMART: elongation factor G domain IV; elongation factor G domain protein; SPTR: C1YHB7 translation elongation factor 2 (EF-2/EF-G); TIGRFAM: small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_003678246.1	COGs: COG1266 metal-dependent membrane protease; InterPro IPR003675; KEGG: sro:Sros_4587 protease CAAX amino terminal family; PFAM: hypothetical protein; SPTR: C1YHB6 Predicted metal-dependent membrane protease; PFAM: CAAX amino terminal protease family
YP_003678247.1	KEGG: tfu:Tfu_2435  hydrolase; SPTR: C1YHB5  uncharacterized protein
YP_003678248.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: sen:SACE_6356  transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YHB4 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003678249.1	InterPro IPR017909; KEGG: tfu:Tfu_2434 hypothetical protein; SPTR: C1YHB3  uncharacterized protein
YP_003678250.1	COGs: COG0242 N-formylmethionyl-tRNA deformylase; InterPro IPR000181; KEGG: tfu:Tfu_2433 peptide deformylase; PFAM: formylmethionine deformylase; PRIAM: peptide deformylase; SPTR: C1YHB2 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: polypeptide deformylase; TIGRFAM: peptide deformylase
YP_003678251.1	InterPro IPR002934; KEGG: tfu:Tfu_2432 hypothetical protein; PFAM: DNA polymerase beta domain protein region; SPTR: C1YHB1 nucleotidyltransferase family protein; PFAM: nucleotidyltransferase domain
YP_003678252.1	KEGG: tfu:Tfu_2430 hypothetical protein; SPTR: C1YHB0  uncharacterized protein; PFAM: CbiX
YP_003678253.1	COGs: COG3570 Streptomycin 6-kinase; InterPro IPR006748:IPR011009; KEGG: tfu:Tfu_2429 streptomycin 6-kinase; PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; SPTR: C1YHA9 Streptomycin 6-kinase; PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase
YP_003678254.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: sco:SCO5872 turgor pressure regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein; SPTR: C1YHA8 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal
YP_003678255.1	COGs: COG2205 osmosensitive K+ channel histidine kinase; InterProIPR003594:IPR009082:IPR014729:IPR003852:IPR 006016:IPR003661:IPR005467:IPR004358; KEGG: sgr:SGR_1661  two-component system sensor kinase; PFAM: osmosensitive K channel His kinase sensor; UspA domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: C1YHA7 Sensor protein; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; osmosensitive K+ channel His kinase sensor domain; Universal stress protein family
YP_003678256.1	KEGG: fre:Franean1_7287 serine/threonine protein kinase; SPTR: C1YHN6  uncharacterized protein
YP_003678257.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR016166:IPR016164:IPR016167:IPR006094:IPR 004113; KEGG: mpa:MAP2004 hypothetical protein; PFAM: FAD linked oxidase domain protein; PRIAM: alkylglycerone-phosphate synthase; SPTR: C1YHN5 FAD/FMN-dependent dehydrogenase; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain
YP_003678258.1	InterPro IPR011075:IPR009057:IPR012287:IPR001647; KEGG: mab:MAB_3883c TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YHN4 transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003678259.1	COGs: COG0578 glycerol-3-phosphate dehydrogenase; InterPro IPR000447:IPR006076; KEGG: rop:ROP_67480  glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: C1YHA6 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_003678260.1	InterPro IPR003594; KEGG: tcu:Tcur_4370  signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: C1YHA5 histidine kinase
YP_003678261.1	COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: stp:Strop_2582 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: C1YHA4 Predicted Na+-dependent transporter; PFAM: Sodium Bile acid symporter family
YP_003678262.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR000792:IPR001789:IPR011991:IPR011006:IPR 016032; KEGG: sro:Sros_4416 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; SPTR: C1YHA3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003678263.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: sen:SACE_6703 two-component system sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; SPTR: C1YHA2 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003678264.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: ami:Amir_2410 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PRIAM: histidine kinase; SMART: ATP-binding region ATPase domain protein; SPTR: C1YHA1 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003678265.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR003439:IPR003593; KEGG: xce:Xcel_0096 ABC transporter related protein; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YH99 ABC-type multidrug transporter ATPase component; PFAM: ABC transporter
YP_003678266.1	KEGG: gym:GYMC10_3229 hypothetical protein; SPTR: C1YH98  uncharacterized protein
YP_003678267.1	COGs: COG4894 conserved hypothetical protein; InterPro IPR007612; KEGG: sma:SAV_4384 hypothetical protein; PFAM: protein of unknown function DUF567; SPTR: C1YH97 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF567)
YP_003678268.1	COGs: COG0847 DNA polymerase III subunit epsilon and related 3'-5' exonuclease; InterPro IPR012337:IPR006055:IPR013520; KEGG: sgr:SGR_1422 DNA polymerase III subunit epsilon; PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; SPTR: C1YH96 DNA polymerase III epsilon subunit-like 3'-5' exonuclease; PFAM: exonuclease
YP_003678269.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: tcu:Tcur_3942 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: C1YH95 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain
YP_003678270.1	COGs: COG0018 Arginyl-tRNA synthetase; InterPro IPR009080:IPR008909; KEGG: tfu:Tfu_2426 arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain protein; SPTR: C1YH94 Arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain
YP_003678271.1	COGs: COG0019 diaminopimelate decarboxylase; InterPro IPR000183:IPR002986:IPR009006; KEGG: tfu:Tfu_2425 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: C1YH93 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: pyridoxal-dependent decarboxylase, C-terminal sheet domain; pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase
YP_003678272.1	COGs: COG0460 homoserine dehydrogenase; InterProIPR001342:IPR016040:IPR002912:IPR019811:IPR 016204:IPR005106; KEGG: tfu:Tfu_2424 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; PRIAM: homoserine dehydrogenase; SPTR: C1YH92 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase, NAD binding domain; ACT domain
YP_003678273.1	COGs: COG0498 threonine synthase; InterPro IPR000634:IPR001926:IPR004450; KEGG: tfu:Tfu_2423 threonine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; SPTR: C1YH91 L-threonine synthase; TIGRFAM: threonine synthase; PFAM: pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase
YP_003678274.1	COGs: COG0083 homoserine kinase; InterProIPR006203:IPR014721:IPR020568:IPR000870:IPR 006204:IPR013750; KEGG: tfu:Tfu_2422 homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein; PRIAM: homoserine kinase; SPTR: C1YH90 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase
YP_003678275.1	COGs: COG1158 transcription termination factor; InterProIPR018260:IPR011129:IPR003593:IPR004665:IPR 011112:IPR011113:IPR000194; KEGG: tfu:Tfu_2421 transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; Rho termination factor RNA-binding; Rho termination factor domain protein; SMART: Cold shock protein; ATPase AAA; SPTR: C1YH89 transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho
YP_003678276.1	COGs: COG1620 L-lactate permease; InterPro IPR003804; KEGG: svi:Svir_33840 L-lactate transport; PFAM: L-lactate permease; SPTR: C1YH88 L-lactate transport; TIGRFAM: L-lactate transport; PFAM: L-lactate permease; TIGRFAM: L-lactate transport
YP_003678277.1	COGs: COG0254 ribosomal protein L31; InterPro IPR002150; KEGG: sma:SAV_2913 50S ribosomal protein L31; PFAM: ribosomal protein L31; SPTR: C1YH87 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; TIGRFAM: ribosomal protein L31
YP_003678278.1	COGs: COG0216 protein chain release factor A; InterPro IPR000352:IPR004373:IPR005139; KEGG: tfu:Tfu_2419 peptide chain release factor 1; PFAM: class I peptide chain release factor; PCRF domain protein; SPTR: C1YH86 Bacterial peptide chain release factor 1 (BRF-1); TIGRFAM: peptide chain release factor 1; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1
YP_003678279.1	COGs: COG2890 methylase of polypeptide chain release factors; InterPro IPR019874:IPR004556:IPR007848:IPR002052; KEGG: tfu:Tfu_2418 modification methylase HemK; PFAM: methyltransferase small; SPTR: C1YH85 protein-(glutamine-N5) methyltransferase, release factor-specific; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small domain; TIGRFAM: HemK family  methylases; protein-(glutamine-N5) methyltransferase, release factor-specific
YP_003678280.1	COGs: COG0009  translation factor (SUA5); InterPro IPR006070:IPR017945:IPR004388; KEGG: tfu:Tfu_2417 translation factor SUA5; PFAM: SUA5/yciO/yrdC domain; SPTR: C1YH84 translation factor SUA5; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein
YP_003678281.1	COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018480:IPR018481; KEGG: tfu:Tfu_2416  teichoic acid linkage unit synthesis (synthesis of undecaprenylpyrophosphate-N-aetylglucosamine ); PFAM: glycosyl transferase, family 4, conserved region; SPTR: C1YH83 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; PFAM: glycosyl transferase family 4
YP_003678282.1	KEGG: tfu:Tfu_2415 hypothetical protein; SPTR: C1YH82  uncharacterized protein
YP_003678283.1	KEGG: fra:Francci3_3714 hypothetical protein; SPTR: C1YH81  uncharacterized protein
YP_003678284.1	COGs: COG0356 F0F1-type ATP synthase subunit a; InterPro IPR000568; KEGG: tfu:Tfu_2413 H+-transporting two-sector ATPase, A subunit; PFAM: H+transporting two-sector ATPase alpha; SPTR: C1YH80 ATP synthase subunit a; TIGRFAM: ATP synthase F0 subunit alpha; PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
YP_003678285.1	InterPro IPR002379:IPR000454:IPR005953:IPR020537; KEGG: tfu:Tfu_2412 ATP synthase F0 C subunit; PFAM: H+transporting two-sector ATPase C subunit; SPTR: C1YH79 ATP synthase subunit c; TIGRFAM: ATP synthase F0 C subunit; PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c
YP_003678286.1	COGs: COG0711 F0F1-type ATP synthase subunit b; InterPro IPR005864:IPR002146; KEGG: tfu:Tfu_2411 ATP synthase F0 subunit B; PFAM: H+transporting two-sector ATPase B/B' subunit; SPTR: C1YH78 ATP synthase subunit b; TIGRFAM: ATP synthase F0 subunit beta; PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b
YP_003678287.1	COGs: COG0712 F0F1-type ATP synthase subunit delta (mitochondrial oligomycin sensitivity protein); InterPro IPR000711; KEGG: tfu:Tfu_2410 F0F1 ATP synthase subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; SPTR: C1YH77 ATP synthase; TIGRFAM: ATP synthase F1 subunit delta; PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 subunit delta
YP_003678288.1	COGs: COG0056 F0F1-type ATP synthase alpha subunit; InterProIPR018118:IPR004100:IPR000793:IPR000194:IPR 005294:IPR020003; KEGG: tfu:Tfu_2409 F0F1 ATP synthase subunit alpha; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; PRIAM: H(+)-transporting two-sector ATPase; SPTR: C1YH76 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1 subunit alpha; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 subunit alpha
YP_003678289.1	COGs: COG0224 F0F1-type ATP synthase gamma subunit; InterPro IPR000131; KEGG: tfu:Tfu_2408 H+-transporting two-sector ATPase, subunit gamma; PFAM: H+transporting two-sector ATPase gamma subunit; SPTR: C1YH75 ATP synthase gamma chain; TIGRFAM: ATP synthase F1 gamma subunit; PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 subunit gamma
YP_003678290.1	COGs: COG0055 F0F1-type ATP synthase beta subunit; InterProIPR020003:IPR000793:IPR018118:IPR003593:IPR 005722:IPR004100:IPR000194; KEGG: tfu:Tfu_2407 F0F1 ATP synthase subunit beta; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; PRIAM: H(+)-transporting two-sector ATPase; SMART: ATPase AAA; SPTR: C1YH74 ATP synthase F1 subcomplex subunit beta; TIGRFAM: ATP synthase F1 beta subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 subunit beta
YP_003678291.1	COGs: COG0355 F0F1-type ATP synthase subunit epsilon (mitochondrial subunit delta); InterPro IPR020546:IPR001469; KEGG: tfu:Tfu_2406 H+-transporting two-sector ATPase, delta/subunit epsilon; PFAM: ATPase, F1 complex, delta/subunit epsilon-like; SPTR: C1YH73 ATP synthase F1 subcomplex subunit epsilon; TIGRFAM: ATP synthase F1 subunit epsilon; PFAM: ATP synthase, delta/Epsilon chain, beta-sandwich domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria)
YP_003678292.1	InterPro IPR019675; KEGG: tfu:Tfu_2405  secreted/membrane protein; PFAM: protein of unknown function DUF2550; SPTR: C1YH72  uncharacterized protein; PFAM: protein of unknown function (DUF2550)
YP_003678293.1	COGs: COG0011 conserved hypothetical protein; InterPro IPR002767:IPR016198; KEGG: sgr:SGR_2128 hypothetical protein; PFAM: protein of unknown function DUF77; SPTR: C1YH71  uncharacterized protein; PFAM: Domain of unknown function DUF77; TIGRFAM: conserved hypothetical protein TIGR00106
YP_003678294.1	KEGG: ank:AnaeK_1843 SpoIID/LytB domain protein; SPTR: C1YH70  uncharacterized protein
YP_003678295.1	COGs: COG0475 Kef-type K+ transporters membrane components; InterPro IPR006153; KEGG: nml:Namu_3791 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; SPTR: C1YH69 Kef-type K+ transport system, membrane component; PFAM: Sodium/hydrogen exchanger family
YP_003678296.1	KEGG: svi:Svir_02890 hypothetical protein; SPTR: C1YH68  uncharacterized protein
YP_003678297.1	COGs: COG2096 conserved hypothetical protein; InterPro IPR017858:IPR016030:IPR002779; KEGG: tfu:Tfu_2404 ATP:cob(I)alamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; SPTR: C1YH67 ATP:cob(I)alamin adenosyltransferase; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase
YP_003678298.1	COGs: COG2234 aminopeptidase; InterPro IPR003137:IPR007484; KEGG: tfu:Tfu_2403 aminopeptidase Y; PFAM: peptidase M28; protease-associated PA domain protein; PRIAM: aminopeptidase Y; SPTR: C1YH66 Predicted aminopeptidase; PFAM: PA domain; peptidase family M28
YP_003678299.1	InterPro IPR012551; KEGG: tfu:Tfu_2402 hypothetical protein; PFAM: protein of unknown function DUF1707; SPTR: C1YH65  uncharacterized protein; PFAM: Predicted membrane protein (DUF2154); Domain of unknown function (DUF1707)
YP_003678300.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR000792:IPR001789:IPR011991:IPR011006:IPR 016032; KEGG: sro:Sros_1684 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YH64 Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003678301.1	COGs: COG4585 Signal transduction histidine kinase; InterProIPR005467:IPR003594:IPR017205:IPR004358:IPR 011712; KEGG: sro:Sros_1685 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PRIAM: histidine kinase; SMART: ATP-binding region ATPase domain protein; SPTR: C1YH63 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003678302.1	COGs: COG0842 ABC-type multidrug transporter permease; InterPro IPR000412:IPR013525; KEGG: saq:Sare_4005 ABC-2 type transporter; PFAM: ABC transporter; SPTR: C1YH62 ABC-type multidrug transporter permease; PFAM: ABC transporter
YP_003678303.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: sro:Sros_1687 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YH61 ABC-type multidrug transporter ATPase component; PFAM: ABC transporter
YP_003678304.1	COGs: COG1637 nuclease of the RecB family; InterPro IPR002793; KEGG: tfu:Tfu_2401 hypothetical protein; PFAM: protein of unknown function DUF91; SPTR: C1YH60 Predicted nuclease of the RecB family; PFAM: protein of unknown function DUF91
YP_003678305.1	KEGG: tfu:Tfu_2400 hypothetical protein; SPTR: C1YH59  uncharacterized protein
YP_003678306.1	COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR016040:IPR008927:IPR006108:IPR006176:IPR 013328; KEGG: tfu:Tfu_2399 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; PRIAM: 3-hydroxybutyryl-CoA dehydrogenase; SPTR: C1YH58 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YP_003678307.1	KEGG: tfu:Tfu_2398  ATP/GTP-binding protein, doubtful CDS; SPTR: C1YH57  uncharacterized protein
YP_003678308.1	COGs: COG2945 hydrolase of the alpha/beta superfamily; KEGG: tfu:Tfu_2397 hypothetical protein; SPTR: C1YH56 Predicted hydrolase of the alpha/beta superfamily
YP_003678309.1	KEGG: tfu:Tfu_2396  cellulose-binding protein; SPTR: C1YH55  uncharacterized protein; PFAM: DivIVA protein; TIGRFAM: DivIVA domain
YP_003678310.1	COGs: COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins; InterPro IPR004360:IPR017515; KEGG: tfu:Tfu_2395 methylmalonyl-CoA epimerase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YH54 methylmalonyl-CoA epimerase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase
YP_003678311.1	COGs: COG0183 acetyl-CoA acetyltransferase; InterPro IPR016039:IPR016038:IPR002155; KEGG: tfu:Tfu_2394 acetyl-CoA acetyltransferase; PRIAM: acetyl-CoA C-acetyltransferase; SPTR: C1YH53 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase, C-terminal domain; thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_003678312.1	COGs: COG1703  periplasmic protein kinase ArgK and related GTPase of G3E family; InterPro IPR005129:IPR003593; KEGG: sro:Sros_1698 LAO/AO transporter ATPase; PFAM: ArgK protein; SMART: AAA ATPase; SPTR: C1YH52 LAO/AO transporter ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; TIGRFAM: LAO/AO transporter ATPase
YP_003678313.1	InterPro IPR002711; KEGG: fal:FRAAL4530 hypothetical protein; PFAM: HNH endonuclease; SPTR: C1YH50 HNH endonuclease; PFAM: HNH endonuclease; Domain of unknown function DUF222
YP_003678314.1	COGs: COG3325 chitinase; InterProIPR003961:IPR001919:IPR001579:IPR012291:IPR 008957:IPR013781:IPR017853:IPR008965:IPR011583:IPR001223; KEGG: sro:Sros_7591 chitinase-like protein; PFAM: glycoside hydrolase family 18; cellulose-binding family II; Fibronectin type III domain protein; SMART: chitinase II; cellulose-binding family II; Fibronectin type III domain protein; SPTR: C1YH49 chitinase; PFAM: cellulose binding domain; glycosyl hydrolases family 18; Fibronectin type III domain
YP_003678315.1	COGs: COG3325 chitinase; InterProIPR001919:IPR001579:IPR012291:IPR013781:IPR 017853:IPR008965:IPR011583:IPR001223; KEGG: sgr:SGR_2458  chitinase; PFAM: glycoside hydrolase family 18; cellulose-binding family II; SMART: chitinase II; cellulose-binding family II; SPTR: C1YH48 chitinase; PFAM: cellulose binding domain; glycosyl hydrolases family 18
YP_003678316.1	COGs: COG1846 transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: tfu:Tfu_2393 regulatory protein, MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YH47 transcriptional regulator; PFAM: MarR family
YP_003678317.1	COGs: COG1884 methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR014348:IPR006099:IPR006098:IPR016176; KEGG: sco:SCO5415 isobutyryl-CoA mutase A; PFAM: methylmalonyl-CoA mutase; PRIAM: methylmalonyl-CoA mutase; SPTR: C1YH46 methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain
YP_003678318.1	COGs: COG3118 thioredoxin domain-containing protein; InterPro IPR012335:IPR012336; KEGG: tfu:Tfu_2392  thioredoxin; SPTR: C1YH45 thioredoxin domain-containing protein; PFAM: thioredoxin
YP_003678319.1	KEGG: tfu:Tfu_2391 hypothetical protein; SPTR: C1YH43  uncharacterized protein
YP_003678320.1	COGs: COG0281 Malic enzyme; InterPro IPR016040:IPR001891:IPR012301:IPR012302; KEGG: tfu:Tfu_2390 malate dehydrogenase (oxaloacetate decarboxylating); PFAM: malic protein NAD-binding; malic protein domain protein; PRIAM: malate dehydrogenase (oxaloacetate-decarboxylating); SPTR: C1YH42 Malic enzyme; PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain
YP_003678321.1	COGs: COG1678  transcriptional regulator protein; InterPro IPR003774; KEGG: tfu:Tfu_2389 hypothetical protein; PFAM: protein of unknown function DUF179; SPTR: C1YH41 Predicted transcriptional regulator, COG1678; PFAM: Uncharacterized ACR, COG1678
YP_003678322.1	KEGG: tfu:Tfu_2388 hypothetical protein; SPTR: C1YH40  uncharacterized protein; PFAM: protein of unknown function (DUF3039)
YP_003678323.1	InterPro IPR007331:IPR017909:IPR019948; KEGG: cgt:cgR_0461 hypothetical protein; PFAM: Htaa domain protein; Gram-positive anchor; SPTR: C1YH39 Htaa protein; PFAM: Htaa; TIGRFAM: LPXTG-motif cell wall anchor domain
YP_003678324.1	InterPro IPR019931; KEGG: tfu:Tfu_2387 hypothetical protein; SPTR: C1YH38  uncharacterized protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; TIGRFAM: LPXTG-motif cell wall anchor domain
YP_003678325.1	COGs: COG4558 ABC-type hemin transporter periplasmic component; InterPro IPR002491; KEGG: tfu:Tfu_2386 binding-protein-dependent transport lipoprotein; PFAM: periplasmic binding protein; SPTR: C1YH37 ABC-type hemin transporter periplasmic component; PFAM: Periplasmic binding protein
YP_003678326.1	COGs: COG0609 ABC-type Fe3+-siderophore transporter permease; InterPro IPR000522; KEGG: tfu:Tfu_2385 FecCD-family membrane transporter; PFAM: transporter permease; SPTR: C1YH36 ABC-type Fe3+-siderophore transporter permease; PFAM: FecCD transport family
YP_003678327.1	COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; InterPro IPR003439:IPR015863:IPR017871:IPR003593; KEGG: sco:SCO2274 hemin importer ATP-binding subunit; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YH35 ABC-type cobalamin/Fe3+-siderophore transporter ATPase component; PFAM: ABC transporter
YP_003678328.1	COGs: COG3764 Sortase (surface protein transpeptidase); InterPro IPR005754; KEGG: tfu:Tfu_2383 peptidase C60, sortase A and B; PFAM: peptidase C60 sortase A and B; SPTR: C1YH34 Sortase family protein, LPXTG-site transpeptidase; TIGRFAM: sortase family protein; PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein
YP_003678329.1	KEGG: tfu:Tfu_2382 hypothetical protein; SPTR: C1YH33  uncharacterized protein
YP_003678330.1	COGs: COG1061 DNA or RNA helicase of superfamily II; InterProIPR014021:IPR001650:IPR014001:IPR003593:IPR 006935; KEGG: tfu:Tfu_2381 ATPase; PFAM: type III restriction protein res subunit; SMART: DEAD-like helicase ; ATPase AAA; SPTR: C1YH32 DNA/RNA helicase, superfamily II; PFAM: type III restriction enzyme, res subunit
YP_003678331.1	InterPro IPR008754; KEGG: kse:Ksed_17060 Pregnancy-associated plasma protein-A; PFAM: peptidase M43B pregnancy-associated plasma-A; SPTR: C1YH31 Pregnancy-associated plasma protein-A; PFAM: Pregnancy-associated plasma protein-A
YP_003678332.1	COGs: COG0180 tryptophanyl-tRNA synthetase; InterPro IPR014729:IPR002306:IPR002305:IPR001412; KEGG: tfu:Tfu_2376 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; PRIAM: tryptophan--tRNA ligase; SPTR: C1YH30 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase
YP_003678333.1	COGs: COG1335 amidase related to nicotinamidase; InterPro IPR000868; KEGG: ami:Amir_1003 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: C1YH29 nicotinamidase-like amidase; PFAM: isochorismatase family
YP_003678334.1	COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR006405:IPR007229:IPR015977; KEGG: tfu:Tfu_2373 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; PRIAM: Nicotinate phosphoribosyltransferase; SPTR: C1YH28 Nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM:  nicotinate phosphoribosyltransferase
YP_003678335.1	COGs: COG1310 metal-dependent protease of the PAD1/JAB1 superfamily; InterPro IPR000555; KEGG: tfu:Tfu_2370 Mov34/MPN/PAD-1; PFAM: Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1 family protein; SPTR: C1YH27 Predicted metal-dependent protease of the PAD1/JAB1 superfamily; PFAM: Mov34/MPN/PAD-1 family
YP_003678336.1	InterPro IPR012675:IPR003749:IPR016155; KEGG: tcu:Tcur_3872 thiamineS protein; PFAM: thiamineS protein; SPTR: C1YH26 Molybdopterin synthase subunit MoaD; PFAM: ThiS family
YP_003678337.1	COGs: COG0031 Cysteine synthase; InterPro IPR005856:IPR000634:IPR001926:IPR001216; KEGG: tfu:Tfu_2368 cysteine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; SPTR: C1YH25 Cysteine synthase; TIGRFAM: cysteine synthase; PFAM: pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases
YP_003678338.1	COGs: COG1234 metal-dependent hydrolase of the beta-lactamase superfamily III; KEGG: tfu:Tfu_2366 hypothetical protein; SPTR: C1YH24 metal-dependent hydrolase, beta-lactamase superfamily III; PFAM: metallo-beta-lactamase superfamily
YP_003678339.1	COGs: COG0689 RNase PH; InterProIPR018336:IPR020568:IPR015847:IPR002381:IPR 001247; KEGG: tfu:Tfu_2365 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: C1YH23 RNAse PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
YP_003678340.1	COGs: COG0127 Xanthosine triphosphate pyrophosphatase; InterPro IPR002637; KEGG: tfu:Tfu_2364 Ham1-like protein; PFAM: Ham1 family protein; SPTR: C1YH22 nucleoside-triphosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
YP_003678341.1	KEGG: tfu:Tfu_0569 hypothetical protein; SPTR: C1YWJ1 Predicted O-methyltransferase, COG4122
YP_003678342.1	COGs: COG0744 membrane carboxypeptidase (penicillin-binding protein); InterPro IPR012338:IPR001264:IPR001460; KEGG: tfu:Tfu_0570 membrane carboxypeptidase (penicillin-binding protein); PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; SPTR: C1YWJ0 membrane carboxypeptidase (Penicillin-binding protein); PFAM: Penicillin binding protein transpeptidase domain; transglycosylase
YP_003678343.1	InterPro IPR008928; KEGG: tfu:Tfu_0571 hypothetical protein; SPTR: C1YWI9  uncharacterized protein
YP_003678344.1	COGs: COG2226 methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: tfu:Tfu_0572 hypothetical protein; PFAM: methyltransferase type 11; SPTR: C1YWI8 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain
YP_003678345.1	COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: tfu:Tfu_0573  glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: C1YWI7 glycosyltransferase; PFAM: glycosyl transferases group 1
YP_003678346.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sro:Sros_8200  TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YWI6 transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003678347.1	InterPro IPR014284; KEGG: tfu:Tfu_0574 DNA-directed RNA polymerase specialized sigma subunit sigma24 -like protein; SPTR: C1YWI5 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003678348.1	COGs: COG0379 Quinolinate synthase; InterPro IPR003473; KEGG: tfu:Tfu_0575 quinolinate synthetase; PFAM: Quinolinate synthetase A; SPTR: C1YWI4 Quinolinate synthetase A; TIGRFAM: quinolinate synthetase complex, subunit alpha; PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, subunit alpha
YP_003678349.1	COGs: COG4111 conserved hypothetical protein; InterPro IPR000086:IPR015797; KEGG: tfu:Tfu_0576 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: C1YWI3 NUDIX family protein; PFAM: NUDIX domain
YP_003678350.1	COGs: COG0546 phosphatase; InterPro IPR005833:IPR005834; KEGG: tfu:Tfu_0577 HAD family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: C1YM05 Predicted phosphatase; PFAM: haloacid dehalogenase-like hydrolase
YP_003678351.1	COGs: COG1125 ABC-type proline/glycine betaine transport systems ATPase components; InterPro IPR017871:IPR003593:IPR005892:IPR003439; KEGG: cai:Caci_3087 glycine betaine/L-proline ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YM04 glycine betaine/L-proline transport ATP binding subunit; TIGRFAM: glycine betaine/L-proline ABC transporter ATPase; PFAM: ABC transporter; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit
YP_003678352.1	COGs: COG1174 ABC-type proline/glycine betaine transport systems permease; InterPro IPR000515; KEGG: tcu:Tcur_3635 binding-protein-dependent transporters inner membrane component; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YM03 ABC-type proline/glycine betaine transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678353.1	COGs: COG1174 ABC-type proline/glycine betaine transport systems permease; InterPro IPR000515; KEGG: tcu:Tcur_3634 binding-protein-dependent transporters inner membrane component; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YM02 ABC-type proline/glycine betaine transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678354.1	COGs: COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transporter (osmoprotectant binding protein); InterPro IPR007210; KEGG: tcu:Tcur_3633 substrate-binding region of ABC-type glycine betaine transporter; PFAM: substrate-binding region of ABC-type glycine betaine transporter; SPTR: C1YM01 Periplasmic glycine betaine/choline-binding (Lipo)protein of an ABC-type transporter (Osmoprotectant binding protein); PFAM: substrate binding domain of ABC-type glycine betaine transporter
YP_003678355.1	COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR012349:IPR009002:IPR002563; KEGG: tfu:Tfu_0578  reductase; PFAM: flavin reductase domain protein FMN-binding; SPTR: C1YM00 Conserved protein of DIM6/NTAB family, COG1853; PFAM: Flavin reductase like domain
YP_003678356.1	COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR002142:IPR004635:IPR004634; KEGG: tfu:Tfu_0579 signal peptide peptidase A; PFAM: peptidase S49; SPTR: C1YLZ9 Signal peptide peptidase SppA, 36K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 67K type
YP_003678357.1	KEGG: tfu:Tfu_0581 hypothetical protein; SPTR: C1YLZ8  uncharacterized protein
YP_003678358.1	COGs: COG0612 Zn-dependent peptidase; InterPro IPR011237:IPR011249:IPR011765:IPR007863; KEGG: tfu:Tfu_2363  zinc proteinase; PFAM: peptidase M16 domain protein; SPTR: C1YLZ7 Predicted Zn-dependent peptidase; PFAM: peptidase M16 inactive domain; Insulinase (peptidase family M16)
YP_003678359.1	COGs: COG0612 Zn-dependent peptidase; InterPro IPR011249:IPR011765:IPR007863:IPR011237; KEGG: tfu:Tfu_2362  proteinase; PFAM: peptidase M16 domain protein; SPTR: C1YLZ6 Predicted Zn-dependent peptidase; PFAM: peptidase M16 inactive domain; Insulinase (peptidase family M16)
YP_003678360.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR000719:IPR008271:IPR011009:IPR020635:IPR 002290:IPR017442; KEGG: tfu:Tfu_2361 tyrosine protein kinase:serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: C1YLZ5 serine/threonine protein kinase; PFAM: protein kinase domain
YP_003678361.1	COGs: COG1225 peroxiredoxin; InterPro IPR017936:IPR012335:IPR012336:IPR000866; KEGG: tfu:Tfu_2360 bacterioferritin comigratory protein; PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; SPTR: C1YLZ4 peroxiredoxin; PFAM: AhpC/TSA family
YP_003678362.1	COGs: COG0558 phosphatidylglycerophosphate synthase; InterPro IPR000462; KEGG: tfu:Tfu_2359 hypothetical protein; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: C1YLZ3 phosphatidylglycerophosphate synthase; PFAM: CDP-alcohol phosphatidyltransferase
YP_003678363.1	KEGG: tfu:Tfu_2358 hypothetical protein; SPTR: C1YLZ2  uncharacterized protein; PFAM: protein of unknown function (DUF3618)
YP_003678364.1	COGs: COG3616 amino acid aldolase or racemase; InterPro IPR001608; KEGG: tfu:Tfu_2357 hypothetical protein; PFAM: alanine racemase; SPTR: C1YLZ1 Predicted amino acid aldolase or racemase; PFAM: alanine racemase, N-terminal domain
YP_003678365.1	COGs: COG0788 Formyltetrahydrofolate hydrolase; InterPro IPR002376:IPR004810:IPR002912; KEGG: tfu:Tfu_2356 formyltetrahydrofolate deformylase; PFAM: formyl transferase; amino acid-binding ACT domain protein; SPTR: C1YLZ0 Formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase
YP_003678366.1	COGs: COG1302 conserved hypothetical protein; InterPro IPR005531; KEGG: sro:Sros_8027 hypothetical protein; PFAM: protein of unknown function DUF322; SPTR: C1YLY9 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF322)
YP_003678367.1	KEGG: sro:Sros_8028 hypothetical protein; SPTR: C1YLY8  uncharacterized protein
YP_003678368.1	KEGG: sro:Sros_8029 hypothetical protein; SPTR: C1YLY7  uncharacterized protein
YP_003678369.1	KEGG: sro:Sros_8030 hypothetical protein; SPTR: C1YLY6  uncharacterized protein; PFAM: protein of unknown function (DUF322)
YP_003678370.1	KEGG: tfu:Tfu_2355 hypothetical protein; SPTR: C1YLY5  uncharacterized protein
YP_003678371.1	InterPro IPR002345; KEGG: nml:Namu_4999 hypothetical protein; SPTR: C1YLY4  uncharacterized protein
YP_003678372.1	COGs: COG3607 lactoylglutathione lyase; InterPro IPR004360; KEGG: rer:RER_40730 hypothetical protein; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YLY3 Predicted lactoylglutathione lyase
YP_003678373.1	COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR011059:IPR006680; KEGG: ami:Amir_2756 amidohydrolase; PFAM: amidohydrolase; SPTR: C1YLY1 Amidohydrolase, imidazolonepropionase; PFAM: Amidohydrolase family
YP_003678374.1	COGs: COG1737 transcriptional regulators; InterPro IPR001347:IPR000281; KEGG: ami:Amir_2753 transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); SPTR: C1YLY0 transcriptional regulator; PFAM: SIS domain; Helix-turn-helix domain, rpiR family
YP_003678375.1	COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: nth:Nther_2710 Na+/solute symporter; PFAM: Na+/solute symporter; SPTR: C1YLX9 Na+/proline symporter; PFAM: Sodium:solute symporter family; TIGRFAM: SSS sodium solute transporter superfamily
YP_003678376.1	COGs: COG1760 L-serine deaminase; InterPro IPR004644:IPR005130:IPR005131; KEGG: sro:Sros_1754 L-serine ammonia-lyase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; PRIAM: L-serine ammonia-lyase; SPTR: C1YLX8 L-serine ammonia-lyase; TIGRFAM: L-serine dehydratase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form
YP_003678377.1	COGs: COG0112 glycine/serine hydroxymethyltransferase; InterPro IPR015424:IPR001085:IPR019798:IPR015421; KEGG: tfu:Tfu_2353 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; PRIAM: glycine hydroxymethyltransferase; SPTR: C1YLX7 serine hydroxymethyltransferase; PFAM: serine hydroxymethyltransferase
YP_003678378.1	COGs: COG0509 glycine cleavage system protein H (lipoate-binding); InterPro IPR003016:IPR011053:IPR017453:IPR002930; KEGG: tfu:Tfu_2352 glycine cleavage system protein H; PFAM: glycine cleavage H-protein; SPTR: C1YLX6 glycine cleavage system protein H; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein
YP_003678379.1	COGs: COG0404 glycine cleavage system protein T (aminomethyltransferase); InterPro IPR006223:IPR006222:IPR013977; KEGG: tfu:Tfu_2351 glycine cleavage system aminomethyltransferase T; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel; SPTR: C1YLX5 aminomethyltransferase; TIGRFAM: glycine cleavage system T protein; PFAM: aminomethyltransferase folate-binding domain; glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein
YP_003678380.1	COGs: COG2602 beta-lactamase class D; InterPro IPR001460:IPR012338; KEGG: sro:Sros_8961 beta-lactamase; PFAM: penicillin-binding protein transpeptidase; PRIAM: beta-lactamase; SPTR: C1YLX4 beta-lactamase class D; PFAM: Penicillin binding protein transpeptidase domain
YP_003678381.1	COGs: COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218:IPR006219:IPR013785; KEGG: tfu:Tfu_2350 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: C1YLX3 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase
YP_003678382.1	COGs: COG0365 acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873; KEGG: ami:Amir_2275 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YLX2 acyl-CoA synthetase/AMP-acid ligase; PFAM: AMP-binding enzyme
YP_003678383.1	KEGG: svi:Svir_14400 hypothetical protein; SPTR: C1YLX1  uncharacterized protein
YP_003678384.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR005944:IPR002410:IPR000073; KEGG: tfu:Tfu_2349 prolyl aminopeptidase; PFAM: alpha/beta hydrolase fold; PRIAM: prolyl aminopeptidase; SPTR: C1YLX0 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily
YP_003678385.1	KEGG: sro:Sros_1550 signal transduction histidine kinase-like protein; SPTR: C1YLW9  uncharacterized protein
YP_003678386.1	InterPro IPR010693; KEGG: afo:Afer_0565 ferredoxin (3Fe-4S); PFAM: protein of unknown function DUF1271; SPTR: C1YLW8 Ferredoxin; PFAM: protein of unknown function (DUF1271)
YP_003678387.1	COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR004099:IPR016156:IPR013027; KEGG: tfu:Tfu_2348  ferredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: C1YLW7 NAD(P)H-nitrite reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003678388.1	COGs: COG4448 L-asparaginase II; InterPro IPR010349; KEGG: sro:Sros_6297 hypothetical protein; PFAM: L-asparaginase II; SPTR: C1YLW6 L-asparaginase II; PFAM: L-asparaginase II
YP_003678389.1	COGs: COG0847 DNA polymerase III subunit epsilon and related 3'-5' exonuclease; InterPro IPR012337:IPR006055:IPR013520; KEGG: tfu:Tfu_2347 exonuclease; PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; SPTR: C1YLW5 DNA polymerase III subunit epsilon-like 3'-5' exonuclease; PFAM: exonuclease
YP_003678390.1	KEGG: bpr:GBP346_A0535 hypothetical protein; SPTR: C1YLW4  uncharacterized protein
YP_003678391.1	COGs: COG1309 transcriptional regulator; InterPro IPR001647:IPR012287:IPR011075:IPR009057; KEGG: tfu:Tfu_2346 hypothetical protein; PFAM: regulatory protein TetR; SPTR: C1YLW3 transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003678392.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639:IPR000073; KEGG: mjl:Mjls_0879 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; SPTR: C1YLW2 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003678393.1	InterPro IPR010852; KEGG: sco:SCO0460 hypothetical protein; PFAM: protein of unknown function DUF1470; SPTR: C1YLW1 Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding; PFAM: CGNR zinc finger
YP_003678394.1	COGs: COG5398 Heme oxygenase; InterPro IPR016053:IPR002051:IPR016084; KEGG: tfu:Tfu_2345 heme oxygenase (decyclizing); PFAM: Haem oxygenase-like; PRIAM: Heme oxygenase; SPTR: C1YLW0 Heme oxygenase; PFAM: Heme oxygenase
YP_003678395.1	COGs: COG2208 serine phosphatase RsbU regulator of sigma subunit; InterPro IPR001789:IPR011006:IPR001932:IPR010822; KEGG: tfu:Tfu_2344 response regulator receiver:protein phosphatase 2C-like; PFAM: stage II sporulation E family protein; response regulator receiver; SMART: protein phosphatase 2C domain protein; response regulator receiver; SPTR: C1YLV9 serine phosphatase RsbU, regulator of sigma subunit; PFAM: Response regulator receiver domain; stage II sporulation protein E (SpoIIE)
YP_003678396.1	COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR009082:IPR003660:IPR003594:IPR003661:IPR 005467:IPR007891:IPR004358; KEGG: tfu:Tfu_2343 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; CHASE3 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: C1YLV8 Sensor protein; PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; CHASE3 domain
YP_003678397.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: tfu:Tfu_2342 response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: C1YLV7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain
YP_003678398.1	COGs: COG0394 protein-tyrosine-phosphatase; InterPro IPR017867:IPR000106; KEGG: tfu:Tfu_2341 protein-tyrosine-phosphatase; PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight; SPTR: C1YLV6 protein-tyrosine-phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_003678399.1	COGs: COG3001 conserved hypothetical protein; InterPro IPR011009:IPR016477; KEGG: tfu:Tfu_2340 hypothetical protein; PFAM: fructosamine/ketosamine-3-kinase; SPTR: C1YLV5 fructosamine-3-kinase; PFAM: fructosamine kinase
YP_003678400.1	COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005833:IPR006328:IPR006388:IPR005834; KEGG: sma:SAV_737 2-haloalkanoic acid dehalogenase; PFAM: haloacid dehalogenase; SPTR: C1YLV4 2-haloalkanoic acid dehalogenase, type II; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); TIGRFAM: Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase; 2-haloalkanoic acid dehalogenase, type II
YP_003678401.1	InterPro IPR004360; KEGG: rop:ROP_63350 hypothetical protein; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YLV3  uncharacterized protein
YP_003678402.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013149:IPR016040:IPR011032:IPR013154; KEGG: sro:Sros_7645 oxidoreductase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; SPTR: C1YLV2 Zn-dependent oxidoreductase, NADPH:quinone reductase; PFAM: Zinc-binding dehydrogenase
YP_003678403.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: ami:Amir_3846 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YLV1 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003678404.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683:IPR004104; KEGG: nfa:nfa23680  oxidoreductase; PFAM: oxidoreductase domain protein; oxidoreductase domain; SPTR: C1YLV0 Predicted dehydrogenase; PFAM: oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase family, C-terminal alpha/beta domain
YP_003678405.1	COGs: COG3395 conserved hypothetical protein; InterPro IPR010737; KEGG: tfu:Tfu_2336 hypothetical protein; PFAM: type III effector Hrp-dependent outers; SPTR: C1YLU9 Uncharacterized conserved protein; PFAM: protein of unknown function, DUF1537
YP_003678406.1	InterPro IPR011059; KEGG: ami:Amir_4817 hypothetical protein; SPTR: C1YLU8  uncharacterized protein; PFAM: Agrobacterium tumefaciens protein Atu4866
YP_003678407.1	COGs: COG1680 beta-lactamase class C and other penicillin binding protein; InterPro IPR001466:IPR012338; KEGG: pjd:Pjdr2_1656 beta-lactamase; PFAM: beta-lactamase; SPTR: C1YLU7 Penicillin-binding protein, beta-lactamase class C; PFAM: beta-lactamase
YP_003678408.1	KEGG: sro:Sros_5014 hypothetical protein; SPTR: C1YLU6  uncharacterized protein
YP_003678409.1	InterPro IPR000835:IPR011991:IPR009057; KEGG: sma:SAV_697 hypothetical protein; PFAM: regulatory protein MarR; SPTR: C1YLU5 transposase, IS30 family; PFAM: MarR family
YP_003678410.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: tfu:Tfu_1699  hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YLU4 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003678411.1	KEGG: tfu:Tfu_2335 monooxygenase; SPTR: C1YLU3  uncharacterized protein
YP_003678412.1	COGs: COG2072 flavoprotein involved in K+ transport; InterPro IPR013027:IPR006076; KEGG: tfu:Tfu_1698  monooxygenase; PFAM: FAD dependent oxidoreductase; SPTR: C1YLU2 Predicted flavoprotein involved in K+ transport; PFAM: Flavin-binding monooxygenase-like
YP_003678413.1	KEGG: tfu:Tfu_2334 hypothetical protein; SPTR: C1YLU1  uncharacterized protein; PFAM: P-aminobenzoate N-oxygenase AurF
YP_003678414.1	COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR016040:IPR013149:IPR002198:IPR002347; KEGG: sco:SCO0356 oxidoreductase; PFAM: alcohol dehydrogenase zinc-binding domain protein; short-chain dehydrogenase/reductase SDR; SPTR: C1YLU0 Short-chain alcohol dehydrogenase; PFAM: short chain dehydrogenase
YP_003678415.1	InterPro IPR000551:IPR009061; KEGG: tfu:Tfu_2333 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YLT9 Predicted transcriptional regulator
YP_003678416.1	KEGG: mea:Mex_1p0657 hypothetical protein; SPTR: C1YLT8  uncharacterized protein
YP_003678417.1	COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR017896:IPR006076; KEGG: tfu:Tfu_2332  cholesterol oxidase; PFAM: FAD dependent oxidoreductase; SPTR: C1YLT7 Choline dehydrogenase-like flavoprotein; PFAM: FAD binding domain; GMC oxidoreductase
YP_003678418.1	KEGG: tfu:Tfu_2331  cholesterol esterase; SPTR: C1YLT6  uncharacterized protein
YP_003678419.1	KEGG: tfu:Tfu_2330 hypothetical protein; SPTR: C1YLT5  uncharacterized protein
YP_003678420.1	COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016:IPR000212; KEGG: tfu:Tfu_2329 superfamily protein I DNA/RNA helicase; PFAM: UvrD/REP helicase; SPTR: C1YLT4 DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase
YP_003678421.1	InterPro IPR012551; KEGG: svi:Svir_39520 protein of unknown function (DUF1707); PFAM: protein of unknown function DUF1707; SPTR: C1YLT3  uncharacterized protein; PFAM: Domain of unknown function (DUF1707)
YP_003678422.1	COGs: COG2949 Uncharacterized membrane protein; InterPro IPR003848; KEGG: tfu:Tfu_2325 hypothetical protein; PFAM: protein of unknown function DUF218; SPTR: C1YLT2 Uncharacterized membrane protein; PFAM: DUF218 domain
YP_003678423.1	KEGG: tcu:Tcur_1429 PBS lyase heat domain protein repeat-containing protein; SPTR: C1YLT1  uncharacterized protein
YP_003678424.1	COGs: COG2949 Uncharacterized membrane protein; InterPro IPR000209:IPR003848; KEGG: tfu:Tfu_2325 hypothetical protein; PFAM: protein of unknown function DUF218; SPTR: C1YLT0 Uncharacterized membrane protein; PFAM: DUF218 domain
YP_003678425.1	KEGG: similar to NUP153 protein; SPTR: C1YLS9  uncharacterized protein
YP_003678426.1	COGs: COG4805 conserved hypothetical protein; InterPro IPR010281; KEGG: sro:Sros_1181  secreted protein; PFAM: protein of unknown function DUF885; SPTR: C1YLS8 Uncharacterized conserved protein; PFAM: Bacterial protein of unknown function (DUF885)
YP_003678427.1	COGs: COG2103 sugar phosphate isomerase; InterPro IPR005486:IPR001347; KEGG: tfu:Tfu_2324 N-acetylmuramic acid-6-phosphate etherase; PFAM: sugar isomerase (SIS); SPTR: C1YLS7 Predicted sugar phosphate isomerase, COG2103; PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase
YP_003678428.1	COGs: COG1737 transcriptional regulators; InterPro IPR001347:IPR000281; KEGG: tfu:Tfu_2323  transcriptional regulator; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); SPTR: C1YLS6 RpiR family transcriptional regulator; PFAM: SIS domain; Helix-turn-helix domain, rpiR family
YP_003678429.1	COGs: COG3629 DNA-binding transcriptional activator of the SARP family; InterPro IPR016032:IPR001867:IPR005158; KEGG: svi:Svir_00460 DNA-binding transcriptional activator of the SARP family; PFAM: transcriptional activator domain; transcriptional regulator domain protein; SPTR: C1YLS5 DNA-binding transcriptional activator of the SARP family; PFAM: Bacterial transcriptional activator domain; transcriptional regulatory protein, C terminal
YP_003678430.1	KEGG: tfu:Tfu_2321 hypothetical protein; SPTR: C1YLS4  uncharacterized protein
YP_003678431.1	KEGG: bcv:Bcav_3422 hypothetical protein; SPTR: C1YLS3  uncharacterized protein
YP_003678432.1	KEGG: bcv:Bcav_3422 hypothetical protein; SPTR: C1YLS2  uncharacterized protein
YP_003678433.1	KEGG: bcv:Bcav_3422 hypothetical protein; SPTR: C1YLS1  uncharacterized protein
YP_003678434.1	InterPro IPR000073:IPR013595; KEGG: tcu:Tcur_2785 TAP domain protein; PFAM: TAP domain protein; alpha/beta hydrolase fold; SPTR: C1YLS0 alpha/beta hydrolase family protein; PFAM: TAP-like protein; alpha/beta hydrolase fold
YP_003678435.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: ttr:Tter_0896 binding-protein-dependent transporters inner membrane component; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YLR9 ABC-type dipeptide/oligopeptide/nickel transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678436.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: ttr:Tter_0897 binding-protein-dependent transporters inner membrane component; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YLR8 ABC-type dipeptide/oligopeptide/nickel transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678437.1	COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transporter ATPase component; InterPro IPR003593:IPR010066:IPR003439:IPR013563; KEGG: ttr:Tter_0898 oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter related; oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: C1YLR7 oligopeptide/dipeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter ATP-binding protein, C-terminal domain
YP_003678438.1	COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transporter ATPase component; InterProIPR003439:IPR017871:IPR003593:IPR010066:IPR 013563; KEGG: ttr:Tter_0899 oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; SPTR: C1YLR6 ABC-type dipeptide/oligopeptide/nickel transporter ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region
YP_003678439.1	KEGG: ttr:Tter_0900 hypothetical protein; SPTR: C1YLR5  uncharacterized protein
YP_003678440.1	COGs: COG0747 ABC-type dipeptide transporter periplasmic component; InterProIPR017909:IPR013838:IPR002173:IPR006311:IPR 000914; KEGG: ttr:Tter_0901 extracellular solute-binding protein family 5; PFAM: extracellular solute-binding protein family 5; SPTR: C1YLR4 extracellular solute-binding protein, family 5; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_003678441.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterProIPR016040:IPR013149:IPR011032:IPR013154:IPR 010085:IPR002364; KEGG: sma:SAV_414 dehydrogenase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; SPTR: C1YLR3 Crotonyl-CoA reductase; TIGRFAM: crotonyl-CoA reductase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: crotonyl-CoA reductase
YP_003678442.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR005467:IPR003594; KEGG: fal:FRAAL1814  sensor-like histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YLR2 Signal transduction histidine kinase, COG0642; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003678443.1	COGs: COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid; InterPro IPR004942; KEGG: ami:Amir_5417 roadblock/LC7 family protein; PFAM: Roadblock/LC7 family protein; SPTR: C1YLR1 Uncharacterized conserved protein; PFAM: Roadblock/LC7 domain
YP_003678444.1	InterPro IPR007995; KEGG: fal:FRAAL1812 hypothetical protein; PFAM: protein of unknown function DUF742; SPTR: C1YLR0  uncharacterized protein; PFAM: protein of unknown function (DUF742)
YP_003678445.1	COGs: COG2229 GTPase; InterPro IPR004130; KEGG: sma:SAV_2697 ATP/GTP-binding protein; PFAM: protein of unknown function ATP binding; SPTR: C1YLQ9 Predicted GTPase, COG2229; PFAM: Conserved hypothetical ATP binding protein
YP_003678446.1	KEGG: fre:Franean1_5474  oxygenase subunit protein; SPTR: C1YLQ8 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase
YP_003678447.1	COGs: COG3321 polyketide synthase modules and related protein; InterProIPR009081:IPR006162:IPR018201:IPR018294:IPR 016038:IPR001227:IPR016040:IPR016039:IPR016035:IPR011032:I PR016036:IPR014030:IPR014031:IPR014043:IPR006163:IPR013154 :IPR013149:IPR002198; KEGG: sgr:SGR_6179  type-I PKS; PFAM: acyl transferase; beta-ketoacyl synthase ; phosphopantetheine-binding; alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; short-chain dehydrogenase/reductase SDR; SPTR: C1YLQ6 Short chain dehydrogenase/beta-ketoacyl synthase/zinc-binding dehydrogenase; PFAM: acyl transferase domain; phosphopantetheine attachment site; KR domain; beta-ketoacyl synthase, N-terminal domain; Zinc-binding dehydrogenase; beta-ketoacyl synthase, C-terminal domain
YP_003678448.1	COGs: COG3321 polyketide synthase modules and related protein; InterProIPR009081:IPR018201:IPR014030:IPR006162:IPR 016036:IPR001227:IPR016035:IPR006163:IPR020841:IPR014031:I PR016039:IPR016038:IPR014043; KEGG: mpa:MAP1371 Pks8; PFAM: beta-ketoacyl synthase ; phosphopantetheine-binding; acyl transferase; PRIAM: 6-deoxyerythronolide-B synthase; SMART: polyketide synthase, beta-ketoacyl synthase region; SPTR: C1YLQ5 polyketide synthase family protein; PFAM: acyl transferase domain; phosphopantetheine attachment site; beta-ketoacyl synthase, N-terminal domain; beta-ketoacyl synthase, C-terminal domain
YP_003678449.1	COGs: COG3321 polyketide synthase modules and related protein; InterProIPR009081:IPR006162:IPR018201:IPR000408:IPR 016038:IPR001227:IPR016040:IPR016039:IPR016035:IPR016036:I PR014030:IPR014031:IPR014043:IPR002198:IPR006163:IPR001031 ; KEGG: sgr:SGR_6183  type-I PKS; PFAM: acyl transferase; beta-ketoacyl synthase ; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; thioesterase; SPTR: C1YLQ3 Short chain dehydrogenase/acyltransferase/thioesterase; PFAM: thioesterase domain; phosphopantetheine attachment site; acyl transferase domain; KR domain; beta-ketoacyl synthase, N-terminal domain; beta-ketoacyl synthase, C-terminal domain
YP_003678450.1	COGs: COG1643 HrpA-like helicase; InterProIPR001650:IPR007502:IPR014021:IPR010222:IPR 011709:IPR003593:IPR014001; KEGG: tfu:Tfu_2317 ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; helicase; protein of unknown function DUF1605; SMART: helicase-associated domain protein; DEAD-like helicase ; helicase; ATPase AAA; SPTR: C1YLQ2 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Domain of unknown function (DUF3418); Domain of unknown function (DUF1605); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpA
YP_003678451.1	InterPro IPR000182:IPR016181; KEGG: bpa:BPP0380 acetyltransferase (GNAT) family protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YLQ1 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003678452.1	InterPro IPR014795; KEGG: syn:sll7031 hypothetical protein; PFAM: protein of unknown function DUF1778; SPTR: C1YLQ0 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF1778)
YP_003678453.1	KEGG: dvm:DvMF_1433 iron-containing alcohol dehydrogenase
YP_003678454.1	COGs: COG2706 3-carboxymuconate cyclase; InterPro IPR019758:IPR015943:IPR019405; KEGG: tfu:Tfu_2315  secreted protein; PFAM: Domain of unknown function DUF2394; SPTR: C1YLP9 3-carboxymuconate cyclase; PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme
YP_003678455.1	KEGG: sco:SCO7669 oxidoreductase; SPTR: C1YLP8  uncharacterized protein
YP_003678456.1	KEGG: saq:Sare_4993 hypothetical protein; SPTR: C1YLP7  uncharacterized protein
YP_003678457.1	COGs: COG1268 conserved hypothetical protein; InterPro IPR003784; KEGG: tfu:Tfu_2314 hypothetical protein; PFAM: BioY protein; SPTR: C1YLP6 Uncharacterized conserved protein; PFAM: BioY family
YP_003678458.1	COGs: COG1122 ABC-type cobalt transporter ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: tfu:Tfu_2313 ABC-type cobalt transporter ATPase component; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YLP5 ABC-type cobalt transporter ATPase component; PFAM: ABC transporter
YP_003678459.1	COGs: COG0619 ABC-type cobalt transporter permease component CbiQ and related transporter; InterPro IPR003339; KEGG: tfu:Tfu_2312  cobalt transporter permease; PFAM: cobalt transport protein; SPTR: C1YLP4 ABC-type cobalt transporter permease CbiQ; PFAM: Cobalt transporter
YP_003678460.1	InterPro IPR012338; KEGG: tfu:Tfu_2311  secreted protein; SPTR: C1YLP3  uncharacterized protein
YP_003678461.1	COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109; KEGG: sma:SAV_5555 integrase/recombinase; PFAM: Resolvase domain; Recombinase; SPTR: C1YLP2 Site-specific recombinase, DNA invertase Pin; PFAM: Recombinase; Resolvase, N terminal domain
YP_003678462.1	SPTR: C1YLP1  uncharacterized protein
YP_003678463.1	SPTR: C1YLP0  uncharacterized protein
YP_003678464.1	KEGG: kra:Krad_1719 hypothetical protein; SPTR: C1YLN9  uncharacterized protein; PFAM: P22 coat protein - gene protein 5
YP_003678465.1	InterPro IPR001387:IPR010982; KEGG: sma:SAV_5551 hypothetical protein; SMART: helix-turn-helix domain protein; SPTR: C1YLN8  uncharacterized protein
YP_003678466.1	KEGG: amt:Amet_2095 hypothetical protein; SPTR: C1YLN7  uncharacterized protein
YP_003678467.1	KEGG: hypothetical protein; SPTR: C5PGP0 RNA recognition motif containing protein
YP_003678468.1	KEGG: tfu:Tfu_0481 hypothetical protein; SPTR: C1YLN6  uncharacterized protein
YP_003678469.1	COGs: COG2188 transcriptional regulators; InterPro IPR000524:IPR011991; KEGG: tfu:Tfu_0482 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C9Z968  GntR-family regulator; PFAM: Bacterial regulatory proteins, gntR family
YP_003678470.1	KEGG: tfu:Tfu_0481 hypothetical protein; SPTR: C1YLN5  uncharacterized protein
YP_003678471.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: tfu:Tfu_2308  3-oxoacyl-ACP reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YLN3  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003678472.1	InterPro IPR003594; KEGG: tfu:Tfu_2307  regulator; PFAM: ATP-binding region ATPase domain protein; SPTR: C1YLN2 histidine kinase; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003678473.1	InterPro IPR001387:IPR010982; KEGG: tfu:Tfu_2306 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YLN1  uncharacterized protein; PFAM: Helix-turn-helix
YP_003678474.1	InterPro IPR007278; KEGG: tfu:Tfu_2305  regulator; PFAM: protein of unknown function DUF397; SPTR: C1YLN0  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003678475.1	COGs: COG0803 ABC-type metal ion transporter periplasmic component/surface adhesin; InterPro IPR006127; KEGG: tfu:Tfu_2304  ABC-transporter metal-binding lipoprotein; PFAM: periplasmic solute binding protein; SPTR: C1YLM9 ABC-type metal ion transporter periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family
YP_003678476.1	COGs: COG0569 K+ transporters NAD-binding component; InterPro IPR003148:IPR006037:IPR000408:IPR016040; KEGG: tfu:Tfu_2303  cation transporter; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: C1YLM8 K+ transporter NAD-binding component; PFAM: TrkA-N domain; TrkA-C domain
YP_003678477.1	COGs: COG0168 Trk-type K+ transporters membrane components; InterPro IPR003445; KEGG: tfu:Tfu_2302  cation transporter; PFAM: cation transporter; PRIAM: H(+)-transporting two-sector ATPase; SPTR: C1YLM7 Trk-type K+ transporter membrane component; PFAM: Cation transporter
YP_003678478.1	COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: tfu:Tfu_2300 cation efflux protein; PFAM: cation efflux protein; SPTR: C1YLM6 Cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_003678479.1	InterPro IPR001845:IPR011991; KEGG: tfu:Tfu_2299 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: C1YLM5 transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family
YP_003678480.1	COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: tfu:Tfu_2296  integral membrane efflux protein; PFAM: acriflavin resistance protein; SPTR: C1YLM4 Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family
YP_003678481.1	COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterProIPR011991:IPR013325:IPR013324:IPR000943:IPR 014322:IPR014284:IPR007627:IPR007624:IPR007630; KEGG: tfu:Tfu_1334 RNA polymerase sigma factor; PFAM: sigma-70 region 4 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; SPTR: C1YLM3 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily
YP_003678482.1	InterPro IPR004155:IPR016024:IPR011989; KEGG: rrs:RoseRS_3392 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SPTR: C1YLM2 PBS lyase HEAT-like repeat protein; PFAM: PBS lyase HEAT-like repeat
YP_003678483.1	KEGG: similar to Collagen alpha 1(III) chain precursor; SPTR: C1YLM1  uncharacterized protein
YP_003678484.1	InterPro IPR003594; KEGG: tfu:Tfu_2295 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; SPTR: C1YLM0 anti-sigma regulatory factor (Ser/Thr protein kinase); PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003678485.1	InterPro IPR001173; KEGG: nfa:nfa22310  glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: C1YLL9 glycosyl transferase; PFAM: glycosyl transferase family 2
YP_003678486.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: sro:Sros_7099 binding-protein-dependent transporters inner membrane component; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YLL8 ABC-type dipeptide/oligopeptide/nickel transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678487.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: sma:SAV_3046 peptide ABC transporter permease; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YLL7 ABC-type dipeptide/oligopeptide/nickel transporter permease; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678488.1	COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transporter ATPase component; InterProIPR010066:IPR003439:IPR017871:IPR003593:IPR 013563; KEGG: sro:Sros_7097 glutathione import ATP-binding protein GsiA; PFAM: ABC transporter related; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; SPTR: C1YLL6 oligopeptide/dipeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK; oligopeptide/dipeptide ABC transporter ATP-binding protein, C-terminal domain
YP_003678489.1	COGs: COG0747 ABC-type dipeptide transporter periplasmic component; InterPro IPR000914; KEGG: tfu:Tfu_0818 peptide/nickel transporter substrate-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: C1YLL5 ABC-type dipeptide transporter periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_003678490.1	COGs: COG3866 pectate lyase; InterPro IPR012334:IPR011050:IPR002022; KEGG: sro:Sros_6915 pectate lyase-like protein; PFAM: pectate lyase/Amb allergen; SMART: pectate lyase/Amb allergen; SPTR: C1YLL4 pectate lyase; PFAM: pectate lyase
YP_003678491.1	KEGG: similar to hCG1980490; SPTR: C1YLL3  uncharacterized protein
YP_003678492.1	KEGG: tcu:Tcur_3899 hypothetical protein; SPTR: C1YLL2  uncharacterized protein
YP_003678493.1	KEGG: tfu:Tfu_2280 hypothetical protein; SPTR: C1YLL1  uncharacterized protein
YP_003678494.1	KEGG: sen:SACE_6654 hypothetical protein; SPTR: C1YLL0  uncharacterized protein
YP_003678495.1	COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: sco:SCO6024 transferase; PFAM: glycosyl transferase group 1; SPTR: C1YLK9 glycosyltransferase; PFAM: glycosyl transferases group 1
YP_003678496.1	InterPro IPR003961:IPR008957; KEGG: tcu:Tcur_1396 fibronectin type III domain protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; SPTR: C1YLK8 Fibronectin type III domain-containing protein
YP_003678497.1	COGs: COG1835 acyltransferase; InterPro IPR002656; KEGG: tfu:Tfu_1701 hypothetical protein; PFAM: acyltransferase; SPTR: C1YLK7 Predicted acyltransferase; PFAM: acyltransferase family
YP_003678498.1	KEGG: svi:Svir_26910 hypothetical protein; SPTR: C1YLK6  uncharacterized protein
YP_003678499.1	InterPro IPR019931; KEGG: saq:Sare_4993 hypothetical protein; SPTR: C1YLK5  uncharacterized protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; TIGRFAM: LPXTG-motif cell wall anchor domain
YP_003678500.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: ami:Amir_3140 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YLK4 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003678501.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: ami:Amir_3139 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YLK3  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003678502.1	KEGG: cmi:CMM_0556 hypothetical protein; SPTR: C1YLK2  uncharacterized protein
YP_003678503.1	KEGG: sen:SACE_7270 hypothetical protein; SPTR: C1YLK1  uncharacterized protein
YP_003678504.1	KEGG: sen:SACE_7271 hypothetical protein; SPTR: C1YLK0  uncharacterized protein
YP_003678505.1	COGs: COG0111 phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR016040:IPR006140:IPR006139; KEGG: kra:Krad_2139 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: C1YLJ9 phosphoglycerate dehydrogenase-like oxidoreductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
YP_003678506.1	COGs: COG2186 transcriptional regulators; InterPro IPR011711:IPR000524:IPR011991; KEGG: sth:STH97 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator; SPTR: C1YLJ8 transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003678507.1	COGs: COG3622 hydroxypyruvate isomerase; InterPro IPR013022:IPR012307; KEGG: bfa:Bfae_08170 hydroxypyruvate isomerase; PFAM: xylose isomerase; SPTR: C1YLJ7 hydroxypyruvate isomerase; PFAM: Xylose isomerase-like TIM barrel
YP_003678508.1	COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterProIPR002204:IPR016040:IPR013328:IPR008927:IPR 006183:IPR006398:IPR006115; KEGG: sen:SACE_1936 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; SPTR: C1YLJ6 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase
YP_003678509.1	InterPro IPR003790; KEGG: kra:Krad_2141 hypothetical protein; PFAM: protein of unknown function DUF187; SPTR: C1YLJ5 Uncharacterized conserved protein; PFAM: beta-galactosidase trimerisation domain; Uncharacterised BCR, COG1649
YP_003678510.1	InterPro IPR017853; KEGG: kra:Krad_2147 hypothetical protein; SPTR: C1YLJ4  uncharacterized protein; PFAM: beta-galactosidase trimerisation domain
YP_003678511.1	COGs: COG1653 ABC-type sugar transporter periplasmic component; InterPro IPR006059; KEGG: kra:Krad_2144 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: C1YLJ3 carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein
YP_003678512.1	COGs: COG1175 ABC-type sugar transporters permease components; InterPro IPR000515; KEGG: kra:Krad_2143 binding-protein-dependent transporters inner membrane component; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YLJ2 carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678513.1	COGs: COG0395 ABC-type sugar transporter permease component; InterPro IPR000515; KEGG: kra:Krad_2142 binding-protein-dependent transporters inner membrane component; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YLJ1 carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678514.1	COGs: COG1802 transcriptional regulators; InterPro IPR000524:IPR011991:IPR011711; KEGG: kra:Krad_2145 transcriptional regulator, GntR family; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C1YLJ0 transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003678515.1	KEGG: sro:Sros_7437 hypothetical protein; SPTR: C1YLI9  uncharacterized protein
YP_003678516.1	InterPro IPR016024; KEGG: sco:SCP1.254c hypothetical protein; SPTR: C1YLI8  uncharacterized protein; PFAM: HEAT repeat
YP_003678517.1	COGs: COG1949 oligoribonuclease (3'->5' exoribonuclease); InterPro IPR012337:IPR006055:IPR013520; KEGG: tfu:Tfu_2269 oligoribonuclease; PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; SPTR: C1YLI7 oligoribonuclease (3'->5' exoribonuclease); PFAM: exonuclease
YP_003678518.1	InterPro IPR018929; KEGG: tfu:Tfu_2268 hypothetical protein; PFAM: protein of unknown function DUF2510; SPTR: C1YLI6  uncharacterized protein; PFAM: protein of unknown function (DUF2510)
YP_003678519.1	KEGG: tfu:Tfu_2267 hypothetical protein; SPTR: C1YLI5  uncharacterized protein
YP_003678520.1	InterPro IPR002035; KEGG: tfu:Tfu_2266 von Willebrand factor, type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: C1YLI4 von Willebrand factor type A-like protein; PFAM: von Willebrand factor type A domain
YP_003678521.1	InterPro IPR002035:IPR018247; KEGG: sro:Sros_1377 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: C1YLI3 von Willebrand factor type A-like protein
YP_003678522.1	InterPro IPR000691; KEGG: tfu:Tfu_2265  secreted protein; SPTR: C1YLI2  uncharacterized protein
YP_003678523.1	COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: tfu:Tfu_2264  rRNA methylase; PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: C1YLI1 rRNA methylase; PFAM: SpoU rRNA methylase family
YP_003678524.1	COGs: COG0111 phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR016040:IPR006140:IPR006139; KEGG: tfu:Tfu_2263  dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: C1YLI0 phosphoglycerate dehydrogenase-like oxidoreductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
YP_003678525.1	COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR001098:IPR002298; KEGG: sro:Sros_6678 DNA polymerase I - 3'-5' exonuclease and polymerase domains-like protein; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: C1YLH9 DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains; PFAM: DNA polymerase family A
YP_003678526.1	COGs: COG0791 cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: tfu:Tfu_2262 cell wall-associated hydrolase (invasion-associated proteins); PFAM: NLP/P60 protein; SPTR: C1YLH8 cell wall-associated hydrolase, invasion-associated protein; PFAM: NlpC/P60 family
YP_003678527.1	COGs: COG0405 gamma-glutamyltransferase; InterPro IPR000101; KEGG: ami:Amir_0049 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; SPTR: C1YLH7 gamma-glutamyltransferase 2; PFAM: gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase
YP_003678528.1	KEGG: tfu:Tfu_2260 hypothetical protein; SPTR: C1YLH6  uncharacterized protein
YP_003678529.1	COGs: COG0584 glycerophosphoryl diester phosphodiesterase; InterPro IPR017946:IPR004129; KEGG: sen:SACE_4968 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase; SPTR: C1YLH5 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase family
YP_003678530.1	COGs: COG3616 amino acid aldolase or racemase; InterPro IPR001608; KEGG: sro:Sros_1553 hypothetical protein; PFAM: alanine racemase; SPTR: C1YLH4 Predicted amino acid aldolase or racemase; PFAM: alanine racemase, N-terminal domain
YP_003678531.1	COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR013781:IPR017853:IPR001540:IPR015883; KEGG: sco:SCO2943 sugar hydrolase; PFAM: glycoside hydrolase, family 20, catalytic core; PRIAM: beta-N-acetylhexosaminidase; SPTR: C1YLH3 N-acetyl-beta-hexosaminidase; PFAM: glycosyl hydrolase family 20, catalytic domain
YP_003678532.1	KEGG: tfu:Tfu_2256 hypothetical protein; SPTR: C1YLH2  uncharacterized protein
YP_003678533.1	COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: tfu:Tfu_2257 glucosyltransferase; PFAM: glycosyl transferase group 1; SPTR: C1YLH1 glycosyltransferase; PFAM: glycosyl transferases group 1
YP_003678534.1	KEGG: tfu:Tfu_2258 hypothetical protein; SPTR: C1YLH0  uncharacterized protein
YP_003678535.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: tfu:Tfu_2254 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: C1YLG9 transcriptional regulator, COG0583; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_003678536.1	COGs: COG0436 aspartate/tyrosine/aromatic aminotransferase; InterProIPR015424:IPR004839:IPR001176:IPR004838:IPR 015421; KEGG: tfu:Tfu_2253 aminotransferase; PFAM: aminotransferase class I and II; SPTR: C1YLG8 aminotransferase; PFAM: aminotransferase class I and II
YP_003678537.1	COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: cai:Caci_3283 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: C1YLG7 glycosyltransferase; PFAM: glycosyl transferases group 1
YP_003678538.1	KEGG: tfu:Tfu_2252  molybdopterin-guanine dinucleotide biosynthesis protein; SPTR: C1YLG6  uncharacterized protein
YP_003678539.1	COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: tfu:Tfu_2251 sodium:alanine symporter; PFAM: sodium:alanine symporter; SPTR: C1YLG5 amino acid carrier protein; TIGRFAM: amino acid carrier protein; PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein
YP_003678540.1	KEGG: mgi:Mflv_1987 hypothetical protein; SPTR: A4T6I8  uncharacterized protein
YP_003678541.1	KEGG: mlu:Mlut_07010 bacterial translation initiation factor 2 (bIF-2); SPTR: C5C9T1 translation initiation factor IF-2
YP_003678542.1	COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR020084:IPR000086:IPR015797; KEGG: mmi:MMAR_4841 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: C1YLG3 ADP-ribose pyrophosphatase; PFAM: NUDIX domain
YP_003678543.1	COGs: COG2188 transcriptional regulators; InterPro IPR011663:IPR000524:IPR011991; KEGG: sma:SAV_3736 regulatory protein KorSA; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SPTR: C1YLG2 transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_003678544.1	KEGG: tcu:Tcur_4529 hypothetical protein; SPTR: C1YLG1  uncharacterized protein
YP_003678545.1	KEGG: pmu:PM0740 hypothetical protein; SPTR: C9PPM5 Chaperone DnaJ
YP_003678546.1	COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543; KEGG: tcu:Tcur_4530 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; SPTR: C1YLG0 DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: FtsK/SpoIIIE family
YP_003678547.1	SPTR: C1YLF9  uncharacterized protein
YP_003678548.1	KEGG: sro:Sros_8665 hypothetical protein; SPTR: C1YLF8  uncharacterized protein; PFAM: protein of unknown function (DUF2637)
YP_003678549.1	KEGG: tye:THEYE_A1930 chaperone protein DnaJ; SPTR: C1YLF7  uncharacterized protein
YP_003678550.1	KEGG: hypothetical protein; SPTR: C1YLF6  uncharacterized protein
YP_003678553.1	KEGG: nfa:pnf2730 hypothetical protein; SPTR: C1YLF5  uncharacterized protein; PFAM: protein of unknown function (DUF3307)
YP_003678554.1	KEGG: tko:TK1313 hypothetical protein; SPTR: C1YLF4  uncharacterized protein
YP_003678555.1	KEGG: tcu:Tcur_4534 hypothetical protein; SPTR: C1YLF3  uncharacterized protein
YP_003678556.1	InterPro IPR009061; KEGG: saq:Sare_3570 excisionase/Xis, DNA-binding; SPTR: C1YLF2  uncharacterized protein
YP_003678557.1	COGs: COG4974 Site-specific recombinase XerD; InterPro IPR013762:IPR002104:IPR011010; KEGG: mav:MAV_2217 traSA:integrase fusion protein; PFAM: integrase family protein; SPTR: C1YLF1 Site-specific recombinase XerD; PFAM: Phage integrase family
YP_003678558.1	COGs: COG0351 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR004399:IPR013749; KEGG: tfu:Tfu_2250 phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1; SPTR: C1YLF0 phosphomethylpyrimidine kinase; hydroxymethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase
YP_003678559.1	COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: bcv:Bcav_2381 SNARE associated Golgi protein; PFAM: SNARE associated Golgi protein; SPTR: C1YLE9 Uncharacterized membrane-associated protein; PFAM: SNARE associated Golgi protein
YP_003678560.1	COGs: COG2035 membrane protein; InterPro IPR007163; KEGG: tfu:Tfu_2249 hypothetical protein; PFAM: protein of unknown function DUF368; SPTR: C1YLE8 Predicted membrane protein, COG2035; PFAM: Domain of unknown function (DUF368)
YP_003678561.1	COGs: COG0318 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: tfu:Tfu_2248 acyl-CoA synthetase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YLE7 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme
YP_003678562.1	COGs: COG4992 ornithine/acetylornithine aminotransferase; InterProIPR015424:IPR005814:IPR015422:IPR010164:IPR 015421; KEGG: tfu:Tfu_2247 aminotransferase; PFAM: aminotransferase class-III; SPTR: C1YLE6 aminotransferase; TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; TIGRFAM: ornithine aminotransferase
YP_003678563.1	InterPro IPR013831:IPR013830; KEGG: tfu:Tfu_2246 hypothetical protein; SPTR: C1YLE5  uncharacterized protein; PFAM: GDSL-like Lipase/acylhydrolase
YP_003678564.1	COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839:IPR015424:IPR001917:IPR015421; KEGG: sma:SAV_7094 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: C1YLE4 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase
YP_003678565.1	COGs: COG0161 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR015424:IPR005814:IPR005815:IPR015421; KEGG: sgr:SGR_6281 adenosylmethionine--8-amino-7-oxononanoate transaminase; PFAM: aminotransferase class-III; SPTR: C1YLE3 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase
YP_003678566.1	COGs: COG0132 Dethiobiotin synthetase; InterPro IPR004472; KEGG: sco:SCO1246 dithiobiotin synthetase; PRIAM: Dethiobiotin synthase; SPTR: C1YLE2 Dethiobiotin synthase; TIGRFAM: dethiobiotin synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase
YP_003678567.1	KEGG: sen:SACE_1731 hypothetical protein; SPTR: C1YLE1  uncharacterized protein; PFAM: Domain of unknown function (DUF3291)
YP_003678568.1	COGs: COG1167 transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterProIPR000524:IPR011991:IPR004839:IPR015424:IPR 015422:IPR015421; KEGG: sro:Sros_2586  transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; SPTR: C1YLE0 transcriptional regulator with HTH domain and aminotransferase domain; PFAM: Bacterial regulatory proteins, gntR family; aminotransferase class I and II
YP_003678569.1	COGs: COG0605 superoxide dismutase; InterPro IPR019831:IPR019832:IPR001189:IPR019833; KEGG: tfu:Tfu_0957 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: superoxide dismutase; SPTR: C1YLD9 superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain
YP_003678570.1	KEGG: xce:Xcel_2577 hypothetical protein; SPTR: C1YLD8 Predicted O-methyltransferase, COG4122
YP_003678571.1	InterPro IPR001173; KEGG: sro:Sros_1641 hypothetical protein; PFAM: glycosyl transferase family 2; SPTR: C1YLD7 glycosyl transferase
YP_003678572.1	InterPro IPR001173; KEGG: sro:Sros_1640 hypothetical protein; PFAM: glycosyl transferase family 2; SPTR: C1YLD6 glycosyl transferase; PFAM: glycosyl transferase family 2
YP_003678573.1	COGs: COG2030 acyl dehydratase; InterPro IPR002539; KEGG: tfu:Tfu_0958 hypothetical protein; PFAM: MaoC domain protein dehydratase; PRIAM: enoyl-CoA hydratase; SPTR: C1YLD5 acyl dehydratase; PFAM: MaoC like domain
YP_003678574.1	COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013342; KEGG: tfu:Tfu_0960 O-succinylbenzoate synthase; PFAM: mandelate racemase/muconate lactonizing protein; SPTR: C1YLD4 Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase; PFAM: mandelate racemase / muconate lactonizing enzyme, C-terminal domain; mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase
YP_003678575.1	COGs: COG0686 alanine dehydrogenase; InterPro IPR007886:IPR007698:IPR008141:IPR016040; KEGG: tfu:Tfu_0961 L-alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; PRIAM: alanine dehydrogenase; SPTR: C1YLD3 L-alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT, C-terminal domain; alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase
YP_003678576.1	COGs: COG0044 dihydroorotase and related cyclic amidohydrolase; InterPro IPR006680:IPR011059; KEGG: tfu:Tfu_0962 dihydroorotase; PFAM: amidohydrolase; SPTR: C1YLD1 dihydroorotase-like cyclic amidohydrolase; PFAM: Amidohydrolase family
YP_003678577.1	COGs: COG3336 membrane protein; InterPro IPR008457:IPR019108; KEGG: tfu:Tfu_0963 hypothetical protein; PFAM: cytochrome c oxidase caa3-type, assembly factor CtaG-related; copper resistance D domain protein; SPTR: C1YLD0 Predicted membrane protein, COG3336; PFAM: cytochrome C oxidase caa3 assembly factor (Caa3_CtaG); Copper resistance protein D
YP_003678578.1	KEGG: tfu:Tfu_0964 hypothetical protein; SPTR: C1YLC9  uncharacterized protein
YP_003678579.1	COGs: COG0419 ATPase involved in DNA repair; KEGG: sco:SCO1300 exonuclease; SPTR: C1YNN5  uncharacterized protein (Fragment); TIGRFAM: exonuclease SbcC
YP_003678580.1	COGs: COG0420 DNA repair exonuclease; InterPro IPR004843:IPR004593; KEGG: sro:Sros_6452 nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; SPTR: C1YNN4 exodeoxyribonuclease I subunit D; TIGRFAM: nuclease SbcCD, D subunit; PFAM: Calcineurin-like phosphoesterase; type 5 capsule protein repressor C terminal; TIGRFAM: exonuclease SbcD
YP_003678581.1	COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: tfu:Tfu_0966 caffeoyl-CoA O-methyltransferase; PFAM: O-methyltransferase family 3; SPTR: C1YNN3 Predicted O-methyltransferase, COG4122; PFAM: O-methyltransferase
YP_003678582.1	InterPro IPR007404; KEGG: tfu:Tfu_0967  integral membrane protein; PFAM: membrane-bound metal-dependent hydrolase; SPTR: C1YNN2 Predicted membrane-bound metal-dependent hydrolase (DUF457); PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457)
YP_003678583.1	COGs: COG0747 ABC-type dipeptide transporter periplasmic component; InterPro IPR017909:IPR000914; KEGG: sgr:SGR_1798  oligopeptide ABC transporter substrate-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: C1YNN0 ABC-type dipeptide transporter periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; TIGRFAM: Dyp-type peroxidase family
YP_003678584.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: sgr:SGR_1799  oligopeptide ABC transporter permease; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YNM9 ABC-type dipeptide/oligopeptide/nickel transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678585.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: sco:SCO5714 peptide transport permease; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YNM8 ABC-type dipeptide/oligopeptide/nickel transporter permease; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678586.1	COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transporter ATPase component; InterProIPR017871:IPR003439:IPR013563:IPR010066:IPR 003593; KEGG: sro:Sros_2085 ABC transporter ATP-binding component; PFAM: ABC transporter related; oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: C1YNM7 oligopeptide/dipeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter ATP-binding protein, C-terminal domain
YP_003678587.1	COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transporter ATPase component; InterProIPR017871:IPR003439:IPR013563:IPR010066:IPR 003593; KEGG: sco:SCO5712 ABC transporter ATP-binding protein; PFAM: ABC transporter related; oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: C1YNM6 ABC-type dipeptide/oligopeptide/nickel transporter ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region
YP_003678588.1	COGs: COG2162 Arylamine N-acetyltransferase; InterPro IPR001447; KEGG: sen:SACE_0058  acetyltransferase; PFAM: N-acetyltransferase; PRIAM: N-hydroxyarylamine O-acetyltransferase; SPTR: C1YNM5 Arylamine N-acetyltransferase; PFAM: N-acetyltransferase
YP_003678589.1	COGs: COG3572 gamma-glutamylcysteine synthetase; InterPro IPR017809:IPR006336; KEGG: tcu:Tcur_3641 glutamate/cysteine ligase family protein; PFAM: glutamate--cysteine ligase; SPTR: C1YNM4 glutamate--cysteine ligase family protein; TIGRFAM: glutamate/cysteine ligase family protein; PFAM: glutamate-cysteine ligase family 2(GCS2); TIGRFAM: glutamate--cysteine ligase, plant type; glutamate--cysteine ligase family protein
YP_003678590.1	COGs: COG1262 conserved hypothetical protein; InterPro IPR005532:IPR017806; KEGG: tcu:Tcur_3640 protein of unknown function DUF323; PFAM: protein of unknown function DUF323; SPTR: C1YNM3  uncharacterized protein; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: conserved hypothetical protein TIGR03440
YP_003678591.1	COGs: COG0121 glutamine amidotransferase; InterPro IPR017932:IPR017808; KEGG: tcu:Tcur_3639 glutamine amidotransferase, class-II; SPTR: C1YNM2  uncharacterized protein; TIGRFAM: conserved hypothetical protein TIGR03442
YP_003678592.1	COGs: COG4301 conserved hypothetical protein; InterPro IPR017804:IPR019257; KEGG: mgi:Mflv_1318 hypothetical protein; PFAM: protein of unknown function DUF2260; SPTR: C1YNM1 Probable methyltransferase; TIGRFAM: methyltransferase; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase
YP_003678593.1	COGs: COG0289 dihydrodipicolinate reductase; InterPro IPR000846:IPR011770:IPR016040; KEGG: tfu:Tfu_0786 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; PRIAM: dihydrodipicolinate reductase; SPTR: C1YNM0 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase, N-terminus; dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase
YP_003678594.1	COGs: COG2226 methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013217; KEGG: tfu:Tfu_1751  methyltransferase; PFAM: methyltransferase type 12; SPTR: C1YNL9 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain
YP_003678595.1	COGs: COG1575 1 4-dihydroxy-2-naphthoate octaprenyltransferase; InterPro IPR000537:IPR004657; KEGG: tfu:Tfu_0788 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; SPTR: C1YNL8 1,4-dihydroxy-2-naphtoate prenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
YP_003678596.1	InterPro IPR000182:IPR016181; KEGG: tfu:Tfu_0789 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YNL7 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003678597.1	COGs: COG1950 membrane protein; InterPro IPR007165; KEGG: tfu:Tfu_0790 hypothetical protein; PFAM: membrane protein of unknown function; SPTR: C1YNL6 Predicted membrane protein, COG1950; PFAM: membrane protein of unknown function
YP_003678598.1	COGs: COG0329 dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterProIPR005263:IPR002220:IPR020625:IPR013785:IPR 020624; KEGG: tfu:Tfu_0791 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; SPTR: C1YNL5 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase
YP_003678599.1	COGs: COG0595 hydrolase of the metallo-beta-lactamase superfamily; InterPro IPR011108:IPR001279; KEGG: tfu:Tfu_0792 metallo-beta-lactamase family hydrolase; PFAM: RNA-metabolising metallo-beta-lactamase; SMART: beta-lactamase; SPTR: C1YNL4 Predicted hydrolase of the metallo-beta-lactamase superfamily; PFAM: metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein
YP_003678600.1	COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR018541:IPR003593; KEGG: tfu:Tfu_0793 ATPase; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; SPTR: C1YNL3 DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family
YP_003678601.1	KEGG: sgr:SGR_1770 hypothetical protein; SPTR: C1YNL1  uncharacterized protein
YP_003678602.1	COGs: COG0621 2-methylthioadenine synthetase; InterProIPR005839:IPR013848:IPR005840:IPR007197:IPR 013785:IPR002792:IPR006638; KEGG: tfu:Tfu_0795 hypothetical protein; PFAM: protein of unknown function UPF0004 ; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C1YNL0 30S ribosomal protein S12P methylthiotransferase; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme YliG, TIGR01125; RNA modification enzyme, MiaB family
YP_003678603.1	COGs: COG0558 phosphatidylglycerophosphate synthase; InterPro IPR000462:IPR004570; KEGG: tfu:Tfu_0796 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: C1YNK9 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_003678604.1	COGs: COG1546 Uncharacterized protein (competence- and mitomycin-induced); InterPro IPR008136; KEGG: tfu:Tfu_0797 competence/damage-inducible protein CinA; PFAM: damage inducible protein CinA; SPTR: C1YNK8 Competence/damage-inducible protein cinA; PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain
YP_003678605.1	InterPro IPR001387:IPR010982; KEGG: tfu:Tfu_0798 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YNK7 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003678606.1	COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: tfu:Tfu_0800 BadM/Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074; SPTR: C1YNK6 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: transcriptional regulator; TIGRFAM: rrf2 family protein ( transcriptional regulator)
YP_003678607.1	COGs: COG1472 beta-glucosidase-related glycosidase; InterPro IPR001764:IPR017853:IPR019800; KEGG: sro:Sros_2191 beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase family 3 domain protein; SPTR: C1YNK5 beta-glucosidase-like glycosyl hydrolase; PFAM: glycosyl hydrolase family 3 N terminal domain
YP_003678608.1	COGs: COG0395 ABC-type sugar transporter permease component; InterPro IPR000515; KEGG: sro:Sros_2192  sugar ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YNK4 carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003678609.1	COGs: COG1175 ABC-type sugar transporters permease components; InterPro IPR000515; KEGG: sro:Sros_2193 binding-protein-dependent transporters inner membrane component; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YNK3 carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678610.1	COGs: COG1653 ABC-type sugar transporter periplasmic component; InterPro IPR006059; KEGG: sro:Sros_2194 ABC-type sugar transport system periplasmic component-like protein; PFAM: extracellular solute-binding protein family 1; SPTR: C1YNK2 carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein
YP_003678611.1	COGs: COG1940 transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: sro:Sros_2180 transcriptional regulator ROK family; PFAM: ROK family protein; SPTR: C1YNK1 transcriptional regulator/sugar kinase; PFAM: ROK family
YP_003678612.1	InterPro IPR000182:IPR016181; KEGG: tfu:Tfu_0801 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YNK0 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003678613.1	COGs: COG2128 conserved hypothetical protein; InterPro IPR004675:IPR003779; KEGG: nfa:nfa5000 hypothetical protein; PFAM: carboxymuconolactone decarboxylase; SPTR: C1YNJ9 Alkylhydroperoxidase AhpD family core domain; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain
YP_003678614.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013324:IPR013249:IPR013325:IPR014284:IPR 007627; KEGG: nfa:nfa4970  sigma factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: C1YNJ8 RNA polymerase, sigma subunit, ECF family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003678615.1	COGs: COG1201 Lhr-like helicase; InterProIPR011545:IPR001650:IPR013701:IPR014001:IPR 003593:IPR014021; KEGG: fra:Francci3_3527 DEAD/DEAH box helicase-like; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase; helicase; SMART: DEAD-like helicase ; ATPase AAA; helicase domain protein; SPTR: C1YNJ6 ATP dependent helicase, Lhr family; PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase
YP_003678616.1	KEGG: tfu:Tfu_0802 hypothetical protein; SPTR: C1YNJ5  uncharacterized protein; PFAM: protein of unknown function (DUF3046)
YP_003678617.1	COGs: COG0468 RecA/RadA recombinase; InterProIPR020584:IPR013765:IPR003593:IPR020588:IPR 020587:IPR001553; KEGG: xce:Xcel_1242 RecA protein; PFAM: RecA domain protein; SMART: ATPase AAA; SPTR: C1YNJ4 protein recA; TIGRFAM: recA protein; PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA
YP_003678618.1	COGs: COG2137 conserved hypothetical protein; InterPro IPR003783; KEGG: tfu:Tfu_0804 recombination regulator RecX; PFAM: regulatory protein RecX; SPTR: C1YNJ3 Uncharacterized conserved protein; PFAM: RecX family
YP_003678619.1	COGs: COG1506 dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR001375:IPR011042; KEGG: tfu:Tfu_0806  acyl-peptide hydrolase; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; SPTR: C1YNJ2 dipeptidyl aminopeptidase/acylaminoacyl peptidase; PFAM: prolyl oligopeptidase family
YP_003678620.1	COGs: COG0765 ABC-type amino acid transporter permease; InterPro IPR010065:IPR000515; KEGG: tfu:Tfu_0807 amino acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YNJ1 amino acid ABC transporter membrane protein 2, PAAT family; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: Binding-protein-dependent transporter inner membrane component; TIGRFAM: amine acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family
YP_003678621.1	COGs: COG0765 ABC-type amino acid transporter permease; InterPro IPR010065:IPR000515; KEGG: tfu:Tfu_0808 amino acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YNJ0 amino acid ABC transporter membrane protein 1, PAAT family; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: Binding-protein-dependent transporter inner membrane component; TIGRFAM: amine acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family
YP_003678622.1	COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: tfu:Tfu_0809 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: C1YNI9 amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_003678623.1	COGs: COG1126 ABC-type polar amino acid transporter ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: tfu:Tfu_0810 ABC-type polar amino acid transporter ATPase component; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YNI8 amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter
YP_003678624.1	COGs: COG0621 2-methylthioadenine synthetase; InterProIPR013848:IPR007197:IPR005839:IPR006463:IPR 006638:IPR002792:IPR013785; KEGG: tfu:Tfu_0811 tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: protein of unknown function UPF0004 ; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C1YNI7 tRNA-i(6)A37 thiotransferase enzyme MiaB; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family
YP_003678625.1	COGs: COG2124 cytochrome P450; InterPro IPR017972:IPR001128:IPR002397; KEGG: saq:Sare_4557 cytochrome P450; PFAM: cytochrome P450; SPTR: C1YNI6 cytochrome P450; PFAM: cytochrome P450
YP_003678626.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sen:SACE_0230  HTH-type transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YNI5 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003678627.1	COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro IPR018022:IPR002627; KEGG: tfu:Tfu_0815 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; PRIAM: tRNA isopentenyltransferase; SPTR: C1YNI4 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: IPP transferase; TIGRFAM: tRNA isopentenyltransferase (miaA)
YP_003678628.1	COGs: COG0253 diaminopimelate epimerase; InterPro IPR018510:IPR001653; KEGG: tfu:Tfu_0816 diaminopimelate epimerase; PFAM: diaminopimelate epimerase; PRIAM: diaminopimelate epimerase; SPTR: C1YNI3 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase
YP_003678629.1	KEGG: fal:FRAAL5434 hypothetical protein; SPTR: C1YNI2  uncharacterized protein
YP_003678630.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013324:IPR013249:IPR013325:IPR014284:IPR 007627; KEGG: sgr:SGR_872 RNA polymerase ECF-subfamily sigma factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: C1YNI1 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003678631.1	COGs: COG0247 Fe-S oxidoreductase; InterProIPR017900:IPR001450:IPR004017:IPR017896:IPR 012285:IPR009051:IPR012257; KEGG: tcu:Tcur_3273 protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C1YNI0 Fe-S oxidoreductase; PFAM: Cysteine-rich domain
YP_003678632.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113:IPR016166:IPR016168; KEGG: tcu:Tcur_3272 FAD linked oxidase domain protein; PFAM: FAD linked oxidase; SPTR: C1YNH9 FAD/FMN-dependent dehydrogenase; PFAM: FAD binding domain
YP_003678633.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR016166:IPR016164:IPR016167:IPR006094:IPR 004113; KEGG: sen:SACE_6366 glycolate oxidase subunit; PFAM: FAD linked oxidase domain protein; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: C1YNH8 FAD/FMN-dependent dehydrogenase; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase subunit GlcD
YP_003678634.1	COGs: COG2225 malate synthase; InterPro IPR019830:IPR011076:IPR006252; KEGG: tfu:Tfu_0819 malate synthase; PFAM: malate synthase family protein; PRIAM: malate synthase; SPTR: C1YNH7 malate synthase; TIGRFAM: malate synthase A; PFAM: malate synthase; TIGRFAM: malate synthase A
YP_003678635.1	COGs: COG2262 GTPase; InterPro IPR016496:IPR002917:IPR005225:IPR006073; KEGG: tfu:Tfu_0820 small GTP-binding protein domain-containing protein; PFAM: GTP-binding protein HSR1-related; SPTR: C1YNH6 GTP-binding protein HflX; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain
YP_003678636.1	COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR005920:IPR006680:IPR011059; KEGG: tfu:Tfu_0821 imidazolonepropionase; PFAM: amidohydrolase; PRIAM: Imidazolonepropionase; SPTR: C1YNH5 Imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase
YP_003678637.1	COGs: COG1466 DNA polymerase III subunit delta; InterPro IPR008921:IPR005790:IPR010372; KEGG: tfu:Tfu_0823 DNA polymerase III delta subunit; PFAM: DNA polymerase III delta; SPTR: C1YNH4 DNA polymerase III delta subunit; TIGRFAM: DNA polymerase III subunit delta; PFAM: DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III subunit delta
YP_003678638.1	COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily); InterPro IPR004477; KEGG: tfu:Tfu_0825 ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; SPTR: C1YNH3 ComEC/Rec2-related protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: Competence protein; metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2
YP_003678639.1	COGs: COG1555 DNA uptake protein and related DNA-binding protein; InterPro IPR019554:IPR000445; KEGG: tfu:Tfu_0826 helix-hairpin-helix DNA-binding, class 1; PFAM: Soluble ligand binding domain; helix-hairpin-helix motif; SPTR: C1YNH2 DNA uptake protein; PFAM: SLBB domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein
YP_003678640.1	InterPro IPR002583; KEGG: tfu:Tfu_0827 30S ribosomal protein S20P; PFAM: ribosomal protein S20; SPTR: C1YNH1 30S ribosomal protein S20P; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; TIGRFAM: ribosomal protein S20
YP_003678641.1	KEGG: tfu:Tfu_0828 hypothetical protein; SPTR: C1YNH0  uncharacterized protein
YP_003678642.1	COGs: COG0481 membrane GTPase LepA; InterProIPR000795:IPR004161:IPR000640:IPR013842:IPR 005225:IPR006297:IPR009022:IPR009000; KEGG: tfu:Tfu_0829 GTP-binding protein LepA; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; SPTR: C1YNG9 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain
YP_003678643.1	COGs: COG3833 ABC-type maltose transporters permease component; InterPro IPR000515; KEGG: tfu:Tfu_0830 multiple sugar transport system permease; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YNG8 carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678644.1	COGs: COG1175 ABC-type sugar transporters permease components; InterPro IPR000515; KEGG: tfu:Tfu_0831 multiple sugar transport system permease; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YNG7 carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678645.1	COGs: COG2182 maltose-binding periplasmic protein/domains; InterPro IPR006650:IPR006059:IPR006060; KEGG: tfu:Tfu_0832 multiple sugar transporter substrate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: C1YNG6 carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein
YP_003678646.1	COGs: COG0366 glycosidase; InterPro IPR006047:IPR006589:IPR013781:IPR017853; KEGG: tfu:Tfu_0833 alpha-glucosidase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: C1YNG5 glycosidase; PFAM: alpha amylase, catalytic domain
YP_003678647.1	COGs: COG1609 transcriptional regulators; InterPro IPR000843:IPR001761:IPR010982; KEGG: tfu:Tfu_0834 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: C1YNG4 LacI family transcriptional regulator; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003678648.1	COGs: COG0635 coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterProIPR007197:IPR010723:IPR006638:IPR013785:IPR 004559; KEGG: tfu:Tfu_0835 coproporphyrinogen III oxidase; PFAM: HemN domain protein; radical SAM protein; PRIAM: coproporphyrinogen dehydrogenase; SMART: Elongator protein 3/MiaB/NifB; SPTR: C1YNG3 coproporphyrinogen III oxidase anaerobic; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: radical SAM superfamily; HemN C-terminal region; TIGRFAM:  oxygen-independent coproporphyrinogen III oxidase
YP_003678649.1	COGs: COG3296 conserved hypothetical protein; KEGG: sro:Sros_2286 hypothetical protein; SPTR: C1YNG2 Uncharacterized conserved protein; PFAM: chloroplast import component protein (Tic20)
YP_003678650.1	COGs: COG3296 conserved hypothetical protein; KEGG: GK17443 gene product from transcript GK17443-RA; SPTR: C1YNG1 Uncharacterized conserved protein
YP_003678651.1	KEGG: sro:Sros_2287 hypothetical protein; SPTR: C1YNG0  uncharacterized protein; PFAM: protein of unknown function (DUF3097)
YP_003678652.1	COGs: COG1420 transcriptional regulator of heat shock gene; InterPro IPR001034:IPR002571:IPR011991; KEGG: tfu:Tfu_0838 heat-inducible transcription repressor; PFAM: negative regulator of class I heat shock protein; regulatory protein DeoR; SPTR: C1YNF9 heat-inducible transcription repressor HrcA; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: DeoR-like helix-turn-helix domain; HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA
YP_003678653.1	COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterProIPR018253:IPR001623:IPR001305:IPR002939:IPR 012724:IPR003095:IPR008971; KEGG: tfu:Tfu_0839 heat shock protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: C1YNF8 Chaperone protein dnaJ; TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ
YP_003678654.1	COGs: COG1385 conserved hypothetical protein; InterPro IPR006700:IPR015947; KEGG: tfu:Tfu_0840 hypothetical protein; PFAM: protein of unknown function DUF558; SPTR: C1YNF7  uncharacterized protein; PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family
YP_003678655.1	KEGG: tfu:Tfu_0841 hypothetical protein; SPTR: C1YNF6  uncharacterized protein
YP_003678656.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013324:IPR013249:IPR013325:IPR014284:IPR 007627:IPR014325; KEGG: tfu:Tfu_0842 RNA polymerase ECF-subfamily sigma factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: C1YNF5 RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, sigma-E family; TIGRFAM: RNA polymerase sigma-70 factor, sigma-E family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-E family
YP_003678657.1	COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310:IPR011151:IPR011146; KEGG: tcu:Tcur_3248 histidine triad (HIT) protein; PFAM: histidine triad (HIT) protein; SPTR: C1YNF4 HIT family hydrolase, diadenosine tetraphosphate hydrolase; PFAM: Scavenger mRNA decapping enzyme C-term binding
YP_003678658.1	COGs: COG1702 phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714:IPR004087; KEGG: tfu:Tfu_0844 phosphate starvation-inducible protein PhoH ATPase; PFAM: PhoH family protein; SMART: KH domain protein; SPTR: C1YNF3 phosphate starvation-inducible protein PhoH, predicted ATPase; PFAM: PhoH-like protein
YP_003678659.1	COGs: COG0319 metal-dependent hydrolase; InterPro IPR020549:IPR002036; KEGG: tfu:Tfu_0845  metalloprotease; PFAM: protein of unknown function UPF0054; SPTR: C1YNF2  uncharacterized protein; PFAM: Uncharacterized protein family UPF0054; TIGRFAM: conserved hypothetical protein TIGR00043
YP_003678660.1	COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644:IPR005170; KEGG: tfu:Tfu_0846 CBS domain-containing protein; PFAM: hypothetical protein; protein of unknown function DUF21; transporter-associated region; SPTR: C1YNF1 CBS domain-containing protein; PFAM: CBS domain; Domain of unknown function DUF21; transporter associated domain
YP_003678661.1	KEGG: tfu:Tfu_0847 hypothetical protein; SPTR: C1YNF0  uncharacterized protein
YP_003678662.1	COGs: COG1159 GTPase; InterProIPR015946:IPR004044:IPR002917:IPR005225:IPR 009019:IPR003593:IPR005662; KEGG: tfu:Tfu_0848 GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; SMART: AAA ATPase; SPTR: C1YNE9 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain
YP_003678663.1	COGs: COG1414 transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: tfu:Tfu_0849 regulatory proteins, IclR; PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; SPTR: C1YNE8 IclR family transcriptional regulator; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_003678664.1	InterPro IPR015813; KEGG: sma:SAV_1478 hypothetical protein; SPTR: C1YNE7 citrate lyase subunit beta
YP_003678665.1	COGs: COG0044 dihydroorotase and related cyclic amidohydrolase; InterPro IPR017593:IPR006680:IPR011059; KEGG: aau:AAur_3510 allantoinase; PFAM: amidohydrolase; SPTR: C1YNE5 Allantoinase; TIGRFAM: allantoinase; PFAM: Amidohydrolase family; TIGRFAM: allantoinase; dihydroorotase
YP_003678666.1	COGs: COG4266 Allantoicase; InterPro IPR005164:IPR008979:IPR015908; KEGG: sgr:SGR_1288 allantoicase; PFAM: Allantoicase region; PRIAM: Allantoicase; SPTR: C1YNE4 Allantoicase; TIGRFAM: allantoicase; PFAM: Allantoicase repeat; TIGRFAM: allantoicase
YP_003678667.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: sco:SCO2644 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: C1YNE3 transcriptional regulator, COG0583; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_003678668.1	COGs: COG2233 xanthine/uracil permease; InterPro IPR006042:IPR017588:IPR006043; KEGG: rop:ROP_12700  uric acid permease; PFAM: xanthine/uracil/vitamin C permease; SPTR: C1YNE2 uracil-xanthine permease; TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: Permease family; TIGRFAM: uracil-xanthine permease; xanthine permease
YP_003678669.1	COGs: COG3648 Uricase (urate oxidase); InterPro IPR019842:IPR002042; KEGG: rop:ROP_12690 uricase; PFAM: Uricase; PRIAM: Urate oxidase; SPTR: C1YNE1 Uricase; TIGRFAM: urate oxidase; PFAM: Uricase; TIGRFAM: urate oxidase
YP_003678670.1	COGs: COG2351 transthyretin-like protein; InterPro IPR000895:IPR014306; KEGG: sen:SACE_6735 transthyretin; PFAM: transthyretin; SMART: transthyretin; SPTR: C1YNE0 transthyretin; TIGRFAM: hydroxyisourate hydrolase; PFAM: HIUase/transthyretin family; TIGRFAM: hydroxyisourate hydrolase
YP_003678671.1	COGs: COG3195 conserved hypothetical protein; InterPro IPR018020; KEGG: sen:SACE_6734  allantoicase (allantoate amidinohydrolase) (partial match); PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; SPTR: C1YND9 Uncharacterized conserved protein; PFAM: OHCU decarboxylase; TIGRFAM: OHCU decarboxylase
YP_003678672.1	COGs: COG3622 hydroxypyruvate isomerase; InterPro IPR013022:IPR012307; KEGG: bfa:Bfae_08170 hydroxypyruvate isomerase; PFAM: xylose isomerase; PRIAM: hydroxypyruvate isomerase; SPTR: C1YND8 hydroxypyruvate isomerase; PFAM: Xylose isomerase-like TIM barrel
YP_003678673.1	COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterProIPR002204:IPR006115:IPR006398:IPR006183:IPR 016040:IPR013328:IPR008927; KEGG: rha:RHA1_ro02575 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; SPTR: C1YND7 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase
YP_003678674.1	COGs: COG3960 glyoxylate carboligase; InterPro IPR012001:IPR012000:IPR011766; KEGG: cai:Caci_4728 thiamine pyrophosphate protein TPP binding domain protein; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; SPTR: C1YND6 glyoxylate carboligase; PFAM: thiamine pyrophosphate enzyme, central domain; thiamine pyrophosphate enzyme, N-terminal TPP binding domain; thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: glyoxylate carboligase; acetolactate synthase large subunit
YP_003678675.1	KEGG: rer:RER_50790 ABC transporter substrate-binding protein; SPTR: C1YND5  uncharacterized protein
YP_003678676.1	COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155:IPR013785; KEGG: sro:Sros_5779 morphinone reductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase; SPTR: C1YND4 NADH:flavin oxidoreductase; PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_003678677.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterProIPR006162:IPR002034:IPR000891:IPR013709:IPR 005668:IPR013785; KEGG: tfu:Tfu_0850 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; SPTR: C1YND3 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, yeast type
YP_003678678.1	KEGG: cai:Caci_7299 hypothetical protein; SPTR: C1YND2  uncharacterized protein; PFAM: protein of unknown function DUF2625
YP_003678679.1	COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: tfu:Tfu_0851 hypothetical protein; PFAM: SCP-like extracellular; SPTR: C1YND1 SCP-like extracellular protein; PFAM: Cysteine-rich secretory protein family
YP_003678680.1	COGs: COG1381 recombinational DNA repair protein (RecF pathway); InterPro IPR003717; KEGG: tfu:Tfu_0852 DNA repair protein RecO; PFAM: recombination protein O RecO; SPTR: C1YND0 DNA replication and repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: recombination protein O C terminal; recombination protein O N terminal; TIGRFAM: DNA repair protein RecO
YP_003678681.1	COGs: COG0020 undecaprenyl pyrophosphate synthase; InterPro IPR018520:IPR001441; KEGG: tfu:Tfu_0853 undecaprenyl pyrophosphate synthetase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: C1YNC9 undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM:  undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase
YP_003678682.1	COGs: COG2755 lysophospholipase L1 and related esterase; InterPro IPR001087:IPR013831:IPR013830; KEGG: tfu:Tfu_0854 hypothetical protein; PFAM: lipolytic protein G-D-S-L family; SPTR: C1YNC8 lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/acylhydrolase
YP_003678683.1	COGs: COG2755 lysophospholipase L1 and related esterase; InterPro IPR001087:IPR013831:IPR013830; KEGG: tfu:Tfu_0855 hypothetical protein; PFAM: lipolytic protein G-D-S-L family; SPTR: C1YNC7 lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/acylhydrolase
YP_003678684.1	KEGG: protein kinase family protein; SPTR: C1YNC5  uncharacterized protein
YP_003678685.1	COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: tfu:Tfu_0856 zinc uptake regulator; PFAM: ferric-uptake regulator; SPTR: C1YNC4 Zinc uptake regulator, Fur family; PFAM: ferric uptake regulator family
YP_003678686.1	COGs: COG1108 ABC-type Mn2+/Zn2+ transporters permeases; InterPro IPR001626; KEGG: sro:Sros_2341 hypothetical protein; PFAM: ABC transporter; SPTR: C1YNC3 ABC-type Mn2+/Zn2+ transporter permease; PFAM: ABC 3 transport family
YP_003678687.1	COGs: COG1121 ABC-type Mn/Zn transporters ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: tcu:Tcur_3228 ABC transporter related protein; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YNC2 ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter
YP_003678688.1	KEGG: tfu:Tfu_0859 hypothetical protein; SPTR: C1YNC1  uncharacterized protein
YP_003678689.1	COGs: COG1887  glycosyl/glycerophosphate transferase involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC; InterPro IPR007554; KEGG: sco:SCO2590 glycosyltransferase; PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; PRIAM: CDP-glycerol glycerophosphotransferase; SPTR: C1YNC0 glycosyl/glycerophosphate transferase, teichoic acid biosynthesis; PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
YP_003678690.1	InterPro IPR007138:IPR011008; KEGG: tfu:Tfu_0860 hypothetical protein; PFAM: antibiotic biosynthesis monooxygenase; SPTR: C1YNB9 antibiotic biosynthesis monooxygenase; PFAM: antibiotic biosynthesis monooxygenase
YP_003678691.1	COGs: COG0423 glycyl-tRNA synthetase (class II); InterProIPR019825:IPR002314:IPR004154:IPR002315:IPR 006195; KEGG: tfu:Tfu_0861 glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); anticodon-binding domain protein; SPTR: Q47RL8 glycyl-tRNA synthetase; TIGRFAM: glycyl-tRNA synthetase; PFAM: anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type
YP_003678692.1	InterPro IPR009002:IPR011576; KEGG: bcv:Bcav_3628 pyridoxamine 5'-phosphate oxidase-related protein FMN-binding; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: C1YNB5 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase
YP_003678693.1	COGs: COG1695 transcriptional regulator protein; InterPro IPR005149:IPR011991; KEGG: rha:RHA1_ro00244 hypothetical protein; PFAM: transcriptional regulator PadR family protein; SPTR: C1YNB4 transcriptional regulator, PadR family; PFAM: transcriptional regulator PadR-like family
YP_003678694.1	KEGG: xce:Xcel_1409 hypothetical protein; SPTR: C1YNB3  uncharacterized protein
YP_003678695.1	COGs: COG1272 membrane protein hemolysin III homolog; InterPro IPR004254:IPR005744; KEGG: tfu:Tfu_0862 HylII; PFAM: Hly-III family protein; SPTR: C1YNB2 Channel protein, hemolysin III family; TIGRFAM: channel protein, hemolysin III family; PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family
YP_003678696.1	COGs: COG0574 phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterProIPR018274:IPR002192:IPR008279:IPR000121:IPR 010121:IPR013815:IPR013816:IPR015813; KEGG: tfu:Tfu_0863 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; SPTR: C1YNB1 pyruvate phosphate dikinase; TIGRFAM: pyruvate, phosphate dikinase; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase
YP_003678697.1	COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: tfu:Tfu_0864 hypothetical protein; PFAM: protein of unknown function DUF218; SPTR: C1YNA9 Uncharacterized conserved protein; PFAM: DUF218 domain
YP_003678698.1	COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR003607:IPR006261:IPR006674; KEGG: tfu:Tfu_0865 deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: C1YNA8 deoxyguanosinetriphosphate triphosphohydrolase, TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, ; uncharacterized domain HDIG
YP_003678699.1	COGs: COG1609 transcriptional regulators; InterPro IPR018247:IPR000843:IPR001761:IPR010982; KEGG: sro:Sros_6224 HTH-type transcriptional repressor PurR; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: C1YNA7 LacI family transcriptional regulator; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003678700.1	COGs: COG1069 ribulose kinase; InterPro IPR018483:IPR018484:IPR018485:IPR005929; KEGG: nca:Noca_0380 ribulokinase; PFAM: carbohydrate kinase, FGGY-like; SPTR: C1YNA6 Ribulokinase; TIGRFAM: L-ribulokinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: L-ribulokinase
YP_003678701.1	COGs: COG0235 ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: cai:Caci_4714 class II aldolase/adducin family protein; PFAM: class II aldolase/adducin family protein; SPTR: C1YNA5 ribulose-5-phosphate 4-epimerase-like epimerase or aldolase; PFAM: class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase
YP_003678702.1	COGs: COG2160 L-arabinose isomerase; InterPro IPR003762:IPR009015; KEGG: cce:Ccel_1033 L-arabinose isomerase; PFAM: L-arabinose isomerase; PRIAM: L-arabinose isomerase; SPTR: C1YNA4 L-arabinose isomerase; PFAM: L-arabinose isomerase; L-arabinose isomerase C-terminal domain
YP_003678703.1	COGs: COG1653 ABC-type sugar transporter periplasmic component; InterPro IPR017909; KEGG: cms:CMS_0051  extracellular solute-binding protein; SPTR: C1YNA3 carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein
YP_003678704.1	COGs: COG1175 ABC-type sugar transporters permease components; InterPro IPR000515; KEGG: sco:SCO7504 integral membrane binding-protein-dependent transporter; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YNA2 carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678705.1	COGs: COG0395 ABC-type sugar transporter permease component; InterPro IPR000515; KEGG: bfa:Bfae_29400 carbohydrate ABC transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YNA1 carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003678706.1	COGs: COG3534 alpha-L-arabinofuranosidase; InterPro IPR010720:IPR017853; KEGG: bcv:Bcav_3261 alpha-N-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; SMART: alpha-L-arabinofuranosidase domain protein; SPTR: C1YNA0 alpha-L-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase C-terminus
YP_003678707.1	COGs: COG4213 ABC-type xylose transporter periplasmic component; InterPro IPR001761; KEGG: bha:BH3442 multiple sugar transporter (multiple sugar-binding protein); PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: C1YN98 Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: family
YP_003678708.1	COGs: COG1129 ABC-type sugar transporter ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: gtn:GTNG_1800 L-arabinose transport, ATP binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YN97 Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter
YP_003678709.1	COGs: COG4214 ABC-type xylose transporter permease component; InterPro IPR001851; KEGG: gtn:GTNG_1799 L-arabinose membrane permease; PFAM: inner-membrane translocator; SPTR: C1YN96 Multiple monosaccharide ABC transporter membrane protein; PFAM: Branched-chain amino acid transporter / permease
YP_003678710.1	InterPro IPR002035; KEGG: ami:Amir_2484 von Willebrand factor type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: C1YN95 von Willebrand factor type A-like protein; PFAM: von Willebrand factor type A domain
YP_003678711.1	KEGG: nfa:nfa26410 hypothetical protein; SPTR: C1YN94  uncharacterized protein
YP_003678712.1	COGs: COG0358 DNA primase; InterProIPR002694:IPR013264:IPR006171:IPR019475:IPR 006295:IPR006154:IPR013173; KEGG: tfu:Tfu_0866 DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase, DnaB-helicase binding domain; SMART: zinc finger CHC2-family protein; Toprim sub domain protein; DNA primase DnaG DnaB-binding; SPTR: C1YN93 DNA primase; TIGRFAM: DNA primase; PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core
YP_003678713.1	COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR000943:IPR005479:IPR009042:IPR007627:IPR 007624:IPR007630:IPR014284:IPR012760:IPR011991:IPR013325:I PR013324; KEGG: sro:Sros_2352 RNA polymerase sigma factor RpoD; PFAM: sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; SPTR: C1YN92 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain
YP_003678714.1	COGs: COG3325 chitinase; InterProIPR001579:IPR001223:IPR011583:IPR013781:IPR 017853; KEGG: tfu:Tfu_0868 glycosyl hydrolase family chitinase; PFAM: glycoside hydrolase family 18; PRIAM: chitinase; SMART: chitinase II; SPTR: C1YN91 chitinase; PFAM: glycosyl hydrolases family 18
YP_003678715.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR016166:IPR016164:IPR016167:IPR004017:IPR 004113:IPR017900:IPR006094; KEGG: svi:Svir_08570 FAD/FMN-dependent dehydrogenase; PFAM: FAD linked oxidase; protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: C1YN90 FAD/FMN-dependent dehydrogenase; PFAM: Cysteine-rich domain; FAD binding domain; FAD linked oxidases, C-terminal domain
YP_003678716.1	KEGG: sen:SACE_5534 secreted protein; SPTR: C1YN89  uncharacterized protein; PFAM: TM1410 hypothetical-related protein
YP_003678717.1	KEGG: tfu:Tfu_0870 hypothetical protein; SPTR: C1YN88  uncharacterized protein
YP_003678718.1	KEGG: tfu:Tfu_0871 hypothetical protein; SPTR: C1YN87  uncharacterized protein
YP_003678719.1	InterPro IPR017985:IPR006764; KEGG: sen:SACE_4524 hypothetical protein; PFAM: protein of unknown function DUF574; SPTR: C1YN84  uncharacterized protein; PFAM: protein of unknown function (DUF574)
YP_003678720.1	COGs: COG1985 Pyrimidine reductase riboflavin biosynthesis; InterPro IPR002734; KEGG: tcu:Tcur_1829 bifunctional deaminase-reductase domain protein; PFAM: bifunctional deaminase-reductase domain protein; SPTR: C1YN83 Pyrimidine reductase, riboflavin biosynthesis; PFAM: RibD C-terminal domain; TIGRFAM: riboflavin-specific deaminase C-terminal domain
YP_003678721.1	COGs: COG0117 Pyrimidine deaminase; InterPro IPR002125:IPR016193; KEGG: tfu:Tfu_0877 5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: C1YN82 Pyrimidine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_003678722.1	KEGG: hypothetical protein; SPTR: C1YN81  uncharacterized protein
YP_003678723.1	COGs: COG4581 Superfamily II RNA helicase; InterProIPR018039:IPR011545:IPR001650:IPR014001:IPR 014021; KEGG: tfu:Tfu_0878 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; PFAM: DEAD/DEAH box helicase; helicase; SMART: DEAD-like helicase ; helicase; SPTR: C1YN80 Superfamily II RNA helicase; PFAM: Domain of unknown function (DUF3516); Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_003678724.1	COGs: COG0039 malate/lactate dehydrogenase; InterProIPR001252:IPR015955:IPR016040:IPR001236:IPR 010945:IPR001557; KEGG: ami:Amir_6492 malate dehydrogenase; PFAM: lactate/malate dehydrogenase; SPTR: C1YN79 malate dehydrogenase; TIGRFAM: malate dehydrogenase; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase
YP_003678725.1	InterPro IPR001087:IPR013831:IPR013830; KEGG: sma:SAV_1965 secreted protein; PFAM: lipolytic protein G-D-S-L family; SPTR: C1YN78 lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/acylhydrolase
YP_003678726.1	InterPro IPR001647:IPR011075:IPR009057; KEGG: tfu:Tfu_0906 hypothetical protein; PFAM: regulatory protein TetR; SPTR: C1YN77 transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003678727.1	COGs: COG0584 glycerophosphoryl diester phosphodiesterase; InterPro IPR004129:IPR017946; KEGG: sma:SAV_2596 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase; SPTR: C1YN76 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase family
YP_003678728.1	COGs: COG1349 transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR018356:IPR014036; KEGG: tfu:Tfu_0907 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: C1YN75 transcriptional regulator of sugar metabolism; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_003678729.1	InterPro IPR004360; KEGG: tfu:Tfu_0908 hypothetical protein; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YN74 Predicted ring-cleavage extradiol dioxygenase; PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003678730.1	InterPro IPR011701:IPR016196; KEGG: ach:Achl_2304 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: C1YN73 Major Facilitator Superfamily transporter
YP_003678731.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: sco:SCO3225 two component sensor kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C1YN72 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase
YP_003678732.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR000792:IPR001789:IPR011991:IPR011006:IPR 016032; KEGG: sro:Sros_1910 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YN71 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003678733.1	COGs: COG4339 conserved hypothetical protein; InterPro IPR009218; KEGG: tfu:Tfu_0918 hypothetical protein; SPTR: C1YN70 Uncharacterized conserved protein
YP_003678734.1	KEGG: tfu:Tfu_0919 hypothetical protein; SPTR: C1YN69  uncharacterized protein
YP_003678735.1	COGs: COG1522 transcriptional regulators; InterProIPR019885:IPR019887:IPR019888:IPR000485:IPR 011991:IPR011008; KEGG: tfu:Tfu_0920 AsnC family transcriptional regulator; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type; SPTR: C1YN68 transcriptional regulator, AsnC family; PFAM: AsnC family
YP_003678736.1	COGs: COG3483 tryptophan 2 3-dioxygenase (vermilion); InterPro IPR004981; KEGG: tfu:Tfu_0921 tryptophan 2,3-dioxygenase; PFAM: tryptophan 23-dioxygenase; SPTR: C1YN67 tryptophan 2,3-dioxygenase (Vermilion); PFAM: tryptophan 2,3-dioxygenase; TIGRFAM: tryptophan 2,3-dioxygenase
YP_003678737.1	COGs: COG3844 Kynureninase; InterPro IPR015424:IPR010111:IPR000192:IPR015421; KEGG: tfu:Tfu_0922 kynureninase; PFAM: aminotransferase class V; SPTR: C1YN66 Kynureninase; TIGRFAM: kynureninase; PFAM: aminotransferase class-V; TIGRFAM: kynureninase
YP_003678738.1	KEGG: tfu:Tfu_0923 hypothetical protein; SPTR: C1YN65  uncharacterized protein
YP_003678739.1	COGs: COG1522 transcriptional regulators; InterProIPR019888:IPR019887:IPR000485:IPR011991:IPR 011008; KEGG: sen:SACE_3951 AsnC family transcriptional regulator; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type; SPTR: C1YV22 AsnC family transcriptional regulator; PFAM: Sugar-specific transcriptional regulator TrmB; AsnC family
YP_003678740.1	COGs: COG0384 epimerase PhzC/PhzF homolog; InterPro IPR003719; KEGG: tfu:Tfu_0096 phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein; SPTR: C1YV21 Phenazine biosynthesis protein PhzF family; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family
YP_003678741.1	COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR016039:IPR014031:IPR016038:IPR014030; KEGG: aac:Aaci_1346 3-oxoacyl-(acyl-carrier-protein) synthase 2; PFAM: beta-ketoacyl synthase; SPTR: C1YV20 3-oxoacyl-(acyl-carrier-protein) synthase; PFAM: beta-ketoacyl synthase, N-terminal domain; beta-ketoacyl synthase, C-terminal domain
YP_003678742.1	KEGG: eel:EUBELI_20400 hypothetical protein; SPTR: C1YV19  uncharacterized protein
YP_003678743.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: cbe:Cbei_0262 ABC transporter related; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YV18 ABC-type antimicrobial peptide transporter ATPase component; PFAM: ABC transporter
YP_003678744.1	InterPro IPR013217; KEGG: mpl:Mpal_0717 methyltransferase type 12; PFAM: methyltransferase type 12; SPTR: C1YV17 methyltransferase family protein; PFAM: methyltransferase domain
YP_003678745.1	COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterProIPR015424:IPR004839:IPR009081:IPR006162:IPR 015421; KEGG: rba:RB386 saframycin Mx1 synthetase B; PFAM: aminotransferase class I and II; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: C1YV16 7-keto-8-aminopelargonate synthetase-like enzyme; PFAM: phosphopantetheine attachment site; aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase
YP_003678746.1	COGs: COG1819 glycosyl transferase related to UDP-glucuronosyltransferase; InterPro IPR002213; KEGG: rmu:RMDY18_19700 glycosyl transferase; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; SPTR: C1YV14  uncharacterized protein; PFAM: UDP-glucoronosyl and UDP-glucosyl transferase
YP_003678747.1	COGs: COG3044 ATPase of the ABC class; InterPro IPR019195; KEGG: tfu:Tfu_0925 hypothetical protein; PFAM: ABC transporter ATPase; SPTR: C1YV13 Predicted ATPase of the ABC class; PFAM: Predicted ATPase of the ABC class
YP_003678748.1	InterPro IPR002766:IPR008492; KEGG: tfu:Tfu_0926 hypothetical protein; PFAM: protein of unknown function DUF75; SPTR: C1YV12  uncharacterized protein; PFAM: PAC2 family
YP_003678749.1	COGs: COG0167 dihydroorotate dehydrogenase; InterPro IPR012135:IPR001295:IPR013785:IPR005719; KEGG: tfu:Tfu_0927 dihydroorotate dehydrogenase 2; PFAM: dihydroorotate oxidase; PRIAM: dihydroorotate oxidase; SPTR: C1YV11 dihydroorotate oxidase A; TIGRFAM: dihydroorotate dehydrogenase; PFAM: dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2
YP_003678750.1	COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509:IPR011330; KEGG: sro:Sros_0662 xylanase/chitin deacetylase-like protein; PFAM: polysaccharide deacetylase; SPTR: C1YV10 Predicted xylanase/chitin deacetylase; PFAM: polysaccharide deacetylase
YP_003678751.1	COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509:IPR011330; KEGG: sro:Sros_0662 xylanase/chitin deacetylase-like protein; PFAM: polysaccharide deacetylase; SPTR: C1YV09 Predicted xylanase/chitin deacetylase; PFAM: polysaccharide deacetylase
YP_003678752.1	COGs: COG0620 methionine synthase II (cobalamin-independent); InterPro IPR013215:IPR002629:IPR006276; KEGG: sro:Sros_7219 5-methyltetrahydropteroyltriglutamate--homocyste IneS-methyltransferase; PFAM: methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein; PRIAM:5-methyltetrahydropteroyltriglutamate--homocy steineS-methyltransferase; SPTR: C1YV08 methionine synthase (B12-independent); TIGRFAM:5-methyltetrahydropteroyltriglutamate/homoc ysteineS-methyltransferase; PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
YP_003678753.1	KEGG: tfu:Tfu_0929 hypothetical protein; SPTR: C1YV07  uncharacterized protein
YP_003678754.1	KEGG: tfu:Tfu_0930 hypothetical protein; SPTR: C1YV06  uncharacterized protein
YP_003678755.1	COGs: COG1135 ABC-type metal ion transporter ATPase component; InterProIPR017871:IPR003439:IPR018449:IPR003593:IPR 017908; KEGG: tfu:Tfu_0931 ABC-type metal ion transporter ATPase component; PFAM: ABC transporter related; NIL domain; SMART: ATPase AAA; SPTR: C1YV05 ABC-type metal ion transporter ATPase component; PFAM: ABC transporter; NIL domain
YP_003678756.1	COGs: COG2011 ABC-type metal ion transporter permease; InterPro IPR000515; KEGG: tfu:Tfu_0932  ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YV04 ABC-type metal ion transport system, permease; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678757.1	COGs: COG1464 ABC-type metal ion transporter periplasmic component/surface antigen; InterPro IPR017909:IPR004872; KEGG: tfu:Tfu_0933 ABC transporter substrate-binding protein; PFAM: NLPA lipoprotein; SPTR: C1YV03 ABC-type metal ion transporter periplasmic component/surface antigen; PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family
YP_003678758.1	COGs: COG2723 beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; InterProIPR018120:IPR001360:IPR017736:IPR013781:IPR 017853; KEGG: tfu:Tfu_0937 beta-galactosidase; PFAM: glycoside hydrolase family 1; PRIAM: beta-glucosidase; SPTR: C1YV02 Broad-specificity cellobiase; TIGRFAM: beta-galactosidase; PFAM: glycosyl hydrolase family 1; TIGRFAM: beta-galactosidase
YP_003678759.1	COGs: COG1609 transcriptional regulators; InterPro IPR000843:IPR001761:IPR010982; KEGG: tfu:Tfu_0938 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: C1YV01 LacI family transcriptional regulator; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003678760.1	KEGG: cur:cur_1811 molecular chaperone protein; SPTR: B1VHX0 Chaperone protein dnaJ
YP_003678761.1	KEGG: tfu:Tfu_0939 hypothetical protein; SPTR: C1YV00  uncharacterized protein
YP_003678762.1	InterPro IPR003709; KEGG: kra:Krad_1895 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin; PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; SPTR: C1YUZ9 D-alanyl-D-alanine carboxypeptidase; PFAM: D-alanyl-D-alanine carboxypeptidase
YP_003678763.1	COGs: COG0642 Signal transduction histidine kinase; InterPro IPR013587:IPR003660:IPR003594:IPR005467; KEGG: tfu:Tfu_0940 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; nitrate and nitrite sensing domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SPTR: C1YUZ8 Signal transduction histidine kinase, COG0642; PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; nitrate and nitrite sensing
YP_003678764.1	COGs: COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid; InterPro IPR004942; KEGG: tfu:Tfu_0941 hypothetical protein; PFAM: Roadblock/LC7 family protein; SPTR: C1YUZ7 Uncharacterized conserved protein; PFAM: Roadblock/LC7 domain
YP_003678765.1	InterPro IPR007995; KEGG: tfu:Tfu_0942 hypothetical protein; PFAM: protein of unknown function DUF742; SPTR: Q47RD7  uncharacterized protein; PFAM: protein of unknown function (DUF742)
YP_003678766.1	COGs: COG2229 GTPase; InterPro IPR004130; KEGG: tfu:Tfu_0943  ATP/GTP-binding protein; PFAM: protein of unknown function ATP binding; SPTR: C1YUZ5 Predicted GTPase, COG2229; PFAM: Conserved hypothetical ATP binding protein
YP_003678767.1	COGs: COG4805 conserved hypothetical protein; InterPro IPR010281; KEGG: tfu:Tfu_2107 hypothetical protein; PFAM: protein of unknown function DUF885; SPTR: C1YUZ4 Uncharacterized conserved protein; PFAM: Bacterial protein of unknown function (DUF885)
YP_003678768.1	COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310:IPR011151:IPR011146; KEGG: tfu:Tfu_2105 hypothetical protein; PFAM: histidine triad (HIT) protein; SPTR: C1YUZ3 HIT family hydrolase, diadenosine tetraphosphate hydrolase; PFAM: HIT domain
YP_003678769.1	COGs: COG0558 phosphatidylglycerophosphate synthase; InterPro IPR000462; KEGG: tfu:Tfu_2103  membrane transferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: C1YUZ2 CDP-diacylglycerol inositol 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_003678770.1	COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: tfu:Tfu_2102 lipid A biosynthesis lauroyl acyltransferase; PFAM: lipid A biosynthesis acyltransferase; SPTR: C1YV26 Lauroyl/myristoyl acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase
YP_003678771.1	COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: tfu:Tfu_2101 phosphatidylinositol alpha-mannosyltransferase; PFAM: glycosyl transferase group 1; PRIAM: phosphatidylinositol alpha-mannosyltransferase; SPTR: C1YV25 phosphatidylinositol alpha-mannosyltransferase; PFAM: glycosyl transferases group 1
YP_003678772.1	KEGG: tcu:Tcur_2103 hypothetical protein; SPTR: C1YV24  uncharacterized protein
YP_003678773.1	COGs: COG0214 pyridoxine biosynthesis enzyme; InterPro IPR001852:IPR011060; KEGG: tfu:Tfu_2099 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein; SPTR: C1YV23 pyridoxal phosphate synthase yaaD subunit; TIGRFAM: pyridoxine biosynthesis protein; PFAM: SOR/SNZ family; TIGRFAM: pyridoxine biosynthesis protein
YP_003678774.1	COGs: COG0311 glutamine amidotransferase involved in pyridoxine biosynthesis; InterPro IPR002161; KEGG: tfu:Tfu_2097 glutamine amidotransferase subunit PdxT; PFAM: SNO glutamine amidotransferase; SPTR: C1YQS5 pyridoxal phosphate synthase yaaE subunit; PFAM: SNO glutamine amidotransferase family
YP_003678775.1	COGs: COG0217 conserved hypothetical protein; InterPro IPR017856:IPR002876; KEGG: tfu:Tfu_2096 hypothetical protein; PFAM: protein of unknown function DUF28; SPTR: C1YQS4  uncharacterized protein; PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033
YP_003678776.1	InterPro IPR000073; KEGG: sro:Sros_4695 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: C1YQS3 Predicted hydrolase or acyltransferase of alpha/beta superfamily
YP_003678777.1	COGs: COG0665 glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: svi:Svir_23290 glycine/D-amino acid oxidase deaminating; PFAM: FAD dependent oxidoreductase; PRIAM: D-amino-acid dehydrogenase; SPTR: C1YQS2 glycine/D-amino acid oxidase deaminating; PFAM: FAD dependent oxidoreductase
YP_003678778.1	COGs: COG0473 isocitrate/isopropylmalate dehydrogenase; InterPro IPR011829:IPR019818:IPR001804; KEGG: mjl:Mjls_2612 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: Tartrate decarboxylase; SPTR: C1YQS1 Tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; TIGRFAM: tartrate dehydrogenase
YP_003678779.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639:IPR000073; KEGG: cag:Cagg_2835 alpha/beta hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YQS0 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003678780.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: sen:SACE_4609 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: C1YQR9 transcriptional regulator, COG0583; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_003678781.1	InterPro IPR011576:IPR019920:IPR009002; KEGG: mpa:MAP2229 hypothetical protein; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: C1YQR7 Predicted flavin-nucleotide-binding protein; TIGRFAM:  F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme
YP_003678782.1	KEGG: tcu:Tcur_1938 hypothetical protein; SPTR: C1YQR6  uncharacterized protein
YP_003678783.1	COGs: COG0104 adenylosuccinate synthase; InterPro IPR001114; KEGG: sro:Sros_8967 adenylosuccinate synthase; PFAM: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase; SPTR: C1YQR5 adenylosuccinate synthase; PFAM: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase
YP_003678784.1	KEGG: sro:Sros_8966 hypothetical protein; SPTR: C1YQR4  uncharacterized protein
YP_003678785.1	InterPro IPR011009; KEGG: sro:Sros_8963 hypothetical protein; SPTR: C1YQR3  uncharacterized protein
YP_003678786.1	COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086:IPR015797; KEGG: tcu:Tcur_3138 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: C1YQR2 ADP-ribose pyrophosphatase; PFAM: NUDIX domain
YP_003678787.1	COGs: COG0817 Holliday junction resolvasome endonuclease subunit; InterPro IPR020563:IPR002176:IPR012337; KEGG: tfu:Tfu_2095 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC; PRIAM: Crossover junction endodeoxyribonuclease; SPTR: C1YQR1 Holliday junction endonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC
YP_003678788.1	COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; InterProIPR003583:IPR010994:IPR011114:IPR013849:IPR 012340:IPR016027:IPR000085; KEGG: tfu:Tfu_2094 Holliday junction DNA helicase subunit RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; SPTR: C1YQR0 Holliday junction DNA helicase subunit RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, Ruvsubunit alpha
YP_003678789.1	COGs: COG2255 Holliday junction resolvasome helicase subunit; InterProIPR008824:IPR003959:IPR008823:IPR004605:IPR 003593:IPR011991; KEGG: tfu:Tfu_2093 Holliday junction DNA helicase RuvB; PFAM: ATPase AAA; Holliday junction DNA helicase RuvB domain; SMART: ATPase AAA; SPTR: C1YQQ9 Holliday junction DNA helicase subunit RuvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, Ruvsubunit beta
YP_003678790.1	COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: tfu:Tfu_2092 protein translocase subunit YajC; PFAM: YajC family protein; SPTR: C1YQQ8 Preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit
YP_003678791.1	COGs: COG0503 adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; InterPro IPR000836:IPR005764; KEGG: tfu:Tfu_2091 adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: C1YQQ7 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase
YP_003678792.1	COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterProIPR006674:IPR007685:IPR004095:IPR002912:IPR 004811:IPR003607:IPR012675:IPR012676; KEGG: tfu:Tfu_2090 RelA/SpoT protein; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain protein; amino acid-binding ACT domain protein; PRIAM: GTP diphosphokinase; SMART: metal-dependent phosphohydrolase HD region; SPTR: C1YQQ6 (P)ppGpp synthetase, RelA/SpoT family; TIGRFAM: RelA/SpoT family protein; PFAM: HD domain; ACT domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family
YP_003678793.1	KEGG: tfu:Tfu_1067 hypothetical protein; SPTR: C1YQQ5  uncharacterized protein; PFAM: Domain of unknown function (DUF385); TIGRFAM: conserved hypothetical protein TIGR00026
YP_003678794.1	COGs: COG1960 acyl-CoA dehydrogenase; InterProIPR013786:IPR006091:IPR006090:IPR009100:IPR 013764:IPR006092:IPR009075:IPR006089; KEGG: tfu:Tfu_1068 glutaryl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: C1YQQ4 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain
YP_003678795.1	COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: tfu:Tfu_1069 CaiB/BaiF family protein; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: C1YQQ3 Predicted acyl-CoA transferase/carnitine dehydratase; PFAM: CoA-transferase family III
YP_003678796.1	KEGG: tfu:Tfu_1070 hypothetical protein; SPTR: C1YQQ2  uncharacterized protein
YP_003678797.1	COGs: COG0520 Selenocysteine lyase; InterPro IPR015424:IPR000192:IPR015421; KEGG: sen:SACE_5825 cysteine desulfurase; PFAM: aminotransferase class V; SPTR: C1YQQ1 Selenocysteine lyase; PFAM: aminotransferase class-V
YP_003678798.1	InterPro IPR002328; KEGG: dac:Daci_5460 import inner membrane translocase subunit Tim44; SPTR: C1YQQ0  uncharacterized protein
YP_003678799.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: sro:Sros_0270 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C4E2R3 ABC-type antimicrobial peptide transporter ATPase component; PFAM: ABC transporter
YP_003678800.1	InterPro IPR001969:IPR003838; KEGG: sco:SCO3753 integral membrane; PFAM: protein of unknown function DUF214; SPTR: C1YQP7 ABC-type antimicrobial peptide transporter permease; PFAM: Predicted permease
YP_003678801.1	InterPro IPR006764; KEGG: tfu:Tfu_1071 hypothetical protein; PFAM: protein of unknown function DUF574; SPTR: C1YQP6  uncharacterized protein; PFAM: protein of unknown function (DUF574)
YP_003678802.1	KEGG: sen:SACE_4220 hypothetical protein; SPTR: C1YQP5  uncharacterized protein
YP_003678803.1	COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; KEGG: tfu:Tfu_1073 primosome assembly protein PriA; SPTR: C1YQP4 Primosomal protein N' (Replication factor Y)-superfamily II helicase; TIGRFAM: primosomal protein N'
YP_003678804.1	COGs: COG0223 Methionyl-tRNA formyltransferase; InterPro IPR002376:IPR005793:IPR005794:IPR011034; KEGG: sro:Sros_2825 methionyl-tRNA formyltransferase; PFAM: formyl transferase; SPTR: C1YQP3 Methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase
YP_003678805.1	COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR018314:IPR006027:IPR001678; KEGG: tfu:Tfu_1076  RNA-binding Sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; SPTR: C1YQP2 tRNA/rRNA cytosine-C5-methylase; PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB
YP_003678806.1	KEGG: fre:Franean1_2783 hypothetical protein; SPTR: C1YQP1  uncharacterized protein
YP_003678807.1	KEGG: rci:RRC34 hypothetical protein; SPTR: C1YQP0  uncharacterized protein
YP_003678808.1	COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056:IPR013785:IPR011060; KEGG: sro:Sros_2830 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: ribulose-phosphate 3-epimerase; SPTR: C1YQN9 ribulose-5-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase
YP_003678809.1	InterPro IPR000326:IPR016118; KEGG: tcu:Tcur_2998 phosphoesterase PA-phosphatase related protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; SPTR: C1YQN8 PAP2 superfamily protein; PFAM: PAP2 superfamily
YP_003678810.1	COGs: COG0307 riboflavin synthase alpha chain; InterPro IPR001783:IPR017938; KEGG: kra:Krad_2979 riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; PRIAM: riboflavin synthase; SPTR: C1YQN7 riboflavin synthase, subunit alpha; TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit
YP_003678811.1	COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; InterPro IPR000422:IPR000926:IPR017945:IPR016299; KEGG: tfu:Tfu_1080 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; SPTR: C1YQN6 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_003678812.1	COGs: COG0054 riboflavin synthase beta-chain; InterPro IPR002180; KEGG: tfu:Tfu_1081 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; PRIAM: riboflavin synthase; SPTR: C1YQN5 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_003678813.1	InterPro IPR019692; KEGG: tfu:Tfu_1082 hypothetical protein; PFAM: protein of unknown function DUF2581; SPTR: C1YQN4  uncharacterized protein; PFAM: protein of unknown function (DUF2581)
YP_003678814.1	COGs: COG1975 xanthine and CO dehydrogenase maturation factor XdhC/CoxF family; InterPro IPR003777; KEGG: sro:Sros_2845 xanthine dehydrogenase accessory factor, PFAM: protein of unknown function DUF182; SPTR: C1YQN3 xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; PFAM: XdhC and CoxI family
YP_003678815.1	COGs: COG2068 Uncharacterized MobA-related protein; InterPro IPR001228; KEGG: tcu:Tcur_2977 hypothetical protein; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; SPTR: C1YQN2 Uncharacterized MobA-like protein, COG2068; PFAM: Uncharacterized protein family UPF0007
YP_003678816.1	COGs: COG2017 Galactose mutarotase; InterPro IPR008183:IPR014718:IPR011013; KEGG: tfu:Tfu_1083  aldose-1-epimerase; PFAM: aldose 1-epimerase; SPTR: C1YQN1 Galactose mutarotase-like enzyme; PFAM: aldose 1-epimerase
YP_003678817.1	KEGG: sro:Sros_5653 hypothetical protein; SPTR: C1YQN0  uncharacterized protein
YP_003678818.1	COGs: COG3795 conserved hypothetical protein; InterPro IPR005545:IPR011008; KEGG: tcu:Tcur_0283 YCII-related protein; PFAM: YCII-related; SPTR: C1YQM9 Uncharacterized conserved protein; PFAM: YCII-related domain
YP_003678819.1	COGs: COG4941 RNA polymerase sigma factor containing a TPR repeat domain; InterProIPR007627:IPR013249:IPR004107:IPR014284:IPR 013325:IPR010998:IPR013324; KEGG: sro:Sros_4226 RNA polymerase sigma factor containing a TPR repeat domain-like protein; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; integrase domain protein SAM domain protein; SPTR: C1YQM8 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Phage integrase, N-terminal SAM-like domain; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003678820.1	COGs: COG0515 serine/threonine protein kinase; InterPro IPR011009:IPR017442:IPR000719; KEGG: tfu:Tfu_1084 serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SPTR: C1YQM7 protein kinase family protein; PFAM: protein kinase domain
YP_003678821.1	InterPro IPR019595; KEGG: tfu:Tfu_1085 hypothetical protein; PFAM: protein of unknown function DUF2470; SPTR: C1YQM6  heme iron utilization protein; PFAM: protein of unknown function (DUF2470)
YP_003678822.1	COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: tfu:Tfu_1086 hypothetical protein; PFAM: YceI family protein; SMART: YceI family protein; SPTR: C1YQM5 Uncharacterized conserved protein; PFAM: YceI-like domain
YP_003678823.1	InterPro IPR000835:IPR011991; KEGG: tfu:Tfu_1087 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YQM4 transcriptional regulator; PFAM: MarR family
YP_003678824.1	KEGG: tfu:Tfu_1088 hypothetical protein; SPTR: C1YQM3  uncharacterized protein
YP_003678825.1	COGs: COG1989 type II secretory pathway prepilin signal peptidase PulO and related peptidase; KEGG: tfu:Tfu_1089 hypothetical protein; SPTR: C1YQM2 prepilin signal peptidase PulO-like peptidase; PFAM: type IV leader peptidase family
YP_003678826.1	COGs: COG0082 chorismate synthase; InterPro IPR020541:IPR000453; KEGG: tfu:Tfu_1090 chorismate synthase; PFAM: chorismate synthase; PRIAM: chorismate synthase; SPTR: C1YQM1 chorismate synthase; TIGRFAM: chorismate synthase; PFAM: chorismate synthase; TIGRFAM: chorismate synthase
YP_003678827.1	COGs: COG0703 shikimate kinase; InterPro IPR000623; KEGG: tfu:Tfu_1091 shikimate kinase; PFAM: shikimate kinase; PRIAM: shikimate kinase; SPTR: C1YQM0 shikimate kinase; PFAM: shikimate kinase
YP_003678828.1	COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR002658:IPR016037:IPR016303; KEGG: tfu:Tfu_1092 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; PRIAM: 3-dehydroquinate synthase; SPTR: C1YQL9 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase
YP_003678829.1	COGs: COG0231 translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); InterProIPR013852:IPR013185:IPR001059:IPR015365:IPR 011768:IPR014722:IPR012340:IPR016027:IPR008991; KEGG: tfu:Tfu_1093 elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW domain protein; Elongation factor P/YeiP protein; SPTR: C1YQL8 Elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P
YP_003678830.1	COGs: COG0781 transcription termination factor; InterPro IPR011605:IPR006027; KEGG: tfu:Tfu_1094 transcription antitermination protein NusB; PFAM: NusB/RsmB/TIM44; SPTR: C1YQL7 transcription antitermination factor NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB
YP_003678831.1	InterPro IPR013216; KEGG: tfu:Tfu_1095  methyltransferase; PFAM: methyltransferase type 11; SPTR: C1YQL6 methyltransferase family protein; PFAM: methyltransferase domain
YP_003678832.1	COGs: COG0389 nucleotidyltransferase/DNA polymerase involved in DNA repair; InterPro IPR001126:IPR017963:IPR017961:IPR017962; KEGG: tfu:Tfu_1096 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein; PRIAM: DNA-directed DNA polymerase; SPTR: C1YQL5 nucleotidyltransferase/DNA polymerase involved in DNA repair; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family
YP_003678833.1	KEGG: tfu:Tfu_1097 hypothetical protein; SPTR: C1YQL4  uncharacterized protein; PFAM: protein of unknown function (DUF3040)
YP_003678834.1	COGs: COG1305 transglutaminase-like protein; InterPro IPR002931; KEGG: tfu:Tfu_1098 transglutaminase-like; PFAM: transglutaminase domain protein; SMART: transglutaminase; SPTR: C1YQL3 transglutaminase-like enzyme, predicted cysteine protease; PFAM: transglutaminase-like superfamily
YP_003678835.1	COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: tcu:Tcur_2937 protein of unknown function DUF58; PFAM: protein of unknown function DUF58; SPTR: C1YQL2 Uncharacterized conserved protein; PFAM: protein of unknown function DUF58
YP_003678836.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR011703:IPR016366; KEGG: tcu:Tcur_2936 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: C1YQL1 MoxR-like ATPase; PFAM: ATPase family associated with various cellular activities (AAA)
YP_003678837.1	COGs: COG2001 conserved hypothetical protein; InterPro IPR020603:IPR003444; KEGG: tfu:Tfu_1101 cell division protein MraZ; PFAM: MraZ domain; SPTR: C1YQL0 MraZ protein; TIGRFAM: MraZ protein; PFAM: MraZ protein; TIGRFAM: mraZ protein
YP_003678838.1	COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; InterPro IPR002903; KEGG: tfu:Tfu_1102 methyltransferase; PFAM: methyltransferase; SPTR: C1YQK9 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW
YP_003678839.1	KEGG: tfu:Tfu_1103 hypothetical protein; SPTR: C1YQK8  uncharacterized protein
YP_003678840.1	COGs: COG0768 cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311:IPR001460:IPR012338; KEGG: tfu:Tfu_1104 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: peptidoglycan glycosyltransferase; SPTR: C1YQK7 cell division protein FtsI/penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding protein dimerisation domain
YP_003678841.1	COGs: COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent); InterPro IPR003726; KEGG: sro:Sros_2740 homocysteine methyltransferase; PFAM: homocysteine S-methyltransferase; SPTR: C1YQK6 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent); PFAM: Homocysteine S-methyltransferase
YP_003678842.1	COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterPro IPR000713:IPR013221:IPR004101:IPR005761; KEGG: tfu:Tfu_1105 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: C1YQK5 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetases
YP_003678843.1	COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterProIPR006118:IPR000713:IPR013221:IPR004101:IPR 005863; KEGG: tfu:Tfu_1106 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: C1YQK4 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-d iaminopimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
YP_003678844.1	COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018480:IPR018481:IPR003524; KEGG: tfu:Tfu_1107 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: glycosyl transferase, family 4, conserved region; phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; PRIAM:phospho-N-acetylmuramoyl-pentapeptide-transfe rase; SPTR: C1YQK3 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide-trans ferase; PFAM: glycosyl transferase family 4; phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase
YP_003678845.1	COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; InterPro IPR013221:IPR004101:IPR005762:IPR016040; KEGG: tfu:Tfu_1108 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: C1YQK2 UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase
YP_003678846.1	COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR018365:IPR001182:IPR013437; KEGG: tfu:Tfu_1109 cell division protein FtsW; PFAM: cell cycle protein; SPTR: C1YQK1 cell division-specific peptidoglycan biosynthesis regulator FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; TIGRFAM: cell division protein FtsW
YP_003678847.1	COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; InterPro IPR004276:IPR007235:IPR006009; KEGG: tfu:Tfu_1110 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: glycosyl transferase family 28; glycosyltransferase 28 domain; PRIAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; SPTR: C1YQK0 UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyltransferase family 28 N-terminal domain; glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
YP_003678848.1	COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; InterProIPR016040:IPR013221:IPR005758:IPR004101:IPR 000713; KEGG: tfu:Tfu_1111 UDP-N-acetylmuramate--L-alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: C1YQJ9 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase
YP_003678849.1	COGs: COG1589 cell division septal protein; InterPro IPR013685:IPR005548; KEGG: tfu:Tfu_1112 cell division protein FtsQ; PFAM: polypeptide-transport-associated domain protein FtsQ-type; cell division protein FtsQ; SPTR: C1YQJ8 cell division septal protein; PFAM: cell division protein FtsQ; POTRA domain, FtsQ-type
YP_003678850.1	COGs: COG0206 cell division GTPase; InterProIPR020805:IPR003008:IPR018316:IPR000158:IPR 019746:IPR008280; KEGG: tfu:Tfu_1113 cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; SPTR: C1YQJ7 cell division protein ftsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ
YP_003678851.1	COGs: COG1496 conserved hypothetical protein; InterPro IPR003730:IPR011324; KEGG: tfu:Tfu_1114 hypothetical protein; PFAM: protein of unknown function DUF152; SPTR: C1YQJ6  uncharacterized protein; PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: conserved hypothetical protein TIGR00726
YP_003678852.1	COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078:IPR001608; KEGG: tfu:Tfu_1115 hypothetical protein; PFAM: alanine racemase; SPTR: C1YQJ5 pyridoxal phosphate enzyme, YggS family; PFAM: alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family
YP_003678853.1	COGs: COG1799 conserved hypothetical protein; InterPro IPR007561; KEGG: tfu:Tfu_1116 hypothetical protein; PFAM: protein of unknown function DUF552; SPTR: C1YQJ4 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF552)
YP_003678854.1	InterPro IPR003425; KEGG: tcu:Tcur_2920 protein of unknown function YGGT; PFAM: protein of unknown function YGGT; SPTR: C1YQJ3 YGGT family protein; PFAM: YGGT family
YP_003678855.1	InterPro IPR019933:IPR007793; KEGG: tfu:Tfu_1118 hypothetical protein; PFAM: DivIVA family protein; SPTR: C1YQJ2 cell division initiation protein; TIGRFAM: DivIVA domain; PFAM: DivIVA protein; TIGRFAM: DivIVA domain
YP_003678856.1	COGs: COG5271 ATPase AAA containing von Willebrand factor type A (vWA) domain; KEGG: hypothetical protein; SPTR: C1YQJ1  uncharacterized protein
YP_003678857.1	COGs: COG0060 isoleucyl-tRNA synthetase; InterProIPR002300:IPR013155:IPR002301:IPR015905:IPR 014729:IPR009008:IPR009080; KEGG: tfu:Tfu_1120 isoleucyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; SPTR: C1YQJ0 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase
YP_003678858.1	KEGG: tfu:Tfu_1121 hypothetical protein; SPTR: C1YQI9  uncharacterized protein
YP_003678859.1	InterPro IPR000182:IPR016181; KEGG: fre:Franean1_4132 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YQI8 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003678860.1	COGs: COG1734 DnaK suppressor protein; InterPro IPR000962; KEGG: sma:SAV_6131 DNA-binding protein; PFAM: zinc finger DksA/TraR C4-type; SPTR: C1YQI7 DnaK suppressor protein; PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA
YP_003678861.1	COGs: COG0597 Lipoprotein signal peptidase; InterPro IPR001872; KEGG: nfa:nfa17880 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; SPTR: C1YQI6 Lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase
YP_003678862.1	COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterProIPR006225:IPR002942:IPR006145:IPR020103:IPR 006224; KEGG: tfu:Tfu_1123 ribosomal large subunit pseudouridine synthase D; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: C1YQI5 Pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase
YP_003678863.1	COGs: COG0697 Permease of the drug/metabolite transporter (DMT) superfamily; InterPro IPR000620; KEGG: sco:SCO1359 integral membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C1YQI4 DMT(Drug/metabolite transporter) superfamily permease; PFAM: EamA-like transporter family
YP_003678864.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: sro:Sros_4400 transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: C1YQI3 transcriptional regulator, COG0583; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; TIGRFAM: ModE molybdate transport repressor domain
YP_003678865.1	COGs: COG0028 thiamine pyrophosphate-requiring protein; InterPro IPR011766:IPR012000:IPR000399:IPR012001; KEGG: rxy:Rxyl_2477 thiamine pyrophosphate enzyme-like TPP binding region; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; SPTR: C1YQI2 thiamine pyrophosphate-dependent enzyme, carboligase or decarboxylase; PFAM: thiamine pyrophosphate enzyme, central domain; thiamine pyrophosphate enzyme, N-terminal TPP binding domain; thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_003678866.1	InterPro IPR008407; KEGG: tfu:Tfu_1137 hypothetical protein; PFAM: branched-chain amino acid transport; SPTR: C1YQI1 Branched-chain amino acid transporter (AzlD); PFAM: Branched-chain amino acid transport protein (AzlD)
YP_003678867.1	COGs: COG1296 branched-chain amino acid permease (azaleucine resistance); InterPro IPR011606; KEGG: tfu:Tfu_1138 hypothetical protein; PFAM: AzlC family protein; SPTR: C1YQI0 Predicted branched-chain amino acid permease (Azaleucine resistance); PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC
YP_003678868.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR000005:IPR012287:IPR018060:IPR003313:IPR 009057; KEGG: sro:Sros_2887 AraC family transcriptional regulator; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C1YQH9 DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_003678869.1	COGs: COG2153 acyltransferase; InterPro IPR000182:IPR016181; KEGG: sco:SCO2072 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YQH8 Predicted acyltransferase, COG2153; PFAM: acetyltransferase (GNAT) family
YP_003678870.1	InterPro IPR006683; KEGG: tfu:Tfu_1139 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: C1YQH7 thioesterase superfamily enzyme; PFAM: thioesterase
YP_003678871.1	InterPro IPR020822:IPR002701; KEGG: tcu:Tcur_2907 chorismate mutase; PFAM: chorismate mutase, type II; SPTR: C1YQH6 chorismate mutase type II; PFAM: chorismate mutase type II
YP_003678872.1	InterPro IPR005135; KEGG: cyt:cce_3495 phytase; PFAM: endonuclease/exonuclease/phosphatase; SPTR: C1YQH5 endonuclease/exonuclease/phosphatase family protein; PFAM: endonuclease/exonuclease/phosphatase family
YP_003678873.1	InterProIPR001919:IPR013517:IPR008965:IPR017909:IPR 012291; KEGG: ami:Amir_1868 cellulose-binding family II; PFAM: cellulose-binding family II; FG-GAP repeat protein; SMART: cellulose-binding family II; SPTR: C1YQH4 cellulose binding protein with FG-GAP repeat; PFAM: cellulose binding domain
YP_003678874.1	COGs: COG0174 glutamine synthetase; InterPro IPR004809:IPR008147:IPR008146:IPR014746; KEGG: tfu:Tfu_0982 L-glutamine synthetase; PFAM: glutamine synthetase; glutamine synthetase beta-Grasp; SPTR: C1YQH3 L-glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic domain; glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase
YP_003678875.1	COGs: COG0171 NAD synthase; InterPro IPR003694:IPR014445:IPR003010:IPR014729; KEGG: tfu:Tfu_0983 NH(3)-dependent NAD(+) synthetase; PFAM: NAD synthase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PRIAM: NAD(+) synthase (glutamine-hydrolyzing); SPTR: C1YQH2 NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase
YP_003678876.1	COGs: COG3899 ATPase; InterProIPR000792:IPR011717:IPR016032:IPR011990:IPR 011991; KEGG: tcu:Tcur_0848 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; hypothetical protein; SMART: regulatory protein LuxR; SPTR: C1YQH0  uncharacterized protein; PFAM: Bacterial regulatory proteins, luxR family
YP_003678877.1	KEGG: sco:SCO4625 hypothetical protein; SPTR: C1YQG9  uncharacterized protein
YP_003678878.1	KEGG: tfu:Tfu_0364 hypothetical protein; SPTR: C1YQG8  uncharacterized protein
YP_003678879.1	KEGG: tfu:Tfu_0984 hypothetical protein; SPTR: C1YQG7  uncharacterized protein
YP_003678880.1	COGs: COG0366 glycosidase; InterProIPR002044:IPR013783:IPR013784:IPR013781:IPR 006589:IPR013780:IPR006047:IPR006048:IPR017853:IPR006046; KEGG: tfu:Tfu_0985 alpha amylase domain-containing protein; PFAM: alpha amylase catalytic region; glycoside hydrolase starch-binding; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; alpha amylase all-beta; SPTR: C1YQG6 glycosidase; PFAM: Starch binding domain; alpha amylase, C-terminal all-beta domain; alpha amylase, catalytic domain
YP_003678881.1	COGs: COG1391 glutamine synthetase adenylyltransferase; InterPro IPR005190:IPR013546; KEGG: tfu:Tfu_0986 glutamate-ammonia-ligase adenylyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; PRIAM: [glutamate--ammonia-ligase] adenylyltransferase; SPTR: C1YQG5 glutamine synthetase adenylyltransferase; PFAM: GlnD PII-uridylyltransferase; glutamate-ammonia ligase adenylyltransferase
YP_003678882.1	COGs: COG0174 glutamine synthetase; InterProIPR004809:IPR008147:IPR008146:IPR014746:IPR 001637; KEGG: tfu:Tfu_0988 L-glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: C1YQG4 glutamine synthetase; TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase, catalytic domain; glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I
YP_003678883.1	InterPro IPR010432; KEGG: sro:Sros_2630 hypothetical protein; PFAM: RDD domain containing protein; SPTR: C1YQG3 Uncharacterized conserved protein; PFAM: RDD family
YP_003678884.1	COGs: COG1316 transcriptional regulator; InterPro IPR004474:IPR017871:IPR008263; KEGG: tfu:Tfu_2526 cell envelope-related transcriptional attenuator; PFAM: cell envelope-related transcriptional attenuator; SPTR: C1YQG2 cell envelope-related function transcriptional attenuator common domain; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain
YP_003678885.1	COGs: COG1316 transcriptional regulator; InterPro IPR004474; KEGG: tfu:Tfu_2526 cell envelope-related transcriptional attenuator; PFAM: cell envelope-related transcriptional attenuator; SPTR: C1YQG1 cell envelope-related function transcriptional attenuator common domain; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain
YP_003678886.1	KEGG: kra:Krad_2889 hypothetical protein; SPTR: C1YQG0  uncharacterized protein; PFAM: protein of unknown function (DUF2975)
YP_003678887.1	COGs: COG3655 transcriptional regulator protein; InterPro IPR001387:IPR010982; KEGG: cai:Caci_8816 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YQF9 Predicted transcriptional regulator, COG3655; PFAM: Helix-turn-helix
YP_003678888.1	KEGG: tfu:Tfu_0990  integral membrane protein; SPTR: C1YQF8  uncharacterized protein
YP_003678889.1	COGs: COG0320 Lipoate synthase; InterPro IPR003698:IPR006638:IPR007197:IPR013785; KEGG: tfu:Tfu_0991 lipoyl synthase; PFAM: radical SAM protein; PRIAM: Lipoyl synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: C1YQF7 Lipoate synthase; TIGRFAM: lipoic acid synthetase; PFAM: radical SAM superfamily; TIGRFAM: lipoate synthase
YP_003678890.1	COGs: COG0321 Lipoate-protein ligase B; InterPro IPR000544:IPR004143; KEGG: tfu:Tfu_0992 lipoyltransferase; PFAM: biotin/lipoate A/B protein ligase; PRIAM: Lipoyl(octanoyl) transferase; SPTR: C1YQF6 Lipoate-protein ligase B; TIGRFAM: lipoate-protein ligase B; PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B
YP_003678891.1	COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR010099:IPR001509:IPR013549:IPR016040; KEGG: tcu:Tcur_3094 NAD-dependent epimerase/dehydratase; PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; SPTR: C1YQF5  uncharacterized protein; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777
YP_003678892.1	COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: sen:SACE_1538 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: C1YQF4 Predicted flavoprotein; PFAM: NADPH-dependent FMN reductase
YP_003678893.1	COGs: COG0508 pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterProIPR014276:IPR000089:IPR004167:IPR001078:IPR 011053:IPR003016; KEGG: tfu:Tfu_0993 2-oxoglutarate dehydrogenase E2 component; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; SPTR: C1YQF3 2-oxoglutarate dehydrogenase E2 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
YP_003678894.1	COGs: COG1249 pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR013027:IPR000815:IPR006258:IPR004099:IPR 016156:IPR012999; KEGG: tfu:Tfu_0994 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: C1YQF2 dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase
YP_003678895.1	COGs: COG0260 leucyl aminopeptidase; InterPro IPR000819:IPR008283; KEGG: tfu:Tfu_0995 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein; PRIAM: leucyl aminopeptidase; SPTR: C1YQF1 leucyl aminopeptidase; PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain
YP_003678896.1	COGs: COG0368 Cobalamin-5-phosphate synthase; InterPro IPR003805; KEGG: tfu:Tfu_0996 cobalamin-5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; SPTR: C1YQE9 Cobalamin-5'-phosphate synthase; PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase
YP_003678897.1	COGs: COG2087 adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; InterPro IPR003203; KEGG: tfu:Tfu_0997 adenosylcobinamide kinase; PFAM: cobalbumin biosynthesis protein; SPTR: C1YQE8 adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase
YP_003678898.1	KEGG: tfu:Tfu_0998 hypothetical protein; SPTR: C1YQE7  uncharacterized protein
YP_003678899.1	InterPro IPR012427; KEGG: tcu:Tcur_0408 protein of unknown function DUF1622; PFAM: protein of unknown function DUF1622; SPTR: C1YQE6 Predicted membrane protein, COG4828; PFAM: protein of unknown function (DUF1622)
YP_003678900.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: tfu:Tfu_1004 K+ channel beta subunit; PFAM: aldo/keto reductase; SPTR: C1YQE5 Predicted oxidoreductase similar to aryl-alcohol dehydrogenase; PFAM: Aldo/keto reductase family
YP_003678901.1	KEGG: tfu:Tfu_1005  integral membrane protein; SPTR: C1YQE4  uncharacterized protein; PFAM: protein of unknown function (DUF3043)
YP_003678902.1	COGs: COG1842 Phage shock protein A (IM30) suppresses sigma54-dependent transcription; InterPro IPR007157; KEGG: tfu:Tfu_1006 hypothetical protein; PFAM: PspA/IM30 family protein; SPTR: C1YQE3 Phage shock protein A (IM30), suppresses sigma54-dependent transcription; PFAM: PspA/IM30 family
YP_003678903.1	KEGG: tfu:Tfu_1007 hypothetical protein; SPTR: C1YQE2  uncharacterized protein
YP_003678904.1	COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: tfu:Tfu_1008 heat shock protein HtpX; PFAM: peptidase M48 Ste24p; SPTR: C1YQE1 heat shock protein; PFAM: peptidase family M48
YP_003678905.1	KEGG: sro:Sros_2659 hypothetical protein; SPTR: C1YQE0  uncharacterized protein
YP_003678906.1	COGs: COG1929 glycerate kinase; InterPro IPR004381:IPR018193; KEGG: tfu:Tfu_1010 glycerate kinase; PFAM: glycerate kinase; PRIAM: glycerate kinase; SPTR: C1YQD9 glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase family; TIGRFAM: glycerate kinase
YP_003678907.1	COGs: COG0683 ABC-type branched-chain amino acid transporters periplasmic component; InterPro IPR001828; KEGG: tfu:Tfu_1186 branched-chain amino acid transporter substrate-binding protein; PFAM: extracellular ligand-binding receptor; SPTR: C1YTV1 amino acid-binding protein; PFAM: Receptor family ligand binding region
YP_003678908.1	COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR003736:IPR006683; KEGG: tfu:Tfu_1188 phenylacetic acid degradation-related protein; PFAM: thioesterase superfamily protein; SPTR: C1YTV0 Uncharacterized conserved protein; PFAM: thioesterase; TIGRFAM: uncharacterized domain 1
YP_003678909.1	COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterProIPR002298:IPR018320:IPR002421:IPR008918:IPR 002562:IPR001098:IPR020046:IPR020047:IPR020045:IPR012337:I PR000408; KEGG: tfu:Tfu_1189 DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; PRIAM: DNA-directed DNA polymerase; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA-directed DNA polymerase; SPTR: C1YTU9 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: 3'-5' exonuclease; 5'-3' exonuclease, C-terminal SAM fold; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I
YP_003678910.1	COGs: COG1186 protein chain release factor B; InterPro IPR000352; KEGG: tcu:Tcur_0582 class I peptide chain release factor; PFAM: class I peptide chain release factor; SPTR: C1YTU8 protein chain release factor B; PFAM: RF-1 domain
YP_003678911.1	COGs: COG0539 ribosomal protein S1; InterPro IPR003029:IPR000110:IPR012340:IPR016027; KEGG: tfu:Tfu_1191 30S ribosomal protein S1; PFAM: RNA binding S1 domain protein; SPTR: C1YTU7 30S ribosomal protein S1P; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1
YP_003678912.1	InterPro IPR000182:IPR016181; KEGG: tcu:Tcur_2848 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YTU6 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003678913.1	COGs: COG0237 Dephospho-CoA kinase; InterPro IPR001977:IPR002345:IPR006061; KEGG: tfu:Tfu_1192 dephospho-CoA kinase; PRIAM: Dephospho-CoA kinase; SPTR: C1YTU5 Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase
YP_003678914.1	KEGG: tfu:Tfu_1269 hypothetical protein; SPTR: C1YTU4  uncharacterized protein
YP_003678915.1	COGs: COG0556 Helicase subunit of the DNA excision repair complex; InterProIPR004807:IPR014001:IPR001650:IPR001943:IPR 009055:IPR014021; KEGG: tfu:Tfu_1196 excinuclease ABC subunit B; PFAM: helicase domain protein; UvrB/UvrC protein; SMART: DEAD-like helicase ; helicase domain protein; SPTR: C1YTU3 UvrABC system protein B; TIGRFAM: excinuclease ABC, B subunit; PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; excinuclease ABC subunit B
YP_003678916.1	KEGG: tfu:Tfu_1197 hypothetical protein; SPTR: C1YTU2  uncharacterized protein; PFAM: protein of unknown function (DUF3060)
YP_003678917.1	InterPro IPR000182:IPR016181; KEGG: tfu:Tfu_1198 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YTU1 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003678918.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013785; KEGG: fre:Franean1_3719 pyruvate carboxyltransferase; PFAM: pyruvate carboxyltransferase; SPTR: C1YTU0 hydroxymethylglutaryl-CoA lyase; PFAM: HMGL-like
YP_003678919.1	COGs: COG0504 CTP synthase (UTP-ammonia lyase); InterPro IPR004468:IPR017456:IPR000991:IPR017926; KEGG: tfu:Tfu_1199 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; PRIAM: CTP synthase; SPTR: C1YTT9 CTP synthase; TIGRFAM: CTP synthase; PFAM: glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase
YP_003678920.1	InterPro IPR000086:IPR015797; KEGG: tfu:Tfu_1200 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: C1YTT8 NTP pyrophosphohydrolase; PFAM: NUDIX domain
YP_003678921.1	COGs: COG4974 Site-specific recombinase XerD; InterProIPR004107:IPR002104:IPR011010:IPR010998:IPR 013762; KEGG: tfu:Tfu_1201 site-specific tyrosine recombinase XerD; PFAM: integrase family protein; integrase; SPTR: C1YTT7 Site-specific recombinase XerD; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD
YP_003678922.1	COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: tfu:Tfu_1202  partitioning or sporulation protein; PFAM: cobyrinic acid ac-diamide synthase; SPTR: Q47QM9  partitioning or sporulation protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_003678923.1	KEGG: tfu:Tfu_1203 hypothetical protein; SPTR: C1YTT5  uncharacterized protein
YP_003678924.1	COGs: COG1354 conserved hypothetical protein; InterPro IPR003768; KEGG: tfu:Tfu_1204 condensin subunit ScpA; PFAM: chromosome segregation and condensation protein ScpA; SPTR: C1YTT4 Condensin subunit ScpA; PFAM: ScpA/B protein
YP_003678925.1	COGs: COG1386 transcriptional regulator protein containing the HTH domain; InterPro IPR005234:IPR011991; KEGG: tfu:Tfu_1205 condensin subunit ScpB; PFAM: chromosome segregation and condensation protein ScpB; SPTR: C1YTT3 Condensin subunit ScpB; TIGRFAM: segregation and condensation protein B; PFAM:  transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B
YP_003678926.1	COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterProIPR000748:IPR002942:IPR006145:IPR020103:IPR 018496; KEGG: sro:Sros_2996 pseudouridine synthase, Rsu; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: C1YTT2 Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase family
YP_003678927.1	COGs: COG4401 chorismate mutase; InterPro IPR008243:IPR013813; KEGG: tfu:Tfu_1207 chorismate mutase; PFAM: chorismate mutase of the AroH class; SPTR: C1YTT1 chorismate mutase; TIGRFAM: chorismate mutase; PFAM: chorismate mutase type I; TIGRFAM: monofunctional chorismate mutase, gram positive type, clade 1
YP_003678928.1	COGs: COG0287 prephenate dehydrogenase; InterPro IPR003099:IPR002912:IPR016040; KEGG: tfu:Tfu_1208 prephenate dehydrogenase; PFAM: prephenate dehydrogenase; amino acid-binding ACT domain protein; SPTR: C1YTT0 prephenate dehydrogenase; PFAM: prephenate dehydrogenase; ACT domain
YP_003678929.1	COGs: COG0283 Cytidylate kinase; InterPro IPR003136:IPR011994; KEGG: tfu:Tfu_1209 cytidylate kinase; PFAM: cytidylate kinase region; SPTR: C1YTS9 Cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase
YP_003678930.1	COGs: COG1160 GTPase; InterPro IPR016484:IPR002917:IPR005225:IPR006073; KEGG: tfu:Tfu_1210 GTP-binding protein EngA; PFAM: GTP-binding protein HSR1-related; SPTR: C1YTS8 GTP-binding protein engA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain
YP_003678931.1	KEGG: mgi:Mflv_5155 alpha/beta hydrolase fold; SPTR: C1YTS7 Predicted hydrolase or acyltransferase of alpha/beta superfamily
YP_003678932.1	InterPro IPR001647:IPR009057:IPR012287; KEGG: ami:Amir_5157 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YTS6 transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003678933.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR005828:IPR016196:IPR005829; KEGG: sma:SAV_5839 integral membrane transport protein; PFAM: general substrate transporter; SPTR: C1YTS5 Arabinose efflux permease family protein; PFAM: Sugar (and other) transporter
YP_003678934.1	COGs: COG2311 membrane protein; InterPro IPR007299:IPR007349; KEGG: sro:Sros_0035 hypothetical protein; PFAM: protein of unknown function DUF418; protein of unknown function DUF405; SPTR: C1YTS4 Predicted membrane protein, COG2311; PFAM: protein of unknown function (DUF418)
YP_003678935.1	InterPro IPR006339:IPR007159; KEGG: apv:Apar_0844 XRE family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; SPTR: C1YTS3 Looped-hinge helix DNA binding domain, AbrB family; TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family
YP_003678936.1	COGs: COG1683 conserved hypothetical protein; InterPro IPR007553; KEGG: tfu:Tfu_1211 hypothetical protein; PFAM: protein of unknown function DUF523; SPTR: C1YTS2 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF523)
YP_003678937.1	COGs: COG0262 dihydrofolate reductase; InterPro IPR002734; KEGG: nca:Noca_3842 bifunctional deaminase-reductase-like protein; PFAM: bifunctional deaminase-reductase domain protein; SPTR: C1YTS1 dihydrofolate reductase; PFAM: RibD C-terminal domain
YP_003678938.1	COGs: COG2169 adenosine deaminase; InterPro IPR000005:IPR018060:IPR009057; KEGG: gbr:Gbro_2735 helix-turn-helix, AraC domain protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C1YTS0 transcriptional regulator, AraC family
YP_003678939.1	COGs: COG3507 beta-xylosidase; InterPro IPR017909:IPR016840:IPR006311:IPR006710; KEGG: ami:Amir_3750 arabinan endo-1,5-alpha-L-arabinosidase; PFAM: glycoside hydrolase family 43; PRIAM: arabinan endo-1,5-alpha-L-arabinosidase; SPTR: C1YTR9 beta-xylosidase; PFAM: glycosyl hydrolases family 43; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003678940.1	COGs: COG0591 Na+/proline symporter; InterPro IPR019900:IPR001734:IPR018212; KEGG: sen:SACE_6252 sodium:solute symporter; PFAM: Na+/solute symporter; SPTR: C1YTR8 SSS sodium solute transporter; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Sodium:solute symporter family; TIGRFAM: SSS sodium solute transporter superfamily
YP_003678941.1	KEGG: sgr:SGR_4367 hypothetical protein; SPTR: C1YTR7  uncharacterized protein
YP_003678942.1	KEGG: sro:Sros_4695 hypothetical protein; SPTR: C1YTR6 lysophospholipase
YP_003678943.1	COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: sro:Sros_5436 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YTR5 Predicted nucleoside-diphosphate sugar epimerase; PFAM: NmrA-like family
YP_003678944.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR014284:IPR014303:IPR007627:IPR013249:IPR 013325:IPR013324; KEGG: sco:SCO7112 ECF family RNA polymerase sigma factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: C1YTR4 RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, TIGR02957 family; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, TIGR02957 family
YP_003678945.1	InterPro IPR001958:IPR011701:IPR016196; KEGG: sgr:SGR_5792 major facilitator superfamily permease; PFAM: major facilitator superfamily MFS_1; SPTR: C1YTR3 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003678946.1	COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: ami:Amir_4161 protein of unknown function DUF112 transmembrane; PFAM: protein of unknown function DUF112 transmembrane; SPTR: C1YTR2 Uncharacterized conserved protein; PFAM: tripartite tricarboxylate transporter TctA family
YP_003678947.1	KEGG: ami:Amir_4162 hypothetical protein; SPTR: C1YTR1  uncharacterized protein
YP_003678948.1	COGs: COG3181 conserved hypothetical protein; InterPro IPR005064; KEGG: ami:Amir_4163 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C1YTR0 Uncharacterized conserved protein; PFAM: tripartite tricarboxylate transporter family receptor
YP_003678949.1	COGs: COG1048 Aconitase A; InterProIPR015931:IPR018136:IPR001030:IPR015932:IPR 000573:IPR015928; KEGG: ami:Amir_2132 aconitate hydratase 1; PFAM: aconitate hydratase domain protein; SPTR: C1YTQ9 Aconitase A; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1
YP_003678950.1	COGs: COG1802 transcriptional regulators; InterPro IPR011711:IPR000524:IPR011991; KEGG: sen:SACE_4337 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator; SPTR: C1YTQ8 transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003678951.1	COGs: COG0657 esterase/lipase; InterPro IPR013094; KEGG: hau:Haur_2140 alpha/beta hydrolase domain-containing protein; PFAM: alpha/beta hydrolase; SPTR: C1YTQ7 esterase/lipase; PFAM: alpha/beta hydrolase fold
YP_003678952.1	COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155:IPR013785; KEGG: sco:SCO7586 oxidoreductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase; SPTR: C1YTQ6 NADH:flavin oxidoreductase; PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_003678953.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR009061; KEGG: sco:SCO7585 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YTQ5 Predicted transcriptional regulator; PFAM: MerR family regulatory protein; MerR, DNA binding
YP_003678954.1	KEGG: sco:SCP1.261c  secreted protein; SPTR: C1YTQ4  uncharacterized protein
YP_003678955.1	InterPro IPR001647:IPR009057:IPR012287; KEGG: bfa:Bfae_17920 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YTQ3 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003678956.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: bfa:Bfae_17930 predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold; SPTR: C1YTQ2 Predicted hydrolase or acyltransferase of alpha/beta superfamily
YP_003678957.1	InterProIPR008979:IPR006626:IPR011050:IPR005084:IPR 012334; KEGG: sco:SCO7228 polysaccharide lyase; PFAM: carbohydrate binding family 6; PRIAM: pectate disaccharide-lyase; SPTR: C1YTQ1 CBM6-containing protein; PFAM: carbohydrate binding module (family 6)
YP_003678958.1	InterPro IPR011051; KEGG: sgr:SGR_6503 hypothetical protein; SPTR: C1YTP9  uncharacterized protein; PFAM: Cupin domain
YP_003678959.1	KEGG: sco:SCO0425 hypothetical protein; SPTR: C1YTP8  uncharacterized protein
YP_003678960.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104:IPR016040; KEGG: sma:SAV_7022 oxidoreductase; PFAM: oxidoreductase domain protein; oxidoreductase domain; SPTR: C1YTP7 Predicted dehydrogenase; PFAM: oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase family, C-terminal alpha/beta domain
YP_003678961.1	COGs: COG1609 transcriptional regulators; InterPro IPR000843:IPR001761:IPR010982; KEGG: kra:Krad_2947 regulatory protein LacI; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: C1YTP6 LacI family transcriptional regulator; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003678962.1	COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR011059:IPR013108; KEGG: sen:SACE_3486 exoenzymes regulatory protein AepA precursor; PFAM: amidohydrolase; SPTR: C1YTP5 Predicted TIM-barrel fold metal-dependent hydrolase, COG1574; PFAM: Amidohydrolase family
YP_003678963.1	InterPro IPR005829:IPR011701:IPR016196; KEGG: msm:MSMEG_3398 integral membrane transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YTP4 Na+/melibiose symporter-like transporter; PFAM: Major Facilitator Superfamily
YP_003678964.1	COGs: COG0624 acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR011650:IPR010158:IPR002933; KEGG: aau:AAur_0749  N-carbamoyl-L-amino acid amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; PRIAM: N-carbamoyl-L-amino-acid hydrolase; SPTR: C1YTP3 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase family M20/M25/M40; TIGRFAM: amidase, hydantoinase/carbamoylase family
YP_003678965.1	KEGG: sen:SACE_3483 hypothetical protein; SPTR: C1YTP2  uncharacterized protein
YP_003678966.1	SPTR: C1YTP1  uncharacterized protein
YP_003678967.1	COGs: COG3476 tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog); InterPro IPR004307; KEGG: saq:Sare_3966 TspO and MBR like protein; PFAM: TspO/MBR family protein; SPTR: C1YTP0 tryptophan-rich sensory protein; PFAM: TspO/MBR family
YP_003678968.1	KEGG: hau:Haur_3629 hypothetical protein; SPTR: C1YTN9  uncharacterized protein
YP_003678969.1	KEGG: acp:A2cp1_1438 ATP-dependent nuclease subunit B-like protein; SPTR: C1YTN8  uncharacterized protein
YP_003678970.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639:IPR000073; KEGG: cai:Caci_6541 alpha/beta hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YTN7 Predicted hydrolase or acyltransferase of alpha/beta superfamily (Fragment); PFAM: alpha/beta hydrolase fold
YP_003678971.1	COGs: COG1472 beta-glucosidase-related glycosidase; InterPro IPR002772:IPR001764:IPR019800:IPR017853; KEGG: nfa:nfa29580  beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; SPTR: C1YVN8 beta-glucosidase-like glycosyl hydrolase; PFAM: glycosyl hydrolase family 3 C terminal domain; glycosyl hydrolase family 3 N terminal domain
YP_003678972.1	InterPro IPR001647:IPR009057:IPR011075:IPR012287; KEGG: ami:Amir_4873 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YVN7 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003678973.1	COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: cmi:CMM_2938 ferric uptake regulator family protein; PFAM: ferric-uptake regulator; SPTR: C1YVN6 Fe2+/Zn2+ uptake regulation protein; PFAM: ferric uptake regulator family
YP_003678974.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR003560:IPR002198:IPR016040; KEGG: tfu:Tfu_1873 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Q47NR3 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; RBL00455; PFAM: short chain dehydrogenase
YP_003678975.1	COGs: COG1169 Isochorismate synthase; InterPro IPR004561:IPR015890:IPR005801; KEGG: sen:SACE_3854 isochorismate synthase DhbC; PFAM: chorismate binding-like; SPTR: C1YVN3 Isochorismate synthase family protein; TIGRFAM: isochorismate synthase; PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases
YP_003678976.1	COGs: COG1535 Isochorismate hydrolase; InterPro IPR000868:IPR016291:IPR003881; KEGG: gym:GYMC10_4574 isochorismatase; PFAM: isochorismatase hydrolase; PRIAM: isochorismatase; SPTR: C1YVN2 Isochorismate hydrolase; PFAM: isochorismatase family
YP_003678977.1	COGs: COG1021 peptide arylation protein; InterPro IPR020845:IPR000873; KEGG: sco:SCO7681 AMP-binding ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YVN1 peptide arylation enzyme; PFAM: AMP-binding enzyme; TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase
YP_003678978.1	COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR006163:IPR001242:IPR013624:IPR 000873:IPR009081:IPR006162:IPR020845; KEGG: sco:SCO7682 non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Non-ribosomal peptide synthetase; SPTR: C1YVN0 amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation protein; PFAM: phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; Nonribosomal peptide synthase; TIGRFAM: amino acid adenylation domain
YP_003678979.1	COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR001242:IPR013624:IPR000873:IPR 013217:IPR006163:IPR001031:IPR009081:IPR006162:IPR020845; KEGG: sco:SCO7683 non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; Non-ribosomal peptide synthetase; methyltransferase type 12; phosphopantetheine-binding; thioesterase; SPTR: C1YVM9 amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation protein; PFAM: thioesterase domain; phosphopantetheine attachment site; methyltransferase domain; Condensation domain; Nonribosomal peptide synthase; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain
YP_003678980.1	COGs: COG1748 saccharopine dehydrogenase and related protein; InterPro IPR001509:IPR016040; KEGG: sco:SCO7684 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YVM8 saccharopine dehydrogenase-like oxidoreductase; PFAM: saccharopine dehydrogenase
YP_003678981.1	COGs: COG4693 oxidoreductase (NAD-binding) involved in siderophore biosynthesis; InterPro IPR010091:IPR000683:IPR016040; KEGG: sco:SCO7685 hypothetical protein; PFAM: oxidoreductase domain protein; SPTR: C1YVM7 Thiazolinyl imide reductase; TIGRFAM: thiazolinyl imide reductase; PFAM: oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: thiazolinyl imide reductase
YP_003678982.1	COGs: COG3208 thioesterase involved in non-ribosomal peptide biosynthesis; InterPro IPR001031; KEGG: sco:SCO7687 thioesterase; PFAM: thioesterase; PRIAM: Oleoyl-[acyl-carrier-protein] hydrolase; SPTR: C1YVM6 Predicted thioesterase involved in non-ribosomal peptide biosynthesis; PFAM: thioesterase domain
YP_003678983.1	InterPro IPR013217; KEGG: sco:SCO7688 hypothetical protein; PFAM: methyltransferase type 12; SPTR: C1YVM5 methyltransferase family protein; PFAM: methyltransferase domain
YP_003678984.1	COGs: COG1132 ABC-type multidrug transporter ATPase and permeases; InterProIPR003593:IPR001140:IPR003439:IPR011527:IPR 017940:IPR017871; KEGG: sco:SCO7689 ABC transporter ATP-binding protein; PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: AAA ATPase; SPTR: C1YVM4 ABC-type multidrug transporter ATPase and permease component; PFAM: ABC transporter transmembrane protein; ABC transporter
YP_003678985.1	COGs: COG1132 ABC-type multidrug transporter ATPase and permeases; InterProIPR003593:IPR001140:IPR003439:IPR011527:IPR 017940:IPR017871; KEGG: sco:SCO7690 ABC transporter ATP-binding protein; PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: AAA ATPase; SPTR: C1YVM3 ABC-type multidrug transporter ATPase and permease component; PFAM: ABC transporter transmembrane protein; ABC transporter
YP_003678986.1	COGs: COG2124 cytochrome P450; InterPro IPR017972:IPR001128:IPR002397:IPR017973; KEGG: sco:SCO7686 cytochrome P450; PFAM: cytochrome P450; SPTR: C1YVM2 cytochrome P450; PFAM: cytochrome P450
YP_003678987.1	InterPro IPR010693; KEGG: mjl:Mjls_0507  ferredoxin; PFAM: protein of unknown function DUF1271; SPTR: C1YVM1 Ferredoxin; PFAM: protein of unknown function (DUF1271)
YP_003678988.1	COGs: COG0747 ABC-type dipeptide transporter periplasmic component; InterPro IPR000914; KEGG: stp:Strop_2653 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: C1YVM0 ABC-type dipeptide transporter periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_003678989.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: saq:Sare_2074 binding-protein-dependent transporters inner membrane component; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YVL9 ABC-type dipeptide/oligopeptide/nickel transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678990.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: saq:Sare_2075 binding-protein-dependent transporters inner membrane component; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YWD3 ABC-type dipeptide/oligopeptide/nickel transporter permease component (Fragment); PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678991.1	COGs: COG1123 ATPase components of various ABC-type transporters contain duplicated ATPase; InterPro IPR003593:IPR003439:IPR017871; KEGG: stp:Strop_2650 ABC transporter related; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YWD2 ATPase component of various ABC-type transporters with duplicated ATPase domain; PFAM: ABC transporter
YP_003678992.1	KEGG: nph:NP3798A major facilitator family oxalate/formate antiporter; SPTR: C1YWD1  uncharacterized protein
YP_003678993.1	COGs: COG0747 ABC-type dipeptide transporter periplasmic component; InterPro IPR000914; KEGG: ami:Amir_4927 extracellular solute-binding protein family 5; PFAM: extracellular solute-binding protein family 5; SPTR: C1YWD0 ABC-type dipeptide transporter periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_003678994.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: ami:Amir_4928 binding-protein-dependent transporters inner membrane component; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YWC9 ABC-type dipeptide/oligopeptide/nickel transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003678995.1	COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transporter ATPase component; InterProIPR010066:IPR003439:IPR017871:IPR003593:IPR 013563; KEGG: tcu:Tcur_3276 oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; SPTR: C1YWC8 oligopeptide/dipeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region
YP_003678996.1	COGs: COG1123 ATPase components of various ABC-type transporters contain duplicated ATPase; InterPro IPR017871:IPR003593:IPR003439:IPR013563; KEGG: ace:Acel_1120 oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter related; oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: C1YWC7 ATPase component of various ABC-type transporters with duplicated ATPase domain; PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region
YP_003678997.1	InterPro IPR011701:IPR016196; KEGG: sgr:SGR_4017 major facilitator superfamily permease; PFAM: major facilitator superfamily MFS_1; SPTR: C1YWC6 Major Facilitator Superfamily transporter; PFAM: Major Facilitator Superfamily
YP_003678998.1	COGs: COG1653 ABC-type sugar transporter periplasmic component; InterPro IPR006059; KEGG: tfu:Tfu_1702 sugar-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: C1YWC5 carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein
YP_003678999.1	COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342:IPR018110; KEGG: sen:SACE_4598 mandelate racemase/muconate lactonizing enzyme; PFAM: mandelate racemase/muconate lactonizing protein; SPTR: C1YWC4 Galactarate dehydratase; L-talarate dehydratase; PFAM: mandelate racemase / muconate lactonizing enzyme, C-terminal domain; mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YP_003679000.1	COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR009002:IPR012349:IPR002563; KEGG: sgr:SGR_4280 hypothetical protein; PFAM: flavin reductase domain protein FMN-binding; SPTR: C1YWC3 Conserved protein of DIM6/NTAB family, COG1853; PFAM: Flavin reductase like domain
YP_003679001.1	KEGG: cai:Caci_6993 ABC transporter; SPTR: C7Q554 ABC transporter
YP_003679002.1	COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567; KEGG: sro:Sros_8022 peptidyl-dipeptidase DCP; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; PRIAM: peptidyl-dipeptidase Dcp; SPTR: C1YWC1 peptidyl-dipeptidase Dcp; PFAM: peptidase family M3
YP_003679003.1	COGs: COG0509 glycine cleavage system protein H (lipoate-binding); InterPro IPR017453:IPR003016:IPR002930:IPR011053; KEGG: ppf:Pput_5100 glycine cleavage system protein H; PFAM: glycine cleavage H-protein; SPTR: C1YWL7 glycine cleavage system protein H; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein
YP_003679004.1	COGs: COG1024 enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: rer:RER_49250 enoyl-CoA hydratase; PFAM: enoyl-CoA hydratase/isomerase; SPTR: C1YWL6 enoyl-CoA hydratase/carnithine racemase; PFAM: enoyl-CoA hydratase/isomerase family
YP_003679005.1	KEGG: sgr:SGR_6201 hypothetical protein; SPTR: C1YWL5  uncharacterized protein
YP_003679006.1	COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterProIPR012676:IPR004095:IPR003607:IPR007685:IPR 006674; KEGG: tcu:Tcur_1666 (p)ppGpp synthetase I, SpoT/RelA; PFAM: TGS domain protein; RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; PRIAM: GTP diphosphokinase; SMART: metal-dependent phosphohydrolase HD region; SPTR: C1YWL4 Guanosine polyphosphate synthetase/pyrophosphohydrolase; PFAM: HD domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family
YP_003679007.1	COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155:IPR013785; KEGG: sgr:SGR_6894  oxidoreductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase; SPTR: C1YWL3 NADH:flavin oxidoreductase; PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_003679008.1	InterPro IPR001845:IPR011991; KEGG: sen:SACE_4355 transcription regulator ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: C1YWL2 ArsR family transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family
YP_003679009.1	COGs: COG0492 thioredoxin reductase; InterPro IPR013027:IPR000103:IPR003953; KEGG: sro:Sros_5357 FAD dependent oxidoreductase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: C1YWL1 thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003679010.1	KEGG: smd:Smed_4435 hypothetical protein; SPTR: C1YWL0  uncharacterized protein
YP_003679011.1	COGs: COG2311 membrane protein; InterPro IPR007299:IPR007349; KEGG: tfu:Tfu_0622 hypothetical protein; PFAM: protein of unknown function DUF405; protein of unknown function DUF418; SPTR: C1YWK9 Predicted membrane protein, COG2311 (Fragment); PFAM: protein of unknown function (DUF418)
YP_003679012.1	KEGG: nfa:nfa24120 hypothetical protein; SPTR: C1YWC0  uncharacterized protein; PFAM: protein of unknown function (DUF2795)
YP_003679013.1	COGs: COG0428 divalent heavy-metal cations transporter; KEGG: sco:SCO7819 integral membrane protein; SPTR: C1YWB9 Predicted divalent heavy-metal cations transporter
YP_003679014.1	InterPro IPR011701:IPR016196; KEGG: stp:Strop_2361 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YWB8 Sugar phosphate permease; PFAM: Major Facilitator Superfamily
YP_003679015.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sgr:SGR_6919 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YWB7 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003679016.1	InterPro IPR001845:IPR011991; KEGG: xce:Xcel_3343 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: C1YWB6 transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family
YP_003679017.1	InterPro IPR011051:IPR013096:IPR014710; KEGG: rle:RL3232 hypothetical protein; PFAM: cupin; SPTR: C1YWB5 mannose-6-phosphate isomerase; PFAM: Cupin domain
YP_003679018.1	KEGG: fjo:Fjoh_2934 hypothetical protein; SPTR: C1YWB4  uncharacterized protein
YP_003679019.1	COGs: COG4264 Siderophore synthetase component; InterPro IPR007310; KEGG: sma:SAV_5269 siderophore biosynthetic enzyme; PFAM: IucA/IucC family protein; SPTR: C1YWB3 Siderophore synthetase component; PFAM: ferric iron reductase FhuF-like transporter; IucA / IucC family
YP_003679020.1	InterPro IPR019432; KEGG: stp:Strop_2549 hypothetical protein; PFAM: Siderophore biosynthesis protein, conserved region; SPTR: C1YWB2 acetyltransferase, ribosomal protein N-acetylase; PFAM: Siderophore biosynthesis protein domain
YP_003679021.1	COGs: COG3486 lysine/ornithine N-monooxygenase; KEGG: cai:Caci_4294 L-lysine 6-monooxygenase (NADPH); PRIAM: L-lysine 6-monooxygenase (NADPH); SPTR: C1YWB1 lysine/ornithine N-monooxygenase
YP_003679022.1	COGs: COG0076 glutamate decarboxylase and related PLP-dependent protein; InterProIPR015424:IPR015422:IPR010977:IPR002129:IPR 015421; KEGG: cai:Caci_4295 pyridoxal-dependent decarboxylase; PFAM: pyridoxal-dependent decarboxylase; SPTR: C1YWB0 PLP-dependent enzyme, glutamate decarboxylase; PFAM: pyridoxal-dependent decarboxylase conserved domain
YP_003679023.1	KEGG: sma:SAV_1688 hypothetical protein; SPTR: C1YWA9  uncharacterized protein
YP_003679024.1	KEGG: cai:Caci_1894 ABC transporter membrane protein; SPTR: C1YWA8  uncharacterized protein; PFAM: ABC-2 type transporter
YP_003679025.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: cai:Caci_1895 ABC transporter related; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YWA7 ABC-type multidrug transporter ATPase component; PFAM: ABC transporter
YP_003679026.1	KEGG: fal:FRAAL6745  serine-threonine protein kinase; SPTR: C1YWA6  uncharacterized protein
YP_003679027.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR000792:IPR001789:IPR011991:IPR011006:IPR 016032; KEGG: cai:Caci_1897 LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YWA5 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003679028.1	KEGG: sen:SACE_2801 integral membrane alanine and leucine rich protein; SPTR: C1YWA4  uncharacterized protein; PFAM: protein of unknown function (DUF3159)
YP_003679029.1	InterPro IPR006764; KEGG: cai:Caci_6213 protein of unknown function DUF574; PFAM: protein of unknown function DUF574; SPTR: C1YWA3 O-methyltransferase involved in polyketide biosynthesis (Fragment); PFAM: protein of unknown function (DUF574)
YP_003679030.1	COGs: COG3940 beta-xylosidase; InterPro IPR006710; KEGG: sco:SCO7501 hydrolase; PFAM: glycoside hydrolase family 43; PRIAM: alpha-N-arabinofuranosidase; SPTR: C1YVX0 Predicted beta-xylosidase; PFAM: glycosyl hydrolases family 43
YP_003679031.1	COGs: COG0395 ABC-type sugar transporter permease component; InterPro IPR000515; KEGG: sco:SCO7505 integral membrane binding-protein-dependent transporter; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YVW9 carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003679032.1	COGs: COG1175 ABC-type sugar transporters permease components; InterPro IPR000515; KEGG: sco:SCO7504 integral membrane binding-protein-dependent transporter; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YVW8 carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003679033.1	COGs: COG1653 ABC-type sugar transporter periplasmic component; InterPro IPR006059:IPR017909; KEGG: sco:SCO7503 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: C1YVW7 carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein
YP_003679034.1	COGs: COG3250 beta-galactosidase/beta-glucuronidase; InterProIPR006104:IPR006102:IPR006103:IPR008979:IPR 017853:IPR013812:IPR013781; KEGG: sco:SCO7506 hydrolase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; SPTR: C1YVW6 beta-galactosidase/beta-glucuronidase; PFAM: domain; glycosyl hydrolases family 2, TIM barrel domain; glycosyl hydrolases family 2, sugar binding domain
YP_003679035.1	COGs: COG1609 transcriptional regulators; InterPro IPR000843:IPR001761:IPR010982; KEGG: sco:SCO7502 LacI family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: C1YVW5 LacI family transcriptional regulator; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003679036.1	KEGG: fal:FRAAL1884  riboflavin/cytosine deaminase (partial); SPTR: C1YVW4  uncharacterized protein
YP_003679037.1	InterPro IPR001387:IPR010982; KEGG: tfu:Tfu_1656 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YVW3 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003679038.1	InterPro IPR007278; KEGG: tfu:Tfu_0973 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YVW2  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003679039.1	KEGG: sen:SACE_2664 hypothetical protein; SPTR: C1YVW1  uncharacterized protein
YP_003679040.1	KEGG: sro:Sros_5794 exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase-like protein; SPTR: C1YVW0  uncharacterized protein; PFAM: Predicted periplasmic protein (DUF2233)
YP_003679041.1	COGs: COG2271 Sugar phosphate permease; InterPro IPR011701:IPR016196; KEGG: cai:Caci_4380 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: C1YVV9 Sugar phosphate permease; PFAM: Major Facilitator Superfamily
YP_003679042.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sco:SCO0310 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YVV8 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003679043.1	COGs: COG0318 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR020845; KEGG: sco:SCO0311 ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YVV7 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme
YP_003679044.1	COGs: COG1960 acyl-CoA dehydrogenase; InterProIPR013786:IPR006091:IPR006090:IPR009100:IPR 013764:IPR006092:IPR009075; KEGG: sco:SCO0312 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: C1YVV6 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain
YP_003679045.1	COGs: COG2015 Alkyl sulfatase and related hydrolase; InterPro IPR016083:IPR001279; KEGG: sco:SCO0314 secreted protein; SMART: beta-lactamase; SPTR: C1YVV5 Alkyl sulfatase-like hydrolase; PFAM: metallo-beta-lactamase superfamily
YP_003679046.1	COGs: COG2128 conserved hypothetical protein; InterPro IPR004675:IPR003779; KEGG: cur:cur_0190 hypothetical protein; PFAM: carboxymuconolactone decarboxylase; SPTR: C1YVV4 Alkylhydroperoxidase AhpD family core domain; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain
YP_003679047.1	InterPro IPR016181:IPR000182; KEGG: mav:MAV_0037 hypothetical protein; SPTR: C1YVV3 Predicted acetyltransferase, COG2388
YP_003679048.1	COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048; KEGG: sen:SACE_3319 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: C1YVV2 Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like monooxygenase
YP_003679049.1	InterPro IPR000835:IPR011991; KEGG: sco:SCO7727 MarR family regulatory protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YVV1 MarR family transcriptional regulator; PFAM: MarR family
YP_003679050.1	KEGG: rop:ROP_43490 hypothetical protein; SPTR: C1YVV0  uncharacterized protein
YP_003679051.1	COGs: COG1335 amidase related to nicotinamidase; InterPro IPR000868; KEGG: sgr:SGR_3113  hydrolase; PFAM: isochorismatase hydrolase; SPTR: C1YVU9 nicotinamidase-like amidase; PFAM: isochorismatase family
YP_003679052.1	COGs: COG2388 acetyltransferase; InterPro IPR000182:IPR016181; KEGG: sco:SCO7728 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YVU8 Predicted acetyltransferase, COG2388; PFAM: acetyltransferase (GNAT) family
YP_003679053.1	COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644:IPR017080:IPR007055; KEGG: tfu:Tfu_3042 CBS; PFAM: hypothetical protein; transport-associated; SMART: hypothetical protein; SPTR: C1YVU6 CBS-domain-containing membrane protein; PFAM: CBS domain; phospholipid-binding domain
YP_003679054.1	InterPro IPR001584:IPR012337:IPR009057; KEGG: sro:Sros_4349 transposase; PFAM: Integrase catalytic region; SPTR: C1YNR8 Integrase family protein; PFAM: Integrase core domain
YP_003679055.1	COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR007055:IPR000644:IPR017080:IPR013785; KEGG: tfu:Tfu_1310 CBS; PFAM: hypothetical protein; transport-associated; SMART: hypothetical protein; SPTR: C1YUN8 CBS-domain-containing membrane protein; PFAM: CBS domain; phospholipid-binding domain
YP_003679056.1	COGs: COG1554 Trehalose and maltose hydrolase ( phosphorylase); InterProIPR008928:IPR005196:IPR012341:IPR005195:IPR 011013:IPR017045; KEGG: tfu:Tfu_3044 trehalose 6-phosphate phosphorylase; PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; SPTR: C1YUN7 Trehalose/maltose hydrolase or phosphorylase; PFAM: glycosyl hydrolase family 65 central catalytic domain; glycosyl hydrolase family 65, N-terminal domain
YP_003679057.1	InterPro IPR006015:IPR006016:IPR014729; KEGG: tfu:Tfu_3032 hypothetical protein; PFAM: UspA domain protein; SPTR: C1YUN6 Universal stress protein UspA-like protein; PFAM: Universal stress protein family
YP_003679058.1	InterPro IPR006015:IPR014729:IPR006016; KEGG: tfu:Tfu_1412 hypothetical protein; PFAM: UspA domain protein; SPTR: C1YUN5 Universal stress protein UspA-like protein; PFAM: Universal stress protein family
YP_003679059.1	COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR005110:IPR001453:IPR005111; KEGG: tfu:Tfu_2115  molybdopterin biosynthesis protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; SMART: molybdopterin binding domain; SPTR: C1YUN4 Molybdopterin biosynthesis enzyme; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain
YP_003679060.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: sen:SACE_0785 major facilitator superfamily multidrug transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YUN3 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily
YP_003679061.1	InterPro IPR001647:IPR009057:IPR012287; KEGG: sen:SACE_0786 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YUN2 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003679062.1	InterPro IPR000182:IPR016181; KEGG: svi:Svir_30490 acetyltransferase (GNAT) family protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YUN1 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003679063.1	COGs: COG1482 phosphomannose isomerase; InterPro IPR011051:IPR001250:IPR016305:IPR014710; KEGG: tfu:Tfu_0016 mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type I; PRIAM: mannose-6-phosphate isomerase; SPTR: C1YUN0 mannose-6-phosphate isomerase; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I
YP_003679064.1	COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: sgr:SGR_5865  FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: peptidylprolyl isomerase FKBP-type; SPTR: C1YUM9 peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase
YP_003679065.1	COGs: COG1960 acyl-CoA dehydrogenase; InterProIPR006092:IPR006091:IPR006090:IPR009100:IPR 009075:IPR013786:IPR013764:IPR006089; KEGG: tfu:Tfu_1999 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: C1YUM8 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain
YP_003679066.1	InterProIPR003012:IPR001647:IPR004111:IPR011075:IPR 009057:IPR012287:IPR015893; KEGG: tfu:Tfu_1997 TetR family transcriptional regulator; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; SPTR: C1YUM7 transcriptional regulator, COG1309; PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family
YP_003679067.1	COGs: COG2409 drug exporter of the RND superfamily; InterPro IPR001036:IPR000731; KEGG: cms:CMS_0370  integral membrane protein; SPTR: C1YUM6  uncharacterized protein; PFAM: MMPL family
YP_003679068.1	InterPro IPR001647:IPR009057:IPR012287; KEGG: krh:KRH_22280 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YUM5 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003679069.1	KEGG: bcv:Bcav_2693 hypothetical protein; SPTR: C1YUM4  uncharacterized protein
YP_003679070.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR003593:IPR003439; KEGG: bcv:Bcav_2692 ABC transporter related; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YUM2 ABC-type multidrug transporter ATPase component; PFAM: ABC transporter
YP_003679071.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594; KEGG: bcv:Bcav_2690 histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C1YUM1 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase
YP_003679072.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR000792:IPR001789:IPR011006:IPR016032:IPR 011991; KEGG: stp:Strop_0395 LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YUM0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003679073.1	InterPro IPR004378; KEGG: fal:FRAAL1613 hypothetical protein; SPTR: C1YUL9  uncharacterized protein; PFAM: Domain of unknown function (DUF385); TIGRFAM: conserved hypothetical protein TIGR00026
YP_003679074.1	KEGG: similar to hypothetical protein 709; K09228 KRAB domain-containing hypothetical protein
YP_003679075.1	COGs: COG2128 conserved hypothetical protein; InterPro IPR004675:IPR003779; KEGG: fre:Franean1_2370 alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase; SPTR: C1YUL8 Alkylhydroperoxidase AhpD family core domain; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain
YP_003679076.1	COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR020845:IPR000873; KEGG: sco:SCO6790 long chain fatty acid CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YUL7 AMP-forming long-chain acyl-CoA synthetase; PFAM: AMP-binding enzyme
YP_003679077.1	COGs: COG1414 transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: nml:Namu_3326 IclR family transcriptional regulator; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; SPTR: C1YUL6 transcriptional regulator, COG1414; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_003679078.1	COGs: COG0684 Demethylmenaquinone methyltransferase; InterPro IPR016040:IPR005493:IPR008927; KEGG: ach:Achl_0095 dimethylmenaquinone methyltransferase; PFAM: dimethylmenaquinone methyltransferase; SPTR: C1YUL5 Demethylmenaquinone methyltransferase; PFAM: Demethylmenaquinone methyltransferase; NAD binding domain of 6-phosphogluconate dehydrogenase
YP_003679079.1	COGs: COG1593 TRAP-type C4-dicarboxylate transporter large permease; InterPro IPR010656; KEGG: bpu:BPUM_3411 TRAP-T family tripartite ATP-independent periplasmic membrane protein; PFAM: TRAP C4-dicarboxylate transporter permease DctM subunit; SPTR: C1YUL4 TRAP-type C4-dicarboxylate transporter large permease; PFAM: DctM-like transporters
YP_003679080.1	KEGG: bpu:BPUM_3410 hypothetical protein; SPTR: C1YUL3  uncharacterized protein
YP_003679081.1	KEGG: tfu:Tfu_2982 hypothetical protein; SPTR: C1YUL2  uncharacterized protein
YP_003679082.1	InterPro IPR011991; KEGG: tcu:Tcur_2204 hypothetical protein; SPTR: C1YUL1  uncharacterized protein
YP_003679083.1	COGs: COG1680 beta-lactamase class C and other penicillin binding protein; InterPro IPR001466:IPR012338:IPR001586; KEGG: rha:RHA1_ro05611 beta-lactamase; PFAM: beta-lactamase; SPTR: C1YUL0 Penicillin-binding protein, beta-lactamase class C; PFAM: beta-lactamase
YP_003679084.1	KEGG: sro:Sros_2550 beta-lactamase class C and other penicillin binding protein-like protein; SPTR: C1YUK9  uncharacterized protein
YP_003679085.1	InterPro IPR003594; KEGG: sgr:SGR_4396  sensor-like histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YUK8 histidine kinase; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003679086.1	COGs: COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid; InterPro IPR004942; KEGG: svi:Svir_06950 hypothetical protein; PFAM: Roadblock/LC7 family protein; SPTR: C1YUK7 Uncharacterized conserved protein; PFAM: Roadblock/LC7 domain
YP_003679087.1	InterPro IPR007995; KEGG: sen:SACE_1151 hypothetical protein; PFAM: protein of unknown function DUF742; SPTR: C1YUK6  uncharacterized protein; PFAM: protein of unknown function (DUF742)
YP_003679088.1	COGs: COG2229 GTPase; InterPro IPR001806:IPR004130; KEGG: sgr:SGR_3106  ATP/GTP-binding protein; PFAM: protein of unknown function ATP binding; SPTR: C1YUK5 Predicted GTPase, COG2229; PFAM: Conserved hypothetical ATP binding protein; TIGRFAM: small GTP-binding protein domain
YP_003679089.1	COGs: COG2124 cytochrome P450; InterPro IPR002397:IPR001128; KEGG: fal:FRAAL0483  cytochrome P450; SPTR: C1YUK4 cytochrome P450
YP_003679090.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002198:IPR002347; KEGG: sma:SAV_7438 oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YUK3  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003679091.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639:IPR000073; KEGG: sma:SAV_141 epoxide hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YUK2 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003679092.1	InterPro IPR016461:IPR001077; KEGG: bja:blr7665  methyltransferase; PFAM: O-methyltransferase family 2; SPTR: C1YUK1 O-methyltransferase; PFAM: O-methyltransferase
YP_003679093.1	COGs: COG0778 nitroreductase; InterPro IPR000415; KEGG: mtp:Mthe_1448 nitroreductase; PFAM: nitroreductase; SPTR: C1YUK0 nitroreductase; PFAM: nitroreductase family
YP_003679094.1	KEGG: mch:Mchl_3458 hypothetical protein; SPTR: C1YUJ9  uncharacterized protein
YP_003679095.1	KEGG: mbt:JTY_2286 hypothetical protein; SPTR: C1YUJ8  uncharacterized protein
YP_003679096.1	InterPro IPR016461:IPR001077:IPR000843; KEGG: sen:SACE_4560 O-methyltransferase family protein; PFAM: O-methyltransferase family 2; SPTR: C1YUJ7 O-methyltransferase; PFAM: O-methyltransferase
YP_003679097.1	COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR003000; KEGG: rha:RHA1_ro01309 NAD-dependent deacetylase; PFAM: silent information regulator protein Sir2; SPTR: C1YUJ6 NAD-dependent protein deacetylase, SIR2 family; PFAM: Sir2 family
YP_003679098.1	KEGG: avi:Avi_6008 hypothetical protein; SPTR: C1YUJ5  uncharacterized protein
YP_003679099.1	COGs: COG1038 pyruvate carboxylase; InterProIPR000891:IPR005930:IPR005479:IPR016185:IPR 005482:IPR011053:IPR005481:IPR000089:IPR011761:IPR013816:I PR011764:IPR013817:IPR003379:IPR011054:IPR013785; KEGG: sco:SCO0546 pyruvate carboxylase; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; Conserved carboxylase region; biotin carboxylase domain protein; pyruvate carboxyltransferase; carbamoyl-phosphate synthetase large chain domain protein; biotin/lipoyl attachment domain-containing protein; SMART: biotin carboxylase domain protein; SPTR: C1YUJ4 pyruvate carboxylase; TIGRFAM: pyruvate carboxylase; PFAM: carbamoyl-phosphate synthase L chain, ATP binding domain; HMGL-like; Biotin carboxylase C-terminal domain; carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: pyruvate carboxylase
YP_003679100.1	COGs: COG5483 conserved hypothetical protein; InterPro IPR014519:IPR010556; KEGG: pde:Pden_4004 hypothetical protein; PFAM: protein of unknown function DUF1130; SPTR: C1YUJ3 Uncharacterized conserved protein; PFAM: protein of unknown function, DUF488
YP_003679101.1	KEGG: nha:Nham_2097 hypothetical protein; SPTR: C1YUJ2  uncharacterized protein; PFAM: protein of unknown function (DUF2945)
YP_003679102.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sro:Sros_5092  TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YUJ1 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003679103.1	InterPro IPR012312; KEGG: sro:Sros_5355 hypothetical protein; PFAM: hemerythrin HHE cation binding domain protein; SPTR: C1YUJ0 hemerythrin HHE cation binding domain-containing protein; PFAM: hemerythrin HHE cation binding domain
YP_003679104.1	KEGG: msl:Msil_2574 protein of unknown function DUF6 transmembrane; SPTR: C1YUI9  uncharacterized protein
YP_003679105.1	KEGG: tcu:Tcur_0736 hypothetical protein; SPTR: C1YUI8  uncharacterized protein; PFAM: Suppressor of fused protein (SUFU)
YP_003679106.1	COGs: COG1649 conserved hypothetical protein; InterPro IPR003790:IPR017853; KEGG: tfu:Tfu_1414 FenI protein; PFAM: protein of unknown function DUF187; SPTR: C1YUI7 Uncharacterized conserved protein; PFAM: Uncharacterised BCR, COG1649
YP_003679107.1	KEGG: lhk:LHK_03184 DipZ; SPTR: C1YUI6  uncharacterized protein
YP_003679108.1	COGs: COG1609 transcriptional regulators; InterPro IPR000843:IPR001761:IPR010982; KEGG: ami:Amir_4130 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: C1YUI5 LacI family transcriptional regulator; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003679109.1	COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342:IPR018110; KEGG: msm:MSMEG_2909 starvation-sensing protein RspA; PFAM: mandelate racemase/muconate lactonizing protein; SPTR: C1YUI4 D-mannonate dehydratase; PFAM: mandelate racemase / muconate lactonizing enzyme, C-terminal domain; mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YP_003679110.1	InterPro IPR011044:IPR015943; KEGG: nfa:nfa23280 hypothetical protein; SPTR: C1YTN6  uncharacterized protein
YP_003679111.1	COGs: COG0803 ABC-type metal ion transporter periplasmic component/surface adhesin; InterPro IPR006128:IPR006129:IPR006127; KEGG: nfa:nfa23270  transporter; PFAM: periplasmic solute binding protein; SPTR: C1YTN5 ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family
YP_003679112.1	InterPro IPR011044; KEGG: nfa:nfa23260  ABC transporter; SPTR: C1YTN4  uncharacterized protein
YP_003679113.1	COGs: COG1108 ABC-type Mn2+/Zn2+ transporters permeases; InterPro IPR001626; KEGG: sco:SCO0475 ABC transporter protein, integral membrane subunit; PFAM: ABC transporter; SPTR: C1YTN3 ABC-type Mn2+/Zn2+ transporter permease; PFAM: ABC 3 transport family
YP_003679114.1	COGs: COG1121 ABC-type Mn/Zn transporters ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: sco:SCO0476 ABC transporter ATP-binding subunit; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YTN2 ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter
YP_003679115.1	COGs: COG2271 Sugar phosphate permease; InterPro IPR011701:IPR016196; KEGG: tfu:Tfu_2214  transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YTN1 Sugar phosphate permease; PFAM: Major Facilitator Superfamily
YP_003679116.1	InterPro IPR011701:IPR016196; KEGG: xce:Xcel_2301 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: C1YTN0 nitrate/nitrite transporter; PFAM: Major Facilitator Superfamily
YP_003679117.1	SPTR: C1YTM9  uncharacterized protein
YP_003679118.1	COGs: COG3263 NhaP-type Na+/H+ and K+/H+ antiporter with a unique C-terminal domain; InterPro IPR006153:IPR006037:IPR016040; KEGG: tcu:Tcur_0086 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; SPTR: C1YTM8 NhaP-type Na+(K+)/H+ antiporter; PFAM: Sodium/hydrogen exchanger family; TrkA-C domain
YP_003679119.1	InterPro IPR006015:IPR014729:IPR006016; KEGG: sti:Sthe_2289 UspA domain protein; PFAM: UspA domain protein; SPTR: C1YTM7 Universal stress family protein; PFAM: Universal stress protein family
YP_003679120.1	InterPro IPR013538; KEGG: sen:SACE_0357 hypothetical protein; PFAM: activator of Hsp90 ATPase 1 family protein; SPTR: C1YTM6 Uncharacterized conserved protein; PFAM: activator of Hsp90 ATPase homolog 1-like protein
YP_003679121.1	InterPro IPR001845:IPR011991; KEGG: sen:SACE_3779 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: C1YTM5 transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family
YP_003679122.1	COGs: COG0287 prephenate dehydrogenase; InterPro IPR003099:IPR016040; KEGG: cai:Caci_2462 prephenate dehydrogenase; PFAM: prephenate dehydrogenase; SPTR: C1YTM4 prephenate dehydrogenase; PFAM: prephenate dehydrogenase
YP_003679123.1	COGs: COG4401 chorismate mutase; InterPro IPR008243:IPR013813; KEGG: cai:Caci_2461 chorismate mutase; PFAM: chorismate mutase of the AroH class; SPTR: C1YTM3 chorismate mutase; TIGRFAM: chorismate mutase; PFAM: chorismate mutase type I; TIGRFAM: monofunctional chorismate mutase, gram positive type, clade 1
YP_003679124.1	COGs: COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR002480; KEGG: sma:SAV_6086 2-dehydro-3-deoxyphosphoheptonate aldolase; PFAM: DAHP synthetase class II; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: C1YTM2 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: class-II DAHP synthetase family; TIGRFAM: 3-deoxy-7-phosphoheptulonate synthase, class II
YP_003679125.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: sro:Sros_4500 major facilitator superfamily transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YTM1 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003679126.1	InterPro IPR001647:IPR012287:IPR011075:IPR009057; KEGG: sro:Sros_4501  TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YTM0 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003679127.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: azc:AZC_4570  short-chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YTL9  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003679128.1	COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR011051:IPR013096:IPR014710; KEGG: fal:FRAAL4637 hypothetical protein; PFAM: cupin; SPTR: C1YTL8 Cupin; PFAM: Cupin domain
YP_003679129.1	COGs: COG0223 Methionyl-tRNA formyltransferase; InterPro IPR002376:IPR005793:IPR011034; KEGG: bcr:BCAH187_A5268 methionyl-tRNA formyltransferase; PFAM: formyl transferase; SPTR: C1YTL7 Methionyl-tRNA formyltransferase; PFAM: Formyl transferase; Formyl transferase, C-terminal domain
YP_003679130.1	COGs: COG1960 acyl-CoA dehydrogenase; InterProIPR013786:IPR009100:IPR009075:IPR013107:IPR 006092:IPR013764; KEGG: mtc:MT3178 hypothetical protein; PFAM: acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; SPTR: C1YTL6 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, N-terminal domain
YP_003679131.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR006094:IPR016166:IPR016164:IPR016167:IPR 016168:IPR016170; KEGG: plu:plu0950 hypothetical protein; PFAM: FAD linked oxidase domain protein; SPTR: C1YTL5 FAD/FMN-dependent dehydrogenase; PFAM: FAD binding domain
YP_003679132.1	COGs: COG4401 chorismate mutase; InterPro IPR008243:IPR013813; KEGG: tcu:Tcur_2829 chorismate mutase; PFAM: chorismate mutase of the AroH class; SPTR: C1YTL4 Monofunctional chorismate mutase, clade 1; TIGRFAM: chorismate mutase; PFAM: chorismate mutase type I; TIGRFAM: monofunctional chorismate mutase, gram positive type, clade 1
YP_003679133.1	COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR009002:IPR012349:IPR002563; KEGG: rxy:Rxyl_0953 flavin reductase-like, FMN-binding protein; PFAM: flavin reductase domain protein FMN-binding; SMART: flavin reductase domain protein FMN-binding; SPTR: C1YTL3 Conserved protein of DIM6/NTAB family, COG1853; PFAM: Flavin reductase like domain
YP_003679134.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: sen:SACE_3934 oxidoreductase; PFAM: aldo/keto reductase; SPTR: C1YTL2 Predicted oxidoreductase similar to aryl-alcohol dehydrogenase; PFAM: Aldo/keto reductase family
YP_003679135.1	InterPro IPR004360; KEGG: sro:Sros_9281 hypothetical protein; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YTL1 Lactoylglutathione lyase family protein; PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003679136.1	COGs: COG1926 phosphoribosyltransferase; InterPro IPR000836; KEGG: svi:Svir_15350 predicted phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: C1YTL0 Predicted phosphoribosyltransferase; PFAM: phosphoribosyl transferase domain
YP_003679137.1	KEGG: sen:SACE_6309 dienelactone hydrolase; SPTR: C1YTK9 Dienelactone hydrolase-like enzyme; PFAM: Dienelactone hydrolase family
YP_003679138.1	COGs: COG2312 Erythromycin esterase homolog; InterPro IPR014622:IPR007815; KEGG: saq:Sare_4043 erythromycin esterase; PFAM: Erythromycin esterase; SPTR: C1YTK8 Erythromycin esterase-like enzyme; PFAM: Erythromycin esterase
YP_003679139.1	COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: rop:ROP_49970 gluconate permease; PFAM: gluconate transporter; SPTR: C1YTK7 H+/gluconate symporter family protein; PFAM: GntP family permease
YP_003679140.1	COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: sco:SCO3130 dehydratase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: C1YTK6 Predicted acyl-CoA transferase/carnitine dehydratase; PFAM: CoA-transferase family III
YP_003679141.1	COGs: COG2301 citrate lyase subunit beta; InterPro IPR015813:IPR005000:IPR011206; KEGG: rme:Rmet_3835 HpcH/HpaI aldolase; PFAM: HpcH/HpaI aldolase; SPTR: C1YTK5 citrate lyase subunit beta; PFAM: HpcH/HpaI aldolase/citrate lyase family
YP_003679142.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: bam:Bamb_6272 LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: C1YTK4 transcriptional regulator, COG0583; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_003679143.1	KEGG: Jag1; jagged 1; K06052 jagged; SPTR: C1YTK3  uncharacterized protein
YP_003679144.1	KEGG: dge:Dgeo_2634 CRISPR-associated CSE3 family protein; SPTR: C1YTK2  uncharacterized protein; PFAM: CRISPR associated protein
YP_003679145.1	COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterProIPR000943:IPR014322:IPR014284:IPR007627:IPR 007624:IPR007630:IPR013325:IPR013324:IPR011991; KEGG: tfu:Tfu_1334 RNA polymerase sigma factor; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; SPTR: C1YTK1 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily
YP_003679146.1	KEGG: mgm:Mmc1_2179  outer membrane adhesin like protein; SPTR: C1YTJ9  uncharacterized protein
YP_003679147.1	KEGG: scl:sce7729  oxidoreductase; SPTR: C1YTJ8  uncharacterized protein
YP_003679148.1	KEGG: cai:Caci_8485 hypothetical protein; SPTR: C1YTJ7  uncharacterized protein
YP_003679149.1	KEGG: GA27442 gene product from transcript GA27442-RA; SPTR: C1YTJ6  uncharacterized protein
YP_003679150.1	COGs: COG5271 ATPase AAA containing von Willebrand factor type A (vWA) domain; KEGG: hypothetical protein; SPTR: C1YTJ5  uncharacterized protein
YP_003679151.1	InterPro IPR010310; KEGG: bde:BDP_1574 GlnD [protein-PII] uridylyltransferase; PFAM: protein of unknown function DUF909; SPTR: C1YTJ4 WXG repeat protein; PFAM: proteins of 100 residues with WXG
YP_003679152.1	KEGG: fal:FRAAL2962 hypothetical protein; SPTR: C1YTJ3  uncharacterized protein
YP_003679153.1	InterPro IPR007795:IPR000209; KEGG: sgr:SGR_6352 hypothetical protein; PFAM: protein of unknown function DUF690; SPTR: C1YTJ2  uncharacterized protein; PFAM: protein of unknown function (DUF690)
YP_003679154.1	InterPro IPR006707; KEGG: sen:SACE_5517 integral membrane protein; PFAM: protein of unknown function DUF571; SPTR: C1YTJ1 Secretion protein snm4; TIGRFAM: secretion protein snm4; PFAM: protein of unknown function (DUF571); TIGRFAM: secretion protein snm4
YP_003679155.1	COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR003593:IPR002543:IPR000740; KEGG: sgr:SGR_6350  FtsK/SpoIIIE family protein; PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase AAA; SPTR: C1YTJ0 DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: FtsK/SpoIIIE family
YP_003679156.1	InterPro IPR000209; KEGG: sgr:SGR_6349  secreted subtilisin-like serine protease; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: C1YTI9 Subtilisin-like serine protease; PFAM: Subtilase family
YP_003679157.1	KEGG: sma:SAV_5326 hypothetical protein; SPTR: C1YTI8  uncharacterized protein
YP_003679158.1	KEGG: GA28568 gene product from transcript GA28568-RA; SPTR: C1YTI7  uncharacterized protein
YP_003679159.1	InterPro IPR006118; KEGG: hypothetical protein; SPTR: C1YTI6  uncharacterized protein
YP_003679160.1	KEGG: GA28568 gene product from transcript GA28568-RA; SPTR: C1YTI6  uncharacterized protein
YP_003679161.1	SPTR: C1YTI5  uncharacterized protein
YP_003679162.1	KEGG: ote:Oter_1689 cell wall surface anchor family protein; SPTR: C1YUC1  uncharacterized protein; PFAM: phosphatidylinositol 3- and 4-kinase
YP_003679163.1	COGs: COG1349 transcriptional regulators of sugar metabolism; InterPro IPR014036; KEGG: ami:Amir_1059 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SPTR: C1YUB9 transcriptional regulator of sugar metabolism; PFAM: Bacterial regulatory proteins, deoR family
YP_003679164.1	KEGG: fre:Franean1_2598 hypothetical protein; SPTR: C1YUB8  uncharacterized protein
YP_003679165.1	KEGG: fra:Francci3_1784 hypothetical protein; SPTR: C1YUB7  uncharacterized protein
YP_003679166.1	InterPro IPR013974; KEGG: fra:Francci3_1738 hypothetical protein; PFAM: SAF domain protein; SPTR: C1YUB6 SAF domain-containing protein; PFAM: SAF domain
YP_003679167.1	KEGG: cai:Caci_4030 hypothetical protein; SPTR: C1YUB5  uncharacterized protein
YP_003679168.1	COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR001482; KEGG: fra:Francci3_1736 type II secretion system protein E; PFAM: type II secretion system protein E; SPTR: C1YUB4 Flp pilus assembly protein, ATPase CpaF; PFAM: type II/IV secretion system protein
YP_003679169.1	InterPro IPR018076; KEGG: fra:Francci3_1735  integral membrane protein; PFAM: type II secretion system F domain; SPTR: C1YUB3 Flp pilus assembly protein TadB
YP_003679170.1	InterPro IPR018076; KEGG: cai:Caci_4033 type II secretion system protein; PFAM: type II secretion system F domain; SPTR: C7QG56 type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain
YP_003679171.1	KEGG: bgl:bglu_1g21950 hypothetical protein; SPTR: C1YUB1  uncharacterized protein
YP_003679172.1	KEGG: nca:Noca_4722 hypothetical protein; SPTR: C1YUB0  uncharacterized protein
YP_003679173.1	InterPro IPR012495; KEGG: cai:Caci_4037 TadE family protein; PFAM: TadE family protein; SPTR: C1YUA9 TadE-like protein; PFAM: TadE-like protein
YP_003679174.1	KEGG: fra:Francci3_1731 hypothetical protein; SPTR: C1YUA8  uncharacterized protein; PFAM: TadE-like protein
YP_003679175.1	COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665:IPR006664; KEGG: hypothetical protein; PFAM: OmpA/MotB domain protein; SPTR: C1YUA7 Outer membrane protein/peptidoglycan-associated (Lipo)protein; PFAM: OmpA family
YP_003679176.1	COGs: COG0435 glutathione S-transferase; InterProIPR010987:IPR017933:IPR012336:IPR004046:IPR 016639; KEGG: sma:SAV_7463 glutathione S-transferase; PFAM: glutathione S-transferase domain; PRIAM: glutathione transferase; SPTR: C1YUA6 Predicted glutathione S-transferase; PFAM: glutathione S-transferase, C-terminal domain
YP_003679177.1	COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR002938:IPR003042; KEGG: mmi:MMAR_2627 hypothetical protein; PFAM: monooxygenase FAD-binding; SPTR: C1YUA5 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain
YP_003679178.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: mab:MAB_4757 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YUA4 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003679179.1	COGs: COG0294 dihydropteroate synthase; InterPro IPR000489:IPR006390:IPR011005; KEGG: tfu:Tfu_1314 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; PRIAM: dihydropteroate synthase; SPTR: C1YUA3 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase
YP_003679180.1	InterPro IPR004183; KEGG: tfu:Tfu_1315 hypothetical protein; SPTR: C1YUA2  uncharacterized protein
YP_003679181.1	COGs: COG1985 Pyrimidine reductase riboflavin biosynthesis; InterPro IPR002734; KEGG: tfu:Tfu_1316 hypothetical protein; PFAM: bifunctional deaminase-reductase domain protein; SPTR: C1YUA1 Pyrimidine reductase, riboflavin biosynthesis; PFAM: RibD C-terminal domain
YP_003679182.1	InterPro IPR001647:IPR012287:IPR009057:IPR011075; KEGG: fal:FRAAL0357 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YUA0 transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003679183.1	COGs: COG2339 membrane protein; KEGG: vap:Vapar_3987 membrane protein-like protein; SPTR: C1YU99 Predicted membrane protein, COG2339
YP_003679184.1	KEGG: KLTH0F01518p; SPTR: C1YU98  uncharacterized protein
YP_003679185.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: tcu:Tcur_4662 beta-lactamase; SPTR: C1YU97 Zn-dependent hydrolase, glyoxylase; PFAM: metallo-beta-lactamase superfamily
YP_003679186.1	InterPro IPR006311:IPR011047:IPR018391; KEGG: tfu:Tfu_1441 pyrrolo-quinoline quinone; SPTR: C1YU96  uncharacterized protein
YP_003679187.1	InterPro IPR010872; KEGG: mmi:MMAR_2829 hypothetical protein; PFAM: protein of unknown function DUF1503; SPTR: C1YU95  uncharacterized protein; PFAM: MDMPI C-terminal domain
YP_003679188.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: sco:SCO3773 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: C1YU94 LysR family transcriptional regulator; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_003679189.1	COGs: COG1024 enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: bph:Bphy_7065 enoyl-CoA hydratase/isomerase; PFAM: enoyl-CoA hydratase/isomerase; SPTR: C1YU93 enoyl-CoA hydratase/carnithine racemase; PFAM: enoyl-CoA hydratase/isomerase family
YP_003679190.1	COGs: COG0365 acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR020845:IPR000873; KEGG: rpe:RPE_4586 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YU92 acyl-CoA synthetase/AMP-acid ligase; PFAM: AMP-binding enzyme
YP_003679191.1	InterPro IPR005829:IPR016196:IPR005828; KEGG: rxy:Rxyl_0464 general substrate transporter; PFAM: general substrate transporter; SPTR: C1YU91 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003679192.1	KEGG: sgr:SGR_4659  phosphotransferase; SPTR: B1VVX7  phosphotransferase
YP_003679193.1	KEGG: sco:SCO0850 membrane protein; SPTR: C1YU88  uncharacterized protein
YP_003679194.1	COGs: COG1597 Sphingosine kinase; InterPro IPR001206:IPR016118:IPR000326; KEGG: sro:Sros_3215 sphingosine kinase-like protein; PFAM: phosphoesterase PA-phosphatase related; diacylglycerol kinase catalytic region; SMART: phosphoesterase PA-phosphatase related; diacylglycerol kinase; SPTR: C1YU87 Sphingosine/diacylglycerol kinase-like enzyme; PFAM: diacylglycerol kinase catalytic domain; PAP2 superfamily
YP_003679195.1	COGs: COG2907 NAD/FAD-binding protein; InterPro IPR002937; KEGG: sgr:SGR_5877  amine oxidoreductase; PFAM: amine oxidase; SPTR: C1YU86 Predicted NAD/FAD-binding protein; PFAM: Flavin containing amine oxidoreductase
YP_003679196.1	COGs: COG3496 conserved hypothetical protein; InterPro IPR010775; KEGG: rha:RHA1_ro02558 hypothetical protein; PFAM: protein of unknown function DUF1365; SPTR: C1YU85 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF1365)
YP_003679197.1	COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR003333; KEGG: sgr:SGR_5879  cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; PRIAM: Cyclopropane-fatty-acyl-phospholipid synthase; SPTR: C1YU84 methyltransferase, cyclopropane fatty acid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_003679198.1	COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR003333; KEGG: sgr:SGR_5880  cyclopropane fatty acid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; PRIAM: Cyclopropane-fatty-acyl-phospholipid synthase; SPTR: C1YU83 methyltransferase, cyclopropane fatty acid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_003679199.1	COGs: COG3752 membrane protein; InterPro IPR010721:IPR001104; KEGG: sgr:SGR_5881 hypothetical protein; PFAM: protein of unknown function DUF1295; SPTR: C1YU82 Predicted membrane protein, COG3752; PFAM: protein of unknown function (DUF1295)
YP_003679200.1	COGs: COG1064 Zn-dependent alcohol dehydrogenase; InterProIPR013149:IPR016040:IPR011032:IPR002328:IPR 013154; KEGG: ach:Achl_1768 alcohol dehydrogenase GroES domain protein; PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; SPTR: C1YU81 Zn-dependent alcohol dehydrogenase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003679201.1	InterPro IPR010427; KEGG: rer:RER_19550 hypothetical protein; PFAM: protein of unknown function DUF1023; SPTR: C1YU80  uncharacterized protein; PFAM: alpha/beta hydrolase of unknown function (DUF1023)
YP_003679202.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR017871:IPR005894:IPR003439:IPR003593; KEGG: sgr:SGR_3118  ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YU79 Daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase; PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit
YP_003679203.1	InterPro IPR000412:IPR013525; KEGG: sgr:SGR_3117  ABC transporter permease; PFAM: ABC transporter; SPTR: C1YU78 ABC-type multidrug transporter permease; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family
YP_003679204.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR017909:IPR011701:IPR001958:IPR016196; KEGG: sen:SACE_1157 proton antiporter efflux pump; PFAM: major facilitator superfamily MFS_1; SPTR: C1YU77 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003679205.1	KEGG: rop:ROP_07790 hypothetical protein; SPTR: C1YU76  uncharacterized protein
YP_003679206.1	InterPro IPR004360; KEGG: afw:Anae109_3157 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YU75 glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003679207.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR000838:IPR014305:IPR014284:IPR013325:IPR 013324:IPR007627:IPR013249:IPR002075; KEGG: rha:RHA1_ro05361 RNA polymerase factor sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; nuclear transport factor 2; SPTR: C1YU74 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; Nuclear transport factor 2 (NTF2) domain; TIGRFAM: RNA polymerase sigma-70 factor, TIGR02960 family; RNA polymerase sigma factor, sigma-70 family
YP_003679208.1	COGs: COG1278 Cold shock protein; InterProIPR011129:IPR012156:IPR002059:IPR012340:IPR 016027:IPR019844; KEGG: saq:Sare_3353 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: C1YU73 Cold-shock DNA-binding protein family; PFAM: 'Cold-shock' DNA-binding domain
YP_003679209.1	COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR014021:IPR001650:IPR014014:IPR014001:IPR 011545; KEGG: sma:SAV_4155 ATP-dependent RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase; SMART: DEAD-like helicase ; helicase domain protein; SPTR: C1YU72 DNA/RNA helicase, superfamily II (Fragment); PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_003679210.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR009061; KEGG: sen:SACE_4775 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YVR5 Predicted transcriptional regulator; PFAM: MerR family regulatory protein
YP_003679211.1	COGs: COG1506 dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011042:IPR001375; KEGG: mva:Mvan_5922 peptidase S9 prolyl oligopeptidase; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; SPTR: C1YVR4 dipeptidyl aminopeptidase/acylaminoacyl peptidase; PFAM: prolyl oligopeptidase family
YP_003679212.1	COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: sro:Sros_3542 hypothetical protein; PFAM: protein of unknown function DUF323; SPTR: C1YVR3 Uncharacterized conserved protein; PFAM: Formylglycine-generating sulfatase enzyme
YP_003679213.1	KEGG: tfu:Tfu_1352 hypothetical protein; SPTR: C1YVR2  uncharacterized protein
YP_003679214.1	COGs: COG2518 protein-L-isoaspartate carboxylmethyltransferase; InterPro IPR000682; KEGG: tcu:Tcur_3764 protein-L-isoaspartate(D-aspartate)O-methyltrans ferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: C1YVR1 protein-L-isoaspartate carboxylmethyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_003679215.1	KEGG: tfu:Tfu_1244 helix-hairpin-helix DNA-binding motif-containing protein; SPTR: C1YVR0  uncharacterized protein
YP_003679216.1	KEGG: tfu:Tfu_1245 hypothetical protein; SPTR: C1YVQ9  uncharacterized protein
YP_003679217.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: nfa:nfa29590  transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YVQ8 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003679218.1	COGs: COG2267 lysophospholipase; InterPro IPR000073; KEGG: nfa:nfa29640 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: C1YVQ7 lysophospholipase; PFAM:  lysophospholipase
YP_003679219.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: sro:Sros_3694 ab hydrolase, alpha/beta hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YVQ6 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003679220.1	InterPro IPR004360; KEGG: mes:Meso_2056 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YVQ5 glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003679221.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: rlg:Rleg_2636 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YVQ4 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003679222.1	COGs: COG1132 ABC-type multidrug transporter ATPase and permeases; InterPro IPR003439:IPR011527:IPR003593; KEGG: sma:SAV_868 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YVQ3 ABC-type multidrug transporter ATPase and permease; PFAM: ABC transporter
YP_003679223.1	COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003439:IPR017940:IPR011527:IPR003593; KEGG: cai:Caci_5807 ABC transporter related; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YVQ2 ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain; PFAM: ABC transporter
YP_003679224.1	InterPro IPR013217; KEGG: stp:Strop_0255 methyltransferase type 12; PFAM: methyltransferase type 12; SPTR: C1YVQ1 methyltransferase family protein; PFAM: methyltransferase domain
YP_003679225.1	InterPro IPR013381; KEGG: tfu:Tfu_1600 CRISPR-associated CSE1 family protein; PFAM: CRISPR-associated protein Cse1; SPTR: C1YVQ0 CRISPR-associated protein, Cse1 family; TIGRFAM: CRISPR-associated protein, Cse1 family; PFAM: CRISPR-associated protein Cse1 (CRISPR_cse1); TIGRFAM: CRISPR-associated protein, Cse1 family
YP_003679226.1	InterPro IPR013382; KEGG: tfu:Tfu_1599 CRISPR-associated CSE2 family protein; PFAM: CRISPR-associated protein Cse2; SPTR: C1YVP9 CRISPR-associated protein, Cse2 family; TIGRFAM: CRISPR-associated protein, Cse2 family; PFAM: CRISPR-associated protein Cse2 (CRISPR_cse2); TIGRFAM: CRISPR-associated protein, Cse2 family
YP_003679227.1	InterPro IPR010148; KEGG: tfu:Tfu_1598 CRISPR-associated CSE4 family protein; PFAM: CRISPR-associated protein CT1975; SPTR: C1YVP8 CRISPR-associated protein, Cse4 family; TIGRFAM: CRISPR-associated protein, Cse4 family; PFAM: CT1975-like protein; TIGRFAM: CRISPR-associated protein, Cse4 family
YP_003679228.1	InterPro IPR010147:IPR013422; KEGG: tfu:Tfu_1597 CRISPR-associated Cas5e family protein; PFAM: CRISPR-associated protein CT1976; SPTR: C1YVP7 CRISPR-associated protein, Cas5e family; TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, N-terminal domain; CRISPR-associated protein Cas5, Ecoli subtype
YP_003679229.1	InterPro IPR010179; KEGG: tcu:Tcur_2684 CRISPR-associated protein, CSE3 family; PFAM: CRISPR-associated protein CT1974; SPTR: C1YVP6 CRISPR-associated protein, Cse3 family; TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR associated protein; TIGRFAM: CRISPR-associated protein, Cse3 family
YP_003679230.1	COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR019851:IPR002729; KEGG: sgr:SGR_3547  CRISPR-associated Cas1 family protein; PFAM: protein of unknown function DUF48; SPTR: C1YVP5 CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1; PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1; CRISPR-associated protein Cas1, ECOLI subtype
YP_003679231.1	InterPro IPR010152; KEGG: tcu:Tcur_2686 CRISPR-associated protein Cas2; PFAM: CRISPR-associated protein Cas2; SPTR: C1YVP4 CRISPR-associated protein Cas2; TIGRFAM: CRISPR-associated protein Cas2; PFAM: CRISPR-associated protein (Cas_Cas2CT1978); TIGRFAM: CRISPR-associated protein Cas2, E. coli subfamily
YP_003679232.1	KEGG: sen:SACE_3891 hypothetical protein; SPTR: C1YVP3  uncharacterized protein
YP_003679233.1	KEGG: art:Arth_1780 transposase; SPTR: B4UYG5 transposase and inactivated derivatives
YP_003679234.1	COGs: COG2518 protein-L-isoaspartate carboxylmethyltransferase; InterPro IPR000682; KEGG: tcu:Tcur_3764 protein-L-isoaspartate(D-aspartate)O-methyltrans ferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; PRIAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: C1YVP2 protein-L-isoaspartate carboxylmethyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_003679235.1	KEGG: tcu:Tcur_3626 hypothetical protein
YP_003679236.1	KEGG: fal:FRAAL6349 hypothetical protein; SPTR: C1YVP1  uncharacterized protein
YP_003679237.1	KEGG: fal:FRAAL6348 hypothetical protein; SPTR: C1YVP0  uncharacterized protein
YP_003679238.1	InterPro IPR001387:IPR010982; KEGG: fal:FRAAL6347  regulatory protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YRR3  uncharacterized protein; PFAM: Helix-turn-helix
YP_003679239.1	InterPro IPR007278; KEGG: tfu:Tfu_0708 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YRR2  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003679240.1	InterPro IPR001387:IPR010982; KEGG: tfu:Tfu_0974 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YRR1  uncharacterized protein; PFAM: Helix-turn-helix
YP_003679241.1	KEGG: tfu:Tfu_2295 hypothetical protein; SPTR: C1YRR0  uncharacterized protein
YP_003679242.1	COGs: COG0515 serine/threonine protein kinase; InterPro IPR008271:IPR011009:IPR017442:IPR000719; KEGG: fra:Francci3_2875 serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SPTR: C1YRQ9 protein kinase family protein; PFAM: protein kinase domain
YP_003679243.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR017441:IPR008271:IPR000719:IPR011009:IPR 020635:IPR002290:IPR017442; KEGG: tfu:Tfu_2375 tyrosine protein kinase:serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: C1YRQ8 protein kinase family protein; PFAM: protein kinase domain
YP_003679244.1	KEGG: sro:Sros_2288 hypothetical protein; SPTR: C1YRQ7  uncharacterized protein
YP_003679245.1	COGs: COG1846 transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: fre:Franean1_3111 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YRQ6 transcriptional regulator; PFAM: MarR family
YP_003679246.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: fre:Franean1_3110 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YR53  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003679247.1	InterPro IPR009057; KEGG: gbr:Gbro_2921  transposase; SPTR: C1YRQ4  uncharacterized protein
YP_003679248.1	KEGG: fal:FRAAL5032 hypothetical protein; SPTR: C1YRQ3  uncharacterized protein
YP_003679249.1	InterPro IPR011024; KEGG: aau:AAur_3198 hypothetical protein; SPTR: C1YRQ2  uncharacterized protein
YP_003679250.1	InterPro IPR011047:IPR011044; KEGG: tfu:Tfu_1441 pyrrolo-quinoline quinone; SPTR: C1YRQ1  uncharacterized protein
YP_003679251.1	InterPro IPR011047:IPR018391; KEGG: sus:acid_1149 pyrrolo-quinoline quinone; SPTR: C1YRQ0  uncharacterized protein
YP_003679252.1	COGs: COG2518 protein-L-isoaspartate carboxylmethyltransferase; InterPro IPR000682; KEGG: fre:Franean1_2627 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; PRIAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: C1YRP9 protein-L-isoaspartate carboxylmethyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_003679253.1	InterPro IPR008925:IPR020751; KEGG: tfu:Tfu_0623 glutamyl-tRNA synthetase; SPTR: C1YRP8  uncharacterized protein
YP_003679254.1	COGs: COG0657 esterase/lipase; InterPro IPR013094; KEGG: fal:FRAAL2259  carboxylesterase/lipase; PFAM: alpha/beta hydrolase; SPTR: C1YRP7 esterase/lipase; PFAM: alpha/beta hydrolase fold
YP_003679255.1	KEGG: mdi:METDI4819 hypothetical protein; SPTR: C1YRP6  uncharacterized protein
YP_003679256.1	InterPro IPR002525; KEGG: sco:SCO6400 IS117 transposase; PFAM: transposase IS111A/IS1328/IS1533; SPTR: C1YRP5 transposase; PFAM: transposase
YP_003679257.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: ara:Arad_0495 hydrolase protein; PFAM: alpha/beta hydrolase fold; SPTR: C1YRP4 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003679258.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395:IPR020471; KEGG: cai:Caci_5769 aldo/keto reductase; PFAM: aldo/keto reductase; SPTR: C1YRP2 Predicted oxidoreductase similar to aryl-alcohol dehydrogenase; PFAM: Aldo/keto reductase family
YP_003679259.1	COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: nfa:nfa29560  transcriptional regulator; PFAM: helix-turn-helix HxlR type; SPTR: C1YRP1 Predicted transcriptional regulator; PFAM: HxlR-like helix-turn-helix
YP_003679260.1	COGs: COG0020 undecaprenyl pyrophosphate synthase; InterPro IPR001441:IPR008949:IPR002060:IPR018520; KEGG: sco:SCP1.212  bifunctional undecaprenyl pyrophosphate synthetase/phytoene synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; Squalene/phytoene synthase; SPTR: C1YRN9 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM:  undecaprenyl diphosphate synthase; Squalene/phytoene synthase; TIGRFAM: undecaprenyl diphosphate synthase
YP_003679261.1	KEGG: spe:Spro_2105 hypothetical protein; SPTR: C1YRN6  uncharacterized protein
YP_003679262.1	COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR005863:IPR013221:IPR004101:IPR000713; KEGG: sma:SAV_6118 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate- D-alanyl-D -alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: C1YRN5 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-d iaminopimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
YP_003679263.1	COGs: COG3173 aminoglycoside phosphotransferase; InterPro IPR011009:IPR002575; KEGG: fal:FRAAL3884  aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: C1YRN4 Predicted aminoglycoside phosphotransferase; PFAM: phosphotransferase enzyme family
YP_003679264.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: sro:Sros_2001  short-chain alcohol dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YRN3  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003679265.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sen:SACE_6254 hypothetical protein; PFAM: regulatory protein TetR; SPTR: C1YRN2 transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003679266.1	KEGG: sro:Sros_8664 hypothetical protein; SPTR: C1YRN1  uncharacterized protein
YP_003679267.1	InterPro IPR003610:IPR016283:IPR000726; KEGG: sgr:SGR_3400 chitinase C; PFAM: glycoside hydrolase family 19; carbohydrate-binding family V/XII; PRIAM: chitinase; SMART: carbohydrate-binding family V/XII; SPTR: C1YRN0 Predicted chitinase; PFAM: chitinase class I; carbohydrate binding domain
YP_003679268.1	COGs: COG2226 methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: sma:SAV_664 methyltransferase; PFAM: methyltransferase type 11; SPTR: C1YRM9 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain
YP_003679269.1	KEGG: sml:Smlt0194 hypothetical protein; SPTR: C1YRM8  uncharacterized protein
YP_003679270.1	KEGG: xau:Xaut_2302 SMC domain-containing protein; SPTR: A7IHQ2 SMC domain protein
YP_003679271.1	InterPro IPR001387; KEGG: sco:SCO0233 DNA-binding protein; SMART: helix-turn-helix domain protein; SPTR: C1YRM7  uncharacterized protein; PFAM: Helix-turn-helix
YP_003679272.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002198:IPR002347; KEGG: sco:SCO0235 short chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YRM6  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003679273.1	COGs: COG2271 Sugar phosphate permease; InterPro IPR016196:IPR011701; KEGG: pol:Bpro_2062 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YRM5 Sugar phosphate permease; PFAM: Major Facilitator Superfamily
YP_003679274.1	KEGG: reh:H16_A3217 hypothetical protein; SPTR: C1YRM4  uncharacterized protein
YP_003679275.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016161:IPR015590:IPR016160:IPR016162; KEGG: dra:DR_A0126 aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase; PRIAM: aldehyde dehydrogenase (NAD(+)); SPTR: C1YRM3 NAD-dependent aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase family
YP_003679276.1	COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: vha:VIBHAR_03056 hypothetical protein; PFAM: BCCT transporter; SPTR: C1YRM2 Choline/carnitine/betaine transport; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport
YP_003679277.1	InterProIPR001387:IPR001647:IPR012287:IPR009057:IPR 010982:IPR011075; KEGG: sen:SACE_3864 TetR family transcriptional regulator; PFAM: regulatory protein TetR; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YRM1 transcriptional regulator, COG1309; PFAM: Helix-turn-helix; Bacterial regulatory proteins, tetR family
YP_003679278.1	COGs: COG3246 conserved hypothetical protein; InterPro IPR008567; KEGG: sgr:SGR_6650 hypothetical protein; PFAM: protein of unknown function DUF849; SPTR: C1YRM0 Uncharacterized conserved protein; PFAM: Prokaryotic protein of unknown function (DUF849)
YP_003679279.1	COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR016040:IPR008927:IPR006108:IPR006176; KEGG: sen:SACE_3866  3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: C1YRL9 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YP_003679280.1	COGs: COG0824 thioesterase; InterPro IPR006683; KEGG: sen:SACE_3867 thioesterase-like protein; PFAM: thioesterase superfamily protein; SPTR: C1YRL8 Predicted thioesterase; PFAM: thioesterase
YP_003679281.1	KEGG: rci:RCIX48 hypothetical protein; SPTR: C1YRL7  uncharacterized protein
YP_003679282.1	KEGG: ami:Amir_4230 hypothetical protein; SPTR: C1YRL6  uncharacterized protein
YP_003679283.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR009061; KEGG: ami:Amir_4229 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YRL5 Predicted transcriptional regulator; PFAM: MerR family regulatory protein
YP_003679284.1	COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR002657; KEGG: tfu:Tfu_1569 arsenite efflux pump; PFAM: sodium symporter; SPTR: C1YRL4 Arsenite efflux pump ACR3-like permease; PFAM: Sodium Bile acid symporter family
YP_003679285.1	COGs: COG0785 cytochrome C biogenesis protein; InterPro IPR003834; KEGG: tfu:Tfu_1522 cytochrome C biogenesis protein; PFAM: cytochrome c biogenesis protein transmembrane region; SPTR: C1YRL3 cytochrome C biogenesis protein; PFAM: cytochrome C biogenesis protein transmembrane region
YP_003679286.1	COGs: COG1651 protein-disulfide isomerase; InterProIPR017937:IPR017936:IPR012335:IPR012336:IPR 001853; KEGG: sco:SCO5993 hypothetical protein; PFAM: DSBA oxidoreductase; SPTR: C1YRL2 protein-disulfide isomerase; PFAM: DSBA-like thioredoxin domain
YP_003679287.1	InterPro IPR001915; KEGG: mgi:Mflv_2815 peptidase M48, Ste24p; PFAM: peptidase M48 Ste24p; SPTR: C1YRL1 Zn-dependent protease with chaperone function; PFAM: peptidase family M48
YP_003679288.1	COGs: COG3682 transcriptional regulator protein; InterPro IPR011991:IPR005650; KEGG: sen:SACE_0615 CopY family transcriptional regulator; PFAM: Penicillinase repressor; SPTR: C1YRL0 Predicted transcriptional regulator, COG3682; PFAM: Penicillinase repressor
YP_003679289.1	InterPro IPR002372; KEGG: bfa:Bfae_24690 hypothetical protein; PFAM: pyrrolo-quinoline quinone; SPTR: C1YRK9 PQQ enzyme repeat-containing protein
YP_003679290.1	COGs: COG1651 protein-disulfide isomerase; InterPro IPR012335:IPR012336:IPR001853; KEGG: sgr:SGR_1265 hypothetical protein; PFAM: DSBA oxidoreductase; SPTR: C1YRK8 protein-disulfide isomerase; PFAM: DSBA-like thioredoxin domain
YP_003679291.1	COGs: COG0665 glycine/D-amino acid oxidase (deaminating); InterPro IPR017941:IPR006076:IPR005805; KEGG: cef:CE2887 hypothetical protein; PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; SPTR: C1YRK7 glycine/D-amino acid oxidase deaminating; PFAM: Rieske [2Fe-2S] domain; FAD dependent oxidoreductase
YP_003679292.1	InterPro IPR000182:IPR016181; KEGG: ami:Amir_3305 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YRK6 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003679293.1	KEGG: tfu:Tfu_0103 hypothetical protein; SPTR: C1YRK5  uncharacterized protein
YP_003679294.1	KEGG: pfl:PFL_0456 major facilitator family transporter; SPTR: C1YRK4  uncharacterized protein
YP_003679295.1	InterPro IPR009002:IPR019920:IPR011576; KEGG: sco:SCO4026 ATP binding protein; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: C1YRK3 pyridoxamine 5'-phosphate oxidase; TIGRFAM:  F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme
YP_003679296.1	KEGG: RBM12B; RNA binding motif protein 12B; SPTR: C1YRK2  uncharacterized protein
YP_003679297.1	InterPro IPR005560; KEGG: tfu:Tfu_1443 hypothetical protein; PFAM: protein of unknown function DUF326; SPTR: C1YRK1  uncharacterized protein
YP_003679298.1	InterPro IPR001128; KEGG: sen:SACE_2090 cytochrome P450 monooxygenase; SPTR: C1YRK0 cytochrome P450; PFAM: cytochrome P450
YP_003679299.1	COGs: COG2936 acyl esterase; InterPro IPR005674:IPR008979:IPR000383:IPR013736; KEGG: sen:SACE_4152 peptidase S15; PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; SPTR: C1YRJ9  hydrolase, CocE/NonD family; TIGRFAM: hydrolase CocE/NonD family protein; PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM:  hydrolase, CocE/NonD family
YP_003679300.1	InterPro IPR011761; KEGG: svi:Svir_08450 hypothetical protein; SPTR: C1YRJ8  uncharacterized protein; PFAM: carbamoyl-phosphate synthase L chain, ATP binding domain
YP_003679301.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: ami:Amir_6178 aldo/keto reductase; PFAM: aldo/keto reductase; SPTR: C1YRJ6 Predicted oxidoreductase similar to aryl-alcohol dehydrogenase; PFAM: Aldo/keto reductase family
YP_003679302.1	KEGG: tfu:Tfu_1754 hypothetical protein; SPTR: C1YRJ5  uncharacterized protein
YP_003679303.1	COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR016040:IPR002347:IPR002198; KEGG: tfu:Tfu_0888 ketoacyl reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YRJ4  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003679304.1	COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR019945:IPR011251:IPR016048; KEGG: tfu:Tfu_1669 hypothetical protein; PFAM: Luciferase-like, subgroup; SPTR: C1YRJ3 Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; TIGRFAM: F420-dependent oxidoreductase, G6PDH family; PFAM: Luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase, G6PDH family
YP_003679305.1	KEGG: fal:FRAAL0702 hypothetical protein; SPTR: C1YRJ2  uncharacterized protein
YP_003679306.1	InterProIPR018087:IPR013781:IPR017853:IPR003610:IPR 001547; KEGG: tfu:Tfu_0901 cellulase; PFAM: glycoside hydrolase family 5; carbohydrate-binding family V/XII; PRIAM: cellulase; SMART: carbohydrate-binding family V/XII; SPTR: C1YRJ1 endoglucanase; PFAM: cellulase (glycosyl hydrolase family 5); carbohydrate binding domain
YP_003679307.1	COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR001270:IPR003959:IPR001943:IPR013093:IPR 003593:IPR004176:IPR019489; KEGG: tcu:Tcur_2966 ATPase AAA-2 domain protein; PFAM: ATPase AAA; ATPase AAA; UvrB/UvrC protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: C1YRJ0 ATPase with chaperone activity, ATP-binding subunit; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif
YP_003679308.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: tcu:Tcur_2010 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: C1YRI9 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003679309.1	COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: sro:Sros_1024 flavoprotein; PFAM: NADPH-dependent FMN reductase; SPTR: C1YRI8 Predicted flavoprotein; PFAM: NADPH-dependent FMN reductase
YP_003679310.1	COGs: COG3903 ATPase; InterProIPR005158:IPR001867:IPR000767:IPR011990:IPR 011717:IPR016032; KEGG: sgr:SGR_3470  AfsR-like transcriptional regulator; PFAM: transcriptional activator domain; transcriptional regulator domain protein; hypothetical protein; SMART: transcriptional regulator domain protein; SPTR: C1YRI7 Predicted ATPase, COG3903; PFAM: Bacterial transcriptional activator domain; transcriptional regulatory protein, C terminal
YP_003679311.1	COGs: COG1879 ABC-type sugar transporter periplasmic component; InterPro IPR001761; KEGG: msm:MSMEG_3999 ABC transporter periplasmic-binding protein YphF; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: C1YRI6 Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: family
YP_003679312.1	COGs: COG1129 ABC-type sugar transporter ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: msm:MSMEG_4000 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YRI5 Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter
YP_003679313.1	COGs: COG1172 ribose/xylose/arabinose/galactoside ABC-type transporters permeases; InterPro IPR001851; KEGG: msm:MSMEG_4001 ribose transporter permease RbsC; PFAM: inner-membrane translocator; SPTR: C1YRI4 Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: Branched-chain amino acid transport system / permease
YP_003679314.1	COGs: COG1063 threonine dehydrogenase and related Zn-dependent dehydrogenase; InterProIPR013149:IPR016040:IPR002328:IPR011032:IPR 013154; KEGG: msm:MSMEG_4002 oxidoreductase, zinc-binding dehydrogenase family protein; PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; SPTR: C1YRI3 Theronine dehydrogenase-like Zn-dependent dehydrogenase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003679315.1	KEGG: msm:MSMEG_4003 hypothetical protein; SPTR: C1YRI2  uncharacterized protein
YP_003679316.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: tfu:Tfu_1784  oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YRI1  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003679317.1	COGs: COG2186 transcriptional regulators; InterPro IPR011711:IPR000524:IPR011991; KEGG: tfu:Tfu_1785 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH; SPTR: C1YRI0 transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003679318.1	COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR018110:IPR013341:IPR013342; KEGG: tfu:Tfu_1786 galactonate dehydratase; PFAM: mandelate racemase/muconate lactonizing protein; SPTR: C1YRH9 Galactonate dehydratase; PFAM: mandelate racemase / muconate lactonizing enzyme, C-terminal domain; mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YP_003679319.1	COGs: COG3386 gluconolactonase; InterPro IPR013658:IPR005511:IPR011042; KEGG: msm:MSMEG_4005 calcium-binding protein; PFAM: SMP-30/gluconolaconase/LRE domain protein; SPTR: C1YRH8 gluconolactonase; PFAM: SMP-30/gluconolaconase/LRE-like region
YP_003679320.1	COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR002173:IPR011611; KEGG: tfu:Tfu_0189 PfkB family carbohydrate kinase; PFAM: PfkB domain protein; SPTR: C1YRH7 Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase
YP_003679321.1	COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887:IPR013785; KEGG: tfu:Tfu_0188 2-keto-3-deoxy-phosphogluconate aldolase; PFAM: KDPG and KHG aldolase; SPTR: C1YRH6 2-keto-3-deoxy-6-phosphogluconate aldolase; PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase
YP_003679322.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395:IPR020471; KEGG: sco:SCO4109 oxidoreductase; PFAM: aldo/keto reductase; SPTR: C1YRH5 Predicted oxidoreductase similar to aryl-alcohol dehydrogenase; PFAM: Aldo/keto reductase family
YP_003679323.1	KEGG: sgr:SGR_2191 hypothetical protein; SPTR: C1YRH4  uncharacterized protein
YP_003679324.1	COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018483:IPR006000:IPR018485:IPR018484; KEGG: svi:Svir_04580 D-xylulose kinase; PFAM: carbohydrate kinase, FGGY-like; SPTR: C1YRH3 D-xylulose kinase; TIGRFAM: xylulokinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase
YP_003679325.1	InterPro IPR011051:IPR010300; KEGG: nfa:nfa4090 hypothetical protein; PFAM: cysteine dioxygenase type I; SPTR: C1YRH2 Cysteine dioxygenase type I; PFAM: Cysteine dioxygenase type I
YP_003679326.1	InterPro IPR001763; KEGG: tcu:Tcur_0472 rhodanese domain protein; SMART: rhodanese; SPTR: C1YRH1 Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain
YP_003679327.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001412:IPR011991:IPR016032:IPR001867; KEGG: tfu:Tfu_1501 response regulator; PFAM: transcriptional regulator; SPTR: C1YRH0 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: transcriptional regulatory protein, C terminal
YP_003679328.1	COGs: COG1464 ABC-type metal ion transporter periplasmic component/surface antigen; InterPro IPR004872; KEGG: tfu:Tfu_0933 ABC transporter substrate-binding protein; PFAM: NLPA lipoprotein; SPTR: C1YRG9 ABC-type metal ion transporter periplasmic component/surface antigen; PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family
YP_003679329.1	COGs: COG4677 Pectin methylesterase; InterPro IPR000070:IPR018040:IPR011050:IPR012334; KEGG: ami:Amir_1843 pectate lyase/Amb allergen; PFAM: pectinesterase; PRIAM: pectinesterase; SPTR: C1YRG8 Pectin methylesterase; PFAM: pectinesterase
YP_003679330.1	COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR002177:IPR012347:IPR009078:IPR008331; KEGG: sco:SCO1050 DNA protection protein; PFAM: ferritin; SPTR: C1YRG7 DNA-binding ferritin-like protein (Oxidative damage protectant); PFAM: Ferritin-like domain
YP_003679331.1	KEGG: str:Sterm_3175 hypothetical protein; SPTR: C1YRG6  uncharacterized protein
YP_003679332.1	KEGG: saq:Sare_2712 CdaR family transcriptional regulator; SPTR: C1YRG5  uncharacterized protein
YP_003679333.1	COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR018170:IPR001395:IPR020471; KEGG: sro:Sros_7952 2,5-didehydrogluconate reductase; PFAM: aldo/keto reductase; PRIAM: 2,5-didehydrogluconate reductase; SPTR: C1YRG4 Aldo/keto reductase, diketogulonate reductase; PFAM: Aldo/keto reductase family
YP_003679334.1	KEGG: nph:NP2108A flagella cluster protein; SPTR: C1YRG3  uncharacterized protein
YP_003679335.1	COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR013813:IPR006175; KEGG: cai:Caci_5521 endoribonuclease L-PSP; PFAM: endoribonuclease L-PSP; SPTR: C1YRG2  translation initiation inhibitor, yjgF family; PFAM: endoribonuclease L-PSP
YP_003679336.1	COGs: COG0697 Permease of the drug/metabolite transporter (DMT) superfamily; InterPro IPR000620; KEGG: sco:SCO5531 integral membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C1YRG1 DMT(Drug/metabolite transporter) superfamily permease; PFAM: EamA-like transporter family
YP_003679337.1	InterPro IPR001647:IPR012287:IPR009057:IPR011075; KEGG: rha:RHA1_ro01135 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YRG0 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003679338.1	KEGG: tfu:Tfu_1335 hypothetical protein; SPTR: C1YRF9  uncharacterized protein
YP_003679339.1	COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR003000; KEGG: tfu:Tfu_1336 Sir2 family regulator; PFAM: silent information regulator protein Sir2; SPTR: C1YRF8 NAD-dependent protein deacetylase, SIR2 family; PFAM: Sir2 family
YP_003679340.1	COGs: COG5635 NTPase (NACHT family); KEGG: tfu:Tfu_1339 hypothetical protein; SPTR: C1YRF7  uncharacterized protein; PFAM: NACHT domain
YP_003679341.1	COGs: COG0692 uracil DNA glycosylase; InterPro IPR018085:IPR002043:IPR005122; KEGG: tfu:Tfu_1341 uracil-DNA glycosylase; PFAM: uracil-DNA glycosylase superfamily; SPTR: C1YRF6 uracil-DNA glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase
YP_003679342.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR016040:IPR013149:IPR011032:IPR013154; KEGG: ami:Amir_0783 alcohol dehydrogenase zinc-binding domain protein; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; SPTR: C1YRF5 Zn-dependent oxidoreductase, NADPH:quinone reductase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003679343.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: ami:Amir_0782 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YRF4 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003679344.1	COGs: COG3387 glucoamylase and related glycosyl hydrolase; InterPro IPR012341:IPR008928:IPR011613; KEGG: tfu:Tfu_1345 hypothetical protein; PFAM: glycoside hydrolase 15-related; SPTR: C1YRF3 glycosyl hydrolase, glucoamylase; PFAM: glycosyl hydrolases family 15
YP_003679345.1	COGs: COG2364 membrane protein; InterPro IPR003740; KEGG: tcu:Tcur_2249 protein of unknown function DUF161; PFAM: protein of unknown function DUF161; SPTR: C1YRF2 Predicted membrane protein, COG2364; PFAM: Uncharacterized BCR, YitT family COG1284
YP_003679346.1	COGs: COG1167 transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterProIPR000524:IPR011991:IPR015424:IPR015422:IPR 004839:IPR015421; KEGG: tcu:Tcur_2248 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; SPTR: C1YRF1 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; Bacterial regulatory proteins, gntR family
YP_003679347.1	COGs: COG2267 lysophospholipase; InterPro IPR000073; KEGG: tfu:Tfu_1347  lipase; PFAM: alpha/beta hydrolase fold; SPTR: C1YRF0 lysophospholipase; PFAM:  lysophospholipase
YP_003679348.1	COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterProIPR000385:IPR013483:IPR013785:IPR006638:IPR 007197:IPR010505; KEGG: tfu:Tfu_1348 molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis protein; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C1YRS0 GTP cyclohydrolase subunit MoaA; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum Cofactor Synthesis C; radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial
YP_003679349.1	COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: tfu:Tfu_1357 hypothetical protein; PFAM: protein of unknown function UPF0027; SPTR: C1YRR9 Uncharacterized conserved protein; PFAM: Uncharacterized protein family UPF0027
YP_003679350.1	KEGG: tfu:Tfu_2952 hypothetical protein; SPTR: C1YRR8  uncharacterized protein
YP_003679351.1	COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: tfu:Tfu_1366 molybdenum cofactor guanylyltransferase; SPTR: C1YRR7 Molybdopterin-guanine dinucleotide biosynthesis protein A
YP_003679352.1	InterPro IPR016024; KEGG: cai:Caci_3495 hypothetical protein; SPTR: C1YJF7  uncharacterized protein (Fragment)
YP_003679353.1	KEGG: sma:SAV_6456 hypothetical protein; SPTR: C1YJF6  uncharacterized protein
YP_003679354.1	COGs: COG3360 conserved hypothetical protein; InterPro IPR009923; KEGG: tcu:Tcur_2274 protein of unknown function DUF1458; PFAM: protein of unknown function DUF1458; SPTR: C1YJF5 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF1458)
YP_003679355.1	KEGG: tfu:Tfu_1369 hypothetical protein; SPTR: C1YJF4  uncharacterized protein
YP_003679356.1	InterPro IPR019948; KEGG: tfu:Tfu_1370 hypothetical protein; PFAM: Gram-positive anchor; SPTR: C1YJF3  uncharacterized protein
YP_003679357.1	COGs: COG1316 transcriptional regulator; InterPro IPR004474; KEGG: tfu:Tfu_1372 cell envelope-related transcriptional attenuator; PFAM: cell envelope-related transcriptional attenuator; SPTR: C1YJF2 cell envelope-related function transcriptional attenuator common domain; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain
YP_003679358.1	COGs: COG1522 transcriptional regulators; InterProIPR019885:IPR000485:IPR011991:IPR011008:IPR 019888; KEGG: tfu:Tfu_1373 AsnC family transcriptional regulator; SMART: transcription regulator, AsnC-type; SPTR: C1YJF1 transcriptional regulator
YP_003679359.1	COGs: COG0684 Demethylmenaquinone methyltransferase; InterPro IPR005493; KEGG: app:CAP2UW1_2989 dimethylmenaquinone methyltransferase; PFAM: dimethylmenaquinone methyltransferase; SPTR: C1YJF0 Demethylmenaquinone methyltransferase; PFAM: Demethylmenaquinone methyltransferase
YP_003679360.1	COGs: COG2186 transcriptional regulators; InterPro IPR000524:IPR011991:IPR011711; KEGG: tfu:Tfu_1374 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR family transcriptional regulator; SMART: regulatory protein GntR HTH; SPTR: C1YJE9 transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003679361.1	COGs: COG2807 Cyanate permease; InterPro IPR011701:IPR016196; KEGG: tfu:Tfu_1375  integral membrane transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YJE8 Cyanate permease; PFAM: Major Facilitator Superfamily; TIGRFAM: cyanate transporter
YP_003679362.1	InterPro IPR003675; KEGG: tfu:Tfu_1376 hypothetical protein; PFAM: hypothetical protein; SPTR: C1YJE7 CAAX amino terminal protease family; PFAM: CAAX amino terminal protease family
YP_003679363.1	KEGG: GH15913 gene product from transcript GH15913-RA; SPTR: C1YJE6  uncharacterized protein
YP_003679364.1	KEGG: rha:RHA1_ro11131 hypothetical protein; SPTR: C1YJE5  uncharacterized protein
YP_003679365.1	COGs: COG1943 transposase and inactivated derivatives; InterPro IPR002686; KEGG: mgi:Mflv_5481 transposase IS200-family protein; PFAM: transposase IS200-family protein; SPTR: C1YJE4 transposase; PFAM: transposase IS200 like
YP_003679366.1	COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095:IPR001959; KEGG: sro:Sros_6879 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family; SPTR: C1YJE3 transposase, IS605 OrfB family, central region; TIGRFAM: transposase, IS605 OrfB family; PFAM:  transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; transposase, , N-terminal domain
YP_003679367.1	COGs: COG2224 isocitrate lyase; InterPro IPR006254:IPR018523:IPR000918:IPR015813; KEGG: tfu:Tfu_1377 isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; SPTR: C1YJE2 isocitrate lyase; TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase family; TIGRFAM: isocitrate lyase
YP_003679368.1	InterPro IPR001387:IPR010982:IPR010359; KEGG: tfu:Tfu_1378 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; SMART: helix-turn-helix domain protein; SPTR: C1YJE1 Predicted transcriptional regulator; PFAM: Helix-turn-helix; Domain of unknown function (DUF955)
YP_003679369.1	COGs: COG1960 acyl-CoA dehydrogenase; InterProIPR013786:IPR006091:IPR006090:IPR009100:IPR 013764:IPR006092:IPR009075; KEGG: tfu:Tfu_1379  acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: C1YJE0 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain
YP_003679370.1	KEGG: xac:XAC0034 hypothetical protein; SPTR: C1YJD9  uncharacterized protein
YP_003679371.1	KEGG: tfu:Tfu_1381 hypothetical protein; SPTR: C1YJD8  uncharacterized protein
YP_003679372.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: tfu:Tfu_1383  transcriptional regulatory protein; PFAM: regulatory protein TetR; SPTR: C1YJD7 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003679373.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR009061; KEGG: tfu:Tfu_1384 regulatory protein, MerR; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YJD6 Predicted transcriptional regulator; PFAM: MerR, DNA binding; MerR family regulatory protein
YP_003679374.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: tfu:Tfu_1385  oxidoreductase; PFAM: aldo/keto reductase; SPTR: C1YJD5 Predicted oxidoreductase similar to aryl-alcohol dehydrogenase; PFAM: Aldo/keto reductase family
YP_003679375.1	KEGG: hypothetical protein; SPTR: C1YJD4  uncharacterized protein
YP_003679376.1	COGs: COG3973 Superfamily I DNA and RNA helicase; InterPro IPR014016; KEGG: ami:Amir_1311 superfamily I DNA and RNA helicase-like protein; SPTR: C1YJD3 DNA/RNA helicase, superfamily I; PFAM: Viral (Superfamily 1) RNA helicase
YP_003679377.1	COGs: COG0147 anthranilate/para-aminobenzoate synthase component I; InterProIPR010112:IPR017926:IPR005801:IPR006220:IPR 011702:IPR006805:IPR015890:IPR000991; KEGG: tfu:Tfu_1386 anthranilate synthase; PFAM: chorismate binding-like; anthranilate synthase component I domain protein; glutamine amidotransferase class-I; SPTR: C1YJD2 anthranilate synthase; TIGRFAM: anthranilate synthase; PFAM: glutamine amidotransferase class-I; chorismate binding enzyme; anthranilate synthase component I, N terminal region; TIGRFAM: glutamine amidotransferase or aminodeoxychorismate synthase; anthranilate synthase, alpha proteobacterial clade
YP_003679378.1	KEGG: nca:Noca_3622 hypothetical protein; SPTR: C1YJD1  uncharacterized protein
YP_003679379.1	COGs: COG1351 alternative thymidylate synthase; InterPro IPR003669; KEGG: tfu:Tfu_1387 thymidylate synthase complementing protein ThyX; PFAM: thymidylate synthase complementing protein ThyX; SPTR: C1YJD0 Thymidylate synthase, flavin-dependent; TIGRFAM: thymidylate synthase, flavin-dependent; PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent
YP_003679380.1	KEGG: sen:SACE_3202 hypothetical protein; SPTR: C1YJC9  uncharacterized protein
YP_003679381.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR004104; KEGG: ami:Amir_3836 oxidoreductase domain protein; PFAM: oxidoreductase domain; SPTR: C1YJC8  uncharacterized protein
YP_003679382.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR013022:IPR012307; KEGG: sen:SACE_3210 xylose isomerase domain-containing protein; PFAM: Xylose isomerase domain protein TIM barrel; SPTR: A4FEL0 xylose isomerase; PFAM: Xylose isomerase-like TIM barrel
YP_003679383.1	COGs: COG0624 acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933; KEGG: sen:SACE_3209 hypothetical protein; PFAM: peptidase M20; SPTR: C1YJN5 acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase; PFAM: peptidase family M20/M25/M40
YP_003679384.1	COGs: COG2055 malate/L-lactate dehydrogenase; InterPro IPR003767; KEGG: sen:SACE_3208 malate/L-lactate dehydrogenase; PFAM: malate/L-lactate dehydrogenase; SPTR: C1YJN3 malate/lactate dehydrogenase; PFAM: malate/L-lactate dehydrogenase
YP_003679385.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683; KEGG: ami:Amir_3840 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: C1YJC7 Predicted dehydrogenase; PFAM: oxidoreductase family, NAD-binding Rossmann fold
YP_003679386.1	KEGG: ami:Amir_3841 hypothetical protein; SPTR: C1YJC6  uncharacterized protein
YP_003679387.1	InterProIPR002048:IPR018247:IPR018248:IPR018249:IPR 011992; KEGG: ami:Amir_3842  signal transduction protein with EFhand domain; PFAM: EF-Hand domain; SPTR: C1YJC5  calcium-binding protein
YP_003679388.1	InterProIPR018247:IPR018249:IPR011992:IPR002048:IPR 018248; KEGG: ami:Amir_3842  signal transduction protein with EFhand domain; PFAM: EF-Hand domain; SPTR: C1YJC4 Ca2+-binding protein (EF-Hand superfamily)
YP_003679389.1	COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR015421:IPR015422:IPR015424:IPR000653; KEGG: ami:Amir_3835 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: C1YJC3 Predicted PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_003679390.1	COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR015424:IPR015422:IPR000653:IPR015421; KEGG: sen:SACE_3213 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: C1YJC2 Predicted PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_003679391.1	InterPro IPR000537; KEGG: ami:Amir_3832 UbiA prenyltransferase; PFAM: UbiA prenyltransferase; SPTR: C1YJC1 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase family
YP_003679392.1	COGs: COG1232 protoporphyrinogen oxidase; InterPro IPR002937:IPR003042; KEGG: sen:SACE_3215 hypothetical protein; PFAM: amine oxidase; SPTR: C1YJC0 protoporphyrinogen oxidase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: protoporphyrinogen oxidase
YP_003679393.1	COGs: COG0318 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: sen:SACE_3216 long-chain acyl-CoA synthetase, PFAM: AMP-dependent synthetase and ligase; SPTR: C1YJB9 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme
YP_003679394.1	COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: sen:SACE_3218 acyl-CoA transferase/carnitine dehydratase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: C1YJB8 Predicted acyl-CoA transferase/carnitine dehydratase; PFAM: CoA-transferase family III
YP_003679395.1	COGs: COG0318 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR013216:IPR000873; KEGG: sen:SACE_3219 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; methyltransferase type 11; SPTR: C1YJB7 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: methyltransferase domain; AMP-binding enzyme
YP_003679396.1	InterPro IPR013538; KEGG: rha:RHA1_ro06715 hypothetical protein; PFAM: activator of Hsp90 ATPase 1 family protein; SPTR: C1YJB6 activator of Hsp90 ATPase-like protein; PFAM: activator of Hsp90 ATPase homolog 1-like protein
YP_003679397.1	KEGG: tfu:Tfu_1907 hypothetical protein; SPTR: C1YJB4  uncharacterized protein
YP_003679398.1	InterPro IPR000772:IPR008997:IPR011050; KEGG: tfu:Tfu_1643 parallel beta-helix repeat-containing ricin B lectin; PFAM: ricin B lectin; SMART: ricin B lectin; SPTR: C1YJB2  carbohydrate-binding protein; PFAM: ricin-type beta-trefoil lectin domain
YP_003679399.1	KEGG: ami:Amir_2958 hypothetical protein; SPTR: C1YJB1  uncharacterized protein
YP_003679400.1	KEGG: nfa:nfa8120 hypothetical protein; SPTR: C1YJB0  uncharacterized protein
YP_003679401.1	InterPro IPR002701:IPR020822:IPR008240; KEGG: sen:SACE_7067 chorismate mutase; PFAM: chorismate mutase, type II; SMART: chorismate mutase; SPTR: C1YJA9 chorismate mutase, TIGRFAM: chorismate mutase; PFAM: chorismate mutase type II; TIGRFAM: chorismate mutase
YP_003679402.1	KEGG: sgr:SGR_179 hypothetical protein; SPTR: C1YJA8  uncharacterized protein
YP_003679403.1	COGs: COG3861 conserved hypothetical protein; InterPro IPR011033:IPR007903:IPR019060; KEGG: tfu:Tfu_2680 hypothetical protein; PFAM: Domain of unknown function DUF2382-like; PRC-barrel domain protein; SPTR: C1YJA7 Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF2382); PRC-barrel domain; TIGRFAM: conserved domain
YP_003679404.1	COGs: COG1231 Monoamine oxidase; InterPro IPR001613:IPR002937; KEGG: rca:Rcas_2074 amine oxidase; PFAM: amine oxidase; SPTR: C1YJN0 Monoamine oxidase; PFAM: Flavin containing amine oxidoreductase
YP_003679405.1	COGs: COG0558 phosphatidylglycerophosphate synthase; InterPro IPR000462; KEGG: tfu:Tfu_1393 CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: C1YJM7 CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_003679406.1	COGs: COG1208 nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/subunit epsilons (eIF-2Bgamma/eIF-2Bepsilon); InterProIPR016055:IPR011004:IPR005835:IPR001451:IPR 005844:IPR005845; KEGG: tfu:Tfu_1394 mannose-1-phosphate guanylyltransferase / phosphomannomutase; PFAM: nucleotidyl transferase; transferase hexapeptide repeat containing protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; SPTR: C1YJ41 nucleoside-diphosphate-sugar pyrophosphorylase family protein; PFAM: phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; nucleotidyl transferase; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: glucose-1-phosphate thymidylylransferase, long form
YP_003679407.1	COGs: COG1716 FOG: FHA domain; InterPro IPR000253:IPR008984; KEGG: tfu:Tfu_1395 forkhead-associated; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: C1YJ40 FHA domain-containing protein; PFAM: FHA domain
YP_003679408.1	COGs: COG1259 conserved hypothetical protein; InterPro IPR003729; KEGG: tfu:Tfu_1396 hypothetical protein; PFAM: protein of unknown function DUF151; SPTR: C1YJ39 Uncharacterized conserved protein; PFAM: Uncharacterised ACR, COG1259
YP_003679409.1	InterPro IPR009061:IPR000551; KEGG: tfu:Tfu_1397 regulatory protein, MerR; SMART: regulatory protein MerR; SPTR: C1YJH0  uncharacterized protein
YP_003679410.1	COGs: COG1003 glycine cleavage system protein P (pyridoxal-binding) C-terminal domain; InterPro IPR003437:IPR015421:IPR015424:IPR020580; KEGG: tfu:Tfu_1398 glycine dehydrogenase; PFAM: glycine cleavage system P-protein-like; PRIAM: glycine dehydrogenase (decarboxylating); SPTR: C1YJG9 glycine dehydrogenase (Decarboxylating) subunit beta; glycine dehydrogenase (Decarboxylating) alpha subunit; TIGRFAM: glycine dehydrogenase; PFAM: glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating)
YP_003679411.1	InterPro IPR011990:IPR019734:IPR011717:IPR013026; KEGG: tfu:Tfu_1399 hypothetical protein; PFAM: hypothetical protein; SPTR: C1YJG8 Tetratricopeptide repeat protein
YP_003679412.1	KEGG: sro:Sros_4011 hypothetical protein; SPTR: C1YJG5  uncharacterized protein
YP_003679413.1	COGs: COG2966 conserved hypothetical protein; InterPro IPR010619; KEGG: tfu:Tfu_1818 hypothetical protein; PFAM: protein of unknown function DUF1212; SPTR: C1YJG4 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF1212)
YP_003679414.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR000792:IPR001789:IPR011991:IPR011006:IPR 016032; KEGG: sro:Sros_5905 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YJG3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003679415.1	COGs: COG2887 RecB family exonuclease; KEGG: tfu:Tfu_1816 hypothetical protein; SPTR: C1YJG2 RecB family exonuclease; PFAM: protein of unknown function (DUF2800)
YP_003679416.1	COGs: COG1994 Zn-dependent protease; InterPro IPR016483:IPR008915:IPR000644; KEGG: tfu:Tfu_1815 hypothetical protein; PFAM: peptidase M50; hypothetical protein; SPTR: C1YJG1 Zn-dependent protease; PFAM: peptidase family M50
YP_003679417.1	KEGG: tfu:Tfu_1814 hypothetical protein; SPTR: C1YJG0  uncharacterized protein; PFAM: DNA recombination-mediator protein A
YP_003679418.1	InterPro IPR001387:IPR010982; KEGG: tfu:Tfu_1813 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YJA6 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003679419.1	KEGG: tfu:Tfu_1812 hypothetical protein; SPTR: C1YJA5  uncharacterized protein
YP_003679420.1	COGs: COG1940 transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: tfu:Tfu_1811 polyphosphate glucokinase; PFAM: ROK family protein; SPTR: C1YJA3 transcriptional regulator/sugar kinase; PFAM: ROK family
YP_003679421.1	COGs: COG2519 tRNA(1-methyladenosine) methyltransferase and related methyltransferase; InterPro IPR014816; KEGG: tfu:Tfu_1810 tRNA (adenine-58-N(1)-) methyltransferase; PFAM: tRNA methyltransferase complex GCD14 subunit; PRIAM: tRNA (adenine-N(1)-)-methyltransferase; SPTR: C1YJA2 tRNA (adenine-58-N(1)-) methyltransferase; PFAM: tRNA methyltransferase complex GCD14 subunit
YP_003679422.1	COGs: COG1222 ATP-dependent 26S proteasome regulatory subunit; InterPro IPR003960:IPR003593:IPR003959; KEGG: tfu:Tfu_1809 vesicle-fusing ATPase; PFAM: ATPase AAA; SMART: AAA ATPase; SPTR: C1YJA1 ATP-dependent 26S proteasome regulatory subunit; PFAM: ATPase family associated with various cellular activities (AAA)
YP_003679423.1	COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644:IPR002550:IPR005170; KEGG: tfu:Tfu_1263 CBS; PFAM: protein of unknown function DUF21; hypothetical protein; transporter-associated region; SMART: hypothetical protein; SPTR: C1YJA0 CBS domain-containing protein; PFAM: CBS domain; Domain of unknown function DUF21; transporter associated domain
YP_003679424.1	InterPro IPR011389:IPR004989:IPR004347; KEGG: tfu:Tfu_1796  proteasome component; PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; SPTR: C1YJ99  uncharacterized protein; PFAM: Pup-ligase protein
YP_003679425.1	COGs: COG2508 Regulator of polyketide synthase expression; InterPro IPR012914; KEGG: tfu:Tfu_1795 helix-turn-helix, fis-type; PFAM: purine catabolism PurC domain protein; SPTR: C1YJ98 Regulator of polyketide synthase expression; PFAM: Purine catabolism regulatory protein-like family
YP_003679426.1	InterPro IPR011701:IPR016196; KEGG: tfu:Tfu_1794 major facilitator family transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YJ97 Arabinose efflux permease family protein; PFAM: Sugar (and other) transporter
YP_003679427.1	COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR011059:IPR013108; KEGG: tfu:Tfu_1793 hypothetical protein; PFAM: amidohydrolase; SPTR: C1YJ96 Predicted TIM-barrel fold metal-dependent hydrolase, COG1574; PFAM: Amidohydrolase family
YP_003679428.1	InterPro IPR001254:IPR018114:IPR009003:IPR001316; KEGG: sen:SACE_6506 serine protease precursor; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SPTR: C1YJ95 Trypsin; PFAM: alpha-lytic protease prodomain
YP_003679429.1	InterPro IPR018114:IPR009003:IPR001316:IPR001254; KEGG: sen:SACE_0504 serine protease precursor; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SPTR: C1YJ94 Trypsin; PFAM: alpha-lytic protease prodomain
YP_003679430.1	InterPro IPR008515; KEGG: tfu:Tfu_1791 hypothetical protein; PFAM: protein of unknown function DUF797; SPTR: C1YJ93  uncharacterized protein; PFAM: Pup-like protein
YP_003679431.1	COGs: COG0638 20S proteasome alpha and beta subunits; InterPro IPR001353; KEGG: tfu:Tfu_1790 proteasome subunit beta; PFAM: 20S proteasome A and subunit betas; SPTR: C1YJ92 Proteasome endopeptidase complex, beta component; PFAM: Proteasome subunit
YP_003679432.1	COGs: COG0638 20S proteasome alpha and beta subunits; InterPro IPR001353; KEGG: tfu:Tfu_1789  20S proteasome alpha-subunit; PFAM: 20S proteasome A and subunit betas; SPTR: C1YJ91 20S proteasome subunit (alpha or beta); PFAM: Proteasome subunit
YP_003679433.1	InterPro IPR011389:IPR004989:IPR004347; KEGG: tfu:Tfu_1788 hypothetical protein; PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; SPTR: C1YJ90  uncharacterized protein; PFAM: Pup-ligase protein
YP_003679434.1	COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: tfu:Tfu_1773 FKBP-type peptidyl-prolyl cis-trans isomerase 1; PFAM: peptidylprolyl isomerase FKBP-type; SPTR: C1YJ89 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase
YP_003679435.1	COGs: COG0223 Methionyl-tRNA formyltransferase; InterPro IPR002376:IPR005793:IPR011034; KEGG: pca:Pcar_1117 methionyl-tRNA formyltransferase; PFAM: formyl transferase; SPTR: C1YJ88 Methionyl-tRNA formyltransferase; PFAM: Formyl transferase; Formyl transferase, C-terminal domain
YP_003679436.1	KEGG: tfu:Tfu_1772 hypothetical protein; SPTR: C1YJ87  uncharacterized protein
YP_003679437.1	COGs: COG2378 transcriptional regulator protein; KEGG: tfu:Tfu_1771 transcriptional regulator; SPTR: C1YJ86 Predicted transcriptional regulator, COG2378
YP_003679438.1	KEGG: sma:SAV_5833 secreted protein; SPTR: C1YJ85  uncharacterized protein
YP_003679439.1	COGs: COG1826 Sec-independent protein secretion pathway components; InterPro IPR003369; KEGG: tfu:Tfu_1769 twin-arginine translocation protein TatA/E; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: C1YJ84 Sec-independent protein secretion pathway component; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_003679440.1	COGs: COG0805 Sec-independent protein secretion pathway component TatC; InterPro IPR002033:IPR019822; KEGG: tfu:Tfu_1768 sec-independent protein translocase TatC; PFAM: Sec-independent periplasmic protein translocase; SPTR: C1YJ83 Twin arginine targeting protein translocase subunit TatC; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC
YP_003679441.1	InterPro IPR007278; KEGG: tfu:Tfu_1767 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YJ82  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003679442.1	COGs: COG4326 sporulation control protein; InterPro IPR009776; KEGG: tfu:Tfu_1250 hypothetical protein; PFAM: SpoOM family protein; SPTR: C1YJ81 sporulation control protein; PFAM: SpoOM protein
YP_003679443.1	KEGG: aav:Aave_3129 hypothetical protein; SPTR: C1YJ80  uncharacterized protein
YP_003679444.1	InterPro IPR003615:IPR002711; KEGG: fal:FRAAL4530 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: C1YJ79 HNH endonuclease; PFAM: HNH endonuclease; Domain of unknown function DUF222
YP_003679446.1	COGs: COG2060 K+-transporting ATPase A chain; InterPro IPR004623; KEGG: cmi:CMM_2751 potassium-transporting ATPase A; PFAM: K transporting ATPase alpha; PRIAM: Potassium-transporting ATPase; SPTR: C1YJ76 K+-transporting ATPase, KdpA; TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: Potassium-transporting ATPase alpha; TIGRFAM: K+-transporting ATPase, KdpA
YP_003679447.1	COGs: COG2216 High-affinity K+ transporter ATPase chain B; InterProIPR018303:IPR006391:IPR001757:IPR008250:IPR 005834; KEGG: cmi:CMM_2752  potassium-transporting ATPase B chain, P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: C1YJ75 K+-transporting ATPase, B subunit; TIGRFAM: K+-transporting ATPase beta; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase beta
YP_003679448.1	COGs: COG2156 K+-transporting ATPase c chain; InterPro IPR003820; KEGG: cms:CMS_0460  cation transport ATPase component; PFAM: K transporting ATPase KdpC subunit; PRIAM: Potassium-transporting ATPase; SPTR: C1YJ74 K+-transporting ATPase, C subunit; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K+-transporting ATPase, c chain; TIGRFAM: K+-transporting ATPase, C subunit
YP_003679449.1	COGs: COG2205 osmosensitive K+ channel histidine kinase; InterProIPR018170:IPR005467:IPR014729:IPR003594:IPR 009082:IPR003661:IPR004358:IPR003852:IPR006016; KEGG: cmi:CMM_2754  two-component system, sensor kinase; PFAM: osmosensitive K channel His kinase sensor; UspA domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: C1YJ73 osmosensitive K+ channel signal transduction histidine kinase; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Universal stress protein family; His Kinase A (phosphoacceptor) domain; osmosensitive K+ channel His kinase sensor domain
YP_003679450.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011991:IPR011006:IPR001867; KEGG: pac:PPA0119 two-component response regulator, KdpE; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C1YJ71 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal
YP_003679451.1	InterPro IPR006312:IPR003369; KEGG: sco:SCO1633 secreted protein; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: C1YJ70 Twin arginine-targeting protein translocase, TatA/E family; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_003679452.1	COGs: COG1597 Sphingosine kinase; InterPro IPR005218:IPR001206:IPR016064; KEGG: tfu:Tfu_1766 hypothetical protein; PFAM: diacylglycerol kinase; SMART: diacylglycerol kinase catalytic region; SPTR: C1YJ69  uncharacterized protein; PFAM: diacylglycerol kinase catalytic domain; TIGRFAM: conserved protein of unknown function cotranscribed with Bmr (bmrU)
YP_003679453.1	COGs: COG4581 Superfamily II RNA helicase; InterProIPR014021:IPR001650:IPR014001:IPR011545:IPR 012961; KEGG: tfu:Tfu_1765 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; PFAM: DEAD/DEAH box helicase; helicase; DSH domain protein; SMART: DEAD-like helicase ; helicase; SPTR: Q47P19 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; PFAM: Helicase conserved C-terminal domain; DSHCT (NUC185) domain; DEAD/DEAH box helicase
YP_003679454.1	COGs: COG0853 aspartate 1-decarboxylase; InterPro IPR003190:IPR009010; KEGG: tfu:Tfu_1862 aspartate alpha-decarboxylase; PFAM: aspartate decarboxylase; PRIAM: aspartate 1-decarboxylase; SPTR: C1YJ65 L-aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase
YP_003679455.1	KEGG: tfu:Tfu_1859 hypothetical protein; SPTR: C1YJ64  uncharacterized protein
YP_003679456.1	InterPro IPR016196:IPR011701; KEGG: aau:AAur_2074 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YJ63 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003679457.1	KEGG: scl:sce8934 hypothetical protein; SPTR: C1YJ62  uncharacterized protein; PFAM: Telomeric repeat-binding factor 2
YP_003679458.1	KEGG: tfu:Tfu_1858 hypothetical protein; SPTR: C1YJ61  uncharacterized protein; PFAM: ferric iron reductase FhuF-like transporter; FhuF 2Fe-2S C-terminal domain
YP_003679459.1	KEGG: sgr:SGR_623 hypothetical protein; SPTR: C1YJ60  uncharacterized protein; PFAM: Predicted membrane protein (DUF2306)
YP_003679460.1	COGs: COG0842 ABC-type multidrug transporter permease; InterPro IPR000412:IPR013525; KEGG: nfa:nfa22850  ABC transporter; PFAM: ABC transporter; SPTR: C1YJ59 ABC-type multidrug transporter permease; PFAM: ABC transporter; TIGRFAM: ABC transporter efflux protein, DrrB family
YP_003679461.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR003439:IPR017871:IPR005894:IPR003593; KEGG: nfa:nfa22860  ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YJ58 Daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase; PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit
YP_003679462.1	InterProIPR001647:IPR004111:IPR012287:IPR011075:IPR 009057; KEGG: fal:FRAAL1347 TetR family transcriptional regulatory protein; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; SPTR: C1YJ57 transcriptional regulator, tetR family; PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family
YP_003679463.1	InterPro IPR000923:IPR013216; KEGG: sgr:SGR_1753  methyltransferase; PFAM: methyltransferase type 11; SPTR: C1YJ56 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain
YP_003679464.1	COGs: COG2850 conserved hypothetical protein; InterPro IPR003347:IPR013109; KEGG: tfu:Tfu_1857 hypothetical protein; PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; SPTR: C1YJ55 Cupin superfamily protein; PFAM: Cupin superfamily protein
YP_003679465.1	SPTR: C1YJ54  uncharacterized protein
YP_003679466.1	COGs: COG1505 serine protease of the peptidase family S9A; InterPro IPR002470:IPR004106:IPR002471:IPR001375; KEGG: tfu:Tfu_1856 prolyl oligopeptidase; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; SPTR: C1YJ53 serine protease S9A family peptidase; PFAM: prolyl oligopeptidase, N-terminal beta-propeller domain; prolyl oligopeptidase family
YP_003679467.1	COGs: COG3839 ABC-type sugar transporters ATPase components; InterProIPR008995:IPR003439:IPR017871:IPR003593:IPR 005116; KEGG: tfu:Tfu_1763 ABC-type sugar transporters ATPase components; PFAM: ABC transporter related; TOBE domain protein; SMART: ATPase AAA; SPTR: C1YJ52 carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter
YP_003679468.1	COGs: COG0815 Apolipoprotein N-acyltransferase; InterPro IPR003010:IPR004563; KEGG: tfu:Tfu_1762 apolipoprotein N-acyltransferase; PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: C1YJ51 Apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase
YP_003679469.1	COGs: COG3030 protein affecting phage T7 exclusion by the F plasmid; InterPro IPR007313; KEGG: tfu:Tfu_1761 protein affecting phage T7 exclusion by the F plasmid; PFAM: FxsA cytoplasmic membrane protein; SPTR: C1YJ49 protein affecting phage T7 exclusion by the F plasmid; PFAM: FxsA cytoplasmic membrane protein
YP_003679470.1	COGs: COG0590 cytosine/adenosine deaminase; InterPro IPR002125:IPR016193; KEGG: tfu:Tfu_1723 hypothetical protein; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: C1YJ48 cytosine/adenosine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_003679471.1	COGs: COG0474 Cation transport ATPase; InterProIPR001757:IPR000695:IPR018303:IPR008250:IPR 005834; KEGG: tfu:Tfu_1834 ATPase, E1-E2 type; PFAM: E1-E2 ATPase-associated domain protein; haloacid dehalogenase; SPTR: C1YJ47 P-type ATPase, translocating; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_003679472.1	InterPro IPR008551; KEGG: tfu:Tfu_1833 hypothetical protein; PFAM: protein of unknown function DUF833; SPTR: C1YJ46 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF833)
YP_003679473.1	COGs: COG2273 beta-glucanase/beta-glucan synthetase; InterProIPR000772:IPR013320:IPR008985:IPR000757:IPR 008997; KEGG: ami:Amir_5321 glycoside hydrolase family 16; PFAM: glycoside hydrolase family 16; ricin B lectin; SMART: ricin B lectin; SPTR: C1YJ45 beta-glucanase/beta-glucan synthetase; PFAM: ricin-type beta-trefoil lectin domain; glycosyl hydrolases family 16
YP_003679474.1	KEGG: ade:Adeh_3170 sodium/hydrogen exchanger; SPTR: C1YJ44  uncharacterized protein
YP_003679476.1	KEGG: hypothetical protein; SPTR: C1YJ43  uncharacterized protein
YP_003679477.1	InterPro IPR001387:IPR010982; KEGG: sro:Sros_2542  XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YJ42  uncharacterized protein; PFAM: Helix-turn-helix
YP_003679478.1	InterPro IPR007278; KEGG: tfu:Tfu_1657 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YJV3  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003679479.1	COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR015803:IPR017812:IPR014729; KEGG: tfu:Tfu_1832 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; PRIAM: Cysteine--tRNA ligase; SPTR: C1YJV2 Cysteinyl-tRNA synthetase; TIGRFAM: cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase; PFAM: tRNA synthetases class I (C) catalytic domain; TIGRFAM: cysteinyl-tRNA synthetase; cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase
YP_003679480.1	InterPro IPR004378; KEGG: mab:MAB_3398 hypothetical protein; SPTR: C1YJV1  uncharacterized protein; PFAM: Domain of unknown function (DUF385); TIGRFAM: conserved hypothetical protein TIGR00026
YP_003679481.1	KEGG: sco:SCO7723 hypothetical protein; SPTR: C1YJV0  uncharacterized protein
YP_003679482.1	InterPro IPR010852; KEGG: tfu:Tfu_1827 hypothetical protein; PFAM: protein of unknown function DUF1470; SPTR: C1YJU9  uncharacterized protein; PFAM: protein of unknown function (DUF1470)
YP_003679483.1	InterPro IPR008492:IPR002766; KEGG: tfu:Tfu_1826 hypothetical protein; PFAM: protein of unknown function DUF75; SPTR: C1YJU8 Uncharacterized protein (ATP-grasp superfamily); PFAM: PAC2 family
YP_003679484.1	COGs: COG1410 methionine synthase I cobalamin-binding domain; InterProIPR000489:IPR006158:IPR004223:IPR003726:IPR 011005:IPR003759:IPR011822; KEGG: tfu:Tfu_1825 methionine synthase (B12-dependent); PFAM: homocysteine S-methyltransferase; cobalamin B12-binding domain protein; methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; dihydropteroate synthase DHPS; SPTR: C1YJU7 methionine synthase (B12-dependent); TIGRFAM: methionine synthase; PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain; 5-methyltetrahydrofolate--homocysteine methyltransferase
YP_003679485.1	COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR005833:IPR006402:IPR005834; KEGG: tcu:Tcur_2293 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: C1YJU6 Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_003679486.1	KEGG: sro:Sros_5915 cellulose synthase catalytic subunit (UDP-forming); SPTR: C1YJU5  uncharacterized protein
YP_003679487.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: tfu:Tfu_1822 oligopeptide transport integral membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YJU4 ABC-type dipeptide/oligopeptide/nickel transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003679488.1	COGs: COG0747 ABC-type dipeptide transporter periplasmic component; InterPro IPR000914; KEGG: tfu:Tfu_1821  peptide transporter substrate-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: C1YJU3 ABC-type dipeptide transporter periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_003679489.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: tfu:Tfu_1820  peptide transporter permease; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YJU2 ABC-type dipeptide/oligopeptide/nickel transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003679490.1	COGs: COG1123 ATPase components of various ABC-type transporters contain duplicated ATPase; InterPro IPR017871:IPR003593:IPR003439:IPR013563; KEGG: tfu:Tfu_1819 ATPase components of various ABC-type transporters contain duplicated ATPase; PFAM: ABC transporter related; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; SPTR: C1YJU1 ATPase component of various ABC-type transporters with duplicated ATPase domain; PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK
YP_003679491.1	InterPro IPR001705:IPR018264; KEGG: gbr:Gbro_1467 ribosomal protein L33; PFAM: ribosomal protein L33; SPTR: C1YJU0 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type
YP_003679492.1	COGs: COG0254 ribosomal protein L31; InterPro IPR002150; KEGG: sgr:SGR_547 50S ribosomal protein L31 type B; PFAM: ribosomal protein L31; SPTR: C1YJT9 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; TIGRFAM: ribosomal protein L31
YP_003679493.1	InterPro IPR002677; KEGG: sco:SCO0436 50S ribosomal protein L32; PFAM: ribosomal L32p protein; SPTR: C1YJT8 50S ribosomal protein L32P; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein family; TIGRFAM: ribosomal protein L32
YP_003679494.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sco:SCO3315 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YJT7 transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003679495.1	COGs: COG0392 integral membrane protein; InterPro IPR005242; KEGG: tfu:Tfu_1576 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C1YJT6  uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein
YP_003679496.1	KEGG: jde:Jden_1472 hypothetical protein; SPTR: C1YJT5  uncharacterized protein
YP_003679497.1	InterPro IPR013216; KEGG: bcq:BCQ_2892 methyltransferase; PFAM: methyltransferase type 11; SPTR: C1YJT4 methyltransferase family protein
YP_003679498.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR001958:IPR016196; KEGG: cmi:CMM_0864  multidrug efflux MFS permease; PFAM: major facilitator superfamily MFS_1; SPTR: C1YJT3 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003679499.1	InterPro IPR000835:IPR011991; KEGG: cms:CMS_0118 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YJT2 transcriptional regulator; PFAM: MarR family
YP_003679500.1	COGs: COG0492 thioredoxin reductase; InterPro IPR000103:IPR013027; KEGG: saq:Sare_3651 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: C1YJT1 thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003679501.1	InterPro IPR011051:IPR001387:IPR013096:IPR014710; KEGG: sro:Sros_5358  XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YJT0 Predicted transcriptional regulator; PFAM: Cupin domain; Helix-turn-helix
YP_003679502.1	COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: tfu:Tfu_0894  glycosyltransferase; PFAM: glycosyl transferase family 9; SPTR: C1YJS9 ADP-heptose:LPS heptosyltransferase; PFAM: glycosyltransferase family 9 (heptosyltransferase)
YP_003679503.1	COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000644; KEGG: sma:SAV_1875 oxidoreductase; PFAM: hypothetical protein; SMART: hypothetical protein; SPTR: C1YJS8 Predicted signal-transduction protein containing cAMP-binding and CBS domains; PFAM: CBS domain
YP_003679504.1	COGs: COG2192 carbamoyl transferase NodU family; InterPro IPR017945:IPR003696; KEGG: sco:SCO6180 transferase; PFAM: carbamoyltransferase; SPTR: C1YJS7 Predicted carbamoyl transferase, NodU family; PFAM: carbamoyltransferase
YP_003679505.1	COGs: COG0241 Histidinol phosphatase and related phosphatase; InterProIPR006543:IPR006549:IPR006402:IPR006439:IPR 001173:IPR005834; KEGG: sen:SACE_5574 HAD family hydrolase; PFAM: glycosyl transferase family 2; haloacid dehalogenase; SPTR: C1YJS6 Histidinol-phosphate phosphatase family protein; TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; histidinol-phosphate phosphatase family protein; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: glycosyl transferase family 2; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain
YP_003679506.1	COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: sen:SACE_5573 glycosyl transferase family protein; PFAM: glycosyl transferase family 9; SPTR: C1YJS5 ADP-heptose:LPS heptosyltransferase; PFAM: glycosyltransferase family 9 (heptosyltransferase)
YP_003679507.1	InterPro IPR001296; KEGG: sen:SACE_5572 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: C1YJS4 glycosyltransferase; PFAM: glycosyl transferases group 1
YP_003679508.1	COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: rxy:Rxyl_0713 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Q1AY45 glycosyl transferase, group 1; PFAM: glycosyl transferases group 1
YP_003679509.1	COGs: COG0279 phosphoheptose isomerase; InterPro IPR001347; KEGG: svi:Svir_11240 phosphoheptose isomerase; PFAM: sugar isomerase (SIS); SPTR: C1YJS2 phosphoheptose isomerase; PFAM: SIS domain
YP_003679510.1	COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPro IPR014729:IPR004820:IPR011611:IPR004821; KEGG: rxy:Rxyl_0711 bifunctional ADP-heptose synthase; PFAM: cytidylyltransferase; PfkB domain protein; SPTR: C1YJS1 Cytidyltransferase-related enzyme; TIGRFAM: cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain II; cytidyltransferase-related domain
YP_003679511.1	COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198:IPR016040:IPR002347; KEGG: sen:SACE_5568 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YJS0 Short-chain alcohol dehydrogenase; PFAM: short chain dehydrogenase
YP_003679512.1	COGs: COG0451 nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: sco:SCO6179 nucleotide-sugar dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YJR9 nucleoside-diphosphate-sugar epimerase; PFAM: NAD dependent epimerase/dehydratase family
YP_003679513.1	COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: sen:SACE_5578 glycosyl transferase; PFAM: glycosyl transferase family 2; SPTR: C1YJR8 Predicted glycosyltransferase; PFAM: glycosyl transferase family 2
YP_003679514.1	COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: svi:Svir_11310 predicted glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: C1YJR7 Predicted glycosyltransferase; PFAM: glycosyl transferase family 2
YP_003679515.1	InterPro IPR011701:IPR016196; KEGG: sen:SACE_4982 integral membrane transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YJR6 Cyanate permease; PFAM: Major Facilitator Superfamily
YP_003679516.1	KEGG: sro:Sros_4129 hypothetical protein; SPTR: C1YJR5  uncharacterized protein
YP_003679517.1	COGs: COG1960 acyl-CoA dehydrogenase; InterProIPR009100:IPR009075:IPR005829:IPR006092:IPR 006091:IPR006090:IPR013786:IPR013764; KEGG: tcu:Tcur_1227 acyl-CoA dehydrogenase domain protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: C1YJR4 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase N terminal; acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain
YP_003679518.1	COGs: COG0757 3-dehydroquinate dehydratase II; InterPro IPR001874:IPR018509; KEGG: tfu:Tfu_1635 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II; PRIAM: 3-dehydroquinate dehydratase; SPTR: C1YJR3 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II
YP_003679519.1	COGs: COG0406 fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: svi:Svir_13480 fructose-2,6-bisphosphatase; PFAM: phosphoglycerate mutase; SMART: phosphoglycerate mutase; SPTR: C1YJR2 fructose-2,6-bisphosphatase; PFAM: phosphoglycerate mutase family
YP_003679520.1	InterPro IPR006764; KEGG: stp:Strop_1644 hypothetical protein; PFAM: protein of unknown function DUF574; SPTR: C1YJR1  uncharacterized protein; PFAM: protein of unknown function (DUF574)
YP_003679521.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR009010:IPR010046:IPR006657:IPR006656; KEGG: tfu:Tfu_1737 oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: C1YJR0 Molybdopterin-dependent oxidoreductase subunit alpha; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit
YP_003679522.1	KEGG: svi:Svir_16090 ABC-type multidrug transporter permease; SPTR: C1YJQ9  uncharacterized protein
YP_003679523.1	COGs: COG2208 serine phosphatase RsbU regulator of sigma subunit; InterProIPR010822:IPR000014:IPR013767:IPR001932:IPR 003018; KEGG: sco:SCO7448 hypothetical protein; PFAM: stage II sporulation E family protein; PAS fold domain protein; GAF domain protein; SMART: protein phosphatase 2C domain protein; PAS domain containing protein; GAF domain protein; SPTR: C1YJQ8 PAS domain S-box; TIGRFAM: PAS sensor protein; PFAM: GAF domain; stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box
YP_003679524.1	COGs: COG1063 threonine dehydrogenase and related Zn-dependent dehydrogenase; InterProIPR011032:IPR016040:IPR002328:IPR013154:IPR 013149; KEGG: tfu:Tfu_0885  glutathione-dependent aldehyde dehydrogenase; PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; SPTR: C1YJQ7 Theronine dehydrogenase-like Zn-dependent dehydrogenase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003679525.1	COGs: COG2273 beta-glucanase/beta-glucan synthetase; InterPro IPR008985:IPR013320:IPR000757; KEGG: sgr:SGR_6489  secreted hydrolase; PFAM: glycoside hydrolase family 16; SPTR: C1YJQ6 beta-glucanase/beta-glucan synthetase; PFAM: glycosyl hydrolases family 16
YP_003679526.1	COGs: COG0614 ABC-type Fe3+-hydroxamate transporter periplasmic component; InterPro IPR002491; KEGG: ami:Amir_0200 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: C1YJQ5 ABC-type Fe3+-hydroxamate transporter periplasmic component; PFAM: Periplasmic binding protein
YP_003679527.1	COGs: COG2375 Siderophore-interacting protein; InterPro IPR017927:IPR013113:IPR007037; KEGG: rer:RER_17020 siderophore-interacting protein; PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; SPTR: C1YJQ4 Siderophore-interacting protein; PFAM: Siderophore-interacting protein; Siderophore-interacting FAD-binding domain
YP_003679528.1	COGs: COG1132 ABC-type multidrug transporter ATPase and permeases; InterProIPR017871:IPR017940:IPR011527:IPR001140:IPR 003439; KEGG: rop:ROP_48080  ABC transporter permease/ATP-binding protein; PFAM: ABC transporter; ABC transporter transmembrane protein; SPTR: C1YJQ3 ABC-type multidrug transporter ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane protein
YP_003679529.1	COGs: COG1132 ABC-type multidrug transporter ATPase and permeases; InterProIPR017940:IPR003439:IPR003593:IPR011527:IPR 001140; KEGG: rer:RER_09710 ABC transporter permease/ATP-binding protein; PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: AAA ATPase; SPTR: C1YJQ2 ABC-type multidrug transporter ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane protein
YP_003679530.1	KEGG: cai:Caci_4126 hypothetical protein; SPTR: C1YJQ1  uncharacterized protein
YP_003679531.1	KEGG: cai:Caci_4125 hypothetical protein; SPTR: C1YJQ0  uncharacterized protein
YP_003679532.1	KEGG: cai:Caci_4124 hypothetical protein; SPTR: C1YJP9  uncharacterized protein
YP_003679533.1	KEGG: hypothetical protein; SPTR: C1YJP8  uncharacterized protein
YP_003679534.1	COGs: COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid; InterPro IPR004942; KEGG: fal:FRAAL0016 hypothetical protein; PFAM: Roadblock/LC7 family protein; SPTR: C1YJP7 Uncharacterized conserved protein; PFAM: Roadblock/LC7 domain
YP_003679535.1	COGs: COG0178 excinuclease ATPase; InterPro IPR003593:IPR003439; KEGG: sco:SCO6517 UvrA-like protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YJP6 excinuclease ATPase; PFAM: ABC transporter; TIGRFAM: excinuclease ABC subunit A
YP_003679536.1	COGs: COG2375 Siderophore-interacting protein; InterPro IPR017927:IPR017938:IPR013113:IPR007037; KEGG: rha:RHA1_ro01999 siderophore interacting protein; PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; SPTR: C1YJP5 Siderophore-interacting protein; PFAM: Siderophore-interacting protein; Siderophore-interacting FAD-binding domain
YP_003679537.1	COGs: COG3324 protein related to lactoylglutathione lyase; InterPro IPR004360; KEGG: sro:Sros_7578 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YJP4 Lactoylglutathione lyase family protein; PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003679538.1	KEGG: sro:Sros_6640 hypothetical protein; SPTR: C1YJP3  uncharacterized protein
YP_003679539.1	COGs: COG1167 transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterProIPR000524:IPR015424:IPR004839:IPR011991:IPR 015421; KEGG: sro:Sros_7670  transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; SPTR: C1YJP2 transcriptional regulator with HTH domain and aminotransferase domain; PFAM: aminotransferase class I and II; Bacterial regulatory proteins, gntR family
YP_003679540.1	COGs: COG3467 flavin-nucleotide-binding protein; InterPro IPR012349; KEGG: sro:Sros_7671 hypothetical protein; SPTR: C1YJP1 Predicted flavin-nucleotide-binding protein
YP_003679541.1	COGs: COG4770 acetyl/propionyl-CoA carboxylase alpha subunit; InterProIPR000089:IPR011761:IPR011764:IPR011763:IPR 011054:IPR016185:IPR011053:IPR005479:IPR005481:IPR005482:I PR013537:IPR000022:IPR013817:IPR013816; KEGG: ami:Amir_4238 carbamoyl-phosphate synthase L chain ATP-binding; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; acetyl-CoA carboxylase central domain protein; carboxyl transferase; SPTR: C1YJP0 acetyl/propionyl-CoA carboxylase, alpha subunit; PFAM: carboxyl transferase domain; carbamoyl-phosphate synthase L chain, ATP binding domain; acetyl-CoA carboxylase, central region; Biotin carboxylase C-terminal domain; carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme
YP_003679542.1	InterPro IPR009002:IPR019920:IPR011576; KEGG: fal:FRAAL4571 hypothetical protein; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: C1YJN9 pyridoxamine 5'-phosphate oxidase; TIGRFAM:  F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme
YP_003679543.1	COGs: COG0614 ABC-type Fe3+-hydroxamate transporter periplasmic component; InterPro IPR002491; KEGG: sgr:SGR_6640  ABC transporter solute-binding protein; PFAM: periplasmic binding protein; SPTR: C1YJN8 ABC-type Fe3+-hydroxamate transporter periplasmic component; PFAM: Periplasmic binding protein
YP_003679544.1	COGs: COG0609 ABC-type Fe3+-siderophore transporter permease; InterPro IPR000522; KEGG: sgr:SGR_6641 iron ABC transporter; PFAM: transporter permease; SPTR: C1YJN7 ABC-type Fe3+-siderophore transporter permease; PFAM: FecCD transport family
YP_003679545.1	COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; InterPro IPR003439:IPR017871:IPR003593; KEGG: sgr:SGR_6642  ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YJN4 ABC-type cobalamin/Fe3+-siderophore transporter ATPase component; PFAM: ABC transporter
YP_003679546.1	COGs: COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatase; InterPro IPR011953:IPR003672; KEGG: nca:Noca_2878 cobaltochelatase subunit CobN; PFAM: CobN/magnesium chelatase; PRIAM: Cobaltochelatase; SPTR: C1YJN2 Cobaltochelatase CobN subunit; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/Magnesium Chelatase; TIGRFAM: cobaltochelatase, CobN subunit
YP_003679547.1	COGs: COG2243 precorrin-2 methylase; InterPro IPR000878:IPR012797:IPR014777; KEGG: nca:Noca_2879 precorrin 6A synthase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PRIAM: precorrin-6A synthase (deacetylating); SPTR: C1YJN1 precorrin-6A synthase (Deacetylating); TIGRFAM: precorrin-6A synthase (deacetylating); PFAM: Tetrapyrrole (Corrin/Porphyrin) methylases; TIGRFAM: precorrin-6A synthase (deacetylating)
YP_003679548.1	COGs: COG1492 Cobyric acid synthase; InterPro IPR017929:IPR004459:IPR002586:IPR011698; KEGG: mgi:Mflv_0360 cobyric acid synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyrinic acid ac-diamide synthase; SPTR: C1YJM9 adenosylcobyric acid synthase (glutamine-hydrolysing); TIGRFAM: cobyric acid synthase CobQ; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ
YP_003679549.1	COGs: COG2099 precorrin-6x reductase; InterPro IPR003723; KEGG: mva:Mvan_0378 precorrin-6x reductase; PFAM: precorrin-6x reductase CbiJ/CobK; PRIAM: precorrin-6A reductase; SPTR: C1YJM8 precorrin-6A reductase; TIGRFAM: precorrin-6x reductase; PFAM: precorrin-6x reductase CbiJ/CobK; TIGRFAM: precorrin-6x reductase
YP_003679550.1	InterPro IPR008538; KEGG: sco:SCO4080 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: C1YJM6 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF820)
YP_003679551.1	InterPro IPR001647:IPR012287:IPR011075:IPR009057; KEGG: hoh:Hoch_4754 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YJM5 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003679552.1	KEGG: rer:RER_57280 hypothetical protein; SPTR: C1YJM4  uncharacterized protein
YP_003679553.1	KEGG: ach:Achl_3917 major facilitator superfamily MFS_1; SPTR: C1YJM3  uncharacterized protein
YP_003679554.1	COGs: COG1797 cobyrinic acid a c-diamide synthase; InterPro IPR017929:IPR004484:IPR002586:IPR011698; KEGG: sco:SCO1852 cobyrinic acid a,c-diamide synthase; PFAM: cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; SPTR: C1YJM2 Cobyrinate a,c-diamide synthase; hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing); TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase
YP_003679555.1	COGs: COG2109 ATP:corrinoid adenosyltransferase; InterPro IPR003724; KEGG: svi:Svir_17750 cob(I)yrinic acid a,c-diamide adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: C1YJM1 Cob(I)yrinic acid a,c-diamide adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase
YP_003679556.1	COGs: COG1239 Mg-chelatase subunit ChlI; InterPro IPR002035:IPR003593:IPR011704; KEGG: nca:Noca_2889 protoporphyrin IX magnesium-chelatase; PFAM: von Willebrand factor type A; ATPase associated with various cellular activities AAA_5; SMART: von Willebrand factor type A; ATPase AAA; SPTR: C1YJM0 Mg-chelatase subunit ChlD; PFAM: Magnesium chelatase, subunit ChlI; von Willebrand factor type A domain
YP_003679557.1	COGs: COG2242 precorrin-6B methylase 2; InterPro IPR000878:IPR012818:IPR014008; KEGG: nca:Noca_2890 precorrin-6Y C5,15-methyltransferase (decarboxylating); PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PRIAM: precorrin-6Y C(5,15)-methyltransferase (decarboxylating); SPTR: C1YJL8 precorrin-6Y C5,15-methyltransferase (Decarboxylating); TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Tetrapyrrole (Corrin/Porphyrin) methylases; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
YP_003679558.1	COGs: COG2875 precorrin-4 methylase; InterProIPR000878:IPR003043:IPR006362:IPR014777:IPR 014776; KEGG: mva:Mvan_0382 uroporphyrin-III C/tetrapyrrole methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PRIAM: precorrin-4 C(11)-methyltransferase; SPTR: C1YJL7 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) methylases; TIGRFAM: precorrin-4 C11-methyltransferase
YP_003679559.1	COGs: COG1010 precorrin-3B methylase; InterPro IPR000878:IPR006364:IPR006363:IPR014777; KEGG: svi:Svir_17670 precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: C1YJL6 precorrin-3 methyltransferase; precorrin-2 C20-methyltransferase; TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-2 C20-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) methylases; TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-2 C20-methyltransferase
YP_003679560.1	COGs: COG2082 precorrin isomerase; InterPro IPR003722; KEGG: nca:Noca_2893 precorrin-8X methylmutase; PFAM: precorrin-8X methylmutase CbiC/CobH; PRIAM: precorrin-8X methylmutase; SPTR: C1YJL5 precorrin-8X methylmutase; PFAM: precorrin-8X methylmutase
YP_003679561.1	COGs: COG0155 Sulfite reductase subunit beta (hemoprotein); InterPro IPR005117; KEGG: nca:Noca_2894 nitrite/sulfite reductase hemoprotein subunit beta; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; SPTR: C1YJL4 Sulfite reductase subunit beta (Hemoprotein); PFAM: nitrite/Sulfite reductase ferredoxin-like half domain
YP_003679562.1	COGs: COG0464 ATPase of the AAA+ class; InterProIPR006626:IPR003593:IPR000641:IPR003959:IPR 011050; KEGG: sen:SACE_5457  sporulation protein (partial match); PFAM: ATPase AAA central domain protein; SMART: ATPase AAA; Parallel beta-helix repeat; SPTR: C1YJL3 AAA+ family ATPase; PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: probable Rubsico expression protein CbbX; stage V sporulation protein K
YP_003679563.1	InterPro IPR008462; KEGG: sgr:SGR_3155 hypothetical protein; PFAM: CsbD family protein; SPTR: C1YJL2 CsbD-like protein; PFAM: CsbD-like
YP_003679564.1	COGs: COG1757 Na+/H+ antiporter; InterPro IPR004770:IPR018461; KEGG: ect:ECIAI39_2452 hypothetical protein; PFAM: Na+/H+ antiporter NhaC-like; SPTR: C1YJL1 Na+ antiporter NhaC; TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter family; TIGRFAM: Na+/H+ antiporter NhaC
YP_003679565.1	COGs: COG0626 cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR015424:IPR000277:IPR015421:IPR015422; KEGG: ect:ECIAI39_2453 cystathionine gamma-synthase (CGS) (O-succinylhomoserine (thiol)-lyase); PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; PRIAM: cystathionine beta-lyase; SPTR: C1YJL0 cystathionine beta-lyase/cystathionine gamma-synthase; PFAM: Cys/Met metabolism PLP-dependent enzyme
YP_003679566.1	COGs: COG2186 transcriptional regulators; InterPro IPR011711:IPR000524:IPR011991; KEGG: mta:Moth_2304 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH; SPTR: C1YJK9 transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003679567.1	COGs: COG2205 osmosensitive K+ channel histidine kinase; InterProIPR009082:IPR003852:IPR003594:IPR006016:IPR 003661:IPR005467:IPR004358; KEGG: sro:Sros_0436 osmosensitive K+ channel signal transduction histidine kinase; PFAM: osmosensitive K channel His kinase sensor; ATP-binding region ATPase domain protein; UspA domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: C1YJK8 Sensor protein; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; osmosensitive K+ channel His kinase sensor domain; His Kinase A (phosphoacceptor) domain; Universal stress protein family
YP_003679568.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001867:IPR001789:IPR011991:IPR011006; KEGG: sco:SCO5872 turgor pressure regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein; SPTR: C1YJK7 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal
YP_003679569.1	COGs: COG0168 Trk-type K+ transporters membrane components; InterPro IPR003445; KEGG: svi:Svir_36680 trk-type K+ transport system, membrane component; PFAM: cation transporter; PRIAM: H(+)-transporting two-sector ATPase; SPTR: C1YJK6 Trk-type K+ transporter membrane component; PFAM: Cation transporter; TIGRFAM: potassium uptake protein, TrkH family
YP_003679570.1	COGs: COG2072 flavoprotein involved in K+ transport; InterPro IPR013027:IPR003953; KEGG: sro:Sros_4968  flavoprotein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: C1YJK5 Predicted flavoprotein involved in K+ transport; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003679571.1	InterPro IPR007272; KEGG: sco:SCO7517 integral membrane protein; PFAM: protein of unknown function DUF395 YeeE/YedE; SPTR: C1YJK4 YeeE/YedE family protein (DUF395); PFAM: YeeE/YedE family (DUF395)
YP_003679572.1	KEGG: dia:Dtpsy_3136 L-asparaginase, type II; SPTR: C1YJK3  uncharacterized protein
YP_003679573.1	InterPro IPR006015:IPR014729:IPR006016; KEGG: tfu:Tfu_0357 hypothetical protein; PFAM: UspA domain protein; SPTR: C1YJK2 Universal stress protein UspA-like protein; PFAM: Universal stress protein family
YP_003679574.1	KEGG: dds:Ddes_0615 hypothetical protein; SPTR: C1YJK1  uncharacterized protein
YP_003679575.1	COGs: COG2518 protein-L-isoaspartate carboxylmethyltransferase; InterPro IPR000682; KEGG: tfu:Tfu_3003  O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: C1YJK0 protein-L-isoaspartate carboxylmethyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
YP_003679576.1	InterPro IPR000182:IPR016181; KEGG: fal:FRAAL0437 hypothetical protein; SPTR: C1YJJ9  uncharacterized protein
YP_003679577.1	InterPro IPR001962:IPR014729; KEGG: cai:Caci_6881 asparagine synthase; PFAM: asparagine synthase; SPTR: C1YJJ8 Asparagine synthase; PFAM: Asparagine synthase
YP_003679578.1	KEGG: ankyrin repeat protein; SPTR: C1YJJ7  uncharacterized protein
YP_003679579.1	InterPro IPR000551; KEGG: cai:Caci_0301 DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; SPTR: C1YJJ6 MerR family regulatory protein; PFAM: MerR family regulatory protein; TIGRFAM: DNA binding domain, excisionase family
YP_003679580.1	KEGG: aeh:Mlg_1985 nicotinate phosphoribosyltransferase; SPTR: C1YJJ5  uncharacterized protein
YP_003679581.1	InterPro IPR001387:IPR010982; KEGG: sen:SACE_1141 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YJJ4 Helix-turn-helix protein
YP_003679582.1	COGs: COG0452 phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR003382; KEGG: saq:Sare_3598 hypothetical protein; PFAM: flavoprotein; SPTR: C1YJJ3 phosphopantothenoylcysteine synthetase/decarboxylase; PFAM: Flavoprotein
YP_003679583.1	COGs: COG1437 adenylate cyclase class 2 (thermophilic); InterPro IPR008172; KEGG: fal:FRAAL2704  adenylate cyclase; PFAM: adenylate cyclase; SPTR: C1YJJ2 adenylate cyclase, class 2 (Thermophilic); PFAM: CYTH domain; TIGRFAM: adenylyl cyclase CyaB
YP_003679584.1	KEGG: gbr:Gbro_1042 DNA binding domain protein, excisionase family; SPTR: C1YJJ1  uncharacterized protein
YP_003679585.1	COGs: COG3920 Signal transduction histidine kinase; InterPro IPR003594; KEGG: tcu:Tcur_1945  anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: C1YJJ0 histidine kinase; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003679586.1	InterPro IPR001387:IPR010982; KEGG: tfu:Tfu_1248 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YJI8  uncharacterized protein; PFAM: Helix-turn-helix
YP_003679587.1	InterPro IPR007278; KEGG: tfu:Tfu_1657 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YJI7  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003679588.1	InterPro IPR007278; KEGG: tfu:Tfu_1657 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YJI6  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003679589.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR011051:IPR020449:IPR000005:IPR018060:IPR 003313:IPR009057; KEGG: rer:RER_34570 AraC family transcriptional regulator; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C1YJI5 DNA-binding domain-containing protein, AraC-type; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003679590.1	InterPro IPR002781; KEGG: rer:RER_34580 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: C1YJI4 Predicted permease; PFAM: Sulfite exporter TauE/SafE
YP_003679591.1	COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR016040:IPR002198; KEGG: kra:Krad_3783 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YJI3  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003679592.1	KEGG: cai:Caci_1838 hypothetical protein; SPTR: C1YJI2  uncharacterized protein
YP_003679593.1	COGs: COG3173 aminoglycoside phosphotransferase; InterPro IPR011009:IPR002575; KEGG: xce:Xcel_2821 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: C1YJI1 Predicted aminoglycoside phosphotransferase; PFAM: phosphotransferase enzyme family
YP_003679594.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: sco:SCO0262 LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: C1YJI0 LysR family transcriptional regulator; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain
YP_003679595.1	COGs: COG0110 acetyltransferase (isoleucine patch superfamily); InterPro IPR011004:IPR018357:IPR001451; KEGG: sco:SCO0261 acetyltransferase; SPTR: C1YJH9 acetyltransferase (isoleucine patch superfamily)
YP_003679596.1	COGs: COG1473 metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR017144:IPR011650:IPR010168:IPR002933; KEGG: aau:AAur_0573  amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: C1YJH8 Amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain; TIGRFAM: amidohydrolase
YP_003679597.1	COGs: COG3342 conserved hypothetical protein; InterPro IPR010430; KEGG: aau:AAur_0574 hypothetical protein; PFAM: protein of unknown function DUF1028; SPTR: C1YJH7 Uncharacterized conserved protein; PFAM: Family of unknown function (DUF1028)
YP_003679598.1	COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR013813:IPR006175; KEGG: rha:RHA1_ro01781 endoribonuclease; PFAM: endoribonuclease L-PSP; SPTR: C1YJH6  translation initiation inhibitor, yjgF family; PFAM: endoribonuclease L-PSP
YP_003679599.1	COGs: COG2072 flavoprotein involved in K+ transport; InterPro IPR013027:IPR006076; KEGG: aau:AAur_0571  flavin-binding monooxygenase-like; PFAM: FAD dependent oxidoreductase; SPTR: C1YJH5 Predicted flavoprotein involved in K+ transport; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003679600.1	COGs: COG2223 nitrate/nitrite transporter; InterPro IPR005829:IPR011701:IPR016196; KEGG: cgt:cgR_0768 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YJH4 nitrate/nitrite transporter; PFAM: Major Facilitator Superfamily
YP_003679601.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: mjl:Mjls_2639 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: C1YJH3 transcriptional regulator, COG0583; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_003679602.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: cai:Caci_1896 histidine kinase dimerisation and phosphoacceptor region; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C1YJH2 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase
YP_003679603.1	COGs: COG2311 membrane protein; InterPro IPR007349:IPR007299; KEGG: tfu:Tfu_0622 hypothetical protein; PFAM: protein of unknown function DUF418; protein of unknown function DUF405; SPTR: C1YJ38 Predicted membrane protein, COG2311; PFAM: protein of unknown function (DUF418)
YP_003679604.1	COGs: COG1506 dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011042:IPR001375; KEGG: sro:Sros_8147 hypothetical protein; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; SPTR: C1YJ37 dipeptidyl aminopeptidase/acylaminoacyl peptidase; PFAM: prolyl oligopeptidase family
YP_003679605.1	KEGG: sen:SACE_6630 hypothetical protein; SPTR: C1YJ36  uncharacterized protein
YP_003679606.1	InterPro IPR011701:IPR016196; KEGG: sgr:SGR_6837 major facilitator superfamily permease; PFAM: major facilitator superfamily MFS_1; SPTR: C1YJ35 Major Facilitator Superfamily transporter; PFAM: Major Facilitator Superfamily
YP_003679607.1	COGs: COG3226 conserved hypothetical protein; InterPro IPR001647:IPR009057:IPR012287; KEGG: sgr:SGR_6838 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YJ34 Uncharacterized conserved protein; PFAM: Bacterial regulatory proteins, tetR family
YP_003679608.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR016196:IPR011701; KEGG: sen:SACE_5709 integral membrane transport protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YJ33 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003679609.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: rer:RER_58130 LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: C1YJ32 LysR family transcriptional regulator; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_003679610.1	COGs: COG2343 conserved hypothetical protein; InterPro IPR007361; KEGG: msm:MSMEG_6469 hypothetical protein; PFAM: protein of unknown function DUF427; SPTR: C1YJH1 Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF427)
YP_003679611.1	KEGG: sgr:SGR_7002 hypothetical protein; SPTR: C1YJG7  uncharacterized protein
YP_003679612.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: cai:Caci_3896 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YJG6 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003679613.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: mjl:Mjls_2191 ABC transporter related; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YJF9 ABC-type multidrug transporter ATPase component; PFAM: ABC transporter
YP_003679614.1	KEGG: msm:MSMEG_1504 antibiotic ABC transporter transmembrane protein; SPTR: C1YWK1  uncharacterized protein (Fragment)
YP_003679615.1	COGs: COG3559  exporter of polyketide antibiotics; KEGG: amt:Amet_1500  ABC antibiotics transporter; SPTR: C1YWK0  exporter of polyketide antibiotics
YP_003679616.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: sro:Sros_5390 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YWJ9 ABC-type multidrug transporter ATPase component; PFAM: ABC transporter
YP_003679617.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sro:Sros_3159  TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YWJ8 transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003679618.1	COGs: COG3340 peptidase E; InterPro IPR005320; KEGG: ami:Amir_4173 dipeptidase E; PFAM: peptidase S51 dipeptidase E; PRIAM: dipeptidase E; SPTR: C1YWJ7 alpha-aspartyl dipeptidase; PFAM: peptidase family S51
YP_003679619.1	COGs: COG1414 transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: sco:SCO0574 IclR family regulatory protein; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; SPTR: C1YWJ6 transcriptional regulator, COG1414; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_003679620.1	COGs: COG1297 membrane protein; InterPro IPR004813; KEGG: ami:Amir_4171 oligopeptide transporter OPT superfamily protein; PFAM: oligopeptide transporter OPT superfamily protein; SPTR: C1YWJ5 Predicted membrane protein, COG1297; PFAM: OPT oligopeptide transporter protein
YP_003679621.1	InterPro IPR010843; KEGG: ami:Amir_4170 AroM family protein; PFAM: AroM family protein; SPTR: C1YWJ4 AroM protein; PFAM: AroM protein
YP_003679622.1	COGs: COG4126 Hydantoin racemase; InterPro IPR015942; KEGG: ami:Amir_4169 Asp/Glu/hydantoin racemase; PFAM: Asp/Glu/hydantoin racemase; SPTR: C1YWJ3 Hydantoin racemase; PFAM: Asp/Glu/Hydantoin racemase
YP_003679623.1	InterPro IPR009561; KEGG: ami:Amir_4168 protein of unknown function DUF1177; PFAM: protein of unknown function DUF1177; SPTR: C1YWJ2  uncharacterized protein; PFAM: protein of unknown function (DUF1177)
YP_003679624.1	COGs: COG1064 Zn-dependent alcohol dehydrogenase; InterProIPR013149:IPR016040:IPR002328:IPR011032:IPR 013154; KEGG: jde:Jden_0114 alcohol dehydrogenase GroES domain protein; PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; SPTR: C1YP45 Zn-dependent alcohol dehydrogenase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003679625.1	InterPro IPR001387; KEGG: fre:Franean1_3750 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YP44 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003679626.1	COGs: COG4334 conserved hypothetical protein; InterPro IPR016888; KEGG: ttr:Tter_1973 hypothetical protein; PFAM: Uncharacterised conserved protein UCP028498; SPTR: C1YP43 Uncharacterized conserved protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2255)
YP_003679627.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060:IPR009057; KEGG: fre:Franean1_4177 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C1YP42 AraC family transcriptional regulator; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003679628.1	COGs: COG2764 conserved hypothetical protein; InterPro IPR004360; KEGG: rop:ROP_37070 hypothetical protein; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YP41 Uncharacterized conserved protein; PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003679629.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013325:IPR013324:IPR014284:IPR014303:IPR 007627:IPR013249; KEGG: sma:SAV_909 ECF subfamily RNA polymerase sigma factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: C1YP40 RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, TIGR02957 family; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, TIGR02957 family
YP_003679630.1	COGs: COG2128 conserved hypothetical protein; InterPro IPR004675:IPR003779; KEGG: sco:SCO2885 hypothetical protein; PFAM: carboxymuconolactone decarboxylase; SPTR: C1YP39 Alkylhydroperoxidase AhpD family core domain; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain
YP_003679631.1	COGs: COG3386 gluconolactonase; InterPro IPR013658:IPR011042; KEGG: sgr:SGR_6950 hypothetical protein; PFAM: SMP-30/gluconolaconase/LRE domain protein; SPTR: C1YP38 gluconolactonase; PFAM: SMP-30/gluconolaconase/LRE-like region
YP_003679632.1	COGs: COG2072 flavoprotein involved in K+ transport; InterPro IPR013027:IPR002938; KEGG: ami:Amir_4867 cyclohexanone monooxygenase; PFAM: monooxygenase FAD-binding; SPTR: C1YP37 Predicted flavoprotein involved in K+ transport; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003679633.1	InterPro IPR000835:IPR011991; KEGG: sro:Sros_4437 transcriptional regulators-like protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YP36 MarR family regulator; PFAM: MarR family
YP_003679634.1	KEGG: ami:Amir_3342 hypothetical protein; SPTR: C1YP35  uncharacterized protein
YP_003679635.1	InterPro IPR001387; KEGG: nfa:nfa5020  DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YP34 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003679636.1	COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310:IPR011146:IPR011151; KEGG: rer:RER_10000 HIT family protein; PFAM: histidine triad (HIT) protein; SPTR: C1YP33 HIT family hydrolase, diadenosine tetraphosphate hydrolase; PFAM: HIT domain
YP_003679637.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR001411:IPR011701:IPR016196; KEGG: fal:FRAAL3822  multidrug resistance integral membrane efflux protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YP32 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003679638.1	KEGG: bcv:Bcav_3893 hypothetical protein; SPTR: C1YP31  uncharacterized protein
YP_003679639.1	InterProIPR003012:IPR001647:IPR011075:IPR009057:IPR 004111:IPR012287; KEGG: bcv:Bcav_3892 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; SPTR: C1YP30 transcriptional regulator, tetR family; PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family
YP_003679640.1	COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: tfu:Tfu_3082 hypothetical protein; PFAM: protein of unknown function DUF156; SPTR: C1YP29 Uncharacterized conserved protein; PFAM: Uncharacterised BCR, COG1937
YP_003679641.1	COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763:IPR001307; KEGG: tcu:Tcur_2037 rhodanese domain protein; PFAM: rhodanese; SMART: Rhodanese domain protein; SPTR: C1YP28 Rhodanese-related sulfurtransferase; PFAM: protein of unknown function (DUF2892); Rhodanese-like domain
YP_003679642.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763:IPR001279; KEGG: art:Arth_3839 beta-lactamase domain-containing protein; PFAM: rhodanese; SMART: beta-lactamase; rhodanese; SPTR: C1YP27 Zn-dependent hydrolase, glyoxylase; PFAM: metallo-beta-lactamase superfamily; Rhodanese-like domain
YP_003679643.1	COGs: COG0730 permease; InterPro IPR002781; KEGG: ach:Achl_0204 protein of unknown function DUF81; PFAM: protein of unknown function DUF81; SPTR: C1YP26 Predicted permease; PFAM: Sulfite exporter TauE/SafE
YP_003679644.1	InterPro IPR000013:IPR006026; KEGG: sgr:SGR_268  secreted metalloprotease; PFAM: peptidase M7 snapalysin; SMART: peptidase metallopeptidase; SPTR: C1YP25 Matrixin/extracellular neutral proteinase (M7) family protein; PFAM: Streptomyces extracellular neutral proteinase (M7) family
YP_003679645.1	KEGG: kra:Krad_2825 hypothetical protein; SPTR: C1YP24  uncharacterized protein
YP_003679646.1	InterPro IPR011051:IPR001387:IPR010982:IPR013096; KEGG: sro:Sros_5086  XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YP23 Predicted transcriptional regulator; PFAM: Cupin domain; Helix-turn-helix
YP_003679647.1	InterPro IPR013217:IPR007061; KEGG: sgr:SGR_5793 hypothetical protein; PFAM: protein of unknown function DUF664; methyltransferase type 12; SPTR: C1YP22 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: protein of unknown function (DUF664); methyltransferase domain
YP_003679648.1	InterPro IPR016196:IPR011701; KEGG: art:Arth_3828 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YP21 Major Facilitator Superfamily transporter; PFAM: Major Facilitator Superfamily
YP_003679649.1	InterPro IPR001845:IPR011991; KEGG: nfa:nfa27680  transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: C1YP20 ArsR family transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family
YP_003679650.1	KEGG: cti:RALTA_A0727 conserved hypothetical protein; exported protein; fusion protein; SPTR: C1YP19  uncharacterized protein
YP_003679651.1	COGs: COG1651 protein-disulfide isomerase; InterPro IPR017936:IPR001853:IPR012336:IPR012335; KEGG: mgi:Mflv_0908 DsbA oxidoreductase; PFAM: DSBA oxidoreductase; SPTR: C1YP18 protein-disulfide isomerase; PFAM: DSBA-like thioredoxin domain
YP_003679652.1	COGs: COG4243 membrane protein; InterPro IPR012932; KEGG: sro:Sros_4978 membrane protein-like protein; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase; SPTR: C1YP17 Predicted membrane protein, COG4243; PFAM: Vitamin K epoxide reductase family
YP_003679653.1	COGs: COG0451 nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: sgr:SGR_6705  UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YP16 nucleoside-diphosphate-sugar epimerase; PFAM: NAD dependent epimerase/dehydratase family
YP_003679654.1	COGs: COG0463 glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: sco:SCO3742 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: C1YP15 glycosyl transferase; PFAM: glycosyl transferase family 2
YP_003679655.1	COGs: COG3222 conserved hypothetical protein; InterPro IPR018641; KEGG: sgr:SGR_6703 hypothetical protein; PFAM: protein of unknown function DUF2064; SPTR: C1YP14 Uncharacterized conserved protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2064)
YP_003679656.1	InterPro IPR013216; KEGG: sma:SAV_4571 hypothetical protein; PFAM: methyltransferase type 11; SPTR: C1YP13 methyltransferase family protein; PFAM: methyltransferase domain
YP_003679657.1	InterPro IPR000073:IPR013595; KEGG: sen:SACE_2790 secreted hydrolase; PFAM: TAP domain protein; alpha/beta hydrolase fold; SPTR: C1YP10 alpha/beta hydrolase family protein; PFAM: TAP-like protein; alpha/beta hydrolase fold
YP_003679658.1	COGs: COG5587 conserved hypothetical protein; InterPro IPR012808:IPR015996; KEGG: sro:Sros_3776 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C1YP09 Uncharacterized conserved protein; PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: conserved hypothetical protein TIGR02453
YP_003679659.1	KEGG: bra:BRADO1355 hypothetical protein; SPTR: C1YP08  uncharacterized protein
YP_003679660.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: sro:Sros_4738 MFS transporter DHA1 family; PFAM: major facilitator superfamily MFS_1; SPTR: C1YP06 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003679661.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sro:Sros_4737  TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YP05 transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003679662.1	KEGG: rop:ROP_00230 hypothetical protein; SPTR: C1AS21  uncharacterized protein
YP_003679663.1	COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter Mnhsubunit alpha; InterPro IPR003916:IPR001750:IPR007182; KEGG: jde:Jden_1913 NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); Na+/H+ antiporter Mnhsubunit beta-related protein; PRIAM: NADH dehydrogenase (quinone); SPTR: C1YP04 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, Mnhsubunit alpha; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; Domain related to Mnhsubunit beta of Na+/H+ antiporter
YP_003679664.1	COGs: COG1006 Multisubunit Na+/H+ antiporter MnhC subunit; InterPro IPR001133; KEGG: jde:Jden_1914 NADH-ubiquinone oxidoreductase chain 4L; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: C1YP03 Multisubunit Na+/H+ antiporter, MnhC subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_003679665.1	COGs: COG0651 formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR003918:IPR001750; KEGG: jde:Jden_1915 NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: C1YP02 formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_003679666.1	COGs: COG1863 Multisubunit Na+/H+ antiporter MnhE subunit; InterPro IPR002758; KEGG: saq:Sare_3454 cation antiporter; PFAM: cation antiporter; SPTR: C1YP01 Multisubunit Na+/H+ antiporter, MnhE subunit; PFAM: Na+/H+ ion antiporter subunit
YP_003679667.1	InterPro IPR007208; KEGG: cef:CE0230  PH adaptation potassium efflux system protein; PFAM: multiple resistance and pH regulation protein F; SPTR: C1YP00 Multisubunit Na+/H+ antiporter, MnhF subunit; PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF)
YP_003679668.1	COGs: COG1320 Multisubunit Na+/H+ antiporter MnhG subunit; InterPro IPR005133; KEGG: saq:Sare_3452 monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; SPTR: C1YNZ9 Monovalent cation/proton antiporter, MnhG/PhaG subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit
YP_003679669.1	KEGG: svi:Svir_04780 hypothetical protein; SPTR: C1YNZ8  uncharacterized protein; PFAM: E3 Ubiquitin ligase
YP_003679670.1	COGs: COG1024 enoyl-CoA hydratase/carnithine racemase; InterPro IPR018376:IPR001753; KEGG: fra:Francci3_2455 enoyl-CoA hydratase; PFAM: enoyl-CoA hydratase/isomerase; SPTR: C1YNZ7 Short chain enoyl-CoA hydratase; PFAM: enoyl-CoA hydratase/isomerase family
YP_003679671.1	COGs: COG1024 enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: fra:Francci3_2456 enoyl-CoA hydratase/isomerase; PFAM: enoyl-CoA hydratase/isomerase; SPTR: C1YNZ6 enoyl-CoA hydratase/carnithine racemase; PFAM: enoyl-CoA hydratase/isomerase family
YP_003679672.1	InterPro IPR016032:IPR011991; KEGG: tcu:Tcur_3448 LuxR family transcriptional regulator; SPTR: C1YNZ5  uncharacterized protein
YP_003679673.1	COGs: COG1024 enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: fra:Francci3_2457 enoyl-CoA hydratase/isomerase; PFAM: enoyl-CoA hydratase/isomerase; SPTR: C1YNZ4 enoyl-CoA hydratase/carnithine racemase; PFAM: enoyl-CoA hydratase/isomerase family
YP_003679674.1	COGs: COG3424 naringenin-chalcone synthase; InterProIPR016039:IPR011141:IPR001099:IPR012328:IPR 016038; KEGG: fra:Francci3_2458 chalcone and stilbene synthases-like; PFAM: chalcone and stilbene synthase domain protein; SPTR: C1YNZ3 Predicted naringenin-chalcone synthase; PFAM: Chalcone and stilbene synthases, N-terminal domain; Chalcone and stilbene synthases, C-terminal domain
YP_003679675.1	COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR009081:IPR020845:IPR010071:IPR001242:IPR 000873:IPR006163:IPR001031; KEGG: sen:SACE_4287  non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; thioesterase; SPTR: C1YNZ2 amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation domain protein; PFAM: phosphopantetheine attachment site; thioesterase domain; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain
YP_003679676.1	COGs: COG1167 transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR015424:IPR004839:IPR015421; KEGG: saq:Sare_2660 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; SPTR: C1YNZ1 transcriptional regulator with HTH domain and aminotransferase domain; PFAM: aminotransferase class I and II
YP_003679677.1	COGs: COG3251 conserved hypothetical protein; InterPro IPR005153; KEGG: sgr:SGR_452  MbtH-like protein; PFAM: MbtH domain protein; SPTR: C1YNZ0 Uncharacterized conserved protein; PFAM: MbtH-like protein
YP_003679678.1	InterPro IPR016196:IPR011701; KEGG: cai:Caci_8128 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: C1YNY9 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003679679.1	COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR020459:IPR009081:IPR020845:IPR010071:IPR 000873:IPR006163; KEGG: tfu:Tfu_1865 amino acid adenylation; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; SPTR: C1YNY8 amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation protein; PFAM: phosphopantetheine attachment site; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain
YP_003679680.1	COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR020845:IPR009081:IPR001242:IPR000873:IPR 010071:IPR006163; KEGG: sco:SCO3230 CDA peptide synthetase I; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; SPTR: C1YNY7 amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation domain protein; PFAM: phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain
YP_003679681.1	InterPro IPR013216; KEGG: hypothetical protein; PFAM: methyltransferase type 11; SPTR: C1YNY6 methyltransferase family protein; PFAM: methyltransferase domain
YP_003679682.1	InterPro IPR000551:IPR009061; KEGG: nml:Namu_2399 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YNY5 Predicted transcriptional regulator; PFAM: MerR family regulatory protein
YP_003679683.1	KEGG: rha:RHA1_ro01834 hypothetical protein; SPTR: C1YNY4  uncharacterized protein
YP_003679684.1	COGs: COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR002480; KEGG: sro:Sros_3775 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase class II; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: C1YNY3 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; PFAM: class-II DAHP synthetase family
YP_003679685.1	COGs: COG1021 peptide arylation protein; InterPro IPR020845:IPR000873; KEGG: sro:Sros_3774 (2,3-dihydroxybenzoyl)adenylate synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YNY2 peptide arylation enzyme; PFAM: AMP-binding enzyme; TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase
YP_003679686.1	COGs: COG0259 pyridoxamine-phosphate oxidase; InterPro IPR009002:IPR012349:IPR011576:IPR019576; KEGG: sro:Sros_3773 pyridoxal 5'-phosphate synthase; PFAM: pyridoxine 5'-phosphate oxidase dimerisation-like; pyridoxamine 5'-phosphate oxidase-related FMN-binding; PRIAM: pyridoxal 5'-phosphate synthase; SPTR: C1YNY1 pyridoxamine-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase; pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase
YP_003679687.1	COGs: COG2890 methylase of polypeptide chain release factors; InterPro IPR007848; KEGG: sro:Sros_3772 methylase of polypeptide chain release factors-like protein; PFAM: methyltransferase small; SPTR: C1YNY0 methylase of polypeptide chain release factors; PFAM: methyltransferase small domain
YP_003679688.1	InterPro IPR000412:IPR013525; KEGG: svi:Svir_35420 ABC-type multidrug transporter permease; PFAM: ABC-2 type transporter; SPTR: C1YNX9 ABC transporter; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family
YP_003679689.1	COGs: COG0842 ABC-type multidrug transporter permease; InterPro IPR000412:IPR013525; KEGG: sro:Sros_6787 ABC-2 type transporter; PFAM: ABC transporter; SPTR: C1YNX8 ABC-type multidrug transporter permease; PFAM: ABC transporter; TIGRFAM: daunorubicin resistance protein C; ABC transporter efflux protein, DrrB family
YP_003679690.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR003439:IPR017871:IPR005894:IPR003593; KEGG: sco:SCO4963 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YNX7 Daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase; PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit
YP_003679691.1	KEGG: sro:Sros_3771 hypothetical protein; SPTR: C1YNX6  uncharacterized protein; PFAM: Calcium/calmodulin dependent protein kinase II Association
YP_003679692.1	COGs: COG3208 thioesterase involved in non-ribosomal peptide biosynthesis; InterPro IPR001031; KEGG: sro:Sros_3770 pyochelin biosynthetic protein PchC; PFAM: thioesterase; SPTR: C1YNX5 Predicted thioesterase involved in non-ribosomal peptide biosynthesis; PFAM: thioesterase domain
YP_003679693.1	COGs: COG4693 oxidoreductase (NAD-binding) involved in siderophore biosynthesis; InterPro IPR016040:IPR010091:IPR000683; KEGG: sro:Sros_3769 hypothetical protein; PFAM: oxidoreductase domain protein; SPTR: C1YNX4 Thiazolinyl imide reductase; TIGRFAM: thiazolinyl imide reductase; PFAM: oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: thiazolinyl imide reductase
YP_003679694.1	InterPro IPR016040:IPR001509; KEGG: sro:Sros_3768 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YNX3 saccharopine dehydrogenase-like oxidoreductase; PFAM: saccharopine dehydrogenase
YP_003679695.1	COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR020845:IPR009081:IPR001242:IPR000873:IPR 006162:IPR013217:IPR001031:IPR006163:IPR020459:IPR010071:I PR013624; KEGG: sro:Sros_3767 pyochelin synthetase F; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; methyltransferase type 12; thioesterase; phosphopantetheine-binding; Non-ribosomal peptide synthetase; SPTR: C1YNX2 amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation protein; PFAM: phosphopantetheine attachment site; thioesterase domain; methyltransferase domain; AMP-binding enzyme; Condensation domain; Nonribosomal peptide synthase; TIGRFAM: amino acid adenylation domain
YP_003679696.1	COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR009081:IPR006162:IPR020845:IPR010071:IPR 006163:IPR001242:IPR013624:IPR000873; KEGG: sro:Sros_3766 amino acid adenylation; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Non-ribosomal peptide synthetase; SPTR: C1YNX1 amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation protein; PFAM: phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; Nonribosomal peptide synthase; TIGRFAM: amino acid adenylation domain
YP_003679697.1	COGs: COG3396 conserved hypothetical protein; InterPro IPR009078:IPR007814:IPR012347; KEGG: sro:Sros_3765 hypothetical protein; PFAM: phenylacetic acid catabolic family protein; SPTR: C1YNW8 Uncharacterized conserved protein; PFAM: Phenylacetic acid catabolic protein
YP_003679698.1	KEGG: sro:Sros_3764 hypothetical protein; SPTR: C1YNW7  uncharacterized protein
YP_003679699.1	COGs: COG0318 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: sro:Sros_3763 benzoate-coenzyme A ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YNW6 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme
YP_003679700.1	COGs: COG0147 anthranilate/para-aminobenzoate synthase component I; InterProIPR001317:IPR005801:IPR017926:IPR005802:IPR 011702:IPR006220:IPR000991:IPR006805:IPR006221:IPR015890; KEGG: sro:Sros_3761 para-aminobenzoate synthase; PFAM: chorismate binding-like; glutamine amidotransferase class-I; anthranilate synthase component I domain protein; SPTR: C1YNW5 aminodeoxychorismate synthase, subunit I; aminodeoxychorismate synthase, glutamine amidotransferase subunit; TIGRFAM: para-aminobenzoate synthase, subunit I; glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; chorismate binding enzyme; anthranilate synthase component I, N terminal region; TIGRFAM: glutamine amidotransferase or aminodeoxychorismate synthase; aminodeoxychorismate synthase, component I, bacterial clade
YP_003679701.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792:IPR016032:IPR011991; KEGG: sco:SCO1370 two component system DNA binding response regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: C1YNW4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family
YP_003679702.1	COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: fal:FRAAL3543  transcriptional regulator; PFAM: helix-turn-helix HxlR type; SPTR: C1YNW3 Predicted transcriptional regulator; PFAM: HxlR-like helix-turn-helix
YP_003679703.1	COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR013813:IPR006175; KEGG: kra:Krad_2820 endoribonuclease L-PSP; PFAM: endoribonuclease L-PSP; SPTR: C1YNW2  translation initiation inhibitor, yjgF family; PFAM: endoribonuclease L-PSP
YP_003679704.1	COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterProIPR000943:IPR013325:IPR013324:IPR014322:IPR 014284:IPR007627:IPR007624:IPR007630:IPR011991; KEGG: tfu:Tfu_1334 RNA polymerase sigma factor; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; SPTR: C1YNW1 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily
YP_003679705.1	COGs: COG1680 beta-lactamase class C and other penicillin binding protein; InterPro IPR001466:IPR012338; KEGG: sro:Sros_5013 alkaline D-peptidase; PFAM: beta-lactamase; PRIAM: serine-type D-Ala-D-Ala carboxypeptidase; SPTR: C1YNW0 Penicillin-binding protein, beta-lactamase class C; PFAM: beta-lactamase
YP_003679706.1	COGs: COG0688 phosphatidylserine decarboxylase; InterPro IPR003817; KEGG: dps:DP0234 phosphatidylserine decarboxylase, proenzyme; PFAM: phosphatidylserine decarboxylase-related; SPTR: C1YNV9 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor
YP_003679707.1	KEGG: esa:ESA_02188 hypothetical protein; SPTR: C1YNV8  uncharacterized protein
YP_003679708.1	KEGG: sro:Sros_4448 hypothetical protein; SPTR: C1YNV7  uncharacterized protein; PFAM: ribosomal protein L7/L12 C-terminal domain
YP_003679709.1	KEGG: tfu:Tfu_3081 hypothetical protein; SPTR: C1YNV6  uncharacterized protein
YP_003679710.1	COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR017936:IPR012336:IPR003782:IPR012335; KEGG: tfu:Tfu_3080 hypothetical protein; PFAM: electron transporter SCO1/SenC; SPTR: C1YNV5 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems; PFAM: SCO1/SenC
YP_003679711.1	COGs: COG2837 iron-dependent peroxidase; InterPro IPR017909:IPR006314:IPR006311; KEGG: tfu:Tfu_3078 dyp-type peroxidase; PFAM: Dyp-type peroxidase; SPTR: C1YNV4 Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase family; TIGRFAM: Tat-translocated enzyme; Dyp-type peroxidase family
YP_003679712.1	COGs: COG2847 conserved hypothetical protein; InterPro IPR007410; KEGG: tfu:Tfu_3079 hypothetical protein; PFAM: protein of unknown function DUF461; SPTR: C1YNV3 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF461)
YP_003679713.1	COGs: COG0675 transposase and inactivated derivatives; InterPro IPR010095; KEGG: sro:Sros_6879 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; SPTR: C1YNV2 transposase, IS605 OrfB family, central region; TIGRFAM: transposase, IS605 OrfB family; PFAM:  transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region
YP_003679714.1	COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625:IPR005075; KEGG: tfu:Tfu_2870  integral membrane protein; PFAM: PepSY-associated TM helix domain protein; propeptide PepSY amd peptidase M4; SPTR: C1YNV1 Uncharacterized iron-regulated membrane protein, COG3182
YP_003679715.1	InterPro IPR011701:IPR016196; KEGG: ami:Amir_3943 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: C1YNV0 Major Facilitator Superfamily transporter; PFAM: Major Facilitator Superfamily
YP_003679716.1	KEGG: ami:Amir_3942 transcriptional regulator, XRE family; SPTR: C1YNU9  uncharacterized protein
YP_003679717.1	COGs: COG1482 phosphomannose isomerase; InterPro IPR011051:IPR014710; KEGG: esa:ESA_01679 hypothetical protein; SPTR: C1YNU8 phosphomannose isomerase; TIGRFAM: mannose-6-phosphate isomerase, class I
YP_003679718.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347:IPR002198:IPR016040; KEGG: sen:SACE_4402 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YNU7  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003679719.1	KEGG: hypothetical protein; SPTR: C1YNU6  uncharacterized protein
YP_003679720.1	InterPro IPR005149:IPR011991; KEGG: saq:Sare_1537 PadR-like family transcriptional regulator; PFAM: transcriptional regulator PadR family protein; SPTR: C1YNU5 Predicted transcriptional regulator; PFAM: transcriptional regulator PadR-like family
YP_003679721.1	COGs: COG4832 conserved hypothetical protein; InterPro IPR011256:IPR008319:IPR019233; KEGG: rha:RHA1_ro00612 hypothetical protein; PFAM: protein of unknown function DUF2174-like; SPTR: C1YNU4 Uncharacterized conserved protein; PFAM: Uncharacterized conserved protein (DUF2174)
YP_003679722.1	KEGG: app:CAP2UW1_2636 2-hydroxy-3-oxopropionate reductase; SPTR: C1YNU3  uncharacterized protein
YP_003679723.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR016196:IPR011701; KEGG: sro:Sros_7073 arabinose efflux permease-like protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YNU2 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003679724.1	InterPro IPR001647:IPR009057:IPR012287; KEGG: sro:Sros_7072  TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YNU1 transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003679725.1	InterPro IPR001845:IPR018334:IPR011991; KEGG: mkm:Mkms_1492 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: C1YNU0 transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family
YP_003679726.1	COGs: COG2217 Cation transport ATPase; InterProIPR001757:IPR001366:IPR018303:IPR006404:IPR 006416:IPR008250:IPR005834; KEGG: mab:MAB_4853c cation-transporting ATPase G; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: C1YNT9 Heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting; TIGRFAM: ATPase P; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase P; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
YP_003679727.1	COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR013221:IPR004101:IPR005863:IPR000713; KEGG: sco:SCO2088 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate- D-alanyl-a lanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: C1YNT8 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-d iaminopimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
YP_003679728.1	COGs: COG0110 acetyltransferase (isoleucine patch superfamily); InterPro IPR011004:IPR018357:IPR001451; KEGG: ami:Amir_3624 hexapaptide repeat-containing transferase; SPTR: C1YNT7 acetyltransferase (isoleucine patch superfamily); PFAM: Bacterial transferase hexapeptide (three repeats)
YP_003679729.1	InterPro IPR009002:IPR019920:IPR011576; KEGG: sen:SACE_5943 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: C1YNT6 pyridoxamine 5'-phosphate oxidase; TIGRFAM:  F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme
YP_003679730.1	KEGG: fal:FRAAL0472  ATP/GTP binding protein (partial match); SPTR: C1YNT5  uncharacterized protein; PFAM: NB-ARC domain
YP_003679731.1	COGs: COG0473 isocitrate/isopropylmalate dehydrogenase; InterPro IPR011829:IPR019818:IPR001804; KEGG: sen:SACE_4608 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: Tartrate decarboxylase; SPTR: C1YNT4 Tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; TIGRFAM: tartrate dehydrogenase
YP_003679732.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: ach:Achl_0443 transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: C1YNT3 transcriptional regulator, COG0583; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_003679733.1	KEGG: mjl:Mjls_2613 anion transporter; SPTR: C1YNT2  uncharacterized protein
YP_003679734.1	COGs: COG0675 transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: mgi:Mflv_5477 IS605 family transposase OrfB; PFAM:  transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; SPTR: C1YNT1 transposase; PFAM: Helix-turn-helix domain; transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region
YP_003679735.1	InterPro IPR012336; KEGG: sro:Sros_5259 hypothetical protein; SPTR: C1YNT0  uncharacterized protein
YP_003679736.1	COGs: COG1609 transcriptional regulators; InterPro IPR000843:IPR010982:IPR001761; KEGG: sgr:SGR_6606 LacI family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: C1YNS9 LacI family transcriptional regulator; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003679737.1	KEGG: sgr:SGR_2191 hypothetical protein; SPTR: C1YNS8  uncharacterized protein
YP_003679738.1	KEGG: hypothetical protein; SPTR: C1YNS7  uncharacterized protein
YP_003679739.1	InterPro IPR013026:IPR019734:IPR011990; KEGG: sgr:SGR_2189  regulator protein; SPTR: C1YNS6  uncharacterized protein; PFAM: NB-ARC domain
YP_003679740.1	COGs: COG3629 DNA-binding transcriptional activator of the SARP family; InterProIPR016032:IPR019734:IPR001867:IPR005158:IPR 011717:IPR001440:IPR011991:IPR011990; KEGG: stp:Strop_4244 transcriptional activator domain-containing protein; PFAM: transcriptional activator domain; transcriptional regulator; hypothetical protein; TPR repeat-containing protein; SPTR: C1YNS5 DNA-binding transcriptional activator of the SARP family; PFAM: Bacterial transcriptional activator domain; transcriptional regulatory protein, C terminal; Tetratricopeptide repeat
YP_003679741.1	COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; InterPro IPR004276:IPR007235; KEGG: sgr:SGR_2676 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyltransferase 28 domain; glycosyl transferase family 28; PRIAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; SPTR: C1YNS4 UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyltransferase family 28 N-terminal domain; glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
YP_003679742.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792:IPR001789:IPR011991:IPR011006; KEGG: sen:SACE_3669  two-component system response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YNS3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003679743.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: sen:SACE_3668 two-component system sensor kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YNS2 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003679744.1	InterPro IPR003675; KEGG: sen:SACE_3667 hypothetical protein; PFAM: hypothetical protein; SPTR: C1YNS1 CAAX amino terminal protease family; PFAM: CAAX amino terminal protease family
YP_003679745.1	InterPro IPR006162; KEGG: scl:sce6226 hypothetical protein; SPTR: C1YNS0  uncharacterized protein; PFAM: protein of unknown function (DUF419)
YP_003679746.1	COGs: COG3663 G:T/U mismatch-specific DNA glycosylase; InterPro IPR005122; KEGG: sgr:SGR_6271  G/U mismatch-specific DNA glycosylase; PFAM: uracil-DNA glycosylase superfamily; SPTR: C1YNR9 G/U mismatch-specific uracil-DNA glycosylase; PFAM: uracil DNA glycosylase superfamily; TIGRFAM: mismatch-specific thymine-DNA glycosylate (mug)
YP_003679747.1	InterPro IPR012337:IPR001584:IPR009057; KEGG: sro:Sros_4349 transposase; PFAM: Integrase catalytic region; SPTR: C1YNR8 Integrase family protein; PFAM: Integrase core domain
YP_003679748.1	KEGG: rop:ROP_15210 hypothetical protein; SPTR: C1YNR7  uncharacterized protein
YP_003679749.1	InterPro IPR018966; KEGG: sro:Sros_4918 hypothetical protein; PFAM: VTC domain; SPTR: C1YNR6 VTC domain-containing protein; PFAM: VTC domain
YP_003679750.1	KEGG: sro:Sros_4919 hypothetical protein; SPTR: C1YNR5  uncharacterized protein
YP_003679751.1	COGs: COG5337 Spore coat assembly protein; InterPro IPR014867; KEGG: rop:ROP_38870 hypothetical protein; PFAM: Spore coat protein CotH; SPTR: C1YNR4 Spore coat assembly protein; PFAM: CotH protein
YP_003679752.1	COGs: COG3153 acetyltransferase; InterPro IPR000182:IPR016181; KEGG: sro:Sros_5849  acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YNR3 Predicted acetyltransferase; PFAM: acetyltransferase (GNAT) family
YP_003679753.1	COGs: COG0675 transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: sma:SAV_61 IS200-like transposase; PFAM:  transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; SPTR: C1YNR2 transposase, IS605 OrfB family, central region; TIGRFAM: transposase, IS605 OrfB family; PFAM: Helix-turn-helix domain; transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region
YP_003679754.1	COGs: COG1162 GTPase; InterPro IPR010914:IPR004881; KEGG: sgr:SGR_157 ribosome-associated GTPase; PFAM: GTPase EngC; SPTR: C1YNR1 ribosome small subunit-dependent GTPase A; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A
YP_003679755.1	KEGG: svi:Svir_14440 DNA-binding domain-containing protein, AraC-type; SPTR: C1YNR0  uncharacterized protein
YP_003679756.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR005467:IPR003660:IPR003594:IPR 009082:IPR003661; KEGG: sen:SACE_6094 PhoR- two-component system sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: C1YNQ9 Sensor protein; PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003679757.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001867:IPR001789:IPR011991:IPR011006; KEGG: sen:SACE_6095 two-component system, response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein; SPTR: C1YNQ8 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal
YP_003679758.1	COGs: COG2377 molecular chaperone distantly related to HSP70-fold metalloprotease; InterPro IPR005338; KEGG: sco:SCO7595 anhydro-N-acetylmuramic acid kinase; PFAM: protein of unknown function UPF0075; SPTR: C1YNQ7 Molecular chaperone; PFAM: Uncharacterised protein family (UPF0075)
YP_003679759.1	COGs: COG0591 Na+/proline symporter; InterPro IPR001734:IPR019900; KEGG: svi:Svir_09590 Na+/proline symporter; PFAM: Na+/solute symporter; SPTR: C1YNQ6 SSS sodium solute transporter; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Sodium:solute symporter family; TIGRFAM: SSS sodium solute transporter superfamily
YP_003679760.1	KEGG: ccs:CCNA_02920 membrane-anchored hypothetical protein; SPTR: C1YNQ5  uncharacterized protein
YP_003679761.1	COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: ami:Amir_4161 protein of unknown function DUF112 transmembrane; PFAM: protein of unknown function DUF112 transmembrane; SPTR: C1YNQ4 Uncharacterized conserved protein; PFAM: tripartite tricarboxylate transporter TctA family
YP_003679762.1	KEGG: ami:Amir_4162 hypothetical protein; SPTR: C1YNQ3  uncharacterized protein; PFAM: tripartite tricarboxylate transporter TctB family
YP_003679763.1	COGs: COG3181 conserved hypothetical protein; InterPro IPR005064; KEGG: ami:Amir_4163 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C1YNQ2 Uncharacterized conserved protein; PFAM: tripartite tricarboxylate transporter family receptor
YP_003679764.1	COGs: COG1414 transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: rha:RHA1_ro06953 transcriptional regulator; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; SPTR: C1YNQ1 transcriptional regulator, COG1414; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_003679765.1	COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: ami:Amir_4160 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: C1YNQ0 Predicted acyl-CoA transferase/carnitine dehydratase; PFAM: CoA-transferase family III
YP_003679766.1	COGs: COG0372 citrate synthase; InterPro IPR016141:IPR002020:IPR016142; KEGG: ami:Amir_4159 citrate synthase; PFAM: citrate synthase; SPTR: C1YNP9 citrate synthase; PFAM: citrate synthase
YP_003679767.1	InterPro IPR014729:IPR006016:IPR006015; KEGG: tfu:Tfu_3041  stress-inducible protein; PFAM: UspA domain protein; SPTR: C1YNP8 Universal stress protein UspA-like protein; PFAM: Universal stress protein family
YP_003679768.1	KEGG: ade:Adeh_0244 LigA; SPTR: Q2IMJ3 LigA
YP_003679769.1	InterPro IPR016196:IPR011701:IPR020827; KEGG: saq:Sare_2211 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YNP7 Sugar phosphate permease; PFAM: Major Facilitator Superfamily
YP_003679770.1	InterPro IPR001647:IPR012287:IPR011075:IPR009057; KEGG: saq:Sare_2212 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YNP6 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003679771.1	KEGG: sco:SCO4980 hypothetical protein; SPTR: C1YNP5  uncharacterized protein
YP_003679772.1	COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR011527:IPR003439:IPR003593:IPR017940; KEGG: cai:Caci_5807 ABC transporter related; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YNP4 ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain; PFAM: ABC transporter
YP_003679773.1	COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR011527:IPR003439:IPR003593; KEGG: sma:SAV_868 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YNP3 ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain; PFAM: ABC transporter
YP_003679774.1	InterPro IPR017517; KEGG: sco:SCO6238 hypothetical protein; SPTR: C1YNP2 Uncharacterized conserved protein; PFAM: MDMPI C-terminal domain; Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: uncharacterized Actinobacterial protein TIGR03083
YP_003679775.1	InterPro IPR001845:IPR011991; KEGG: sgr:SGR_4402 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: C1YNP1 transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family
YP_003679776.1	InterPro IPR004360; KEGG: msm:MSMEG_5678 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YNP0 Lactoylglutathione lyase-like lyase; PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003679777.1	InterPro IPR017520:IPR017517; KEGG: ami:Amir_2112 hypothetical protein; SPTR: C1YNN9  uncharacterized protein; PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: conserved hypothetical protein TIGR03086; uncharacterized Actinobacterial protein TIGR03083
YP_003679778.1	COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterProIPR002888:IPR001041:IPR012675:IPR016160:IPR 006058; KEGG: rop:ROP_02500 oxidoreductase iron-sulfur subunit; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; SPTR: C1YNN8 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain
YP_003679779.1	COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterProIPR016166:IPR005107:IPR016167:IPR016169:IPR 002346; KEGG: cai:Caci_2735 molybdopterin dehydrogenase FAD-binding; PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; SPTR: C1YNN7 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain
YP_003679780.1	COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR008274:IPR000674; KEGG: mkm:Mkms_0447 xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; SPTR: C1YNN6 xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
YP_003679781.1	COGs: COG3361 conserved hypothetical protein; InterPro IPR018644; KEGG: sgr:SGR_3185 hypothetical protein; PFAM: protein of unknown function DUF2071; SPTR: C1YWM5 Uncharacterized conserved protein; PFAM: Uncharacterized conserved protein (COG2071)
YP_003679782.1	COGs: COG3546 Mn-containing catalase; InterPro IPR012347:IPR007760:IPR009078; KEGG: tfu:Tfu_0886 catalase; PFAM: manganese containing catalase; PRIAM: catalase; SPTR: C1YWM4 Mn-containing catalase; PFAM: Manganese containing catalase
YP_003679783.1	COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004837; KEGG: saq:Sare_0538 sodium/calcium exchanger membrane region; PFAM: sodium/calcium exchanger membrane region; SPTR: C1YWM3 Ca2+/Na+ antiporter; PFAM: Sodium/calcium exchanger protein
YP_003679784.1	COGs: COG0622 phosphoesterase; InterPro IPR000979:IPR004843; KEGG: nfa:nfa21890  phosphoesterase; PFAM: metallophosphoesterase; SPTR: C1YWM2 phosphoesterase, MJ0936 family; TIGRFAM: phosphodiesterase, MJ0936 family; TIGRFAM: phosphoesterase, MJ0936 family
YP_003679785.1	COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: nca:Noca_1494 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: C1YWM1 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_003679786.1	COGs: COG1171 threonine dehydratase; InterPro IPR000634:IPR001926; KEGG: tcu:Tcur_1622 threonine ammonia-lyase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; SPTR: C1YWM0 threonine dehydratase; PFAM: pyridoxal-phosphate dependent enzyme
YP_003679787.1	COGs: COG0583 transcriptional regulator; InterPro IPR011991:IPR000847:IPR005119; KEGG: tfu:Tfu_1740 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: C1YWL9 transcriptional regulator, COG0583; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_003679788.1	COGs: COG2860 membrane protein; InterPro IPR005115; KEGG: mgi:Mflv_0991 hypothetical protein; PFAM: protein of unknown function UPF0126; SPTR: C1YWE6 Predicted membrane protein, COG2860; PFAM: UPF0126 domain
YP_003679789.1	COGs: COG1249 pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR013027:IPR004099:IPR000815:IPR001327:IPR 016156; KEGG: rxy:Rxyl_1765 pyridine nucleotide-disulphide oxidoreductase dimerisation region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: C1YWE5 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_003679790.1	COGs: COG2375 Siderophore-interacting protein; InterPro IPR017938:IPR013113:IPR007037:IPR017927; KEGG: sco:SCO1623 hypothetical protein; PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; SPTR: C1YWE4 Siderophore-interacting protein; PFAM: Siderophore-interacting protein; Siderophore-interacting FAD-binding domain
YP_003679791.1	COGs: COG2971 N-acetylglucosamine kinase; InterPro IPR002731; KEGG: sen:SACE_0495 ATPase, BadF/BadG/BcrA/BcrD type; PFAM: ATPase BadF/BadG/BcrA/BcrD type; SPTR: C1YWE3 Predicted N-acetylglucosamine kinase; PFAM: BadF/BadG/BcrA/BcrD ATPase family
YP_003679792.1	COGs: COG4552 acetyltransferase involved in intracellular survival and related acetyltransferase; InterPro IPR000182:IPR016181; KEGG: tfu:Tfu_2201 hypothetical protein; SPTR: C1YWE2 Predicted acetyltransferase; PFAM: acetyltransferase (GNAT) family
YP_003679793.1	COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: nfa:nfa35080  ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YWE1 ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter
YP_003679794.1	COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665:IPR006664; KEGG: tfu:Tfu_1564 outer membrane protein and related peptidoglycan-associated (LipO)proteins; PFAM: OmpA/MotB domain protein; SPTR: C1YWE0 Outer membrane protein/peptidoglycan-associated (Lipo)protein; PFAM: OmpA family
YP_003679796.1	InterPro IPR000182:IPR016181; KEGG: mno:Mnod_6355 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YWD9 acetyltransferase, N-acetylglutamate synthase; PFAM: acetyltransferase (GNAT) family
YP_003679797.1	COGs: COG4552 acetyltransferase involved in intracellular survival and related acetyltransferase; InterPro IPR016181:IPR000182; KEGG: tfu:Tfu_2201 hypothetical protein; SPTR: C1YWD8 Predicted acetyltransferase
YP_003679798.1	COGs: COG0520 Selenocysteine lyase; InterPro IPR015424:IPR000192:IPR015421; KEGG: tcu:Tcur_2385 aminotransferase class V; PFAM: aminotransferase class V; SPTR: C1YWD7 Selenocysteine lyase; PFAM: aminotransferase class-V
YP_003679799.1	COGs: COG1846 transcriptional regulators; InterPro IPR011991:IPR000835; KEGG: sen:SACE_4080 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YWD6 MarR family transcriptional regulator; PFAM: MarR family
YP_003679800.1	InterPro IPR001279; KEGG: rop:ROP_33350 hypothetical protein; SMART: beta-lactamase; SPTR: C1YWD5 Zn-dependent hydrolase, glyoxylase; PFAM: metallo-beta-lactamase superfamily
YP_003679801.1	COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR002938:IPR003042; KEGG: sen:SACE_3057 pentachlorophenol monooxygenase; PFAM: monooxygenase FAD-binding; SPTR: C1YWD4 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase (Fragment); PFAM: FAD binding domain
YP_003679802.1	COGs: COG3508 Homogentisate 1 2-dioxygenase; InterPro IPR011051:IPR005708:IPR014710; KEGG: sen:SACE_3944 homogentisate 1,2-dioxygenase; PFAM: homogentisate 12-dioxygenase; SPTR: C1YTI3 Homogentisate 1,2-dioxygenase; PFAM: homogentisate 1,2-dioxygenase; TIGRFAM: homogentisate 1,2-dioxygenase
YP_003679803.1	KEGG: rha:RHA1_ro02310 hypothetical protein; SPTR: Q0SEC0  uncharacterized protein
YP_003679804.1	COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR015377:IPR011234:IPR005959:IPR002529; KEGG: sen:SACE_3942  fumarylacetoacetase; PFAM: fumarylacetoacetate hydrolase; Domain of unknown function DUF1969; PRIAM: Fumarylacetoacetase; SPTR: C1YTI0 Fumarylacetoacetate hydrolase; TIGRFAM: fumarylacetoacetase; PFAM: Domain of unknown function (DUF1969); Fumarylacetoacetate (FAA) hydrolase family; TIGRFAM: fumarylacetoacetase
YP_003679805.1	KEGG: gbr:Gbro_4062 hypothetical protein; SPTR: C1YTH9  uncharacterized protein
YP_003679806.1	InterPro IPR009061; KEGG: gbr:Gbro_1042 DNA binding domain protein, excisionase family; SPTR: C1YTH8  uncharacterized protein
YP_003679807.1	InterPro IPR003594; KEGG: tcu:Tcur_1945  anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: C1YTH7 histidine kinase; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003679808.1	InterPro IPR010982:IPR001387; KEGG: sro:Sros_3358 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YTH6  uncharacterized protein; PFAM: Helix-turn-helix
YP_003679809.1	InterPro IPR007278; KEGG: tfu:Tfu_0262 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YTH5  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003679810.1	InterPro IPR007278; KEGG: tfu:Tfu_1657 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YTH4  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003679811.1	InterPro IPR006624; KEGG: tectonin 2; SMART: beta-propeller repeat TECPR; SPTR: C1YTH3  uncharacterized protein
YP_003679812.1	InterPro IPR013216; KEGG: fre:Franean1_1400 methyltransferase type 11; PFAM: methyltransferase type 11; SPTR: C1YTH2 methyltransferase family protein; PFAM: methyltransferase domain
YP_003679813.1	COGs: COG1278 Cold shock protein; InterProIPR016027:IPR012340:IPR002059:IPR019844:IPR 011129:IPR012156; KEGG: avn:Avin_11700 cold shock domain family protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: C1YTH1 Cold-shock DNA-binding protein family; PFAM: 'Cold-shock' DNA-binding domain
YP_003679814.1	KEGG: nml:Namu_0649 DNA polymerase III subunits gamma and tau; SPTR: C1YTH0  uncharacterized protein
YP_003679815.1	COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048:IPR019949; KEGG: rer:RER_17360 hypothetical protein; PFAM: Luciferase-like, subgroup; SPTR: C1YTG9 Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1
YP_003679816.1	KEGG: bcv:Bcav_4130 hypothetical protein; SPTR: C1YTG8  uncharacterized protein
YP_003679817.1	KEGG: bcv:Bcav_4129 hypothetical protein; SPTR: C1YTG7  uncharacterized protein
YP_003679818.1	COGs: COG3795 conserved hypothetical protein; InterPro IPR005545:IPR011008; KEGG: bcv:Bcav_4128 YCII-related protein; PFAM: YCII-related; SPTR: C1YTG6 Uncharacterized conserved protein; PFAM: YCII-related domain
YP_003679819.1	COGs: COG4941 RNA polymerase sigma factor containing a TPR repeat domain; InterProIPR013325:IPR013324:IPR007627:IPR013249:IPR 014284; KEGG: bcv:Bcav_4127  RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: C1YTG5 RNA polymerase, sigma subunit, ECF family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003679820.1	KEGG: pmr:PMI0561 hypothetical protein; SPTR: C1YTG4  uncharacterized protein
YP_003679821.1	COGs: COG0178 excinuclease ATPase; InterPro IPR017871:IPR003593:IPR003439:IPR004602; KEGG: sco:SCO0918 excinuclease ABC subunit A; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YTG3 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter; TIGRFAM: excinuclease ABC subunit A
YP_003679822.1	COGs: COG2226 methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013217; KEGG: ami:Amir_2993 methyltransferase type 12; PFAM: methyltransferase type 12; SPTR: C1YTG2 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain
YP_003679823.1	InterProIPR011051:IPR010982:IPR014710:IPR001387:IPR 013096; KEGG: sco:SCO0376 transcriptional regulator; PFAM: helix-turn-helix domain protein; cupin; SMART: helix-turn-helix domain protein; SPTR: C1YTG1 transcriptional regulator; PFAM: Cupin domain; Helix-turn-helix
YP_003679824.1	COGs: COG3899 ATPase; InterPro IPR016032:IPR011991:IPR000792; KEGG: sco:SCO5065 transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: C1YTG0 transcriptional regulator, luxR family; PFAM: Bacterial regulatory proteins, luxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003679825.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR000209; KEGG: sco:SCO5066 beta-lactamase; SPTR: C1YTF9 Zn-dependent hydrolase, glyoxylase; PFAM: metallo-beta-lactamase superfamily
YP_003679826.1	COGs: COG2272 carboxylesterase type B; InterPro IPR002018:IPR019826:IPR002168; KEGG: sco:SCO5067 carboxylesterase; PFAM: carboxylesterase type B; PRIAM: carboxylesterase; SPTR: C1YTF8 carboxylesterase type B; PFAM: carboxylesterase
YP_003679827.1	InterPro IPR001387; KEGG: sen:SACE_7058 DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YTF7 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003679828.1	COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030:IPR016040; KEGG: sen:SACE_7060 NmrA-like protein; PFAM: NmrA family protein; SPTR: C1YTF6 Predicted nucleoside-diphosphate sugar epimerase
YP_003679829.1	COGs: COG2208 serine phosphatase RsbU regulator of sigma subunit; InterProIPR013767:IPR003018:IPR010822:IPR000014:IPR 001932; KEGG: sco:SCO7759 DNA-binding protein; PFAM: stage II sporulation E family protein; GAF domain protein; PAS fold domain protein; SMART: protein phosphatase 2C domain protein; PAS domain containing protein; GAF domain protein; SPTR: C1YTF5 serine phosphatase RsbU, regulator of sigma subunit; PFAM: GAF domain; stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box
YP_003679830.1	InterPro IPR001647:IPR012287:IPR011075:IPR009057; KEGG: ach:Achl_0474 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YTF4 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003679831.1	InterPro IPR000620; KEGG: bfa:Bfae_00200 predicted permease, DMT superfamily; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C1YTF3 Predicted permease, DMT superfamily; PFAM: EamA-like transporter family
YP_003679832.1	COGs: COG4257 Streptogramin lyase; InterPro IPR011041:IPR011042:IPR011217; KEGG: sro:Sros_7528  hydrolase; SPTR: C1YTF2  uncharacterized protein
YP_003679833.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: sgr:SGR_6399 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: C1YTF1 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003679834.1	InterPro IPR011047; KEGG: tfu:Tfu_1441 pyrrolo-quinoline quinone; SPTR: C1YTF0  uncharacterized protein
YP_003679835.1	COGs: COG0329 dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220:IPR013785; KEGG: kra:Krad_2014 dihydrodipicolinate synthetase; PFAM: dihydrodipicolinate synthetase; SPTR: C1YTE9 dihydrodipicolinate synthase/N-acetylneuraminate lyase; PFAM: dihydrodipicolinate synthetase family
YP_003679836.1	KEGG: GL17329 gene product from transcript GL17329-RA; SPTR: C1YTE8  uncharacterized protein
YP_003679837.1	COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198:IPR016040:IPR002347; KEGG: fal:FRAAL2890 hypothetical protein; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YTE7  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003679838.1	COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: bfa:Bfae_22610 choline/carnitine/betaine transport; PFAM: BCCT transporter; SPTR: C1YTE6 Choline/carnitine/betaine transport; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport
YP_003679839.1	KEGG: hypothetical protein; SPTR: A8J099 Predicted protein (Fragment)
YP_003679840.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: stp:Strop_0261 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YTE5 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003679841.1	InterPro IPR002656; KEGG: stp:Strop_0262 acyltransferase; PFAM: acyltransferase; SPTR: C1YTE4 Predicted acyltransferase; PFAM: acyltransferase family
YP_003679842.1	COGs: COG1234 metal-dependent hydrolase of the beta-lactamase superfamily III; KEGG: stp:Strop_1103 beta-lactamase domain-containing protein; SPTR: C1YTE3 metal-dependent hydrolase, beta-lactamase superfamily III; PFAM: metallo-beta-lactamase superfamily
YP_003679843.1	COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR013611:IPR017871:IPR003593; KEGG: ttj:TTHA0975 sugar ABC transporter ATP-binding protein; PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; SPTR: C1YTE2 ABC-type spermidine/putrescine transporter ATPase component; PFAM: ABC transporter
YP_003679844.1	COGs: COG1177 ABC-type spermidine/putrescine transport system permease II; InterPro IPR000515; KEGG: azc:AZC_0784  permease; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YTE1 ABC-type spermidine/putrescine transport system, permease II; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003679845.1	COGs: COG0555 ABC-type sulfate transporter permease component; InterPro IPR000515; KEGG: bpr:GBP346_A1438 ABC transporter permease protein; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YTE0 ABC-type sulfate transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003679846.1	COGs: COG1840 ABC-type Fe3+ transporter periplasmic component; InterPro IPR006059; KEGG: psb:Psyr_4695 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: C1YTD9 ABC-type Fe3+ transporter periplasmic component; PFAM: Bacterial extracellular solute-binding protein
YP_003679847.1	COGs: COG1609 transcriptional regulators; InterPro IPR000843:IPR001761:IPR010982; KEGG: bcv:Bcav_2844 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: C1YTD8 transcriptional regulator; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003679848.1	COGs: COG3795 conserved hypothetical protein; InterPro IPR005545:IPR011008; KEGG: sen:SACE_6259 hypothetical protein; PFAM: YCII-related; SPTR: C1YTD7 Uncharacterized conserved protein; PFAM: YCII-related domain
YP_003679849.1	COGs: COG4941 RNA polymerase sigma factor containing a TPR repeat domain; InterProIPR013324:IPR013249:IPR013325:IPR014284:IPR 007627; KEGG: rop:ROP_49580 RNA polymerase ECF-type sigma factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: C1YTD6 RNA polymerase, sigma subunit, ECF family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003679850.1	InterPro IPR016130; KEGG: cai:Caci_5073 protein tyrosine/serine phosphatase; SPTR: C1YTD5 protein tyrosine/serine phosphatase
YP_003679851.1	COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030:IPR016040; KEGG: kra:Krad_0137 NmrA family protein; PFAM: NmrA family protein; SPTR: C1YTC6 Predicted nucleoside-diphosphate sugar epimerase; PFAM: NmrA-like family
YP_003679852.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: ami:Amir_5792 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YTC5 transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003679853.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002198:IPR002347; KEGG: mva:Mvan_5573 short chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YTC4  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003679854.1	COGs: COG1609 transcriptional regulators; InterPro IPR000843:IPR001761:IPR010982; KEGG: ami:Amir_5102 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: C1YTC3 LacI family transcriptional regulator; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003679855.1	COGs: COG1176 ABC-type spermidine/putrescine transport system permease I; InterPro IPR000515; KEGG: efa:EF1218 spermidine/putrescine ABC transporter permease; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YTC2 ABC-type spermidine/putrescine transporter permease I; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003679856.1	COGs: COG1177 ABC-type spermidine/putrescine transport system permease II; InterPro IPR000515; KEGG: bbe:BBR47_56870 ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YTC1 ABC-type spermidine/putrescine transporter permease II; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003679857.1	COGs: COG0675 transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: sma:SAV_61 IS200-like transposase; PFAM:  transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; SPTR: C1YTC0 transposase, IS605 OrfB family, central region; TIGRFAM: transposase, IS605 OrfB family; PFAM: Helix-turn-helix domain; transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region
YP_003679858.1	COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterProIPR017871:IPR013611:IPR008995:IPR003593:IPR 003439; KEGG: cai:Caci_7452 spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; SPTR: C1YTB9 ABC-type spermidine/putrescine transporter ATPase component; PFAM: ABC transporter; TOBE domain
YP_003679859.1	COGs: COG0687 Spermidine/putrescine-binding periplasmic protein; InterPro IPR006059; KEGG: jan:Jann_3234 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: C1YTB8 Spermidine/putrescine-binding periplasmic protein; PFAM: Bacterial extracellular solute-binding protein
YP_003679860.1	COGs: COG1957 inosine-uridine nucleoside N-ribohydrolase; InterPro IPR001910; KEGG: pde:Pden_4001 purine nucleosidase; PFAM: inosine/uridine-preferring nucleoside hydrolase; SPTR: C1YTB7 inosine-uridine nucleoside N-ribohydrolase; PFAM: inosine-uridine preferring nucleoside hydrolase
YP_003679861.1	COGs: COG1001 adenine deaminase; InterPro IPR006680:IPR011059; KEGG: gym:GYMC10_6021 adenine deaminase; PFAM: amidohydrolase; PRIAM: adenine deaminase; SPTR: C1YTB6 adenine deaminase; PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase
YP_003679862.1	InterPro IPR001647:IPR012287:IPR011075:IPR009057; KEGG: kse:Ksed_05420 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YTB5 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003679863.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterProIPR016161:IPR012394:IPR015590:IPR016160:IPR 016162; KEGG: sma:SAV_1187 aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase; SPTR: C1YTD4 NAD-dependent aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase family
YP_003679864.1	COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883:IPR014241; KEGG: tfu:Tfu_1016 cytochrome-c oxidase; PFAM: cytochrome C oxidase subunit I; PRIAM: cytochrome-c oxidase; SPTR: C1YTD3 cytochrome C oxidase subunit I; TIGRFAM: cytochrome C oxidase subunit I; PFAM: cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome C oxidase subunit I
YP_003679865.1	COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR011330:IPR002509; KEGG: tfu:Tfu_1621 xylanase/chitin deacetylase; PFAM: polysaccharide deacetylase; SPTR: C1YTD2 Predicted xylanase/chitin deacetylase; PFAM: polysaccharide deacetylase
YP_003679866.1	KEGG: sro:Sros_2937 hypothetical protein; SPTR: C1YTD1  uncharacterized protein
YP_003679867.1	InterPro IPR016125; KEGG: sgr:SGR_804 hypothetical protein; SPTR: C1YTD0  uncharacterized protein
YP_003679868.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016161:IPR015590:IPR016162:IPR016160; KEGG: mva:Mvan_1643 aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase; SPTR: C1YTC9 delta-1-piperideine-6-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase family
YP_003679869.1	COGs: COG1846 transcriptional regulators; InterPro IPR011991:IPR000835; KEGG: sen:SACE_0188 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YTC8 MarR family transcriptional regulator; PFAM: MarR family
YP_003679870.1	COGs: COG1764 redox protein regulator of disulfide bond formation; InterPro IPR015946:IPR003718:IPR019953; KEGG: mjl:Mjls_1204 OsmC family protein; PFAM: OsmC family protein; SPTR: C1YTC7 Predicted redox protein, regulator of disulfide bond formation; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, Ohr subfamily
YP_003679871.1	COGs: COG1966 carbon starvation protein predicted membrane protein; InterPro IPR003706; KEGG: sen:SACE_1515 carbon starvation protein CstA; PFAM: carbon starvation protein CstA; SPTR: C1YW42 carbon starvation protein, predicted membrane protein; PFAM: carbon starvation protein CstA
YP_003679872.1	InterPro IPR007423; KEGG: sen:SACE_1514 hypothetical protein; PFAM: protein of unknown function DUF466; SPTR: C1YW41  uncharacterized protein; PFAM: protein of unknown function (DUF466)
YP_003679873.1	COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644:IPR002550; KEGG: tfu:Tfu_1686 CBS; PFAM: protein of unknown function DUF21; hypothetical protein; SMART: hypothetical protein; SPTR: C1YW40 CBS domain-containing protein; PFAM: CBS domain; Domain of unknown function DUF21
YP_003679874.1	COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644:IPR002550:IPR005170; KEGG: tfu:Tfu_1685 CBS; PFAM: protein of unknown function DUF21; hypothetical protein; transporter-associated region; SMART: hypothetical protein; SPTR: C1YW39 CBS domain-containing protein; PFAM: CBS domain; Domain of unknown function DUF21; transporter associated domain
YP_003679875.1	COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: tfu:Tfu_1684 tRNA/rRNA methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: C1YW38 rRNA methylase; PFAM: SpoU rRNA methylase family
YP_003679876.1	COGs: COG2813 16S RNA G1207 methylase RsmC; InterPro IPR007848; KEGG: tfu:Tfu_1683 16S rRNA m(2)G 1207 methyltransferase; PFAM: methyltransferase small; SPTR: C1YW37 16S RNA G1207 methylase RsmC; PFAM: methyltransferase small domain
YP_003679877.1	InterPro IPR015035:IPR015057; KEGG: tfu:Tfu_1962 hypothetical protein; PFAM: Domain of unknown function DUF1918; Domain of unknown function DUF1876; SPTR: C1YW36  uncharacterized protein; PFAM: Domain of unknown function (DUF1876); Domain of unknown function (DUF1918)
YP_003679878.1	COGs: COG0531 amino acid transporter; InterPro IPR004841:IPR002293; KEGG: mbt:JTY_2011  integral membrane protein; PFAM: amino acid permease-associated region; SPTR: C1YW35 amino acid transporter; PFAM: amino acid permease
YP_003679879.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: kra:Krad_2619 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YW34 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003679880.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: sco:SCO0240 oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YW33  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003679881.1	InterPro IPR000551:IPR009061; KEGG: sma:SAV_85 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YW32 Predicted transcriptional regulator; PFAM: MerR family regulatory protein
YP_003679882.1	COGs: COG2312 Erythromycin esterase homolog; InterPro IPR014622:IPR007815; KEGG: sma:SAV_84 hypothetical protein; PFAM: Erythromycin esterase; SPTR: C1YW31 Erythromycin esterase-like enzyme; PFAM: Erythromycin esterase
YP_003679883.1	InterPro IPR015797:IPR000086:IPR020084:IPR020476; KEGG: tfu:Tfu_1680 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: C1YW30 ADP-ribose pyrophosphatase; PFAM: NUDIX domain
YP_003679884.1	COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834:IPR006439:IPR005833; KEGG: tfu:Tfu_1679 HAD family hydrolase; PFAM: haloacid dehalogenase; SPTR: C1YW29 Haloacid dehalogenase superfamily enzyme, subfamily IA; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_003679885.1	InterPro IPR002035; KEGG: tfu:Tfu_1678 von Willebrand factor, type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: C1YW28 Mg-chelatase subunit ChlD; PFAM: von Willebrand factor type A domain
YP_003679886.1	COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: tfu:Tfu_1677 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: C1YW27 Uncharacterized conserved protein; PFAM: protein of unknown function DUF58
YP_003679887.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR011703:IPR016366; KEGG: tfu:Tfu_1676 MoxR-like ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: C1YW26 MoxR-like ATPase; PFAM: ATPase family associated with various cellular activities (AAA)
YP_003679888.1	KEGG: tcu:Tcur_2380 hypothetical protein; SPTR: C1YW25  uncharacterized protein
YP_003679889.1	KEGG: sgr:SGR_6214 hypothetical protein; SPTR: C1YW24  uncharacterized protein
YP_003679890.1	KEGG: sco:SCO1348 hypothetical protein; SPTR: B4VCQ0  uncharacterized protein; PFAM: protein of unknown function (DUF3037)
YP_003679891.1	COGs: COG2814 Arabinose efflux permease; InterProIPR016196:IPR011701:IPR005829:IPR004812:IPR 001958; KEGG: tfu:Tfu_1734 Bcr/CflA subfamily drug resistance transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YW21 Drug resistance transporter Bcr/CflA subfamily; TIGRFAM: drug resistance transporter Bcr/CflA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter Bcr/CflA subfamily; Multidrug resistance protein
YP_003679892.1	COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: tfu:Tfu_1733  acyl-CoA synthetase, long-chain-fatty acid:CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YW20 AMP-forming long-chain acyl-CoA synthetase; PFAM: AMP-binding enzyme
YP_003679893.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR011006:IPR016032:IPR011991:IPR001789:IPR 000792; KEGG: sgr:SGR_5299  two-component system response regulator; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; SPTR: C1YW19 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003679894.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: tcu:Tcur_4728 histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YW18 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003679895.1	KEGG: hypothetical protein LOC679057; SPTR: C1YW17  uncharacterized protein
YP_003679896.1	InterPro IPR018958; KEGG: tfu:Tfu_1731 hypothetical protein; PFAM: cell wall assembly/cell proliferation coordinating protein, KNR4-like; SPTR: Q47P53  uncharacterized protein
YP_003679897.1	COGs: COG0242 N-formylmethionyl-tRNA deformylase; InterPro IPR000181; KEGG: tfu:Tfu_1726 peptide deformylase; PFAM: formylmethionine deformylase; PRIAM: peptide deformylase; SPTR: Q47P58 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: polypeptide deformylase; TIGRFAM: peptide deformylase
YP_003679898.1	COGs: COG0328 ribonuclease HI; InterPro IPR012337:IPR002156; KEGG: lch:Lcho_1970 ribonuclease H; PFAM: ribonuclease H; SPTR: C1YN64 RNase HI; PFAM: RNase H
YP_003679899.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR009061:IPR000551:IPR015358:IPR010211; KEGG: sti:Sthe_0400 transcriptional regulator, MerR family; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YN63 Redox-sensitive transcriptional activator SoxR; TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: redox-sensitive transcriptional activator SoxR
YP_003679900.1	contains an N-terminal double-glycine peptidase domain protein; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003439; KEGG: cgt:cgR_1494 hypothetical protein; SPTR: C1YN62  uncharacterized protein
YP_003679901.1	COGs: COG4427 conserved hypothetical protein; InterPro IPR011200; KEGG: stp:Strop_1455 hypothetical protein; PFAM: protein of unknown function UCP012608; SPTR: C1YN61 Uncharacterized conserved protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2332)
YP_003679902.1	COGs: COG1816 adenosine deaminase; InterPro IPR006330:IPR001365; KEGG: sma:SAV_5577 adenosine deaminase; PFAM: adenosine/AMP deaminase; PRIAM: adenosine deaminase; SPTR: C1YN60 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; TIGRFAM: adenosine deaminase
YP_003679903.1	InterPro IPR018649; KEGG: bcv:Bcav_0101 hypothetical protein; PFAM: protein of unknown function DUF2078, membrane; SPTR: C1YN59 Predicted membrane protein (DUF2078); PFAM: Predicted membrane protein (DUF2078)
YP_003679904.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: tcu:Tcur_0111 histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C1YN58 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003679905.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR011006:IPR016032:IPR011991:IPR001789:IPR 000792; KEGG: sco:SCO1070 two component system response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YN57 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003679906.1	COGs: COG0520 Selenocysteine lyase; InterProIPR020578:IPR015422:IPR015424:IPR000192:IPR 015421; KEGG: tcu:Tcur_4802 aminotransferase class V; PFAM: aminotransferase class V; SPTR: C1YN56 Selenocysteine lyase; PFAM: aminotransferase class-V
YP_003679907.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR009061:IPR000551; KEGG: bcv:Bcav_1629 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YN55  uncharacterized protein; PFAM: MerR family regulatory protein
YP_003679908.1	InterPro IPR002931; KEGG: bcv:Bcav_1630 transglutaminase domain protein; PFAM: transglutaminase; SPTR: C1YN54 transglutaminase-like superfamily protein; PFAM: transglutaminase-like superfamily
YP_003679909.1	SPTR: C1YN53  uncharacterized protein
YP_003679910.1	COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR002938:IPR003042; KEGG: sen:SACE_1728 monooxygenase, FAD-binding; PFAM: monooxygenase FAD-binding; SPTR: C1YN52 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain
YP_003679911.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sen:SACE_1729 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YN51 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003679912.1	COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR008978:IPR002068; KEGG: mav:MAV_2721 18 kDa antigen 2; PFAM: heat shock protein Hsp20; SPTR: C1YN50 Molecular chaperone (Small heat shock protein); PFAM: Hsp20/alpha crystallin family
YP_003679913.1	COGs: COG1893 Ketopantoate reductase; InterPro IPR016040:IPR013332; KEGG: ami:Amir_3712 Ketopantoate reductase ApbA/PanE domain protein; PFAM: Ketopantoate reductase; SPTR: C1YN48 Ketopantoate reductase; PFAM: Ketopantoate reductase PanE/ApbA; TIGRFAM: 2-dehydropantoate 2-reductase
YP_003679914.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: ami:Amir_3711 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YN47 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003679915.1	SPTR: C1YN46  uncharacterized protein
YP_003679916.1	COGs: COG0520 Selenocysteine lyase; InterPro IPR015424:IPR000192:IPR015421; KEGG: stp:Strop_1799 aminotransferase, class V; PFAM: aminotransferase class V; SPTR: C1YN44 Selenocysteine lyase; PFAM: aminotransferase class-V
YP_003679917.1	InterPro IPR011009:IPR002575; KEGG: fre:Franean1_1591 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: C1YN43 phosphotransferase family protein; PFAM: phosphotransferase enzyme family
YP_003679918.1	InterPro IPR011991:IPR000835; KEGG: sro:Sros_2316 transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YN42 transcriptional regulator; PFAM: MarR family
YP_003679919.1	COGs: COG1289 membrane protein; InterPro IPR001588; KEGG: sgr:SGR_1065  integral membrane protein; SPTR: C1YN41 Predicted membrane protein, COG1289
YP_003679920.1	InterPro IPR001845:IPR011991; KEGG: sco:SCO1703 transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: C1YN40 ArsR family transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family
YP_003679921.1	KEGG: hypothetical protein LOC100266772; SPTR: C1YN39  uncharacterized protein
YP_003679922.1	COGs: COG2890 methylase of polypeptide chain release factors; InterPro IPR007848:IPR004556; KEGG: sen:SACE_3698 HemK family modification methylase; PFAM: methyltransferase small; SPTR: C1YN38  methylase of HemK family; TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small domain; TIGRFAM: HemK family  methylases
YP_003679923.1	COGs: COG1234 metal-dependent hydrolase of the beta-lactamase superfamily III; InterPro IPR001279; KEGG: tfu:Tfu_1526 ribonuclease Z; SPTR: C1YN37 RNAse Z; PFAM: metallo-beta-lactamase superfamily; TIGRFAM: ribonuclease Z
YP_003679924.1	COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR000760; KEGG: cai:Caci_5152 inositol monophosphatase; PFAM: inositol monophosphatase; SPTR: C1YN36 inositol monophosphatase/fructose-1,6-bisphosphatase family protein; PFAM: inositol monophosphatase family
YP_003679925.1	InterPro IPR004370; KEGG: sco:SCO4682 tautomerase; PFAM: 4-oxalocrotonate tautomerase; SPTR: C1YN35 Uncharacterized protein, 4-oxalocrotonate tautomerase; PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme
YP_003679926.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002198:IPR002347; KEGG: sco:SCO4681 short chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YN34  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003679927.1	InterPro IPR001387; KEGG: sco:SCO4680 DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YN33 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003679928.1	COGs: COG3173 aminoglycoside phosphotransferase; InterPro IPR011009:IPR002575; KEGG: stp:Strop_0209 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: C1YN32 Predicted aminoglycoside phosphotransferase; PFAM: phosphotransferase enzyme family
YP_003679929.1	COGs: COG2764 conserved hypothetical protein; InterPro IPR004360; KEGG: hoh:Hoch_4755 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YN31 Uncharacterized conserved protein; PFAM: 3-demethylubiquinone-9 3-methyltransferase
YP_003679930.1	COGs: COG2378 transcriptional regulator protein; InterPro IPR013196:IPR001034:IPR011991:IPR018356; KEGG: sro:Sros_5244 DeoR family transcriptional regulator; PFAM: Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; SPTR: C1YN30 Predicted transcriptional regulator, COG2378; PFAM: HTH domain
YP_003679931.1	COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR002523:IPR004488; KEGG: sgr:SGR_5836  ion transporter; PFAM: Mg2 transporter protein CorA family protein; SPTR: C1YN29 Magnesium Mg(2+) and cobalt Co(2+) transporter CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transporter (corA)
YP_003679932.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sma:SAV_82 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YN28 transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003679933.1	InterPro IPR013830; KEGG: sco:SCO0604 hypothetical protein; SPTR: C1YN27  uncharacterized protein
YP_003679934.1	COGs: COG1656 conserved hypothetical protein; InterPro IPR002782; KEGG: sma:SAV_3291 hypothetical protein; PFAM: protein of unknown function DUF82; SPTR: C1YN26 Uncharacterized conserved protein; PFAM: protein of unknown function DUF82
YP_003679935.1	COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048; KEGG: sma:SAV_3243 FMNH2-utilizing oxygenase; PFAM: Luciferase-like, subgroup; SPTR: C1YN25 Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like monooxygenase
YP_003679936.1	KEGG: sen:SACE_4371 hypothetical protein; SPTR: C1YN24  uncharacterized protein
YP_003679937.1	COGs: COG2258 conserved hypothetical protein; InterPro IPR005302:IPR011037:IPR015808; KEGG: sgr:SGR_1554 hypothetical protein; PFAM: MOSC domain containing protein; SPTR: C1YN23 Uncharacterized conserved protein; PFAM: MOSC domain
YP_003679938.1	KEGG: sro:Sros_0558 hypothetical protein; SPTR: C1YN22  uncharacterized protein
YP_003679939.1	COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: sgr:SGR_6087 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YN21 Predicted nucleoside-diphosphate sugar epimerase; PFAM: NmrA-like family
YP_003679940.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR016166:IPR016164:IPR016167:IPR006094:IPR 004113; KEGG: sen:SACE_3889 FAD-binding oxidoreductase; PFAM: FAD linked oxidase domain protein; SPTR: C1YN20 FAD/FMN-dependent dehydrogenase; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase subunit GlcD
YP_003679941.1	KEGG: cai:Caci_1738 hypothetical protein; SPTR: C1YN19  uncharacterized protein
YP_003679942.1	COGs: COG1167 transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterProIPR015424:IPR011991:IPR015421:IPR000524:IPR 004839; KEGG: sgr:SGR_5946 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; SPTR: C1YN18 transcriptional regulator with HTH domain and aminotransferase domain; PFAM: aminotransferase class I and II; Bacterial regulatory proteins, gntR family
YP_003679943.1	InterPro IPR000620; KEGG: sma:SAV_6751 integral membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C1YN17 integral membrane protein DUF6; PFAM: EamA-like transporter family
YP_003679944.1	COGs: COG0406 fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: sma:SAV_3483 phosphoglycerate mutase; PFAM: phosphoglycerate mutase; SPTR: C1YN16 fructose-2,6-bisphosphatase; PFAM: phosphoglycerate mutase family
YP_003679945.1	COGs: COG0693  intracellular protease/amidase; InterPro IPR006286:IPR002818; KEGG: rop:ROP_55790  PfpI family peptidase; PFAM: ThiJ/PfpI domain protein; SPTR: C1YN15 Intracellular protease PfpI family; TIGRFAM: intracellular protease PfpI family; PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease PfpI family
YP_003679946.1	KEGG: krh:KRH_05460 hypothetical protein; SPTR: C1YN14  uncharacterized protein
YP_003679947.1	COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: svi:Svir_14380 SNF family Na+-dependent transporter; PFAM: sodium:neurotransmitter symporter; SPTR: C1YN13 transporter; PFAM: Sodium:neurotransmitter symporter family
YP_003679948.1	COGs: COG1741 Pirin-related protein; InterPro IPR011051:IPR003829:IPR008778:IPR012093; KEGG: sen:SACE_3940  pirin; PFAM: pirin; SPTR: C1YN12 Pirin-related protein; PFAM: Pirin C-terminal cupin domain; Pirin
YP_003679949.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683:IPR004104; KEGG: tfu:Tfu_1721  oxidoreductase; PFAM: oxidoreductase domain protein; oxidoreductase domain; SPTR: C1YN11 Predicted dehydrogenase; PFAM: oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase family, C-terminal alpha/beta domain
YP_003679950.1	InterPro IPR009334; KEGG: tfu:Tfu_1720 hypothetical protein; PFAM: protein of unknown function DUF993; SPTR: C1YN10  uncharacterized protein; PFAM: protein of unknown function (DUF993)
YP_003679951.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR013022:IPR012307; KEGG: tfu:Tfu_1719 hypothetical protein; PFAM: xylose isomerase; SPTR: C1YN09 Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel
YP_003679952.1	COGs: COG0329 dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220:IPR013785; KEGG: tfu:Tfu_1718 5-dehydro-4-deoxyglucarate dehydratase; PFAM: dihydrodipicolinate synthetase; SPTR: C1YN08 dihydrodipicolinate synthase/N-acetylneuraminate lyase; PFAM: dihydrodipicolinate synthetase family
YP_003679953.1	COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342:IPR018110; KEGG: tfu:Tfu_1717  racemase; PFAM: mandelate racemase/muconate lactonizing protein; SPTR: C1YN07 Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase; PFAM: mandelate racemase / muconate lactonizing enzyme, C-terminal domain; mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YP_003679954.1	KEGG: tfu:Tfu_1175 hypothetical protein; SPTR: C1YN06  uncharacterized protein; PFAM: protein of Unknown function (DUF2784)
YP_003679955.1	InterPro IPR010497:IPR000073:IPR016292:IPR000639; KEGG: fre:Franean1_4152 epocide hydrolase domain-containing protein; PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; PRIAM: Microsomal epoxide hydrolase; SPTR: C1YN05 alpha/beta hydrolase family protein, epoxide hydrolase; PFAM: alpha/beta hydrolase fold; Epoxide hydrolase N terminus
YP_003679956.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792:IPR001789:IPR011991:IPR011006; KEGG: sro:Sros_4219 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YN04 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003679957.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: sro:Sros_4218 signal transduction histidine kinase-like protein; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C1YN03 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase
YP_003679958.1	KEGG: sro:Sros_4217 hypothetical protein; SPTR: C1YN02  uncharacterized protein
YP_003679959.1	InterPro IPR013216; KEGG: sen:SACE_7340 methyltransferase type 12; PFAM: methyltransferase type 11; SPTR: C1YN01 methyltransferase family protein; PFAM: methyltransferase domain
YP_003679960.1	InterPro IPR011051:IPR001387:IPR013096:IPR014710; KEGG: sen:SACE_7342 XRE family transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YN00 Predicted transcriptional regulator; PFAM: Cupin domain; Helix-turn-helix
YP_003679961.1	COGs: COG1609 transcriptional regulators; InterPro IPR010982:IPR000843:IPR001761; KEGG: tfu:Tfu_1710 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: C1YMZ9 LacI family transcriptional regulator; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003679962.1	COGs: COG0451 nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: tfu:Tfu_1709 UDP-glucose-4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YMZ8 nucleoside-diphosphate-sugar epimerase; PFAM: NAD dependent epimerase/dehydratase family
YP_003679963.1	KEGG: tfu:Tfu_1708 hypothetical protein; SPTR: C1YMZ7  uncharacterized protein
YP_003679964.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683; KEGG: tfu:Tfu_1707  oxidoreductase; PFAM: oxidoreductase domain protein; SPTR: C1YMZ6 Predicted dehydrogenase; PFAM: oxidoreductase family, NAD-binding Rossmann fold
YP_003679965.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683:IPR004104; KEGG: tfu:Tfu_1705  oxidoreductase; PFAM: oxidoreductase domain protein; oxidoreductase domain; SPTR: C1YMZ5 Predicted dehydrogenase; PFAM: oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase family, C-terminal alpha/beta domain
YP_003679966.1	COGs: COG1175 ABC-type sugar transporters permease components; InterPro IPR000515; KEGG: tfu:Tfu_1704  transporter permease ABC transporter protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YMZ4 carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003679967.1	COGs: COG0395 ABC-type sugar transporter permease component; InterPro IPR000515; KEGG: tfu:Tfu_1703  transporter permease ABC transporter protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YMZ3 carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003679968.1	COGs: COG1653 ABC-type sugar transporter periplasmic component; InterPro IPR006059; KEGG: tfu:Tfu_1702 sugar-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: C1YMZ2 carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein
YP_003679969.1	COGs: COG5006 permease DMT superfamily protein; InterPro IPR000620; KEGG: tfu:Tfu_1625 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C1YMZ1 Predicted permease, DMT superfamily; PFAM: EamA-like transporter family
YP_003679970.1	COGs: COG1247 Sortase and related acyltransferase; InterPro IPR000182:IPR016181; KEGG: kra:Krad_3936 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; PRIAM: phosphinothricin acetyltransferase; SPTR: C1YMZ0 Sortase-like acyltransferase; PFAM: acetyltransferase (GNAT) family
YP_003679971.1	InterPro IPR011051:IPR001387:IPR014710:IPR013096; KEGG: reu:Reut_B5130 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YMY9 Predicted transcriptional regulator; PFAM: Cupin domain; Helix-turn-helix
YP_003679972.1	InterPro IPR011009:IPR002575; KEGG: sgr:SGR_3981 hypothetical protein; PFAM: aminoglycoside phosphotransferase; SPTR: C1YMY8 phosphotransferase family protein; PFAM: phosphotransferase enzyme family
YP_003679973.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683; KEGG: bcv:Bcav_3922 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: C1YMY7 Predicted dehydrogenase; PFAM: oxidoreductase family, NAD-binding Rossmann fold
YP_003679974.1	COGs: COG1335 amidase related to nicotinamidase; InterPro IPR000868; KEGG: mpo:Mpop_4313 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: C1YMY6 nicotinamidase-like amidase; PFAM: isochorismatase family
YP_003679975.1	COGs: COG4977 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterProIPR018062:IPR002818:IPR000005:IPR018060:IPR 009057; KEGG: sco:SCO2329 transcriptional regulator; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C1YMY5 transcriptional regulator, AraC family with amidase-like domain; PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003679976.1	COGs: COG0334 glutamate dehydrogenase/leucine dehydrogenase; InterProIPR016040:IPR014362:IPR006096:IPR006097:IPR 006095; KEGG: sgr:SGR_2604 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; PRIAM: glutamate dehydrogenase (NADP(+)); SMART: Glu/Leu/Phe/Val dehydrogenase; SPTR: C1YMY4 glutamate dehydrogenase (NADP); PFAM: glutamate/Leucine/phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
YP_003679977.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: msm:MSMEG_4079  hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YMY3 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003679978.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: tfu:Tfu_1674  oxidoreductase; PFAM: aldo/keto reductase; SPTR: C1YMY2 Predicted oxidoreductase similar to aryl-alcohol dehydrogenase; PFAM: Aldo/keto reductase family
YP_003679979.1	InterPro IPR000073; KEGG: nfa:nfa43030 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: C1YMY1 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003679980.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR009061; KEGG: fre:Franean1_0374 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YMY0 Predicted transcriptional regulator; PFAM: MerR family regulatory protein
YP_003679981.1	InterPro IPR008963:IPR004843; KEGG: oih:OB0802 hypothetical protein; PFAM: metallophosphoesterase; SPTR: C1YMX9 phosphodiesterase/alkaline phosphatase D; PFAM: Calcineurin-like phosphoesterase
YP_003679982.1	InterPro IPR004360; KEGG: pjd:Pjdr2_2516 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YMX8 Uncharacterized conserved protein; PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003679983.1	COGs: COG4977 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterProIPR009057:IPR012287:IPR002818:IPR000005:IPR 018062:IPR018060; KEGG: ami:Amir_3331 transcriptional regulator, AraC family; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C1YMX7 AraC family transcriptional regulator with amidase-like domain; PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003679984.1	InterPro IPR011051:IPR000595:IPR013096; KEGG: sro:Sros_5232 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: C1YMX6 Cupin domain-containing protein; PFAM: Cupin domain
YP_003679985.1	COGs: COG3506 conserved hypothetical protein; InterPro IPR009784; KEGG: sma:SAV_6390 hypothetical protein; PFAM: protein of unknown function DUF1349; SPTR: C1YMX5 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF1349)
YP_003679986.1	InterPro IPR009002:IPR011576; KEGG: hmu:Hmuk_1091 pyridoxamine 5'-phosphate oxidase-related FMN-binding; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: C1YMX4 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase
YP_003679987.1	KEGG: hypothetical protein ; K08853 AP2-associated kinase; SPTR: C1YMX3  uncharacterized protein
YP_003679988.1	InterPro IPR000182:IPR016181; KEGG: cms:CMS_2073  acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YMX2 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003679989.1	COGs: COG2226 methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013217; KEGG: sma:SAV_3171 methyltransferase; PFAM: methyltransferase type 12; SPTR: C1YMX1 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain
YP_003679990.1	KEGG: aeh:Mlg_1901 GrpE protein; SPTR: C1YMX0  uncharacterized protein
YP_003679991.1	InterPro IPR011067:IPR003477; KEGG: mbt:JTY_1533 hypothetical protein; PFAM: PemK family protein; SPTR: C1YMW9 Growth inhibitor; PFAM: PemK-like protein
YP_003679992.1	InterProIPR011075:IPR009057:IPR012287:IPR001647:IPR 004111; KEGG: sen:SACE_3223 TetR family transcriptional regulator; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; SPTR: C1YMW8 TetR family transcriptional regulator; PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family
YP_003679993.1	COGs: COG0178 excinuclease ATPase; InterPro IPR003439:IPR017871:IPR010916:IPR003593; KEGG: ami:Amir_3531 ABC transporter related; PFAM: ABC transporter; SPTR: C1YMW7 excinuclease ATPase subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC subunit A
YP_003679994.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR003439:IPR005895:IPR003593; KEGG: sro:Sros_1506 ABC transporter related protein; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YMW6 Heme ABC exporter, ATP-binding protein CcmA; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter; TIGRFAM: heme ABC exporter, ATP-binding protein CcmA
YP_003679995.1	KEGG: sro:Sros_1505 hypothetical protein; SPTR: C1YMW5  uncharacterized protein
YP_003679996.1	COGs: COG2378 transcriptional regulator protein; InterPro IPR011991:IPR013196:IPR018356:IPR001034; KEGG: sro:Sros_5404 DeoR family transcriptional regulator; PFAM: hypothetical protein; SPTR: C1YMW4 Predicted transcriptional regulator, COG2378; PFAM: HTH domain
YP_003679997.1	KEGG: sro:Sros_5403 hypothetical protein; SPTR: C1YMW3  uncharacterized protein
YP_003679998.1	KEGG: fre:Franean1_6978 hypothetical protein; SPTR: C1YMW2  uncharacterized protein
YP_003679999.1	InterPro IPR001647:IPR012287:IPR011075:IPR009057; KEGG: sro:Sros_9078  TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YMW1 transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003680000.1	InterPro IPR002656; KEGG: rpc:RPC_4294 acyltransferase; PFAM: acyltransferase; SPTR: C1YMW0 acetyltransferase, fucose-4-O-acetylase; PFAM: acyltransferase family
YP_003680001.1	COGs: COG0110 acetyltransferase (isoleucine patch superfamily); InterPro IPR011004:IPR001451:IPR018357; KEGG: tfu:Tfu_1260 maltose O-acetyltransferase; SPTR: Q47QH1 maltose O-acetyltransferase; PFAM: maltose acetyltransferase
YP_003680002.1	COGs: COG1132 ABC-type multidrug transporter ATPase and permeases; InterProIPR011527:IPR001140:IPR003439:IPR017871:IPR 003593:IPR000366:IPR017940; KEGG: sro:Sros_0424 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; SPTR: C1YMV7 ABC-type multidrug transporter ATPase and permease; PFAM: ABC transporter transmembrane protein; ABC transporter
YP_003680003.1	KEGG: bmj:BMULJ_00097 hypothetical protein; SPTR: C1YMV6  uncharacterized protein; PFAM: protein of unknown function (DUF3592)
YP_003680004.1	COGs: COG5006 permease DMT superfamily protein; InterPro IPR000620; KEGG: sgr:SGR_202  integral membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C1YMV5 Predicted permease, DMT superfamily; PFAM: EamA-like transporter family
YP_003680005.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: sen:SACE_3695 LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: C1YMV4 transcriptional regulator, COG0583; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_003680006.1	KEGG: sro:Sros_6198 signal transduction histidine kinase-like protein; SPTR: C1YMV3  uncharacterized protein
YP_003680007.1	KEGG: gym:GYMC10_2650 hypothetical protein; SPTR: C1YMV2  uncharacterized protein; PFAM: protein of unknown function (DUF2910)
YP_003680008.1	InterPro IPR009057:IPR012287:IPR001647; KEGG: saq:Sare_2399 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YMV1 transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003680009.1	InterPro IPR009002:IPR011576; KEGG: rxy:Rxyl_2643 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: C1YMV0 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase
YP_003680010.1	COGs: COG3903 ATPase; InterPro IPR016032:IPR011991:IPR000792; KEGG: sro:Sros_8841 ATPase-like protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: C1YMU9 Predicted ATPase, COG3903; PFAM: Bacterial regulatory proteins, luxR family
YP_003680011.1	InterPro IPR014922; KEGG: sro:Sros_8844 hypothetical protein; PFAM: Domain of unknown function DUF1801; SPTR: C1YMU8  uncharacterized protein; PFAM: Domain of unknown function (DU1801)
YP_003680012.1	InterPro IPR016181:IPR000182; KEGG: sgr:SGR_6514  acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YMU7 acetyltransferase; PFAM: acetyltransferase (GNAT) family
YP_003680013.1	KEGG: sro:Sros_9193 hypothetical protein; SPTR: C1YMU6  uncharacterized protein
YP_003680014.1	COGs: COG2226 methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: sro:Sros_6478 methyltransferase type 11; PFAM: methyltransferase type 11; SPTR: C1YMU5 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain
YP_003680015.1	COGs: COG3865 conserved hypothetical protein; InterPro IPR009725; KEGG: fra:Francci3_2914 3-demethylubiquinone-9 3-methyltransferase; PFAM: 3-demethylubiquinone-9 3-methyltransferase; SPTR: C1YMU4 Uncharacterized conserved protein; PFAM: 3-demethylubiquinone-9 3-methyltransferase
YP_003680016.1	COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR013217; KEGG: ami:Amir_5271 methyltransferase type 12; PFAM: methyltransferase type 12; SPTR: C1YMU3 methyltransferase, cyclopropane fatty acid synthase; PFAM: methyltransferase domain
YP_003680017.1	KEGG: sro:Sros_9199 hypothetical protein; SPTR: C1YMU2  uncharacterized protein
YP_003680018.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: ami:Amir_2233 histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C1YMU1 histidine kinase; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003680019.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR011006:IPR016032:IPR011991:IPR001789:IPR 000792; KEGG: sro:Sros_5619 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YMU0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003680020.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR016196:IPR011701:IPR001411; KEGG: sro:Sros_7047  transmembrane efflux protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YMT9 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily
YP_003680021.1	COGs: COG4129 membrane protein; KEGG: sen:SACE_4168 integral membrane protein; SPTR: C1YMT8 Predicted membrane protein, COG4129; PFAM: Bacterial protein of unknown function (DUF939)
YP_003680022.1	InterPro IPR008090:IPR000408; KEGG: sro:Sros_5551 hypothetical protein; PFAM: ferric iron reductase; SPTR: C1YMT7 Uncharacterized Fe-S protein; PFAM: FhuF 2Fe-2S C-terminal domain
YP_003680023.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: tfu:Tfu_0329 signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C1YMT6 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase
YP_003680024.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR011006:IPR011991:IPR001789:IPR000792; KEGG: tfu:Tfu_0330 LuxR response regulator receiver; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; SPTR: C1YMT5 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003680025.1	KEGG: tfu:Tfu_0331 hypothetical protein; SPTR: C1YMT4  uncharacterized protein
YP_003680026.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683:IPR004104; KEGG: tfu:Tfu_1672  oxidoreductase; PFAM: oxidoreductase domain protein; oxidoreductase domain; SPTR: C1YMT2 Predicted dehydrogenase; PFAM: oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase family, C-terminal alpha/beta domain
YP_003680027.1	InterPro IPR000182; KEGG: ami:Amir_4659 hypothetical protein; SPTR: C1YMT1  uncharacterized protein
YP_003680028.1	InterPro IPR008538:IPR012296; KEGG: tcu:Tcur_3383 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: C1YMT0 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF820)
YP_003680029.1	COGs: COG2378 transcriptional regulator protein; InterPro IPR013196:IPR001034:IPR018356; KEGG: sro:Sros_4133 DeoR family transcriptional regulator; PFAM: hypothetical protein; SMART: regulatory protein DeoR; SPTR: C1YMS9 Predicted transcriptional regulator, COG2378; PFAM: HTH domain
YP_003680030.1	COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR013813:IPR006175; KEGG: sen:SACE_3661 ribonuclease; PFAM: endoribonuclease L-PSP; SPTR: C1YMS8  translation initiation inhibitor, yjgF family; PFAM: endoribonuclease L-PSP
YP_003680031.1	COGs: COG1834 N-dimethylarginine dimethylaminohydrolase; InterPro IPR003198; KEGG: tcu:Tcur_3241 dimethylargininase; PFAM: amidinotransferase; PRIAM: dimethylargininase; SPTR: C1YMS7 N-dimethylarginine dimethylaminohydrolase; PFAM: Amidinotransferase
YP_003680032.1	COGs: COG0665 glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: rxy:Rxyl_0188 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: C1YMS6 glycine/D-amino acid oxidase deaminating; PFAM: FAD dependent oxidoreductase
YP_003680033.1	COGs: COG4298 conserved hypothetical protein; InterPro IPR008024; KEGG: fre:Franean1_6598 YiaAB two helix domain-containing protein; PFAM: YiaAB two helix domain protein; SPTR: C1YMS5 Uncharacterized conserved protein; PFAM: yiaA/B two helix domain
YP_003680034.1	COGs: COG0502 Biotin synthase; InterProIPR013785:IPR007197:IPR010722:IPR002684:IPR 006638; KEGG: sgr:SGR_6282 biotin synthase; PFAM: biotin and thiamin synthesis associated; radical SAM protein; PRIAM: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: C1YMS4 Biotin synthase; TIGRFAM: biotin synthase; PFAM: radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase
YP_003680035.1	COGs: COG3173 aminoglycoside phosphotransferase; InterPro IPR011009:IPR002575; KEGG: stp:Strop_0209 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: C1YMS3 Predicted aminoglycoside phosphotransferase; PFAM: phosphotransferase enzyme family
YP_003680036.1	InterPro IPR009057:IPR011075:IPR012287:IPR001647; KEGG: ami:Amir_5863 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YMS2 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003680037.1	COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR016040:IPR002198:IPR002347; KEGG: ami:Amir_5862 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YMS1  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003680038.1	KEGG: rha:RHA1_ro00638 hypothetical protein; SPTR: C1YMS0  uncharacterized protein
YP_003680039.1	COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834:IPR006402:IPR005833; KEGG: tcu:Tcur_3350 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: C1YMR8 Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_003680040.1	InterPro IPR016196:IPR005828:IPR005829:IPR003663; KEGG: tfu:Tfu_1668 sugar transporter; PFAM: general substrate transporter; SPTR: C1YMR7 MFS transporter sugar porter family; TIGRFAM: sugar transporter; PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter sugar porter (SP) family
YP_003680041.1	InterPro IPR018649; KEGG: aeh:Mlg_1384 hypothetical protein; PFAM: protein of unknown function DUF2078, membrane; SPTR: C1YMR6 Predicted membrane protein (DUF2078); PFAM: Predicted membrane protein (DUF2078)
YP_003680042.1	COGs: COG0147 anthranilate/para-aminobenzoate synthase component I; InterProIPR001317:IPR005801:IPR017926:IPR005802:IPR 011702:IPR006220:IPR000991:IPR006805:IPR006221:IPR015890; KEGG: tfu:Tfu_1666 aminodeoxychorismate synthase, glutamine amidotransferase subunit / aminodeoxychorismate synthase, subunit I; PFAM: chorismate binding-like; glutamine amidotransferase class-I; anthranilate synthase component I domain protein; SPTR: C1YMR5 aminodeoxychorismate synthase, glutamine amidotransferase subunit; aminodeoxychorismate synthase, subunit I; TIGRFAM: para-aminobenzoate synthase, subunit I; glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; chorismate binding enzyme; anthranilate synthase component I, N terminal region; TIGRFAM: glutamine amidotransferase or aminodeoxychorismate synthase; aminodeoxychorismate synthase, component I, bacterial clade
YP_003680043.1	KEGG: sco:SCO4954 hypothetical protein; SPTR: C1YMR4  uncharacterized protein
YP_003680044.1	KEGG: sgr:SGR_3088 hypothetical protein; SPTR: C1YMR3 Uncharacterized conserved protein
YP_003680045.1	InterPro IPR001647:IPR012287:IPR011075:IPR009057; KEGG: sro:Sros_4071  TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YMR2 transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003680046.1	COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR016040:IPR006115; KEGG: sro:Sros_4072 NAD_Gly3P_dh, NAD-dependent glycerol-3-phosphate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; SPTR: C1YMR1 beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_003680047.1	InterPro IPR013217; KEGG: msm:MSMEG_4128 hypothetical protein; PFAM: methyltransferase type 12; SPTR: C1YMR0 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain
YP_003680048.1	COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367:IPR008988:IPR007167; KEGG: tfu:Tfu_1664 iron dependent repressor; PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor; SPTR: C1YMQ9 Mn-dependent transcriptional regulator; PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain
YP_003680049.1	InterPro IPR012296:IPR008538:IPR001202; KEGG: tcu:Tcur_3383 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: C1YMQ8 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF820)
YP_003680050.1	COGs: COG3540 phosphodiesterase/alkaline phosphatase D; InterPro IPR003961:IPR017909:IPR006311:IPR018946; KEGG: sen:SACE_0175 phosphodiesterase/alkaline phosphatase D; PFAM: alkaline phosphatase D-related; PRIAM: alkaline phosphatase; SPTR: C1YMQ7 phosphodiesterase/alkaline phosphatase D; PFAM: PhoD-like phosphatase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003680051.1	COGs: COG2910  NADH-flavin reductase; InterPro IPR008030:IPR016040; KEGG: tfu:Tfu_1230 hypothetical protein; PFAM: NmrA family protein; SPTR: C1YMQ6  NADH-flavin reductase; PFAM: NmrA-like family
YP_003680052.1	InterPro IPR000835:IPR011991; KEGG: sro:Sros_3541 transcriptional regulator, Mar family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YMQ4 transcriptional regulator; PFAM: MarR family
YP_003680053.1	KEGG: gvi:gll3440 hypothetical protein; SPTR: C1YMQ3  uncharacterized protein
YP_003680054.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sro:Sros_7184 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YMQ2 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003680055.1	InterPro IPR011701:IPR016196; KEGG: sro:Sros_1049 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YMQ1 Major Facilitator Superfamily transporter; PFAM: Major Facilitator Superfamily
YP_003680056.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073:IPR000639; KEGG: sma:SAV_4410 hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YMQ0 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003680057.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR011256:IPR010499:IPR018060:IPR009057; KEGG: tfu:Tfu_1266 AraC family transcriptional regulator; PFAM: transcription activator effector binding; SMART: Helix-turn-helix, AraC domain; transcription activator effector binding; SPTR: C1YMP9 AraC family transcriptional regulator; PFAM: Bacterial transcription activator, effector binding domain
YP_003680058.1	KEGG: tfu:Tfu_0160 hypothetical protein; SPTR: C1YMP8  uncharacterized protein
YP_003680059.1	COGs: COG0847 DNA polymerase III subunit epsilon and related 3'-5' exonuclease; InterPro IPR013520:IPR001357:IPR006055:IPR012337; KEGG: tfu:Tfu_0902 DNA polymerase III, subunit epsilon; PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; SPTR: C1YMP7 DNA polymerase III subunit epsilon-like 3'-5' exonuclease; PFAM: exonuclease
YP_003680060.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: sgr:SGR_3295  ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YMP6 ABC-type multidrug transporter ATPase component; PFAM: ABC transporter
YP_003680061.1	KEGG: sco:SCO3223 ABC transporter  transmembrane protein; SPTR: C1YMP5  uncharacterized protein
YP_003680062.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594; KEGG: sro:Sros_8723 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PRIAM: histidine kinase; SMART: ATP-binding region ATPase domain protein; SPTR: C1YMP4 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003680063.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR000792:IPR001789:IPR011991:IPR011006:IPR 016032; KEGG: sro:Sros_4051 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; SPTR: C1YMP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003680064.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR017442:IPR000719:IPR020635:IPR002290:IPR 011009:IPR017441:IPR008271; KEGG: tcu:Tcur_3969 serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: C1YMP2 RNA polymerase sigma factor, sigma-70 family; PFAM: protein kinase domain
YP_003680065.1	COGs: COG4941 RNA polymerase sigma factor containing a TPR repeat domain; InterProIPR007627:IPR013249:IPR014284:IPR013325:IPR 013324; KEGG: rop:ROP_37090  RNA polymerase ECF-type sigma factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: C1B8F3  RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003680066.1	COGs: COG3795 conserved hypothetical protein; InterPro IPR005545:IPR011008; KEGG: svi:Svir_18250 hypothetical protein; PFAM: YCII-related; SPTR: C1YMP1 Uncharacterized conserved protein; PFAM: YCII-related domain
YP_003680067.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073:IPR000639; KEGG: sco:SCO0899 hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YMN8 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003680068.1	COGs: COG3629 DNA-binding transcriptional activator of the SARP family; InterPro IPR003593:IPR005158:IPR001867:IPR016032; KEGG: ami:Amir_6166 SARP family transcriptional regulator; PFAM: transcriptional activator domain; transcriptional regulator; SMART: transcriptional regulator; ATPase AAA; SPTR: C1YMN7 DNA-binding transcriptional activator of the SARP family; PFAM: Bacterial transcriptional activator domain; transcriptional regulatory protein, C terminal
YP_003680069.1	COGs: COG0803 ABC-type metal ion transporter periplasmic component/surface adhesin; InterPro IPR006127:IPR006128:IPR006129; KEGG: tfu:Tfu_1663  ABC transporter substrate-binding protein; PFAM: periplasmic solute binding protein; SPTR: C1YMN6 ABC-type metal ion transporter periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family
YP_003680070.1	COGs: COG1121 ABC-type Mn/Zn transporters ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: nfa:nfa24350  ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YMN5 ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter
YP_003680071.1	COGs: COG1108 ABC-type Mn2+/Zn2+ transporters permeases; InterPro IPR001626; KEGG: tfu:Tfu_1661  ABC transporter membrane protein; PFAM: ABC transporter; SPTR: C1YMN4 ABC-type Mn2+/Zn2+ transporter permease; PFAM: ABC 3 transport family
YP_003680072.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154:IPR013149:IPR011032:IPR016040; KEGG: sco:SCO5069 oxidoreductase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; SPTR: C1YMN3 Zn-dependent oxidoreductase, NADPH:quinone reductase; PFAM: alcohol dehydrogenase GroES-like domain
YP_003680073.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: ami:Amir_6201 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YMN2 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003680074.1	COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: ami:Amir_4161 protein of unknown function DUF112 transmembrane; PFAM: protein of unknown function DUF112 transmembrane; SPTR: C1YMN1 Uncharacterized conserved protein; PFAM: tripartite tricarboxylate transporter TctA family
YP_003680075.1	KEGG: ami:Amir_4162 hypothetical protein; SPTR: C1YMN0  uncharacterized protein
YP_003680076.1	COGs: COG3181 conserved hypothetical protein; InterPro IPR005064; KEGG: ami:Amir_4163 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C1YMM9 Uncharacterized conserved protein; PFAM: tripartite tricarboxylate transporter family receptor
YP_003680077.1	COGs: COG1409 phosphohydrolase; InterPro IPR004843; KEGG: sro:Sros_8262 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: C1YMM8 Predicted phosphohydrolase; PFAM: Calcineurin-like phosphoesterase
YP_003680078.1	COGs: COG1946 acyl-CoA thioesterase; KEGG: tcu:Tcur_1740 hypothetical protein; SPTR: C1YMM7 acyl-CoA thioesterase
YP_003680079.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR009061:IPR015358:IPR012925; KEGG: sen:SACE_7241 MerR family transcriptional regulator; PFAM: TipAS antibiotic-recognition domain protein; regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; SPTR: C1YMM6 transcriptional regulator; PFAM: MerR family regulatory protein; MerR, DNA binding; TipAS antibiotic-recognition domain
YP_003680080.1	KEGG: saq:Sare_3097 hypothetical protein; SPTR: C1YMM5  uncharacterized protein
YP_003680081.1	InterPro IPR000086:IPR015797:IPR020084; KEGG: tcu:Tcur_2439 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: C1YMM4 ADP-ribose pyrophosphatase; PFAM: NUDIX domain
YP_003680082.1	COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593; KEGG: cef:CE0017  ABC transporter permease; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YMM3 ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter
YP_003680083.1	COGs: COG2378 transcriptional regulator protein; InterPro IPR013196:IPR001034; KEGG: sro:Sros_0452 helix-turn-helix type 11 domain protein; PFAM: hypothetical protein; SPTR: C1YMM2 Predicted transcriptional regulator, COG2378; PFAM: HTH domain
YP_003680084.1	COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR013813:IPR006175; KEGG: sro:Sros_0453 endoribonuclease L-PSP; PFAM: endoribonuclease L-PSP; SPTR: C1YMM1  translation initiation inhibitor, yjgF family; PFAM: endoribonuclease L-PSP
YP_003680085.1	KEGG: nfa:nfa21820 hypothetical protein; SPTR: C1YMM0  uncharacterized protein
YP_003680086.1	InterPro IPR017021:IPR018988; KEGG: vfi:VF_1078 hypothetical protein; PFAM: protein of unknown function DUF2000; SPTR: C1YML9  uncharacterized protein; PFAM: protein of unknown function (DUF2000)
YP_003680087.1	COGs: COG1522 transcriptional regulators; InterProIPR019887:IPR011991:IPR000485:IPR019888:IPR 011008; KEGG: cai:Caci_4349 AsnC family transcriptional regulator; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type; SPTR: C1YML8 transcriptional regulator; PFAM: AsnC family
YP_003680088.1	KEGG: mba:Mbar_A2719 hypothetical protein; SPTR: C1YML7  uncharacterized protein
YP_003680089.1	KEGG: ami:Amir_4230 hypothetical protein; SPTR: C1YML6  uncharacterized protein
YP_003680090.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR015358:IPR009061; KEGG: stp:Strop_1354 regulatory protein, MerR; PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; SPTR: C1YML5 Predicted transcriptional regulator; PFAM: MerR family regulatory protein; MerR, DNA binding
YP_003680091.1	COGs: COG2226 methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: fre:Franean1_4141 methyltransferase type 11; PFAM: methyltransferase type 11; SPTR: C1YML4 methyltransferase family protein; PFAM: methyltransferase domain
YP_003680092.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sro:Sros_5337  TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YML3 transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003680093.1	COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030:IPR016040; KEGG: kse:Ksed_17930 predicted nucleoside-diphosphate sugar epimerase; PFAM: NmrA family protein; SPTR: C1YML2 Predicted nucleoside-diphosphate sugar epimerase; PFAM: NmrA-like family
YP_003680094.1	COGs: COG2223 nitrate/nitrite transporter; InterPro IPR011701:IPR016196:IPR018202; KEGG: sgr:SGR_4575  nitrate extrusion protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YML1 nitrate/nitrite transporter; PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator)
YP_003680095.1	COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterPro IPR009010:IPR006963:IPR006657:IPR006656; KEGG: ami:Amir_0835 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; SPTR: C1YML0 Assimilatory nitrate reductase (NADH) subunit alpha apoprotein; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_003680096.1	COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027:IPR007419; KEGG: ami:Amir_0836 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; SPTR: C1YMK9 NAD(P)H-nitrite reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain
YP_003680097.1	InterPro IPR007061; KEGG: sma:SAV_7047 hypothetical protein; PFAM: protein of unknown function DUF664; SPTR: C1YWI2  uncharacterized protein; PFAM: protein of unknown function (DUF664)
YP_003680098.1	COGs: COG5500 integral membrane protein; InterPro IPR018726; KEGG: tcu:Tcur_1363 hypothetical protein; PFAM: protein of unknown function DUF2266, transmembrane; SPTR: C1YWI1 Predicted integral membrane protein, COG5500; PFAM: Domain of unknown function (DUF1772)
YP_003680099.1	COGs: COG2208 serine phosphatase RsbU regulator of sigma subunit; InterPro IPR010822:IPR001932; KEGG: tcu:Tcur_4365 protein serine/threonine phosphatase; PFAM: stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; SPTR: C1YWI0 stage II sporulation protein E (SpoIIE); PFAM: stage II sporulation protein E (SpoIIE)
YP_003680100.1	InterPro IPR011701:IPR016196; KEGG: ami:Amir_2858 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: C1YWH9 Major Facilitator Superfamily transporter; PFAM: Major Facilitator Superfamily
YP_003680101.1	KEGG: sgr:SGR_2939 hypothetical protein; SPTR: C1YWH8  uncharacterized protein
YP_003680102.1	COGs: COG2761 dithiol-disulfide isomerase involved in polyketide biosynthesis; InterPro IPR001853:IPR012336; KEGG: tfu:Tfu_1267 FrnE protein; PFAM: DSBA oxidoreductase; SPTR: C1YWH7 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis; PFAM: DSBA-like thioredoxin domain
YP_003680103.1	COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: sco:SCO5809 hydrolase; PFAM: ADP-ribosylation/crystallin J1; SPTR: C1YWH6 ADP-ribosylglycohydrolase; PFAM: ADP-ribosylglycohydrolase
YP_003680104.1	COGs: COG1251 NAD(P)H-nitrite reductase; InterProIPR005117:IPR013027:IPR017121:IPR006066:IPR 007419:IPR006067:IPR001327:IPR012744; KEGG: ami:Amir_0838 nitrite reductase (NAD(P)H), large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; SPTR: C1YWH5 Assimilatory nitrite reductase (NAD(P)H) large subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain; nitrite and sulphite reductase 4Fe-4S domain; nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit
YP_003680105.1	COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941:IPR012748:IPR017881; KEGG: sen:SACE_3803 nitrite reductase (NAD(P)H) small subunit; SPTR: C1YWH4 NAD(P)H-dependent nitrite reductase, small subunit; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; TIGRFAM: nitrite reductase [NAD(P)H], small subunit
YP_003680106.1	COGs: COG1587 uroporphyrinogen-III synthase; InterPro IPR003754:IPR001867:IPR011991:IPR016032; KEGG: sco:SCO2958 bifunctional uroporphyrinogen-III synthetase/response regulator domain protein; PFAM: uroporphyrinogen III synthase HEM4; transcriptional regulator domain protein; SPTR: C1YWH3 uroporphyrinogen-III synthase; PFAM: transcriptional regulatory protein, C terminal; uroporphyrinogen-III synthase HemD
YP_003680107.1	COGs: COG2138 conserved hypothetical protein; InterPro IPR002762; KEGG: rha:RHA1_ro06369 hypothetical protein; PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; SPTR: C1YWH2 Uncharacterized conserved protein; PFAM: CbiX
YP_003680108.1	InterPro IPR000340:IPR016130; KEGG: tfu:Tfu_1623 hypothetical protein; PFAM: Dual specificity protein phosphatase; SPTR: C1YWH1 Dual specificity phosphatase; PFAM: Dual specificity phosphatase, catalytic domain
YP_003680109.1	COGs: COG0797 Lipoprotein; InterPro IPR005132:IPR012997:IPR009009; KEGG: saq:Sare_0084 lipoprotein A; PFAM: Rare lipoprotein A; SPTR: C1YWH0 Rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; TIGRFAM: rare lipoprotein A
YP_003680110.1	COGs: COG2251 nuclease (RecB family); InterPro IPR019993:IPR003593; KEGG: ami:Amir_5304 ATPase AAA; SMART: ATPase AAA; SPTR: C1YU10 Predicted nuclease (RecB family); TIGRFAM: RecB family nuclease, TIGRFAM: RecB family nuclease, , TM0106 family
YP_003680111.1	KEGG: tmz:Tmz1t_2772 RDD domain containing protein; SPTR: C1YU09  uncharacterized protein
YP_003680112.1	KEGG: tfu:Tfu_1532 hypothetical protein; SPTR: C1YU08  uncharacterized protein
YP_003680113.1	InterPro IPR013762:IPR010998:IPR002104:IPR011010; KEGG: nfa:nfa26240  integrase; PFAM: integrase family protein; SPTR: C1YU07 Site-specific recombinase XerD; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_003680114.1	KEGG: tfu:Tfu_1533 hypothetical protein; SPTR: C1YU06  uncharacterized protein
YP_003680115.1	KEGG: tfu:Tfu_1534 hypothetical protein; SPTR: C1YU05  uncharacterized protein
YP_003680116.1	COGs: COG1113 gamma-aminobutyrate permease and related permease; InterPro IPR004841:IPR002293:IPR004840; KEGG: msm:MSMEG_6196 GabA permease; PFAM: amino acid permease-associated region; SPTR: C1YU04 gamma-aminobutyrate permease-like transporter; PFAM: amino acid permease
YP_003680117.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594; KEGG: sro:Sros_5402 signal transduction histidine kinase-like protein; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C1YU03 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase
YP_003680118.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR001789:IPR000792:IPR011991:IPR011006:IPR 016032; KEGG: sen:SACE_0956 two-component system response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YU02 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003680119.1	KEGG: rxy:Rxyl_2678 hypothetical protein; SPTR: C1YU01 Predicted O-methyltransferase, COG4122
YP_003680120.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: tfu:Tfu_1540  hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YU00 Predicted hydrolase or acyltransferase of alpha/beta superfamily
YP_003680121.1	COGs: COG0708 exonuclease III; InterPro IPR005135:IPR000097:IPR004808; KEGG: tfu:Tfu_1541 AP endonuclease; PFAM: endonuclease/exonuclease/phosphatase; PRIAM: exodeoxyribonuclease III; SPTR: C1YTZ9 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: endonuclease/exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth)
YP_003680122.1	COGs: COG4974 Site-specific recombinase XerD; InterProIPR013762:IPR010998:IPR002104:IPR011010:IPR 004107; KEGG: sro:Sros_4455 integrase family protein; PFAM: integrase family protein; integrase; SPTR: C1YTZ8 Site-specific recombinase XerD; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_003680123.1	COGs: COG0282 acetate kinase; InterPro IPR000890:IPR004372; KEGG: fal:FRAAL5741 acetate kinase A (propionate kinase 2); PFAM: acetate and butyrate kinase; SPTR: C1YTZ7 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetokinase family; TIGRFAM: acetate kinase
YP_003680124.1	COGs: COG3957 phosphoketolase; InterProIPR009014:IPR018969:IPR019790:IPR019789:IPR 005593:IPR018970; KEGG: tcu:Tcur_1271 phosphoketolase; PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; Xylulose 5-phosphate/fructose 6-phosphate phosphoketolase-like; PRIAM: phosphoketolase; SPTR: C1YTZ6 phosphoketolase; PFAM: XFP N-terminal domain; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; XFP C-terminal domain
YP_003680125.1	KEGG: tfu:Tfu_1545 hypothetical protein; SPTR: C1YTZ5  uncharacterized protein
YP_003680126.1	COGs: COG0365 acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873; KEGG: tfu:Tfu_1546  acyl-CoA synthetase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YTZ4 acyl-CoA synthetase/AMP-acid ligase; PFAM: AMP-binding enzyme
YP_003680127.1	COGs: COG2154 Pterin-4a-carbinolamine dehydratase; InterPro IPR001533; KEGG: sro:Sros_7703  pterin-4-alpha-carbinolamine dehydratase; PFAM: transcriptional coactivator/pterin dehydratase; SPTR: C1YTZ3 Pterin-4a-carbinolamine dehydratase; PFAM: Pterin 4 alpha carbinolamine dehydratase
YP_003680128.1	InterPro IPR013587:IPR003660:IPR003594; KEGG: tfu:Tfu_1433 ATP-binding region, ATPase-like; PFAM: ATP-binding region ATPase domain protein; nitrate and nitrite sensing domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YTZ2 Signal transduction histidine kinase, COG0642; PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; nitrate and nitrite sensing
YP_003680129.1	COGs: COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid; InterPro IPR004942; KEGG: tfu:Tfu_1432 hypothetical protein; PFAM: Roadblock/LC7 family protein; SPTR: C1YTZ1 Uncharacterized conserved protein; PFAM: Roadblock/LC7 domain
YP_003680130.1	InterPro IPR007995; KEGG: tfu:Tfu_1431 hypothetical protein; PFAM: protein of unknown function DUF742; SPTR: C1YTZ0  uncharacterized protein; PFAM: protein of unknown function (DUF742)
YP_003680131.1	COGs: COG2229 GTPase; InterPro IPR004130; KEGG: tfu:Tfu_1430  ATP/GTP-binding protein; PFAM: protein of unknown function ATP binding; SPTR: Q47Q01  ATP/GTP-binding protein; PFAM: Conserved hypothetical ATP binding protein
YP_003680132.1	COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; InterPro IPR017871:IPR003593:IPR003439; KEGG: tfu:Tfu_0336 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YTY8 ABC-type cobalamin/Fe3+-siderophore transporter ATPase component; PFAM: ABC transporter
YP_003680133.1	COGs: COG4779 ABC-type enterobactin transporter permease; InterPro IPR000522; KEGG: tfu:Tfu_0337 ABC-type enterobactin transporter inner membrane subunit; PFAM: transporter permease; SPTR: C1YTY7 ABC-type enterobactin transporter permease; PFAM: FecCD transport family
YP_003680134.1	COGs: COG0609 ABC-type Fe3+-siderophore transporter permease; InterPro IPR000522; KEGG: tfu:Tfu_0338 ABC-type Fe3+-siderophore transporter inner membrane subunit; PFAM: transport system permease; SPTR: C1YTY6 ABC-type Fe3+-siderophore transport system, permease; PFAM: FecCD transport family
YP_003680135.1	COGs: COG0614 ABC-type Fe3+-hydroxamate transporter periplasmic component; InterPro IPR002491; KEGG: sgr:SGR_3182  iron-siderophore ABC transporter substrate-binding protein; PFAM: periplasmic binding protein; SPTR: C1YTY5 ABC-type Fe3+-hydroxamate transporter periplasmic component; PFAM: Periplasmic binding protein
YP_003680136.1	InterPro IPR000182:IPR016181; KEGG: scl:sce0789 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YTY4 acetyltransferase (GNAT) family protein
YP_003680137.1	COGs: COG0730 permease; InterPro IPR002781; KEGG: tfu:Tfu_2578 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: C1YTY3 Predicted permease; PFAM: Sulfite exporter TauE/SafE
YP_003680138.1	SPTR: C1YTY1  uncharacterized protein
YP_003680139.1	COGs: COG0400 esterase; InterPro IPR003140; KEGG: rxy:Rxyl_1054 phospholipase/carboxylesterase; PFAM: phospholipase/carboxylesterase; SPTR: C1YTY2 Predicted esterase; PFAM: phospholipase/carboxylesterase
YP_003680140.1	InterPro IPR004360; KEGG: sen:SACE_3713 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YTY0 Lactoylglutathione lyase-like lyase; PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003680141.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196:IPR002355; KEGG: art:Arth_2848 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YTX9 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003680142.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: sma:SAV_3360 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: C1YTX8 transcriptional regulator, COG0583; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_003680143.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002198:IPR002347; KEGG: sgr:SGR_3149  short chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YTX7  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003680144.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR017442:IPR000719:IPR020635:IPR002290:IPR 011009:IPR017441:IPR008271; KEGG: tfu:Tfu_1756 tyrosine protein kinase:serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: C1YTX6 protein kinase family protein; PFAM: protein kinase domain
YP_003680145.1	COGs: COG2124 cytochrome P450; InterPro IPR017972:IPR001128:IPR002397; KEGG: sen:SACE_5939 cytochrome p450-like enzyme; PFAM: cytochrome P450; SPTR: C1YTX5 cytochrome P450; PFAM: cytochrome P450
YP_003680146.1	COGs: COG3693 beta-1 4-xylanase; InterPro IPR001000:IPR013781:IPR017853; KEGG: tfu:Tfu_2923 xylanase; PFAM: glycoside hydrolase family 10; PRIAM: endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10; SPTR: C1YTX4 beta-1,4-xylanase; PFAM: glycosyl hydrolase family 10
YP_003680147.1	COGs: COG3570 Streptomycin 6-kinase; InterPro IPR006748:IPR011009; KEGG: xce:Xcel_0261 6-kinase; PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; PRIAM: Streptomycin 6-kinase; SPTR: C1YTX3 Streptomycin 6-kinase; PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase
YP_003680148.1	COGs: COG0657 esterase/lipase; InterPro IPR013094; KEGG: nml:Namu_5169 alpha/beta hydrolase; PFAM: alpha/beta hydrolase; SPTR: C1YTX2 esterase/lipase; PFAM: alpha/beta hydrolase fold
YP_003680149.1	KEGG: nml:Namu_5170 CdaR family transcriptional regulator; SPTR: C1YTX1  uncharacterized protein
YP_003680150.1	COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: nar:Saro_3305 pentapeptide repeat-containing protein; PFAM: pentapeptide repeat protein; SPTR: C1YTX0 Uncharacterized low-complexity protein; PFAM: Pentapeptide repeats (8 copies)
YP_003680151.1	COGs: COG3835 Sugar diacid utilization regulator; InterPro IPR012914; KEGG: sro:Sros_2569  PucR family transcriptional regulator; PFAM: purine catabolism PurC domain protein; SPTR: C1YTW9 Sugar diacid utilization regulator; PFAM: Purine catabolism regulatory protein-like family
YP_003680152.1	COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterProIPR005107:IPR016166:IPR002346:IPR016169:IPR 016167; KEGG: sen:SACE_1264 molybdopterin dehydrogenase, FAD-binding protein; PFAM: molybdopterin dehydrogenase FAD-binding; SPTR: C1YTW8 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain
YP_003680153.1	COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888:IPR006058:IPR012675; KEGG: sro:Sros_2775 hypothetical protein; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; SPTR: C1YTW7 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain
YP_003680154.1	COGs: COG0402 cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680:IPR011059; KEGG: sro:Sros_2776 amidohydrolase; PFAM: amidohydrolase; SPTR: C1YTW6 cytosine deaminase-like metal-dependent hydrolase; PFAM: Amidohydrolase family
YP_003680155.1	COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR008274:IPR000674; KEGG: sro:Sros_2568 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; SPTR: C1YTW5 xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; TIGRFAM: xanthine dehydrogenase D subunit
YP_003680156.1	COGs: COG2252 Permease; InterPro IPR006043; KEGG: tcu:Tcur_3129 xanthine/uracil/vitamin C permease; PFAM: xanthine/uracil/vitamin C permease; SPTR: C1YTW4 Permease; PFAM: Permease family
YP_003680157.1	COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterProIPR001041:IPR002888:IPR000674:IPR008274:IPR 012675:IPR006058; KEGG: sro:Sros_5622 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; SPTR: C1YTW2 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; 2Fe-2S iron-sulfur cluster binding domain; aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; [2Fe-2S] binding domain
YP_003680158.1	COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterPro IPR002346:IPR016169:IPR005107:IPR016166; KEGG: sro:Sros_5621 oxidoreductase, FAD-binding subunit; PFAM: molybdopterin dehydrogenase FAD-binding; SPTR: C1YTW1 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain
YP_003680159.1	InterPro IPR008775; KEGG: sgr:SGR_180 hypothetical protein; PFAM: phytanoyl-CoA dioxygenase; SPTR: C1YTW0 phytanoyl-CoA dioxygenase (PhyH); PFAM: phytanoyl-CoA dioxygenase (PhyH)
YP_003680160.1	COGs: COG0318 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterProIPR020845:IPR009081:IPR013120:IPR001242:IPR 000873:IPR006162:IPR006163:IPR016040:IPR010071; KEGG: bph:Bphy_7636 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; Male sterility domain; condensation domain protein; phosphopantetheine-binding; SPTR: C1YTV9 amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation domain protein; PFAM: phosphopantetheine attachment site; Male sterility protein; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; thioester reductase domain
YP_003680161.1	InterPro IPR003819; KEGG: fra:Francci3_1809 hypothetical protein; PFAM: Taurine catabolism dioxygenase TauD/TfdA; SPTR: C1YTV8 Taurine catabolism dioxygenase TauD, TfdA family; PFAM: Taurine catabolism dioxygenase TauD, TfdA family
YP_003680162.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: acr:Acry_2398 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YTV7  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003680163.1	KEGG: mlb:MLBr_00308 hypothetical protein; SPTR: C1YTV6  uncharacterized protein; PFAM: methyltransferase domain
YP_003680164.1	COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; InterProIPR011127:IPR011095:IPR013817:IPR013816:IPR 011761:IPR016185; KEGG: tfu:Tfu_1640 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; PRIAM: D-alanine--D-alanine ligase; SPTR: Q47PE4 D-alanine--D-alanine ligase; PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase
YP_003680165.1	COGs: COG1167 transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR004839:IPR015421:IPR015422:IPR015424; KEGG: tfu:Tfu_1641 valine-pyruvate aminotransferase; PFAM: aminotransferase class I and II; SPTR: C1YTV4 transcriptional regulator with HTH domain and aminotransferase domain; PFAM: aminotransferase class I and II
YP_003680166.1	KEGG: sen:SACE_1344 PE-PGRS family protein; SPTR: A4F9E2 PE-PGRS family protein
YP_003680167.1	COGs: COG3284 transcriptional activator of acetoin/glycerol metabolism; InterPro IPR003018; KEGG: sma:SAV_2124 regulatory protein; PFAM: GAF domain protein; SMART: GAF domain protein; SPTR: C1YTV3 transcriptional activator of acetoin/glycerol metabolism; PFAM: GAF domain
YP_003680168.1	COGs: COG2508 Regulator of polyketide synthase expression; InterPro IPR012914; KEGG: tfu:Tfu_0057  regulatory protein; PFAM: purine catabolism PurC domain protein; SPTR: C1YV98 Purine catabolism regulator-like protein (Fragment); PFAM: Purine catabolism regulatory protein-like family; Bacterial regulatory helix-turn-helix protein, lysR family
YP_003680169.1	COGs: COG0010 arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR006035:IPR005925:IPR005924:IPR020855; KEGG: tfu:Tfu_0058 agmatinase; PFAM: arginase/agmatinase/formiminoglutamase; SPTR: C1YV97 Agmatinase; TIGRFAM: agmatinase; PFAM: arginase family; TIGRFAM: agmatinase; formimidoylglutamase
YP_003680170.1	InterPro IPR001647:IPR012287:IPR009057:IPR011075; KEGG: ami:Amir_6979 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YV96 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003680171.1	COGs: COG0675 transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: sen:SACE_4000 transposase, IS891/IS1136/IS1341; PFAM:  transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; SPTR: C1YV95 transposase, IS605 OrfB family, central region; TIGRFAM: transposase, IS605 OrfB family; PFAM: Helix-turn-helix domain; transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region
YP_003680172.1	COGs: COG1834 N-dimethylarginine dimethylaminohydrolase; InterPro IPR003198; KEGG: tcu:Tcur_3814 amidinotransferase; PFAM: amidinotransferase; SPTR: C1YV94 N-dimethylarginine dimethylaminohydrolase; PFAM: Amidinotransferase
YP_003680173.1	COGs: COG3509 poly(3-hydroxybutyrate) depolymerase; InterPro IPR010126:IPR001919:IPR012291:IPR008965; KEGG: ami:Amir_3959 esterase, PHB depolymerase family; PFAM: cellulose-binding family II; esterase PHB depolymerase; SMART: cellulose-binding family II; SPTR: C1YV93 esterase, PHB depolymerase family; TIGRFAM: esterase, PHB depolymerase family; PFAM: cellulose binding domain; esterase PHB depolymerase; TIGRFAM: esterase, PHB depolymerase family
YP_003680174.1	COGs: COG1273 conserved hypothetical protein; InterPro IPR006164:IPR009187:IPR016194; KEGG: sco:SCO0601 secreted protein; PFAM: Ku domain protein; SMART: Ku domain protein; SPTR: C1YV92 Ku protein; TIGRFAM: Ku protein; PFAM: Ku70/Ku80 beta-barrel domain; TIGRFAM: Ku protein, prokaryotic
YP_003680175.1	COGs: COG1062 Zn-dependent alcohol dehydrogenase class III; InterProIPR013149:IPR016040:IPR011032:IPR002328:IPR 013154; KEGG: sco:SCO1705 alcohol dehydrogenase (zinc-binding); PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; SPTR: C1YV91 Zn-dependent alcohol dehydrogenase, class III; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003680176.1	COGs: COG3573 oxidoreductase; InterPro IPR014614:IPR003953; KEGG: hau:Haur_1725  FAD-binding dehydrogenase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: C1YV90 Predicted oxidoreductase; PFAM: FAD binding domain
YP_003680177.1	COGs: COG4877 conserved hypothetical protein; KEGG: fre:Franean1_0105 hypothetical protein; SPTR: C1YV89 Uncharacterized conserved protein
YP_003680178.1	COGs: COG0330 membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: tfu:Tfu_1437 hypothetical protein; PFAM: hypothetical protein; SMART: hypothetical protein; SPTR: C1YV88 membrane protease subunit, stomatin/prohibitin; PFAM: SPFH domain / Band 7 family
YP_003680179.1	COGs: COG3402 conserved hypothetical protein; InterPro IPR005182; KEGG: sen:SACE_1222 membrane-flanked domain-containing protein; PFAM: membrane-flanked domain; SPTR: C1YV87 Uncharacterized conserved protein; PFAM: Bacterial membrane flanked domain
YP_003680180.1	COGs: COG3428 membrane protein; InterPro IPR005182; KEGG: svi:Svir_14500 predicted membrane protein; PFAM: membrane-flanked domain; SPTR: C1YV86 Predicted membrane protein, COG3428; PFAM: Bacterial membrane flanked domain
YP_003680181.1	COGs: COG1366 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645:IPR003658; KEGG: tfu:Tfu_1429 anti-sigma factor antagonist; PFAM: sulfate transporter/antisigma-factor antagonist STAS; SPTR: C1YV85 anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_003680182.1	KEGG: sro:Sros_4212 hypothetical protein; SPTR: C1YV84  uncharacterized protein
YP_003680183.1	COGs: COG1072 Panthothenate kinase; KEGG: gbr:Gbro_1817 hypothetical protein; SPTR: C1YV83  uncharacterized protein
YP_003680184.1	InterPro IPR005828:IPR005829:IPR004736:IPR016196; KEGG: sen:SACE_5135 metabolite transporter YhjE; PFAM: general substrate transporter; SPTR: C1YV82 Metabolite-proton symporter; TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: Sugar (and other) transporter; TIGRFAM: metabolite-proton symporter
YP_003680185.1	COGs: COG1052 lactate dehydrogenase and related dehydrogenase; InterPro IPR016040:IPR006140:IPR006139; KEGG: ank:AnaeK_2002 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: C1YV81 lactate dehydrogenase-like oxidoreductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_003680186.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013785; KEGG: mbt:JTY_3534 4-hydroxy-2-oxovalerate aldolase; PFAM: pyruvate carboxyltransferase; SPTR: C1YV80 Isopropylmalate/homocitrate/citramalate synthase; PFAM: HMGL-like
YP_003680187.1	KEGG: tfu:Tfu_3033 helix-hairpin-helix DNA-binding motif-containing protein; SPTR: C1YV79  uncharacterized protein
YP_003680188.1	InterPro IPR001845:IPR011991; KEGG: svi:Svir_27620 predicted transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: C1YV78 transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family
YP_003680189.1	InterPro IPR011701:IPR016196; KEGG: stp:Strop_0656 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YV77 Arabinose efflux permease family protein; PFAM: Bacterial protein of unknown function (DUF894)
YP_003680190.1	InterPro IPR011009:IPR002575; KEGG: ach:Achl_2966 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: C1YV76 phosphotransferase family protein; PFAM: phosphotransferase enzyme family
YP_003680191.1	COGs: COG4976 methyltransferase (contains TPR repeat); InterPro IPR013216; KEGG: fal:FRAAL6791  methyltransferase; PFAM: methyltransferase type 11; SPTR: C1YV75 methyltransferase family protein; PFAM: methyltransferase domain
YP_003680192.1	COGs: COG0030 dimethyladenosine transferase (rRNA methylation); InterPro IPR001737:IPR020598:IPR020596; KEGG: tcu:Tcur_0508 rRNA (adenine-N(6)-)-methyltransferase; PFAM: ribosomal RNA adenine methylase transferase; PRIAM: rRNA (adenine-N(6)-)-methyltransferase; SMART: ribosomal RNA adenine methylase transferase-like; SPTR: C1YV74 dimethyladenosine transferase (RRNA methylation); PFAM: ribosomal RNA adenine dimethylase
YP_003680193.1	KEGG: rce:RC1_0573 branched-chain-amino-acid aminotransferase, SPTR: C1YV73  uncharacterized protein
YP_003680194.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073:IPR000639; KEGG: sen:SACE_5137 oxidoreductase; PFAM: alpha/beta hydrolase fold; SPTR: C1YV72 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003680195.1	COGs: COG0296 1 4-alpha-glucan branching enzyme; InterProIPR004193:IPR006047:IPR012768:IPR013783:IPR 013781:IPR006589:IPR017853:IPR014756; KEGG: ami:Amir_5112 malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain; SPTR: C1YV71 Maltooligosyl trehalose hydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: carbohydrate-binding module 48 (Isoamylase N-terminal domain); alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose trehalohydrolase
YP_003680196.1	InterPro IPR016718:IPR000408; KEGG: sen:SACE_1994 rRNA guanine-N1-methyltransferase; SPTR: C1YV70 23S rRNA m(1)G-748 methyltransferase
YP_003680197.1	COGs: COG3280 Maltooligosyl trehalose synthase; InterPro IPR012767:IPR006047:IPR013781:IPR017853; KEGG: ami:Amir_5113 malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SPTR: C1YV69 Maltooligosyl trehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose synthase
YP_003680198.1	COGs: COG0226 ABC-type phosphate transporter periplasmic component; InterPro IPR006059:IPR005673; KEGG: tfu:Tfu_1636 periplasmic phosphate binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: C1YV68 phosphate-binding protein; TIGRFAM: phosphate ABC transporter periplasmic phosphate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate ABC transporter phosphate-binding protein
YP_003680199.1	COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: tfu:Tfu_1639 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: C1YV67 Predicted glycosyltransferase; PFAM: glycosyl transferase family 2
YP_003680200.1	KEGG: lxx:Lxx24480 hypothetical protein; SPTR: C1YV66  uncharacterized protein
YP_003680201.1	COGs: COG0791 cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: tfu:Tfu_1030 NLP/P60 family secreted protein; PFAM: NLP/P60 protein; SPTR: C1YV65 cell wall-associated hydrolase, invasion-associated protein; PFAM: NlpC/P60 family
YP_003680202.1	COGs: COG1506 dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011042:IPR001375:IPR011659; KEGG: ami:Amir_5512 peptidase S9 prolyl oligopeptidase active site domain protein; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; PRIAM: acylaminoacyl-peptidase; SPTR: C1YV64 dipeptidyl aminopeptidase/acylaminoacyl peptidase; PFAM: prolyl oligopeptidase family; WD40-like beta Propeller Repeat
YP_003680203.1	KEGG: sro:Sros_1421 hypothetical protein; SPTR: C1YUZ1  uncharacterized protein
YP_003680204.1	COGs: COG0584 glycerophosphoryl diester phosphodiesterase; InterPro IPR004129:IPR017946; KEGG: tfu:Tfu_1757  glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase; SPTR: C1YUZ0 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase family
YP_003680205.1	COGs: COG2270 Permease of the major facilitator superfamily; InterPro IPR011701:IPR016196; KEGG: sro:Sros_5507 major facilitator superfamily permease/BtlA-like protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YUY9 Major facilitator superfamily permease; PFAM: Vacuole effluxer Atg22 like
YP_003680206.1	InterPro IPR002711:IPR003615; KEGG: fal:FRAAL4530 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: C1YJ79 HNH endonuclease; PFAM: HNH endonuclease; Domain of unknown function DUF222
YP_003680207.1	COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR000330:IPR001650:IPR014021:IPR014001; KEGG: tcu:Tcur_3580 SNF2-related protein; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase; SPTR: C1YUY6 DNA/RNA helicase, superfamily II, SNF2 family; PFAM: SNF2 Helicase protein; Helicase conserved C-terminal domain; SNF2 family N-terminal domain
YP_003680208.1	COGs: COG4279 conserved hypothetical protein; InterPro IPR007527; KEGG: saq:Sare_3602 zinc finger SWIM domain-containing protein; PFAM: zinc finger SWIM domain protein; SPTR: C1YUY5 Uncharacterized conserved protein
YP_003680209.1	InterPro IPR006764; KEGG: sen:SACE_4440 hypothetical protein; PFAM: protein of unknown function DUF574; SPTR: C1YUY4 methyltransferase family protein; PFAM: protein of unknown function (DUF574)
YP_003680210.1	COGs: COG0599 gamma-carboxymuconolactone decarboxylase subunit; InterPro IPR003779; KEGG: msm:MSMEG_2604 4-carboxymuconolactone decarboxylase; PFAM: carboxymuconolactone decarboxylase; SPTR: C1YUY3 4-carboxymuconolactone decarboxylase; PFAM: carboxymuconolactone decarboxylase family
YP_003680211.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR012790:IPR000073; KEGG: rxy:Rxyl_1578 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; SPTR: C1YUY2 3-oxoadipate enol-lactonase; TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; TIGRFAM: 3-oxoadipate enol-lactonase
YP_003680212.1	COGs: COG2057 acyl CoA:acetate/3-ketoacid CoA transferase subunit beta; InterPro IPR004165; KEGG: sro:Sros_7929 3-oxoadipate CoA-transferase; PFAM: coenzyme A transferase; SPTR: C1YUY0 acyl CoA:acetate/3-ketoacid CoA transferase subunit beta; PFAM: Coenzyme A transferase
YP_003680213.1	COGs: COG1788 acyl CoA:acetate/3-ketoacid CoA transferase subunit alpha; InterPro IPR004165; KEGG: svi:Svir_12980 acyl CoA:acetate/3-ketoacid CoA transferase, subunit alpha; PFAM: coenzyme A transferase; SMART: coenzyme A transferase; SPTR: C1YUX9 acyl CoA:acetate/3-ketoacid CoA transferase, subunit alpha; PFAM: Coenzyme A transferase
YP_003680214.1	KEGG: sen:SACE_5947 hypothetical protein; SPTR: C1YUX8  uncharacterized protein
YP_003680215.1	COGs: COG1414 transcriptional regulator; InterPro IPR005471:IPR014757:IPR012794; KEGG: svi:Svir_13060 IclR family transcriptional regulator; PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; SPTR: C1YUX7 IclR family transcriptional regulator; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family
YP_003680216.1	InterPro IPR010852; KEGG: rop:ROP_21400 hypothetical protein; PFAM: protein of unknown function DUF1470; SPTR: C1YUX6  uncharacterized protein; PFAM: protein of unknown function (DUF1470); CGNR zinc finger
YP_003680217.1	SPTR: C1YUX5  uncharacterized protein
YP_003680218.1	COGs: COG3602 conserved hypothetical protein; InterPro IPR018717; KEGG: pap:PSPA7_4935 hypothetical protein; PFAM: protein of unknown function DUF2241; SPTR: C1YUX4 Uncharacterized conserved protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2241)
YP_003680219.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395:IPR020471; KEGG: nfa:nfa3270  oxidoreductase; PFAM: aldo/keto reductase; SPTR: C1YUX3 Predicted oxidoreductase similar to aryl-alcohol dehydrogenase; PFAM: Aldo/keto reductase family
YP_003680220.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395:IPR020471; KEGG: nfa:nfa3270  oxidoreductase; PFAM: aldo/keto reductase; SPTR: C1YUX2 Predicted oxidoreductase similar to aryl-alcohol dehydrogenase; PFAM: Aldo/keto reductase family
YP_003680221.1	COGs: COG1670 acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182:IPR016181; KEGG: tfu:Tfu_0903  acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YUX1 acetyltransferase, ribosomal protein N-acetylase; PFAM: acetyltransferase (GNAT) family
YP_003680222.1	COGs: COG0366 glycosidase; InterPro IPR006589:IPR006047:IPR013781:IPR017853; KEGG: sro:Sros_3328 maltodextrin glucosidase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: C1YUX0 glycosidase; PFAM: alpha amylase, catalytic domain
YP_003680223.1	KEGG: sco:SCO7796 hypothetical protein; SPTR: C1YUW9  uncharacterized protein
YP_003680224.1	COGs: COG3208 thioesterase involved in non-ribosomal peptide biosynthesis; InterPro IPR001031; KEGG: cai:Caci_0527 thioesterase; PFAM: thioesterase; SPTR: C1YUW8 Predicted thioesterase involved in non-ribosomal peptide biosynthesis; PFAM: thioesterase domain
YP_003680225.1	KEGG: sro:Sros_0062  membrane transport protein; SPTR: C1YUW7  uncharacterized protein
YP_003680226.1	KEGG: nml:Namu_1276 hypothetical protein; SPTR: C1YUW6  uncharacterized protein
YP_003680227.1	KEGG: ami:Amir_4678 hypothetical protein; SPTR: C1YUW5  uncharacterized protein
YP_003680228.1	COGs: COG3254 conserved hypothetical protein; InterPro IPR008000; KEGG: sco:SCO0807 hypothetical protein; PFAM: protein of unknown function DUF718; SPTR: C1YUW4 Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF718)
YP_003680229.1	COGs: COG1879 ABC-type sugar transporter periplasmic component; InterPro IPR013459; KEGG: ami:Amir_3044 rhamnose ABC transporter periplasmic rhamnose-binding protein; SPTR: C1YUW3 Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TIGRFAM: rhamnose ABC transporter periplasmic rhamnose-binding protein; TIGRFAM: rhamnose ABC transporter rhamnose-binding protein
YP_003680230.1	COGs: COG1172 ribose/xylose/arabinose/galactoside ABC-type transporters permeases; InterPro IPR001851; KEGG: ami:Amir_3043 monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; SPTR: C1YUW2 Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: Branched-chain amino acid transporter / permease component
YP_003680231.1	COGs: COG1172 ribose/xylose/arabinose/galactoside ABC-type transporters permeases; InterPro IPR001851; KEGG: ami:Amir_3042 monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; SPTR: C1YUW1 Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: Branched-chain amino acid transporter / permease component
YP_003680232.1	COGs: COG1129 ABC-type sugar transporter ATPase component; InterPro IPR003439:IPR015861:IPR003593:IPR017871; KEGG: ami:Amir_3041 ABC transporter; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YUW0 Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter
YP_003680233.1	COGs: COG1609 transcriptional regulators; InterPro IPR000843:IPR001761:IPR010982; KEGG: ami:Amir_0975 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: C1YUV9 LacI family transcriptional regulator; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003680234.1	KEGG: sen:SACE_3045 hypothetical protein; SPTR: C1YUV8  uncharacterized protein
YP_003680235.1	KEGG: sen:SACE_3044 DNA-binding protein; SPTR: C1YUV7  uncharacterized protein; PFAM: protein of unknown function (DUF3140)
YP_003680236.1	InterPro IPR007278; KEGG: tfu:Tfu_1802 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YUV6  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003680237.1	InterPro IPR001387:IPR010982; KEGG: tfu:Tfu_1248 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YUV5 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003680238.1	KEGG: pik3cb; phosphoinositide-3-kinase, catalytic, beta polypeptide ; K00922 phosphatidylinositol-4,5-bisphosphate 3-kinase; SPTR: C1YUV4  uncharacterized protein
YP_003680239.1	COGs: COG4637 ATPase; InterPro IPR014555:IPR003395; KEGG: app:CAP2UW1_2687 SMC domain protein; PFAM: SMC domain protein; SPTR: C1YUV3 Predicted ATPase, COG4637
YP_003680240.1	KEGG: app:CAP2UW1_2688 hypothetical protein; SPTR: C1YUV2  uncharacterized protein
YP_003680241.1	COGs: COG1670 acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182:IPR016181; KEGG: sco:SCO7447 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YUV1 acetyltransferase, ribosomal protein N-acetylase; PFAM: acetyltransferase (GNAT) family
YP_003680242.1	KEGG: sgr:SGR_6954 hypothetical protein; SPTR: C1YUV0  uncharacterized protein
YP_003680243.1	InterPro IPR011701:IPR016196; KEGG: rha:RHA1_ro02424 major facilitator superfamily multidrug resistance protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YUU9 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily
YP_003680244.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR000005:IPR018060:IPR020449:IPR009057:IPR 018062; KEGG: rer:RER_03150 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C1YUU8 AraC family transcriptional regulator; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_003680245.1	COGs: COG0614 ABC-type Fe3+-hydroxamate transporter periplasmic component; InterPro IPR002491; KEGG: ami:Amir_4296 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: C1YUU7 ABC-type Fe3+-hydroxamate transporter periplasmic component; PFAM: Periplasmic binding protein
YP_003680246.1	COGs: COG0609 ABC-type Fe3+-siderophore transporter permease; InterPro IPR000522:IPR002202; KEGG: rer:RER_03170 iron-siderophore ABC transporter permease; PFAM: transporter permease; SPTR: C1YUU6 ABC-type Fe3+-siderophore transporter permease; PFAM: FecCD transport family
YP_003680247.1	COGs: COG4779 ABC-type enterobactin transporter permease; InterPro IPR000522; KEGG: rer:RER_03180 iron-siderophore ABC transporter permease; PFAM: transporter permease protein; SPTR: C1YUU5 ABC-type enterobactin transporter permease component; PFAM: FecCD transport family
YP_003680248.1	COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; InterPro IPR003439:IPR003593:IPR017871; KEGG: sgr:SGR_6618  ABC-type Fe3+-siderophore transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YUU4 ABC-type cobalamin/Fe3+-siderophore transporter ATPase component; PFAM: ABC transporter
YP_003680249.1	KEGG: SORBIDRAFT_09g024965; hypothetical protein; SPTR: C1YUU3  uncharacterized protein
YP_003680250.1	COGs: COG2133 glucose/sorbosone dehydrogenase; InterProIPR008979:IPR000601:IPR010496:IPR011041:IPR 011042:IPR006584:IPR005084; KEGG: svi:Svir_11080 glucose/sorbosone dehydrogenase; PFAM: protein of unknown function DUF1080; PKD domain containing protein; carbohydrate binding family 6; SMART: cellulose binding type IV; PKD domain containing protein; SPTR: C1YUU2 glucose/sorbosone dehydrogenase; PFAM: Trehalose utilisation; Domain of Unknown Function (DUF1080); carbohydrate binding module (family 6); PKD domain
YP_003680251.1	KEGG: sen:SACE_5463 hypothetical protein; SPTR: C1YUU1  uncharacterized protein
YP_003680252.1	COGs: COG1260 myo-inositol-1-phosphate synthase; InterPro IPR002587:IPR013021:IPR016040; KEGG: sco:SCO3243 myo-inositol phosphate synthase; PFAM: myo-inositol-1-phosphate synthase; myo-inositol-1-phosphate synthase GAPDH domain protein; PRIAM: inositol-3-phosphate synthase; SPTR: C1YUU0 myo-inositol-1-phosphate synthase; PFAM: myo-inositol-1-phosphate synthase
YP_003680253.1	InterPro IPR000537; KEGG: svi:Svir_11100 4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; PFAM: UbiA prenyltransferase; SPTR: C1YUT9 4-hydroxybenzoate polyprenyltransferase-like prenyltransferase (Fragment); PFAM: UbiA prenyltransferase family
YP_003680254.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR013022:IPR012307; KEGG: svi:Svir_11110 sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase domain protein TIM barrel; SPTR: C1YMK7 Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel
YP_003680255.1	KEGG: sen:SACE_2995 sugar phosphate isomerases/epimerases; SPTR: C1YMK6  uncharacterized protein
YP_003680256.1	COGs: COG1099 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR012022:IPR001130; KEGG: svi:Svir_11120 predicted metal-dependent hydrolase with TIM-barrel fold protein; PFAM: TatD-related deoxyribonuclease; SPTR: C1YMK5 Predicted metal-dependent hydrolase with TIM-barrel fold; PFAM: TatD related DNase
YP_003680257.1	InterPro IPR012307:IPR013022:IPR018246; KEGG: sco:SCO3238 hypothetical protein; PFAM: xylose isomerase; SPTR: C1YMK4 Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel
YP_003680258.1	COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR017850:IPR017849:IPR002591; KEGG: sen:SACE_2998 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: C1YMK3 Uncharacterized AP superfamily protein; PFAM: type I phosphodiesterase / nucleotide pyrophosphatase
YP_003680259.1	COGs: COG0235 ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: ami:Amir_3731 class II aldolase/adducin family protein; PFAM: class II aldolase/adducin family protein; SPTR: C1YMK2 ribulose-5-phosphate 4-epimerase-like epimerase or aldolase; PFAM: class II Aldolase and Adducin N-terminal domain
YP_003680260.1	COGs: COG3395 conserved hypothetical protein; InterPro IPR010737; KEGG: reh:H16_A1561 hypothetical protein; PFAM: type III effector Hrp-dependent outers; SPTR: C1YMK1 Uncharacterized conserved protein; PFAM: protein of unknown function, DUF1537
YP_003680261.1	COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: pmo:Pmob_0535 gluconate transporter; PFAM: gluconate transporter; SPTR: C1YMJ8 H+/gluconate symporter family protein; PFAM: GntP family permease; TIGRFAM: gluconate transporter
YP_003680262.1	COGs: COG4091 homoserine dehydrogenase; InterPro IPR016040; KEGG: rru:Rru_A3141 homoserine dehydrogenase, NAD-binding; SPTR: C1YMJ7 Predicted homoserine dehydrogenase; PFAM: homoserine dehydrogenase, NAD binding domain
YP_003680263.1	COGs: COG1349 transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR018356:IPR014036; KEGG: psp:PSPPH_4844 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: C1YMJ6 transcriptional regulator, DeoR family; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_003680264.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR013022; KEGG: kra:Krad_3722 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain protein TIM barrel; SPTR: C1YMJ5 Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel
YP_003680265.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683:IPR004104; KEGG: kra:Krad_3721 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; oxidoreductase domain; SPTR: C1YMJ4 Predicted dehydrogenase; PFAM: oxidoreductase family, NAD-binding Rossmann fold
YP_003680266.1	InterPro IPR001647:IPR012287:IPR009057:IPR011075; KEGG: kra:Krad_3720 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YMJ3 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003680267.1	InterPro IPR000408; KEGG: afo:Afer_1738 hypothetical protein; SPTR: C1YMJ2  uncharacterized protein
YP_003680268.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639:IPR000073; KEGG: rop:ROP_03450  hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YMJ1 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003680269.1	COGs: COG0238 ribosomal protein S18; InterPro IPR001648:IPR018275; KEGG: sgr:SGR_549  30S ribosomal protein S18; PFAM: ribosomal protein S18; SPTR: C1YMJ0 30S ribosomal protein S18P; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; TIGRFAM: ribosomal protein S18
YP_003680270.1	KEGG: car:cauri_1152 hypothetical protein; SPTR: C1YMI9  uncharacterized protein
YP_003680271.1	InterPro IPR013217; KEGG: stp:Strop_2656 methyltransferase type 12; PFAM: methyltransferase type 12; SPTR: C1YMI8 methyltransferase family protein
YP_003680272.1	COGs: COG1609 transcriptional regulators; InterPro IPR000843:IPR001761:IPR010982; KEGG: ami:Amir_1824 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: C1YMI7 LacI family transcriptional regulator; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003680273.1	COGs: COG1653 ABC-type sugar transporter periplasmic component; InterPro IPR006059; KEGG: sco:SCO7028 sugar-binding lipoprotein; PFAM: extracellular solute-binding protein family 1; SPTR: C1YMI6 carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein
YP_003680274.1	COGs: COG1175 ABC-type sugar transporters permease components; InterPro IPR000515; KEGG: sco:SCO7029 binding-protein-dependent transporter; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YMI5 carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003680275.1	COGs: COG0395 ABC-type sugar transporter permease component; InterPro IPR000515; KEGG: sco:SCO7030 binding-protein-dependent transporter; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YMI4 carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003680276.1	InterPro IPR007805; KEGG: sco:SCO6508 gas vesicle synthesis protein; PFAM: Gas vesicle K; SPTR: C1YMI3 Gas vesicle protein K; PFAM: Gas vesicle protein K
YP_003680277.1	InterPro IPR000638; KEGG: sma:SAV_592 gas vesicle synthesis protein; PFAM: gas vesicle protein GVPa; SPTR: C1YMI2 Gas vesicle protein; PFAM: Gas vesicle protein
YP_003680278.1	InterPro IPR009430; KEGG: sco:SCO6506 gas vesicle protein; PFAM: Gas vesicle synthesis GvpLGvpF; SPTR: C1YMI1 Gas vesicle synthesis protein GvpL/GvpF; PFAM: Gas vesicle synthesis protein GvpL/GvpF
YP_003680279.1	InterPro IPR018493:IPR000638; KEGG: sma:SAV_594 gas vesicle synthesis protein; PFAM: gas vesicle protein GVPa; SPTR: C1YMI0 Gas vesicle protein; PFAM: Gas vesicle protein
YP_003680280.1	InterPro IPR005031; KEGG: sma:SAV_1885 hypothetical protein; PFAM: cyclase/dehydrase; SPTR: C1YMH9 polyketide cyclase / dehydrase family protein; PFAM: polyketide cyclase / dehydrase and lipid transport
YP_003680281.1	KEGG: sma:SAV_1886 hypothetical protein; SPTR: C1YMH8  uncharacterized protein
YP_003680282.1	InterPro IPR007804; KEGG: sco:SCO6502 gas vesicle synthesis protein; PFAM: Gas vesicle G; SPTR: C1YMH7 Gas vesicle protein G; PFAM: Gas vesicle protein G
YP_003680283.1	InterPro IPR009430; KEGG: sma:SAV_1888 gas vesicle synthesis protein; PFAM: Gas vesicle synthesis GvpLGvpF; SPTR: C1YMH6 Gas vesicle synthesis protein GvpL/GvpF; PFAM: Gas vesicle synthesis protein GvpL/GvpF
YP_003680284.1	InterPro IPR018493:IPR000638; KEGG: sma:SAV_1889 gas vesicle synthesis-like protein; PFAM: gas vesicle protein GVPa; SPTR: C1YMH5 Gas vesicle protein; PFAM: Gas vesicle protein
YP_003680285.1	InterPro IPR008634; KEGG: sma:SAV_1890 gas vesicle synthesis protein; PFAM: Gas vesicle synthesis family protein; SPTR: C1YMH4 Gas vesicle synthesis protein GvpO; PFAM: Gas vesicle synthesis protein GvpO
YP_003680286.1	COGs: COG0191 fructose/tagatose bisphosphate aldolase; InterPro IPR000771:IPR013785; KEGG: kra:Krad_2157 ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; PRIAM: Tagatose-bisphosphate aldolase; SPTR: C1YMH3 fructose-bisphosphate aldolase; TIGRFAM: ketose-bisphosphate aldolase; PFAM: fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases
YP_003680287.1	COGs: COG1105 fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); InterPro IPR011611:IPR017583:IPR002173; KEGG: sgr:SGR_4054  sugar kinase; PFAM: PfkB domain protein; SPTR: C1YMH2 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase
YP_003680288.1	COGs: COG1940 transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: sen:SACE_7183 transcriptional regulator; PFAM: ROK family protein; SPTR: C1YMH1 transcriptional regulator/sugar kinase; PFAM: ROK family; TIGRFAM: ROK family protein ( glucokinase)
YP_003680289.1	COGs: COG2222 phosphosugar isomerase; InterPro IPR001347; KEGG: kra:Krad_2161 sugar isomerase (SIS); PFAM: sugar isomerase (SIS); SPTR: C1YMH0 Predicted phosphosugar isomerase; PFAM: SIS domain
YP_003680290.1	COGs: COG1349 transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR018356:IPR014036; KEGG: cai:Caci_0893 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: C1YMG9 transcriptional regulator, DeoR family; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_003680291.1	COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR001540:IPR015883:IPR013781:IPR017853; KEGG: bcv:Bcav_1293 beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase, family 20, catalytic core; PRIAM: beta-N-acetylhexosaminidase; SPTR: C1YMG8 N-acetyl-beta-hexosaminidase; PFAM: glycosyl hydrolase family 20, catalytic domain; glycosyl hydrolase family 20, domain 2
YP_003680292.1	COGs: COG0395 ABC-type sugar transporter permease component; InterPro IPR000515; KEGG: svi:Svir_16640 ABC-type sugar transport system, permease; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YMG7 carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003680293.1	COGs: COG1653 ABC-type sugar transporter periplasmic component; InterPro IPR006059:IPR006061; KEGG: svi:Svir_16660 ABC-type sugar transporter periplasmic component; PFAM: extracellular solute-binding protein family 1; SPTR: C1YMG6 carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein
YP_003680294.1	InterPro IPR001387; KEGG: sco:SCO0233 DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YMG5 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003680295.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002198:IPR002347; KEGG: sco:SCO0235 short chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YMG4  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003680296.1	KEGG: nfa:nfa16540 hypothetical protein; SPTR: C1YMG3  uncharacterized protein
YP_003680297.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR004638:IPR001411:IPR016196; KEGG: sgr:SGR_5270 major facilitator superfamily permease; PFAM: major facilitator superfamily MFS_1; SPTR: C1YMG2 Drug resistance transporter EmrB/QacA subfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily
YP_003680298.1	COGs: COG0786 Na+/glutamate symporter; InterPro IPR004445; KEGG: oih:OB3170 hypothetical protein; PFAM: sodium/glutamate symporter; SPTR: C1YMG1 Na+/glutamate symporter; TIGRFAM: sodium--glutamate symport carrier (gltS)
YP_003680299.1	COGs: COG0665 glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: sti:Sthe_2218 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: C1YMG0 glycine/D-amino acid oxidase deaminating; PFAM: FAD dependent oxidoreductase
YP_003680300.1	COGs: COG1737 transcriptional regulators; InterPro IPR000281:IPR001347; KEGG: sgr:SGR_3009  transcriptional regulator; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); SPTR: C1YMF9 transcriptional regulator; PFAM: SIS domain; Helix-turn-helix domain, rpiR family
YP_003680301.1	InterPro IPR006764; KEGG: stp:Strop_1644 hypothetical protein; PFAM: protein of unknown function DUF574; SPTR: C1YMF8  uncharacterized protein; PFAM: protein of unknown function (DUF574)
YP_003680302.1	KEGG: sco:SCP1.184 hypothetical protein; SPTR: C1YMF7  uncharacterized protein
YP_003680303.1	KEGG: sma:SAV_5196 hypothetical protein; SPTR: C1YMF6  uncharacterized protein
YP_003680304.1	InterPro IPR001387:IPR010982; KEGG: sco:SCO2869 regulatory protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YMF5 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003680305.1	KEGG: Pc18g05200; SPTR: C1YMF4  uncharacterized protein
YP_003680306.1	KEGG: similar to splicing coactivator subunit SRm300; K13172 serine/arginine repetitive matrix protein 2; SPTR: C1YMF2  uncharacterized protein
YP_003680307.1	COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484; KEGG: sco:SCO0814 rhamnose kinase; PFAM: carbohydrate kinase, FGGY-like; SPTR: C1YMF1 Pentulose/hexulose kinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain
YP_003680308.1	COGs: COG3347 conserved hypothetical protein; InterProIPR001303:IPR002198:IPR013454:IPR016040:IPR 002347:IPR006162; KEGG: sco:SCO0813 short chain dehydrogenase; PFAM: class II aldolase/adducin family protein; short-chain dehydrogenase/reductase SDR; SPTR: C1YMF0 Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: class II Aldolase and Adducin N-terminal domain; short chain dehydrogenase; TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase
YP_003680309.1	COGs: COG4952 sugar isomerase; InterPro IPR012307:IPR013457:IPR013022; KEGG: sro:Sros_0428 L-rhamnose isomerase; PFAM: xylose isomerase; SPTR: C1YME9 L-rhamnose isomerase; TIGRFAM: L-rhamnose isomerase; TIGRFAM: L-rhamnose isomerase, Streptomyces subtype
YP_003680310.1	COGs: COG1279 lysine efflux permease; InterPro IPR001123; KEGG: aau:AAur_1006 LysE family translocator protein; PFAM: lysine exporter protein (LYSE/YGGA); SPTR: C1YME8 lysine efflux permease; PFAM: LysE type translocator; TIGRFAM: L-lysine exporter
YP_003680311.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR017685:IPR005119:IPR011991; KEGG: aau:AAur_1007 chromosome replication initiation inhibitor protein; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: C1YME7 transcriptional regulator, LysR family; TIGRFAM: transcriptional regulator, ArgP family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; TIGRFAM: transcriptional regulator, ArgP family
YP_003680312.1	InterPro IPR011251:IPR019922; KEGG: svi:Svir_38250 flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; SPTR: C1YME6  uncharacterized protein; TIGRFAM:  F420-dependent oxidoreductase; PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_4141 family
YP_003680313.1	COGs: COG2367 beta-lactamase class A; InterPro IPR012338; KEGG: stp:Strop_1458 beta-lactamase; SPTR: C1YME5 beta-lactamase class A
YP_003680314.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR011991; KEGG: ami:Amir_3961 transcriptional regulator, LysR family; PFAM: regulatory protein LysR; SPTR: C1YME4 transcriptional regulator, COG0583; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family
YP_003680315.1	COGs: COG2367 beta-lactamase class A; InterPro IPR001466:IPR000871:IPR012338; KEGG: saq:Sare_1418 beta-lactamase; PFAM: beta-lactamase; PRIAM: beta-lactamase; SPTR: C1YME3 beta-lactamase class A; PFAM: beta-lactamase
YP_003680316.1	COGs: COG2367 beta-lactamase class A; InterPro IPR001466:IPR000871:IPR012338; KEGG: kra:Krad_1931 beta-lactamase; PFAM: beta-lactamase; PRIAM: beta-lactamase; SPTR: C1YME2 beta-lactamase class A; PFAM: beta-lactamase
YP_003680317.1	KEGG: rha:RHA1_ro01454 hypothetical protein; SPTR: C1YME1  uncharacterized protein
YP_003680318.1	KEGG: cai:Caci_5111 lipoprotein; SPTR: C1YME0  uncharacterized protein
YP_003680319.1	KEGG: nml:Namu_0922 hypothetical protein; SPTR: C1YMD9  uncharacterized protein
YP_003680320.1	InterPro IPR017909:IPR006311:IPR002502; KEGG: svi:Svir_35340 negative regulator of beta-lactamase expression; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; SPTR: C1YMD8 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003680321.1	InterPro IPR000835; KEGG: sro:Sros_3478 hypothetical protein; SMART: regulatory protein MarR; SPTR: C1YMD7 transcriptional regulator
YP_003680322.1	KEGG: sro:Sros_3477 hypothetical protein; SPTR: C1YMD6  uncharacterized protein; PFAM: Predicted integral membrane protein (DUF2269)
YP_003680323.1	COGs: COG1062 Zn-dependent alcohol dehydrogenase class III; InterProIPR013154:IPR013149:IPR017816:IPR011032:IPR 016040:IPR002328; KEGG: sro:Sros_1329 alcohol dehydrogenase class 3; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; SPTR: C1YMD5 Mycothiol-dependent formaldehyde dehydrogenase; TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase
YP_003680324.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: sgr:SGR_5825  hydrolase; SPTR: C1YMD4 Zn-dependent hydrolase, glyoxylase; PFAM: metallo-beta-lactamase superfamily
YP_003680325.1	KEGG: cai:Caci_0480 hypothetical protein; SPTR: C1YMD3  uncharacterized protein
YP_003680326.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR004812:IPR016196:IPR005829; KEGG: tfu:Tfu_1728 Bcr/CflA subfamily drug resistance transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YMD2 Drug resistance transporter Bcr/CflA subfamily; TIGRFAM: drug resistance transporter Bcr/CflA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter Bcr/CflA subfamily; Multidrug resistance protein
YP_003680327.1	KEGG: mmi:MMAR_5319 hypothetical protein; SPTR: C1YMD1  uncharacterized protein
YP_003680328.1	COGs: COG4912 DNA alkylation repair protein; InterPro IPR016024:IPR014825; KEGG: saq:Sare_2110 DNA alkylation repair enzyme; PFAM: DNA alkylation repair enzyme; SPTR: C1YMD0 Predicted DNA alkylation repair enzyme; PFAM: DNA alkylation repair enzyme
YP_003680329.1	COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterProIPR007627:IPR007624:IPR007630:IPR014322:IPR 014284:IPR011991:IPR000943:IPR013325:IPR013324; KEGG: sco:SCO5243 RNA polymerase sigma factor; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; SPTR: C1YMC9 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; TIGRFAM: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily
YP_003680330.1	COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: bcv:Bcav_1222 cation diffusion facilitator family transporter; PFAM: cation efflux protein; SPTR: C1YMC8 Cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_003680331.1	InterProIPR001647:IPR004111:IPR012287:IPR003012:IPR 011075:IPR009057; KEGG: scl:sce6697  transcriptional regulator; PFAM: Tetracyclin repressor domain protein; regulatory protein TetR; SPTR: C1YMC7 transcriptional regulator, COG1309; PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family
YP_003680332.1	InterPro IPR003675; KEGG: amt:Amet_1544 abortive infection protein; PFAM: hypothetical protein; SPTR: C1YMC6 Predicted metal-dependent membrane protease; PFAM: CAAX amino terminal protease family
YP_003680333.1	COGs: COG0318 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: svi:Svir_08640 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YMC5 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme
YP_003680334.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: sgr:SGR_1103  bromoperoxidase; PFAM: alpha/beta hydrolase fold; SPTR: C1YMC4 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003680335.1	COGs: COG1893 Ketopantoate reductase; InterProIPR013332:IPR013752:IPR003710:IPR016040:IPR 013328:IPR008927; KEGG: bja:blr0589 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase; PRIAM: 2-dehydropantoate 2-reductase; SPTR: C1YMC3 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase
YP_003680336.1	KEGG: sgr:SGR_3951 hypothetical protein; SPTR: C1YMC2  uncharacterized protein
YP_003680337.1	KEGG: sgr:SGR_3951 hypothetical protein; SPTR: C1YMC1  uncharacterized protein
YP_003680338.1	InterPro IPR017909; KEGG: sgr:SGR_3951 hypothetical protein; SPTR: C1YMC0  uncharacterized protein
YP_003680339.1	COGs: COG3629 DNA-binding transcriptional activator of the SARP family; InterPro IPR001867:IPR005158:IPR016032; KEGG: ami:Amir_0205 SARP family transcriptional regulator; PFAM: transcriptional activator domain; transcriptional regulator; SPTR: C1YMB9 DNA-binding transcriptional activator of the SARP family; PFAM: Bacterial transcriptional activator domain; transcriptional regulatory protein, C terminal
YP_003680340.1	KEGG: sen:SACE_0488 SARP family transcriptional regulator; SPTR: C1YMB8  uncharacterized protein; PFAM: NB-ARC domain
YP_003680341.1	COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030:IPR016040; KEGG: nca:Noca_0421 NmrA family protein; PFAM: NmrA family protein; SPTR: C1YMB7 Predicted nucleoside-diphosphate sugar epimerase; PFAM: NmrA-like family
YP_003680342.1	COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: aav:Aave_1296 HxlR family transcriptional regulator; PFAM: helix-turn-helix HxlR type; SPTR: C1YMB6 Predicted transcriptional regulator; PFAM: HxlR-like helix-turn-helix
YP_003680343.1	COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198:IPR016040:IPR002347; KEGG: sen:SACE_4600 short chain dehydrogenase/reductase family oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YMB5 Short-chain alcohol dehydrogenase; PFAM: short chain dehydrogenase
YP_003680344.1	InterPro IPR001387; KEGG: sen:SACE_4599 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YMB4 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003680345.1	COGs: COG0302 GTP cyclohydrolase I; InterPro IPR018234:IPR020602; KEGG: fra:Francci3_1748 GTP cyclohydrolase; PFAM: GTP cyclohydrolase I/nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: C1YMB3 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I
YP_003680346.1	COGs: COG0603 PP-loop superfamily ATPase; InterPro IPR014729:IPR004479:IPR018317; KEGG: rlg:Rleg_3788 ExsB protein; PFAM: Queuosine synthesis-like; SPTR: C1YMB1 PreQ(0) biosynthesis protein QueC; TIGRFAM: exsB protein; PFAM: ExsB; TIGRFAM: exsB protein
YP_003680347.1	COGs: COG3899 ATPase; InterPro IPR011717:IPR000792:IPR011991:IPR016032; KEGG: sen:SACE_2899 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; Tetratricopeptide TPR_4; SMART: regulatory protein LuxR; SPTR: C1YMB0 transcriptional regulator, luxR family; PFAM: Bacterial regulatory proteins, luxR family
YP_003680348.1	COGs: COG2226 methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: 2-heptaprenyl-1,4-naphthoquinone methyltransferase, PFAM: methyltransferase type 11; SPTR: C1YMA9 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain
YP_003680349.1	COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: cyn:Cyan7425_5204 hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; SPTR: C1YMA8 6-pyruvoyl-tetrahydropterin synthase; PFAM: 6-pyruvoyl tetrahydropterin synthase
YP_003680350.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR004638:IPR001411:IPR016196; KEGG: cmi:CMM_0188  multi-drug efflux MFS permease; PFAM: major facilitator superfamily MFS_1; SPTR: C1YMA7 Drug resistance transporter EmrB/QacA subfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily
YP_003680351.1	KEGG: rop:ROP_53600 hypothetical membrane protein; SPTR: C1YMA6  uncharacterized protein
YP_003680352.1	COGs: COG0371 glycerol dehydrogenase; InterPro IPR016205:IPR018211:IPR001670; KEGG: tfu:Tfu_2801 glycerol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; SPTR: C1YMA5 glycerol dehydrogenase-like oxidoreductase; PFAM: Iron-containing alcohol dehydrogenase
YP_003680353.1	COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR007865:IPR000994:IPR001131; KEGG: tfu:Tfu_1744 Xaa-Pro aminopeptidase; PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; SPTR: C1YMA4 Xaa-Pro aminopeptidase; PFAM: aminopeptidase P, N-terminal domain; metallopeptidase family M24
YP_003680354.1	InterPro IPR000182:IPR016181; KEGG: aau:AAur_3737 GNAT family acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YMA3 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003680355.1	KEGG: tfu:Tfu_1745 hypothetical protein; SPTR: C1YMA2  uncharacterized protein; PFAM: protein of unknown function (DUF3099)
YP_003680356.1	COGs: COG3662 conserved hypothetical protein; InterPro IPR018713; KEGG: tcu:Tcur_1198 hypothetical protein; PFAM: protein of unknown function DUF2236; SPTR: C1YMA1 Uncharacterized conserved protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2236)
YP_003680357.1	InterPro IPR011051; KEGG: nfa:nfa32740 hypothetical protein; SPTR: C1YMA0  uncharacterized protein; PFAM: protein of unknown function (DUF861)
YP_003680358.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792:IPR001789:IPR011006:IPR011991; KEGG: tcu:Tcur_4661 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; SPTR: C1YM99 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003680359.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: tcu:Tcur_4660 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; SPTR: C1YM98 histidine kinase; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003680360.1	COGs: COG0015 adenylosuccinate lyase; InterProIPR020557:IPR000362:IPR008948:IPR004769:IPR 019468; KEGG: sro:Sros_4439 adenylosuccinate lyase ; K01756 adenylosuccinate lyase; PFAM: fumarate lyase; adenylosuccinate lyase-like; SPTR: C1YM97 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Lyase; adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase
YP_003680361.1	KEGG: rha:RHA1_ro08728 sensor histidine kinase KdpD; SPTR: C1YM96  uncharacterized protein
YP_003680362.1	COGs: COG1171 threonine dehydratase; InterPro IPR000634:IPR001926; KEGG: saq:Sare_4527 pyridoxal-5'-phosphate-dependent protein subunit beta; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: C1YM95 threonine dehydratase; PFAM: pyridoxal-phosphate dependent enzyme
YP_003680363.1	COGs: COG0614 ABC-type Fe3+-hydroxamate transporter periplasmic component; InterPro IPR002491; KEGG: sro:Sros_5058 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: C1YM94 ABC-type Fe3+-hydroxamate transporter periplasmic component; PFAM: Periplasmic binding protein
YP_003680364.1	COGs: COG0609 ABC-type Fe3+-siderophore transporter permease; InterPro IPR000522; KEGG: rxy:Rxyl_0414 transporter permease; PFAM: transporter permease; SPTR: C1YM93 ABC-type Fe3+-siderophore transporter permease; PFAM: FecCD transport family
YP_003680365.1	COGs: COG4779 ABC-type enterobactin transporter permease; InterPro IPR000522; KEGG: ami:Amir_0332 transporter permease; PFAM: transporter permease; SPTR: C1YM92 ABC-type enterobactin transporter permease; PFAM: FecCD transport family
YP_003680366.1	InterPro IPR016196:IPR011701; KEGG: ami:Amir_4777 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: C1YM91 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003680367.1	KEGG: ami:Amir_4778 methyltransferase small; SPTR: C1YM90  uncharacterized protein; PFAM: methyltransferase small domain
YP_003680368.1	KEGG: ami:Amir_4779 hypothetical protein; SPTR: C1YM89  uncharacterized protein; PFAM: Domain of unknown function (DUF364)
YP_003680369.1	COGs: COG0031 Cysteine synthase; InterPro IPR001926; KEGG: ami:Amir_4781 pyridoxal-5'-phosphate-dependent protein subunit beta; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; SPTR: C1YM88 Cysteine synthase; PFAM: pyridoxal-phosphate dependent enzyme
YP_003680370.1	COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR009002:IPR002563:IPR012349; KEGG: rop:ROP_16720 hypothetical protein; PFAM: flavin reductase domain protein FMN-binding; SPTR: C1YM87 Conserved protein of DIM6/NTAB family, COG1853; PFAM: Flavin reductase like domain
YP_003680371.1	InterPro IPR017517; KEGG: cai:Caci_4767 hypothetical protein; SPTR: C1YM86 Uncharacterized conserved protein; PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: uncharacterized Actinobacterial protein TIGR03083
YP_003680372.1	COGs: COG3397 conserved hypothetical protein; InterPro IPR001919:IPR008965:IPR004302:IPR012291; KEGG: sro:Sros_7565 hypothetical protein; PFAM: chitin-binding domain 3 protein; cellulose-binding family II; SMART: cellulose-binding family II; SPTR: C1YM85 Uncharacterized conserved protein; PFAM: cellulose binding domain; Chitin binding domain
YP_003680373.1	COGs: COG3693 beta-1 4-xylanase; InterProIPR001000:IPR012291:IPR001919:IPR013781:IPR 017909:IPR008965:IPR017853; KEGG: tfu:Tfu_2923 xylanase; PFAM: glycoside hydrolase family 10; cellulose-binding family II; SMART: glycoside hydrolase family 10; cellulose-binding family II; SPTR: C1YM84 endo-1,4-beta-xylanase (glycosyl hydrolase family 10); PFAM: cellulose binding domain; glycosyl hydrolase family 10
YP_003680374.1	InterProIPR001919:IPR000556:IPR008928:IPR008965:IPR 012291:IPR012341; KEGG: tfu:Tfu_1959 cellulose 1,4-beta-cellobiosidase; PFAM: glycoside hydrolase family 48; cellulose-binding family II; SMART: cellulose-binding family II; SPTR: C1YM83 cellulose 1,4-beta-cellobiosidase; PFAM: cellulose binding domain; glycosyl hydrolase family 48
YP_003680375.1	COGs: COG5297 cellobiohydrolase A (1 4-beta-cellobiosidase A); InterProIPR001524:IPR001919:IPR017909:IPR016288:IPR 008965:IPR012291; KEGG: sco:SCO6548 secreted cellulase; PFAM: 1, 4-beta cellobiohydrolase; cellulose-binding family II; SMART: cellulose-binding family II; SPTR: C1YM82 cellobiohydrolase A (1,4-beta-cellobiosidase A); PFAM: cellulose binding domain; glycosyl hydrolases family 6
YP_003680376.1	COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: tfu:Tfu_1931 hypothetical protein; PFAM: NADPH-dependent FMN reductase; SPTR: C1YM81 Predicted flavoprotein; PFAM: NADPH-dependent FMN reductase; TIGRFAM: FMN reductase, MsuE subfamily
YP_003680377.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: ami:Amir_5128 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YM80  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003680378.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: ami:Amir_5127 transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: C1YM79 LysR family transcriptional regulator; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_003680379.1	COGs: COG1995 pyridoxal phosphate biosynthesis protein; InterPro IPR005255; KEGG: sen:SACE_3460 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: pyridoxal phosphate biosynthetic protein PdxA; PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase; SPTR: C1YM78 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase
YP_003680380.1	COGs: COG3395 conserved hypothetical protein; InterPro IPR010737; KEGG: tfu:Tfu_2336 hypothetical protein; PFAM: type III effector Hrp-dependent outers; SPTR: C1YM77 Uncharacterized conserved protein; PFAM: protein of unknown function, DUF1537
YP_003680381.1	COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: cpo:COPRO5265_0182 Gnt-II system L-idonate transporter (L-Ido transporter); PFAM: gluconate transporter; SPTR: C1YM76 H+/gluconate symporter family protein; PFAM: GntP family permease; TIGRFAM: gluconate transporter
YP_003680382.1	COGs: COG1349 transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR014036; KEGG: sen:SACE_3462 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: C1YM75 transcriptional regulator of sugar metabolism; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_003680383.1	COGs: COG2376 dihydroxyacetone kinase; InterPro IPR004006; KEGG: sen:SACE_5291 dihydroxyacetone kinase N-terminal domain-containing protein; PFAM: Dak kinase; PRIAM: glycerone kinase; SPTR: C1YM74 dihydroxyacetone kinase; PFAM: Dak1 domain
YP_003680384.1	COGs: COG2376 dihydroxyacetone kinase; InterPro IPR004007; KEGG: sen:SACE_5290 dihydroxyacetone kinase C-terminal domain-containing protein; PFAM: Dak phosphatase; SPTR: C1YM73 dihydroxyacetone kinase; PFAM: DAK2 domain
YP_003680385.1	COGs: COG3507 beta-xylosidase; InterPro IPR006710; KEGG: cai:Caci_3599 glycoside hydrolase family 43; PFAM: glycoside hydrolase family 43; PRIAM: xylan 1,4-beta-xylosidase; SPTR: C1YM72 beta-xylosidase; PFAM: glycosyl hydrolases family 43
YP_003680386.1	InterPro IPR002711:IPR003615; KEGG: fal:FRAAL4530 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: C1YFK8 HNH endonuclease; PFAM: HNH endonuclease; Domain of unknown function DUF222
YP_003680387.1	COGs: COG1359 conserved hypothetical protein; InterPro IPR007138:IPR011008; KEGG: aau:AAur_0615 antibiotic biosynthesis monooxygenase domain-containing protein; PFAM: antibiotic biosynthesis monooxygenase; SPTR: C1YM70 Uncharacterized conserved protein; PFAM: antibiotic biosynthesis monooxygenase
YP_003680388.1	KEGG: xce:Xcel_3165 hypothetical protein; SPTR: C1YM69  uncharacterized protein; PFAM: Domain of unknown function (DUF3335)
YP_003680389.1	COGs: COG0609 ABC-type Fe3+-siderophore transporter permease; InterPro IPR000522; KEGG: xce:Xcel_3054 transporter permease; PFAM: transporter permease; SPTR: C1YM68 ABC-type Fe3+-siderophore transporter permease; PFAM: FecCD transport family
YP_003680390.1	COGs: COG0614 ABC-type Fe3+-hydroxamate transporter periplasmic component; InterPro IPR002491; KEGG: xce:Xcel_3055 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: C1YM67 ABC-type Fe3+-hydroxamate transporter periplasmic component; PFAM: Periplasmic binding protein
YP_003680391.1	COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; InterPro IPR017871:IPR003439:IPR003593; KEGG: xce:Xcel_3056 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YM66 ABC-type cobalamin/Fe3+-siderophore transporter ATPase component; PFAM: ABC transporter
YP_003680392.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR018062:IPR018060:IPR011051:IPR009057:IPR 013096:IPR000005; KEGG: rer:RER_03150 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; SPTR: C1YM65 DNA-binding domain-containing protein, AraC-type; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003680393.1	COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: pha:PSHAa1072 glycine betaine transporter; PFAM: BCCT transporter; SPTR: C1YM64 Choline-glycine betaine transporter; PFAM: BCCT family transporter
YP_003680394.1	COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048; KEGG: sen:SACE_3319 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: C1YM63 Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like monooxygenase
YP_003680395.1	KEGG: cef:CE2628  heat shock protein GrpE; SPTR: C1YM62  uncharacterized protein
YP_003680396.1	KEGG: sco:SCO3788 hypothetical protein; SPTR: C1YM61  uncharacterized protein
YP_003680397.1	COGs: COG0402 cytosine deaminase and related metal-dependent hydrolase; InterPro IPR011059:IPR006680; KEGG: nml:Namu_0048 amidohydrolase; PFAM: amidohydrolase; SPTR: C1YM60 cytosine deaminase-like metal-dependent hydrolase; PFAM: Amidohydrolase family
YP_003680398.1	COGs: COG1609 transcriptional regulators; InterPro IPR000843:IPR001761:IPR010982; KEGG: sen:SACE_4536 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: C1YM59 transcriptional regulator, LacI family; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003680399.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR001958:IPR016196; KEGG: sgr:SGR_5257 major facilitator superfamily permease; PFAM: major facilitator superfamily MFS_1; SPTR: C1YM58 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003680400.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR008271:IPR011009:IPR017442:IPR000719:IPR 017441; KEGG: tfu:Tfu_2375 tyrosine protein kinase:serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SPTR: C1YM57 protein kinase family protein; PFAM: protein kinase domain
YP_003680401.1	InterPro IPR008985; KEGG: sro:Sros_7437 hypothetical protein; SPTR: C1YM56  uncharacterized protein
YP_003680402.1	COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR003736:IPR011973:IPR006683; KEGG: sco:SCO7470 phenylacetic acid degradation protein PaaI; PFAM: thioesterase superfamily protein; SPTR: C1YM55 Phenylacetic acid degradation protein PaaD; TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily; TIGRFAM: uncharacterized domain 1; phenylacetic acid degradation protein PaaD
YP_003680403.1	COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterProIPR006058:IPR001041:IPR017927:IPR001221:IPR 001709:IPR017938:IPR011884:IPR008333:IPR001433:IPR012675; KEGG: sen:SACE_3548  phenylacetic acid degradation NADH oxidoreductase; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; SPTR: C1YM54 Phenylacetate-CoA oxygenase/reductase, PaaK subunit; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: 2Fe-2S iron-sulfur cluster binding domain; oxidoreductase FAD-binding domain; oxidoreductase NAD-binding domain; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit
YP_003680404.1	COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR011883:IPR002744; KEGG: sco:SCO7474 phenylacetic acid degradation protein PaaD; PFAM: protein of unknown function DUF59; SPTR: C1YM53 Phenylacetate-CoA oxygenase, PaaJ subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: Domain of unknown function DUF59; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit
YP_003680405.1	COGs: COG3396 conserved hypothetical protein; InterPro IPR011882:IPR009078:IPR007814:IPR012347; KEGG: sen:SACE_3546  phenylacetic acid degradation protein; PFAM: phenylacetic acid catabolic family protein; SPTR: C1YM52 Phenylacetate-CoA oxygenase, PaaI subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: Phenylacetic acid catabolic protein; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit
YP_003680406.1	COGs: COG3460 Uncharacterized protein of phenylacetate metabolism; InterPro IPR009359; KEGG: sen:SACE_3545 phenylacetate-CoA oxygenase subunit PaaB; PFAM: phenylacetic acid degradation B; SPTR: C1YM51 Phenylacetate-CoA oxygenase, PaaH subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: Phenylacetic acid degradation B; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit
YP_003680407.1	COGs: COG3396 conserved hypothetical protein; InterPro IPR009078:IPR011881:IPR007814:IPR012347; KEGG: ami:Amir_6692 phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein; SPTR: C1YM50 Phenylacetate-CoA oxygenase, PaaG subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: Phenylacetic acid catabolic protein; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit
YP_003680408.1	COGs: COG1024 enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: rer:RER_55510 enoyl-CoA hydratase PaaB; PFAM: enoyl-CoA hydratase/isomerase; SPTR: C1YM49 enoyl-CoA hydratase; PFAM: enoyl-CoA hydratase/isomerase family
YP_003680409.1	COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR016040:IPR008927:IPR006176:IPR006108:IPR 013328; KEGG: nfa:nfa21590  3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; PRIAM: 3-hydroxybutyryl-CoA dehydrogenase; SPTR: C1YM48 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YP_003680410.1	COGs: COG1024 enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: rha:RHA1_ro02862 enoyl-CoA hydratase; PFAM: enoyl-CoA hydratase/isomerase; SPTR: C1YM47 Short chain enoyl-CoA hydratase; PFAM: enoyl-CoA hydratase/isomerase family
YP_003680411.1	COGs: COG0183 acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016039:IPR016038; KEGG: rha:RHA1_ro02863 beta-ketoadipyl CoA thiolase; PRIAM: 3-oxoadipyl-CoA thiolase; SPTR: C1YM46 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase, C-terminal domain; thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; beta-ketoadipyl CoA thiolase
YP_003680412.1	COGs: COG1541 Coenzyme F390 synthetase; InterPro IPR000873:IPR011880; KEGG: svi:Svir_26570 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; PRIAM: Phenylacetate--CoA ligase; SPTR: C1YM45 Phenylacetate-CoA ligase; TIGRFAM: phenylacetate-CoA ligase; PFAM: AMP-binding enzyme; TIGRFAM: phenylacetate-CoA ligase
YP_003680413.1	KEGG: GJ17786 gene product from transcript GJ17786-RA; SPTR: C1YM44  uncharacterized protein
YP_003680414.1	KEGG: sgr:SGR_5602 hypothetical protein; SPTR: C1YM43  uncharacterized protein
YP_003680415.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792:IPR001789:IPR011991:IPR011006; KEGG: sco:SCO6254 two-component system response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YM42 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003680416.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: sco:SCO6253 two-component sensor kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C1YM41 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003680417.1	KEGG: dfe:Dfer_0763 signal transduction histidine kinase, LytS; SPTR: C1YM40  uncharacterized protein
YP_003680418.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR003439:IPR003593; KEGG: gyc:GYMC61_1171 ABC transporter related protein; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YM39 ABC-type multidrug transporter ATPase component; PFAM: ABC transporter
YP_003680419.1	KEGG: bra:BRADO2250 hypothetical protein; SPTR: C1YM38  uncharacterized protein
YP_003680420.1	COGs: COG1437 adenylate cyclase class 2 (thermophilic); InterPro IPR008172; KEGG: fal:FRAAL2704  adenylate cyclase; PFAM: adenylate cyclase; SPTR: C1YM37 adenylate cyclase, class 2 (Thermophilic); PFAM: CYTH domain; TIGRFAM: adenylyl cyclase CyaB
YP_003680421.1	KEGG: hoh:Hoch_6779 RNP-1 like RNA-binding protein; SPTR: C1YM36  uncharacterized protein
YP_003680422.1	COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: lch:Lcho_1118 glucarate dehydratase; PFAM: mandelate racemase/muconate lactonizing protein; SPTR: C1YM33 D-glucarate dehydratase; PFAM: mandelate racemase / muconate lactonizing enzyme, C-terminal domain; mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: glucarate dehydratase
YP_003680423.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016161:IPR015590:IPR016162; KEGG: cak:Caul_3617 aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase; SPTR: C1YM32 NAD-dependent aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase family
YP_003680424.1	COGs: COG0329 dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR017655:IPR002220:IPR013785; KEGG: ach:Achl_0351 5-dehydro-4-deoxyglucarate dehydratase; PFAM: dihydrodipicolinate synthetase; SPTR: C1YM31 5-dehydro-4-deoxyglucarate dehydratase; TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase; PFAM: dihydrodipicolinate synthetase family; TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase
YP_003680425.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: ach:Achl_0352 transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: C1YM30 transcriptional regulator, COG0583; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_003680426.1	COGs: COG3181 conserved hypothetical protein; InterPro IPR005064; KEGG: ach:Achl_0353 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C1YM29 Uncharacterized conserved protein; PFAM: tripartite tricarboxylate transporter family receptor
YP_003680427.1	KEGG: msm:MSMEG_0123 hypothetical protein; SPTR: C1YM28  uncharacterized protein
YP_003680428.1	COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: ach:Achl_0355 protein of unknown function DUF112 transmembrane; PFAM: protein of unknown function DUF112 transmembrane; SPTR: C1YM27 Uncharacterized conserved protein; PFAM: tripartite tricarboxylate transporter TctA family
YP_003680429.1	KEGG: hypothetical protein
YP_003680430.1	InterPro IPR002711:IPR003615; KEGG: fal:FRAAL4530 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: C1YM26 HNH endonuclease; PFAM: HNH endonuclease; Domain of unknown function DUF222
YP_003680431.1	COGs: COG3958 transketolase C-terminal subunit; InterPro IPR009014:IPR005476:IPR005475:IPR015941; KEGG: ach:Achl_0406 transketolase central region; PFAM: transketolase; transketolase domain protein; SMART: transketolase; SPTR: C1YM25 transketolase subunit B; PFAM: transketolase, C-terminal domain; transketolase, pyrimidine binding domain
YP_003680432.1	COGs: COG3959 transketolase N-terminal subunit; InterPro IPR005474; KEGG: sen:SACE_4350 transketolase; PFAM: transketolase domain protein; SPTR: C1YM24 transketolase subunit A; PFAM: transketolase, thiamine diphosphate binding domain
YP_003680433.1	COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: art:Arth_0274 inner membrane permease YgbN; PFAM: gluconate transporter; SPTR: C1YM23 gluconate transporter; TIGRFAM: gluconate transporter; PFAM: GntP family permease; TIGRFAM: gluconate transporter
YP_003680434.1	COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR016040:IPR008927:IPR006115:IPR013328; KEGG: xau:Xaut_1538 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; PRIAM: 3-hydroxyisobutyrate dehydrogenase; SPTR: C1YM22 beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_003680435.1	COGs: COG2186 transcriptional regulators; InterPro IPR000524:IPR011711:IPR011991; KEGG: sen:SACE_3480 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C1YM21 transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003680436.1	InterPro IPR004680; KEGG: ami:Amir_3386 TRAP C4-dicarboxylate transporter permease DctM subunit; PFAM: citrate transporter; SPTR: C1YM20 citrate transporter; PFAM: citrate transporter
YP_003680437.1	KEGG: ami:Amir_3385 hypothetical protein; SPTR: C1YM19  uncharacterized protein
YP_003680438.1	COGs: COG0145 N-methylhydantoinase A/acetone carboxylase subunit beta; InterPro IPR008040:IPR002821; KEGG: ami:Amir_3384 hydantoinase/oxoprolinase; PFAM: hydantoinase/oxoprolinase; hydantoinaseoxoprolinase domain protein; SPTR: C1YM18 N-methylhydantoinase A/acetone carboxylase subunit beta; PFAM: hydantoinase/oxoprolinase; hydantoinase/oxoprolinase N-terminal region
YP_003680439.1	InterPro IPR016040:IPR003953; KEGG: sco:SCO0628 secreted protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: C1YM17 glucose inhibited division protein A; PFAM: FAD binding domain
YP_003680440.1	COGs: COG1609 transcriptional regulators; InterPro IPR000843:IPR010982; KEGG: sco:SCO0629 transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI; SPTR: C1YM16 LacI family transcriptional regulator; PFAM: Bacterial regulatory proteins, lacI family
YP_003680441.1	InterPro IPR017909:IPR006311; KEGG: sco:SCO0624 secreted protein; SPTR: C1YM15  uncharacterized protein
YP_003680442.1	InterPro IPR006764; KEGG: sma:SAV_1279 hypothetical protein; PFAM: protein of unknown function DUF574; SPTR: C1YM14  uncharacterized protein; PFAM: protein of unknown function (DUF574)
YP_003680443.1	InterPro IPR018775; KEGG: tfu:Tfu_1072 hypothetical protein; PFAM: nucleotidyltransferase, predicted; SPTR: C1YM13 Predicted nucleotidyltransferase; PFAM: Predicted nucleotidyltransferase
YP_003680444.1	SPTR: C1YM12  uncharacterized protein
YP_003680445.1	KEGG: mxa:MXAN_5281 hypothetical protein; SPTR: C1YM11  uncharacterized protein
YP_003680446.1	InterPro IPR001387; KEGG: sro:Sros_5666  XRE family transcriptional regulator; SMART: helix-turn-helix domain protein; SPTR: C1YM10  uncharacterized protein; PFAM: Helix-turn-helix
YP_003680447.1	COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198:IPR002347:IPR016040; KEGG: cak:Caul_2869 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YM09 Short-chain alcohol dehydrogenase; PFAM: short chain dehydrogenase
YP_003680448.1	KEGG: hypothetical protein; SPTR: C1YM08  uncharacterized protein
YP_003680449.1	KEGG: sen:SACE_5511 hypothetical protein; SPTR: C1YM07  uncharacterized protein
YP_003680450.1	KEGG: proteophosphoglycan 5; SPTR: C1YM06  uncharacterized protein (Fragment)
YP_003680451.1	KEGG: hypothetical protein; SPTR: C1YWL8  uncharacterized protein (Fragment)
YP_003680452.1	KEGG: ote:Oter_1689 cell wall surface anchor family protein; SPTR: C1YWF5  uncharacterized protein (Fragment)
YP_003680453.1	KEGG: sma:SAV_5435 hypothetical protein; SPTR: C1YWF4  uncharacterized protein
YP_003680454.1	KEGG: sro:Sros_1738 hypothetical protein; SPTR: C1YWF3  uncharacterized protein
YP_003680455.1	KEGG: tfu:Tfu_0070 hypothetical protein; SPTR: C1YWF2  uncharacterized protein
YP_003680456.1	KEGG: sgr:SGR_6548 hypothetical protein; SPTR: C1YWF1  uncharacterized protein
YP_003680457.1	SPTR: C1YWF0  uncharacterized protein
YP_003680458.1	InterPro IPR001647:IPR009057; KEGG: cbt:CLH_1054  transcriptional regulator, AcrR family; SPTR: C1YWE9  uncharacterized protein
YP_003680459.1	COGs: COG2723 beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; InterPro IPR001360:IPR013781:IPR017853:IPR017736; KEGG: tfu:Tfu_1629 beta-glucosidase; PFAM: glycoside hydrolase family 1; PRIAM: beta-glucosidase; SPTR: C1YWE8 Broad-specificity cellobiase; TIGRFAM: beta-galactosidase; PFAM: glycosyl hydrolase family 1; TIGRFAM: beta-galactosidase
YP_003680460.1	KEGG: sro:Sros_8945 hypothetical protein; SPTR: C1YWE7  uncharacterized protein
YP_003680461.1	KEGG: sgr:SGR_2252 hypothetical protein; SPTR: C1YTB3  uncharacterized protein
YP_003680462.1	InterPro IPR016461:IPR001077:IPR011991; KEGG: sen:SACE_4031 phenazine-specific methyltransferase; PFAM: O-methyltransferase family 2; SPTR: C1YTB2 O-methyltransferase; PFAM: O-methyltransferase
YP_003680463.1	COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR002523; KEGG: tfu:Tfu_1428 magnesium/cobalt transporter CorA; PFAM: Mg2 transporter protein CorA family protein; SPTR: C1YTB1 Mg2+/Co2+ transporter; PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transporter (corA)
YP_003680464.1	COGs: COG3145 Alkylated DNA repair protein; InterPro IPR005123; KEGG: tfu:Tfu_1427 DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase; SPTR: C1YTB0 DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase superfamily; TIGRFAM: DNA alkylation damage repair protein AlkB
YP_003680465.1	InterPro IPR006311; KEGG: tfu:Tfu_1426 hypothetical protein; SPTR: C1YTA9  uncharacterized protein
YP_003680466.1	KEGG: tcu:Tcur_0082 hypothetical protein; SPTR: C1YTA8  uncharacterized protein
YP_003680467.1	InterPro IPR011991; KEGG: tcu:Tcur_0081 MarR family transcriptional regulator protein; SPTR: C1YTA7 transcriptional regulator
YP_003680468.1	COGs: COG5006 permease DMT superfamily protein; InterPro IPR000620; KEGG: tfu:Tfu_1425  integral membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C1YTA5 Predicted permease, DMT superfamily; PFAM: EamA-like transporter family
YP_003680469.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: tfu:Tfu_1423 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: C1YTA4 transcriptional regulator, COG0583; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_003680470.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: tfu:Tfu_1422 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: C1YTA3 transcriptional regulator, COG0583; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_003680471.1	InterPro IPR000182:IPR016181; KEGG: tfu:Tfu_1420 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YTA2 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003680472.1	KEGG: tfu:Tfu_1419 hypothetical protein; SPTR: C1YTA1  uncharacterized protein
YP_003680473.1	COGs: COG1289 membrane protein; InterPro IPR010289; KEGG: bsu:BSU33550  integral inner membrane protein; PFAM: protein of unknown function DUF893 YccS/YhfK; SPTR: C1YTA0 Predicted membrane protein, COG1289
YP_003680474.1	COGs: COG1878 metal-dependent hydrolase; InterPro IPR007325; KEGG: tfu:Tfu_1418 hypothetical protein; PFAM: cyclase family protein; SPTR: C1YT99 Predicted metal-dependent hydrolase, COG1878; PFAM:  cyclase
YP_003680475.1	COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: tfu:Tfu_1417 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: C1YT98 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_003680476.1	COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR000759:IPR013027; KEGG: sen:SACE_2001 ferredoxin--NADP(+) reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: C1YT97 NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003680477.1	COGs: COG0768 cell division protein FtsI/penicillin-binding protein 2; InterPro IPR012338:IPR005311:IPR007887:IPR001460; KEGG: tfu:Tfu_1416  secreted penicillin binding protein; PFAM: penicillin-binding protein transpeptidase; NTF2 domain protein transpeptidase; SPTR: C1YT96 cell division protein FtsI/penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; NTF2-like N-terminal transpeptidase domain; Penicillin-binding protein dimerisation domain
YP_003680478.1	KEGG: GF20827 gene product from transcript GF20827-RA; SPTR: C1YT95  uncharacterized protein
YP_003680479.1	KEGG: GG22085 gene product from transcript GG22085-RA; SPTR: C1YT94  uncharacterized protein
YP_003680480.1	COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR002198:IPR014044; KEGG: tcu:Tcur_4285 SCP-like extracellular; PFAM: SCP-like extracellular; SPTR: C1YT93 SCP-like extracellular protein; PFAM: Cysteine-rich secretory protein family
YP_003680481.1	KEGG: tfu:Tfu_1415 hypothetical protein; SPTR: C1YT92  uncharacterized protein; PFAM: protein of unknown function (DUF3040)
YP_003680482.1	COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterProIPR008995:IPR003439:IPR017871:IPR003593:IPR 005116; KEGG: tfu:Tfu_0326 ABC-type spermidine/putrescine transporters ATPase components; PFAM: ABC transporter; TOBE domain protein; SMART: ATPase AAA; SPTR: C1YT91 ABC-type spermidine/putrescine transporter ATPase component; PFAM: ABC transporter; TOBE domain
YP_003680483.1	COGs: COG4149 ABC-type molybdate transporter permease; InterPro IPR011867:IPR006469:IPR000515; KEGG: tcu:Tcur_2821 molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YT90 NifC-like ABC-type porter/molybdate ABC transporter permease protein; TIGRFAM: molybdate ABC transporter inner membrane subunit; NifC-like ABC-type porter; PFAM: Binding-protein-dependent transporter inner membrane component; TIGRFAM: molybdate ABC transporter permease; NifC-like ABC-type porter
YP_003680484.1	COGs: COG0725 ABC-type molybdate transporter periplasmic component; InterPro IPR005950:IPR006059; KEGG: tfu:Tfu_0328 molybdenum ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: C1YT89 Molybdenum ABC transporter periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein
YP_003680485.1	InterProIPR008995:IPR005116:IPR000551:IPR009061:IPR 010093; KEGG: tcu:Tcur_2823 DNA binding domain protein, excisionase family; PFAM: TOBE domain protein; regulatory protein MerR; SPTR: C1YT88 DNA-binding protein, excisionase family; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: MerR family regulatory protein; TOBE domain; TIGRFAM: molybdenum-pterin binding domain; DNA binding domain, excisionase family
YP_003680486.1	COGs: COG1649 conserved hypothetical protein; InterPro IPR017853:IPR003790; KEGG: tfu:Tfu_1414 FenI protein; PFAM: protein of unknown function DUF187; SPTR: C1YT87 Uncharacterized conserved protein; PFAM: Uncharacterised BCR, COG1649
YP_003680487.1	COGs: COG1169 Isochorismate synthase; InterPro IPR005801:IPR004561:IPR015890; KEGG: tfu:Tfu_1413 isochorismate synthase; PFAM: chorismate binding-like; SPTR: C1YT86 Isochorismate synthase family protein; TIGRFAM: isochorismate synthase; PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases
YP_003680488.1	InterPro IPR000182:IPR016181; KEGG: sen:SACE_5148 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YT85 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003680489.1	COGs: COG3211 phosphatase; InterPro IPR017909:IPR006311:IPR008557; KEGG: tfu:Tfu_2294 phosphatase; PFAM: protein of unknown function DUF839; SPTR: C1YT84 Predicted phosphatase; PFAM: Bacterial protein of unknown function (DUF839); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003680490.1	COGs: COG1165 2-succinyl-6-hydroxy-2 4-cyclohexadiene-1-carboxylate synthase; InterPro IPR004433:IPR012001; KEGG: tfu:Tfu_1411 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; SPTR: C1YT83 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase; TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; PFAM: thiamine pyrophosphate enzyme, N-terminal TPP binding domain; TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase
YP_003680491.1	COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR018110:IPR013342; KEGG: tfu:Tfu_1410 O-succinylbenzoate synthase; PFAM: mandelate racemase/muconate lactonizing protein; SPTR: C1YT82 Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase; PFAM: mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase
YP_003680492.1	COGs: COG0447 dihydroxynaphthoic acid synthase; InterPro IPR018376:IPR010198:IPR001753; KEGG: tfu:Tfu_1409 naphthoate synthase; PFAM: enoyl-CoA hydratase/isomerase; SPTR: C1YT81 1,4-dihydroxy-2-naphthoate synthase; TIGRFAM: naphthoate synthase; PFAM: enoyl-CoA hydratase/isomerase family; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase)
YP_003680493.1	COGs: COG0318 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: tfu:Tfu_1408  ortho-succinylbenzoate-CoA synthetase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YT80 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme
YP_003680494.1	COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR007624:IPR000943:IPR014284:IPR007627:IPR 007630:IPR011991:IPR013324:IPR013325:IPR009042; KEGG: tfu:Tfu_1407 RNA polymerase sigma factor; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; SPTR: C1YT79 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003680495.1	KEGG: sco:SCO3076 integral membrane protein; SPTR: C1YT78  uncharacterized protein
YP_003680496.1	COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; KEGG: sgr:SGR_2540  metal ion transporter; SPTR: C1YT77 Mn2+/Fe2_transporter NRAMP family; PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters
YP_003680497.1	COGs: COG1725 transcriptional regulator protein; InterPro IPR000524:IPR011991; KEGG: tfu:Tfu_1406 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C1YT76 GntR family transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family
YP_003680498.1	KEGG: tfu:Tfu_1405 hypothetical protein; SPTR: C1YT75  uncharacterized protein
YP_003680499.1	InterProIPR003012:IPR011075:IPR009057:IPR001647:IPR 012287:IPR015893; KEGG: tfu:Tfu_1404 hypothetical protein; PFAM: regulatory protein TetR; SPTR: C1YT74 transcriptional regulator, tetR family; PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family
YP_003680500.1	COGs: COG4326 sporulation control protein; InterPro IPR009776; KEGG: sco:SCO1793 secreted protein; PFAM: SpoOM family protein; SPTR: C1YT73 sporulation control protein; PFAM: SpoOM protein
YP_003680501.1	COGs: COG1123 ATPase components of various ABC-type transporters contain duplicated ATPase; InterPro IPR017871:IPR003439:IPR013563:IPR003593; KEGG: tfu:Tfu_1819 ATPase components of various ABC-type transporters contain duplicated ATPase; PFAM: ABC transporter related; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; SPTR: C1YT72 ATPase component of various ABC-type transporters with duplicated ATPase domain; PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK
YP_003680502.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: tfu:Tfu_1820  peptide transporter permease; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YT71 ABC-type dipeptide/oligopeptide/nickel transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003680503.1	InterPro IPR007278; KEGG: tfu:Tfu_1802 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YK80  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003680504.1	InterPro IPR007278; KEGG: tfu:Tfu_1802 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YT70  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003680505.1	InterPro IPR001387:IPR010982; KEGG: svi:Svir_24740 helix-turn-helix protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YT69  uncharacterized protein; PFAM: Helix-turn-helix
YP_003680506.1	COGs: COG3920 Signal transduction histidine kinase; InterPro IPR003594; KEGG: tcu:Tcur_1945  anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: C1YT68 histidine kinase; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003680507.1	InterPro IPR009061; KEGG: gbr:Gbro_1042 DNA binding domain protein, excisionase family; SPTR: C1YT67  uncharacterized protein
YP_003680508.1	COGs: COG5012 cobalamin binding protein; InterPro IPR006158; KEGG: sro:Sros_4482 cobalamin binding protein-like protein; PFAM: cobalamin B12-binding domain protein; SPTR: C1YT66 Predicted cobalamin binding protein; PFAM: B12 binding domain
YP_003680509.1	COGs: COG2208 serine phosphatase RsbU regulator of sigma subunit; InterPro IPR010822:IPR001932; KEGG: ami:Amir_5090 protein serine/threonine phosphatase; PFAM: stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; SPTR: C1YT65 stage II sporulation protein E (SpoIIE); PFAM: stage II sporulation protein E (SpoIIE)
YP_003680510.1	COGs: COG0747 ABC-type dipeptide transporter periplasmic component; InterPro IPR000914; KEGG: tfu:Tfu_1821  peptide transporter substrate-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: C1YT64 ABC-type dipeptide transporter periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_003680511.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: tfu:Tfu_1822 oligopeptide transport integral membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YT63 ABC-type dipeptide/oligopeptide/nickel transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003680512.1	COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR017871:IPR003593:IPR003439; KEGG: stp:Strop_0750 ABC transporter; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YT62 ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter
YP_003680513.1	COGs: COG0166 glucose-6-phosphate isomerase; InterPro IPR018189:IPR001672; KEGG: sma:SAV_6302 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); PRIAM: glucose-6-phosphate isomerase; SPTR: C1YT61 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase
YP_003680514.1	InterPro IPR005821; KEGG: sen:SACE_2911 voltage-gated sodium channel; PFAM: ion transporter; SPTR: C1YT60 ion transport protein; PFAM: ion transporter
YP_003680515.1	KEGG: bpm:BURPS1710b_3142 hypothetical protein; SPTR: C1YT59  uncharacterized protein
YP_003680516.1	COGs: COG2186 transcriptional regulators; InterPro IPR010916:IPR000524:IPR011711:IPR011991; KEGG: sma:SAV_7278 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C1YT58 transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003680517.1	COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017; KEGG: sco:SCO0815 hypothetical protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: C1YT57 Fe-S oxidoreductase; PFAM: Cysteine-rich domain
YP_003680518.1	COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain; InterPro IPR012285:IPR003741:IPR009051; KEGG: sma:SAV_7411 iron-sulfur protein; PFAM: protein of unknown function DUF162; SPTR: C1YT56 Uncharacterized conserved protein containing a ferredoxin-like domain; PFAM: Uncharacterised ACR, YkgG family COG1556; TIGRFAM: 2[4Fe-4S] protein
YP_003680519.1	COGs: COG1556 conserved hypothetical protein; InterPro IPR003741; KEGG: sco:SCO0817 hypothetical protein; PFAM: protein of unknown function DUF162; SPTR: C1YT55 Uncharacterized conserved protein; PFAM: Uncharacterised ACR, YkgG family COG1556
YP_003680520.1	InterPro IPR005065; KEGG: sro:Sros_8803 hypothetical protein; PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; SPTR: C1YT54 Platelet-activating factor acetylhydrolase, plasma/intracellular isoform II; PFAM: isoform II
YP_003680521.1	COGs: COG2124 cytochrome P450; InterPro IPR002397:IPR001128; KEGG: tfu:Tfu_1747  cytochrome P450; SPTR: C1YT53 cytochrome P450
YP_003680522.1	KEGG: fal:FRAAL3309 hypothetical protein; SPTR: C1YT52  uncharacterized protein; PFAM: protein of unknown function (DUF2786)
YP_003680523.1	KEGG: hoh:Hoch_1600 hypothetical protein; SPTR: C1YT51  uncharacterized protein; PFAM: RNA ligase
YP_003680524.1	COGs: COG4639 kinase; InterPro IPR003607; KEGG: hoh:Hoch_1599 polyA polymerase related protein; SPTR: C1YT50 Predicted kinase, COG4639; PFAM: HD domain
YP_003680525.1	KEGG: sro:Sros_2823 hypothetical protein; SPTR: C1YT49  uncharacterized protein
YP_003680526.1	InterPro IPR000182:IPR016181; KEGG: tfu:Tfu_1365  acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YT48 acetyltransferase, N-acetylglutamate synthase; PFAM: acetyltransferase (GNAT) family
YP_003680527.1	KEGG: tcu:Tcur_1918 hypothetical protein; SPTR: C1YT47  uncharacterized protein
YP_003680528.1	COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: sro:Sros_0566 formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: C1YT46 Predicted acyl-CoA transferase/carnitine dehydratase; PFAM: CoA-transferase family III
YP_003680529.1	COGs: COG0777 acetyl-CoA carboxylase beta subunit; InterPro IPR011762:IPR011763:IPR000438:IPR000022; KEGG: tcu:Tcur_1213 carboxyl transferase; PFAM: carboxyl transferase; SPTR: C1YT45 acetyl-CoA carboxylase subunit beta; PFAM: carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase subunit beta
YP_003680530.1	COGs: COG2186 transcriptional regulators; InterPro IPR000524:IPR011711:IPR011991; KEGG: rop:ROP_26620  GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C1YT44 transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003680531.1	InterPro IPR009827; KEGG: msm:MSMEG_2172 dicarboxylate-carrier protein; PFAM: Dicarboxylate carrier MatC domain protein; SPTR: C1YT43 citrate transporter; PFAM: Dicarboxylate carrier protein MatC N-terminus; citrate transporter
YP_003680532.1	COGs: COG0406 fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: cai:Caci_1570 phosphoglycerate mutase; PFAM: phosphoglycerate mutase; SMART: phosphoglycerate mutase; SPTR: C1YT42 fructose-2,6-bisphosphatase; PFAM: phosphoglycerate mutase family
YP_003680533.1	KEGG: sgr:SGR_2518 hypothetical protein; SPTR: C1YT41  uncharacterized protein
YP_003680534.1	InterPro IPR009045:IPR003709; KEGG: msm:MSMEG_1900 D-alanyl-D-alanine carboxypeptidase family protein; PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; SPTR: C1YT40 D-alanyl-D-alanine carboxypeptidase; PFAM: D-alanyl-D-alanine carboxypeptidase
YP_003680535.1	COGs: COG1196 chromosome segregation ATPase; InterPro IPR013496; KEGG: cai:Caci_5500 hypothetical protein; SPTR: C1YT39  uncharacterized protein (Fragment); TIGRFAM: conserved hypothetical protein TIGR02680
YP_003680536.1	InterPro IPR013494; KEGG: cai:Caci_5501 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C1YVL6  uncharacterized protein; PFAM: protein of unknown function (DUF2398); TIGRFAM: conserved hypothetical protein TIGR02678
YP_003680537.1	InterPro IPR013493; KEGG: cai:Caci_5502 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C1YVL5  uncharacterized protein; PFAM: protein of unknown function (DUF2397); TIGRFAM: conserved hypothetical protein TIGR02677
YP_003680538.1	COGs: COG0786 Na+/glutamate symporter; InterPro IPR004445; KEGG: cur:cur_1974  sodium/glutamate symporter; PFAM: sodium/glutamate symporter; SPTR: C1YVL4 Na+/glutamate symporter; TIGRFAM: sodium--glutamate symport carrier (gltS)
YP_003680539.1	InterPro IPR011637; KEGG: sen:SACE_3050 hypothetical protein; PFAM: DoxX family protein; SPTR: C1YVL3 DoxX protein; PFAM: DoxX
YP_003680540.1	COGs: COG1409 phosphohydrolase; InterPro IPR004843; KEGG: sgr:SGR_666  phosphoesterase; PFAM: metallophosphoesterase; SPTR: C1YVL2 Predicted phosphohydrolase; PFAM: Calcineurin-like phosphoesterase
YP_003680541.1	COGs: COG1443 Isopentenyldiphosphate isomerase; InterPro IPR011876:IPR015797:IPR000086; KEGG: sco:SCO6750 isopentenyl-diphosphate delta-isomerase; PFAM: NUDIX hydrolase; PRIAM: Isopentenyl-diphosphate delta-isomerase; SPTR: C1YVL1 Isopentenyl-diphosphate delta-isomerase; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; PFAM: NUDIX domain; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1
YP_003680542.1	COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR013216; KEGG: cai:Caci_4613 methyltransferase type 11; PFAM: methyltransferase type 11; SPTR: C1YVL0 methyltransferase family protein; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_003680543.1	InterPro IPR008949; KEGG: cai:Caci_4612 terpene synthase, metal-binding; SPTR: C1YVK9  uncharacterized protein; PFAM: Terpene synthase family, metal binding domain
YP_003680544.1	COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR018490:IPR000595:IPR018488:IPR014710; KEGG: sgr:SGR_1270  nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; SPTR: C1YVK8 Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain
YP_003680545.1	InterPro IPR004684; KEGG: bpt:Bpet1985 2-keto-3-deoxygluconate permease; PFAM: 2-keto-3-deoxygluconate permease; SPTR: C1YVK7 2-keto-3-deoxygluconate permease; PFAM: 2-keto-3-deoxygluconate permease; TIGRFAM: 2-keto-3-deoxygluconate transporter
YP_003680546.1	COGs: COG3395 conserved hypothetical protein; InterPro IPR010737; KEGG: bpt:Bpet1986 hypothetical protein; PFAM: type III effector Hrp-dependent outers; SPTR: C1YVK6 Uncharacterized conserved protein; PFAM: protein of unknown function, DUF1537
YP_003680547.1	COGs: COG1995 pyridoxal phosphate biosynthesis protein; InterPro IPR005255; KEGG: bbr:BB3214  pyridoxal phosphate biosynthetic protein; PFAM: pyridoxal phosphate biosynthetic protein PdxA; PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase; SPTR: C1YVK4 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase
YP_003680548.1	COGs: COG2188 transcriptional regulators; InterPro IPR011663:IPR000524:IPR011991; KEGG: bpt:Bpet1988 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SPTR: C1YVK5 transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_003680549.1	InterPro IPR006540; KEGG: tfu:Tfu_0814 bacteriocin, lactococcin 972; PFAM: bacteriocin lactococcin 972; SPTR: C1YVK3 Bacteriocin, lactococcin 972 family; TIGRFAM: bacteriocin, lactococcin 972 family; PFAM: Bacteriocin (Lactococcin_972); TIGRFAM: bacteriocin, lactococcin 972 family
YP_003680550.1	COGs: COG4652 conserved hypothetical protein; KEGG: tfu:Tfu_0813 hypothetical protein; SPTR: C1YVK2  uncharacterized protein
YP_003680551.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: tfu:Tfu_0812 peptide ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YVK1 ABC-type antimicrobial peptide transporter ATPase component; PFAM: ABC transporter
YP_003680552.1	KEGG: sro:Sros_3883 hypothetical protein; SPTR: C1YVK0  uncharacterized protein
YP_003680553.1	COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR006597:IPR011717:IPR019734:IPR011990; KEGG: tfu:Tfu_1658 Sel1-like repeat-containing serine/threonine protein kinase; PFAM: Sel1 domain protein repeat-containing protein; hypothetical protein; SPTR: C1YVJ9 TPR repeat-containing protein; PFAM: Sel1 repeat; Tetratricopeptide repeat
YP_003680554.1	KEGG: cte:CT0447 hypothetical protein; SPTR: C1YVJ8  uncharacterized protein
YP_003680555.1	KEGG: hypothetical protein; SPTR: C1YVJ7  uncharacterized protein
YP_003680556.1	KEGG: dau:Daud_1241 hypothetical protein; SPTR: C1YVJ6  uncharacterized protein
YP_003680557.1	KEGG: hypothetical protein; SPTR: C1YVJ5  uncharacterized protein
YP_003680558.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: ami:Amir_2395 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YVJ4  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003680559.1	KEGG: eca:ECA2073 oxidoreductase; SPTR: C1YVJ3  uncharacterized protein
YP_003680560.1	KEGG: tfu:Tfu_1735  regulator; SPTR: C1YVJ2  uncharacterized protein
YP_003680561.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterProIPR016040:IPR013149:IPR011032:IPR002364:IPR 013154; KEGG: ami:Amir_2444 alcohol dehydrogenase GroES domain protein; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; SPTR: C1YVJ1 Zn-dependent oxidoreductase, NADPH:quinone reductase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003680562.1	InterPro IPR020568:IPR014721; KEGG: sma:SAV_1799 elongation factor G; SPTR: C1YVJ0  uncharacterized protein; PFAM: Elongation factor G, domain IV
YP_003680563.1	InterPro IPR018958; KEGG: hch:HCH_05472 hypothetical protein; PFAM: cell wall assembly/cell proliferation coordinating protein, KNR4-like; SPTR: C1YKL2  glucan synthasis protein
YP_003680564.1	COGs: COG0628 permease; InterPro IPR002549; KEGG: tfu:Tfu_2165 hypothetical protein; PFAM: protein of unknown function UPF0118; SPTR: C1YKL1 Predicted permease; PFAM: Domain of unknown function DUF20
YP_003680565.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: sgr:SGR_6211  hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YKL0 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003680566.1	COGs: COG2208 serine phosphatase RsbU regulator of sigma subunit; InterProIPR010822:IPR000700:IPR000014:IPR001932:IPR 001610; KEGG: sgr:SGR_6212  regulatory protein; PFAM: stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: C1YKK9 PAS domain S-box; TIGRFAM: PAS sensor protein; PFAM: stage II sporulation protein E (SpoIIE); TIGRFAM: PAS domain S-box
YP_003680567.1	InterPro IPR002645:IPR003658; KEGG: sma:SAV_921 anti-sigma factor antagonist; PFAM: sulfate transporter/antisigma-factor antagonist STAS; SPTR: C1YKK8 anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_003680568.1	COGs: COG2513 PEP phosphonomutase; InterPro IPR015813; KEGG: sro:Sros_4484 PEP phosphonomutase; SPTR: C1YKK7 PEP phosphonomutase-like enzyme
YP_003680569.1	COGs: COG3342 conserved hypothetical protein; InterPro IPR010430; KEGG: ddr:Deide_3p02220 hypothetical protein; PFAM: protein of unknown function DUF1028; SPTR: C1YKK6 Uncharacterized conserved protein; PFAM: Family of unknown function (DUF1028)
YP_003680570.1	COGs: COG4715 conserved hypothetical protein; InterPro IPR007527; KEGG: sma:SAV_457 hypothetical protein; PFAM: zinc finger SWIM domain protein; SPTR: C1YKK5 Uncharacterized conserved protein; PFAM: SWIM zinc finger
YP_003680571.1	COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: sco:SCO2652 hypothetical protein; PFAM: protein of unknown function UPF0074; SPTR: C1YKK4 Rrf2 family/BadM/Rrf2 family transcriptional regulator/Rrf2 family; PFAM: transcriptional regulator; TIGRFAM: rrf2 family protein ( transcriptional regulator)
YP_003680572.1	KEGG: sma:SAV_707 hypothetical protein; SPTR: C1YKK3  uncharacterized protein
YP_003680573.1	InterPro IPR009959; KEGG: sen:SACE_5593 hypothetical protein; PFAM: protein of unknown function DUF1486; SPTR: C1YKK2 Ketosteroid isomerase-like protein; PFAM: SnoaL-like polyketide cyclase
YP_003680574.1	InterPro IPR008979:IPR018958:IPR000421; KEGG: sco:SCO7634 hypothetical protein; PFAM: cell wall assembly/cell proliferation coordinating protein, KNR4-like; coagulation factor 5/8 type domain protein; SMART: cell wall assembly/cell proliferation coordinating protein, KNR4-like; SPTR: C1YKK1  glucan synthasis protein
YP_003680575.1	InterPro IPR015797:IPR000086; KEGG: fal:FRAAL2015 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: C1YKK0 ADP-ribose pyrophosphatase; PFAM: NUDIX domain
YP_003680576.1	COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; InterPro IPR017871:IPR003593:IPR003439; KEGG: rop:ROP_30420  ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YKJ9 ABC-type cobalamin/Fe3+-siderophore transporter ATPase component; PFAM: ABC transporter
YP_003680577.1	COGs: COG0609 ABC-type Fe3+-siderophore transporter permease; InterPro IPR000522; KEGG: sgr:SGR_6641 iron ABC transporter; PFAM: transporter permease; SPTR: C1YKJ8 ABC-type Fe3+-siderophore transporter permease; PFAM: FecCD transport family
YP_003680578.1	InterPro IPR013217; KEGG: rer:RER_11930 methyltransferase; PFAM: methyltransferase type 12; SPTR: C1YKJ7 methyltransferase family protein; PFAM: methyltransferase domain
YP_003680579.1	COGs: COG0614 ABC-type Fe3+-hydroxamate transporter periplasmic component; InterPro IPR002491; KEGG: rop:ROP_45160  ABC transporter substrate-binding protein; PFAM: periplasmic binding protein; SPTR: C1YKJ6 ABC-type Fe3+-hydroxamate transporter periplasmic component; PFAM: Periplasmic binding protein
YP_003680580.1	InterPro IPR013216; KEGG: sgr:SGR_3078  methyltransferase; PFAM: methyltransferase type 11; SPTR: C1YKJ5 methyltransferase family protein; PFAM: methyltransferase domain
YP_003680581.1	COGs: COG1506 dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR007110:IPR011042:IPR011659:IPR001375; KEGG: sro:Sros_8147 hypothetical protein; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; hypothetical protein; SPTR: C1YKJ4 dipeptidyl aminopeptidase/acylaminoacyl peptidase; PFAM: prolyl oligopeptidase family
YP_003680582.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR009061; KEGG: stp:Strop_2419 regulatory protein, MerR; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YKJ3 Predicted transcriptional regulator; PFAM: MerR family regulatory protein
YP_003680583.1	COGs: COG3592 conserved hypothetical protein; InterPro IPR010693; KEGG: sgr:SGR_1561 hypothetical protein; PFAM: protein of unknown function DUF1271; SPTR: C1YKJ2 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF1271)
YP_003680584.1	InterPro IPR002734; KEGG: nfa:nfa14660 hypothetical protein; PFAM: bifunctional deaminase-reductase domain protein; SPTR: C1YKJ1 dihydrofolate reductase; PFAM: RibD C-terminal domain
YP_003680585.1	KEGG: sen:SACE_3483 hypothetical protein; SPTR: C1YKJ0  uncharacterized protein
YP_003680586.1	InterPro IPR005829:IPR011701:IPR016196; KEGG: msm:MSMEG_3398 integral membrane transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YKI9 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003680587.1	COGs: COG0624 acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR010182:IPR011650:IPR002933; KEGG: msm:MSMEG_3397 acetylornithine deacetylase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: C1YKI8 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
YP_003680588.1	InterPro IPR002109:IPR012336:IPR012335; KEGG: mlu:Mlut_22520 glutaredoxin-like protein; PFAM: glutaredoxin; SPTR: C1YKI7 glutaredoxin-like protein; PFAM: glutaredoxin; TIGRFAM: glutaredoxin-like protein
YP_003680589.1	InterPro IPR000086:IPR015797; KEGG: fra:Francci3_0900 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: C1YKI6 ADP-ribose pyrophosphatase; PFAM: NUDIX domain
YP_003680590.1	COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: bfa:Bfae_03700 choline/carnitine/betaine transport; PFAM: BCCT transporter; SPTR: C1YKI4 Choline/carnitine/betaine transport; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport
YP_003680591.1	KEGG: sen:SACE_0588 hypothetical protein; SPTR: C1YKI1  uncharacterized protein
YP_003680592.1	KEGG: sen:SACE_0587 hypothetical protein; SPTR: C1YKI0  uncharacterized protein
YP_003680593.1	KEGG: svi:Svir_23730 hypothetical protein; SPTR: C1YIC2  uncharacterized protein; PFAM: protein of unknown function, DUF600
YP_003680594.1	InterPro IPR000169; KEGG: sma:SAV_5443 hypothetical protein; SPTR: C1YKH8  uncharacterized protein
YP_003680595.1	KEGG: fre:Franean1_1480 hypothetical protein; SPTR: C1YKH7  uncharacterized protein
YP_003680596.1	KEGG: sgr:SGR_3219 hypothetical protein; SPTR: C1YKH6  uncharacterized protein
YP_003680597.1	KEGG: ami:Amir_6260 hypothetical protein; SPTR: C1YKH5  uncharacterized protein
YP_003680598.1	InterProIPR019734:IPR000767:IPR013026:IPR001440:IPR 011990:IPR002182; KEGG: ami:Amir_6259 NB-ARC domain protein; PFAM: NB-ARC domain protein; hypotheticalprotein; SPTR: C1YKH4  transcriptional regulator; PFAM: NB-ARC domain
YP_003680599.1	InterPro IPR012312; KEGG: sen:SACE_4177 hypothetical protein; PFAM: hemerythrin HHE cation binding domain protein; SPTR: C1YKH3 hemerythrin HHE cation binding domain-containing protein; PFAM: hemerythrin HHE cation binding domain
YP_003680600.1	COGs: COG3973 Superfamily I DNA and RNA helicase; InterPro IPR014016; KEGG: tcu:Tcur_2547 superfamily I DNA and RNA helicase-like protein; SPTR: C1YKH2 DNA/RNA helicase, superfamily I
YP_003680601.1	KEGG: ami:Amir_0599 hypothetical protein; SPTR: C1YKH1  uncharacterized protein
YP_003680602.1	KEGG: svi:Svir_26900 hypothetical protein; SPTR: C1YKH0  uncharacterized protein
YP_003680603.1	KEGG: fra:Francci3_2740 hypothetical protein; SPTR: C1YKG9  uncharacterized protein
YP_003680604.1	COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterProIPR000595:IPR012318:IPR018490:IPR014710:IPR 011991; KEGG: saq:Sare_1644 Crp/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; SPTR: C1YKG8 cAMP-binding protein; PFAM: Cyclic nucleotide-binding domain
YP_003680605.1	KEGG: cur:cur_0031  arsenic-transport protein; SPTR: C1YKG7  uncharacterized protein
YP_003680606.1	KEGG: fal:FRAAL1511 hypothetical protein; SPTR: C1YKG5  uncharacterized protein
YP_003680607.1	KEGG: ppg:PputGB1_2791  sigma54 specific transcriptional regulator; SPTR: C9Z0F2  uncharacterized protein
YP_003680608.1	InterPro IPR004027; KEGG: msm:MSMEG_1285 TPR repeat-containing protein; PFAM: SEC-C motif domain protein; SPTR: C1YKG4 SEC-C motif-containing protein; PFAM: SEC-C motif
YP_003680609.1	COGs: COG1285 membrane protein; InterPro IPR003416; KEGG: cyb:CYB_2116 MgtC family protein; PFAM: MgtC/SapB transporter; SPTR: C1YKG3 Uncharacterized membrane protein; PFAM: MgtC family
YP_003680610.1	COGs: COG0286 type I restriction-modification system methyltransferase subunit; InterPro IPR002296:IPR003356; KEGG: sco:SCO3104 hypothetical protein; PFAM: N-6 DNA methylase; SPTR: C1YKG2 type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA methylase
YP_003680611.1	COGs: COG2378 transcriptional regulator protein; InterPro IPR013196:IPR001034:IPR018356; KEGG: saq:Sare_4377 helix-turn-helix type 11 domain-containing protein; PFAM: hypothetical protein; SPTR: C1YKG1 Predicted transcriptional regulator, COG2378; PFAM: HTH domain
YP_003680612.1	InterPro IPR000639:IPR016292:IPR010497:IPR000073; KEGG: saq:Sare_4378 epocide hydrolase domain-containing protein; PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; PRIAM: Microsomal epoxide hydrolase; SPTR: C1YKG0 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold; Epoxide hydrolase N terminus
YP_003680613.1	InterPro IPR003961:IPR008963:IPR004843; KEGG: oih:OB0802 hypothetical protein; PFAM: metallophosphoesterase; SPTR: C1YKF9 Predicted phosphohydrolase; PFAM: Calcineurin-like phosphoesterase
YP_003680614.1	KEGG: svi:Svir_23730 hypothetical protein; SPTR: C1YKF8  uncharacterized protein
YP_003680615.1	KEGG: sgr:SGR_2088  lipoprotein; SPTR: C1YKF7  uncharacterized protein
YP_003680616.1	COGs: COG3012 conserved hypothetical protein; KEGG: sgr:SGR_1052 hypothetical protein; SPTR: C1YKF6 Uncharacterized conserved protein
YP_003680617.1	InterPro IPR017909:IPR012338; KEGG: tcu:Tcur_4900 hypothetical protein; SPTR: C1YKF5 beta-lactamase class A
YP_003680618.1	InterPro IPR015943:IPR011044:IPR011009; KEGG: tcu:Tcur_1517 serine/threonine protein kinase; SPTR: C1YKF4  uncharacterized protein
YP_003680619.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR008271:IPR011009:IPR017442:IPR000719:IPR 017441:IPR015943:IPR011044; KEGG: fre:Franean1_5221 serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SPTR: C1YKF3 protein kinase family protein; PFAM: protein kinase domain
YP_003680620.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR017441:IPR008271:IPR000719:IPR011009:IPR 011044:IPR017442:IPR020635:IPR002290:IPR015943; KEGG: fal:FRAAL0578  serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: C1YKF2 protein kinase family protein; PFAM: protein kinase domain
YP_003680621.1	KEGG: tfu:Tfu_2984 hypothetical protein; SPTR: C1YKF1  uncharacterized protein
YP_003680622.1	InterPro IPR018258:IPR016196:IPR011701; KEGG: sma:SAV_5646 transmembrane efflux protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YKF0 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
YP_003680623.1	InterPro IPR001387; KEGG: sma:SAV_5647 DNA-binding protein; SMART: helix-turn-helix domain protein; SPTR: C1YKE9  uncharacterized protein
YP_003680624.1	COGs: COG1063 threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR016040:IPR011032:IPR013154; KEGG: tfu:Tfu_2814  dehydrogenase; PFAM: alcohol dehydrogenase GroES domain protein; SPTR: C1YKE8 Theronine dehydrogenase-like Zn-dependent dehydrogenase; PFAM: alcohol dehydrogenase GroES-like domain
YP_003680625.1	COGs: COG0318 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: nfa:nfa47430 acyl-CoA synthetase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YKE7 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme
YP_003680626.1	COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: ami:Amir_4192 ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; SPTR: C1YKE6 Fe2+/Zn2+ uptake regulation protein; PFAM: ferric uptake regulator family
YP_003680627.1	COGs: COG0753 catalase; InterProIPR018028:IPR010582:IPR020835:IPR011614:IPR 002226; KEGG: svi:Svir_21110 catalase; PFAM: catalase related subgroup; catalase domain protein; PRIAM: catalase; SPTR: C1YKE5 catalase; PFAM: catalase; catalase-related immune-responsive
YP_003680628.1	InterPro IPR020683:IPR002110; KEGG: sco:SCO0380 hypothetical protein; SMART: ankyrin; SPTR: C1YKE4 ankyrin repeat-containing protein; PFAM: ankyrin repeat
YP_003680629.1	InterPro IPR006764; KEGG: tcu:Tcur_4001 protein of unknown function DUF574; PFAM: protein of unknown function DUF574; SPTR: C1YKE3  uncharacterized protein; PFAM: protein of unknown function (DUF574)
YP_003680630.1	InterProIPR018208:IPR012291:IPR001137:IPR001919:IPR 013319:IPR008985:IPR008965; KEGG: tfu:Tfu_1213 xylanase; PFAM: glycoside hydrolase family 11; cellulose-binding family II; PRIAM: endo-1,4-beta-xylanase; SMART: cellulose-binding family II; SPTR: C1YKE1 endo-1,4-beta-xylanase; PFAM: glycosyl hydrolases family 11
YP_003680631.1	COGs: COG3526 conserved hypothetical protein; InterPro IPR011893:IPR007843; KEGG: fre:Franean1_2265  selenoprotein; PFAM: Selenoprotein W-related; SPTR: C1YKE0 SelT/selW/selH selenoprotein domain protein; TIGRFAM: conserved hypothetical protein; PFAM: Rdx family; TIGRFAM: selT/selW/selH selenoprotein domain
YP_003680632.1	COGs: COG4129 membrane protein; KEGG: tfu:Tfu_2813 hypothetical protein; SPTR: C1YKD9 Predicted membrane protein, COG4129
YP_003680633.1	InterPro IPR003607:IPR006675:IPR006674; KEGG: fal:FRAAL3713 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: C1YKD8 Uncharacterized domain HDIG-containing protein; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG
YP_003680634.1	COGs: COG2514 ring-cleavage extradiol dioxygenase; InterPro IPR004360; KEGG: cgt:cgR_1972 hypothetical protein; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YKD7 Predicted ring-cleavage extradiol dioxygenase; PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003680635.1	KEGG: sen:SACE_2943 hypothetical protein; SPTR: C1YKD6  uncharacterized protein; PFAM: protein of unknown function (DUF419)
YP_003680636.1	KEGG: bfa:Bfae_15660 hypothetical protein; SPTR: C1YKD5  uncharacterized protein
YP_003680637.1	InterPro IPR011600; KEGG: kra:Krad_0293 lipoprotein; PFAM: peptidase C14 caspase catalytic subunit p20; SPTR: C1YKD4 Uncharacterized conserved protein; PFAM: Caspase domain
YP_003680638.1	KEGG: sco:SCO6862 hypothetical protein; SPTR: C1YKD3  uncharacterized protein
YP_003680639.1	InterPro IPR017909:IPR006311:IPR002502; KEGG: svi:Svir_35340 negative regulator of beta-lactamase expression; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; SPTR: C1YKD2 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase
YP_003680640.1	KEGG: hypothetical protein; SPTR: Q9FJA4 Non-LTR retroelement reverse transcriptase-like protein
YP_003680641.1	COGs: COG4889 helicase; InterPro IPR002296; KEGG: fra:Francci3_1102  DNA methyltransferase; SPTR: C1YKD0  uncharacterized protein; PFAM: N-6 DNA methylase
YP_003680642.1	KEGG: ach:Achl_3531 glycoside hydrolase family 43; SPTR: C1YKC9  uncharacterized protein
YP_003680643.1	KEGG: fal:FRAAL1368 hypothetical protein; SPTR: C1YKC8  uncharacterized protein
YP_003680644.1	COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; InterPro IPR011335:IPR007569; KEGG: tfu:Tfu_0720 superfamily protein I DNA/RNA helicase; PFAM: protein of unknown function DUF559; SPTR: C1YKC5  uncharacterized protein; PFAM: protein of unknown function (DUF559)
YP_003680645.1	COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR001650:IPR014021:IPR014001:IPR000330; KEGG: tcu:Tcur_2545 helicase; PFAM: helicase; SNF2-related protein; SMART: helicase; DEAD-like helicase; SPTR: C1YKC4 DNA/RNA helicase, superfamily II, SNF2 family; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain
YP_003680646.1	InterPro IPR002296:IPR002052; KEGG: tcu:Tcur_2544 hypothetical protein; SPTR: C1YKC3  uncharacterized protein
YP_003680647.1	InterPro IPR001650; KEGG: tcu:Tcur_2521 helicase domain protein; PFAM: helicase; SPTR: C1YKC2 Helicase family protein; PFAM: Helicase conserved C-terminal domain
YP_003680648.1	InterPro IPR018973; KEGG: tcu:Tcur_2520 hypothetical protein; PFAM: protein of unknown function DUF1998; SPTR: C1YKC1  uncharacterized protein; PFAM: Domain of unknown function (DUF1998)
YP_003680649.1	COGs: COG1502 phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: fal:FRAAL0264 endonuclease; SPTR: C1YKC0  uncharacterized protein
YP_003680650.1	COGs: COG0286 type I restriction-modification system methyltransferase subunit; InterPro IPR002296:IPR003356:IPR002052; KEGG: sro:Sros_1580 type I restriction-modification system methyltransferase subunit-like protein; PFAM: N-6 DNA methylase; SPTR: C1YKB9 type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA methylase
YP_003680651.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR008271:IPR011009:IPR017442:IPR000719:IPR 017441; KEGG: svi:Svir_35230 serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SPTR: C1YKB8 serine/threonine protein kinase; PFAM: protein kinase domain
YP_003680652.1	COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016:IPR000212; KEGG: tfu:Tfu_0064  DNA helicase; PFAM: UvrD/REP helicase; SPTR: C1YKB7 DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase
YP_003680653.1	COGs: COG3472 conserved hypothetical protein; InterPro IPR004919:IPR018651; KEGG: tfu:Tfu_0065 hypothetical protein; PFAM: protein of unknown function DUF2081; protein of unknown function DUF262; SPTR: C1YKB6 Uncharacterized conserved protein; PFAM: Uncharacterized conserved protein (DUF2081); protein of unknown function DUF262
YP_003680654.1	InterPro IPR001876; KEGG: SOLH; small optic lobes homolog (Drosophila); K08582 calpain-15; SMART: zinc finger RanBP2-type; SPTR: C1YKB5  uncharacterized protein
YP_003680655.1	KEGG: fal:FRAAL4353 hypothetical protein; SPTR: C1YKB3  uncharacterized protein
YP_003680656.1	InterPro IPR002035; KEGG: tfu:Tfu_0599 hypothetical protein; SMART: von Willebrand factor type A; SPTR: C1YKB2  uncharacterized protein
YP_003680657.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR008271:IPR000719:IPR011009:IPR017442:IPR 002290; KEGG: tfu:Tfu_0601 serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; SPTR: C1YKB1 protein kinase family protein; PFAM: protein kinase domain
YP_003680658.1	InterPro IPR001932; KEGG: tfu:Tfu_0600 hypothetical protein; SPTR: C1YKB0 serine/threonine protein phosphatase
YP_003680659.1	KEGG: sgr:SGR_3836 hypothetical protein; SPTR: C1YKA9  uncharacterized protein; PFAM: SPFH domain / Band 7 family
YP_003680660.1	InterPro IPR016024; KEGG: sro:Sros_6887 hypothetical protein; SPTR: C1YKA8  uncharacterized protein
YP_003680661.1	KEGG: npu:Npun_BF098 fis family transcriptional regulator; SPTR: C1YKA7  uncharacterized protein
YP_003680662.1	KEGG: tma:TM1063 oligopeptide ABC transporter ATP-binding protein; SPTR: C1YKA6  uncharacterized protein
YP_003680663.1	COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: svi:Svir_20150 predicted Na+-dependent transporter; PFAM: Bile acid:sodium symporter; SPTR: C1YKA5 Predicted Na+-dependent transporter; PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter
YP_003680664.1	COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: sro:Sros_7869 hypothetical protein; PFAM: restriction endonuclease; SPTR: C1YKA4 Restriction endonuclease; PFAM: Restriction endonuclease
YP_003680665.1	KEGG: ami:Amir_4740 hypothetical protein; SPTR: C1YKA3  uncharacterized protein
YP_003680666.1	COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR019945:IPR016048; KEGG: sgr:SGR_6674  dehydrogenase; PFAM: Luciferase-like, subgroup; SPTR: C1YKA2 Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; TIGRFAM: F420-dependent oxidoreductase, G6PDH family; PFAM: Luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase, G6PDH family
YP_003680667.1	COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR003042:IPR002938; KEGG: sen:SACE_4643 monooxygenase, FAD-binding protein; PFAM: monooxygenase FAD-binding; SPTR: C1YKA1 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain
YP_003680668.1	COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: kra:Krad_0719 ABC transporter; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YKA0 ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter
YP_003680669.1	COGs: COG2124 cytochrome P450; InterPro IPR017972:IPR002401:IPR001128:IPR017973; KEGG: tfu:Tfu_2802  cytochrome P450; PFAM: cytochrome P450; SPTR: C1YK99 cytochrome P450; PFAM: cytochrome P450
YP_003680670.1	COGs: COG2124 cytochrome P450; InterPro IPR001128:IPR002397; KEGG: tfu:Tfu_2803  cytochrome P450-family protein; SPTR: C1YK98 cytochrome P450
YP_003680671.1	COGs: COG2229 GTPase; InterPro IPR004130; KEGG: ami:Amir_4813 protein of unknown function ATP binding; PFAM: protein of unknown function ATP binding; SPTR: C1YK97 Predicted GTPase, COG2229; PFAM: Conserved hypothetical ATP binding protein
YP_003680672.1	InterPro IPR007995; KEGG: tfu:Tfu_2805 hypothetical protein; PFAM: protein of unknown function DUF742; SPTR: C1YK96  uncharacterized protein; PFAM: protein of unknown function (DUF742)
YP_003680673.1	InterPro IPR004942; KEGG: tfu:Tfu_2806 hypothetical protein; PFAM: Roadblock/LC7 family protein; SPTR: C1YK95 Uncharacterized conserved protein; PFAM: Roadblock/LC7 domain
YP_003680674.1	InterPro IPR003594:IPR005467; KEGG: tfu:Tfu_2807 ATP-binding region, ATPase-like; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YK94 histidine kinase; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003680675.1	KEGG: tfu:Tfu_1759 hypothetical protein; SPTR: C1YK93  uncharacterized protein
YP_003680676.1	COGs: COG0647 sugar phosphatase of the HAD superfamily; InterPro IPR005834:IPR006357; KEGG: tfu:Tfu_1760 HAD family hydrolase; PFAM: haloacid dehalogenase; SPTR: C1YK92 Predicted sugar phosphatase of HAD superfamily; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; TIGRFAM: HAD-superfamily subfamily IIA hydrolase, TIGR01457; Haloacid Dehalogenase Superfamily class (subfamily) IIA
YP_003680677.1	KEGG: tfu:Tfu_1835 hypothetical protein; SPTR: C1YK91  uncharacterized protein; PFAM: phosphatidylinositol 3- and 4-kinase
YP_003680678.1	KEGG: tfu:Tfu_1836 hypothetical protein; SPTR: C1YK90  uncharacterized protein; PFAM: protein of unknown function (DUF3090)
YP_003680679.1	InterPro IPR011944; KEGG: nfa:nfa14200 hypothetical protein; SPTR: C1YK89  uncharacterized protein; TIGRFAM: conserved hypothetical protein
YP_003680680.1	COGs: COG0406 fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: tfu:Tfu_1837  phosphatase; PFAM: phosphoglycerate mutase; SPTR: C1YK88 fructose-2,6-bisphosphatase; PFAM: phosphoglycerate mutase family
YP_003680681.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: tfu:Tfu_1839  oxidoreductase; PFAM: aldo/keto reductase; SPTR: C1YK87 Predicted oxidoreductase similar to aryl-alcohol dehydrogenase; PFAM: Aldo/keto reductase family
YP_003680682.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR011251:IPR016167:IPR016166:IPR016048:IPR 006094:IPR012951:IPR019952:IPR006093; KEGG: bcv:Bcav_0926 FAD linked oxidase domain protein; PFAM: FAD linked oxidase; Luciferase-like, subgroup; Berberine/berberine domain protein; SPTR: C1YK86 FAD/FMN-dependent dehydrogenase; TIGRFAM:  F420-dependent oxidoreductase; PFAM: FAD binding domain; Berberine and berberine like; Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv1855c family
YP_003680683.1	COGs: COG1846 transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: bcv:Bcav_0927 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YK84 transcriptional regulator; PFAM: MarR family
YP_003680684.1	COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) subunit alpha - helicase superfamily I member; KEGG: tfu:Tfu_1840 hypothetical protein; SPTR: C1YK83  uncharacterized protein
YP_003680685.1	KEGG: GJ19835 gene product from transcript GJ19835-RA; SPTR: C1YK82  uncharacterized protein
YP_003680686.1	InterPro IPR007278; KEGG: tfu:Tfu_1802 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YK81  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003680687.1	InterPro IPR007278; KEGG: tfu:Tfu_1802 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YK80  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003680688.1	InterPro IPR001387:IPR010982; KEGG: tfu:Tfu_1656 helix-hairpin-helix DNA-binding motif-containing protein; SPTR: C1YK79  uncharacterized protein
YP_003680689.1	InterPro IPR003594; KEGG: tcu:Tcur_1945  anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: C1YK78 histidine kinase; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003680690.1	InterPro IPR009061; KEGG: gbr:Gbro_1042 DNA binding domain protein, excisionase family; SPTR: C1YK77  uncharacterized protein
YP_003680691.1	KEGG: bcv:Bcav_1518 hypothetical protein; SPTR: C1YK76  uncharacterized protein
YP_003680692.1	COGs: COG1846 transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: bcv:Bcav_1519 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YK75 transcriptional regulator; PFAM: MarR family
YP_003680693.1	InterPro IPR012287:IPR001647:IPR009057:IPR011075; KEGG: sro:Sros_5235 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YK74 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003680694.1	COGs: COG1680 beta-lactamase class C and other penicillin binding protein; InterPro IPR001466:IPR012338; KEGG: ele:Elen_1788 beta-lactamase; PFAM: beta-lactamase; SPTR: C1YK73 Penicillin-binding protein, beta-lactamase class C; PFAM: beta-lactamase
YP_003680695.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002198:IPR002347; KEGG: tfu:Tfu_1841  3-ketoacyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YK72  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003680696.1	COGs: COG0623 enoyl-(acyl-carrier-protein); InterPro IPR016040:IPR002198; KEGG: tfu:Tfu_1842 enoyl-(acyl carrier protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YK71 enoyl-(acyl-carrier-protein) reductase (NADH); PFAM: short chain dehydrogenase
YP_003680697.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR011284:IPR002347; KEGG: tfu:Tfu_1843 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YK70 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase
YP_003680698.1	KEGG: cpb:Cphamn1_2304 polysaccharide biosynthesis protein; SPTR: C1YK69  uncharacterized protein
YP_003680699.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR001789:IPR000792:IPR011991:IPR011006:IPR 016032; KEGG: tfu:Tfu_1845 LuxR response regulator receiver; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YK68 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003680700.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594:IPR002345; KEGG: tfu:Tfu_1846 signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C1YK67 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003680701.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: tfu:Tfu_1847 peptide ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YK66 ABC-type antimicrobial peptide transporter ATPase component; PFAM: ABC transporter
YP_003680702.1	COGs: COG4591 ABC-type transporter involved in lipoprotein release permease; InterPro IPR003838; KEGG: sro:Sros_1744 ABC-type transporter involved in lysophospholipase L1 biosynthesis permease-like protein; PFAM: protein of unknown function DUF214; SPTR: C1YK65 ABC-type transporter involved in lipoprotein release, permease; PFAM: Predicted permease
YP_003680703.1	KEGG: midasin ; K13093 HIV Tat-specific factor 1; SPTR: C1YK64  uncharacterized protein
YP_003680704.1	COGs: COG0463 glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: tfu:Tfu_1850 dolichyl-phosphate beta-D-mannosyltransferase; PFAM: glycosyl transferase family 2; SPTR: C1YK63 glycosyl transferase; PFAM: glycosyl transferase family 2
YP_003680705.1	COGs: COG1349 transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR014036:IPR018356; KEGG: tfu:Tfu_1851 regulatory protein, DeoR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: C1YK62 transcriptional regulator of sugar metabolism; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_003680706.1	KEGG: fal:FRAAL6239 hypothetical protein; SPTR: C1YK61  uncharacterized protein
YP_003680707.1	COGs: COG2091 phosphopantetheinyl transferase; InterPro IPR008278; KEGG: tfu:Tfu_1855 4'-phosphopantetheinyl transferase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: C1YK60 phosphopantetheinyl transferase; PFAM: 4'-phosphopantetheinyl transferase superfamily
YP_003680708.1	COGs: COG1960 acyl-CoA dehydrogenase; InterProIPR013786:IPR006091:IPR006089:IPR009100:IPR 006090:IPR013764:IPR006092:IPR009075; KEGG: sro:Sros_5850 acyl-CoA dehydrogenase, C-terminal domain protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: C1YK59 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain
YP_003680709.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: sro:Sros_2019 LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: C1YK58 transcriptional regulator, COG0583; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_003680710.1	COGs: COG0683 ABC-type branched-chain amino acid transporters periplasmic component; InterPro IPR001828; KEGG: tfu:Tfu_1779 hypothetical protein; PFAM: extracellular ligand-binding receptor; SPTR: C1YK57 amino acid-binding protein; PFAM: Receptor family ligand binding region
YP_003680711.1	COGs: COG0398 conserved hypothetical protein; InterPro IPR015414; KEGG: stp:Strop_4229 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: C1YK56 Uncharacterized conserved protein; PFAM: SNARE associated Golgi protein
YP_003680712.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR009082:IPR003660:IPR003594:IPR003661:IPR 005467:IPR004358; KEGG: sro:Sros_9262 signal transduction histidine kinase-like protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: C1YK55 Sensor protein; PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003680713.1	COGs: COG3689 membrane protein; KEGG: tfu:Tfu_1874 hypothetical protein; SPTR: C1YK54  uncharacterized protein
YP_003680714.1	COGs: COG0701 permease; InterPro IPR005524; KEGG: tfu:Tfu_1875 hypothetical protein; PFAM: permease; SPTR: C1YK53 Predicted permease; PFAM: Predicted permease
YP_003680715.1	COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: svi:Svir_21700 amino acid carrier protein; PFAM: sodium:alanine symporter; SPTR: C1YK51 amino acid carrier protein; TIGRFAM: amino acid carrier protein; PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein
YP_003680716.1	InterPro IPR005828:IPR016196:IPR004736:IPR005829; KEGG: sro:Sros_8515  transporter; PFAM: general substrate transporter; SPTR: C1YK50 Metabolite-proton symporter; TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: Sugar (and other) transporter; TIGRFAM: metabolite-proton symporter
YP_003680717.1	COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR014001:IPR001650:IPR014021:IPR014014:IPR 011545; KEGG: sro:Sros_5980 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase; helicase; SMART: DEAD-like helicase ; helicase; SPTR: C1YK49 DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_003680718.1	COGs: COG1024 enoyl-CoA hydratase/carnithine racemase; InterPro IPR018376:IPR001753; KEGG: tfu:Tfu_1878 enoyl-CoA hydratase; PFAM: enoyl-CoA hydratase/isomerase; SPTR: C1YK48 enoyl-CoA hydratase; PFAM: enoyl-CoA hydratase/isomerase family
YP_003680719.1	KEGG: tcu:Tcur_2239 hypothetical protein; SPTR: C1YK47 transcriptional regulator
YP_003680720.1	COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR017871:IPR003593:IPR003439; KEGG: tfu:Tfu_1880 ABC transporter ATPase; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YK46 ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter
YP_003680721.1	COGs: COG0628 permease; InterPro IPR002549; KEGG: tfu:Tfu_1881 hypothetical protein; PFAM: protein of unknown function UPF0118; SPTR: C1YK45 Predicted permease; PFAM: Domain of unknown function DUF20
YP_003680722.1	COGs: COG3304 membrane protein; InterPro IPR005185; KEGG: tfu:Tfu_1882 hypothetical protein; PFAM: protein of unknown function DUF307; SPTR: C1YK44 Predicted membrane protein, COG3304; PFAM: Domain of unknown function (DUF307)
YP_003680723.1	InterPro IPR003482; KEGG: tfu:Tfu_1883  regulatory protein; PFAM: transcription factor WhiB; SPTR: Q47NQ3  regulatory protein; PFAM: transcription factor WhiB
YP_003680724.1	COGs: COG1926 phosphoribosyltransferase; InterPro IPR000836; KEGG: tfu:Tfu_1884 hypothetical protein; PFAM: phosphoribosyltransferase; SPTR: C1YK42 Predicted phosphoribosyltransferase; PFAM: phosphoribosyl transferase domain; Dienelactone hydrolase family
YP_003680725.1	COGs: COG1670 acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182:IPR016181; KEGG: svi:Svir_31300 acetyltransferase, ribosomal protein N-acetylase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YK41 acetyltransferase, ribosomal protein N-acetylase; PFAM: acetyltransferase (GNAT) family
YP_003680726.1	InterPro IPR011701:IPR016196; KEGG: tfu:Tfu_1885  integral membrane protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YK40 Fucose permease; PFAM: Major Facilitator Superfamily
YP_003680727.1	KEGG: tfu:Tfu_0363 hypothetical protein; SPTR: C1YK39  uncharacterized protein
YP_003680728.1	KEGG: tfu:Tfu_0362 hypothetical protein; SPTR: C1YK38  uncharacterized protein
YP_003680729.1	KEGG: eta:ETA_17070 hypothetical protein; SPTR: C1YK37  uncharacterized protein
YP_003680730.1	KEGG: ami:Amir_4992 SNARE associated Golgi protein; SPTR: C1YK36  uncharacterized protein
YP_003680731.1	COGs: COG1295 membrane protein; InterPro IPR004664; KEGG: tfu:Tfu_1887 hypothetical protein; PFAM: ribonuclease BN; SPTR: C1YK35 Predicted membrane protein, COG1295; PFAM: ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN)
YP_003680732.1	COGs: COG0155 Sulfite reductase subunit beta (hemoprotein); InterPro IPR005117:IPR006066:IPR006067; KEGG: tfu:Tfu_1888  nitrite/sulphite reductase; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; SPTR: C1YK33 Sulfite reductase subunit beta (Hemoprotein); PFAM: nitrite and sulphite reductase 4Fe-4S domain; nitrite/Sulfite reductase ferredoxin-like half domain
YP_003680733.1	KEGG: cai:Caci_7371 hypothetical protein; SPTR: C1YK32  uncharacterized protein
YP_003680734.1	COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500:IPR014729:IPR011798:IPR004511; KEGG: tfu:Tfu_1889 phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase; SPTR: C1YK31 phosphoadenylylsulfate reductase (thioredoxin); TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin)
YP_003680735.1	COGs: COG2138 conserved hypothetical protein; InterPro IPR002762; KEGG: tfu:Tfu_1890  secreted protein; PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; SPTR: C1YK30 Uncharacterized conserved protein; PFAM: CbiX
YP_003680736.1	COGs: COG0259 pyridoxamine-phosphate oxidase; InterPro IPR012349:IPR011576:IPR019576:IPR009002; KEGG: mab:MAB_3823 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxine 5'-phosphate oxidase dimerisation-like; PRIAM: pyridoxal 5'-phosphate synthase; SPTR: C1YK29 pyridoxamine-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase; pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
YP_003680737.1	COGs: COG1960 acyl-CoA dehydrogenase; InterProIPR006091:IPR013764:IPR006090:IPR009075:IPR 009100:IPR006089; KEGG: svi:Svir_38660 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: C1YK28 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain
YP_003680738.1	COGs: COG1523 type II secretory pathway pullulanase PulA and related glycosidase; InterProIPR013783:IPR013781:IPR011837:IPR014756:IPR 006047:IPR004193:IPR017853; KEGG: tfu:Tfu_1891 glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SPTR: C1YK27 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: alpha amylase, catalytic domain; carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX
YP_003680739.1	COGs: COG1985 Pyrimidine reductase riboflavin biosynthesis; InterPro IPR002734; KEGG: sro:Sros_6709 pyrimidine reductase riboflavin biosynthesis-like protein; PFAM: bifunctional deaminase-reductase domain protein; SPTR: C1YK26 Pyrimidine reductase, riboflavin biosynthesis; PFAM: RibD C-terminal domain
YP_003680740.1	COGs: COG2188 transcriptional regulators; InterPro IPR000524:IPR011991:IPR011663; KEGG: sro:Sros_9128  transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C1YK25 transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_003680741.1	KEGG: tfu:Tfu_1892 hypothetical protein; SPTR: C1YK24  uncharacterized protein
YP_003680742.1	COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR011057:IPR002579; KEGG: sen:SACE_1845 peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase B; PRIAM: peptide-methionine (R)-S-oxide reductase; SPTR: C1YK23 methionine-R-sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase
YP_003680743.1	COGs: COG0688 phosphatidylserine decarboxylase; InterPro IPR004428:IPR003817; KEGG: tfu:Tfu_1894 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; PRIAM: phosphatidylserine decarboxylase; SPTR: C1YK22 phosphatidylserine decarboxylase-related protein; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor-related protein
YP_003680744.1	COGs: COG1183 phosphatidylserine synthase; InterPro IPR000462:IPR004533; KEGG: tfu:Tfu_1895  phosphatidylserine synthase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: C1YK21 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase
YP_003680745.1	COGs: COG3253 conserved hypothetical protein; InterPro IPR010644:IPR011008; KEGG: tfu:Tfu_1896 hypothetical protein; PFAM: chlorite dismutase; SPTR: C1YK20 Uncharacterized conserved protein; PFAM: chlorite dismutase
YP_003680746.1	COGs: COG1232 protoporphyrinogen oxidase; InterPro IPR016040:IPR004572:IPR002937; KEGG: tfu:Tfu_1897 UDP-galactopyranose mutase; PFAM: amine oxidase; PRIAM: protoporphyrinogen oxidase; SPTR: C1YK19 protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: protoporphyrinogen oxidase
YP_003680747.1	KEGG: tfu:Tfu_1898  lipoprotein; SPTR: C1YK18  uncharacterized protein
YP_003680748.1	COGs: COG0407 uroporphyrinogen-III decarboxylase; InterPro IPR000257:IPR006361; KEGG: tfu:Tfu_1899 uroporphyrinogen decarboxylase; PFAM: uroporphyrinogen decarboxylase (URO-D); PRIAM: uroporphyrinogen decarboxylase; SPTR: C1YK17 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase
YP_003680749.1	KEGG: tfu:Tfu_1900 hypothetical protein; SPTR: C1YK16  uncharacterized protein; PFAM: protein of unknown function (DUF3000)
YP_003680750.1	COGs: COG0349 ribonuclease D; InterPro IPR002562:IPR002121:IPR012337; KEGG: tfu:Tfu_1901 HRDC:3'-5' exonuclease; PFAM: 3'-5' exonuclease; HRDC domain protein; SMART: 3'-5' exonuclease; HRDC domain protein; SPTR: C1YK15 ribonuclease D; PFAM: 3'-5' exonuclease; HRDC domain; TIGRFAM: ribonuclease D
YP_003680751.1	InterProIPR019734:IPR011990:IPR013026:IPR001440:IPR 011717; KEGG: tfu:Tfu_1902 hypothetical protein; PFAM: TPR repeat-containing protein; hypothetical protein; SPTR: C1YK14 Tetratricopeptide repeat protein; PFAM: Tetratricopeptide repeat
YP_003680752.1	KEGG: sro:Sros_1772 hypothetical protein; SPTR: C1YK11  uncharacterized protein
YP_003680753.1	COGs: COG0183 acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016038:IPR016039; KEGG: tfu:Tfu_1903 thiolase; PRIAM: acetyl-CoA C-acyltransferase; SPTR: C1YK10 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase, C-terminal domain; thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_003680754.1	COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR016040:IPR013328:IPR001753:IPR006176:IPR 006108:IPR008927; KEGG: tfu:Tfu_1904 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: C1YK09 3-hydroxyacyl-CoA dehydrogenase; PFAM: enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YP_003680755.1	KEGG: sen:SACE_3175 hypothetical protein; SPTR: C1YK08  uncharacterized protein
YP_003680756.1	KEGG: tcu:Tcur_3769 hypothetical protein; SPTR: C1YK07  uncharacterized protein
YP_003680757.1	InterPro IPR016040; KEGG: cvi:CV_0690 dihydrokaempferol 4-reductase; SPTR: C1YK06  uncharacterized protein
YP_003680758.1	COGs: COG1846 transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: ace:Acel_2082 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YK05 transcriptional regulator; PFAM: MarR family
YP_003680759.1	COGs: COG2409 drug exporter of the RND superfamily; InterPro IPR000731; KEGG: sro:Sros_2752 drug exporter of the RND superfamily-like protein; SPTR: C1YK04 Predicted RND superfamily drug exporter; PFAM: MMPL family
YP_003680760.1	KEGG: sco:SCO0867 integral-membrane protein; SPTR: C1YK03  uncharacterized protein
YP_003680761.1	COGs: COG2409 drug exporter of the RND superfamily; InterPro IPR000731:IPR004869; KEGG: tfu:Tfu_1912 MmpL family protein; PFAM: MMPL domain protein; SPTR: C1YK02 Predicted RND superfamily drug exporter; PFAM: MMPL family
YP_003680762.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: tfu:Tfu_1913  transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YK01 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003680763.1	COGs: COG2321 metalloprotease; InterPro IPR007343; KEGG: tfu:Tfu_1914 metalloprotease; PFAM: protein of unknown function zinc metallopeptidase SPTR: C1YK00 Predicted metalloprotease; PFAM:  neutral zinc metallopeptidase
YP_003680764.1	COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR000759:IPR013027; KEGG: tfu:Tfu_1915 ferredoxin/ferredoxin--NADP reductase, PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: C1YJZ9 NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003680765.1	COGs: COG1154 deoxyxylulose-5-phosphate synthase; InterProIPR015941:IPR005475:IPR005476:IPR009014:IPR 005477:IPR005474:IPR020826; KEGG: tfu:Tfu_1917 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: transketolase; transketolase domain protein; SPTR: C1YJZ8 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: transketolase, C-terminal domain; transketolase, pyrimidine binding domain; thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase
YP_003680766.1	InterPro IPR002781; KEGG: tfu:Tfu_1919 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: C1YJZ7  uncharacterized protein; PFAM: Sulfite exporter TauE/SafE
YP_003680767.1	KEGG: fre:Franean1_5474  oxygenase subunit protein; SPTR: C1YJZ6  uncharacterized protein
YP_003680768.1	COGs: COG4214 ABC-type xylose transporter permease component; InterPro IPR001851; KEGG: tfu:Tfu_1920  ABC transporter transmembrane transporter; PFAM: inner-membrane translocator; SPTR: C1YJZ5 ABC-type xylose transporter permease; PFAM: Branched-chain amino acid transporter / permease
YP_003680769.1	COGs: COG1129 ABC-type sugar transporter ATPase component; InterPro IPR003593:IPR003439; KEGG: tfu:Tfu_1921 ABC-type sugar transporter ATPase component; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YJZ4 Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter
YP_003680770.1	COGs: COG4213 ABC-type xylose transporter periplasmic component; KEGG: tfu:Tfu_1922 solute-binding protein; SPTR: C1YJZ3 Monosaccharide ABC transporter substrate-binding protein, CUT2 family
YP_003680771.1	COGs: COG0675 transposase and inactivated derivatives; InterPro IPR018892:IPR010095; KEGG: sro:Sros_6879 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; Retro-transposon transporting, conserved site; SPTR: C1YJZ2 transposase, IS605 OrfB family, central region; TIGRFAM: transposase, IS605 OrfB family; PFAM:  transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region
YP_003680772.1	COGs: COG1940 transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: tfu:Tfu_1923  transcriptional repressor protein; PFAM: ROK family protein; SPTR: C1YJZ1 transcriptional regulator/sugar kinase; PFAM: ROK family
YP_003680773.1	InterPro IPR004838; KEGG: tfu:Tfu_1924 hypothetical protein; SPTR: C1YJZ0 Uridine kinase; PFAM: ArgK protein
YP_003680774.1	KEGG: hna:Hneap_0961 alpha/beta superfamily hydrolase/acyltransferase; SPTR: C1YJY9  uncharacterized protein; PFAM:  lysophospholipase; TAP-like protein
YP_003680775.1	InterPro IPR001647:IPR012287:IPR011075:IPR009057; KEGG: sgr:SGR_1284 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YJY8 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003680776.1	InterPro IPR013099; KEGG: mem:Memar_1772 ion transport 2 domain-containing protein; PFAM: ion transport 2 domain protein; SPTR: C1YJY7 ion channel protein; PFAM: ion channel
YP_003680777.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR020635:IPR002290:IPR000719:IPR017442:IPR 011009:IPR017441:IPR008271; KEGG: tcu:Tcur_1696 serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: C1YJY6 serine/threonine protein kinase; PFAM: protein kinase domain
YP_003680778.1	KEGG: sgr:SGR_1971 hypothetical protein; SPTR: C1YJY5  uncharacterized protein
YP_003680779.1	KEGG: acr:Acry_2057 nicotinate phosphoribosyltransferase; SPTR: C1YJY4  uncharacterized protein
YP_003680780.1	KEGG: hypothetical protein; SPTR: C1YJY3  uncharacterized protein
YP_003680781.1	KEGG: Ing3; CG6632 gene product from transcript CG6632-RA; K11319 inhibitor of growth protein 3; SPTR: C1YJY2  uncharacterized protein
YP_003680782.1	COGs: COG5637 integral membrane protein; InterPro IPR005031; KEGG: stp:Strop_1754 cyclase/dehydrase; PFAM: cyclase/dehydrase; SPTR: C1YJY1 polyketide cyclase / dehydrase family protein; PFAM: polyketide cyclase / dehydrase and lipid transport
YP_003680783.1	COGs: COG1048 Aconitase A; InterProIPR015931:IPR015932:IPR015928:IPR001030:IPR 000573:IPR006249:IPR018136; KEGG: tfu:Tfu_1925 aconitate hydratase; PFAM: aconitate hydratase domain protein; SPTR: C1YJY0 Aconitase; TIGRFAM: aconitate hydratase 1; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1
YP_003680784.1	COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR019952:IPR016048; KEGG: tfu:Tfu_1926 hypothetical protein; PFAM: Luciferase-like, subgroup; SPTR: C1YJX9 Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; TIGRFAM:  F420-dependent oxidoreductase; PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv1855c family
YP_003680785.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR007627:IPR013249:IPR013325:IPR013324:IPR 014284; KEGG: sma:SAV_4064 ECF subfamily RNA polymerase sigma factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: C1YJX8 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003680786.1	KEGG: sco:SCO4147 integral membrane protein; SPTR: C1YJX7  uncharacterized protein
YP_003680787.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: sco:SCO4148 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YJX6 ABC-type multidrug transporter ATPase component; PFAM: ABC transporter
YP_003680788.1	KEGG: tfu:Tfu_0825 ComEC/Rec2-related protein; SPTR: C1YJX5  uncharacterized protein
YP_003680789.1	InterPro IPR019026; KEGG: sro:Sros_2018 hypothetical protein; PFAM: peptidase M64, IgA; SPTR: C1YJX4 IgA peptidase M64; PFAM: IgA peptidase M64
YP_003680790.1	COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR010280:IPR001566:IPR002792:IPR016027; KEGG: tfu:Tfu_1927 23S rRNA methyltransferase/RumA; PFAM: deoxyribonuclease/rho motif-related TRAM; (uracil-5)-methyltransferase; SPTR: C1YJX3 23S rRNA m(5)U-1939 methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: TRAM domain; tRNA (uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA
YP_003680791.1	COGs: COG0569 K+ transporters NAD-binding component; InterPro IPR016040:IPR003148:IPR006037:IPR006036; KEGG: tfu:Tfu_1928  potassium transporter; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: C1YJX2 K+ transporter NAD-binding component; PFAM: TrkA-N domain; TrkA-C domain
YP_003680792.1	COGs: COG0569 K+ transporters NAD-binding component; InterPro IPR016040:IPR003148:IPR006037:IPR006036; KEGG: tfu:Tfu_1929  potassium uptake protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: C1YJX1 K+ transporter NAD-binding component; PFAM: TrkA-N domain; TrkA-C domain
YP_003680793.1	KEGG: tfu:Tfu_1932 hypothetical protein; SPTR: C1YJX0  uncharacterized protein; PFAM: protein of unknown function (DUF3159)
YP_003680794.1	COGs: COG4826 serine protease inhibitor; InterPro IPR000215; KEGG: tfu:Tfu_1933 proteinase inhibitor I4, serpin; PFAM: proteinase inhibitor I4 serpin; SMART: proteinase inhibitor I4 serpin; SPTR: C1YJW9 serine protease inhibitor; PFAM: Serpin (serine protease inhibitor)
YP_003680795.1	COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: nca:Noca_1963 LmbE family protein; PFAM: LmbE family protein; SPTR: C1YJW8 Uncharacterized LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase
YP_003680796.1	KEGG: tfu:Tfu_1934 hypothetical protein; SPTR: C1YJW7  uncharacterized protein; PFAM: protein of unknown function (DUF3710)
YP_003680797.1	COGs: COG0756 dUTPase; InterPro IPR008180:IPR008181; KEGG: tfu:Tfu_1935 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: deoxyUTP pyrophosphatase; SPTR: C1YJW6 deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut)
YP_003680798.1	COGs: COG0525 Valyl-tRNA synthetase; InterProIPR009008:IPR014729:IPR002300:IPR019754:IPR 013155:IPR001412:IPR009080; KEGG: tfu:Tfu_1936 valyl-tRNA synthetase; PFAM: tRNA synthetase valyl/leucyl anticodon-binding; aminoacyl-tRNA synthetase class Ia; SPTR: C1YJW5 Valyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); anticodon-binding domain
YP_003680799.1	KEGG: tfu:Tfu_1937 hypothetical protein; SPTR: C1YJW4  uncharacterized protein
YP_003680800.1	KEGG: tfu:Tfu_1939 hypothetical protein; SPTR: C1YJW3  uncharacterized protein
YP_003680801.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660:IPR003661:IPR003594:IPR005467:IPR 004358:IPR009082; KEGG: tfu:Tfu_1940 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SPTR: C1YJW2 Sensor protein; PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003680802.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011991:IPR001867:IPR011006; KEGG: tfu:Tfu_1941 response regulator receiver; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C1YJW1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal
YP_003680803.1	KEGG: sro:Sros_6774 hypothetical protein; SPTR: C1YJW0  uncharacterized protein
YP_003680804.1	COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR000760:IPR020583; KEGG: tfu:Tfu_1943 inositol-1(or 4)-monophosphatase; PFAM: inositol monophosphatase; SPTR: C1YJV9 inositol monophosphatase/fructose-1,6-bisphosphatase family protein; PFAM: inositol monophosphatase family
YP_003680805.1	COGs: COG1506 dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011042:IPR001375; KEGG: sro:Sros_6776 peptidase S9 prolyl oligopeptidase; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; SPTR: C1YJV8 dipeptidyl aminopeptidase/acylaminoacyl peptidase; PFAM: prolyl oligopeptidase family
YP_003680806.1	COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); InterPro IPR001015; KEGG: tfu:Tfu_1945 ferrochelatase; PFAM: ferrochelatase; PRIAM: Ferrochelatase; SPTR: C1YJV7 Ferrochelatase; TIGRFAM: ferrochelatase; PFAM: Ferrochelatase; TIGRFAM: ferrochelatase
YP_003680807.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR016168:IPR016166:IPR006094:IPR007173:IPR 010032:IPR006093; KEGG: tfu:Tfu_1946 FAD-linked oxidoreductase; PFAM: D-arabinono-14-lactone oxidase; FAD linked oxidase; PRIAM: L-gulonolactone oxidase; SPTR: C1YJV6 FAD-linked oxidoreductase; TIGRFAM: FAD-linked oxidoreductase; PFAM: D-arabinono-1,4-lactone oxidase; FAD binding domain; TIGRFAM: FAD-linked oxidoreductase
YP_003680808.1	KEGG: sgr:SGR_1676 hypothetical protein; SPTR: C1YJV5  uncharacterized protein
YP_003680809.1	KEGG: sro:Sros_6783 hypothetical protein; SPTR: C1YJV4  uncharacterized protein; PFAM: protein of unknown function (DUF3071)
YP_003680810.1	COGs: COG3428 membrane protein; InterPro IPR005182; KEGG: tfu:Tfu_1948 hypothetical protein; PFAM: membrane-flanked domain; SPTR: C1YW15 Predicted membrane protein, COG3428; PFAM: Bacterial membrane flanked domain
YP_003680811.1	COGs: COG3402 conserved hypothetical protein; InterPro IPR005182; KEGG: tfu:Tfu_1949 hypothetical protein; PFAM: membrane-flanked domain; SPTR: C1YW14 Uncharacterized conserved protein; PFAM: Bacterial membrane flanked domain
YP_003680812.1	COGs: COG0675 transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: sma:SAV_61 IS200-like transposase; PFAM:  transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; SPTR: C1YW13 transposase, IS605 OrfB family, central region; TIGRFAM: transposase, IS605 OrfB family; PFAM: Helix-turn-helix domain; transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region
YP_003680813.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR003593:IPR003439:IPR005894:IPR017871; KEGG: tcu:Tcur_1684 daunorubicin resistance ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YW12 Daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase; PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit
YP_003680814.1	InterPro IPR000412:IPR013525; KEGG: sen:SACE_0423 multidrug ABC transporter permease; PFAM: ABC transporter; SPTR: C1YW11 ABC-type multidrug transporter permease; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family
YP_003680815.1	COGs: COG3903 ATPase; InterPro IPR000767:IPR001867:IPR005158:IPR016032; KEGG: sro:Sros_6790 ATPase-like protein; PFAM: transcriptional activator domain; transcriptional regulator domain protein; SPTR: C1YW10 Predicted ATPase, COG3903; PFAM: Bacterial transcriptional activator domain; transcriptional regulatory protein, C terminal
YP_003680816.1	COGs: COG1881 phospholipid-binding protein; InterPro IPR008914; KEGG: tfu:Tfu_1950 PBP family phospholipid-binding protein; PFAM: PEBP family protein; SPTR: C1YW09 phospholipid-binding protein; PFAM: phosphatidylethanolamine-binding protein; TIGRFAM: conserved hypothetical protein TIGR00481
YP_003680817.1	KEGG: tfu:Tfu_1951 hypothetical protein; SPTR: C1YW08  uncharacterized protein
YP_003680818.1	COGs: COG0659 sulfate permease and related transporter (MFS superfamily); InterPro IPR015892:IPR011547:IPR001765:IPR002645; KEGG: sro:Sros_6793 carbonate dehydratase; PFAM: carbonic anhydrase; sulfate transporter; PRIAM: carbonate dehydratase; SPTR: C1YW07 sulfate permease-like transporter MFS superfamily; PFAM: sulfate transporter family; carbonic anhydrase
YP_003680819.1	KEGG: tfu:Tfu_1952 hypothetical protein; SPTR: Q47NI4  uncharacterized protein
YP_003680820.1	COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: tcu:Tcur_1674 protein of unknown function DUF164; PFAM: protein of unknown function DUF164; SPTR: C1YW05 Zn-ribbon protein, possibly nucleic acid-binding; PFAM:  zinc ribbon domain
YP_003680821.1	COGs: COG0327 conserved hypothetical protein; InterPro IPR002678; KEGG: tfu:Tfu_1955 hypothetical protein; PFAM: protein of unknown function DUF34; SPTR: C1YW04  uncharacterized protein; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: conserved hypothetical protein TIGR00486
YP_003680822.1	COGs: COG2378 transcriptional regulator protein; InterPro IPR001034:IPR013196:IPR018356; KEGG: sen:SACE_7244 DeoR family transcriptional regulator; PFAM: hypothetical protein; SPTR: C1YW03 Predicted transcriptional regulator, COG2378; PFAM: HTH domain
YP_003680823.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR016166:IPR016167:IPR006094:IPR012951; KEGG: sen:SACE_7243 FAD-dependent oxygenase; PFAM: FAD linked oxidase; Berberine/berberine domain protein; SPTR: C1YW02 FAD/FMN-dependent dehydrogenase; PFAM: Berberine and berberine like; FAD binding domain
YP_003680824.1	COGs: COG0648 endonuclease IV; InterPro IPR001719:IPR018246:IPR013022:IPR012307; KEGG: tfu:Tfu_1956 endonuclease IV; PFAM: xylose isomerase; PRIAM: deoxyribonuclease IV (phage-T(4)-induced); SMART: AP endonuclease family 2; SPTR: C1YW01 endonuclease IV; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1)
YP_003680825.1	InterPro IPR001845:IPR011991; KEGG: sro:Sros_7390 hypothetical protein; SMART: regulatory protein ArsR; SPTR: C1YW00 ArsR family transcriptional regulator
YP_003680826.1	InterPro IPR011701:IPR016196; KEGG: stp:Strop_4165 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YVZ9 Major Facilitator Superfamily transporter; PFAM: Bacterial protein of unknown function (DUF894)
YP_003680827.1	KEGG: tfu:Tfu_1957 hypothetical protein; SPTR: C1YVZ8  uncharacterized protein
YP_003680828.1	COGs: COG2183 transcriptional accessory protein; InterProIPR006641:IPR012340:IPR003029:IPR018974:IPR 016027; KEGG: sro:Sros_7595 RNA binding S1 domain protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; SPTR: C1YVZ7 transcriptional accessory protein (Fragment); PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region
YP_003680829.1	COGs: COG2936 acyl esterase; InterPro IPR008979:IPR005674:IPR000383:IPR013736; KEGG: sen:SACE_4152 peptidase S15; PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; SPTR: C1YS31  hydrolase, CocE/NonD family; TIGRFAM: hydrolase CocE/NonD family protein; PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM:  hydrolase, CocE/NonD family
YP_003680830.1	InterPro IPR011761; KEGG: svi:Svir_08450 hypothetical protein; SPTR: C1YS30  uncharacterized protein; PFAM: carbamoyl-phosphate synthase L chain, ATP binding domain
YP_003680831.1	COGs: COG2272 carboxylesterase type B; InterPro IPR002018:IPR019826; KEGG: sro:Sros_5611 carboxylesterase; PFAM: carboxylesterase type B; PRIAM: carboxylesterase; SPTR: C1YS29 carboxylesterase type B; PFAM: carboxylesterase
YP_003680832.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR016040:IPR013149:IPR011032:IPR013154; KEGG: tcu:Tcur_2092 alcohol dehydrogenase zinc-binding domain protein; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; SPTR: C1YS28 Zn-dependent oxidoreductase, NADPH:quinone reductase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003680833.1	COGs: COG2388 acetyltransferase; InterPro IPR000182:IPR016181; KEGG: sgr:SGR_3112 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YS27 Predicted acetyltransferase, COG2388; PFAM: acetyltransferase (GNAT) family
YP_003680834.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: nfa:nfa34120 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YS26  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003680835.1	COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR016040:IPR002198:IPR002347; KEGG: svi:Svir_16720 short-chain dehydrogenase of unknown substrate specificity; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YS25  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003680836.1	COGs: COG3173 aminoglycoside phosphotransferase; InterPro IPR002575:IPR011009:IPR008266; KEGG: sma:SAV_6615 phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: C1YS24 Predicted aminoglycoside phosphotransferase; PFAM: phosphotransferase enzyme family
YP_003680837.1	COGs: COG1960 acyl-CoA dehydrogenase; InterProIPR013786:IPR006091:IPR009100:IPR006090:IPR 006092:IPR009075:IPR013764; KEGG: svi:Svir_16760 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: C1YS23 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain
YP_003680838.1	COGs: COG1309 transcriptional regulator; InterProIPR001647:IPR012287:IPR015893:IPR011075:IPR 009057; KEGG: sro:Sros_7768  TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YS22 transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003680839.1	COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterPro IPR003607:IPR006674; KEGG: tfu:Tfu_1551 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: C1YS21 Guanosine polyphosphate synthetase/pyrophosphohydrolase; PFAM: HD domain
YP_003680840.1	InterPro IPR004360; KEGG: sro:Sros_4542 glyoxalase family protein; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YS20 glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003680841.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sro:Sros_4543  TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YS19 transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003680842.1	InterPro IPR011991; KEGG: bcv:Bcav_3656 regulatory protein, MarR; SPTR: C1YS18 Predicted transcriptional regulator; PFAM: Sugar-specific transcriptional regulator TrmB
YP_003680843.1	COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; InterPro IPR003593:IPR003439:IPR017871; KEGG: tfu:Tfu_1494 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YS17 ABC-type cobalamin/Fe3+-siderophore transporter ATPase component; PFAM: ABC transporter
YP_003680844.1	COGs: COG4779 ABC-type enterobactin transporter permease; InterPro IPR000522; KEGG: tfu:Tfu_1493  ferrichrome transporter permease; PFAM: transporter permease protein; SPTR: C1YS16 ABC-type enterobactin transporter permease component; PFAM: FecCD transport family
YP_003680845.1	COGs: COG0609 ABC-type Fe3+-siderophore transporter permease; InterPro IPR000522; KEGG: tfu:Tfu_1492  ferrichrome transporter permease; PFAM: transporter permease protein; SPTR: C1YS15 ABC-type Fe3+-siderophore transporter permease component; PFAM: FecCD transport family
YP_003680846.1	COGs: COG0614 ABC-type Fe3+-hydroxamate transporter periplasmic component; InterPro IPR002491:IPR019756; KEGG: tfu:Tfu_1491  ABC transporter periplasmic iron-siderophore binding protein; PFAM: periplasmic binding protein; SPTR: C1YS14 ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein
YP_003680847.1	KEGG: sen:SACE_6635 hypothetical protein; SPTR: C1YS13  uncharacterized protein
YP_003680848.1	COGs: COG0366 glycosidase; InterProIPR006589:IPR013781:IPR013780:IPR006047:IPR 017853; KEGG: nml:Namu_4926 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: C1YS12 glycosidase; PFAM: alpha amylase, catalytic domain
YP_003680849.1	COGs: COG1878 metal-dependent hydrolase; InterPro IPR007325; KEGG: rrs:RoseRS_1211 cyclase family protein; PFAM: cyclase family protein; SPTR: C1YS11 Predicted metal-dependent hydrolase, COG1878; PFAM:  cyclase
YP_003680850.1	COGs: COG2208 serine phosphatase RsbU regulator of sigma subunit; InterPro IPR010822:IPR001932; KEGG: sco:SCO7380 hypothetical protein; PFAM: stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; SPTR: C1YS10 stage II sporulation protein E (SpoIIE); PFAM: stage II sporulation protein E (SpoIIE)
YP_003680851.1	COGs: COG1219 ATP-dependent protease Clp ATPase subunit; InterProIPR003593:IPR010603:IPR013093:IPR019489:IPR 004487; KEGG: tfu:Tfu_2192 ATP-dependent protease ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; Clp ATPase-like; SMART: ATPase AAA; SPTR: C1YS09 ATP-dependent Clp protease ATP-binding subunit ClpX; TIGRFAM: ATP-dependent Clp protease ATP-binding subunit ClpX; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX)
YP_003680852.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR003593:IPR011704; KEGG: dhd:Dhaf_1910 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; SPTR: C1YS08 ATPase family protein associated with various cellular activities (AAA); PFAM: AAA domain (dynein-related subfamily)
YP_003680853.1	COGs: COG3864 conserved hypothetical protein; KEGG: sco:SCO1305 hypothetical protein; SPTR: C0E208  uncharacterized protein; PFAM: Predicted metallopeptidase (DUF2201)
YP_003680854.1	KEGG: hypothetical protein; SPTR: C1YS05  uncharacterized protein
YP_003680855.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sro:Sros_3550  TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YS04 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003680856.1	KEGG: nfa:nfa17310 hypothetical protein; SPTR: C1YS03  uncharacterized protein
YP_003680857.1	COGs: COG3866 pectate lyase; InterPro IPR002022:IPR012334:IPR011050:IPR008979; KEGG: tfu:Tfu_2168 pectate lyase; PFAM: pectate lyase/Amb allergen; SMART: pectate lyase/Amb allergen; SPTR: C1YS02 pectate lyase; PFAM: pectate lyase
YP_003680858.1	InterPro IPR000772:IPR008997:IPR005193; KEGG: ami:Amir_4966 alpha-N-arabinofuranosidase; PFAM: glycoside hydrolase family 62; ricin B lectin; PRIAM: alpha-N-arabinofuranosidase; SMART: ricin B lectin; SPTR: C1YS01 glycosyl hydrolase family 62; PFAM: ricin-type beta-trefoil lectin domain; glycosyl hydrolase family 62
YP_003680859.1	COGs: COG1225 peroxiredoxin; InterPro IPR017936:IPR012336:IPR000866:IPR012335; KEGG: sro:Sros_7040 peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; SPTR: C1YS00 peroxiredoxin; PFAM: AhpC/TSA family
YP_003680860.1	KEGG: tfu:Tfu_1965 hypothetical protein; SPTR: C1YRZ9  uncharacterized protein; PFAM: protein of unknown function (DUF3052)
YP_003680861.1	COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: tfu:Tfu_1966 hypothetical protein; PFAM: protein of unknown function UPF0047; SPTR: C1YRZ8  uncharacterized protein; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: conserved hypothetical protein TIGR00149
YP_003680862.1	KEGG: tfu:Tfu_1967 hypothetical protein; SPTR: C1YRZ7  uncharacterized protein; PFAM: PhoD-like phosphatase
YP_003680863.1	KEGG: tfu:Tfu_1971 hypothetical protein; SPTR: C1YRZ6  uncharacterized protein
YP_003680864.1	COGs: COG2508 Regulator of polyketide synthase expression; KEGG: tfu:Tfu_1972 hypothetical protein; SPTR: C1YRZ5 CdaR family transcriptional regulator family
YP_003680865.1	COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR001227:IPR014043:IPR016035:IPR016036; KEGG: tfu:Tfu_1973 acyl-carrier-protein S-malonyltransferase; PFAM: acyl transferase; SPTR: C1YRZ4 (acyl-carrier-protein) S-malonyltransferase; PFAM: acyl transferase domain
YP_003680866.1	COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterProIPR013747:IPR016039:IPR004655:IPR016038:IPR 013751; KEGG: tfu:Tfu_1974 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; PRIAM: beta-ketoacyl-acyl-carrier-protein synthase III; SPTR: C1YRZ3 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_003680867.1	InterPro IPR006163:IPR009081; KEGG: tfu:Tfu_1975 acyl carrier protein; PFAM: phosphopantetheine-binding; SPTR: C1YRZ2 acyl carrier protein; PFAM: phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_003680868.1	COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterProIPR016039:IPR014031:IPR017568:IPR016038:IPR 014030; KEGG: tfu:Tfu_1976 3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: beta-ketoacyl synthase; SPTR: C1YRZ1 3-oxoacyl-(acyl-carrier-protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase, N-terminal domain; beta-ketoacyl synthase, C-terminal domain; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2
YP_003680869.1	COGs: COG2200 FOG: EAL domain; InterPro IPR000644:IPR001633; KEGG: tfu:Tfu_1977 EAL domain-containing protein; PFAM: EAL domain protein; SPTR: C1YRZ0 EAL domain-containing protein; PFAM: EAL domain
YP_003680870.1	COGs: COG2755 lysophospholipase L1 and related esterase; InterPro IPR013831:IPR001087:IPR013830; KEGG: tfu:Tfu_1978 hypothetical protein; PFAM: lipolytic protein G-D-S-L family; SPTR: C1YRY9 lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/acylhydrolase
YP_003680871.1	KEGG: tfu:Tfu_1979 hypothetical protein; SPTR: C1YRY8  uncharacterized protein
YP_003680872.1	KEGG: dge:Dgeo_2663 binding-protein-dependent transport systems inner membrane component; SPTR: C1YRY7  uncharacterized protein
YP_003680873.1	COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744; KEGG: tfu:Tfu_1981 hypothetical protein; PFAM: protein of unknown function DUF59; SPTR: C1YRY6 Predicted metal-sulfur cluster biosynthetic enzyme; PFAM: Domain of unknown function DUF59
YP_003680874.1	COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR011341:IPR002871; KEGG: tfu:Tfu_1982 SUF system FeS assembly protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: C1YRY5 SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family
YP_003680875.1	COGs: COG0520 Selenocysteine lyase; InterProIPR020578:IPR015424:IPR010970:IPR000192:IPR 015421; KEGG: tfu:Tfu_1983 cysteine desulfurase; PFAM: aminotransferase class V; SPTR: C1YRY4 Cysteine desulfurase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily
YP_003680876.1	COGs: COG0396 ABC-type transporter involved in Fe-S cluster assembly ATPase component; InterPro IPR010230:IPR003593:IPR003439; KEGG: tfu:Tfu_1984 iron-regulated ABC transporter ATPase SufC; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YRY3 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC
YP_003680877.1	COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941; KEGG: tfu:Tfu_1985  dioxygenase; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: C1YRY2 Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase; PFAM: Rieske [2Fe-2S] domain
YP_003680878.1	COGs: COG0719 ABC-type transporter involved in Fe-S cluster assembly permease; InterPro IPR000825:IPR011542; KEGG: tfu:Tfu_1986 iron-regulated ABC transporter permease SufD; PFAM: SufBD protein; SPTR: C1YRY1 Iron-regulated ABC transporter permease SufD; TIGRFAM: FeS assembly protein SufD; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD, group 1
YP_003680879.1	COGs: COG0719 ABC-type transporter involved in Fe-S cluster assembly permease; InterPro IPR010231:IPR000825; KEGG: tfu:Tfu_1987 iron-regulated ABC transporter membrane component SufB; PFAM: SufBD protein; SPTR: C1YRY0 Iron-regulated ABC transporter membrane component SufB; TIGRFAM: FeS assembly protein SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB
YP_003680880.1	COGs: COG2345 transcriptional regulator protein; InterPro IPR001845; KEGG: tfu:Tfu_1988 transcriptional regulator; PFAM: regulatory protein ArsR; SPTR: C1YRX9 transcriptional regulator; PFAM: HTH domain
YP_003680881.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: tfu:Tfu_1989 ABC-type multidrug transporter ATPase componen; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YRX8 ABC-type multidrug transporter ATPase component; PFAM: ABC transporter
YP_003680882.1	COGs: COG0842 ABC-type multidrug transporter permease; InterPro IPR000412:IPR013525; KEGG: tfu:Tfu_1990  integral membrane transporter; PFAM: ABC transporter; SPTR: C1YRX7 ABC-type multidrug transporter permease; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family
YP_003680883.1	InterPro IPR000772:IPR008997; KEGG: ami:Amir_4966 alpha-N-arabinofuranosidase; PFAM: ricin B lectin; SMART: ricin B lectin; SPTR: C1YRX6  carbohydrate-binding protein; PFAM: ricin-type beta-trefoil lectin domain
YP_003680884.1	KEGG: tfu:Tfu_1991 hypothetical protein; SPTR: C1YRX5  uncharacterized protein
YP_003680885.1	COGs: COG5006 permease DMT superfamily protein; InterPro IPR000620; KEGG: tfu:Tfu_1994  integral membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C1YRX4 Predicted permease, DMT superfamily; PFAM: EamA-like transporter family
YP_003680886.1	KEGG: sse:Ssed_0237 arylsulfate sulfotransferase; SPTR: C1YRX3  uncharacterized protein
YP_003680887.1	COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly; InterPro IPR003780; KEGG: tfu:Tfu_1995  integral membrane transporter; PFAM: cytochrome oxidase assembly; SPTR: C1YRX2 Uncharacterized protein required for cytochrome oxidase assembly; PFAM: cytochrome oxidase assembly protein
YP_003680888.1	COGs: COG2339 membrane protein; KEGG: tfu:Tfu_1996  integral membrane protein; SPTR: C1YRX1 Predicted membrane protein, COG2339
YP_003680889.1	COGs: COG0109 polyprenyltransferase (cytochrome oxidase assembly factor); InterPro IPR006369:IPR000537; KEGG: tfu:Tfu_2001 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; SPTR: C1YRX0 Protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase
YP_003680890.1	COGs: COG0021 transketolase; InterProIPR015941:IPR005474:IPR005475:IPR005476:IPR 009014:IPR005478; KEGG: tfu:Tfu_2002 transketolase; PFAM: transketolase domain protein; transketolase; SPTR: C1YRW9 transketolase; TIGRFAM: transketolase; PFAM: transketolase, thiamine diphosphate binding domain; transketolase, C-terminal domain; transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast
YP_003680891.1	COGs: COG0176 transaldolase; InterProIPR018225:IPR014634:IPR001585:IPR013785:IPR 004732; KEGG: tfu:Tfu_2003 transaldolase; PFAM: transaldolase; SPTR: C1YRW8 transaldolase; TIGRFAM: transaldolase; PFAM: transaldolase; TIGRFAM: transaldolase, mycobacterial type
YP_003680892.1	COGs: COG0364 glucose-6-phosphate 1-dehydrogenase; InterPro IPR001282:IPR016040:IPR019796; KEGG: tfu:Tfu_2005 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; PRIAM: glucose-6-phosphate dehydrogenase; SPTR: C1YRW7 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase, C-terminal domain; glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase
YP_003680893.1	COGs: COG3429 glucose-6-P dehydrogenase subunit; InterPro IPR019297; KEGG: tfu:Tfu_2006 hypothetical protein; PFAM: glucose-6-phosphate dehydrogenase subunit; SPTR: C1YRW5 glucose-6-P dehydrogenase subunit; PFAM: glucose-6-phosphate dehydrogenase subunit; TIGRFAM: opcA protein
YP_003680894.1	COGs: COG0363 6-phosphogluconolactonase/glucosamine-6-phosphate isomerase/deaminase; InterPro IPR006148:IPR005900; KEGG: tfu:Tfu_2007 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; SPTR: C1YRW4 6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase
YP_003680895.1	COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterProIPR013221:IPR004101:IPR000713:IPR005761:IPR 018109; KEGG: sgr:SGR_186  UDP-N-acetylmuramyl tripeptide synthase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: C1YRW3 UDP-N-acetylmuramyl-tripeptide synthetase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetases
YP_003680896.1	InterPro IPR000073:IPR013595; KEGG: tfu:Tfu_2780 tripeptidyl-peptidase B; PFAM: TAP domain protein; alpha/beta hydrolase fold; SPTR: C1YRW1 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: TAP-like protein; alpha/beta hydrolase fold
YP_003680897.1	InterPro IPR018130; KEGG: chl:Chy400_2479 hypothetical protein; SPTR: C1YRW0  uncharacterized protein
YP_003680898.1	KEGG: aac:Aaci_3152 hypothetical protein; SPTR: C1YRV9  uncharacterized protein
YP_003680899.1	KEGG: acp:A2cp1_4152 OmpA/MotB domain protein; SPTR: C1YRV8  uncharacterized protein
YP_003680900.1	KEGG: ate:Athe_0140 protein of unknown function DUF324; SPTR: C1YRV7  uncharacterized protein; PFAM: RAMP superfamily
YP_003680901.1	KEGG: LRP12; low density lipoprotein-related protein 12; SPTR: C1YRV6  uncharacterized protein
YP_003680902.1	InterPro IPR005537; KEGG: chl:Chy400_2448 protein of unknown function DUF324; PFAM: protein of unknown function DUF324; SPTR: C1YRV5 Uncharacterized RAMP superfamily protein probably involved in DNA repair; PFAM: RAMP superfamily
YP_003680903.1	KEGG: mav:MAV_4148 helicase, UvrD/Rep family protein; SPTR: C1YRV4  uncharacterized protein
YP_003680904.1	KEGG: chl:Chy400_2446 hypothetical protein; SPTR: C1YRV3  uncharacterized protein
YP_003680905.1	KEGG: hau:Haur_1915 hypothetical protein; SPTR: C1YRV2  uncharacterized protein
YP_003680906.1	KEGG: krh:KRH_14260 hypothetical protein; SPTR: C1YRV1  uncharacterized protein
YP_003680907.1	KEGG: sco:SCO2351 integral membrane protein; SPTR: C1YRV0  uncharacterized protein
YP_003680908.1	COGs: COG3797 conserved hypothetical protein; InterPro IPR012545; KEGG: sma:SAV_2140 hypothetical protein; PFAM: protein of unknown function DUF1697; SPTR: C1YRU9 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF1697)
YP_003680909.1	KEGG: sco:SCO0593 hypothetical protein; SPTR: C1YRU8  uncharacterized protein
YP_003680910.1	COGs: COG4147 symporter; InterPro IPR001734; KEGG: saq:Sare_5018 SSS family solute/sodium (Na+) symporter; PFAM: Na+/solute symporter; SPTR: C1YRU7 Predicted symporter; PFAM: Sodium:solute symporter family; TIGRFAM: SSS sodium solute transporter superfamily
YP_003680911.1	COGs: COG3162 membrane protein; InterPro IPR007436; KEGG: sro:Sros_6315 membrane protein-like protein; PFAM: protein of unknown function DUF485; SPTR: C1YRU6 Predicted membrane protein; PFAM: protein of unknown function, DUF485
YP_003680912.1	KEGG: tfu:Tfu_2010 hypothetical protein; SPTR: C1YRU5  uncharacterized protein
YP_003680913.1	COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680:IPR011059:IPR005920; KEGG: tcu:Tcur_3615 imidazolonepropionase; PFAM: amidohydrolase; PRIAM: Imidazolonepropionase; SPTR: C1YRU4 Imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase
YP_003680914.1	COGs: COG0402 cytosine deaminase and related metal-dependent hydrolase; InterPro IPR010252:IPR006680:IPR011059; KEGG: sen:SACE_6404 N-formimino-L-glutamate deiminase; PFAM: amidohydrolase; PRIAM: S-adenosylhomocysteine deaminase; SPTR: C1YRU2 Formiminoglutamate deiminase; TIGRFAM: formiminoglutamate deiminase; PFAM: Amidohydrolase family; TIGRFAM: formiminoglutamate deiminase
YP_003680915.1	COGs: COG0624 acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR010158:IPR002933:IPR011650; KEGG: tfu:Tfu_2012 allantoate amidohydrolase; PFAM: peptidase M20; PRIAM: N-carbamoyl-L-amino-acid hydrolase; SPTR: C1YRU1 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase family M20/M25/M40; TIGRFAM: amidase, hydantoinase/carbamoylase family
YP_003680916.1	COGs: COG2987 Urocanate hydratase; InterPro IPR000193; KEGG: sco:SCO3073 urocanate hydratase; PFAM: Urocanase; PRIAM: Urocanate hydratase; SPTR: C1YRU0 Urocanate hydratase; TIGRFAM: urocanate hydratase; PFAM: Urocanase; TIGRFAM: urocanate hydratase
YP_003680917.1	COGs: COG2986 histidine ammonia-lyase; InterPro IPR001106:IPR008948:IPR005921; KEGG: tcu:Tcur_3619 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; PRIAM: histidine ammonia-lyase; SPTR: C1YRT9 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase
YP_003680918.1	COGs: COG1414 transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: tcu:Tcur_3621 IclR family transcriptional regulator; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; SPTR: C1YRT8 IclR family transcriptional regulator; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_003680919.1	KEGG: nfa:nfa10200  transcriptional regulator; SPTR: C1YRT7  uncharacterized protein
YP_003680920.1	KEGG: hypothetical protein; SPTR: C1YRT6  uncharacterized protein
YP_003680922.1	InterPro IPR018527; KEGG: tfu:Tfu_2013  electron transporter; SPTR: C1YRT5  uncharacterized protein
YP_003680923.1	InterPro IPR004692; KEGG: tfu:Tfu_2014 preprotein translocase subunit SecG; PFAM: Preprotein translocase SecG subunit; SPTR: C1YRT4 protein translocase subunit secG; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit
YP_003680924.1	COGs: COG0149 triosephosphate isomerase; InterPro IPR000652:IPR020861:IPR013785; KEGG: sgr:SGR_5575 triosephosphate isomerase; PFAM: triosephosphate isomerase; SPTR: C1YRT3 triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; TIGRFAM: triosephosphate isomerase
YP_003680925.1	COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR001576:IPR015901:IPR015911:IPR015824; KEGG: tfu:Tfu_2016 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; PRIAM: phosphoglycerate kinase; SPTR: C1YRT2 phosphoglycerate kinase; PFAM: phosphoglycerate kinase
YP_003680926.1	COGs: COG0057 glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterProIPR020831:IPR020832:IPR020828:IPR020829:IPR 016040:IPR006424; KEGG: tfu:Tfu_2017 glyceraldehyde-3-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: C1YRT1 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase
YP_003680927.1	COGs: COG1481 conserved hypothetical protein; InterPro IPR003802:IPR018478; KEGG: tfu:Tfu_2018 hypothetical protein; PFAM: protein of unknown function DUF199; sporulation regulator WhiA-like; SPTR: C1YRT0  uncharacterized protein; PFAM: sporulation Regulator WhiA N terminal; sporulation Regulator WhiA C terminal domain; TIGRFAM: conserved hypothetical protein
YP_003680928.1	COGs: COG0391 conserved hypothetical protein; InterPro IPR002882:IPR010119; KEGG: tfu:Tfu_2019 hypothetical protein; PFAM: protein of unknown function UPF0052 and CofD; SPTR: C1YRS9  uncharacterized protein; PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related
YP_003680929.1	COGs: COG1660 P-loop-containing kinase; InterPro IPR005337; KEGG: tfu:Tfu_2020 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C1YRS8 Predicted P-loop-containing kinase; PFAM: P-loop ATPase protein family
YP_003680930.1	COGs: COG0322 Nuclease subunit of the excinuclease complex; InterProIPR000305:IPR003583:IPR001943:IPR001162:IPR 000445:IPR010994:IPR009055:IPR004791; KEGG: tfu:Tfu_2021 excinuclease ABC subunit C; PFAM: excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; helix-hairpin-helix motif; SMART: excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1; SPTR: C1YRS7 excinuclease ABC subunit C; TIGRFAM: excinuclease ABC, C subunit; PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; Helix-hairpin-helix motif; TIGRFAM: excinuclease ABC, C subunit
YP_003680931.1	COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685:IPR010920; KEGG: tfu:Tfu_2022 small-conductance mechanosensitive channel; PFAM: MscS Mechanosensitive ion channel; SPTR: C1YRS6 Small-conductance mechanosensitive channel; PFAM: Mechanosensitive ion channel
YP_003680932.1	COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941:IPR005805:IPR006311; KEGG: tfu:Tfu_2023  iron-sulphur protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: C1YRS5 Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase; PFAM: Rieske [2Fe-2S] domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003680933.1	InterPro IPR010432; KEGG: sro:Sros_9150 membrane protein/domain-like protein; PFAM: RDD domain containing protein; SPTR: C1YRS4 Uncharacterized conserved protein; PFAM: RDD family
YP_003680934.1	COGs: COG0178 excinuclease ATPase; InterPro IPR003593:IPR003439:IPR004602:IPR017871; KEGG: tfu:Tfu_2024 excinuclease ABC subunit A; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YRS3 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter; TIGRFAM: excinuclease ABC subunit A
YP_003680935.1	COGs: COG0861 membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: tfu:Tfu_2025  transporter membrane protein; PFAM: integral membrane protein TerC; SPTR: C1YRS2 membrane protein TerC, possibly involved in tellurium resistance; PFAM: integral membrane protein TerC family
YP_003680936.1	COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: tfu:Tfu_2026  glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: C1YRS1 glycosyltransferase (Fragment); PFAM: glycosyl transferases group 1
YP_003680937.1	COGs: COG0728 membrane protein  virulence factor; InterPro IPR004268; KEGG: tfu:Tfu_2027 hypothetical protein; PFAM: virulence factor MVIN family protein; SPTR: C1YW81 Uncharacterized membrane protein,  virulence factor (Fragment); PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN
YP_003680938.1	KEGG: tfu:Tfu_2028 hypothetical protein; SPTR: C1YW80  uncharacterized protein
YP_003680939.1	KEGG: tfu:Tfu_2029 hypothetical protein; SPTR: C1YW79  uncharacterized protein; PFAM: protein of unknown function (DUF3186)
YP_003680940.1	COGs: COG4825 Uncharacterized membrane-anchored protein; InterPro IPR007371; KEGG: tcu:Tcur_2172 thiamin pyrophosphokinase catalytic region; PFAM: Thiamin pyrophosphokinase catalytic region; SPTR: C1YW78 Uncharacterized membrane-anchored protein; PFAM: thiamine pyrophosphokinase C terminal; Thiamin pyrophosphokinase, catalytic domain
YP_003680941.1	COGs: COG0497 ATPase involved in DNA repair; InterPro IPR003395:IPR004604; KEGG: tfu:Tfu_2032 DNA repair protein RecN; PFAM: SMC domain protein; SPTR: C1YW76 DNA replication and repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN
YP_003680942.1	COGs: COG0061 sugar kinase; InterPro IPR017438:IPR017437:IPR016064:IPR002504; KEGG: tfu:Tfu_2033 inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD/AcoX kinase; SPTR: C1YW75 Predicted sugar kinase, COG0061; PFAM: ATP-NAD kinase
YP_003680943.1	COGs: COG1189 rRNA methylase; InterPro IPR002942:IPR004538:IPR002877; KEGG: tfu:Tfu_2034 hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein; SPTR: C1YW74 Hemolysin A; TIGRFAM: hemolysin A; PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein
YP_003680944.1	KEGG: tfu:Tfu_2035 hypothetical protein; SPTR: C1YW73  uncharacterized protein
YP_003680945.1	KEGG: tfu:Tfu_2036 hypothetical protein; SPTR: C1YW72  uncharacterized protein
YP_003680946.1	InterPro IPR016083; KEGG: tfu:Tfu_2037 hypothetical protein; SPTR: C1YW71  uncharacterized protein; PFAM: SCP-2 sterol transfer family
YP_003680947.1	COGs: COG4198 conserved hypothetical protein; InterPro IPR008323; KEGG: tcu:Tcur_2164 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C1YW70 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF1015)
YP_003680948.1	COGs: COG1680 beta-lactamase class C and other penicillin binding protein; InterPro IPR001466:IPR012338; KEGG: sro:Sros_8721 beta-lactamase class C and other penicillin binding protein-like protein; PFAM: beta-lactamase; SPTR: C1YW69 Penicillin-binding protein, beta-lactamase class C; PFAM: beta-lactamase
YP_003680949.1	COGs: COG2746 aminoglycoside N3'-acetyltransferase; InterPro IPR003679; KEGG: bcv:Bcav_0391 aminoglycoside N(3')-acetyltransferase; PFAM: aminoglycoside 3-N-acetyltransferase; PRIAM: aminoglycoside N(3')-acetyltransferase; SPTR: C1YW68 aminoglycoside N3'-acetyltransferase; PFAM: aminoglycoside 3-N-acetyltransferase
YP_003680950.1	COGs: COG0647 sugar phosphatase of the HAD superfamily; InterPro IPR006357:IPR005834; KEGG: tfu:Tfu_2038 HAD family hydrolase; PFAM: haloacid dehalogenase; SPTR: C1YW67 Predicted sugar phosphatase of HAD superfamily; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; TIGRFAM: Haloacid Dehalogenase Superfamily class (subfamily) IIA
YP_003680951.1	InterPro IPR000424:IPR012340:IPR016027; KEGG: tfu:Tfu_2039 hypothetical protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: C1YW66 Single-stranded DNA-binding protein; PFAM: Single-strand binding protein family
YP_003680952.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: tfu:Tfu_2040 Zn-dependent hydrolase; SPTR: C1YW65 Zn-dependent hydrolase, glyoxylase; PFAM: metallo-beta-lactamase superfamily
YP_003680953.1	InterPro IPR000182:IPR016181; KEGG: sma:SAV_6566 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YW64 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003680954.1	InterPro IPR000086:IPR015797:IPR020084; KEGG: tfu:Tfu_2041 8-oxo-dGTPase; PFAM: NUDIX hydrolase; SPTR: C1YW63 ADP-ribose pyrophosphatase; PFAM: NUDIX domain
YP_003680955.1	InterPro IPR013026; KEGG: tfu:Tfu_2042 hypothetical protein; SPTR: C1YW62  uncharacterized protein
YP_003680956.1	COGs: COG0162 Tyrosyl-tRNA synthetase; InterProIPR002942:IPR014729:IPR002307:IPR002305:IPR 001412; KEGG: tfu:Tfu_2043 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; PRIAM: Tyrosine--tRNA ligase; SMART: RNA-binding S4 domain protein; SPTR: C1YVG4 Tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase
YP_003680957.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639:IPR000073; KEGG: bcv:Bcav_0715 alpha/beta hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YVG3 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003680958.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: ami:Amir_4461 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YVG2 transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003680959.1	KEGG: bcq:BCQ_4820 hypothetical protein; SPTR: C1YVG1  uncharacterized protein
YP_003680960.1	InterPro IPR018532; KEGG: svi:Svir_38220 protein of unknown function (DUF1994); PFAM: Domain of unknown function DUF1994; SPTR: C1YVG0  uncharacterized protein; PFAM: Domain of unknown function (DUF1994)
YP_003680961.1	KEGG: psb:Psyr_1632 ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2; SPTR: C1YVF9  uncharacterized protein
YP_003680962.1	COGs: COG0579 dehydrogenase; InterPro IPR006076; KEGG: sro:Sros_8880 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: C1YVF8 Predicted dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_003680963.1	InterPro IPR007995; KEGG: tfu:Tfu_2044 hypothetical protein; PFAM: protein of unknown function DUF742; SPTR: C1YVF7  uncharacterized protein; PFAM: protein of unknown function (DUF742)
YP_003680964.1	InterPro IPR003594:IPR003660; KEGG: tfu:Tfu_2045 ATP-binding region, ATPase-like; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YVF6 HAMP domain-containing histidine kinase; PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; nitrate and nitrite sensing
YP_003680965.1	InterPro IPR002762; KEGG: tfu:Tfu_2046 hypothetical protein; PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; SPTR: C1YVF5 CbiX protein; PFAM: CbiX
YP_003680967.1	COGs: COG2229 GTPase; InterPro IPR004130; KEGG: tfu:Tfu_2447  ATP/GTP-binding protein; PFAM: protein of unknown function ATP binding; SPTR: C1YVF4 Predicted GTPase, COG2229; PFAM: Conserved hypothetical ATP binding protein
YP_003680968.1	InterPro IPR007995; KEGG: tfu:Tfu_2048 hypothetical protein; PFAM: protein of unknown function DUF742; SPTR: C1YVF3  uncharacterized protein; PFAM: protein of unknown function (DUF742)
YP_003680969.1	COGs: COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid; InterPro IPR004942; KEGG: tfu:Tfu_2049 hypothetical protein; PFAM: Roadblock/LC7 family protein; SPTR: C1YVF2 Uncharacterized conserved protein; PFAM: Roadblock/LC7 domain
YP_003680970.1	InterPro IPR003594:IPR003660:IPR013587; KEGG: tfu:Tfu_2050 ATP-binding region, ATPase-like; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; nitrate and nitrite sensing domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YVF1 Signal transduction histidine kinase, COG0642; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; nitrate and nitrite sensing
YP_003680971.1	COGs: COG0165 Argininosuccinate lyase; InterProIPR000362:IPR008948:IPR020557:IPR003031:IPR 009049; KEGG: tfu:Tfu_2051 argininosuccinate lyase; PFAM: fumarate lyase; SPTR: C1YVF0 Argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: Lyase; TIGRFAM: argininosuccinate lyase
YP_003680972.1	COGs: COG1438 Arginine repressor; InterPro IPR001669:IPR011991; KEGG: tfu:Tfu_2053 arginine repressor; PFAM: arginine repressor; SPTR: C1YVE9 ArgR family transcriptional regulator; TIGRFAM: arginine repressor; PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor
YP_003680973.1	COGs: COG0078 ornithine carbamoyltransferase; InterPro IPR006132:IPR006131:IPR006130:IPR002292; KEGG: tcu:Tcur_2155 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; SPTR: C1YVE8 ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase
YP_003680974.1	COGs: COG4992 ornithine/acetylornithine aminotransferase; InterPro IPR005814:IPR015421:IPR015424:IPR004636; KEGG: tfu:Tfu_2054 acetylornithine aminotransferase; PFAM: aminotransferase class-III; SPTR: C1YVE7 acetylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases
YP_003680975.1	COGs: COG0548 acetylglutamate kinase; InterPro IPR004662:IPR001048:IPR001057:IPR011148; KEGG: tfu:Tfu_2055 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: C1YVE6 N-acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: amino acid kinase family; TIGRFAM: acetylglutamate kinase
YP_003680976.1	COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); InterPro IPR002813:IPR016117; KEGG: tcu:Tcur_2152 arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; PRIAM: amino-acid N-acetyltransferase; SPTR: C1YVE5 N-acetylglutamate synthase (N-acetylornithine aminotransferase); PFAM: ArgJ family
YP_003680977.1	COGs: COG0002 acetylglutamate semialdehyde dehydrogenase; InterPro IPR000706:IPR016040:IPR000534:IPR012280; KEGG: tfu:Tfu_2057 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: semialdehyde dehydrogenase dimerisation region; semialdehyde dehydrogenase NAD - binding; PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase; SMART: semialdehyde dehydrogenase NAD - binding; SPTR: C1YVE4 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: semialdehyde dehydrogenase, dimerisation domain; semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form
YP_003680978.1	COGs: COG0665 glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: tfu:Tfu_2058 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: C1YVE3 glycine/D-amino acid oxidase deaminating; PFAM: FAD dependent oxidoreductase
YP_003680979.1	InterPro IPR000835:IPR011991; KEGG: tfu:Tfu_2059 regulatory protein, MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YVE2 transcriptional regulator; PFAM: MarR family
YP_003680980.1	COGs: COG0161 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR015424:IPR005814:IPR015421; KEGG: sen:SACE_3329 adenosylmethionine-8-amino-7-oxononanoate transaminase; PFAM: aminotransferase class-III; SPTR: C1YVE1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III
YP_003680981.1	COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterProIPR005121:IPR005146:IPR002547:IPR005147:IPR 004532:IPR020825:IPR012340:IPR016027:IPR009061; KEGG: tfu:Tfu_2060 phenylalanyl-tRNA synthetase subunit beta; PFAM: B3/4 domain protein; tRNA synthetase B5; t-RNA-binding domain protein; ferredoxin-fold anticodon-binding; PRIAM: phenylalanine--tRNA ligase; SMART: B3/4 domain protein; ferredoxin-fold anticodon-binding; tRNA synthetase B5; SPTR: C1YVE0 Phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase subunit beta; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase subunit beta, non-spirochete bacterial
YP_003680982.1	COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; InterProIPR004529:IPR004188:IPR006195:IPR010978:IPR 002319; KEGG: tfu:Tfu_2061 phenylalanyl-tRNA synthetase subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; PRIAM: phenylalanine--tRNA ligase; SPTR: C1YVD9 Phenylalanyl-tRNA synthetase, subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, subunit alpha; PFAM: tRNA synthetases class II core domain (F); aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, subunit alpha
YP_003680983.1	COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537; KEGG: tfu:Tfu_2063  rRNA methylase; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; SPTR: C1YVD6 rRNA methylase; PFAM: SpoU rRNA methylase family; RNA 2'-O ribose methyltransferase substrate binding
YP_003680984.1	COGs: COG0292 ribosomal protein L20; InterPro IPR005813; KEGG: tfu:Tfu_2064 50S ribosomal protein L20; PFAM: ribosomal protein L20; SPTR: C1YVD5 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; TIGRFAM: ribosomal protein L20
YP_003680985.1	InterPro IPR001706; KEGG: jde:Jden_1104 ribosomal protein L35; PFAM: ribosomal protein L35; SPTR: C1YVD4 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; TIGRFAM: ribosomal protein L35
YP_003680986.1	COGs: COG0290 translation initiation factor 3 (IF-3); InterPro IPR019814:IPR019815:IPR001288; KEGG: tfu:Tfu_2066 translation initiation factor 3; PFAM: translation initiation factor 3-like; SPTR: C1YVD3 Bacterial translation initiation factor 3 (BIF-3); TIGRFAM: translation initiation factor IF-3; PFAM: translation initiation factor IF-3, C-terminal domain; translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3
YP_003680987.1	COGs: COG0169 shikimate 5-dehydrogenase; InterPro IPR016040:IPR013708:IPR006151; KEGG: sro:Sros_6090 shikimate 5-dehydrogenase; PFAM: shikimate dehydrogenase substrate binding domain protein; shikimate/quinate 5-dehydrogenase; SPTR: C1YVD2 shikimate dehydrogenase; PFAM: shikimate dehydrogenase substrate binding domain; shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase
YP_003680988.1	COGs: COG1559 periplasmic solute-binding protein; InterPro IPR003770; KEGG: tfu:Tfu_2068  integral membrane protein; PFAM: aminodeoxychorismate lyase; SPTR: C1YVD1 Predicted periplasmic solute-binding protein; PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein TIGR00247
YP_003680989.1	COGs: COG0816 endonuclease involved in recombination ( Holliday junction resolvase in Mycoplasmas and B. subtilis); InterPro IPR005227:IPR006641:IPR012337; KEGG: tfu:Tfu_2069 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; SPTR: C1YVI9  uncharacterized protein; PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: conserved hypothetical protein TIGR00250
YP_003680990.1	COGs: COG0013 Alanyl-tRNA synthetase; InterProIPR018163:IPR003156:IPR018164:IPR018162:IPR 018165:IPR012947:IPR002318; KEGG: tfu:Tfu_2070 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; phosphoesterase DHHA1; threonyl/alanyl tRNA synthetase SAD; PRIAM: alanine--tRNA ligase; SMART: threonyl/alanyl tRNA synthetase SAD; SPTR: C1YVI8 Alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: DHHA1 domain; threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanyl-tRNA synthetase
YP_003680991.1	KEGG: vha:VIBHAR_06712 Na(+)-translocating NADH-quinone reductase subunit B; SPTR: C1YVI7  uncharacterized protein
YP_003680992.1	COGs: COG1479 conserved hypothetical protein; InterPro IPR004919:IPR011089; KEGG: nfa:nfa44430 hypothetical protein; PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; SPTR: C1YVI6 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF1524); protein of unknown function DUF262
YP_003680993.1	KEGG: xac:XAC2444 hypothetical protein; SPTR: C1YVI5  uncharacterized protein
YP_003680994.1	KEGG: sro:Sros_7557 hypothetical protein; SPTR: C1YVI4  uncharacterized protein
YP_003680995.1	COGs: COG0286 type I restriction-modification system methyltransferase subunit; InterPro IPR003356:IPR002296; KEGG: sro:Sros_7556 site-specific DNA-methyltransferase (adenine-specific); PFAM: N-6 DNA methylase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: C1YVI2 type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM)
YP_003680996.1	COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: bcj:BCAL0418 type I restriction enzyme specificity protein; PFAM: restriction modification system DNA specificity domain; SPTR: A3WKQ4  specificity protein s; PFAM: type I restriction modification DNA specificity domain
YP_003680997.1	COGs: COG0610 type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterProIPR004473:IPR006935:IPR014021:IPR007409:IPR 014001; KEGG: ach:Achl_1093 type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase; SPTR: C1YVI0 type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type I restriction enzyme R protein N terminus (HSDR_N); Domain of unknown function (DUF3387); type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family
YP_003680998.1	KEGG: fre:Franean1_0892 hypothetical protein; SPTR: C1YVH9  uncharacterized protein; PFAM: RecF/RecN/SMC N terminal domain
YP_003680999.1	KEGG: nfa:nfa46470 hypothetical protein; SPTR: C1YVH8  uncharacterized protein
YP_003681000.1	KEGG: tfu:Tfu_2072 hypothetical protein; SPTR: C1YVH7  uncharacterized protein
YP_003681001.1	KEGG: tfu:Tfu_2073  secreted protein; SPTR: C1YVH6  uncharacterized protein
YP_003681002.1	COGs: COG0515 serine/threonine protein kinase; InterPro IPR011009:IPR017442:IPR000719:IPR017441; KEGG: tfu:Tfu_2074 tyrosine protein kinase:serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SPTR: C1YVH5 protein kinase family protein; PFAM: protein kinase domain
YP_003681003.1	COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003959:IPR003593; KEGG: tfu:Tfu_2081 recombination factor protein RarA; PFAM: ATPase AAA central domain protein; SMART: ATPase AAA; SPTR: C1YVH4 recombination protein MgsA; PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA)
YP_003681004.1	COGs: COG2208 serine phosphatase RsbU regulator of sigma subunit; InterProIPR013656:IPR013655:IPR010822:IPR000014:IPR 001932; KEGG: tfu:Tfu_2083 PAS/protein phosphatase 2C-like; PFAM: stage II sporulation E family protein; PAS fold-3 domain protein; hypothetical protein; SMART: protein phosphatase 2C domain protein; PAS domain containing protein; SPTR: C1YVH3 SpoIIE-like protein with PAS domain; TIGRFAM: PAS sensor protein; PFAM: GAF domain; stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box
YP_003681005.1	COGs: COG0173 aspartyl-tRNA synthetase; InterProIPR004365:IPR004364:IPR004115:IPR012340:IPR 006195:IPR002312:IPR016027:IPR004524; KEGG: tfu:Tfu_2086 aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; SPTR: C1YVH2 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type
YP_003681006.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: tfu:Tfu_2087 hydrolase; SPTR: C1YVH1 Zn-dependent hydrolase, glyoxylase; PFAM: metallo-beta-lactamase superfamily
YP_003681007.1	InterPro IPR007139; KEGG: tfu:Tfu_2088 hypothetical protein; PFAM: protein of unknown function DUF349; SPTR: C1YVH0  uncharacterized protein; PFAM: Domain of Unknown Function (DUF349)
YP_003681008.1	InterPro IPR001434; KEGG: tfu:Tfu_0364 hypothetical protein; SPTR: C1YVG9 Conserved repeat protein; TIGRFAM: conserved repeat domain protein; PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain
YP_003681009.1	COGs: COG0192 S-adenosylmethionine synthetase; InterPro IPR002133; KEGG: tfu:Tfu_1065 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; PRIAM: methionine adenosyltransferase; SPTR: C1YVG8 S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase
YP_003681010.1	COGs: COG0452 phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR003382:IPR007085:IPR005252; KEGG: tfu:Tfu_1064 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; PRIAM: phosphopantothenate--cysteine ligase; SPTR: C1YVG7 phosphopantothenate-cysteine ligase; phosphopantothenoylcysteine decarboxylase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic
YP_003681011.1	InterPro IPR006110:IPR003716; KEGG: tfu:Tfu_1063 DNA-directed RNA polymerase subunit omega; PFAM: RNA polymerase Rpb6; SPTR: C1YVG6 DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit
YP_003681012.1	COGs: COG0194 Guanylate kinase; InterPro IPR008144:IPR017665:IPR008145:IPR020590; KEGG: tfu:Tfu_1062 guanylate kinase; PFAM: guanylate kinase; PRIAM: Guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; SPTR: C1YVG5 Guanylate kinase; TIGRFAM: guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: guanylate kinase
YP_003681013.1	InterPro IPR010979; KEGG: tfu:Tfu_1061 hypothetical protein; SPTR: C1YWK8  uncharacterized protein; PFAM: ribosomal protein S13/S18
YP_003681014.1	COGs: COG0284 Orotidine-5'-phosphate decarboxylase; InterProIPR001754:IPR013785:IPR018089:IPR011060:IPR 014732; KEGG: tfu:Tfu_1060 orotidine-5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; PRIAM: Orotidine-5'-phosphate decarboxylase; SPTR: C1YWK7 Orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1
YP_003681015.1	COGs: COG0167 dihydroorotate dehydrogenase; InterPro IPR012135:IPR013785:IPR001295:IPR005720; KEGG: tfu:Tfu_1059 dihydroorotate oxidase B, catalytic subunit; PFAM: dihydroorotate oxidase; SPTR: C1YWK6 dihydroorotate oxidase B, catalytic subunit; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein
YP_003681016.1	COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterProIPR017938:IPR017927:IPR012165:IPR019480:IPR 001433; KEGG: tfu:Tfu_1058 dihydroorotate oxidase B, electron transfer subunit; PFAM: dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; SPTR: C1YWK5 dihydroorotate oxidase B, electron transfer subunit; PFAM: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; oxidoreductase NAD-binding domain
YP_003681017.1	COGs: COG0458 carbamoylphosphate synthase large subunit (split gene in MJ); InterProIPR006275:IPR005480:IPR005479:IPR016185:IPR 005483:IPR005481:IPR011761:IPR013816:IPR011607:IPR013817; KEGG: tfu:Tfu_1057 carbamoyl-phosphate synthase large subunit; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; carbamoyl-phosphate synthetase large chain domain protein; SMART: MGS domain protein; SPTR: C1YWK4 carbamoyl-phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; carbamoyl-phosphate synthetase large chain, oligomerisation domain; carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit
YP_003681018.1	COGs: COG0505 carbamoylphosphate synthase small subunit; InterProIPR002474:IPR000991:IPR017926:IPR001317:IPR 011702:IPR006220:IPR006274; KEGG: tfu:Tfu_1056 carbamoyl-phosphate synthase small subunit; PFAM: carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; PRIAM: carbamoyl-phosphate synthase (glutamine-hydrolyzing); SPTR: C1YWK3 carbamoyl-phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: carbamoyl-phosphate synthase small chain, CPSase domain; glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit
YP_003681019.1	COGs: COG0044 dihydroorotase and related cyclic amidohydrolase; InterPro IPR004722:IPR002195:IPR006680:IPR011059; KEGG: tfu:Tfu_1055 dihydroorotase; PFAM: amidohydrolase; SPTR: C1YWK2 dihydroorotase; TIGRFAM: dihydroorotase; PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase
YP_003681020.1	COGs: COG0540 aspartate carbamoyltransferase catalytic chain; InterPro IPR006132:IPR006130:IPR006131:IPR002082; KEGG: tfu:Tfu_1054 aspartate carbamoyltransferase catalytic subunit; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; PRIAM: aspartate carbamoyltransferase; SPTR: C1YWG9 aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase
YP_003681021.1	COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: tfu:Tfu_1053 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: uracil phosphoribosyltransferase; SPTR: C1YWG8 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; PFAM: phosphoribosyl transferase domain
YP_003681022.1	InterPro IPR001387:IPR010982; KEGG: tcu:Tcur_3017 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YWG7 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003681023.1	InterPro IPR000182:IPR016181; KEGG: sro:Sros_2789 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C4E6L1 acetyltransferase; PFAM: acetyltransferase (GNAT) family
YP_003681024.1	COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171:IPR004620; KEGG: tfu:Tfu_1050 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; PRIAM: methylenetetrahydrofolate reductase (NAD(P)H); SPTR: C1YWG6 methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form
YP_003681025.1	COGs: COG0142 geranylgeranyl pyrophosphate synthase; InterPro IPR000092:IPR008949; KEGG: tfu:Tfu_1051  polyprenyl synthase / dimethylallyltranstransferase; PFAM: polyprenyl synthetase; SPTR: C1YWG5 geranylgeranyl pyrophosphate synthase; PFAM: polyprenyl synthetase
YP_003681026.1	COGs: COG2311 membrane protein; InterPro IPR007349:IPR007299; KEGG: tfu:Tfu_0622 hypothetical protein; PFAM: protein of unknown function DUF418; protein of unknown function DUF405; SPTR: C1YWG4 Predicted membrane protein, COG2311; PFAM: protein of unknown function (DUF418)
YP_003681027.1	COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030:IPR016040; KEGG: tfu:Tfu_1047 hypothetical protein; PFAM: NmrA family protein; SPTR: C1YWG3 Predicted nucleoside-diphosphate sugar epimerase; PFAM: NmrA-like family
YP_003681028.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR016040:IPR013149:IPR011032:IPR013154; KEGG: nfa:nfa41240  dehydrogenase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; SPTR: C1YWG2 Zn-dependent oxidoreductase, NADPH:quinone reductase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003681029.1	COGs: COG0352 thiamine monophosphate synthase; InterPro IPR003733:IPR013785; KEGG: tfu:Tfu_1046 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; PRIAM: thiamine-phosphate diphosphorylase; SPTR: C1YWG1 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase
YP_003681030.1	KEGG: tfu:Tfu_1045 hypothetical protein; SPTR: C1YWG0  uncharacterized protein
YP_003681031.1	COGs: COG0665 glycine/D-amino acid oxidase (deaminating); InterPro IPR006076:IPR012727; KEGG: tfu:Tfu_1044 thiamine biosynthesis oxidoreductase ThiO; PFAM: FAD dependent oxidoreductase; SPTR: C1YWF9 glycine oxidase; TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO
YP_003681032.1	InterPro IPR003749:IPR012675:IPR016155:IPR010035; KEGG: tfu:Tfu_1043 ThiS, thiamine-biosynthesis; PFAM: thiamineS protein; SPTR: C1YWF8 Sulfur carrier protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS
YP_003681033.1	COGs: COG2022 Uncharacterized protein of thiazole biosynthesis; InterPro IPR008867:IPR013785; KEGG: tcu:Tcur_3035 thiazole biosynthesis family protein; PFAM: thiazole biosynthesis protein; SPTR: C1YWF7 Thiazole-phosphate synthase; PFAM: Thiazole biosynthesis protein ThiG
YP_003681034.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR017442:IPR005543:IPR020635:IPR002290:IPR 008271:IPR000719:IPR011009; KEGG: tfu:Tfu_1041 tyrosine protein kinase:serine/threonine protein kinase:PASTA; PFAM: serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; PASTA domain containing protein; SPTR: C1YWF6 serine/threonine protein kinase; PFAM: protein kinase domain; PASTA domain
YP_003681035.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792:IPR001789:IPR011991:IPR011006; KEGG: sro:Sros_0279 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YW60 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003681036.1	COGs: COG0205 6-phosphofructokinase; InterPro IPR012829:IPR000023:IPR012003:IPR015912; KEGG: tfu:Tfu_1037 6-phosphofructokinase; PFAM: phosphofructokinase; PRIAM: 6-phosphofructokinase; SPTR: C1YW59 Pyrophosphate-dependent phosphofructokinase; TIGRFAM: phosphofructokinase; PFAM: phosphofructokinase; TIGRFAM: phosphofructokinase
YP_003681037.1	COGs: COG0301 thiamine biosynthesis ATP pyrophosphatase; InterPro IPR003720:IPR004114:IPR020536; KEGG: tfu:Tfu_1038 thiamine biosynthesis protein ThiI; PFAM: thiamine biosynthesis protein-like; THUMP domain protein; SPTR: C1YW58 Thiazole biosynthesis/tRNA modification protein ThiI; TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: thiamine biosynthesis protein (ThiI); THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI
YP_003681038.1	COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218:IPR013785:IPR006268; KEGG: tfu:Tfu_1039 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: C1YW57 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase
YP_003681039.1	COGs: COG2041 Sulfite oxidase; InterPro IPR000572; KEGG: tfu:Tfu_1040 hypothetical protein; PFAM: oxidoreductase molybdopterin binding; SPTR: C1YW56 Sulfite oxidase-like oxidoreductase; PFAM: oxidoreductase molybdopterin binding domain
YP_003681040.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: sro:Sros_0280 signal transduction histidine kinase-like protein; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YW55 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003681041.1	KEGG: tfu:Tfu_1035 hypothetical protein; SPTR: C1YW54  uncharacterized protein
YP_003681042.1	COGs: COG1647 esterase/lipase; InterPro IPR000073:IPR012354; KEGG: sro:Sros_2705 alpha/beta hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YW53 esterase/lipase; PFAM: alpha/beta hydrolase fold
YP_003681043.1	COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: tfu:Tfu_1036 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: C1YW52 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_003681044.1	COGs: COG1940 transcriptional regulator/sugar kinase; InterPro IPR000600:IPR004654; KEGG: tfu:Tfu_1033 glucokinase; PFAM: ROK family protein; SPTR: C1YW51 glucokinase; TIGRFAM: glucokinase, ROK family; PFAM: ROK family; TIGRFAM: ROK family protein ( glucokinase)
YP_003681045.1	KEGG: tfu:Tfu_1032 hypothetical protein; SPTR: C1YW50  uncharacterized protein
YP_003681046.1	COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873:IPR020845; KEGG: tfu:Tfu_1031 long-chain fatty-acid-CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YW49 AMP-forming long-chain acyl-CoA synthetase; PFAM: AMP-binding enzyme
YP_003681047.1	COGs: COG1290 cytochrome b subunit of the bc complex; InterPro IPR016174:IPR016175:IPR005797:IPR005798; KEGG: tfu:Tfu_1019 ubiquinol-cytochrome C reductase, cytochrome b subunit; PFAM: cytochrome b/b6 domain; SPTR: C1YW48 cytochrome b subunit of the bc complex; PFAM: cytochrome b(N-terminal)/b6/petB
YP_003681048.1	COGs: COG0723 Rieske Fe-S protein; InterPro IPR017941; KEGG: tfu:Tfu_1020 ubiquinol-cytochrome C reductase iron-sulfur subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: C1YW47 Rieske Fe-S protein; PFAM: Rieske [2Fe-2S] domain
YP_003681049.1	InterPro IPR003088:IPR009056; KEGG: tfu:Tfu_1021 ubiquinol-cytochrome C reductase cytochrome C subunit; PFAM: cytochrome C class I; SPTR: C1YW46 cytochrome C; PFAM: cytochrome C
YP_003681050.1	COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: tfu:Tfu_1022 cytochrome C oxidase subunit III; PFAM: cytochrome C oxidase subunit III; PRIAM: cytochrome-c oxidase; SPTR: C1YW45 Heme/copper-type cytochrome/quinol oxidase subunit 3; PFAM: cytochrome c oxidase subunit III
YP_003681051.1	InterPro IPR001789:IPR011006; KEGG: tfu:Tfu_1023  response regulator; SMART: response regulator receiver; SPTR: C1YW44  uncharacterized protein
YP_003681052.1	COGs: COG0547 anthranilate phosphoribosyltransferase; InterPro IPR000312:IPR005940:IPR020072:IPR017459; KEGG: tfu:Tfu_1024 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; glycosyl transferase, family 3-like; SPTR: C1YW43 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family, a/b domain; glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase
YP_003681053.1	InterPro IPR000387; KEGG: sro:Sros_5761 hypothetical protein; SPTR: C1YUT7  uncharacterized protein
YP_003681054.1	InterPro IPR019887:IPR011008; KEGG: tfu:Tfu_1025 AsnC family transcriptional regulator; PFAM: transcription regulator, AsnC-type-like; SPTR: C1YUT6 AsnC family transcriptional regulator; PFAM: AsnC family
YP_003681055.1	COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: tfu:Tfu_1026 hypothetical protein; PFAM: rhomboid family protein; SPTR: C1YUT5 Uncharacterized membrane protein; PFAM: Rhomboid family
YP_003681056.1	COGs: COG2176 DNA polymerase III subunit alpha (gram-positive type); InterProIPR013520:IPR000305:IPR001943:IPR006055:IPR 012337:IPR006054; KEGG: tfu:Tfu_1027 hypothetical protein; PFAM: exonuclease RNase T and DNA polymerase III; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; PRIAM: DNA-directed DNA polymerase; SMART: exonuclease; excinuclease ABC C subunit domain protein; SPTR: C1YUT4 exonuclease, DNA polymerase III, subunit epsilon family; TIGRFAM: DNA polymerase III epsilon subunit; PFAM: exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, subunit epsilon family
YP_003681057.1	KEGG: sgr:SGR_5365 hypothetical protein; SPTR: C1YUT3  uncharacterized protein
YP_003681058.1	InterPro IPR010298; KEGG: tfu:Tfu_1028 hypothetical protein; PFAM: protein of unknown function DUF901; SPTR: C1YUT2 Predicted RNA-binding protein containing a PIN domain; PFAM: protein of unknown function (DUF901)
YP_003681059.1	COGs: COG0791 cell wall-associated hydrolase (invasion-associated protein); InterPro IPR017909:IPR000064; KEGG: tfu:Tfu_1029  secreted protein; PFAM: NLP/P60 protein; SPTR: C1YUT1 cell wall-associated hydrolase, invasion-associated protein; PFAM: NlpC/P60 family
YP_003681060.1	COGs: COG0791 cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: tfu:Tfu_1030 NLP/P60 family secreted protein; PFAM: NLP/P60 protein; SPTR: C1YUT0 cell wall-associated hydrolase, invasion-associated protein; PFAM: NlpC/P60 family
YP_003681061.1	COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: tcu:Tcur_3059 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: C1YUS9 glycosyltransferase; PFAM: glycosyl transferases group 1
YP_003681062.1	InterPro IPR005490; KEGG: tfu:Tfu_1018 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; SPTR: C1YUS8 Uncharacterized conserved protein; PFAM: L,D-transpeptidase catalytic domain
YP_003681063.1	KEGG: tfu:Tfu_1017 integral membrane protein; SPTR: C1YUS7  uncharacterized protein; PFAM: cytochrome C oxidase subunit IV
YP_003681064.1	COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883:IPR014241; KEGG: tfu:Tfu_1016 cytochrome-c oxidase; PFAM: cytochrome C oxidase subunit I; PRIAM: cytochrome-c oxidase; SPTR: C1YUS6 cytochrome C oxidase subunit I; TIGRFAM: cytochrome C oxidase subunit I; PFAM: cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome C oxidase subunit I
YP_003681065.1	COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterProIPR002429:IPR008972:IPR001505:IPR011759:IPR 015964:IPR014222; KEGG: tfu:Tfu_1015 cytochrome C oxidase subunit II; PFAM: cytochrome C oxidase subunit II; SPTR: C1YUS5 cytochrome C oxidase subunit 2; TIGRFAM: cytochrome C oxidase subunit II; PFAM: cytochrome C oxidase subunit II, periplasmic domain; TIGRFAM: cytochrome C oxidase subunit II
YP_003681066.1	InterPro IPR001455; KEGG: tfu:Tfu_1014  aminotransferase; PFAM: SirA family protein; SPTR: C1YUS4 Predicted redox protein, regulator of disulfide bond formation; PFAM: SirA-like protein
YP_003681067.1	COGs: COG0522 ribosomal protein S4 and related protein; InterPro IPR005709:IPR002942:IPR018079:IPR001912; KEGG: tfu:Tfu_1013 30S ribosomal protein S4; PFAM: RNA-binding S4 domain protein; ribosomal protein S4; SMART: RNA-binding S4 domain protein; SPTR: C1YUS3 30S ribosomal protein S4P; TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type
YP_003681068.1	COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: tfu:Tfu_1012  carbohydrate kinase; PFAM: PfkB domain protein; PRIAM: adenosine kinase; SPTR: C1YUS2 Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase
YP_003681069.1	COGs: COG0316 conserved hypothetical protein; InterPro IPR000361:IPR017870:IPR016092; KEGG: sco:SCO2161 hypothetical protein; PFAM: HesB/YadR/YfhF-family protein; SPTR: C1YUS1 Iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein
YP_003681070.1	COGs: COG0410 ABC-type branched-chain amino acid transporters ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: tfu:Tfu_1185 ABC-type branched-chain amino acid transporters ATPase component; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YUS0 ABC-type branched-chain amino acid transporter ATPase component; PFAM: ABC transporter
YP_003681071.1	COGs: COG4177 ABC-type branched-chain amino acid transporter permease; InterPro IPR001851; KEGG: tfu:Tfu_1183 branched-chain amino acid transporter permease; PFAM: inner-membrane translocator; SPTR: C1YUR7 ABC-type branched-chain amino acid transporter permease; PFAM: Branched-chain amino acid transporter / permease
YP_003681072.1	COGs: COG0559 Branched-chain amino acid ABC-type transporter permeases; InterPro IPR001851; KEGG: tfu:Tfu_1182 branched-chain amino acid ABC-type transporter permeases; PFAM: inner-membrane translocator; SPTR: C1YUR6 Branched-chain amino acid ABC-type transporter permease; PFAM: Branched-chain amino acid transporter / permease
YP_003681073.1	COGs: COG3707 Response regulator with antiterminator output domain; InterProIPR001789:IPR005561:IPR011991:IPR008327:IPR 011006; KEGG: tfu:Tfu_1181 response regulator receiver; PFAM: response regulator receiver; ANTAR domain protein; SMART: response regulator receiver; SPTR: C1YUR5 Response regulator with  antiterminator output domain; PFAM: Response regulator receiver domain; ANTAR domain
YP_003681074.1	InterPro IPR004042:IPR006142; KEGG: tcu:Tcur_2861 hypothetical protein; SPTR: C1YUR4  uncharacterized protein
YP_003681075.1	KEGG: tfu:Tfu_1180 hypothetical protein; SPTR: C1YUR3  uncharacterized protein
YP_003681076.1	COGs: COG0469 pyruvate kinase; InterProIPR015793:IPR015794:IPR015813:IPR018209:IPR 015795:IPR011037:IPR001697; KEGG: tfu:Tfu_1179 pyruvate kinase; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta; PRIAM: pyruvate kinase; SPTR: Q47QQ2 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase, barrel domain; pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase
YP_003681077.1	KEGG: tfu:Tfu_1177 hypothetical protein; SPTR: C1YUR0  uncharacterized protein
YP_003681078.1	KEGG: tfu:Tfu_1175 hypothetical protein; SPTR: C1YUQ9  uncharacterized protein; PFAM: protein of Unknown function (DUF2784)
YP_003681079.1	COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterProIPR000759:IPR017896:IPR012285:IPR009051:IPR 013027:IPR001327:IPR006005; KEGG: tfu:Tfu_1174 glutamate synthase (NADH) small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: C1YUQ8 glutamate synthase (NADH) small subunit; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit
YP_003681080.1	COGs: COG0069 glutamate synthase domain 2; InterProIPR000583:IPR006982:IPR002932:IPR002489:IPR 013785:IPR001202:IPR017932; KEGG: tfu:Tfu_1173 glutamate synthase (NADH) large subunit; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: glutamate synthase (ferredoxin); SPTR: C1YUQ7 glutamate synthase (NADH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; glutamate synthase central domain; glutamine amidotransferases class-II
YP_003681081.1	COGs: COG1568 methyltransferase; InterPro IPR002723:IPR002052; KEGG: tfu:Tfu_1172 methyltransferase; PFAM: protein of unknown function DUF43; SPTR: C1YUQ6 Predicted methyltransferase; PFAM: protein of unknown function DUF43
YP_003681082.1	KEGG: tfu:Tfu_1171 hypothetical protein; SPTR: C1YUQ5  uncharacterized protein
YP_003681083.1	KEGG: tfu:Tfu_1170 hypothetical protein; SPTR: C1YUQ4  uncharacterized protein
YP_003681084.1	COGs: COG0682 Prolipoprotein diacylglyceryltransferase; InterPro IPR001640; KEGG: tfu:Tfu_1169 prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; SPTR: C1YUQ3 Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase
YP_003681085.1	InterPro IPR012336:IPR012335; KEGG: tfu:Tfu_1168 hypothetical protein; SPTR: C1YUQ2  uncharacterized protein
YP_003681086.1	InterPro IPR011637; KEGG: tfu:Tfu_1167 hypothetical protein; PFAM: DoxX family protein; SPTR: C1YUQ1 DoxX protein; PFAM: methylamine utilisation protein MauE
YP_003681087.1	COGs: COG0159 tryptophan synthase alpha chain; InterPro IPR002028:IPR013785:IPR018204:IPR011060; KEGG: tfu:Tfu_1166 tryptophan synthase, alpha chain; PFAM: tryptophan synthase alpha chain; SPTR: C1YUQ0 tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, subunit alpha
YP_003681088.1	COGs: COG0133 tryptophan synthase beta chain; InterPro IPR001926:IPR006653:IPR006654; KEGG: tfu:Tfu_1165 tryptophan synthase subunit beta; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; SPTR: C1YUP9 tryptophan synthase, beta chain; TIGRFAM: tryptophan synthase, beta subunit; PFAM: pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase subunit beta
YP_003681089.1	COGs: COG0134 indole-3-glycerol phosphate synthase; InterPro IPR013798:IPR013785:IPR001468:IPR011060; KEGG: tfu:Tfu_1164 indole-3-glycerol-phosphate synthase; PFAM: indole-3-glycerol phosphate synthase; PRIAM: indole-3-glycerol-phosphate synthase; SPTR: C1YUP8 indole-3-glycerol phosphate synthase; PFAM: indole-3-glycerol phosphate synthase
YP_003681090.1	InterPro IPR007593; KEGG: tfu:Tfu_1162 hypothetical protein; PFAM: Interferon-induced transmembrane protein; SPTR: C1YUP7 Interferon-induced transmembrane protein; PFAM: Interferon-induced transmembrane protein
YP_003681091.1	KEGG: tfu:Tfu_1163 hypothetical protein; SPTR: C1YUP6  uncharacterized protein; PFAM: protein of unknown function (DUF2752)
YP_003681092.1	InterPro IPR007593; KEGG: sen:SACE_1488 hypothetical protein; PFAM: Interferon-induced transmembrane protein; SPTR: C1YUP5 Interferon-induced transmembrane protein; PFAM: Interferon-induced transmembrane protein
YP_003681093.1	KEGG: tfu:Tfu_1161 hypothetical protein; SPTR: C1YUP4  uncharacterized protein
YP_003681094.1	InterPro IPR019051; KEGG: tfu:Tfu_1160 hypothetical protein; PFAM: Trp biosynthesis associated, transmembrane protein, Oprn/Chp; SPTR: C1YUP3 tryptophan-associated transmembrane protein (Trp_oprn_chp); PFAM: tryptophan-associated transmembrane protein (Trp_oprn_chp); TIGRFAM: trp region conserved hypothetical membrane protein
YP_003681095.1	COGs: COG0139 phosphoribosyl-AMP cyclohydrolase; InterPro IPR002496; KEGG: tfu:Tfu_1159 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase; PRIAM: phosphoribosyl-AMP cyclohydrolase; SPTR: C1YUP2 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase
YP_003681096.1	InterPro IPR001347; KEGG: sro:Sros_1799 phosphosugar isomerase-like protein; PFAM: sugar isomerase (SIS); SPTR: C1YUP1 glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
YP_003681097.1	COGs: COG1132 ABC-type multidrug transporter ATPase and permeases; InterProIPR017940:IPR003439:IPR017871:IPR003593:IPR 011527:IPR001140; KEGG: tfu:Tfu_1158 ABC-type multidrug transporter ATPase and permeases; PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; SPTR: C1YUP0 ABC-type multidrug transporter ATPase and permease; PFAM: ABC transporter transmembrane protein; ABC transporter
YP_003681098.1	COGs: COG1132 ABC-type multidrug transporter ATPase and permeases; InterProIPR017940:IPR003439:IPR017871:IPR003593:IPR 011527:IPR001140; KEGG: tfu:Tfu_1157 ABC-type multidrug transporter ATPase and permeases; PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; SPTR: C1YUN9 ABC-type multidrug transporter ATPase and permease; PFAM: ABC transporter; ABC transporter transmembrane protein
YP_003681099.1	InterPro IPR002477:IPR017909; KEGG: hau:Haur_2151 peptidoglycan binding domain-containing protein; PFAM: peptidoglycan-binding domain 1 protein; SPTR: C1YSW3  peptidoglycan-binding domain-containing protein; PFAM:  peptidoglycan binding domain
YP_003681100.1	COGs: COG0107 imidazoleglycerol-phosphate synthase; InterPro IPR006062:IPR013785:IPR011060:IPR004651; KEGG: tfu:Tfu_1156 imidazole glycerol phosphate synthase subunit HisF; PFAM: histidine biosynthesis protein; SPTR: C1YSW2 Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit
YP_003681101.1	COGs: COG0106 phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; InterPro IPR010188:IPR006062:IPR013785:IPR011060; KEGG: tfu:Tfu_1155 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein; PRIAM: phosphoribosylanthranilate isomerase; SPTR: C1YSW1 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase; TIGRFAM: bifunctional HisA/TrpF protein; PFAM: histidine biosynthesis protein; TIGRFAM: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase/N-(5'phosphoribosyl)anthranilate isomerase; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
YP_003681102.1	COGs: COG0118 glutamine amidotransferase; InterPro IPR000991:IPR017926:IPR016226:IPR010139; KEGG: tfu:Tfu_1154 imidazole glycerol phosphate synthase subunit HisH; PFAM: glutamine amidotransferase class-I; SPTR: C1YSW0 Imidazole glycerol phosphate synthase subunit hisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
YP_003681103.1	KEGG: tfu:Tfu_1153 hypothetical protein; SPTR: C1YSV9  uncharacterized protein
YP_003681104.1	COGs: COG0131 imidazoleglycerol-phosphate dehydratase; InterPro IPR000807:IPR020565:IPR020568; KEGG: tfu:Tfu_1152 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; PRIAM: imidazoleglycerol-phosphate dehydratase; SPTR: C1YSV8 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase
YP_003681105.1	COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterProIPR004839:IPR015421:IPR015422:IPR001917:IPR 015424:IPR005861; KEGG: tfu:Tfu_1151 histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; SPTR: C1YSV7 Histidinol phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase
YP_003681106.1	COGs: COG0141 Histidinol dehydrogenase; InterPro IPR012131:IPR001692:IPR018525:IPR016161; KEGG: tfu:Tfu_1150 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; PRIAM: Histidinol dehydrogenase; SPTR: C1YSV6 Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase
YP_003681107.1	COGs: COG1528 Ferritin-like protein; InterPro IPR008331:IPR012347:IPR009040:IPR009078; KEGG: sen:SACE_0130 ferritin family protein; PFAM: ferritin; SPTR: C1YSV4 Ferritin-like protein; PFAM: Ferritin-like domain
YP_003681108.1	COGs: COG2802 Uncharacterized protein similar to the N-terminal domain of Lon protease; InterPro IPR003111; KEGG: tcu:Tcur_2898 peptidase S16; PFAM: peptidase S16; SPTR: C1YSV3 peptidase S16, lon domain protein; PFAM: ATP-dependent protease La (LON) domain
YP_003681109.1	COGs: COG2606 conserved hypothetical protein; InterPro IPR004369:IPR007214; KEGG: sco:SCO2058 transcriptional regulatory protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; SPTR: C1YSV2 YbaK/ebsC protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein
YP_003681110.1	COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873:IPR020845; KEGG: sen:SACE_5343 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YSV1 AMP-forming long-chain acyl-CoA synthetase; PFAM: AMP-binding enzyme
YP_003681111.1	KEGG: tfu:Tfu_1146 hypothetical protein; SPTR: C1YSV0  uncharacterized protein
YP_003681112.1	InterPro IPR007837:IPR007061; KEGG: sma:SAV_3170 hypothetical protein; PFAM: protein of unknown function DUF664; DinB family protein; SPTR: C1YSU9  uncharacterized protein; PFAM: protein of unknown function (DUF664)
YP_003681113.1	COGs: COG1695 transcriptional regulator protein; InterPro IPR005149:IPR011991; KEGG: tfu:Tfu_1147 PadR family transcriptional regulator; PFAM: transcriptional regulator PadR family protein; SPTR: C1YSU8 Predicted transcriptional regulator; PFAM: transcriptional regulator PadR-like family
YP_003681114.1	COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR011708:IPR004365:IPR004805:IPR003141:IPR 016195:IPR004013; KEGG: tfu:Tfu_0047 DNA polymerase III subunit alpha; PFAM: DNA polymerase III subunit alpha; nucleic acid binding OB-fold tRNA/helicase-type; PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: C1YSU7 DNA polymerase III subunit alpha; TIGRFAM: DNA polymerase III, subunit alpha; PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc)
YP_003681115.1	InterPro IPR002711:IPR003615; KEGG: fal:FRAAL4530 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: C1YSU6 HNH endonuclease; PFAM: HNH endonuclease; Domain of unknown function DUF222
YP_003681116.1	COGs: COG1017 Hemoglobin-like flavoprotein; InterProIPR008333:IPR017938:IPR017927:IPR000971:IPR 000951:IPR001433:IPR012292:IPR009050; KEGG: tfu:Tfu_0423 flavohemoprotein; PFAM: oxidoreductase FAD-binding domain protein; globin; oxidoreductase FAD/NAD(P)-binding domain protein; SPTR: C1YSU5 Hemoglobin-like flavoprotein; PFAM: oxidoreductase FAD-binding domain; Globin
YP_003681117.1	COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: tfu:Tfu_0422 BadM/Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074; SPTR: C1YSU4 Rrf2 family protein,  transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: transcriptional regulator; TIGRFAM: rrf2 family protein ( transcriptional regulator)
YP_003681118.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR001411:IPR016196:IPR004638; KEGG: tcu:Tcur_3112 drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; SPTR: C1YSU3 Drug resistance transporter EmrB/QacA subfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily
YP_003681119.1	COGs: COG0413 Ketopantoate hydroxymethyltransferase; InterPro IPR003700:IPR015813; KEGG: tfu:Tfu_0981 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; SPTR: C1YSU2 Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase
YP_003681120.1	COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048:IPR019951; KEGG: tfu:Tfu_0980  oxidoreductase; PFAM: Luciferase-like, subgroup; SPTR: C1YSU1 Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; TIGRFAM:  F420-dependent oxidoreductase; PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv3520c family
YP_003681121.1	COGs: COG2085 dinucleotide-binding protein; InterPro IPR016040:IPR004455:IPR010185; KEGG: tfu:Tfu_0970 reduced coenzyme F420:NADP oxidoreductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; SPTR: C1YSU0 Reduced coenzyme F420:NADP oxidoreductase; TIGRFAM: NADPH-dependent F420 reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: NADPH-dependent F420 reductase
YP_003681122.1	KEGG: tcu:Tcur_3117 hypothetical protein; SPTR: C1YST9  uncharacterized protein
YP_003681123.1	COGs: COG0024 methionine aminopeptidase; InterPro IPR000994:IPR002467:IPR001714; KEGG: tfu:Tfu_0968 methionine aminopeptidase; PFAM: peptidase M24; SPTR: C1YST8 methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_003681124.1	COGs: COG2362 D-aminopeptidase; InterPro IPR007035; KEGG: sco:SCO6486 transport associated protein; PFAM: peptidase M55 D-aminopeptidase; SPTR: C1YST7 D-aminopeptidase DppA; PFAM: D-aminopeptidase
YP_003681125.1	COGs: COG0624 acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650:IPR001261; KEGG: sgr:SGR_1154 hypothetical protein; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: C1YST6 acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase; PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain
YP_003681126.1	COGs: COG1619 conserved hypothetical protein; InterPro IPR003507; KEGG: sen:SACE_2202 carboxylpeptidase; PFAM: peptidase U61 LD-carboxypeptidase A; SPTR: C1YST5 Uncharacterized MccF-like protein (Microcin C7 resistance); PFAM: LD-carboxypeptidase
YP_003681127.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR018062:IPR000005:IPR012287:IPR018060:IPR 009057; KEGG: fre:Franean1_6608 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C1YST4 DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003681128.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: sco:SCO6777 beta-lactamase; SPTR: C1YST3 Zn-dependent hydrolase, glyoxylase; PFAM: metallo-beta-lactamase superfamily
YP_003681129.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR001411:IPR011701:IPR016196; KEGG: sma:SAV_5865 membrane transport protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YST2 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003681130.1	COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: xce:Xcel_3335 HxlR family transcriptional regulator; PFAM: helix-turn-helix HxlR type; SPTR: C1YST1 Predicted transcriptional regulator; PFAM: HxlR-like helix-turn-helix
YP_003681131.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR016040:IPR013149:IPR011032:IPR013154; KEGG: xce:Xcel_3336 alcohol dehydrogenase zinc-binding domain protein; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; SPTR: C1YST0 Zn-dependent oxidoreductase, NADPH:quinone reductase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003681132.1	InterPro IPR001387:IPR010982; KEGG: nml:Namu_0990 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YSS9 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003681133.1	COGs: COG1960 acyl-CoA dehydrogenase; InterProIPR013786:IPR002655:IPR006091:IPR009100:IPR 006090:IPR013764:IPR006092:IPR009075:IPR012258; KEGG: tfu:Tfu_2239 hypothetical protein; PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA oxidase domain protein; SPTR: C1YSS8 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA oxidase; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain
YP_003681134.1	InterPro IPR005149:IPR011991; KEGG: sgr:SGR_4074 PadR-like family transcriptional regulator; PFAM: transcriptional regulator PadR family protein; SPTR: C1YSS7 transcriptional regulator, PadR family; PFAM: transcriptional regulator PadR-like family
YP_003681135.1	KEGG: sen:SACE_4628 hypothetical protein; SPTR: C1YSS6  uncharacterized protein
YP_003681136.1	COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR011701:IPR005829:IPR016196; KEGG: sro:Sros_6833 transporter major facilitator superfamily; PFAM: major facilitator superfamily MFS_1; SPTR: C1YSS5 Major Facilitator Superfamily transporter; PFAM: Major Facilitator Superfamily
YP_003681137.1	COGs: COG2723 beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; InterProIPR001360:IPR018120:IPR013781:IPR017736:IPR 017853; KEGG: sgr:SGR_371  beta-glucosidase; PFAM: glycoside hydrolase family 1; PRIAM: beta-glucosidase; SPTR: C1YSS4 glycosyl hydrolase family 1; TIGRFAM: beta-galactosidase; PFAM: glycosyl hydrolase family 1; TIGRFAM: beta-galactosidase
YP_003681138.1	KEGG: tgr:Tgr7_0968 DNA repair protein RecN; SPTR: C1YSS3  uncharacterized protein
YP_003681139.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sen:SACE_3244 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YSS2 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003681140.1	COGs: COG1960 acyl-CoA dehydrogenase; InterProIPR006092:IPR006091:IPR006090:IPR013786:IPR 013764:IPR009100:IPR009075; KEGG: sen:SACE_3243 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: C1YSS1 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain
YP_003681141.1	COGs: COG4770 acetyl/propionyl-CoA carboxylase alpha subunit; InterProIPR005481:IPR005479:IPR005482:IPR000089:IPR 013817:IPR013816:IPR001882:IPR011761:IPR011764:IPR016185:I PR011054:IPR011053; KEGG: sen:SACE_3242  acetyl/propionyl-CoA carboxylase subunit alpha; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; SPTR: C1YSS0 acetyl/propionyl-CoA carboxylase, subunit alpha; PFAM: carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme
YP_003681142.1	COGs: COG4799 acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022:IPR011762:IPR011763; KEGG: mva:Mvan_4848 propionyl-CoA carboxylase; PFAM: carboxyl transferase; PRIAM: methylcrotonoyl-CoA carboxylase; SPTR: C1YSR9 acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta); PFAM: carboxyl transferase domain
YP_003681143.1	InterPro IPR010839; KEGG: svi:Svir_16490 protein of unknown function (DUF1446); PFAM: protein of unknown function DUF1446; SPTR: C1YSR8  uncharacterized protein; PFAM: protein of unknown function (DUF1446)
YP_003681144.1	KEGG: dhd:Dhaf_0586 collagen triple helix repeat protein; SPTR: C1YSR7  uncharacterized protein
YP_003681145.1	KEGG: smt:Smal_3344 hypothetical protein; SPTR: C1YSR6  uncharacterized protein
YP_003681146.1	COGs: COG0213 thymidine phosphorylase; InterProIPR013102:IPR020072:IPR000053:IPR017872:IPR 000312:IPR018090:IPR017459; KEGG: tcu:Tcur_4189 pyrimidine-nucleoside phosphorylase; PFAM: Pyrimidine nucleoside phosphorylase domain; glycosyl transferase family 3; glycosyl transferase, family 3-like; PRIAM: thymidine phosphorylase; SPTR: C1YSR5 thymidine phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase
YP_003681147.1	COGs: COG0295 Cytidine deaminase; InterPro IPR002125:IPR016192:IPR016193:IPR006262; KEGG: sma:SAV_3366 cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: C1YSR4 Cytidine deaminase; TIGRFAM: cytidine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric
YP_003681148.1	COGs: COG1079 ABC-type transporter permease component; InterPro IPR001851; KEGG: sro:Sros_1272 nucleoside ABC transporter membrane protein; PFAM: inner-membrane translocator; SPTR: C1YSR3 nucleoside ABC transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease
YP_003681149.1	COGs: COG4603 ABC-type uncharacterized transporter permease; InterPro IPR001851; KEGG: sro:Sros_1271 sugar ABC transporter permease; PFAM: inner-membrane translocator; SPTR: C1YSR2 nucleoside ABC transporter membrane protein; PFAM: Branched-chain amino acid transporter / permease
YP_003681150.1	COGs: COG3845 ABC-type uncharacterized transporters ATPase components; InterPro IPR017871:IPR003593:IPR003439; KEGG: sro:Sros_1270 sugar ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YSR1 nucleoside ABC transporter ATP-binding protein; PFAM: ABC transporter
YP_003681151.1	COGs: COG1744 Uncharacterized ABC-type transporter periplasmic component/surface lipoprotein; InterPro IPR003760; KEGG: nca:Noca_3541 basic membrane lipoprotein; PFAM: basic membrane lipoprotein; SPTR: C1YSR0 nucleoside-binding protein; PFAM: Basic membrane protein
YP_003681152.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073:IPR000639; KEGG: rpd:RPD_3289 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; SPTR: C1YSQ9 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003681153.1	COGs: COG0508 pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089:IPR003016:IPR011053; KEGG: art:Arth_2566 biotin/lipoyl attachment domain-containing protein; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: C1YSQ8 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component; PFAM: Biotin-requiring enzyme
YP_003681154.1	COGs: COG0022 pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type subunit beta; InterPro IPR005475:IPR005476:IPR015941:IPR009014; KEGG: aau:AAur_2539 pyruvate dehydrogenase E1 component subunit beta; PFAM: transketolase; transketolase; SPTR: C1YSQ7 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component subunit beta; PFAM: transketolase, C-terminal domain; transketolase, pyrimidine binding domain
YP_003681155.1	COGs: COG1071 pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type subunit alpha; InterPro IPR001017; KEGG: art:Arth_2564 pyruvate dehydrogenase (acetyl-transferring); PFAM: dehydrogenase E1 component; PRIAM: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); SPTR: C1YSQ6 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component subunit alpha; PFAM: dehydrogenase E1 component
YP_003681156.1	COGs: COG1522 transcriptional regulators; InterProIPR011991:IPR011008:IPR019888:IPR019887:IPR 000485; KEGG: tfu:Tfu_2240 AsnC family transcriptional regulator; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type; SPTR: C1YSQ5 transcriptional regulator; PFAM: IclR helix-turn-helix domain; AsnC family
YP_003681157.1	COGs: COG1109 phosphomannomutase; InterProIPR016066:IPR005845:IPR005844:IPR016055:IPR 005846:IPR005841:IPR005843; KEGG: sro:Sros_1282 glucose-1,6-bisphosphate synthase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: C1YSQ4 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase, C-terminal domain; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_003681158.1	COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR000845:IPR011268:IPR011269; KEGG: nml:Namu_1353 purine nucleotide phosphorylase; PFAM: purine or other phosphorylase family 1; SPTR: C1YSQ3 Purine nucleotide phosphorylase; TIGRFAM: purine nucleotide phosphorylase; inosine guanosine and xanthosine phosphorylase family; PFAM: phosphorylase superfamily; TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleotide phosphorylase
YP_003681159.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590:IPR016162:IPR016161; KEGG: sgr:SGR_2631  aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase; SPTR: C1YSQ2 NAD-dependent aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase family
YP_003681160.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590:IPR016162:IPR016161; KEGG: stp:Strop_0827 aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase; PRIAM: betaine-aldehyde dehydrogenase; SPTR: C1YSQ1 aldehyde dehydrogenase (Acceptor); PFAM: aldehyde dehydrogenase family
YP_003681161.1	COGs: COG0274 deoxyribose-phosphate aldolase; InterPro IPR002915:IPR013785:IPR011343; KEGG: tcu:Tcur_0850 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; PRIAM: deoxyribose-phosphate aldolase; SPTR: C1YSQ0 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase
YP_003681162.1	InterPro IPR000182:IPR016181; KEGG: rsa:RSal33209_2452  acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YSP9 acetyltransferase (GNAT) family protein
YP_003681163.1	KEGG: tfu:Tfu_2243 hypothetical protein; SPTR: C1YSP8  uncharacterized protein
YP_003681164.1	KEGG: tfu:Tfu_2244 hypothetical protein; SPTR: C1YSP7 Predicted membrane protein, COG2311; PFAM: protein of unknown function (DUF1624); protein of unknown function (DUF418)
YP_003681165.1	COGs: COG0365 acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR020845:IPR005914:IPR000873; KEGG: tfu:Tfu_2245 acetoacetyl-CoA synthetase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YSP6 acetoacetyl-CoA synthase; TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-binding enzyme; TIGRFAM: acetoacetyl-CoA synthase
YP_003681166.1	COGs: COG0546 phosphatase; InterPro IPR005834; KEGG: tfu:Tfu_0956  phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: C1YSP5 Predicted phosphatase; PFAM: haloacid dehalogenase-like hydrolase
YP_003681167.1	KEGG: tfu:Tfu_0955 hypothetical protein; SPTR: C1YSP4  uncharacterized protein
YP_003681168.1	InterPro IPR020311; KEGG: ach:Achl_3238 hypothetical protein; SPTR: C1YSP3  uncharacterized protein; PFAM: protein of unknown function (DUF2630)
YP_003681169.1	COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: tfu:Tfu_0952 hypothetical protein; PFAM: protein of unknown function DUF156; SPTR: C1YSP2 Uncharacterized conserved protein; PFAM: Uncharacterised BCR, COG1937
YP_003681170.1	COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027:IPR001327; KEGG: tfu:Tfu_0950 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: C1YSP1 NADH dehydrogenase, FAD-containing subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003681171.1	KEGG: mno:Mnod_0216 protein of unknown function DUF882; SPTR: C1YSP0  uncharacterized protein
YP_003681172.1	KEGG: cai:Caci_3358 hypothetical protein; SPTR: C1YSN9  uncharacterized protein
YP_003681173.1	COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterProIPR017938:IPR008333:IPR017927:IPR001709:IPR 001221:IPR001433; KEGG: sen:SACE_2727 oxidoreductase FAD-binding region; PFAM: oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; SPTR: C1YSN8 Flavodoxin reductase family protein; PFAM: oxidoreductase FAD-binding domain; oxidoreductase NAD-binding domain
YP_003681174.1	COGs: COG2041 Sulfite oxidase; InterPro IPR000572; KEGG: cai:Caci_3360 oxidoreductase molybdopterin binding; PFAM: oxidoreductase molybdopterin binding; SPTR: C1YSN7 Sulfite oxidase-like oxidoreductase; PFAM: oxidoreductase molybdopterin binding domain
YP_003681175.1	InterPro IPR001647:IPR012287:IPR011075:IPR009057; KEGG: tfu:Tfu_0949 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YSN6 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003681176.1	COGs: COG4799 acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022:IPR011762:IPR011763; KEGG: tfu:Tfu_0948 propionyl-CoA carboxylase; PFAM: carboxyl transferase; PRIAM: methylcrotonoyl-CoA carboxylase; SPTR: C1YSN5 acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta); PFAM: carboxyl transferase domain
YP_003681177.1	COGs: COG4770 acetyl/propionyl-CoA carboxylase alpha subunit; InterProIPR005481:IPR005479:IPR005482:IPR000089:IPR 013817:IPR013816:IPR001882:IPR011761:IPR011764:IPR016185:I PR011054:IPR011053; KEGG: tfu:Tfu_0947  acetyl/propionyl CoA carboxylase subunit alpha: biotin carboxylase; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; SPTR: C1YSN4 acetyl/propionyl-CoA carboxylase, subunit alpha; PFAM: carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme
YP_003681178.1	COGs: COG1960 acyl-CoA dehydrogenase; InterProIPR013786:IPR006091:IPR006089:IPR009100:IPR 006090:IPR013764:IPR006092:IPR009075; KEGG: tfu:Tfu_0946 butyryl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: C1YSN3 Butyryl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain
YP_003681179.1	KEGG: mab:MAB_4558c hypothetical protein; SPTR: C1YSN2  uncharacterized protein
YP_003681180.1	SPTR: C1YSN1  uncharacterized protein
YP_003681181.1	COGs: COG0441 threonyl-tRNA synthetase; InterProIPR012947:IPR002314:IPR004154:IPR006195:IPR 018158:IPR018163:IPR002320; KEGG: tfu:Tfu_2108 threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); threonyl/alanyl tRNA synthetase SAD; anticodon-binding domain protein; SPTR: C1YSN0 Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: anticodon binding domain; threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synthetase
YP_003681182.1	InterPro IPR019099; KEGG: tfu:Tfu_2110 hypothetical protein; PFAM: protein of unknown function, PGPGW, transmembrane; SPTR: C1YSM9  transmembrane protein (PGPGW); PFAM:  transmembrane protein (PGPGW); TIGRFAM: conserved hypothetical protein TIGR02611
YP_003681183.1	InterPro IPR006776; KEGG: tfu:Tfu_2111  regulator; PFAM: sporulation and cell division protein SsgA; SPTR: C1YSM8 sporulation and cell division protein, SsgA; PFAM: Streptomyces sporulation and cell division protein, SsgA
YP_003681184.1	COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR018300:IPR001544; KEGG: tfu:Tfu_2112  aminotransferase; PFAM: aminotransferase class IV; SPTR: C1YWA2 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; PFAM: aminotransferase class IV
YP_003681185.1	COGs: COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid; InterPro IPR004942; KEGG: tfu:Tfu_2113 hypothetical protein; PFAM: Roadblock/LC7 family protein; SPTR: C1YWA1 Uncharacterized conserved protein; PFAM: Roadblock/LC7 domain
YP_003681186.1	KEGG: ami:Amir_5498 hypothetical protein; SPTR: C1YWA0  uncharacterized protein
YP_003681187.1	COGs: COG1802 transcriptional regulators; InterPro IPR011711:IPR000524:IPR011991; KEGG: ach:Achl_1001 transcriptional regulator, GntR family; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator; SPTR: C1YW99 transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003681188.1	InterPro IPR011701:IPR016196; KEGG: ach:Achl_1002 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: C1YW98 Major Facilitator Superfamily transporter; PFAM: Sugar (and other) transporter
YP_003681189.1	COGs: COG1063 threonine dehydrogenase and related Zn-dependent dehydrogenase; InterProIPR016040:IPR013149:IPR011032:IPR002328:IPR 013154; KEGG: ach:Achl_1003 alcohol dehydrogenase zinc-binding domain protein; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; SPTR: C1YW97 Theronine dehydrogenase-like Zn-dependent dehydrogenase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003681190.1	COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342:IPR018110; KEGG: ach:Achl_1004 mandelate racemase/muconate lactonizing protein; PFAM: mandelate racemase/muconate lactonizing protein; SPTR: C1YW96 D-mannonate dehydratase; PFAM: mandelate racemase / muconate lactonizing enzyme, C-terminal domain; mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YP_003681191.1	COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: ach:Achl_1005 PfkB domain protein; PFAM: PfkB domain protein; SPTR: C1YW95 Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase
YP_003681192.1	COGs: COG0246 Mannitol-1-phosphate/altronate dehydrogenase; InterProIPR013131:IPR016040:IPR008927:IPR013118:IPR 000669:IPR013328; KEGG: ach:Achl_1006 mannitol dehydrogenase domain protein; PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; SPTR: C1YW94 Mannitol-1-phosphate/altronate dehydrogenase; PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain
YP_003681193.1	COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887:IPR013785; KEGG: ach:Achl_1007 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; SPTR: C1YW93 2-keto-3-deoxy-phosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase
YP_003681194.1	KEGG: svi:Svir_21610 hypothetical protein; SPTR: C1YW92  uncharacterized protein
YP_003681195.1	KEGG: nml:Namu_4975 hypothetical protein; SPTR: C1YW90  uncharacterized protein
YP_003681196.1	COGs: COG2508 Regulator of polyketide synthase expression; InterPro IPR000847; KEGG: sro:Sros_8813  PucR family transcriptional regulator; PFAM: regulatory protein LysR; SPTR: C1YW89 Bacterial regulatory helix-turn-helix protein, lysR family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family
YP_003681197.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR009061:IPR015358:IPR012925; KEGG: nfa:nfa29380  transcriptional regulator; PFAM: TipAS antibiotic-recognition domain protein; regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; SPTR: C1YW88 Predicted transcriptional regulator; PFAM: MerR, DNA binding; MerR family regulatory protein; TipAS antibiotic-recognition domain
YP_003681198.1	KEGG: nfa:nfa29390 hypothetical protein; SPTR: C1YW87  uncharacterized protein
YP_003681199.1	COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048; KEGG: tcu:Tcur_3977 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: C1YW86 Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like monooxygenase
YP_003681200.1	COGs: COG1881 phospholipid-binding protein; InterPro IPR008914:IPR005247; KEGG: tfu:Tfu_2116 PBP family phospholipid-binding protein; PFAM: PEBP family protein; SPTR: C1YW85 phospholipid-binding protein, PBP family; PFAM: phosphatidylethanolamine-binding protein; TIGRFAM: conserved hypothetical protein TIGR00481
YP_003681201.1	COGs: COG0458 carbamoylphosphate synthase large subunit (split gene in MJ); InterPro IPR003806:IPR011761; KEGG: ace:Acel_0637 hypothetical protein; PFAM: protein of unknown function DUF201; SPTR: C1YW84 carbamoylphosphate synthase large subunit; PFAM: ATP-grasp domain
YP_003681202.1	COGs: COG1218 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR000760:IPR020583:IPR020550; KEGG: pap:PSPA7_5915 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; SPTR: C1YW83 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; PFAM: inositol monophosphatase family
YP_003681203.1	InterPro IPR012551; KEGG: tfu:Tfu_2118 hypothetical protein; PFAM: protein of unknown function DUF1707; SPTR: C1YW82  uncharacterized protein; PFAM: Domain of unknown function (DUF1707)
YP_003681204.1	KEGG: tfu:Tfu_2120 hypothetical protein; SPTR: Q47N16  uncharacterized protein; PFAM: protein of unknown function (DUF3145)
YP_003681205.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013325:IPR014284; KEGG: nml:Namu_5320 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; SPTR: C1YVB9 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003681206.1	KEGG: tcu:Tcur_1633 hypothetical protein; SPTR: C1YVB8  uncharacterized protein
YP_003681207.1	COGs: COG4995 conserved hypothetical protein; InterPro IPR011717; KEGG: tfu:Tfu_2123 hypothetical protein; PFAM: Tetratricopeptide TPR_4; SPTR: C1YVB7  uncharacterized protein
YP_003681208.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: tfu:Tfu_2125  hydrolase; SPTR: C1YVB6 Zn-dependent hydrolase, glyoxylase; PFAM: metallo-beta-lactamase superfamily
YP_003681209.1	COGs: COG1024 enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: tcu:Tcur_1228 enoyl-CoA hydratase/isomerase; PFAM: enoyl-CoA hydratase/isomerase; SPTR: C1YVB5 enoyl-CoA hydratase/carnithine racemase; PFAM: enoyl-CoA hydratase/isomerase family
YP_003681210.1	KEGG: tfu:Tfu_2127 hypothetical protein; SPTR: C1YVB4  uncharacterized protein
YP_003681211.1	COGs: COG1042 acyl-CoA synthetase (NDP forming); InterProIPR000182:IPR003781:IPR013650:IPR016181:IPR 016102:IPR011761:IPR016040; KEGG: tfu:Tfu_2128 hypothetical protein; PFAM: CoA-binding protein; GCN5-related N-acetyltransferase; ATP-grasp domain protein; SPTR: C1YVB3 acyl-CoA synthetase (NDP forming); PFAM: CoA binding domain; acetyltransferase (GNAT) family
YP_003681212.1	COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611:IPR002173; KEGG: tfu:Tfu_2129  sugar kinase; PFAM: PfkB domain protein; SPTR: C1YVB2 Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase
YP_003681213.1	COGs: COG0514 Superfamily II DNA helicase; InterProIPR011545:IPR001650:IPR018329:IPR014021:IPR 014001:IPR002464; KEGG: tcu:Tcur_1626 ATP-dependent DNA helicase, RecQ family; PFAM: helicase; DEAD/DEAH box helicase domain protein; SMART: helicase; DEAD-like helicase; SPTR: C1YVB1 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family
YP_003681214.1	COGs: COG5498 glycosyl hydrolase; InterPro IPR005200; KEGG: tfu:Tfu_2130 hypothetical protein; PFAM: glycoside hydrolase family 81; SPTR: C1YVB0 Predicted glycosyl hydrolase; PFAM: glycosyl hydrolase family 81
YP_003681215.1	COGs: COG0188 type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterProIPR013760:IPR013758:IPR002205:IPR013757:IPR 006691; KEGG: tfu:Tfu_2131 DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: C1YVA9 DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller
YP_003681216.1	COGs: COG0288 carbonic anhydrase; InterPro IPR001765; KEGG: tfu:Tfu_2132 carbonic anhydrase, PFAM: carbonic anhydrase; SPTR: C1YVA8 carbonic anhydrase; PFAM: carbonic anhydrase
YP_003681217.1	InterPro IPR011990:IPR019734:IPR013026; KEGG: tfu:Tfu_2133 hypothetical protein; SPTR: C1YVA7  uncharacterized protein
YP_003681218.1	COGs: COG0031 Cysteine synthase; InterPro IPR001926:IPR002345; KEGG: bcv:Bcav_0577 pyridoxal-5'-phosphate-dependent protein subunit beta; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: C1YVA6 Cysteine synthase; PFAM: pyridoxal-phosphate dependent enzyme
YP_003681219.1	COGs: COG0187 type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR003594:IPR013506:IPR002288:IPR001241:IPR 013759:IPR018522:IPR000565:IPR013760:IPR020568; KEGG: tfu:Tfu_2134 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIsubunit alpha B region 2 domain protein; ATP-binding region ATPase domain protein; DNA gyrase subunit B domain protein; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; SPTR: C1YVA5 DNA topoisomerase IV subunit B; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase subunit beta, carboxyl terminus
YP_003681220.1	KEGG: tfu:Tfu_2135 hypothetical protein; SPTR: Q47N01  uncharacterized protein
YP_003681221.1	InterPro IPR000182:IPR016181; KEGG: cms:CMS_0895 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YVA3 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003681222.1	KEGG: sro:Sros_9199 hypothetical protein; SPTR: C1YVA2  uncharacterized protein
YP_003681223.1	COGs: COG3022 conserved hypothetical protein; InterPro IPR005583; KEGG: tfu:Tfu_2136 hypothetical protein; PFAM: protein of unknown function DUF328; SPTR: C1YVA1 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF328)
YP_003681224.1	COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR009042:IPR007627:IPR007624:IPR007630:IPR 011991:IPR000943:IPR005479:IPR013325:IPR013324:IPR014284:I PR012760; KEGG: tfu:Tfu_2139 RNA polymerase sigma factor; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein; SPTR: C1YV99 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain
YP_003681225.1	COGs: COG2208 serine phosphatase RsbU regulator of sigma subunit; InterProIPR013655:IPR003018:IPR010822:IPR000014:IPR 001932; KEGG: tfu:Tfu_2140 PAS/protein phosphatase 2C-like; PFAM: stage II sporulation E family protein; PAS fold-3 domain protein; GAF domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; PAS domain containing protein; SPTR: C1YVD0 PAS domain S-box; TIGRFAM: PAS sensor protein; PFAM: GAF domain; stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box
YP_003681226.1	KEGG: tfu:Tfu_2141 hypothetical protein; SPTR: C1YVC9  uncharacterized protein
YP_003681227.1	KEGG: tfu:Tfu_2142 hypothetical protein; SPTR: C1YVC8  uncharacterized protein
YP_003681228.1	COGs: COG2365 protein tyrosine/serine phosphatase; InterPro IPR000387:IPR016130; KEGG: nar:Saro_3082 protein tyrosine/serine phosphatase; SPTR: C1YVC7 protein tyrosine/serine phosphatase
YP_003681229.1	COGs: COG1208 nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/subunit epsilons (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR005835; KEGG: tfu:Tfu_2143  guanyltransferase; PFAM: nucleotidyl transferase; SPTR: C1YVC6 nucleoside-diphosphate-sugar pyrophosphorylase family protein; PFAM: nucleotidyl transferase
YP_003681230.1	COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593:IPR000641:IPR003959; KEGG: tfu:Tfu_2144 ATPase; PFAM: ATPase AAA central domain protein; SMART: ATPase AAA; SPTR: C1YVC5 AAA+ family ATPase; PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: probable Rubsico expression protein CbbX; stage V sporulation protein K
YP_003681231.1	COGs: COG0164 ribonuclease HII; InterPro IPR001352:IPR012337; KEGG: tfu:Tfu_2145 ribonuclease HII; PFAM: ribonuclease HII/HIII; PRIAM: ribonuclease H; SPTR: C1YVC4 ribonuclease; PFAM: ribonuclease HII
YP_003681232.1	KEGG: sro:Sros_7264 membrane protein-like protein; SPTR: C1YVC3  uncharacterized protein
YP_003681233.1	KEGG: tfu:Tfu_2146 hypothetical protein; SPTR: C1YVC1  uncharacterized protein
YP_003681234.1	KEGG: tcu:Tcur_1693 hypothetical protein; SPTR: C1YVC0  uncharacterized protein
YP_003681235.1	COGs: COG0330 membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: tfu:Tfu_2147 hypothetical protein; PFAM: hypothetical protein; SMART: hypothetical protein; SPTR: C1YT38 membrane protease subunit, stomatin/prohibitin (Fragment); PFAM: SPFH domain / Band 7 family
YP_003681236.1	InterPro IPR001107; KEGG: tfu:Tfu_2148 hypothetical protein; PFAM: hypothetical protein; SMART: hypothetical protein; SPTR: C1YT37 membrane protease subunit, stomatin/prohibitin; PFAM: SPFH domain / Band 7 family
YP_003681237.1	KEGG: rmu:RMDY18_14720 ATP-dependent protease Clp, ATPase subunit; SPTR: C1YT36  uncharacterized protein
YP_003681238.1	COGs: COG1372 Intein/homing endonuclease; InterProIPR013678:IPR003587:IPR006141:IPR013344:IPR 006142:IPR000788:IPR003586:IPR004042; KEGG: tcu:Tcur_1586 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase class II vitamin B12-dependent; ribonucleotide reductase large subunit; PRIAM: ribonucleoside-diphosphate reductase; SMART: Hedgehog/intein hint domain protein; SPTR: C1YT35 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase, barrel domain; class II vitamin B12-dependent ribonucleotide reductase; TIGRFAM: intein N-terminal splicing region; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; intein C-terminal splicing region
YP_003681239.1	COGs: COG1327 transcriptional regulator protein consists of a Zn-ribbon and ATP-cone domains; InterPro IPR005144:IPR003796; KEGG: sro:Sros_7130 ATP-cone domain protein; PFAM: ATP-cone domain protein; SPTR: C1YT34 transcriptional regulator NrdR; PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR
YP_003681240.1	COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterProIPR006199:IPR019759:IPR011991:IPR011056:IPR 006197:IPR015927:IPR006200; KEGG: tfu:Tfu_2152 peptidase S24, LexA repressor; PFAM: LexA DNA-binding domain protein; peptidase S24/S26A/S26B, conserved region; PRIAM: Repressor lexA; SPTR: C1YT33 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA binding domain; peptidase S24-like; TIGRFAM: SOS regulatory protein LexA
YP_003681241.1	KEGG: cai:Caci_5534 hypothetical protein; SPTR: C1YT32  uncharacterized protein
YP_003681242.1	KEGG: tfu:Tfu_2154 hypothetical protein; SPTR: C1YT31  uncharacterized protein
YP_003681243.1	KEGG: tfu:Tfu_2155 hypothetical protein; SPTR: C1YT30  uncharacterized protein
YP_003681244.1	COGs: COG0495 leucyl-tRNA synthetase; InterProIPR002302:IPR009008:IPR014729:IPR002300:IPR 013155:IPR001412:IPR009080; KEGG: tfu:Tfu_2156 leucyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; SPTR: C1YT29 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family
YP_003681245.1	COGs: COG0318 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: tfu:Tfu_2158  long-chain-fatty-acid-CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YT28 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme
YP_003681246.1	COGs: COG0395 ABC-type sugar transporter permease component; InterPro IPR000515; KEGG: lxx:Lxx02610 ABC transporter permease protein; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YT27 carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003681247.1	KEGG: mar:MAE_52420 serine/threonine protein kinase like; SPTR: C1YT26  uncharacterized protein
YP_003681248.1	COGs: COG1175 ABC-type sugar transporters permease components; InterPro IPR000515; KEGG: bfa:Bfae_25440 carbohydrate ABC transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YT25 carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003681249.1	COGs: COG1653 ABC-type sugar transporter periplasmic component; InterPro IPR006059; KEGG: lxx:Lxx02590 maltose/trehalose porter; PFAM: extracellular solute-binding protein family 1; SPTR: C1YT24 carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein
YP_003681250.1	KEGG: tfu:Tfu_2159 hypothetical protein; SPTR: C1YT23  uncharacterized protein
YP_003681251.1	COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR003333; KEGG: tfu:Tfu_2160  cyclopropane fatty acid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; SPTR: C1YT22 methyltransferase, cyclopropane fatty acid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_003681252.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR016166:IPR006094; KEGG: tfu:Tfu_2161 hypothetical protein; PFAM: FAD linked oxidase domain protein; SPTR: C1YT21 FAD/FMN-dependent dehydrogenase; PFAM: FAD binding domain
YP_003681253.1	COGs: COG0796 glutamate racemase; InterPro IPR015942:IPR001920:IPR018187; KEGG: tfu:Tfu_2162 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; PRIAM: glutamate racemase; SPTR: C1YT20 glutamate racemase; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase
YP_003681254.1	KEGG: tfu:Tfu_2163 hypothetical protein; SPTR: C1YT19  uncharacterized protein
YP_003681255.1	KEGG: tfu:Tfu_2164 hypothetical protein; SPTR: C1YT18  uncharacterized protein
YP_003681256.1	KEGG: tfu:Tfu_2166 hypothetical protein; SPTR: C1YT17  uncharacterized protein
YP_003681257.1	COGs: COG1199 Rad3-related DNA helicase; InterPro IPR011545:IPR014001:IPR006555:IPR014013; KEGG: tfu:Tfu_2167 helicase c2:DEAD/DEAH box helicase, N-terminal; PFAM: DEAD/DEAH box helicase domain protein; SMART: helicase c2; DEAD-like helicase; SPTR: C1YT16 DNA helicase, Rad3; PFAM: DEAD/DEAH box helicase; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_003681258.1	COGs: COG3832 conserved hypothetical protein; InterPro IPR013538; KEGG: mac:MA3610 hypothetical protein; PFAM: activator of Hsp90 ATPase 1 family protein; SPTR: C1YT15 Uncharacterized conserved protein; PFAM: activator of Hsp90 ATPase homolog 1-like protein
YP_003681259.1	COGs: COG0640 transcriptional regulator protein; InterPro IPR001845:IPR011991; KEGG: sen:SACE_5771 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: C1YT14 ArsR family transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family
YP_003681260.1	KEGG: mva:Mvan_1941 hypothetical protein; SPTR: C1YT13  uncharacterized protein
YP_003681261.1	COGs: COG0234 Co-chaperonin GroES (HSP10); InterPro IPR011032:IPR020818:IPR001476; KEGG: ami:Amir_6966 chaperonin Cpn10; PFAM: chaperonin Cpn10; SPTR: C1YT12 10 kDa chaperonin; PFAM: chaperonin 10 Kd subunit
YP_003681262.1	InterPro IPR009057:IPR001647:IPR012287; KEGG: rer:RER_52440 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YT11  uncharacterized protein; PFAM: Bacterial regulatory proteins, tetR family
YP_003681263.1	COGs: COG1132 ABC-type multidrug transporter ATPase and permeases; InterProIPR017871:IPR011527:IPR001140:IPR003439:IPR 017940:IPR003593; KEGG: ami:Amir_2777 ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane protein; SMART: AAA ATPase; SPTR: C1YT10 ABC-type multidrug transporter ATPase and permease component; PFAM: ABC transporter transmembrane protein; ABC transporter
YP_003681264.1	COGs: COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase; InterProIPR000262:IPR013785:IPR008259:IPR017934:IPR 012133; KEGG: rer:RER_02640 FMN-dependent dehydrogenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; PRIAM: lactate 2-monooxygenase; SPTR: C1YT09 alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase
YP_003681265.1	COGs: COG0395 ABC-type sugar transporter permease component; InterPro IPR000515; KEGG: fre:Franean1_4615 binding-protein-dependent transporters inner membrane component; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YT08 carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003681266.1	COGs: COG1175 ABC-type sugar transporters permease components; InterPro IPR000515; KEGG: mxa:MXAN_7294  sugar ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YT07 carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003681267.1	COGs: COG1653 ABC-type sugar transporter periplasmic component; InterPro IPR006059; KEGG: kra:Krad_4015 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: C1YT06 carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein
YP_003681268.1	COGs: COG0366 glycosidase; InterPro IPR006589:IPR006047:IPR013781:IPR017853; KEGG: sen:SACE_6260 alpha-glucosidase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: C1YT04 glycosidase; PFAM: alpha amylase, catalytic domain
YP_003681269.1	COGs: COG0406 fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: tfu:Tfu_2169  phosphoglycerate mutase; PFAM: phosphoglycerate mutase; SPTR: C1YT03 fructose-2,6-bisphosphatase; PFAM: phosphoglycerate mutase family
YP_003681270.1	COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: tfu:Tfu_2170 iojap-related protein; PFAM: Iojap-related protein; SPTR: C1YT02 Iojap-related protein; TIGRFAM: iojap-like protein; PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-related protein
YP_003681271.1	COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; InterPro IPR004821:IPR005248:IPR004820:IPR014729; KEGG: tfu:Tfu_2171 nicotinic acid mononucleotide adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Nicotinate-nucleotide adenylyltransferase; SPTR: C1YT01 Nicotinate-nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain
YP_003681272.1	COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: tfu:Tfu_2172 hypothetical protein; PFAM: peptidase M48 Ste24p; SPTR: C1YT00 Zn-dependent protease with chaperone function; PFAM: peptidase family M48
YP_003681273.1	COGs: COG1506 dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR001375; KEGG: cai:Caci_1203 dienelactone hydrolase; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; SPTR: C1YSZ9 prolyl oligopeptidase family protein; PFAM: prolyl oligopeptidase family
YP_003681274.1	KEGG: bcv:Bcav_0167 hypothetical protein; SPTR: C1YSZ8  uncharacterized protein
YP_003681275.1	COGs: COG0014 gamma-glutamyl phosphate reductase; InterProIPR000965:IPR016161:IPR020593:IPR015590:IPR 016162:IPR012134:IPR016163; KEGG: tfu:Tfu_2175 gamma-glutamyl phosphate reductase; PFAM: aldehyde dehydrogenase; SPTR: C1YSZ7 glutamate-5-semialdehyde dehydrogenase; TIGRFAM: gamma-glutamyl phosphate reductase; PFAM: aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase
YP_003681276.1	InterPro IPR000873; KEGG: ara:Arad_12482 3-oxoacyl-ACP reductase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YSZ6 Coenzyme F390 synthetase; PFAM: AMP-binding enzyme
YP_003681277.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: sen:SACE_7069 aldo/keto reductase family oxidoreductase; PFAM: aldo/keto reductase; SPTR: C1YSZ5 Predicted oxidoreductase similar to aryl-alcohol dehydrogenase; PFAM: Aldo/keto reductase family
YP_003681278.1	InterPro IPR000835:IPR011991; KEGG: cai:Caci_8819 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YSZ4 transcriptional regulator; PFAM: MarR family
YP_003681279.1	COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterProIPR013747:IPR016039:IPR004655:IPR016038:IPR 013751; KEGG: mmi:MMAR_3221 3-oxoacyl-[acyl-carrier-protein] synthase III, FabH_1; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; PRIAM: beta-ketoacyl-acyl-carrier-protein synthase I; SPTR: C1YSZ3 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_003681280.1	COGs: COG0560 phosphoserine phosphatase; InterPro IPR006383:IPR005834:IPR006385; KEGG: fra:Francci3_2094 HAD family hydrolase; PFAM: haloacid dehalogenase; SPTR: C1YSZ2 HAD-superfamily subfamily IB hydrolase, TIGR01490; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
YP_003681281.1	InterPro IPR005509; KEGG: saq:Sare_3017 A-factor biosynthesis protein; PFAM: A-factor biosynthesis repeat-containing protein; SPTR: C1YSZ1 A-factor biosynthesis repeat protein; PFAM: A-factor biosynthesis repeat
YP_003681282.1	InterPro IPR005829:IPR016196:IPR011701:IPR001411; KEGG: spe:Spro_4865 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YSZ0 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily
YP_003681283.1	COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR002938:IPR003042; KEGG: fra:Francci3_2111 monooxygenase, FAD-binding; PFAM: monooxygenase FAD-binding; SPTR: C1YSY9 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain
YP_003681284.1	KEGG: ara:Arad_12482 3-oxoacyl-ACP reductase; SPTR: C1YSY8  uncharacterized protein
YP_003681285.1	COGs: COG1878 metal-dependent hydrolase; InterPro IPR017909:IPR006311:IPR007325; KEGG: rrs:RoseRS_1211 cyclase family protein; PFAM: cyclase family protein; SPTR: C1YSY7 Predicted metal-dependent hydrolase, COG1878; PFAM:  cyclase
YP_003681286.1	InterPro IPR011067; KEGG: tfu:Tfu_0365 hypothetical protein; SPTR: C1YSY6  uncharacterized protein; PFAM: PemK-like protein
YP_003681287.1	COGs: COG0657 esterase/lipase; InterPro IPR013094; KEGG: fre:Franean1_3664 alpha/beta hydrolase domain-containing protein; PFAM: alpha/beta hydrolase; SPTR: C1YSY5 esterase/lipase; PFAM: alpha/beta hydrolase fold
YP_003681288.1	COGs: COG0263 glutamate 5-kinase; InterProIPR001048:IPR015947:IPR005715:IPR011529:IPR 002478:IPR001057; KEGG: tfu:Tfu_2179 gamma-glutamyl kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; PRIAM: glutamate 5-kinase; SMART: PUA domain containing protein; SPTR: C1YSY4 glutamate 5-kinase; TIGRFAM: glutamate 5-kinase; PFAM: PUA domain; amino acid kinase family; TIGRFAM: glutamate 5-kinase
YP_003681289.1	COGs: COG0536 GTPase; InterProIPR014100:IPR006074:IPR006169:IPR002917:IPR 006073:IPR015349; KEGG: tfu:Tfu_2180 GTPase ObgE; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein; SPTR: C1YSY3 GTP-binding protein Obg/CgtA; TIGRFAM: GTP-binding protein Obg/CgtA; Obg family GTPase CgtA; PFAM: GTPase of unknown function; GTP1/OBG; Domain of unknown function (DUF1967); TIGRFAM: Obg family GTPase CgtA; Obg family GTPase CgtA, C-terminal extension; small GTP-binding protein domain
YP_003681290.1	COGs: COG0211 ribosomal protein L27; InterPro IPR018261:IPR001684; KEGG: rop:ROP_10340 50S ribosomal protein L27; PFAM: ribosomal protein L27; SPTR: C1YSY2 50S ribosomal protein L27P; TIGRFAM: ribosomal protein L27; PFAM: ribosomal L27 protein; TIGRFAM: ribosomal protein L27
YP_003681291.1	COGs: COG0261 ribosomal protein L21; InterPro IPR018258:IPR001787; KEGG: tfu:Tfu_2182 50S ribosomal protein L21; PFAM: ribosomal protein L21; SPTR: C1YSY1 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21
YP_003681292.1	COGs: COG1530 ribonuclease G and E; InterProIPR017441:IPR016027:IPR004659:IPR003029:IPR 019307:IPR012340; KEGG: tfu:Tfu_2183 ribonuclease E and G; PFAM: RNA-binding protein AU-1/ribonuclease E/G; RNA binding S1 domain protein; PRIAM: ribonuclease E; SPTR: C1YSY0 RNAse G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family
YP_003681293.1	COGs: COG5011 conserved hypothetical protein; InterPro IPR018768; KEGG: tfu:Tfu_2184 hypothetical protein; PFAM: protein of unknown function DUF2344; SPTR: C1YSX9 Uncharacterized conserved protein (DUF2344); PFAM: Uncharacterized protein conserved in bacteria (DUF2344)
YP_003681294.1	COGs: COG1032 Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: tfu:Tfu_2185 elongator protein 3/MiaB/NifB; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C1YSX8 Fe-S oxidoreductase; PFAM: radical SAM superfamily
YP_003681295.1	COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR018365:IPR011923:IPR001182; KEGG: tcu:Tcur_1543 rod shape-determining protein RodA; PFAM: cell cycle protein; SPTR: C1YSX7 Rod shape-determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; TIGRFAM: rod shape-determining protein RodA; cell division protein FtsW
YP_003681296.1	COGs: COG0768 cell division protein FtsI/penicillin-binding protein 2; InterPro IPR012338:IPR005311:IPR017790:IPR001460; KEGG: tcu:Tcur_1542 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: peptidoglycan glycosyltransferase; SPTR: C1YSX6 Penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding protein dimerisation domain; TIGRFAM: penicillin-binding protein 2
YP_003681297.1	InterPro IPR007227; KEGG: tcu:Tcur_1541 rod shape-determining protein MreD; SPTR: C1YSX5 Rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD
YP_003681298.1	COGs: COG1792 cell shape-determining protein; InterPro IPR007221; KEGG: tcu:Tcur_1540 rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; SPTR: C1YSX4 Rod shape-determining protein MreC; PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC
YP_003681299.1	COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: sro:Sros_7282 cell shape determining protein MreB; PFAM: cell shape determining protein MreB/Mrl; SPTR: C1YSX3 Rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family
YP_003681300.1	COGs: COG0105 nucleoside diphosphate kinase; InterPro IPR001564; KEGG: tfu:Tfu_2188 nucleoside diphosphate kinase; PFAM: nucleoside diphosphate kinase; PRIAM: nucleoside-diphosphate kinase; SMART: nucleoside diphosphate kinase; SPTR: C1YSX2 nucleoside diphosphate kinase; PFAM: nucleoside diphosphate kinase
YP_003681301.1	KEGG: tfu:Tfu_2189 hypothetical protein; SPTR: C1YSX1  uncharacterized protein
YP_003681302.1	COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR018109:IPR013221:IPR004101:IPR001645; KEGG: tfu:Tfu_2190 folylpolyglutamate synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; SPTR: C1YSX0 Folylpolyglutamate synthase/dihydrofolate synthase; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase
YP_003681303.1	COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR013221; KEGG: ade:Adeh_1258 FolC bifunctional protein; SPTR: C1YSW9  uncharacterized protein; PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase
YP_003681304.1	InterPro IPR017909; KEGG: sro:Sros_1396  secreted protein; SPTR: C1YSW8  uncharacterized protein
YP_003681305.1	InterPro IPR017909; KEGG: sen:SACE_5644 secreted protein; SPTR: C1YSW7  uncharacterized protein
YP_003681306.1	KEGG: sen:SACE_5644 secreted protein; SPTR: C1YSW6 Uncharacterized conserved protein
YP_003681307.1	COGs: COG3544 conserved hypothetical protein; InterPro IPR005183; KEGG: sco:SCO1106 lipoprotein; PFAM: protein of unknown function DUF305; SPTR: C1YSW5 Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF305)
YP_003681308.1	COGs: COG1219 ATP-dependent protease Clp ATPase subunit; InterProIPR004487:IPR010603:IPR013093:IPR019489:IPR 003593; KEGG: tfu:Tfu_2192 ATP-dependent protease ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; Clp ATPase-like; SMART: ATPase AAA; SPTR: C1YS09 ATP-dependent Clp protease ATP-binding subunit ClpX; TIGRFAM: ATP-dependent Clp protease ATP-binding subunit ClpX; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX)
YP_003681309.1	COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR018215:IPR001907; KEGG: tfu:Tfu_2193 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP; PRIAM: endopeptidase Clp; SPTR: C1YQD7 ATP-dependent Clp protease proteolytic subunit; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease proteolytic subunit ClpP
YP_003681310.1	COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR018215:IPR001907; KEGG: tfu:Tfu_2194 ClpP1 peptidase. serine peptidase. MEROPS family S14; PFAM: peptidase S14 ClpP; PRIAM: endopeptidase Clp; SPTR: C1YQD6 ATP-dependent Clp protease proteolytic subunit; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease proteolytic subunit ClpP
YP_003681311.1	COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); InterPro IPR008881:IPR008880:IPR005215:IPR001179; KEGG: tfu:Tfu_2195 trigger factor; PFAM: trigger factor domain; peptidylprolyl isomerase FKBP-type; trigger factor domain protein; SPTR: C1YQD5 Trigger factor; TIGRFAM: trigger factor; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor
YP_003681312.1	COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPro IPR014729:IPR004821:IPR004820; KEGG: tfu:Tfu_2196 cytidyltransferase-related; PFAM: cytidylyltransferase; SPTR: C1YQD4 Cytidyltransferase-related enzyme; TIGRFAM: cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: cytidyltransferase-related domain
YP_003681313.1	COGs: COG1132 ABC-type multidrug transporter ATPase and permeases; InterProIPR017871:IPR011527:IPR001140:IPR003439:IPR 017940:IPR003593; KEGG: tfu:Tfu_2197 ABC-type multidrug transporter ATPase and permeases; PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; SPTR: C1YQD3 ABC-type multidrug transporter ATPase and permease; PFAM: ABC transporter; ABC transporter transmembrane protein
YP_003681314.1	InterPro IPR012336; KEGG: sco:SCO0989 hypothetical protein; SPTR: C1YQD2  uncharacterized protein
YP_003681315.1	InterPro IPR011055:IPR016047; KEGG: sco:SCO4082 secreted peptidase; PFAM: peptidase M23; SPTR: C1YQD1 membrane-bound metallopeptidase; PFAM: peptidase family M23
YP_003681316.1	KEGG: tfu:Tfu_2198 hypothetical protein; SPTR: C1YQD0  uncharacterized protein
YP_003681317.1	COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); InterPro IPR000644:IPR006668:IPR006667:IPR006669; KEGG: tfu:Tfu_2199 divalent cation transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; hypothetical protein; SPTR: C1YQC9 Mg2+ transporter MgtE; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE)
YP_003681318.1	COGs: COG2208 serine phosphatase RsbU regulator of sigma subunit; InterPro IPR010822:IPR001932; KEGG: tfu:Tfu_2200 protein phosphatase 2C-like; PFAM: stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; SPTR: C1YQC8 stage II sporulation protein E (SpoIIE); PFAM: stage II sporulation protein E (SpoIIE)
YP_003681319.1	COGs: COG0698 ribose 5-phosphate isomerase RpiB; InterPro IPR003500:IPR011860; KEGG: tfu:Tfu_2202 ribose-5-phosphate isomerase B; PFAM: ribose/galactose isomerase; SPTR: C1YQC7 ribose 5-phosphate isomerase; TIGRFAM: ribose 5-phosphate isomerase; sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase; sugar-phosphate isomerases, RpiB/LacA/LacB family
YP_003681320.1	SPTR: C1YQC6  uncharacterized protein
YP_003681321.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016161:IPR015590:IPR016162:IPR016160; KEGG: sro:Sros_7323 betaine-aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase; SPTR: C1YQC5 NAD-dependent aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase family
YP_003681322.1	KEGG: tcu:Tcur_3029 hypothetical protein; SPTR: C1YQC4  uncharacterized protein
YP_003681323.1	InterPro IPR012336; KEGG: tfu:Tfu_2203 hypothetical protein; SPTR: C1YQC3  uncharacterized protein; PFAM: DSBA-like thioredoxin domain
YP_003681324.1	COGs: COG0308 aminopeptidase N; InterPro IPR012778:IPR014782; KEGG: tfu:Tfu_2204 aminopeptidase N; PFAM: peptidase M1 membrane alanine aminopeptidase; SPTR: C1YQC2 membrane alanyl aminopeptidase; TIGRFAM: aminopeptidase N; PFAM: Domain of unknown function (DUF3358); peptidase family M1; TIGRFAM: aminopeptidase N, Streptomyces lividans type
YP_003681325.1	COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR016160:IPR017853:IPR003385:IPR013781; KEGG: tfu:Tfu_2205 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 77; PRIAM: 4-alpha-glucanotransferase; SPTR: C1YQC1 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase
YP_003681326.1	InterPro IPR016196:IPR011701; KEGG: tfu:Tfu_2206  transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YQC0 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003681327.1	COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR020556:IPR000120; KEGG: tfu:Tfu_2207 amidase; PFAM: amidase; SPTR: C1YQB9 amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit alpha; PFAM: amidase
YP_003681328.1	InterPro IPR011528; KEGG: tfu:Tfu_2208 hypothetical protein; PFAM: NERD domain protein; SPTR: C1YQB8 Nuclease-like protein; PFAM: Nuclease-related domain
YP_003681329.1	COGs: COG0129 dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR020558:IPR004404:IPR000581; KEGG: tfu:Tfu_2209 dihydroxyacid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: dihydroxy-acid dehydratase; SPTR: C1YQB7 dihydroxyacid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase
YP_003681330.1	InterPro IPR013429; KEGG: sco:SCO2357 hypothetical protein; PFAM:  regulatory protein FmdB; SPTR: C1YQB6  regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: Zinc ribbon domain; TIGRFAM:  regulatory protein, FmdB family
YP_003681331.1	COGs: COG1487 nucleic acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: xce:Xcel_2919 PilT protein domain protein; PFAM: PilT protein domain protein; SPTR: C1YQB5 Predicted nucleic acid-binding protein, contains PIN domain; PFAM: PIN domain
YP_003681332.1	InterPro IPR006442:IPR003756; KEGG: xce:Xcel_2918 prevent-host-death family protein; PFAM: protein of unknown function DUF172; SPTR: C1YQB4 Prevent-host-death family protein; TIGRFAM: prevent-host-death family protein; PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein
YP_003681333.1	COGs: COG1403 Restriction endonuclease; InterPro IPR003615:IPR002711; KEGG: tfu:Tfu_2211 HNH nuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: C1YQB3 Restriction endonuclease; PFAM: HNH endonuclease
YP_003681334.1	COGs: COG1505 serine protease of the peptidase family S9A; InterProIPR013838:IPR002471:IPR004106:IPR001375:IPR 002470; KEGG: tfu:Tfu_2212 prolyl oligopeptidase; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; PRIAM: prolyl oligopeptidase; SPTR: Q47MS4 prolyl oligopeptidase. serine peptidase. MEROPS family S09A; PFAM: prolyl oligopeptidase, N-terminal beta-propeller domain; prolyl oligopeptidase family
YP_003681335.1	COGs: COG0824 thioesterase; InterPro IPR006683; KEGG: tfu:Tfu_2213 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: C1YQB0 Predicted thioesterase; PFAM: thioesterase superfamily; TIGRFAM: conserved hypothetical protein TIGR00051
YP_003681336.1	COGs: COG2346 Truncated hemoglobins; InterPro IPR019795:IPR012292:IPR001486:IPR009050; KEGG: tfu:Tfu_2215 hypothetical protein; PFAM: globin; SPTR: C1YQA9 Hemoglobin; PFAM: Bacterial-like globin
YP_003681337.1	COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR017871:IPR003593:IPR003439; KEGG: tfu:Tfu_2216  ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YQA8 ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter
YP_003681338.1	KEGG: tfu:Tfu_2217 hypothetical protein; SPTR: C1YQA7  uncharacterized protein
YP_003681339.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: tfu:Tfu_2218 GGDEF; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: C1YQA6 Diguanylate cyclase (GGDEF) domain-containing protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_003681340.1	KEGG: tfu:Tfu_2219 GTPase; SPTR: C1YQA5  uncharacterized protein
YP_003681341.1	KEGG: tfu:Tfu_2220  ABC transporter; SPTR: C1YQA4  uncharacterized protein; PFAM: Dynamin family
YP_003681342.1	COGs: COG0007 uroporphyrinogen-III methylase; InterProIPR000878:IPR016040:IPR006367:IPR006366:IPR 014777:IPR014776; KEGG: tfu:Tfu_2221 uroporphyrinogen-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: C1YQA3 uroporphyrinogen-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Tetrapyrrole (Corrin/Porphyrin) methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase, N-terminal domain
YP_003681343.1	COGs: COG2038 NaMN:DMB phosphoribosyltransferase; InterPro IPR003200:IPR000415:IPR012825:IPR017846; KEGG: tfu:Tfu_2222 cob(II)yrinic acid a,c-diamide reductase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nitroreductase; SPTR: C1YQA2 Cob(II)yrinic acid a,c-diamide reductase; TIGRFAM:nicotinate-nucleotide/ dimethylbenzimidazole phosphoribosyltransferase; cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase family; phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; cob(II)yrinic acid a,c-diamide reductase
YP_003681344.1	COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR004838:IPR015424:IPR004839:IPR015421; KEGG: tfu:Tfu_2223 hypothetical protein; PFAM: aminotransferase class I and II; SPTR: C1YQA0 L-threonine O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase
YP_003681345.1	InterPro IPR017909:IPR002502; KEGG: ami:Amir_5070 N-acetylmuramoyl-L-alanine amidase family 2; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SPTR: C1YQ99 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003681346.1	COGs: COG1670 acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR016181:IPR000182; KEGG: sma:SAV_6793 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YQ98 acetyltransferase, ribosomal protein N-acetylase; PFAM: acetyltransferase (GNAT) family
YP_003681347.1	KEGG: tfu:Tfu_2230 hypothetical protein; SPTR: C1YQ97  uncharacterized protein
YP_003681348.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR017441:IPR008271:IPR011009:IPR017442:IPR 000719:IPR020635:IPR002290; KEGG: tfu:Tfu_2229 tyrosine protein kinase:serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: C1YQ96 protein kinase family protein; PFAM: protein kinase domain
YP_003681349.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterProIPR016040:IPR013149:IPR011032:IPR002364:IPR 013154; KEGG: tfu:Tfu_2228  quinone oxidoreductase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; SPTR: C1YQ95 Zn-dependent oxidoreductase, NADPH:quinone reductase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003681350.1	COGs: COG0330 membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001972:IPR001107:IPR018080; KEGG: tfu:Tfu_2227 SPFH domain-containing protein/band 7 family protein; PFAM: hypothetical protein; SMART: hypothetical protein; SPTR: C1YQ94 SPFH domain, Band 7 family protein; PFAM: SPFH domain / Band 7 family
YP_003681351.1	COGs: COG1585 membrane protein implicated in regulation of membrane protease activity; InterPro IPR002810; KEGG: tfu:Tfu_2226  integral membrane protein; PFAM: protein of unknown function DUF107; SPTR: C1YQ93 membrane protein implicated in regulation of membrane protease activity; PFAM: NfeD-like
YP_003681352.1	COGs: COG2366 protein related to penicillin acylase; InterPro IPR002692; KEGG: svi:Svir_14090 penicilin amidase; PFAM: peptidase S45 penicillin amidase; SPTR: C1YQ92 Penicilin amidase; PFAM: Penicillin amidase
YP_003681353.1	KEGG: tfu:Tfu_2225 hypothetical protein; SPTR: C1YQ91  uncharacterized protein
YP_003681354.1	COGs: COG1270 Cobalamin biosynthesis protein CobD/CbiB; InterPro IPR004485; KEGG: tfu:Tfu_2224 cobalamin biosynthesis protein; PFAM: cobalamin biosynthesis protein CbiB; SPTR: C1YQ90 adenosylcobinamide-phosphate synthase; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD
YP_003681355.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: sgr:SGR_2602  hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YQ89 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003681356.1	InterProIPR009057:IPR011075:IPR001647:IPR004111:IPR 012287; KEGG: sgr:SGR_2601 TetR family transcriptional regulator; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; SPTR: C1YQ88 transcriptional regulator, tetR family; PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family
YP_003681357.1	InterPro IPR011010:IPR002104:IPR013762; KEGG: fre:Franean1_6721 integrase family protein; PFAM: integrase family protein; SPTR: C1YQ87 Site-specific recombinase XerD; PFAM: Phage integrase family
YP_003681358.1	KEGG: ace:Acel_1410 ECF subfamily RNA polymerase sigma-24 factor; SPTR: C1YQ86  uncharacterized protein
YP_003681359.1	KEGG: sco:SCO2192 regulator; SPTR: C1YQ85  uncharacterized protein
YP_003681360.1	COGs: COG2334  homoserine kinase type II (protein kinase fold); InterPro IPR011009:IPR002575; KEGG: fra:Francci3_2376 hypothetical protein; PFAM: aminoglycoside phosphotransferase; SPTR: C1YQ84  homoserine kinase type II (protein kinase fold); PFAM: phosphotransferase enzyme family
YP_003681361.1	KEGG: similar to pharbin; K01099 phosphatidylinositol-bisphosphatase; SPTR: A3WXU5  uncharacterized protein
YP_003681362.1	KEGG: rec:RHECIAT_CH0002223 hypothetical protein; SPTR: D0XIJ6  uncharacterized protein
YP_003681363.1	KEGG: mpo:Mpop_3550 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; SPTR: C1YQ80  uncharacterized protein
YP_003681364.1	InterPro IPR011010:IPR010998:IPR013762; KEGG: fre:Franean1_6721 integrase family protein; SPTR: C1YQ79  uncharacterized protein
YP_003681365.1	InterPro IPR011047; KEGG: ami:Amir_3971 pyrrolo-quinoline quinone; SPTR: C1YQ76  uncharacterized protein
YP_003681366.1	KEGG: rha:RHA1_ro01718 hypothetical protein; SPTR: C1YQ75  uncharacterized protein
YP_003681367.1	KEGG: rha:RHA1_ro10023 hypothetical protein; SPTR: C1YQ74  uncharacterized protein
YP_003681368.1	KEGG: mmr:Mmar10_1224 organic solvent tolerance protein; SPTR: C1YQ73  uncharacterized protein
YP_003681369.1	KEGG: sen:SACE_4865 hypothetical protein; SPTR: C1YQ72  uncharacterized protein
YP_003681370.1	COGs: COG1063 threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013149:IPR016040:IPR011032:IPR013154; KEGG: rha:RHA1_ro03553 Zn-containing alcohol dehdyrogenase; PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; SPTR: C1YQ71 Theronine dehydrogenase-like Zn-dependent dehydrogenase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003681371.1	InterPro IPR011010:IPR002104:IPR013762; KEGG: fre:Franean1_6721 integrase family protein; PFAM: integrase family protein; SPTR: C1YQ70 Site-specific recombinase XerD; PFAM: Phage integrase family
YP_003681372.1	InterPro IPR016024; KEGG: mea:Mex_1p3568 hypothetical protein; SPTR: C1YQ69  uncharacterized protein
YP_003681373.1	InterPro IPR011009:IPR002575; KEGG: bcv:Bcav_2078 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: C1YQ68  homoserine kinase type II (protein kinase fold); PFAM: phosphotransferase enzyme family
YP_003681374.1	COGs: COG2890 methylase of polypeptide chain release factors; InterPro IPR002052:IPR004557:IPR007848; KEGG: kra:Krad_3360  methylase; PFAM: methyltransferase small; SPTR: C1YQ67 methyltransferase family protein; TIGRFAM: methylase; PFAM: methyltransferase small domain; TIGRFAM: HemK-related  methylase
YP_003681375.1	InterPro IPR018967:IPR006622; KEGG: sen:SACE_4173 hypothetical protein; PFAM: Iron sulphur domain-containing, CDGSH-type; SMART: zinc finger CDGSH-type domain protein; SPTR: C1YQ66 Iron-binding zinc finger protein, CDGSH type; PFAM: Iron-binding zinc finger CDGSH type
YP_003681376.1	InterPro IPR016084; KEGG: kra:Krad_3358 hypothetical protein; SPTR: C1YQ65  uncharacterized protein
YP_003681377.1	COGs: COG4301 conserved hypothetical protein; InterPro IPR019257; KEGG: gvi:glr1638 hypothetical protein; PFAM: protein of unknown function DUF2260; SPTR: C1YQ64 Uncharacterized conserved protein; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase
YP_003681378.1	InterPro IPR004843; KEGG: svi:Svir_20990 calcineurin-like phosphoesterase; PFAM: metallophosphoesterase; SPTR: C1YQ63 Calcineurin-like phosphoesterase; PFAM: Calcineurin-like phosphoesterase
YP_003681379.1	COGs: COG1695 transcriptional regulator protein; InterPro IPR005149:IPR011991; KEGG: sma:SAV_3228 PadR-family transcriptional regulator; PFAM: transcriptional regulator PadR family protein; SPTR: C1YQ60 transcriptional regulator, PadR family; PFAM: transcriptional regulator PadR-like family
YP_003681380.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: sco:SCO5035 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YQ59 ABC-type antimicrobial peptide transporter ATPase component; PFAM: ABC transporter
YP_003681381.1	InterPro IPR003838; KEGG: sgr:SGR_2499  integral membrane protein; PFAM: protein of unknown function DUF214; SPTR: C1YQ58 Predicted ABC-type transporter involved in lysophospholipase L1 biosynthesis, permease; PFAM: Predicted permease
YP_003681382.1	KEGG: cai:Caci_3311 hypothetical protein; SPTR: C1YQ56  uncharacterized protein
YP_003681383.1	COGs: COG0142 geranylgeranyl pyrophosphate synthase; InterPro IPR000092:IPR008949; KEGG: sco:SCO0565 polyprenyl synthetase; PFAM: polyprenyl synthetase; SPTR: C1YQ55 geranylgeranyl pyrophosphate synthase; PFAM: polyprenyl synthetase
YP_003681384.1	KEGG: sco:SCO0564 hypothetical protein; SPTR: C1YQ54  uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2236)
YP_003681385.1	COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: svi:Svir_18020 sugar kinase, ribokinase; PFAM: PfkB domain protein; SPTR: C1YQ53 Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase
YP_003681386.1	COGs: COG1737 transcriptional regulators; InterPro IPR000281:IPR001347; KEGG: sme:SMa0520 transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); SPTR: C1YQ52 transcriptional regulator; PFAM: Helix-turn-helix domain, rpiR family
YP_003681387.1	COGs: COG1840 ABC-type Fe3+ transporter periplasmic component; KEGG: sme:SMa0522 ABC transporter periplasmic solute-binding protein; SPTR: C1YQ51 ABC-type Fe3+ transporter periplasmic component; PFAM: Bacterial extracellular solute-binding protein
YP_003681388.1	COGs: COG1178 ABC-type Fe3+ transporter permease component; InterPro IPR000515; KEGG: sme:SMa0525 ABC transporter permease; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YQ50 ABC-type Fe3+ transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003681389.1	COGs: COG3839 ABC-type sugar transporters ATPase components; InterPro IPR017871:IPR003439:IPR003593; KEGG: sme:SMa0526 maltose/trehalose ABC transporter; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YQ49 carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter
YP_003681390.1	COGs: COG0406 fructose-2 6-bisphosphatase; InterPro IPR013078:IPR001345; KEGG: sme:SMa0527 phosphatase; PFAM: phosphoglycerate mutase; SMART: phosphoglycerate mutase; SPTR: C1YQ48 fructose-2,6-bisphosphatase; PFAM: phosphoglycerate mutase family
YP_003681391.1	COGs: COG0137 Argininosuccinate synthase; InterPro IPR018223:IPR001518; KEGG: sro:Sros_9344 argininosuccinate synthase; PFAM: argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: C1YQ47 Argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase
YP_003681392.1	InterPro IPR013216; KEGG: amr:AM1_G0071 methyltransferase, PFAM: methyltransferase type 11; SPTR: C1YQ46 methyltransferase family protein; PFAM: methyltransferase domain
YP_003681393.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR015358:IPR000551:IPR009061; KEGG: tfu:Tfu_1667 regulatory protein, MerR; PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; SPTR: C1YQ45 Predicted transcriptional regulator; PFAM: MerR family regulatory protein; MerR, DNA binding
YP_003681394.1	COGs: COG0659 sulfate permease and related transporter (MFS superfamily); InterPro IPR002645:IPR011547:IPR018045; KEGG: stp:Strop_1646 sulfate transporter; PFAM: sulfate transporter; sulfate transporter/antisigma-factor antagonist STAS; SPTR: C1YQ44 sulfate permease-like transporter MFS superfamily; PFAM: sulfate transporter family; STAS domain
YP_003681395.1	InterPro IPR001080:IPR010693; KEGG: svi:Svir_22740 ferredoxin; PFAM: protein of unknown function DUF1271; SPTR: C1YQ43 Ferredoxin; PFAM: protein of unknown function (DUF1271)
YP_003681396.1	InterPro IPR009057:IPR001647:IPR012287; KEGG: sen:SACE_2948 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YQ42 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003681397.1	COGs: COG2124 cytochrome P450; InterPro IPR017972:IPR001128:IPR002397:IPR017973; KEGG: svi:Svir_22720 cytochrome P450; PFAM: cytochrome P450; SPTR: C1YQ41 cytochrome P450; PFAM: cytochrome P450
YP_003681398.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: ami:Amir_2608 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YQ40  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003681399.1	InterPro IPR009057:IPR001647:IPR012287; KEGG: sgr:SGR_254 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YQ39 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003681400.1	InterPro IPR013517; KEGG: ach:Achl_0488 FG-GAP repeat protein; PFAM: FG-GAP repeat protein; SPTR: C1YQ38 FG-GAP repeat protein; PFAM: FG-GAP repeat
YP_003681401.1	COGs: COG1064 Zn-dependent alcohol dehydrogenase; InterProIPR013149:IPR016040:IPR011032:IPR002328:IPR 013154; KEGG: sco:SCO0259 alcohol dehydrogenase (zinc-binding); PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; SPTR: C1YQ37 Zn-dependent alcohol dehydrogenase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003681402.1	InterPro IPR002744; KEGG: sco:SCO0258 hypothetical protein; PFAM: protein of unknown function DUF59; SPTR: C1YQ36 Predicted metal-sulfur cluster biosynthetic enzyme; PFAM: Domain of unknown function DUF59
YP_003681403.1	COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: sco:SCO0257 hypothetical protein; PFAM: amidohydrolase; SPTR: C1YQ35 Predicted TIM-barrel fold metal-dependent hydrolase, COG2159; PFAM: Amidohydrolase
YP_003681404.1	COGs: COG3829 transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterPro IPR009057:IPR003018:IPR002078:IPR002197; KEGG: fra:Francci3_2288 Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SPTR: C1YQ34 Fis family transcriptional regulator with GAF domain; PFAM: Bacterial regulatory protein, Fis family
YP_003681405.1	KEGG: hmo:HM1_2778 peptidoglycan-binding domain protein, SPTR: C1YQ33  uncharacterized protein
YP_003681406.1	InterPro IPR003594; KEGG: cai:Caci_0014  signal transduction histidine kinase; SPTR: C1YQ32  uncharacterized protein
YP_003681407.1	InterPro IPR001387:IPR010982; KEGG: tfu:Tfu_0974 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YQ31 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003681408.1	InterPro IPR007278; KEGG: tfu:Tfu_0708 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YQ30  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003681409.1	KEGG: mxa:MXAN_3681 hypothetical protein; SPTR: C1YQ29  uncharacterized protein
YP_003681410.1	InterPro IPR006530; KEGG: sro:Sros_7436 rhs family protein-like protein; PFAM: hypotheticalprotein; SPTR: C1YQ28 Rhs family protein; TIGRFAM: hypothetical protein; PFAM: RHS Repeat; TIGRFAM: YD repeat (two copies)
YP_003681411.1	InterPro IPR008985; KEGG: sro:Sros_7437 hypothetical protein; SPTR: C1YQ27  uncharacterized protein
YP_003681412.1	COGs: COG3594 Fucose 4-O-acetylase and related acetyltransferase; InterPro IPR002656; KEGG: sro:Sros_0364 hypothetical protein; PFAM: acyltransferase; SPTR: C1YQ25 acetyltransferase, fucose-4-O-acetylase; PFAM: acyltransferase family
YP_003681413.1	COGs: COG1649 conserved hypothetical protein; InterPro IPR003790; KEGG: sro:Sros_5534 hypothetical protein; PFAM: protein of unknown function DUF187; SPTR: C1YQ24 Uncharacterized conserved protein; PFAM: Uncharacterised BCR, COG1649
YP_003681414.1	COGs: COG3537  alpha-1 2-mannosidase; InterPro IPR005887:IPR012939; KEGG: sma:SAV_2253 hypothetical protein; PFAM: glycosyl hydrolase 92; SPTR: C1YQ23 alpha-1,2-mannosidase, TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase
YP_003681415.1	COGs: COG4591 ABC-type transporter involved in lipoprotein release permease; InterPro IPR003838; KEGG: sro:Sros_4412 ABC-type transporter involved in lipoprotein release permease component-like protein; PFAM: protein of unknown function DUF214; SPTR: C1YQ22 ABC-type transporter involved in lipoprotein release, permease component; PFAM: Predicted permease
YP_003681416.1	KEGG: scl:sce4929 hypothetical protein; SPTR: C1YQ21  uncharacterized protein
YP_003681417.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: mlu:Mlut_21930 ABC-type antimicrobial peptide transporter ATPase component; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YQ20 ABC-type antimicrobial peptide transporter ATPase component; PFAM: ABC transporter
YP_003681418.1	COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR002173:IPR011611; KEGG: sro:Sros_3352 ribokinase family sugar kinase; PFAM: PfkB domain protein; SPTR: C1YQ19 Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase
YP_003681419.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: sen:SACE_3114 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YQ18  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003681420.1	COGs: COG2378 transcriptional regulator protein; InterPro IPR013196:IPR001034:IPR011991; KEGG: sro:Sros_6203 DeoR family transcriptional regulator; PFAM: hypothetical protein; SPTR: C1YQ17 Predicted transcriptional regulator, COG2378; PFAM: HTH domain
YP_003681421.1	KEGG: ami:Amir_4326 hypothetical protein; SPTR: C1YQ16  uncharacterized protein
YP_003681422.1	COGs: COG0815 Apolipoprotein N-acyltransferase; InterPro IPR003010; KEGG: sru:SRU_0260 apolipoprotein N-acyltransferase; PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: C1YQ15 Apolipoprotein N-acyltransferase; PFAM: carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase
YP_003681423.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: sco:SCO2359 two-component system sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; SPTR: C1YQ14 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003681424.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR011006:IPR016032:IPR001789:IPR000792:IPR 011991; KEGG: sco:SCO2358 two-component system response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; SPTR: C1YQ13 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003681425.1	COGs: COG3397 conserved hypothetical protein; InterPro IPR004302; KEGG: tfu:Tfu_1268  secreted cellulose-binding protein; PFAM: chitin-binding domain 3 protein; SPTR: C1YQ12 Uncharacterized conserved protein; PFAM: Chitin binding domain
YP_003681426.1	COGs: COG5297 cellobiohydrolase A (1 4-beta-cellobiosidase A); InterProIPR001524:IPR016288:IPR008965:IPR001919:IPR 012291:IPR017909; KEGG: tfu:Tfu_0620 cellobiohydrolase; PFAM: 1, 4-beta cellobiohydrolase; cellulose-binding family II; SMART: cellulose-binding family II; SPTR: C1YM82 cellobiohydrolase A (1,4-beta-cellobiosidase A); PFAM: cellulose binding domain; glycosyl hydrolases family 6
YP_003681427.1	COGs: COG0665 glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: rop:ROP_28470  sarcosine oxidase; PFAM: FAD dependent oxidoreductase; PRIAM: Sarcosine oxidase; SPTR: C1YVZ6 glycine/D-amino acid oxidase deaminating; PFAM: FAD dependent oxidoreductase; TIGRFAM: sarcosine oxidase monomeric form
YP_003681428.1	COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198:IPR016040:IPR002347; KEGG: sen:SACE_4214  dehydrogenase related to short-chain alcohol dehydrogenases; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YVZ5  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003681429.1	InterPro IPR004360; KEGG: aau:AAur_1135  glyoxalase family protein; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YVZ4 Predicted lactoylglutathione lyase; PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003681430.1	KEGG: tcu:Tcur_2792 hypothetical protein; SPTR: C1YVZ3  uncharacterized protein
YP_003681431.1	COGs: COG2329 Uncharacterized protein involved in biosynthesis of extracellular polysaccharides; InterPro IPR011008:IPR007138; KEGG: tfu:Tfu_0619 hypothetical protein; PFAM: antibiotic biosynthesis monooxygenase; SPTR: C1YVZ2 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides; PFAM: antibiotic biosynthesis monooxygenase
YP_003681432.1	InterPro IPR013216; KEGG: sen:SACE_5163 hypothetical protein; PFAM: methyltransferase type 11; SPTR: C1YVZ1 methyltransferase family protein; PFAM: methyltransferase domain
YP_003681433.1	COGs: COG3135 Uncharacterized protein involved in benzoate metabolism; InterPro IPR004711; KEGG: app:CAP2UW1_2446 benzoate transporter; PFAM: Benzoate membrane transporter; SPTR: C1YVZ0 Benzoate transporter; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; TIGRFAM: benzoate transporter
YP_003681434.1	InterPro IPR016181:IPR000182; KEGG: sgr:SGR_1429 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YVY9 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003681435.1	InterPro IPR002934; KEGG: sco:SCO1986 hypothetical protein; PFAM: DNA polymerase beta domain protein region; SPTR: C1YVY8 nucleotidyltransferase family protein; PFAM: nucleotidyltransferase domain
YP_003681436.1	COGs: COG2311 membrane protein; InterPro IPR007299:IPR007349; KEGG: sro:Sros_8135 hypothetical protein; PFAM: protein of unknown function DUF418; protein of unknown function DUF405; SPTR: C1YVY7 Predicted membrane protein, COG2311; PFAM: protein of unknown function (DUF418)
YP_003681437.1	InterPro IPR001647:IPR009057; KEGG: sro:Sros_8134 hypothetical protein; PFAM: regulatory protein TetR; SPTR: C1YVY6 transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003681438.1	COGs: COG3231 aminoglycoside phosphotransferase; InterPro IPR011009:IPR002575; KEGG: dge:Dgeo_2256 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: C1YVY5 aminoglycoside phosphotransferase; PFAM: phosphotransferase enzyme family
YP_003681439.1	COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: svi:Svir_13950 choline/carnitine/betaine transport; PFAM: BCCT transporter; SPTR: C1YVY4 Choline/carnitine/betaine transport; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport
YP_003681440.1	KEGG: sro:Sros_4695 hypothetical protein; SPTR: C1YVY3 Predicted hydrolase or acyltransferase of alpha/beta superfamily
YP_003681441.1	COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR018170:IPR001395:IPR020471; KEGG: sgr:SGR_1126  oxidoreductase; PFAM: aldo/keto reductase; PRIAM: 2,5-didehydrogluconate reductase; SPTR: C1YVY2 Aldo/keto reductase, diketogulonate reductase; PFAM: Aldo/keto reductase family
YP_003681442.1	COGs: COG2130  NADP-dependent oxidoreductase; InterPro IPR016040:IPR013149:IPR011032; KEGG: cai:Caci_1158 alcohol dehydrogenase zinc-binding domain protein; PFAM: alcohol dehydrogenase zinc-binding domain protein; SPTR: C1YVY1 Predicted NADP-dependent oxidoreductase; PFAM: Zinc-binding dehydrogenase
YP_003681443.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: sma:SAV_4773 LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: C1YVY0 transcriptional regulator, COG0583; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_003681444.1	COGs: COG3021 conserved hypothetical protein; InterPro IPR005135; KEGG: ami:Amir_0337 endonuclease/exonuclease/phosphatase; PFAM: endonuclease/exonuclease/phosphatase; SPTR: C1YVX9 Uncharacterized conserved protein; PFAM: endonuclease/exonuclease/phosphatase family
YP_003681445.1	COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048; KEGG: rxy:Rxyl_0369 luciferase-like protein; PFAM: Luciferase-like, subgroup; SPTR: C1YVX8 Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like monooxygenase
YP_003681446.1	KEGG: tcu:Tcur_1784 hypothetical protein; SPTR: C1YVX7  uncharacterized protein
YP_003681447.1	COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR006402:IPR006439:IPR005834:IPR005833; KEGG: yen:YE1337  phosphatase; PFAM: haloacid dehalogenase; SPTR: C1YVX6 Haloacid dehalogenase superfamily enzyme, subfamily IA; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_003681448.1	InterPro IPR016181:IPR000182; KEGG: sco:SCO3913 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YVX5 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003681449.1	KEGG: GA22202 gene product from transcript GA22202-RA; SPTR: B5DU07 GA22202
YP_003681450.1	COGs: COG2226 methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: smt:Smal_1725 methyltransferase type 11; PFAM: methyltransferase type 11; SPTR: C1YVX4 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain
YP_003681451.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR018062:IPR000005:IPR012287:IPR018060:IPR 009057; KEGG: tcu:Tcur_1362 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C1YVX3 DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003681452.1	COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: cai:Caci_8402 NmrA family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YVX2 Predicted nucleoside-diphosphate sugar epimerase
YP_003681453.1	COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR018107:IPR001991; KEGG: ami:Amir_5694 sodium:dicarboxylate symporter; PFAM: sodium:dicarboxylate symporter; SPTR: C1YVX1 Na+/H+ dicarboxylate symporter (Fragment); PFAM: Sodium:dicarboxylate symporter family
YP_003681454.1	KEGG: sgr:SGR_616 hypothetical protein; SPTR: C1YR30  uncharacterized protein
YP_003681455.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR016196; KEGG: sma:SAV_1555 integral membrane protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YR29 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003681456.1	COGs: COG4977 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR009057:IPR002818:IPR000005:IPR018060; KEGG: sen:SACE_7232 AraC family transcription regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: Helix-turn-helix, AraC domain; SPTR: C1YR28 AraC family transcriptional regulator with amidase-like domain; PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003681457.1	KEGG: tfu:Tfu_0953 hypothetical protein; SPTR: C1YR27  uncharacterized protein
YP_003681458.1	COGs: COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; InterPro IPR002035; KEGG: gbr:Gbro_0384 von Willebrand factor type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: C1YR26 Uncharacterized protein containing a von Willebrand factor type A (VWA) domain; PFAM: von Willebrand factor type A domain
YP_003681459.1	COGs: COG3336 membrane protein; InterPro IPR019108; KEGG: mlu:Mlut_21060 predicted membrane protein; PFAM: cytochrome C oxidase caa3-type, assembly factor CtaG-related; SPTR: C1YR25 Predicted membrane protein, COG3336; PFAM: cytochrome C oxidase caa3 assembly factor (Caa3_CtaG)
YP_003681460.1	COGs: COG4329 membrane protein; InterPro IPR018719; KEGG: gym:GYMC10_2939 protein of unknown function DUF2243, membrane; PFAM: protein of unknown function DUF2243, membrane; SPTR: C1YR24 Predicted membrane protein, COG4329; PFAM: Predicted membrane protein (DUF2243)
YP_003681461.1	COGs: COG3685 conserved hypothetical protein; InterPro IPR009078:IPR010287; KEGG: bvi:Bcep1808_5182 hypothetical protein; PFAM: protein of unknown function DUF892; SPTR: C1YR23 Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF892)
YP_003681462.1	COGs: COG4336 conserved hypothetical protein; InterPro IPR016938:IPR009906; KEGG: sen:SACE_1553 hypothetical protein; PFAM: protein of unknown function DUF1445; SPTR: C1YR22 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF1445)
YP_003681463.1	COGs: COG1984 allophanate hydrolase subunit 2; InterPro IPR003778; KEGG: tfu:Tfu_1968 allophanate hydrolase subunit 2; PFAM: allophanate hydrolase subunit 2; PRIAM: Urea carboxylase; SMART: allophanate hydrolase subunit 2; SPTR: C1YR21 Biotin-dependent carboxylase-like protein; TIGRFAM: urea amidolyase; PFAM: allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain
YP_003681464.1	COGs: COG2049 allophanate hydrolase subunit 1; InterPro IPR003833; KEGG: tfu:Tfu_1969 hypothetical protein; PFAM: allophanate hydrolase subunit 1; SMART: allophanate hydrolase subunit 1; SPTR: C1YR20 allophanate hydrolase subunit 1; PFAM: allophanate hydrolase subunit 1; TIGRFAM: conserved hypothetical protein TIGR00370
YP_003681465.1	COGs: COG1540 conserved hypothetical protein; InterPro IPR005501; KEGG: tfu:Tfu_1970 LamB/YcsF family protein; PFAM: LamB/YcsF family protein; SPTR: C1YR19 Uncharacterized lactam utilization protein B-like protein; PFAM: LamB/YcsF family
YP_003681466.1	COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; KEGG: sen:SACE_1549 hypothetical protein; SPTR: C1YR18 Mn2+/Fe2_transporter NRAMP family; PFAM: Natural resistance-associated macrophage protein
YP_003681467.1	COGs: COG1802 transcriptional regulators; InterPro IPR000524:IPR011711:IPR011991; KEGG: sen:SACE_1548 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR family transcriptional regulator; SMART: regulatory protein GntR HTH; SPTR: C1YR17 transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003681468.1	KEGG: svi:Svir_03420 hypothetical protein; SPTR: C1YR16  uncharacterized protein
YP_003681469.1	InterPro IPR013216; KEGG: rha:RHA1_ro05023 hypothetical protein; PFAM: methyltransferase type 11; SPTR: C1YR15 methyltransferase family protein; PFAM: methyltransferase domain
YP_003681470.1	COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: fra:Francci3_3082 hypothetical protein; PFAM: aminotransferase class IV; SPTR: C1YR14 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; PFAM: aminotransferase class IV
YP_003681471.1	COGs: COG2409 drug exporter of the RND superfamily; InterPro IPR004869:IPR000731; KEGG: tfu:Tfu_2997 hypothetical protein; PFAM: MMPL domain protein; SPTR: C1YR13 Predicted RND superfamily drug exporter; PFAM: MMPL family; TIGRFAM: transporter
YP_003681472.1	COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030:IPR016040; KEGG: sgr:SGR_6547  oxidoreductase; PFAM: NmrA family protein; SPTR: C1YR12 Predicted nucleoside-diphosphate sugar epimerase; PFAM: protein of unknown function (DUF2867); NmrA-like family
YP_003681473.1	KEGG: sgr:SGR_818 hypothetical protein; SPTR: C1YR11  uncharacterized protein
YP_003681474.1	InterPro IPR009061:IPR000551; KEGG: sgr:SGR_817 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YR10 Predicted transcriptional regulator; PFAM: MerR family regulatory protein
YP_003681475.1	InterPro IPR008671; KEGG: tfu:Tfu_3088  lycopene cyclase; PFAM: Lycopene beta and epsilon cyclase; SPTR: C1YR09 Flavin-dependent dehydrogenase; PFAM: Lycopene cyclase protein; TIGRFAM: lycopene cyclase family protein
YP_003681476.1	COGs: COG2226 methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: tfu:Tfu_3089  methyltransferase; PFAM: methyltransferase type 11; SPTR: C1YR08 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: ubiE/COQ5 methyltransferase family
YP_003681477.1	COGs: COG3349 conserved hypothetical protein; InterPro IPR002937:IPR000759; KEGG: tfu:Tfu_3090  beta-carotene desaturase/methylase; PFAM: amine oxidase; SPTR: C1YR07 Uncharacterized conserved protein; PFAM: Flavin containing amine oxidoreductase
YP_003681478.1	COGs: COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenase large terminal subunit; InterPro IPR017941; KEGG: tfu:Tfu_3077  methylesterase; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: C1YR06 Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] domain
YP_003681479.1	COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR008949:IPR019845:IPR002060; KEGG: tfu:Tfu_3076 phytoene synthase; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: C1YR05 Phytoene synthase; PFAM: Squalene/phytoene synthase
YP_003681480.1	COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR008150:IPR014105:IPR002937; KEGG: tfu:Tfu_3075  phytoene desaturase; PFAM: amine oxidase; SPTR: C1YR04 UDP-galactopyranose mutase; TIGRFAM: phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase
YP_003681481.1	COGs: COG0142 geranylgeranyl pyrophosphate synthase; InterPro IPR000092:IPR008949; KEGG: sen:SACE_1714 geranylgeranyl pyrophosphate synthase; PFAM: polyprenyl synthetase; SPTR: C1YR03 geranylgeranyl pyrophosphate synthase; PFAM: polyprenyl synthetase
YP_003681482.1	COGs: COG1846 transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: tcu:Tcur_3979 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YR02 transcriptional regulator; PFAM: MarR family
YP_003681483.1	COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: sen:SACE_2490 choline/carnitine/betaine transporter; PFAM: BCCT transporter; SPTR: C1YR01 Choline/carnitine/betaine transport; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport
YP_003681484.1	COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR008978:IPR002068; KEGG: rxy:Rxyl_0675 heat shock protein HSP20; PFAM: heat shock protein Hsp20; SPTR: C1YR00 Molecular chaperone (Small heat shock protein); PFAM: Hsp20/alpha crystallin family
YP_003681485.1	COGs: COG2847 conserved hypothetical protein; InterPro IPR007410; KEGG: tcu:Tcur_2986 protein of unknown function DUF461; PFAM: protein of unknown function DUF461; SPTR: C1YQZ9 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF461)
YP_003681486.1	COGs: COG2837 iron-dependent peroxidase; InterPro IPR006314:IPR017909:IPR006311; KEGG: sro:Sros_3398 Dyp-type peroxidase; PFAM: Dyp-type peroxidase; SPTR: C1YQZ8 Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family; Tat-translocated enzyme; Tat (twin-arginine translocation) pathway signal sequence
YP_003681487.1	KEGG: tfu:Tfu_3081 hypothetical protein; SPTR: C1YQZ7  uncharacterized protein
YP_003681488.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013324:IPR013249:IPR013325:IPR014284:IPR 007627; KEGG: sro:Sros_3479 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: C1YQZ6 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003681489.1	COGs: COG0612 Zn-dependent peptidase; InterProIPR011249:IPR011765:IPR007863:IPR011237:IPR 001431; KEGG: tfu:Tfu_0785 mitochondrial processing peptidase; PFAM: peptidase M16 domain protein; SPTR: C1YQZ5 Predicted Zn-dependent peptidase; PFAM: peptidase M16 inactive domain; Insulinase (peptidase family M16)
YP_003681490.1	COGs: COG1185 polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); InterProIPR015847:IPR020568:IPR012162:IPR015848:IPR 014069:IPR012340:IPR016027:IPR003029:IPR004088:IPR018111:I PR001247:IPR004087; KEGG: tfu:Tfu_0784 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; K Homology, type 1, subgroup; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; polynucleotide phosphorylase, phosphorolytic RNA-binding; PRIAM: polyribonucleotide nucleotidyltransferase; SMART: KH domain protein; SPTR: C1YQZ4 Guanosine pentaphosphate synthetase I/polynucleotide phosphorylase; TIGRFAM: guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; polyribonucleotide nucleotidyltransferase; PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
YP_003681491.1	COGs: COG0184 ribosomal protein S15P/S13E; InterPro IPR000589:IPR009068:IPR005290; KEGG: tfu:Tfu_0783 30S ribosomal protein S15; PFAM: ribosomal protein S15; SPTR: C1YQZ3 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle
YP_003681492.1	COGs: COG0196 FAD synthase; InterProIPR015865:IPR004821:IPR002606:IPR015864:IPR 014729; KEGG: tcu:Tcur_3326 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; riboflavin kinase; SPTR: C1YQZ2 riboflavin kinase; FMN adenylyltransferase; TIGRFAM: riboflavin biosynthesis protein RibF; cytidyltransferase-related domain protein; PFAM: riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; cytidyltransferase-related domain
YP_003681493.1	KEGG: rop:ROP_29420 hypothetical protein; SPTR: C1YQZ1  uncharacterized protein
YP_003681494.1	InterPro IPR003756:IPR006442; KEGG: fra:Francci3_2678 prevent-host-death protein; PFAM: protein of unknown function DUF172; SPTR: C1YQZ0 Prevent-host-death family protein; TIGRFAM: prevent-host-death family protein; PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein
YP_003681495.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639:IPR000073; KEGG: sro:Sros_9212 alpha/beta hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YQY9 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003681496.1	COGs: COG0130 Pseudouridine synthase; InterProIPR015225:IPR014780:IPR002501:IPR015947:IPR 020103; KEGG: tfu:Tfu_0781 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II; SPTR: C1YQY8 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: tRNA Pseudouridine synthase II, C terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
YP_003681497.1	COGs: COG0858 ribosome-binding factor A; InterPro IPR000238:IPR015946:IPR020053; KEGG: tfu:Tfu_0780 ribosome-binding factor A; PFAM: ribosome-binding factor A; SPTR: C1YQY7 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; TIGRFAM: ribosome-binding factor A
YP_003681498.1	COGs: COG1550 conserved hypothetical protein; InterPro IPR007546; KEGG: tfu:Tfu_0779 hypothetical protein; PFAM: protein of unknown function DUF503; SPTR: C1YQY6 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF503)
YP_003681499.1	COGs: COG0532 translation initiation factor 2 (IF-2; GTPase); InterProIPR000178:IPR009000:IPR005225:IPR006847:IPR 000795:IPR004161; KEGG: tfu:Tfu_0778 translation initiation factor IF-2; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; elongation factor Tu domain 2 protein; SPTR: C1YQY5 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; translation-initiation factor 2; translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2
YP_003681500.1	COGs: COG0195 transcription elongation factor; InterProIPR015946:IPR003029:IPR004088:IPR013735:IPR 009019:IPR010213:IPR004087:IPR016027; KEGG: tfu:Tfu_0776 transcription elongation factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein; SMART: KH domain protein; SPTR: C1YQY4 transcription termination factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: NusA family KH domain protein, archaeal; transcription termination factor NusA
YP_003681501.1	InterPro IPR003728; KEGG: tfu:Tfu_0775 hypothetical protein; PFAM: protein of unknown function DUF150; SPTR: C1YQY3 Uncharacterized conserved protein; PFAM: Uncharacterised BCR, YhbC family COG0779
YP_003681502.1	KEGG: tfu:Tfu_0774 hypothetical protein; SPTR: C1YQY2  uncharacterized protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003681503.1	KEGG: tfu:Tfu_0773 hypothetical protein; SPTR: C1YQY1  uncharacterized protein
YP_003681504.1	COGs: COG0442 prolyl-tRNA synthetase; InterProIPR010916:IPR004154:IPR007214:IPR004500:IPR 002314:IPR006195:IPR002316; KEGG: tfu:Tfu_0772 prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; anticodon-binding domain protein; PRIAM: proline--tRNA ligase; SPTR: C1YQY0 prolyl-tRNA synthetase, family II; TIGRFAM: prolyl-tRNA synthetase; PFAM: YbaK / prolyl-tRNA synthetases associated domain; anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II
YP_003681505.1	COGs: COG0421 Spermidine synthase; KEGG: tfu:Tfu_0771 hypothetical protein; SPTR: C1YQX9  uncharacterized protein; PFAM: Spermine/spermidine synthase
YP_003681506.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: tfu:Tfu_0768  two-component system sensor kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C1YQX8 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003681507.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR011006:IPR001789:IPR000792:IPR011991; KEGG: tfu:Tfu_0767 LuxR response regulator receiver; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YQX7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003681508.1	COGs: COG1271 cytochrome bd-type quinol oxidase subunit 1; InterPro IPR002585; KEGG: tfu:Tfu_0766 highly cytochrome d ubiquinol oxidase subunit I; PFAM: cytochrome bd ubiquinol oxidase subunit I; SPTR: C1YQX6 cytochrome bd-type quinol oxidase subunit 1; PFAM: Bacterial cytochrome Ubiquinol Oxidase
YP_003681509.1	COGs: COG1294 cytochrome bd-type quinol oxidase subunit 2; InterPro IPR003317; KEGG: tfu:Tfu_0765  cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; SPTR: C1YQX5 cytochrome bd-type quinol oxidase subunit 2; PFAM: cytochrome oxidase subunit II
YP_003681510.1	KEGG: tcu:Tcur_0114 hypothetical protein; SPTR: C1YQX4  uncharacterized protein
YP_003681511.1	KEGG: tfu:Tfu_0762 hypothetical protein; SPTR: C1YQX3  uncharacterized protein
YP_003681512.1	COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); InterProIPR000185:IPR011130:IPR011115:IPR011116:IPR 014018; KEGG: tfu:Tfu_0761 preprotein translocase subunit SecA; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SPTR: C1YQX2 protein translocase subunit secA; PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SecA Wing and Scaffold domain
YP_003681513.1	COGs: COG2229 GTPase; InterPro IPR004130; KEGG: tfu:Tfu_0760  ATP/GTP-binding protein; PFAM: protein of unknown function ATP binding; SPTR: C1YQX1 Predicted GTPase, COG2229; PFAM: Conserved hypothetical ATP binding protein
YP_003681514.1	COGs: COG0124 Histidyl-tRNA synthetase; InterProIPR004154:IPR015807:IPR004516:IPR002314:IPR 006195; KEGG: tfu:Tfu_0759 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); anticodon-binding domain protein; PRIAM: histidine--tRNA ligase; SPTR: C1YQX0 Histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase
YP_003681515.1	COGs: COG3903 ATPase; InterProIPR000792:IPR000767:IPR011991:IPR013026:IPR 016032; KEGG: tfu:Tfu_0758 regulatory protein, LuxR; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: C1YQW9 Predicted ATPase, COG3903; PFAM: Bacterial regulatory proteins, luxR family; NB-ARC domain
YP_003681516.1	COGs: COG3903 ATPase; InterProIPR016032:IPR000792:IPR011991:IPR019734:IPR 000767; KEGG: tfu:Tfu_0757 TPR repeat-containing regulatory protein LuxR; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; Tetratricopeptide repeat; SPTR: C1YQW8 Predicted ATPase, COG3903; PFAM: Bacterial regulatory proteins, luxR family
YP_003681517.1	InterPro IPR000873; KEGG: tfu:Tfu_0756 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YQW7 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme
YP_003681518.1	InterPro IPR003594; KEGG: tfu:Tfu_0755  regulatory protein; PFAM: ATP-binding region ATPase domain protein; SPTR: C1YQW6 anti-sigma regulatory factor (Ser/Thr protein kinase)
YP_003681519.1	COGs: COG3640 CO dehydrogenase maturation factor; KEGG: tfu:Tfu_0754  ATP-binding protein; SPTR: C1YQW5 CO dehydrogenase maturation factor; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_003681520.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR004812:IPR016196; KEGG: bay:RBAM_006000 YdgK; PFAM: major facilitator superfamily MFS_1; SPTR: C1YQW4 Drug resistance transporter Bcr/CflA subfamily; TIGRFAM: drug resistance transporter Bcr/CflA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter Bcr/CflA subfamily; Multidrug resistance protein
YP_003681521.1	COGs: COG3393 acetyltransferase; InterPro IPR000182:IPR016181:IPR016794; KEGG: tfu:Tfu_0751 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YQW3 Predicted acyltransferase, COG3393; PFAM: acetyltransferase (GNAT) family
YP_003681522.1	InterPro IPR013595; KEGG: tfu:Tfu_0750  secreted peptidase; PFAM: TAP domain protein; SPTR: C1YQW2 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003681523.1	COGs: COG1522 transcriptional regulators; InterProIPR011991:IPR011008:IPR019885:IPR019887:IPR 019888:IPR000485; KEGG: sro:Sros_2332  transcriptional regulator, AsnC family; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type; SPTR: C1YQW1 transcriptional regulator, AsnC family; PFAM: IclR helix-turn-helix domain; AsnC family
YP_003681524.1	COGs: COG1231 Monoamine oxidase; InterPro IPR002937; KEGG: sgr:SGR_6070  amino oxidase; PFAM: amine oxidase; SPTR: C1YQW0 Monoamine oxidase; PFAM: Flavin containing amine oxidoreductase
YP_003681525.1	COGs: COG0388 amidohydrolase; InterPro IPR001969:IPR001110:IPR003010; KEGG: cai:Caci_8156 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: C1YQV9 Predicted amidohydrolase; PFAM: carbon-nitrogen hydrolase
YP_003681526.1	COGs: COG0531 amino acid transporter; InterPro IPR002293:IPR004841:IPR003544; KEGG: sco:SCO1459 amino acid transporter; PFAM: amino acid permease-associated region; SPTR: C1YQV8 amino acid transporter; PFAM: amino acid permease; TIGRFAM: amino acid transporter
YP_003681527.1	InterPro IPR015035; KEGG: tcu:Tcur_1645 domain of unknown function DUF1918; PFAM: Domain of unknown function DUF1918; SPTR: C1YQV7  uncharacterized protein; PFAM: Domain of unknown function (DUF1918)
YP_003681528.1	KEGG: amr:AM1_0905 hypothetical protein; SPTR: C1YQV6  uncharacterized protein
YP_003681529.1	COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; InterPro IPR011005:IPR004588:IPR016425; KEGG: tfu:Tfu_0749 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: IspG family protein; PRIAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; SPTR: C1YQV5 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
YP_003681530.1	COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR008915:IPR001478; KEGG: tfu:Tfu_0748 PDZ/DHR/GLGF; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; SPTR: C1YQV4 Predicted membrane-associated Zn-dependent protease; PFAM: peptidase family M50; TIGRFAM: RIP metalloprotease RseP
YP_003681531.1	COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro IPR016040:IPR003821:IPR013512:IPR013644; KEGG: tfu:Tfu_0747 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; PRIAM: 1-deoxy-D-xylulose-5-phosphate reductoisomerase; SPTR: C1YQV3 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
YP_003681532.1	COGs: COG2936 acyl esterase; InterPro IPR008979:IPR005674:IPR000383:IPR013736; KEGG: tfu:Tfu_0746 hypothetical protein; PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; SPTR: C1YQV2  hydrolase, CocE/NonD family; TIGRFAM: hydrolase CocE/NonD family protein; PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM:  hydrolase, CocE/NonD family
YP_003681533.1	InterPro IPR018114:IPR009003; KEGG: tfu:Tfu_0745 hypothetical protein; SPTR: C1YQV1  uncharacterized protein; PFAM: Trypsin
YP_003681534.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016161:IPR015590:IPR016162:IPR016160; KEGG: tfu:Tfu_0744 aldehyde dehydrogenase (NAD+); PFAM: aldehyde dehydrogenase; SPTR: C1YQV0 NAD-dependent aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase family
YP_003681535.1	KEGG: tfu:Tfu_0743 hypothetical protein; SPTR: C1YQU9  uncharacterized protein
YP_003681536.1	KEGG: ara:Arad_8469 hypothetical protein; SPTR: C1YQU8  uncharacterized protein
YP_003681537.1	KEGG: art:Arth_0546 hypothetical protein; SPTR: C1YQU7  uncharacterized protein
YP_003681538.1	InterPro IPR007263; KEGG: sen:SACE_6525 hypothetical protein; PFAM:  thiol-disulphide oxidoreductase DCC; SPTR: C1YQU6 Uncharacterized conserved protein; PFAM: protein of unknown function, DUF393
YP_003681539.1	COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transporter ATPase component; InterProIPR010066:IPR003439:IPR017871:IPR003593:IPR 013563; KEGG: sgr:SGR_2037  dipeptide ABC transporter ATP-binding protein; PFAM: ABC transporter related; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; SPTR: C1YQU4 oligopeptide/dipeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter ATP-binding protein, C-terminal domain
YP_003681540.1	COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transporter ATPase component; InterProIPR010066:IPR003439:IPR017871:IPR003593:IPR 013563; KEGG: sgr:SGR_2038  dipeptide ABC transporter ATP-binding protein; PFAM: ABC transporter related; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; SPTR: C1YQU3 ABC-type dipeptide/oligopeptide/nickel transporter ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region
YP_003681541.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: sgr:SGR_2039  dipeptide ABC transporter permease; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YQU2 ABC-type dipeptide/oligopeptide/nickel transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003681542.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: sgr:SGR_2040  dipeptide ABC transporter permease; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YQU1 ABC-type dipeptide/oligopeptide/nickel transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003681543.1	COGs: COG0747 ABC-type dipeptide transporter periplasmic component; InterPro IPR000914; KEGG: sgr:SGR_2041  dipeptide ABC transporter substrate-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: C1YQU0 ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_003681544.1	KEGG: hypothetical protein; SPTR: C1YQT9  uncharacterized protein
YP_003681545.1	COGs: COG3265 gluconate kinase; InterPro IPR006001:IPR000623; KEGG: tfu:Tfu_2114 gluconate kinase; PFAM: shikimate kinase; PRIAM: gluconokinase; SPTR: C1YQT8 gluconate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family
YP_003681546.1	COGs: COG2186 transcriptional regulators; InterPro IPR011711:IPR000524:IPR011991; KEGG: sen:SACE_3357 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: GntR domain protein; SPTR: C1YQT7 GntR family transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003681547.1	COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: kra:Krad_3894 gluconate transporter; PFAM: gluconate transporter; SPTR: C1YQT6 gluconate transporter; TIGRFAM: gluconate transporter; PFAM: GntP family permease; TIGRFAM: gluconate transporter
YP_003681548.1	KEGG: cai:Caci_6920 hypothetical protein; SPTR: C1YQT5  uncharacterized protein
YP_003681549.1	COGs: COG2319 FOG: WD40 repeat; InterProIPR019775:IPR011046:IPR011600:IPR019781:IPR 015943:IPR019782:IPR017986:IPR001680:IPR020472; KEGG: sgr:SGR_686 WD repeat-containing protein; PFAM: peptidase C14 caspase catalytic subunit p20; WD40 repeat, subgroup; SMART: hypothetical protein; SPTR: C1YQT4 WD-40 repeat-containing protein; PFAM: Caspase domain; WD domain, G-beta repeat
YP_003681550.1	InterPro IPR002818; KEGG: sro:Sros_2155 ThiJ/PfpI domain protein; PFAM: ThiJ/PfpI domain protein; SPTR: C1YQT3 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; PFAM: DJ-1/PfpI family
YP_003681551.1	InterPro IPR000835:IPR011991; KEGG: sgr:SGR_3384 MarR family transcriptional regulator; SMART: regulatory protein MarR; SPTR: C1YQT2 transcriptional regulator; PFAM: IclR helix-turn-helix domain
YP_003681552.1	COGs: COG2008 threonine aldolase; InterPro IPR015424:IPR015422:IPR001597:IPR015421; KEGG: scl:sce2044 hypothetical protein; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; PRIAM: threonine aldolase; SPTR: C1YQT1 threonine aldolase; PFAM: beta-eliminating lyase
YP_003681553.1	COGs: COG1414 transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: saq:Sare_4608 IclR family transcriptional regulator; PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; SPTR: C1YQT0 IclR family transcriptional regulator; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_003681554.1	COGs: COG0554 glycerol kinase; InterPro IPR018483:IPR018485:IPR005999:IPR018484; KEGG: tfu:Tfu_0787 glycerol kinase; PFAM: carbohydrate kinase, FGGY-like; SPTR: C1YQS9 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase
YP_003681555.1	COGs: COG0580 glycerol uptake facilitator and related permease (Major Intrinsic protein Family); InterPro IPR000425:IPR012269; KEGG: rxy:Rxyl_1065 MIP family channel protein; PFAM: major intrinsic protein; SPTR: C1YQS8 MIP family channel protein; TIGRFAM: MIP family channel protein; PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins
YP_003681556.1	COGs: COG0578 glycerol-3-phosphate dehydrogenase; InterPro IPR000447:IPR006076; KEGG: sgr:SGR_5843  glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: C1YQS7 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_003681557.1	COGs: COG1278 Cold shock protein; InterProIPR016027:IPR012156:IPR002059:IPR012340:IPR 011129; KEGG: msm:MSMEG_0559 hypothetical protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: C1YQS6 Cold-shock DNA-binding protein family; PFAM: 'Cold-shock' DNA-binding domain
YP_003681558.1	COGs: COG1123 ATPase components of various ABC-type transporters contain duplicated ATPase; InterPro IPR003439:IPR013563:IPR017871:IPR003593; KEGG: tfu:Tfu_0914 ABC-type oligopeptide transporter ATPase component; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; SPTR: C1YR42 ATPase component of various ABC-type transporters with duplicated ATPase domain; PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region
YP_003681559.1	COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transporter ATPase component; InterProIPR010066:IPR003439:IPR017871:IPR003593:IPR 013563; KEGG: tfu:Tfu_0913 oligopeptide/dipeptide ABC transporter ATP-binding protein; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; SPTR: C1YR41 oligopeptide/dipeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter ATP-binding protein, C-terminal domain
YP_003681560.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: tfu:Tfu_0912 ABC-type dipeptide/oligopeptide/nickel transporters, permease components; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YR40 ABC-type dipeptide/oligopeptide/nickel transport system, permease; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003681561.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: tfu:Tfu_0911 ABC-type dipeptide/oligopeptide/nickel transporters, permease components; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YR39 ABC-type dipeptide/oligopeptide/nickel transport system, permease; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003681562.1	COGs: COG0747 ABC-type dipeptide transporter periplasmic component; InterPro IPR000914; KEGG: xce:Xcel_0262 extracellular solute-binding protein family 5; PFAM: extracellular solute-binding protein family 5; SPTR: C1YR36 extracellular solute-binding protein, family 5; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_003681563.1	COGs: COG1609 transcriptional regulators; InterPro IPR010982:IPR000843:IPR001761; KEGG: scl:sce0662 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: C1YR35 LacI family transcriptional regulator; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003681564.1	COGs: COG0266 Formamidopyrimidine-DNA glycosylase; InterProIPR010979:IPR012319:IPR015886:IPR015887:IPR 000214; KEGG: tfu:Tfu_0694  DNA repair hydrolase; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SPTR: C1YR34 DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS
YP_003681565.1	COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: tfu:Tfu_0693 superfamily protein I DNA/RNA helicase; SPTR: C1YR33  uncharacterized protein
YP_003681566.1	COGs: COG2508 Regulator of polyketide synthase expression; InterPro IPR002197:IPR012914; KEGG: tfu:Tfu_0691 helix-turn-helix, fis-type; PFAM: purine catabolism PurC domain protein; helix-turn-helix Fis-type; SPTR: C1YR32 Regulator of polyketide synthase expression; PFAM: Purine catabolism regulatory protein-like family
YP_003681567.1	COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR004632:IPR015424:IPR005814:IPR015421; KEGG: tfu:Tfu_0690 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; SPTR: C1YR31 4-aminobutyrate aminotransferase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type
YP_003681568.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: sen:SACE_4400 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: C1YU71 transcriptional regulator, COG0583; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_003681569.1	COGs: COG2851 H+/citrate symporter; InterPro IPR004680:IPR014738; KEGG: svi:Svir_18490 citrate transporter CitMHS family; PFAM: citrate transporter; SPTR: C1YU70 citrate transporter CitMHS family; TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: citrate transporter; TIGRFAM: citrate transporter CitMHS family
YP_003681570.1	InterPro IPR010839; KEGG: mno:Mnod_3689 protein of unknown function DUF1446; PFAM: protein of unknown function DUF1446; SPTR: C1YU69  uncharacterized protein; PFAM: protein of unknown function (DUF1446)
YP_003681571.1	KEGG: bbt:BBta_2933 hypothetical protein; SPTR: C1YU68  uncharacterized protein
YP_003681572.1	InterPro IPR012914; KEGG: tfu:Tfu_0685 CdaR family transcriptional regulator; PFAM: purine catabolism PurC domain protein; SPTR: C1YU67 Sugar diacid utilization regulator; PFAM: Purine catabolism regulatory protein-like family
YP_003681573.1	COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR015424:IPR005814:IPR015421; KEGG: tfu:Tfu_0686 aminotransferase; PFAM: aminotransferase class-III; SPTR: C1YU66 aminotransferase; PFAM: aminotransferase class-III
YP_003681574.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterProIPR016161:IPR010061:IPR015590:IPR016162:IPR 016160; KEGG: tfu:Tfu_0687 methylmalonate-semialdehyde dehydrogenase [acylating]; PFAM: aldehyde dehydrogenase; SPTR: C1YU65 methylmalonic acid semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase family; TIGRFAM: methylmalonic acid semialdehyde dehydrogenase
YP_003681575.1	KEGG: tcu:Tcur_3376 hypothetical protein; SPTR: C1YU64  uncharacterized protein
YP_003681576.1	COGs: COG0388 amidohydrolase; InterPro IPR001110:IPR003010; KEGG: rha:RHA1_ro06037 amidohydrolase, carbon-nitrogen hydrolase family protein; PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: C1YU63 Predicted amidohydrolase; PFAM: carbon-nitrogen hydrolase
YP_003681577.1	InterPro IPR009057:IPR001647:IPR012287; KEGG: rha:RHA1_ro02956 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YU62 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003681578.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: bcv:Bcav_0537 ABC transporter related; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YU61 ABC-type multidrug transporter ATPase component; PFAM: ABC transporter
YP_003681579.1	COGs: COG3559  exporter of polyketide antibiotics; KEGG: bcv:Bcav_0536 anibiotic ABC transporter efflux pump; SPTR: C1YU60  exporter of polyketide antibiotics
YP_003681580.1	KEGG: sen:SACE_5907 hypothetical protein; SPTR: C1YU59 Predicted membrane protein, COG1238
YP_003681581.1	COGs: COG0820 Fe-S-cluster redox enzyme; InterPro IPR007197:IPR004383:IPR006638; KEGG: tfu:Tfu_0683 hypothetical protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C1YU58 23S rRNA m(2)A-2503 methyltransferase; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: radical SAM superfamily; TIGRFAM:radical SAM protein
YP_003681582.1	KEGG: tfu:Tfu_0682 hypothetical protein; SPTR: C1YU57  uncharacterized protein; PFAM: Suppressor of fused protein (SUFU)
YP_003681583.1	InterPro IPR011701:IPR016196; KEGG: yen:YE2035  membrane transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YU56 Major Facilitator Superfamily transporter; PFAM: Major Facilitator Superfamily
YP_003681584.1	COGs: COG3682 transcriptional regulator protein; InterPro IPR005650:IPR011991; KEGG: tfu:Tfu_0567 regulator; PFAM: Penicillinase repressor; SPTR: C1YU55 Predicted transcriptional regulator, COG3682; PFAM: Penicillinase repressor
YP_003681585.1	COGs: COG0567 2-oxoglutarate dehydrogenase complex dehydrogenase (E1); InterPro IPR011603:IPR001078:IPR001017:IPR005475; KEGG: tfu:Tfu_0566 alpha-ketoglutarate decarboxylase; PFAM: transketolase central region; dehydrogenase E1 component; catalytic domain of components of various dehydrogenase complexes; SPTR: C1YU54 2-oxoglutarate dehydrogenase E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); dehydrogenase E1 component; transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component
YP_003681586.1	KEGG: sgr:SGR_2227 hypothetical protein; SPTR: C1YU53  uncharacterized protein
YP_003681587.1	KEGG: tfu:Tfu_0564 hypothetical protein; SPTR: C1YU52  uncharacterized protein
YP_003681588.1	COGs: COG1695 transcriptional regulator protein; InterPro IPR005149:IPR011991; KEGG: tfu:Tfu_0563 PadR family transcriptional regulator; PFAM: transcriptional regulator PadR family protein; SPTR: C1YU51 Predicted transcriptional regulator; PFAM: transcriptional regulator PadR-like family
YP_003681589.1	COGs: COG0281 Malic enzyme; InterPro IPR016040:IPR012301:IPR012302; KEGG: tfu:Tfu_0562 malate dehydrogenase (oxaloacetate decarboxylating); PFAM: malic protein NAD-binding; malic protein domain protein; PRIAM: malate dehydrogenase (oxaloacetate-decarboxylating); SPTR: C1YU50 Malic enzyme; PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain
YP_003681590.1	COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: kra:Krad_1224 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: C1YU49 amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_003681591.1	COGs: COG0765 ABC-type amino acid transporter permease; InterPro IPR010065:IPR000515; KEGG: kra:Krad_1223 binding-protein-dependent transporters inner membrane component; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YU48 amino acid ABC transporter membrane protein, PAAT family; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: Binding-protein-dependent transporter inner membrane component; TIGRFAM: amine acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family
YP_003681592.1	COGs: COG1126 ABC-type polar amino acid transporter ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: sco:SCO5258 ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YU47 amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter
YP_003681593.1	COGs: COG2226 methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: tfu:Tfu_0735 phosphatidylethanolamine N-methyltransferase / phosphatidyl-N-methylethanolamine N-methyltransferase; PFAM: methyltransferase type 11; SPTR: C1YU46 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain
YP_003681594.1	COGs: COG1247 Sortase and related acyltransferase; InterPro IPR000182:IPR016181; KEGG: tfu:Tfu_0561  acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YU45 Sortase-like acyltransferase; PFAM: acetyltransferase (GNAT) family
YP_003681595.1	KEGG: tfu:Tfu_0560  anti-sigma factor; SPTR: C1YU44  uncharacterized protein
YP_003681596.1	COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterProIPR013325:IPR013324:IPR014322:IPR014284:IPR 007627:IPR007624:IPR007630:IPR011991:IPR000943; KEGG: tfu:Tfu_0559 RNA polymerase sigma factor; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; SPTR: Q47SH0 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily
YP_003681597.1	KEGG: tfu:Tfu_0558  integral membrane protein; SPTR: C1YU42  uncharacterized protein
YP_003681598.1	COGs: COG1597 Sphingosine kinase; InterPro IPR001206; KEGG: tfu:Tfu_0557 diacylglycerol kinase, catalytic region; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase; SPTR: C1YU41 Sphingosine/diacylglycerol kinase-like enzyme; PFAM: diacylglycerol kinase catalytic domain
YP_003681599.1	InterPro IPR003482; KEGG: tfu:Tfu_0556 WhiB family cell cycle control transcriptional regulator; PFAM: transcription factor WhiB; SPTR: C1YU40 transcription factor WhiB; PFAM: transcription factor WhiB
YP_003681600.1	COGs: COG3920 Signal transduction histidine kinase; InterProIPR003594:IPR013656:IPR011495:IPR004358:IPR 005467; KEGG: tfu:Tfu_0555 signal transduction histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; hypothetical protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YU39 Signal transduction histidine kinase; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transduction histidine kinase; PAS fold
YP_003681601.1	COGs: COG2188 transcriptional regulators; InterPro IPR011663:IPR000524:IPR011991; KEGG: tfu:Tfu_0554 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SPTR: C1YU38 transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_003681602.1	COGs: COG2206 HD-GYP domain; InterPro IPR006674; KEGG: tfu:Tfu_0551  lipoprotein; PFAM: metal-dependent phosphohydrolase HD sub domain; SPTR: C1YU37 HD-GYP domain-containing protein; PFAM: HD domain
YP_003681603.1	COGs: COG2206 HD-GYP domain; InterPro IPR003607:IPR006675:IPR006674; KEGG: tfu:Tfu_0550 metal-dependent phosphohydrolase, HD region; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: C1YU36 Uncharacterized domain HDIG-containing protein; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG
YP_003681604.1	InterPro IPR014295; KEGG: tfu:Tfu_0549 anti-sigma factor; SPTR: C1YU35 anti-sigma factor, TIGR02949 family; TIGRFAM: anti-sigma factor; TIGRFAM: anti-sigma factor, TIGR02949 family
YP_003681605.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013325:IPR013324:IPR014293:IPR014284:IPR 007627:IPR013249:IPR000838; KEGG: tfu:Tfu_0548 RNA polymerase sigma factor RpoE; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: C1YU34 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, TIGR02947 family
YP_003681606.1	KEGG: tfu:Tfu_0547 hypothetical protein; SPTR: C1YU33  uncharacterized protein
YP_003681607.1	COGs: COG0422 thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: svi:Svir_34570 hydroxymethylpyrimidine synthase; PFAM: thiamine biosynthesis protein ThiC; SPTR: C1YU32 hydroxymethylpyrimidine synthase; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC
YP_003681608.1	COGs: COG2135 conserved hypothetical protein; InterPro IPR003738; KEGG: tfu:Tfu_0546 hypothetical protein; PFAM: protein of unknown function DUF159; SPTR: C1YU31 Uncharacterized conserved protein; PFAM: Uncharacterised ACR, COG2135
YP_003681609.1	KEGG: tfu:Tfu_2466 hypothetical protein; SPTR: C1YU30  uncharacterized protein; PFAM: protein of unknown function (DUF3068)
YP_003681610.1	InterPro IPR008979:IPR000421; KEGG: tfu:Tfu_2467 hypothetical protein; PFAM: coagulation factor 5/8 type domain protein; SPTR: C1YU29 PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: F5/8 type C domain; Domain of unknown function (DUF3367)
YP_003681611.1	COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: tfu:Tfu_2468  glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: C1YU28 glycosyltransferase; PFAM: glycosyl transferases group 1
YP_003681612.1	KEGG: tcu:Tcur_3995 hypothetical protein; SPTR: C1YU27  uncharacterized protein
YP_003681613.1	KEGG: tfu:Tfu_2469 hypothetical protein; SPTR: C1YU26  uncharacterized protein
YP_003681614.1	KEGG: hypothetical protein; SPTR: C1YU25  uncharacterized protein
YP_003681615.1	InterProIPR013830:IPR008957:IPR001087:IPR003961:IPR 013831; KEGG: tfu:Tfu_2470 fibronectin, type III; PFAM: lipolytic protein G-D-S-L family; Fibronectin type III domain protein; SPTR: C1YU23 GDSL-like lipase/acylhydrolase; PFAM: GDSL-like Lipase/acylhydrolase
YP_003681616.1	KEGG: tfu:Tfu_2471 hypothetical protein; SPTR: C1YU22  uncharacterized protein
YP_003681617.1	InterPro IPR005025; KEGG: tfu:Tfu_2472 flavoprotein; PFAM: NADPH-dependent FMN reductase; SPTR: C1YU21 Predicted flavoprotein; PFAM: NADPH-dependent FMN reductase
YP_003681618.1	COGs: COG1820 N-acetylglucosamine-6-phosphate deacetylase; InterPro IPR011059:IPR003764:IPR006680; KEGG: tfu:Tfu_2473 N-acetylglucosamine 6-phosphate deacetylase; PFAM: amidohydrolase; PRIAM: N-acetylglucosamine-6-phosphate deacetylase; SPTR: C1YU20 N-acetylglucosamine 6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase
YP_003681619.1	KEGG: tfu:Tfu_2474 hypothetical protein; SPTR: C1YU19  uncharacterized protein
YP_003681620.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395:IPR020471; KEGG: fal:FRAAL3972  aldo/keto oxidoreductase, NAD(P)-dependent, related to aryl-alcohol dehydrogenases; PFAM: aldo/keto reductase; SPTR: C1YU18 Predicted oxidoreductase similar to aryl-alcohol dehydrogenase; PFAM: Aldo/keto reductase family
YP_003681621.1	InterPro IPR013217; KEGG: sco:SCO0826 hypothetical protein; PFAM: methyltransferase type 12; SPTR: C1YU17 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain
YP_003681622.1	KEGG: bpr:GBP346_A0750 peptidase, M48 family; SPTR: C1YU16  uncharacterized protein
YP_003681623.1	COGs: COG1695 transcriptional regulator protein; InterPro IPR005149:IPR011991; KEGG: sro:Sros_4588 PadR family transcriptional regulator; PFAM: transcriptional regulator PadR family protein; SPTR: C1YU15 Predicted transcriptional regulator; tmRNA as predicted by Rfam (RF00023), score 158.82; PFAM: transcriptional regulator PadR-like family
YP_003681624.1	COGs: COG0768 cell division protein FtsI/penicillin-binding protein 2; InterPro IPR012338:IPR005311:IPR007887:IPR001460; KEGG: tfu:Tfu_2475 cell division protein FtsI/penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; NTF2 domain protein transpeptidase; SPTR: C1YU14 cell division protein FtsI/penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; NTF2-like N-terminal transpeptidase domain; Penicillin-binding protein dimerisation domain
YP_003681625.1	COGs: COG0691 tmRNA-binding protein; InterPro IPR000037:IPR020081; KEGG: tfu:Tfu_2476 SsrA-binding protein; PFAM: SmpB protein; SPTR: C1YU13 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein
YP_003681626.1	COGs: COG2177 cell division protein; InterPro IPR003838; KEGG: tfu:Tfu_2477 cell division protein FtsX; PFAM: protein of unknown function DUF214; SPTR: C1YU12 cell division protein; PFAM: Predicted permease
YP_003681627.1	COGs: COG2884 ATPase involved in cell division; InterPro IPR005286:IPR003439:IPR017871:IPR003593; KEGG: tfu:Tfu_2478 cell division ATP-binding protein FtsE; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YU11 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; type II (general) Secretory Pathway (IISP) Family protein
YP_003681628.1	COGs: COG1186 protein chain release factor B; InterPro IPR004374:IPR005139:IPR000352; KEGG: tfu:Tfu_2479 peptide chain release factor 2; PFAM: class I peptide chain release factor; PCRF domain protein; SPTR: C1YLC7 Bacterial peptide chain release factor 2 (BRF-2); TIGRFAM: peptide chain release factor 2; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2
YP_003681629.1	COGs: COG2902 NAD-specific glutamate dehydrogenase; InterPro IPR007780:IPR016040; KEGG: tfu:Tfu_2481 glutamate dehydrogenase (NAD); PFAM: NAD-glutamate dehydrogenase; SPTR: C1YLC6 glutamate dehydrogenase (NAD); PFAM: Bacterial NAD-glutamate dehydrogenase
YP_003681630.1	COGs: COG0546 phosphatase; InterPro IPR005834; KEGG: tfu:Tfu_2482 phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: C1YLC5 Predicted phosphatase
YP_003681631.1	KEGG: tfu:Tfu_2483 hypothetical protein; SPTR: C1YLC4  uncharacterized protein
YP_003681632.1	COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005833:IPR005834:IPR006402; KEGG: tfu:Tfu_2484 HAD family hydrolase; PFAM: haloacid dehalogenase; SPTR: C1YLC3 Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; Epoxide hydrolase N-terminal domain-like phosphatase
YP_003681633.1	COGs: COG1472 beta-glucosidase-related glycosidase; InterPro IPR002772:IPR001764:IPR017853; KEGG: tfu:Tfu_2486 glycosyl hydrolase; PFAM: glycoside hydrolase; SPTR: C1YLC2 beta-glucosidase-like glycosyl hydrolase; PFAM: glycosyl hydrolase family 3 C terminal domain; glycosyl hydrolase family 3 N terminal domain
YP_003681634.1	COGs: COG2190 phosphotransferase system IIA components; InterPro IPR011055:IPR001127; KEGG: sen:SACE_2062 PTS system, glucose-specific component; PFAM: sugar-specific permease EIIA 1 domain; SPTR: C1YLC1 PTS system N-acetylglucosamine-specific EIIA component; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; TIGRFAM: PTS system, glucose subfamily, IIA component
YP_003681635.1	COGs: COG1264 phosphotransferase system IIB components; InterPro IPR001996:IPR018113; KEGG: rop:ROP_12540 phosphotransferase system enzyme IIB component; PFAM: phosphotransferase system EIIB/cysteine, phosphorylation site; SPTR: C1YLC0 PTS system N-acetylglucosamine-specific EIIB component; PFAM: phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component
YP_003681636.1	COGs: COG0449 glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; InterPro IPR001347; KEGG: sro:Sros_1425 glutamine--fructose-6-phosphate transaminase (isomerizing); PFAM: sugar isomerase (SIS); PRIAM: glutamine--fructose-6-phosphate transaminase (isomerizing); SPTR: C1YLB9 glutamine--fructose-6-phosphate transaminase; PFAM: SIS domain
YP_003681637.1	COGs: COG2188 transcriptional regulators; InterPro IPR011663:IPR000524:IPR011991; KEGG: tcu:Tcur_4032 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SPTR: C1YLB8 transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_003681638.1	COGs: COG1263 phosphotransferase system IIC components glucose/maltose/N-acetylglucosamine-specific; InterPro IPR013013:IPR003352:IPR000326; KEGG: sro:Sros_1422 protein-N(pi)-phosphohistidine--sugarphosphotran sferase; PFAM: phosphotransferase system EIIC; phosphoesterase PA-phosphatase related; PRIAM: protein-N(pi)-phosphohistidine--sugar phosphotransferase; SPTR: C1YLB7 PTS system IIC component; PFAM: phosphotransferase system, EIIC
YP_003681639.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: svi:Svir_19030 Zn-dependent hydrolase, glyoxylase; SMART: beta-lactamase; SPTR: C1YLB6 Zn-dependent hydrolase, glyoxylase; PFAM: metallo-beta-lactamase superfamily
YP_003681640.1	COGs: COG1280  threonine efflux protein; InterPro IPR001123; KEGG: sco:SCO3362 hypothetical protein; PFAM: lysine exporter protein (LYSE/YGGA); SPTR: C1YLB5  threonine efflux protein; PFAM: LysE type translocator
YP_003681641.1	COGs: COG1522 transcriptional regulators; InterProIPR011991:IPR011008:IPR019885:IPR019887:IPR 019888:IPR000485; KEGG: sma:SAV_3764 transcription regulator AsnC; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type; SPTR: C1YLB4 AsnC family transcriptional regulator; PFAM: IclR helix-turn-helix domain; AsnC family
YP_003681642.1	COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); InterProIPR011116:IPR011130:IPR000185:IPR011115:IPR 004027:IPR014018; KEGG: tfu:Tfu_2490 preprotein translocase subunit SecA; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein; SPTR: C1YLB3 protein translocase subunit secA; TIGRFAM: preprotein translocase, Secsubunit alpha; PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, Secsubunit alpha
YP_003681643.1	KEGG: tcu:Tcur_4036 hypothetical protein; SPTR: C1YLB2  uncharacterized protein
YP_003681644.1	COGs: COG1544 ribosome-associated protein Y (PSrp-1); InterPro IPR003489; KEGG: tfu:Tfu_2492 30S ribosomal protein S30P / sigma 54 modulation protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; SPTR: C1YLB1 Sigma 54 modulation protein; 30S ribosomal protein S30P; TIGRFAM: ribosomal subunit interface protein; PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein
YP_003681645.1	COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: tfu:Tfu_2493 hypothetical protein; PFAM: phosphoribosyltransferase; SPTR: C1YLB0 Predicted amidophosphoribosyltransferase; PFAM: phosphoribosyl transferase domain
YP_003681646.1	InterPro IPR017517; KEGG: sen:SACE_2283 hypothetical protein; SPTR: C1YLA9 Uncharacterized conserved protein; PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: uncharacterized Actinobacterial protein TIGR03083
YP_003681647.1	InterPro IPR019606:IPR018910; KEGG: tfu:Tfu_2494 lipoprotein LpqB; PFAM: Lipoprotein LpqB, beta-propeller domain-like; Lipoprotein LpqB, GerMN domain; SPTR: C1YLA8 Lipoprotein LpqB family protein/sporulation and spore germination protein; PFAM: Lipoprotein LpqB beta-propeller domain; sporulation and spore germination
YP_003681648.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR009082:IPR003660:IPR003594:IPR003661:IPR 005467:IPR004358; KEGG: tfu:Tfu_2495 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: C1YLA7 Sensor protein; PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003681649.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001867:IPR001789:IPR011991:IPR011006; KEGG: tfu:Tfu_2496 response regulator receiver; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein; SPTR: C1YLA6 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal
YP_003681650.1	InterPro IPR018476; KEGG: xce:Xcel_2515 hypothetical protein; PFAM: glycerophosphoryl diester phosphodiesterase, membrane domain; SPTR: C1YLA5 glycerophosphoryl diester phosphodiesterase-like protein; PFAM: membrane domain of glycerophosphoryl diester phosphodiesterase
YP_003681651.1	KEGG: tfu:Tfu_2498  integral membrane protein; SPTR: C1YLA4  uncharacterized protein
YP_003681652.1	KEGG: tfu:Tfu_2499 hypothetical protein; SPTR: C1YLA3  uncharacterized protein
YP_003681653.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR011703:IPR016366; KEGG: tfu:Tfu_2500 ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: C1YLA2 MoxR-like ATPase; PFAM: ATPase family associated with various cellular activities (AAA)
YP_003681654.1	COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881:IPR002035; KEGG: tfu:Tfu_2501 hypothetical protein; PFAM: protein of unknown function DUF58; SMART: von Willebrand factor type A; SPTR: C1YLA1 Uncharacterized conserved protein; PFAM: protein of unknown function DUF58
YP_003681655.1	InterPro IPR011990; KEGG: sco:SCO2767 ATP/GTP-binding protein; SPTR: C1YLA0  uncharacterized protein; PFAM: IstB-like ATP binding protein
YP_003681656.1	COGs: COG1300 membrane protein; InterPro IPR002798; KEGG: tfu:Tfu_2502  integral membrane protein; PFAM: protein of unknown function DUF95 transmembrane; SPTR: C1YL99 Uncharacterized membrane protein; PFAM: integral membrane protein DUF95
YP_003681657.1	COGs: COG1714 membrane protein/domain; InterPro IPR010432; KEGG: tfu:Tfu_2503 hypothetical protein; PFAM: RDD domain containing protein; SPTR: C1YL98 Predicted membrane protein/domain; PFAM: RDD family
YP_003681658.1	COGs: COG0499 S-adenosylhomocysteine hydrolase; InterPro IPR020082:IPR000043:IPR016040:IPR015878; KEGG: tcu:Tcur_4055 adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding; S-adenosyl-L-homocysteine hydrolase; PRIAM: adenosylhomocysteinase; SPTR: C1YL97 adenosylhomocysteinase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase
YP_003681659.1	COGs: COG0499 S-adenosylhomocysteine hydrolase; InterPro IPR000043:IPR020082:IPR016040:IPR015878; KEGG: tfu:Tfu_2505 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding; PRIAM: adenosylhomocysteinase; SPTR: C1YL96 adenosylhomocysteinase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase
YP_003681660.1	InterPro IPR009061; KEGG: tcu:Tcur_4057 transcriptional regulator, MerR family; SPTR: C1YL95  uncharacterized protein
YP_003681661.1	KEGG: tfu:Tfu_2506 hypothetical protein; SPTR: C1YL94  uncharacterized protein
YP_003681662.1	COGs: COG0515 serine/threonine protein kinase; InterPro IPR008271:IPR011009:IPR017442:IPR000719; KEGG: tfu:Tfu_2507 tyrosine protein kinase:serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SPTR: C1YL93 serine/threonine protein kinase; PFAM: protein kinase domain
YP_003681663.1	COGs: COG2835 conserved hypothetical protein; InterPro IPR005651; KEGG: tfu:Tfu_2509 hypothetical protein; PFAM: protein of unknown function DUF343; SPTR: C1YL92 Uncharacterized conserved protein; PFAM: Trm112p-like protein
YP_003681664.1	COGs: COG1109 phosphomannomutase; InterProIPR016055:IPR005844:IPR005845:IPR005846:IPR 005843:IPR005841; KEGG: tfu:Tfu_2510 phosphomannomutase/phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; PRIAM: phosphomannomutase; SPTR: C1YL91 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase, C-terminal domain; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_003681665.1	KEGG: tfu:Tfu_2511 hypothetical protein; SPTR: C1YL90  uncharacterized protein; PFAM: protein of unknown function (DUF3499)
YP_003681666.1	KEGG: tfu:Tfu_2512 hypothetical protein; SPTR: C1YL89  uncharacterized protein; PFAM: Domain of unknown function (DUF1025)
YP_003681667.1	KEGG: tfu:Tfu_2513 hypothetical protein; SPTR: C1YL88  uncharacterized protein
YP_003681668.1	COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: tfu:Tfu_2514 hypothetical protein; PFAM: glycosyl transferase family 2; SPTR: C1YL87 Predicted glycosyltransferase; PFAM: glycosyl transferase family 2
YP_003681669.1	InterPro IPR003482; KEGG: tfu:Tfu_2515 WhiB family transcriptional regulator; PFAM: transcription factor WhiB; SPTR: C1YL86 transcription factor WhiB; PFAM: transcription factor WhiB
YP_003681670.1	KEGG: tfu:Tfu_2516 hypothetical protein; SPTR: Q47LX3  uncharacterized protein
YP_003681671.1	COGs: COG0391 conserved hypothetical protein; InterPro IPR010115:IPR002882; KEGG: tfu:Tfu_2517 LPPG:FO 2-phospho-L-lactate transferase; PFAM: protein of unknown function UPF0052 and CofD; SPTR: C1YL85 LPPG:FO 2-phospho-L-lactate transferase; TIGRFAM: LPPG domain protein containing protein; PFAM: Uncharacterised protein family UPF0052; TIGRFAM: LPPG:FO 2-phospho-L-lactate transferase
YP_003681672.1	COGs: COG1478 conserved hypothetical protein; InterPro IPR000415:IPR008225:IPR019943:IPR002847; KEGG: tfu:Tfu_2518 F420-0--gamma-glutamyl ligase; PFAM: protein of unknown function DUF129; nitroreductase; SPTR: C1YL84 Coenzyme F420-0 gamma-glutamyl ligase; TIGRFAM: F420 biosynthesis protein FbiB, C-terminal domain; F420-dependent oxidoreductase; PFAM: F420-0:gamma-glutamyl ligase; nitroreductase family; TIGRFAM: F420 biosynthesis protein FbiB, C-terminal domain; F420-0:gamma-glutamyl ligase
YP_003681673.1	COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter; InterPro IPR004705:IPR006153; KEGG: sen:SACE_4782 sodium/hydrogen antiporter; PFAM: sodium/hydrogen exchanger; SPTR: C1YL83 Na+ antiporter; TIGRFAM: Na+/H+ antiporter; PFAM: Sodium/hydrogen exchanger family; TIGRFAM: Na+/H+ antiporter, bacterial form
YP_003681674.1	COGs: COG3469 chitinase; InterProIPR003610:IPR001579:IPR001223:IPR013781:IPR 017853; KEGG: sco:SCO5003 chitinase A precursor; PFAM: glycoside hydrolase family 18; carbohydrate-binding family V/XII; SMART: carbohydrate-binding family V/XII; SPTR: C1YL82 chitinase; PFAM: glycosyl hydrolases family 18; carbohydrate binding domain
YP_003681675.1	COGs: COG1060 thiamine biosynthesis protein ThiH; InterProIPR020050:IPR007197:IPR019940:IPR019939:IPR 006638:IPR013785; KEGG: tfu:Tfu_2519 FO synthase; PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C1YL81 FO synthase subunit 2; FO synthase subunit 1; TIGRFAM: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit; PFAM: radical SAM superfamily; TIGRFAM: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit; radical SAM domain protein, CofH subfamily; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
YP_003681676.1	KEGG: scl:sce6490 hypothetical protein; SPTR: A9GNT7  uncharacterized protein
YP_003681677.1	KEGG: tfu:Tfu_2521 hypothetical protein; SPTR: C1YL80  uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104)
YP_003681678.1	COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: tfu:Tfu_2522 glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: C1YL79 glycosyltransferase; PFAM: glycosyl transferases group 1
YP_003681679.1	COGs: COG0463 glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: tcu:Tcur_4093 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: C1YL78 glycosyl transferase; PFAM: glycosyl transferase family 2
YP_003681680.1	KEGG: tcu:Tcur_4094 hypothetical protein; SPTR: C1YL77  uncharacterized protein
YP_003681681.1	InterPro IPR000873:IPR017523; KEGG: tfu:Tfu_2525 hypothetical protein; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YL76  uncharacterized protein; PFAM: AMP-binding enzyme; TIGRFAM: conserved hypothetical protein TIGR03089
YP_003681682.1	COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680:IPR011059; KEGG: ami:Amir_0524 amidohydrolase; PFAM: amidohydrolase; SPTR: C1YL75 Amidohydrolase, imidazolonepropionase; PFAM: Amidohydrolase family
YP_003681683.1	InterPro IPR001387; KEGG: tfu:Tfu_1656 helix-hairpin-helix DNA-binding motif-containing protein; SMART: helix-turn-helix domain protein; SPTR: C1YL74  uncharacterized protein
YP_003681684.1	COGs: COG0652 peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130:IPR015891; KEGG: tfu:Tfu_2820 peptidylprolyl isomerase; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; PRIAM: peptidylprolyl isomerase; SPTR: C1YL73 peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_003681685.1	COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterProIPR015424:IPR015422:IPR016454:IPR000192:IPR 015421; KEGG: tfu:Tfu_0595  pyridoxal-phosphate-dependent aminotransferase; PFAM: aminotransferase class V; SPTR: C1YL72 Cysteine desulfurase family protein; PFAM: aminotransferase class-V
YP_003681686.1	COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; InterPro IPR013792:IPR001986:IPR016228:IPR006264; KEGG: tfu:Tfu_0544 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); PRIAM: 3-phosphoshikimate 1-carboxyvinyltransferase; SPTR: C1YL71 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase
YP_003681687.1	COGs: COG1162 GTPase; InterPro IPR004881:IPR010914; KEGG: tfu:Tfu_0543 hypothetical protein; PFAM: GTPase EngC; SPTR: C1YL70 ribosome small subunit-dependent GTPase A; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A
YP_003681688.1	KEGG: acp:A2cp1_4440 hypothetical protein; SPTR: C1YL69  uncharacterized protein
YP_003681689.1	COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: sro:Sros_0290 transcriptional regulator protein-like protein; PFAM: helix-turn-helix HxlR type; SPTR: C1YL68 Predicted transcriptional regulator; PFAM: HxlR-like helix-turn-helix
YP_003681690.1	COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR016040:IPR006115; KEGG: sen:SACE_1381 dehydrogenase (secreted protein); PFAM: 6-phosphogluconate dehydrogenase NAD-binding; SPTR: C1YL67 beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_003681691.1	COGs: COG3860 conserved hypothetical protein; InterPro IPR018656; KEGG: nca:Noca_3346 hypothetical protein; PFAM: protein of unknown function DUF2087; SPTR: C1YL66 Uncharacterized conserved protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2087)
YP_003681692.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: tcu:Tcur_0561 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YL65 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003681693.1	COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR011809:IPR000760:IPR020583; KEGG: tfu:Tfu_0542 histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; SPTR: C1YL64 Histidinol-phosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase family; TIGRFAM: histidinol-phosphate phosphatase HisN, inositol monophosphatase family
YP_003681694.1	KEGG: fre:Franean1_1251  DNA-binding protein; SPTR: C1YL63  uncharacterized protein
YP_003681695.1	KEGG: sgr:SGR_4786  PucR-like transcriptional regulator; SPTR: C1YL62  uncharacterized protein
YP_003681696.1	COGs: COG0577 ABC-type antimicrobial peptide transport system permease; InterPro IPR003838; KEGG: kra:Krad_1083 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: C1YL61 ABC-type antimicrobial peptide transporter permease; PFAM: Predicted permease
YP_003681697.1	KEGG: kra:Krad_1085 hypothetical protein; SPTR: C1YL60  uncharacterized protein
YP_003681698.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: fre:Franean1_0502 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YL59 ABC-type antimicrobial peptide transporter ATPase component; PFAM: ABC transporter
YP_003681699.1	COGs: COG1615 conserved hypothetical protein; InterPro IPR005372; KEGG: tfu:Tfu_0541 hypothetical protein; PFAM: protein of unknown function UPF0182; SPTR: C1YL58 Uncharacterized conserved protein; PFAM: Uncharacterised protein family (UPF0182)
YP_003681700.1	KEGG: tfu:Tfu_0540 hypothetical protein; SPTR: C1YL57  uncharacterized protein
YP_003681701.1	COGs: COG3480 secreted protein containing a PDZ domain; InterPro IPR020568:IPR001478; KEGG: tfu:Tfu_0539 PDZ domain-containing protein; SPTR: C1YL56 Predicted secreted protein containing a PDZ domain; PFAM: Lon protease (S16) C-terminal proteolytic domain
YP_003681702.1	COGs: COG0314 Molybdopterin converting factor large subunit; InterPro IPR003448; KEGG: tfu:Tfu_0538 molybdopterin synthase subunit MoaE; PFAM: molybdopterin biosynthesis MoaE protein; SPTR: C1YL55 Molybdopterin synthase subunit MoaE; PFAM: MoaE protein
YP_003681703.1	COGs: COG0451 nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509:IPR002347; KEGG: tfu:Tfu_0537 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YL54 nucleoside-diphosphate-sugar epimerase; PFAM: NAD dependent epimerase/dehydratase family
YP_003681704.1	COGs: COG5282 conserved hypothetical protein; InterPro IPR018766; KEGG: tfu:Tfu_0536 hypothetical protein; PFAM: protein of unknown function DUF2342; SPTR: C1YL53 Uncharacterized conserved protein; TIGRFAM: conserved hypothetical protein; PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: conserved hypothetical protein
YP_003681705.1	InterPro IPR015797:IPR000086; KEGG: tfu:Tfu_0535 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: C1YL52 NTP pyrophosphohydrolase; PFAM: NUDIX domain
YP_003681706.1	COGs: COG1451 metal-dependent hydrolase; InterPro IPR002725; KEGG: sro:Sros_8351 metal-dependent hydrolase-like protein; PFAM: protein of unknown function DUF45; SPTR: C1YL51 Predicted metal-dependent hydrolase, COG1451; PFAM: protein of unknown function DUF45
YP_003681707.1	KEGG: GK21284 gene product from transcript GK21284-RA; SPTR: C1YL50  uncharacterized protein
YP_003681708.1	InterPro IPR000637:IPR017956:IPR003482; KEGG: tfu:Tfu_0532  DNA-binding protein; PFAM: transcription factor WhiB; SPTR: C1YL49 transcription factor WhiB; PFAM: transcription factor WhiB
YP_003681709.1	KEGG: hypothetical protein; SPTR: C1YL48  uncharacterized protein
YP_003681710.1	COGs: COG0210 Superfamily I DNA and RNA helicase; InterProIPR014017:IPR010997:IPR014016:IPR002121:IPR 000212; KEGG: tfu:Tfu_0530 superfamily I DNA/RNA helicase; PFAM: UvrD/REP helicase; HRDC domain protein; SMART: HRDC domain protein; SPTR: C1YL46 DNA/RNA helicase, superfamily I; PFAM: HRDC domain; UvrD/REP helicase
YP_003681711.1	COGs: COG0695 glutaredoxin and related protein; InterProIPR017937:IPR012336:IPR002109:IPR011915:IPR 012335; KEGG: tfu:Tfu_0529 glutaredoxin-like protein GlrX; PFAM: glutaredoxin; SPTR: C1YL45 glutaredoxin-like protein; TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; TIGRFAM: glutaredoxin-like protein
YP_003681712.1	InterPro IPR011006:IPR005561:IPR011991; KEGG: tfu:Tfu_0528 hypothetical protein; PFAM: ANTAR domain protein; SPTR: C1YL44 Response regulator with  antiterminator output domain; PFAM: ANTAR domain
YP_003681713.1	COGs: COG2816 NTP pyrophosphohydrolase containing a Zn-finger probably nucleic-acid-binding; InterProIPR015375:IPR020084:IPR015797:IPR000086:IPR 015376; KEGG: tfu:Tfu_0527 hypothetical protein; PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; SPTR: C1YL43 Zn-finger containing NTP pyrophosphohydrolase; PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain
YP_003681714.1	COGs: COG0624 acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR011650:IPR002933; KEGG: tfu:Tfu_0526  peptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; PRIAM: beta-Ala-His dipeptidase; SPTR: C1YL42 acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase; PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain
YP_003681715.1	InterProIPR018248:IPR011992:IPR018247:IPR018249:IPR 002048; KEGG: similar to centrin; PFAM: EF-Hand domain; SPTR: C1YL41  calcium-binding protein
YP_003681716.1	COGs: COG1840 ABC-type Fe3+ transporter periplasmic component; InterPro IPR006059; KEGG: sgr:SGR_4697  ABC transporter substrate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: C1YL40 ABC-type Fe3+ transporter periplasmic component; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: 2-aminoethylphosphonate ABC transporter periplasmic 2-aminoethylphosphonate binding protein; ABC transporter periplasmic binding protein, thiB subfamily
YP_003681717.1	COGs: COG1177 ABC-type spermidine/putrescine transport system permease II; InterPro IPR000515; KEGG: sgr:SGR_4696  ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YL39 ABC-type spermidine/putrescine transporter permease II; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003681718.1	COGs: COG0555 ABC-type sulfate transporter permease component; InterPro IPR017636:IPR000515; KEGG: sgr:SGR_4695  ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YL38 2-aminoethylphosphonate ABC transporter permease; TIGRFAM: 2-aminoethylphosphonate ABC transporter permease; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: 2-aminoethylphosphonate ABC transporter permease
YP_003681719.1	COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterProIPR008995:IPR003439:IPR013611:IPR017871:IPR 003593; KEGG: sgr:SGR_4694  ABC transporter ATP-binding protein; PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; SPTR: C1YL37 ABC-type spermidine/putrescine transporter ATPase component; PFAM: ABC transporter; TOBE domain; TIGRFAM: 2-aminoethylphosphonate ABC transporter ATP-binding component PhnT
YP_003681720.1	COGs: COG0546 phosphatase; InterPro IPR006439:IPR006402:IPR005834; KEGG: sgr:SGR_4693  hydrolase; PFAM: haloacid dehalogenase; SPTR: C1YL36 phosphonatase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; phosphonatase-like hydrolase
YP_003681721.1	COGs: COG0665 glycine/D-amino acid oxidase (deaminating); InterPro IPR017741:IPR006076; KEGG: sgr:SGR_4692  oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: C1YL35 FAD dependent oxidoreductase TIGR03364; TIGRFAM: FAD dependent oxidoreductase TIGR03364; PFAM: FAD dependent oxidoreductase; TIGRFAM: FAD dependent oxidoreductase TIGR03364
YP_003681722.1	KEGG: fre:Franean1_5150 hypothetical protein; SPTR: A8KZF2  uncharacterized protein
YP_003681723.1	COGs: COG2188 transcriptional regulators; InterPro IPR011663:IPR000524:IPR011991; KEGG: sgr:SGR_4691 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain protein; SPTR: C1YL34 GntR family transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_003681724.1	COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212:IPR014016:IPR014017; KEGG: tfu:Tfu_0524  DNA helicase; PFAM: UvrD/REP helicase; SPTR: Q47SK5  DNA helicase; PFAM: UvrD/REP helicase
YP_003681725.1	COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212:IPR014016:IPR014017; KEGG: tfu:Tfu_0523  ATP-dependent DNA helicase; PFAM: UvrD/REP helicase; SPTR: Q47SK6  ATP-dependent DNA helicase; PFAM: UvrD/REP helicase
YP_003681726.1	COGs: COG3695 methylated DNA-protein cysteine methyltransferase; InterPro IPR014048:IPR011991; KEGG: tfu:Tfu_0522 hypothetical protein; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; SPTR: Q47SK7  uncharacterized protein; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain
YP_003681727.1	KEGG: tfu:Tfu_0521 hypothetical protein; SPTR: C1YL26  uncharacterized protein; PFAM: SPW repeat
YP_003681728.1	COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterProIPR009036:IPR001763:IPR000594:IPR007901:IPR 016040; KEGG: tfu:Tfu_0520 molybdopterin biosynthesis-like protein MoeZ; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; Rhodanese domain protein; SMART: rhodanese; SPTR: C1YL25 Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis; PFAM: MoeZ/MoeB domain; Rhodanese-like domain; ThiF family
YP_003681729.1	KEGG: hypothetical protein; SPTR: C1YL24  uncharacterized protein
YP_003681730.1	COGs: COG1309 transcriptional regulator; InterPro IPR009057:IPR011075:IPR001647:IPR012287; KEGG: tfu:Tfu_0518 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YL23 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003681731.1	InterPro IPR008910; KEGG: tfu:Tfu_0517 hypothetical protein; PFAM: hypothetical protein; SPTR: C1YL22 Uncharacterized conserved protein; PFAM: Conserved TM helix
YP_003681732.1	KEGG: tfu:Tfu_0516 hypothetical protein; SPTR: Q47SL3  uncharacterized protein
YP_003681733.1	KEGG: cai:Caci_5531 hypothetical protein; SPTR: C1YL20  uncharacterized protein
YP_003681734.1	KEGG: tfu:Tfu_0515 hypothetical protein; SPTR: C1YL19  uncharacterized protein
YP_003681735.1	COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR011545:IPR001650:IPR000629:IPR008162:IPR 014021:IPR014001; KEGG: tfu:Tfu_0514 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase ; helicase; SPTR: C1YL18 DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_003681736.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073:IPR000639; KEGG: tfu:Tfu_0513  hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YL17 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003681737.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: tfu:Tfu_0512 Zn-dependent hydrolase; SPTR: C1YL16 Zn-dependent hydrolase, glyoxylase; PFAM: metallo-beta-lactamase superfamily
YP_003681738.1	COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR016195:IPR004013:IPR003141; KEGG: tfu:Tfu_0511 phosphoesterase PHP, N-terminal; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: C1YL15 Predicted metal-dependent phosphoesterase, PHP family; PFAM: PHP domain
YP_003681739.1	KEGG: tfu:Tfu_0510 hypothetical protein; SPTR: C1YL14  uncharacterized protein
YP_003681740.1	COGs: COG1217 membrane GTPase involved in stress response; InterProIPR000640:IPR005225:IPR006298:IPR009000:IPR 000795:IPR004161:IPR009022; KEGG: tfu:Tfu_2456 GTP-binding protein TypA; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; SMART: elongation factor G domain protein; SPTR: C1YL13 GTP-binding protein TypA/BipA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain
YP_003681741.1	COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR015797:IPR000086:IPR020476; KEGG: tfu:Tfu_2457  MutT-like protein; PFAM: NUDIX hydrolase; SPTR: C1YL12 ADP-ribose pyrophosphatase; PFAM: NUDIX domain; TIGRFAM: mutator mutT protein
YP_003681742.1	COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) subunit alpha - helicase superfamily I member; InterPro IPR010994:IPR006345:IPR003583; KEGG: tfu:Tfu_1753 helicase RecD/TraA; PRIAM: exodeoxyribonuclease V; SPTR: C1YL11 Helicase, , RecD/TraA family; TIGRFAM: helicase, RecD/TraA family; PFAM:  ATPase (DUF699); Viral (Superfamily 1) RNA helicase; TIGRFAM: helicase, , RecD/TraA family
YP_003681743.1	COGs: COG2315 conserved hypothetical protein; InterPro IPR007351; KEGG: hch:HCH_06934 hypothetical protein; PFAM: protein of unknown function DUF419; SPTR: C1YL10 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF419)
YP_003681744.1	KEGG: tcu:Tcur_3349 hypothetical protein; SPTR: C1YL09  uncharacterized protein
YP_003681745.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR008271:IPR011009:IPR017442:IPR000719:IPR 017441; KEGG: tfu:Tfu_2375 tyrosine protein kinase:serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SPTR: C1YL08 serine/threonine protein kinase; PFAM: protein kinase domain
YP_003681746.1	KEGG: mlu:Mlut_17990 hypothetical protein; SPTR: C1YL07  uncharacterized protein
YP_003681747.1	COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterProIPR019948:IPR008334:IPR006179:IPR006146:IPR 019931; KEGG: tcu:Tcur_1235 5'-nucleotidase domain protein; PFAM: 5'-nucleotidase domain protein; Gram-positive anchor; SPTR: C1YL06 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase; TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: 5'-nucleotidase, C-terminal domain; TIGRFAM: LPXTG-motif cell wall anchor domain
YP_003681748.1	KEGG: similar to AGAP007611-PA; SPTR: C1YL05  uncharacterized protein
YP_003681749.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789:IPR001867:IPR011991; KEGG: tfu:Tfu_2549 response regulator receiver; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C1YL04 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal
YP_003681750.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR009082:IPR003660:IPR003594:IPR003661:IPR 005467:IPR004358; KEGG: tfu:Tfu_2550 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: C1YL03 Sensor protein; PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003681751.1	InterPro IPR001296; KEGG: tfu:Tfu_2527 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: C1YL02 glycosyltransferase
YP_003681752.1	KEGG: tfu:Tfu_2528 hypothetical protein; SPTR: C1YL01  uncharacterized protein
YP_003681753.1	COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: sro:Sros_0374 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: C1YL00 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase
YP_003681754.1	COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: sro:Sros_0375 glycosyltransferase-like protein; PFAM: glycosyl transferase group 1; SPTR: C1YKZ9 glycosyltransferase; PFAM: glycosyl transferases group 1
YP_003681755.1	COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterProIPR016040:IPR008927:IPR014027:IPR017476:IPR 001732:IPR014026; KEGG: tfu:Tfu_2529  UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: C1YKZ8 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_003681756.1	COGs: COG0438 glycosyltransferase; InterPro IPR001296; KEGG: sro:Sros_1361 glycosyltransferase-like protein; PFAM: glycosyl transferase group 1; SPTR: C1YKZ7 glycosyltransferase; PFAM: glycosyl transferases group 1
YP_003681757.1	COGs: COG0778 nitroreductase; InterPro IPR000415; KEGG: sco:SCO5049 hypothetical protein; PFAM: nitroreductase; SPTR: C1YKZ6 nitroreductase; PFAM: nitroreductase family
YP_003681758.1	COGs: COG2208 serine phosphatase RsbU regulator of sigma subunit; InterPro IPR010822:IPR001932:IPR003018; KEGG: sco:SCO7320 hypothetical protein; PFAM: stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; SPTR: C1YKZ5 serine phosphatase RsbU, regulator of sigma subunit; PFAM: stage II sporulation protein E (SpoIIE)
YP_003681759.1	InterPro IPR010822:IPR003594:IPR001932; KEGG: sco:SCO7321 hypothetical protein; PFAM: stage II sporulation E family protein; ATP-binding region ATPase domain protein; SMART: protein phosphatase 2C domain protein; ATP-binding region ATPase domain protein; SPTR: C1YKZ4 anti-sigma regulatory factor (Ser/Thr protein kinase); PFAM: stage II sporulation protein E (SpoIIE)
YP_003681760.1	COGs: COG2172 anti-sigma regulatory factor (Ser/Thr protein kinase); InterPro IPR003594; KEGG: sco:SCO7322 anti-sigma factor; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YKZ3 anti-sigma regulatory factor (Ser/Thr protein kinase); PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003681761.1	COGs: COG1366 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645; KEGG: sma:SAV_1095 anti-sigma factor antagonist; PFAM: sulfate transporter/antisigma-factor antagonist STAS; SPTR: C1YKZ2 anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor); PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_003681762.1	COGs: COG1366 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645; KEGG: sco:SCO7324 regulatory protein; PFAM: sulfate transporter/antisigma-factor antagonist STAS; SPTR: C1YKZ1 anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor); PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_003681763.1	COGs: COG2208 serine phosphatase RsbU regulator of sigma subunit; InterPro IPR010822:IPR001932; KEGG: sma:SAV_1093 magnesium or manganese-dependent protein phosphatase; PFAM: stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; SPTR: C1YKZ0 serine phosphatase RsbU, regulator of sigma subunit; PFAM: stage II sporulation protein E (SpoIIE)
YP_003681764.1	COGs: COG1846 transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: sma:SAV_1092 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YKY9 transcriptional regulator; PFAM: MarR family
YP_003681765.1	KEGG: ami:Amir_6353 hypothetical protein; SPTR: C1YKY8  uncharacterized protein
YP_003681766.1	KEGG: fal:FRAAL2226 hypothetical protein; SPTR: C1YKY7  uncharacterized protein
YP_003681767.1	COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: tfu:Tfu_2531  glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: C1YKY6 Predicted glycosyltransferase; PFAM: glycosyl transferase family 2
YP_003681768.1	InterPro IPR000462; KEGG: tfu:Tfu_2532  transferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: C1YKY5 phosphatidylglycerophosphate synthase; PFAM: CDP-alcohol phosphatidyltransferase
YP_003681769.1	COGs: COG0371 glycerol dehydrogenase; InterPro IPR002658:IPR016205; KEGG: tfu:Tfu_2533  glycerol 1-phosphate dehydrogenase; PFAM: 3-dehydroquinate synthase; SPTR: C1YKY4 glycerol dehydrogenase-like oxidoreductase; PFAM: 3-dehydroquinate synthase
YP_003681770.1	COGs: COG1213 sugar nucleotidyltransferase; InterPro IPR005835; KEGG: tfu:Tfu_2534  nucleotide sugar-1-phosphate transferase; PFAM: nucleotidyl transferase; SPTR: C1YKY3 Predicted sugar nucleotidyltransferase; PFAM: nucleotidyl transferase
YP_003681771.1	KEGG: tfu:Tfu_2535 hypothetical protein; SPTR: C1YKY2  uncharacterized protein
YP_003681772.1	KEGG: tfu:Tfu_2536 hypothetical protein; SPTR: C1YKY1  uncharacterized protein
YP_003681773.1	COGs: COG1134 ABC-type polysaccharide/polyol phosphate transporter ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: tfu:Tfu_2537 ABC-type polysaccharide/polyol phosphate transporter ATPase component; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YKY0 ABC-type polysaccharide/polyol phosphate transporter ATPase component; PFAM: ABC transporter
YP_003681774.1	COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease; InterPro IPR013525:IPR000412; KEGG: tfu:Tfu_2538 lipopolysaccharide exporter; PFAM: ABC transporter; SPTR: C1YKX9 ABC-type polysaccharide/polyol phosphate export system, permease component; PFAM: ABC transporter
YP_003681775.1	COGs: COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; InterPro IPR001228; KEGG: tfu:Tfu_2539 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; SPTR: C1YKX8 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_003681776.1	COGs: COG0584 glycerophosphoryl diester phosphodiesterase; InterPro IPR017946:IPR004129; KEGG: tfu:Tfu_2540 glycerophosphoryl diester phosphodiesterase, PFAM: glycerophosphoryl diester phosphodiesterase; SPTR: C1YKX7 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase family
YP_003681777.1	KEGG: sgr:SGR_4746 hypothetical protein; SPTR: C1YKX6  uncharacterized protein
YP_003681778.1	COGs: COG1215 glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: tfu:Tfu_2541  glycosyl transferase; PFAM: glycosyl transferase family 2; SPTR: C1YKX5 glycosyl transferase; PFAM: glycosyl transferase family 2
YP_003681779.1	InterPro IPR007829; KEGG: lic:LIC12836 hypothetical protein; PFAM: hypotheticalprotein; SPTR: C1YKX4 TM2 domain-containing protein; PFAM: TM2 domain
YP_003681780.1	COGs: COG1316 transcriptional regulator; InterPro IPR004474; KEGG: tfu:Tfu_2542 cell envelope-related transcriptional attenuator; PFAM: cell envelope-related transcriptional attenuator; SPTR: C1YKX3 cell envelope-related function transcriptional attenuator common domain; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain
YP_003681781.1	KEGG: tfu:Tfu_2543 hypothetical protein; SPTR: C1YKX2  uncharacterized protein
YP_003681782.1	COGs: COG1004 UDP-glucose 6-dehydrogenase; InterProIPR016040:IPR014027:IPR008927:IPR017476:IPR 001732:IPR014026; KEGG: tfu:Tfu_2544 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: C1YKX1 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_003681783.1	KEGG: hypothetical protein; SPTR: C1YKX0  uncharacterized protein
YP_003681784.1	COGs: COG2271 Sugar phosphate permease; InterPro IPR011701:IPR001958:IPR016196; KEGG: sro:Sros_5781 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: C1YKW9 Sugar phosphate permease; PFAM: Major Facilitator Superfamily
YP_003681785.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: cai:Caci_0023 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YKW8 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003681786.1	COGs: COG0041 phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: tfu:Tfu_2546 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PRIAM: phosphoribosylaminoimidazole carboxylase; SPTR: C1YKW7 phosphoribosylaminoimidazole carboxylase, PurE protein; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein
YP_003681787.1	COGs: COG0026 phosphoribosylaminoimidazole carboxylase (NCAIR synthetase); InterProIPR016185:IPR011054:IPR005875:IPR003135:IPR 013817:IPR013816:IPR011761; KEGG: tfu:Tfu_2547 phosphoribosylaminoimidazole carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; SPTR: C1YKW6 phosphoribosylaminoimidazole carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase; PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein
YP_003681788.1	COGs: COG2246 membrane protein; InterPro IPR007267; KEGG: tfu:Tfu_2548 hypothetical protein; PFAM: GtrA family protein; SPTR: C1YKW5 Predicted membrane protein, COG2246; PFAM: GtrA-like protein
YP_003681789.1	InterPro IPR003675; KEGG: tfu:Tfu_0509 hypothetical protein; PFAM: hypothetical protein; SPTR: C1YKW4 CAAX amino terminal protease family; PFAM: CAAX amino terminal protease family
YP_003681790.1	COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR002744:IPR019591:IPR000808; KEGG: tfu:Tfu_0508 ATP-binding protein involved in chromosome partitioning; PFAM: ATPase-like, ParA/MinD; protein of unknown function DUF59; SPTR: C1YKW3 ATPase involved in chromosome partitioning; PFAM: ParA/MinD ATPase like; Domain of unknown function DUF59; ATPase MipZ
YP_003681791.1	COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR001254:IPR009003:IPR001940; KEGG: tfu:Tfu_0507 trypsin-like serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: C1YKW2 Trypsin-like serine protease with C-terminal PDZ domain; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF)
YP_003681792.1	KEGG: tfu:Tfu_0506 hypothetical protein; SPTR: C1YKW1  uncharacterized protein
YP_003681793.1	KEGG: tfu:Tfu_0505 hypothetical protein; SPTR: C1YKW0  uncharacterized protein
YP_003681794.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013325:IPR013324:IPR014284:IPR007627:IPR 013249; KEGG: tfu:Tfu_0504 RNA polymerase sigma factor SigE; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: C1YKV9 RNA polymerase, sigma 29 subunit, SigE; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003681795.1	COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: tcu:Tcur_1182 O-methyltransferase family 3; PFAM: O-methyltransferase family 3; SPTR: C1YKV8 Predicted O-methyltransferase, COG4122; PFAM: O-methyltransferase
YP_003681796.1	InterPro IPR016181:IPR000182; KEGG: ach:Achl_2704 GCN5-related N-acetyltransferase; SPTR: C1YKV7  uncharacterized protein
YP_003681797.1	COGs: COG0260 leucyl aminopeptidase; InterPro IPR008283:IPR000819; KEGG: tfu:Tfu_0503 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein; PRIAM: leucyl aminopeptidase; SPTR: C1YKV6 leucyl aminopeptidase; PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain
YP_003681798.1	KEGG: bcv:Bcav_2925 hypothetical protein; SPTR: C1YKV5  uncharacterized protein; PFAM: protein of unknown function (DUF3117)
YP_003681799.1	KEGG: tfu:Tfu_0499 hypothetical protein; SPTR: C1YKV4  uncharacterized protein
YP_003681800.1	KEGG: tfu:Tfu_0497 hypothetical protein; SPTR: C1YKV3  uncharacterized protein
YP_003681801.1	COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: tfu:Tfu_0496 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C1YKV2  uncharacterized protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2
YP_003681802.1	COGs: COG0624 acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR010174:IPR011650:IPR002933; KEGG: tfu:Tfu_0495 succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: C1YKV1 Succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase
YP_003681803.1	COGs: COG2171 Tetrahydrodipicolinate N-succinyltransferase; InterPro IPR001451:IPR011004:IPR018357; KEGG: tfu:Tfu_0494 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; PRIAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; SPTR: C1YKV0 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
YP_003681804.1	KEGG: tfu:Tfu_0493 hypothetical protein; SPTR: C1YKU9  uncharacterized protein
YP_003681805.1	COGs: COG0436 aspartate/tyrosine/aromatic aminotransferase; InterProIPR015424:IPR004839:IPR019880:IPR004838:IPR 015421; KEGG: tfu:Tfu_0492 N-succinyldiaminopimelate aminotransferase; PFAM: aminotransferase class I and II; SPTR: C1YKU8 aminotransferase; TIGRFAM: succinyldiaminopimelate transaminase; PFAM: aminotransferase class I and II; TIGRFAM: succinyldiaminopimelate transaminase
YP_003681806.1	InterPro IPR001450:IPR000813:IPR017900:IPR017896; KEGG: sro:Sros_8435 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C4ED77 Ferredoxin; PFAM: 4Fe-4S binding domain
YP_003681807.1	KEGG: tfu:Tfu_0490 hypothetical protein; SPTR: Q47SN9  uncharacterized protein
YP_003681808.1	KEGG: tfu:Tfu_0489 hypothetical protein; SPTR: C1YKU6  uncharacterized protein
YP_003681809.1	InterPro IPR008915; KEGG: tfu:Tfu_0488  peptidase; PFAM: peptidase M50; SPTR: C1YKU5 Zn-dependent protease; PFAM: peptidase family M50
YP_003681810.1	KEGG: tfu:Tfu_0487 hypothetical protein; SPTR: C1YKU4  uncharacterized protein
YP_003681811.1	COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737:IPR017810; KEGG: tfu:Tfu_0486 hypothetical protein; PFAM: LmbE family protein; SPTR: C1YKU3 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase; TIGRFAM:1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D -glucopyranosidedeacetylase; PFAM: GlcNAc-PI de-N-acetylase; TIGRFAM: 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase
YP_003681812.1	COGs: COG1506 dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469:IPR001375; KEGG: tfu:Tfu_0485  peptidase; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; SPTR: C1YKU2 dipeptidyl aminopeptidase/acylaminoacyl peptidase; PFAM: prolyl oligopeptidase family; dipeptidyl peptidase IV (DPP IV) N-terminal region
YP_003681813.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR011009:IPR017442:IPR017441:IPR008271:IPR 000719:IPR020635:IPR002290; KEGG: tfu:Tfu_2375 tyrosine protein kinase:serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: C1YKU1 protein kinase family protein; PFAM: protein kinase domain
YP_003681814.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR011009:IPR017442:IPR017441:IPR008271:IPR 000719:IPR020635:IPR002290; KEGG: tfu:Tfu_2375 tyrosine protein kinase:serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: C1YKU0 protein kinase family protein; PFAM: protein kinase domain
YP_003681815.1	KEGG: mgi:Mflv_0459  transmembrane protein; SPTR: C1YKT9  uncharacterized protein; PFAM: protein of unknown function (DUF3054)
YP_003681816.1	KEGG: npu:Npun_R4604 hypothetical protein; SPTR: C1YKT8  uncharacterized protein
YP_003681817.1	COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: tfu:Tfu_2449 tRNA/rRNA methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: C1YKT7 rRNA methylase; PFAM: SpoU rRNA methylase family
YP_003681818.1	InterPro IPR016181:IPR000182; KEGG: mmi:MMAR_0332 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YKT6 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003681819.1	InterPro IPR016181; KEGG: mav:MAV_5171 GNAT family acetyltransferase; SPTR: C1YKT5  uncharacterized protein
YP_003681820.1	KEGG: sen:SACE_3355 hypothetical protein; SPTR: C1YKT4  uncharacterized protein
YP_003681821.1	InterPro IPR010985; KEGG: nml:Namu_1862 CopG family transcripitonal regulator; SPTR: C1YKT3  uncharacterized protein; PFAM: Arc-like DNA binding domain
YP_003681822.1	COGs: COG3654 Prophage maintenance system killer protein; InterPro IPR006440:IPR003812; KEGG: sro:Sros_6570 death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; SPTR: C1YKT2 Death-on-curing family protein; TIGRFAM: death-on-curing family protein; PFAM: Fic/DOC family; TIGRFAM: death-on-curing family protein
YP_003681823.1	KEGG: nml:Namu_1862 CopG family transcripitonal regulator; SPTR: C1YKT1  uncharacterized protein
YP_003681824.1	COGs: COG0479 succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterProIPR001041:IPR009051:IPR004489:IPR001450:IPR 012675:IPR012285:IPR006058:IPR017900:IPR017896; KEGG: tfu:Tfu_2451 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; ferredoxin; SPTR: C1YKT0 succinate dehydrogenase subunit B; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_003681825.1	COGs: COG1053 succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR015939:IPR011280:IPR003953:IPR004112; KEGG: tfu:Tfu_2452 succinate dehydrogenase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PRIAM: succinate dehydrogenase; SPTR: C1YKS9 succinate dehydrogenase subunit A; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup
YP_003681826.1	InterPro IPR011138; KEGG: tfu:Tfu_2453 succinate dehydrogenase subunit C; SPTR: C1YKS8 succinate dehydrogenase subunit C; TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; PFAM: succinate dehydrogenase/fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family
YP_003681827.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: tfu:Tfu_2454 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: C1YKS7 transcriptional regulator, COG0583; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_003681828.1	KEGG: nfa:nfa56010 hypothetical protein; SPTR: C1YKS6  uncharacterized protein
YP_003681829.1	COGs: COG1053 succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR015939:IPR004112:IPR003953; KEGG: tcu:Tcur_1116 fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: C1YKS5 succinate dehydrogenase subunit A; PFAM: domain; FAD binding domain
YP_003681830.1	COGs: COG0479 succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterProIPR001041:IPR006058:IPR012675:IPR012285:IPR 009051:IPR004489; KEGG: nfa:nfa56030 fumarate reductase iron-sulfur subunit; PFAM: ferredoxin; SPTR: C1YKS4 succinate dehydrogenase subunit B; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_003681831.1	KEGG: mno:Mnod_4618 translation initiation factor IF-2; SPTR: C1YIC8  uncharacterized protein
YP_003681832.1	InterPro IPR007278; KEGG: tfu:Tfu_1802 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YKS2  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003681833.1	InterPro IPR007278; KEGG: tcu:Tcur_2689 protein of unknown function DUF397; PFAM: protein of unknown function DUF397; SPTR: C1YKS1  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003681834.1	InterPro IPR010982:IPR001387; KEGG: sro:Sros_3358 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YKS0  uncharacterized protein; PFAM: Helix-turn-helix
YP_003681835.1	KEGG: cai:Caci_1856 4'-phosphopantetheinyl transferase; SPTR: C1YKR9  uncharacterized protein
YP_003681836.1	SPTR: C1YKR8  uncharacterized protein
YP_003681837.1	KEGG: sro:Sros_3656 hypothetical protein; SPTR: C1YKR6  uncharacterized protein
YP_003681838.1	KEGG: reh:H16_B0930 hypothetical protein; SPTR: C1YKR5  uncharacterized protein
YP_003681839.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: sgr:SGR_5825  hydrolase; SPTR: C1YKR4 Zn-dependent hydrolase, glyoxylase; PFAM: metallo-beta-lactamase superfamily
YP_003681840.1	COGs: COG2114 adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054; KEGG: tfu:Tfu_2552 adenylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; PRIAM: adenylate cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: C1YKR3 Family 3 adenylate cyclase; PFAM: adenylate and Guanylate cyclase catalytic domain
YP_003681841.1	COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR003142:IPR004143:IPR004408; KEGG: tfu:Tfu_2553 biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein; SPTR: C1YKR2 BirA, biotin-(acetyl-CoA-carboxylase) ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region
YP_003681842.1	InterPro IPR008538; KEGG: sen:SACE_0512 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: C1YKR1 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF820)
YP_003681843.1	COGs: COG2352 phosphoenolpyruvate carboxylase; InterPro IPR015813:IPR001449:IPR018129; KEGG: tfu:Tfu_2554 phosphoenolpyruvate carboxylase; PFAM: phosphoenolpyruvate carboxylase; PRIAM: phosphoenolpyruvate carboxylase; SPTR: C1YKR0 phosphoenolpyruvate carboxylase; PFAM: phosphoenolpyruvate carboxylase
YP_003681844.1	COGs: COG4799 acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022:IPR000438:IPR011762:IPR011763; KEGG: tfu:Tfu_2555 propionyl-CoA carboxylase complex subunit beta; PFAM: carboxyl transferase; SPTR: C1YKQ9 acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta); PFAM: carboxyl transferase domain
YP_003681845.1	KEGG: tfu:Tfu_2556 hypothetical protein; SPTR: C1YKQ8  uncharacterized protein
YP_003681846.1	COGs: COG4770 acetyl/propionyl-CoA carboxylase alpha subunit; InterProIPR016185:IPR011054:IPR011053:IPR005481:IPR 005479:IPR005482:IPR000089:IPR013817:IPR013816:IPR001882:I PR011761:IPR011764; KEGG: tfu:Tfu_2557  acyl-CoA carboxylase, alpha subunit; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; SPTR: C1YKQ7 acetyl/propionyl-CoA carboxylase, subunit alpha; PFAM: carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme
YP_003681847.1	KEGG: tcu:Tcur_3383 protein of unknown function DUF820; SPTR: C1YKQ6  uncharacterized protein
YP_003681848.1	COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: bfa:Bfae_28490 Na+/H+ dicarboxylate symporter; PFAM: sodium:dicarboxylate symporter; SPTR: C1YKQ5 Na+/H+ dicarboxylate symporter; PFAM: Sodium:dicarboxylate symporter family
YP_003681849.1	KEGG: tfu:Tfu_2558 hypothetical protein; SPTR: C1YKQ4  uncharacterized protein
YP_003681850.1	InterPro IPR002711; KEGG: fal:FRAAL4530 hypothetical protein; PFAM: HNH endonuclease; SPTR: C1YKQ3 HNH endonuclease; PFAM: HNH endonuclease; Domain of unknown function DUF222
YP_003681851.1	KEGG: svi:Svir_02470 predicted nucleoside kinase, CMP and AMP kinase; SPTR: C1YKQ2 Predicted nucleoside kinase, CMP and AMP kinase
YP_003681852.1	KEGG: svi:Svir_02460 hypothetical protein; SPTR: C1YKQ1  uncharacterized protein
YP_003681853.1	COGs: COG1249 pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR016156:IPR013027:IPR004099:IPR000815; KEGG: tfu:Tfu_2559 flavoprotein disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: C1YKQ0 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_003681854.1	InterPro IPR009288; KEGG: tcu:Tcur_4181 AIG2 family protein; PFAM: AIG2 family protein; SPTR: C1YKP9 AIG2-like family protein
YP_003681855.1	COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR011268:IPR000845; KEGG: sco:SCO4917 purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; SPTR: C1YKP8 inosine guanosine and xanthosine phosphorylase family protein; TIGRFAM: inosine guanosine and xanthosine phosphorylase family; PFAM: phosphorylase superfamily; TIGRFAM: inosine guanosine and xanthosine phosphorylase family
YP_003681856.1	KEGG: tfu:Tfu_2562 hypothetical protein; SPTR: C1YKP7  uncharacterized protein; PFAM: protein of unknown function (DUF2581)
YP_003681857.1	COGs: COG1816 adenosine deaminase; InterPro IPR006330:IPR001365; KEGG: sro:Sros_1279 adenosine deaminase; PFAM: adenosine/AMP deaminase; PRIAM: adenosine deaminase; SPTR: C1YKP6 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; TIGRFAM: adenosine deaminase
YP_003681858.1	COGs: COG1473 metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR017439:IPR010168:IPR011650:IPR002933; KEGG: tfu:Tfu_2564 peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; PRIAM: aminoacylase; SPTR: C1YKP5 Amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase family M20/M25/M40; peptidase dimerisation domain; TIGRFAM: amidohydrolase
YP_003681859.1	COGs: COG2170 conserved hypothetical protein; InterPro IPR006336:IPR011793; KEGG: tfu:Tfu_2565 carboxylate-amine ligase; PFAM: glutamate--cysteine ligase; SPTR: Q47LS4 carboxylate-amine ligase Tfu_2565; PFAM: glutamate-cysteine ligase family 2(GCS2); TIGRFAM: uncharacterized enzyme
YP_003681860.1	COGs: COG1295 membrane protein; InterPro IPR004664; KEGG: tcu:Tcur_4202 ribonuclease BN; PFAM: ribonuclease BN; SPTR: C1YKP2 Predicted membrane protein, COG1295; PFAM: ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); ribonuclease
YP_003681861.1	COGs: COG0153 Galactokinase; InterPro IPR014721:IPR020568:IPR013750:IPR006206; KEGG: tcu:Tcur_4206 galactokinase; PFAM: GHMP kinase domain protein; SPTR: C1YKP1 Galactokinase; PFAM: Galactokinase galactose-binding signature
YP_003681862.1	COGs: COG1316 transcriptional regulator; InterPro IPR004474; KEGG: tfu:Tfu_2567 cell envelope-related transcriptional attenuator; PFAM: cell envelope-related transcriptional attenuator; SPTR: C1YKP0 cell envelope-related function transcriptional attenuator common domain; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain
YP_003681863.1	COGs: COG0538 isocitrate dehydrogenase; InterPro IPR004790:IPR019818:IPR001804; KEGG: tfu:Tfu_2568 isocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: isocitrate dehydrogenase (NADP(+)); SPTR: C1YKN9 isocitrate dehydrogenase (NADP); TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, eukaryotic type
YP_003681864.1	KEGG: tfu:Tfu_2569  integral membrane protein; SPTR: C1YKN8  uncharacterized protein; PFAM: protein of unknown function (DUF3017)
YP_003681865.1	COGs: COG1716 FOG: FHA domain; InterPro IPR000253:IPR008984; KEGG: tfu:Tfu_2570 forkhead-associated; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: C1YKN7 FHA domain-containing protein; PFAM: FHA domain
YP_003681866.1	COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; InterPro IPR016040:IPR000672:IPR020631:IPR020630; KEGG: tfu:Tfu_2571 methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; PRIAM: Methenyltetrahydrofolate cyclohydrolase; SPTR: C1YKN6 5,10-methylenetetrahydrofolate dehydrogenase (NADP+); methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_003681867.1	COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR002695:IPR013982:IPR011607; KEGG: tfu:Tfu_2572 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; PRIAM: IMP cyclohydrolase; SMART: AICARFT/IMPCHase bienzyme formylation region; SPTR: C1YKN5 IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
YP_003681868.1	COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR002376:IPR004607; KEGG: sro:Sros_1247  phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; SPTR: C1YKN4 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent
YP_003681869.1	KEGG: tfu:Tfu_2574 hypothetical protein; SPTR: C1YKN3  uncharacterized protein
YP_003681870.1	InterPro IPR003856; KEGG: tcu:Tcur_1010 lipopolysaccharide biosynthesis protein; PFAM: lipopolysaccharide biosynthesis protein; SPTR: C1YKN2 Chain length determinant protein; PFAM: Chain length determinant protein
YP_003681871.1	KEGG: sro:Sros_8591 hypothetical protein; SPTR: C1YKN1  uncharacterized protein
YP_003681872.1	InterPro IPR011009:IPR002575; KEGG: tcu:Tcur_1013 hypothetical protein; PFAM: aminoglycoside phosphotransferase; SPTR: C1YKN0 phosphotransferase family protein; PFAM: phosphotransferase enzyme family
YP_003681873.1	InterPro IPR000863; KEGG: sro:Sros_8593  deacetylase sulfotransferase; PFAM: sulfotransferase; SPTR: C1YKM9 Sulfotransferase family protein; PFAM: Sulfotransferase domain
YP_003681874.1	COGs: COG2244 membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: tcu:Tcur_1009 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: C1YKM8 membrane protein involved in the export of O-antigen and teichoic acid; PFAM: polysaccharide biosynthesis protein
YP_003681875.1	COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; InterPro IPR013969; KEGG: stp:Strop_1839 oligosaccharide biosynthesis Alg14-like protein; PFAM: oligosaccharide biosynthesis protein Alg14 like; SPTR: C1YKM7 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; PFAM: oligosaccharide biosynthesis protein Alg14 like
YP_003681876.1	COGs: COG5017 conserved hypothetical protein; InterPro IPR007235:IPR001173; KEGG: saq:Sare_1832 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; glycosyltransferase 28 domain; SPTR: C1YKM6 Uncharacterized conserved protein; PFAM: glycosyltransferase family 28 C-terminal domain; glycosyl transferase family 2
YP_003681877.1	InterPro IPR000182:IPR016181; KEGG: nfa:nfa35900  acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YKM5 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003681878.1	InterPro IPR013781:IPR017853; KEGG: sro:Sros_7663 hypothetical protein; SPTR: C1YKM4  uncharacterized protein; PFAM: glycosyl hydrolase family 26
YP_003681879.1	KEGG: sro:Sros_8599 hypothetical protein; SPTR: C1YKM3  uncharacterized protein; PFAM: Sulfotransferase domain
YP_003681880.1	InterPro IPR000209:IPR009020:IPR010259; KEGG: sen:SACE_7133 extracellular alkaline serine protease; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; proteinase inhibitor I9 subtilisin propeptide; SPTR: C1YKM2 Subtilisin-like serine protease; PFAM: peptidase inhibitor I9; Subtilase family
YP_003681881.1	COGs: COG2895 GTPase - sulfate adenylate transferase subunit 1; InterProIPR009001:IPR005225:IPR000795:IPR009000:IPR 011779:IPR004161; KEGG: tfu:Tfu_0420 sulfate adenylyltransferase subunit 1; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; PRIAM: sulfate adenylyltransferase; SPTR: C1YKM1 sulfate adenylyltransferase subunit 1; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein; PFAM: Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain
YP_003681882.1	COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500:IPR014729:IPR011784; KEGG: tfu:Tfu_0419 sulfate adenylyltransferase subunit 2; PFAM: phosphoadenosine phosphosulfate reductase; PRIAM: sulfate adenylyltransferase; SPTR: C1YKM0 sulfate adenylyltransferase subunit 2; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit
YP_003681883.1	COGs: COG1218 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR000760; KEGG: tfu:Tfu_0418 3'-phosphoadenosine 5'-phosphosulfate (PapS) 3'-phosphatase; PFAM: inositol monophosphatase; SPTR: C1YKL9 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; PFAM: inositol monophosphatase family
YP_003681884.1	COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR017475; KEGG: sro:Sros_8603 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; PRIAM: undecaprenyl-phosphate galactose phosphotransferase; SPTR: C1YKL8 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; undecaprenyl-phosphate galactose phosphotransferase, WbaP
YP_003681885.1	COGs: COG2761 dithiol-disulfide isomerase involved in polyketide biosynthesis; InterPro IPR001853:IPR011990:IPR012336:IPR013026; KEGG: sro:Sros_0904 dithiol-disulfide isomerase involved in polyketide biosynthesis-like protein; PFAM: DSBA oxidoreductase; SPTR: C1YKL7 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis; PFAM: DSBA-like thioredoxin domain
YP_003681886.1	InterPro IPR012287:IPR001647:IPR009057; KEGG: sro:Sros_0905  TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YKL6 transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003681887.1	COGs: COG2755 lysophospholipase L1 and related esterase; InterPro IPR001087:IPR013831:IPR013830; KEGG: svi:Svir_14350 lysophospholipase L1-like esterase; PFAM: lipolytic protein G-D-S-L family; SPTR: C1YKL5 lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/acylhydrolase
YP_003681888.1	COGs: COG1609 transcriptional regulators; InterPro IPR000843:IPR001761:IPR010982; KEGG: tfu:Tfu_2790 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: C1YKL4 LacI family transcriptional regulator; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003681889.1	COGs: COG3693 beta-1 4-xylanase; InterPro IPR013781:IPR001000:IPR017853; KEGG: tfu:Tfu_2791 xylanase; PFAM: glycoside hydrolase family 10; PRIAM: endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10; SPTR: C1YKL3 beta-1,4-xylanase (Fragment); PFAM: glycosyl hydrolase family 10
YP_003681890.1	COGs: COG0193 peptidyl-tRNA hydrolase; InterPro IPR001328:IPR018171; KEGG: tfu:Tfu_0417 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; PRIAM: aminoacyl-tRNA hydrolase; SPTR: C1YV62 peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase
YP_003681891.1	COGs: COG1825 ribosomal protein L25 (general stress protein Ctc); InterProIPR020056:IPR020057:IPR020055:IPR011035:IPR 001021; KEGG: tfu:Tfu_0416 50S ribosomal protein L25/general stress protein Ctc; PFAM: ribosomal protein L25-like; SPTR: C1YV61 50S ribosomal protein L25P; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form
YP_003681892.1	COGs: COG0462 phosphoribosylpyrophosphate synthetase; InterPro IPR000836:IPR005946:IPR000842; KEGG: tfu:Tfu_0415 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; PRIAM: ribose-phosphate diphosphokinase; SPTR: C1YV60 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase
YP_003681893.1	COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterPro IPR011004:IPR001228:IPR001451:IPR005882; KEGG: tfu:Tfu_0414 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase; PRIAM: glucosamine-1-phosphate N-acetyltransferase; SPTR: C1YV59 UDP-N-acetylglucosamine pyrophosphorylase; glucosamine-1-phosphate N-acetyltransferase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
YP_003681894.1	COGs: COG1398 Fatty-acid desaturase; InterPro IPR015876:IPR005804; KEGG: tfu:Tfu_0413 delta-9 acyl-phospholipid desaturase; PFAM: fatty acid desaturase; PRIAM: stearoyl-CoA 9-desaturase; SPTR: C1YV58 delta-9 acyl-phospholipid desaturase; PFAM: Fatty acid desaturase
YP_003681895.1	COGs: COG1309 transcriptional regulator; InterPro IPR012287:IPR001647:IPR009057; KEGG: tfu:Tfu_0412 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YV57 transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003681896.1	COGs: COG1846 transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: tfu:Tfu_0411 regulatory protein, MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YV56 MarR family transcriptional regulator; PFAM: MarR family
YP_003681897.1	InterPro IPR013830; KEGG: tfu:Tfu_0410 hypothetical protein; SPTR: C1YV55  uncharacterized protein
YP_003681898.1	COGs: COG0386 glutathione peroxidase; InterPro IPR000889:IPR012336:IPR012335; KEGG: cms:CMS_0708  glutathione peroxidase; PFAM: glutathione peroxidase; PRIAM: peroxiredoxin; SPTR: C1YV54 glutathione peroxidase; PFAM: glutathione peroxidase
YP_003681899.1	COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR017871:IPR003593:IPR003439; KEGG: tfu:Tfu_0409 ABC transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YV53 ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter
YP_003681900.1	COGs: COG2390 transcriptional regulator contains sigma factor-related N-terminal domain; InterPro IPR007324:IPR018126; KEGG: sgr:SGR_6064  transcriptional regulator; PFAM:  sugar-binding domain protein; SPTR: C1YV52 transcriptional regulator; PFAM:  sugar-binding domain
YP_003681901.1	COGs: COG1064 Zn-dependent alcohol dehydrogenase; InterProIPR011032:IPR016040:IPR013154:IPR013149:IPR 002328; KEGG: sen:SACE_4163 zinc-binding dehydrogenase; PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; SPTR: C1YV51 Zn-dependent alcohol dehydrogenase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase
YP_003681902.1	COGs: COG1653 ABC-type sugar transporter periplasmic component; InterPro IPR006059; KEGG: sen:SACE_4162 ABC sugar transporter substrate-binding component; PFAM: extracellular solute-binding protein family 1; SPTR: C1YV50 carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein
YP_003681903.1	COGs: COG1175 ABC-type sugar transporters permease components; InterPro IPR000515; KEGG: rop:ROP_25020  ABC transporter permease; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YV49 carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003681904.1	COGs: COG0395 ABC-type sugar transporter permease component; InterPro IPR000515; KEGG: sen:SACE_4160 ABC sugar transporter permease; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YV48 carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003681905.1	COGs: COG3958 transketolase C-terminal subunit; InterPro IPR009014:IPR005476:IPR005475:IPR015941; KEGG: sen:SACE_5762 transketolase B subunit; PFAM: transketolase; transketolase domain protein; SMART: transketolase; SPTR: C1YV47 transketolase subunit B; PFAM: transketolase, C-terminal domain; transketolase, pyrimidine binding domain
YP_003681906.1	COGs: COG3959 transketolase N-terminal subunit; InterPro IPR005474; KEGG: sgr:SGR_921  transketolase; PFAM: transketolase domain protein; SPTR: C1YV46 transketolase subunit beta; PFAM: transketolase, thiamine diphosphate binding domain
YP_003681907.1	COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; InterProIPR004424:IPR014721:IPR020568:IPR006204:IPR 013750; KEGG: tfu:Tfu_0407 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; PRIAM: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; SPTR: C1YV45 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase
YP_003681908.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR000719:IPR020635:IPR002290:IPR011009:IPR 017442:IPR017441:IPR008271; KEGG: tfu:Tfu_0406 tyrosine protein kinase:serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: C1YV44 serine/threonine protein kinase; PFAM: protein kinase domain
YP_003681909.1	COGs: COG0519 GMP synthase PP-ATPase domain/subunit; InterProIPR014729:IPR017926:IPR000991:IPR018318:IPR 001674:IPR004739:IPR011702:IPR006220:IPR001317; KEGG: tfu:Tfu_2589 GMP synthase; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; tRNA methyl transferase-like; SPTR: C1YV43 GMP synthase (glutamine-hydrolyzing); TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or subunit beta; GMP synthase (glutamine-hydrolyzing), N-terminal domain or subunit alpha
YP_003681910.1	COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR016040:IPR001509:IPR005886:IPR008089; KEGG: tfu:Tfu_2591 UDP-galactose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YV42 UDP-galactose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase
YP_003681911.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594; KEGG: kra:Krad_1351 integral membrane sensor signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C1YV41 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase
YP_003681912.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR011991:IPR000792:IPR001789:IPR011006:IPR 016032; KEGG: mlu:Mlut_21900 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YV40 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003681913.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: kse:Ksed_23680 ABC-type multidrug transporter ATPase component; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YV39 ABC-type multidrug transporter ATPase component; PFAM: ABC transporter
YP_003681914.1	KEGG: kse:Ksed_23690 hypothetical protein; SPTR: C1YV38  uncharacterized protein
YP_003681915.1	COGs: COG4200 conserved hypothetical protein; KEGG: kse:Ksed_23700 hypothetical protein; SPTR: C1YV37 Uncharacterized conserved protein
YP_003681916.1	COGs: COG2374 extracellular nuclease; InterPro IPR005135; KEGG: sgr:SGR_1342  endonuclease/exonuclease/phosphatase family protein; PFAM: endonuclease/exonuclease/phosphatase; SPTR: C1YV36 Predicted extracellular nuclease; PFAM: endonuclease/exonuclease/phosphatase family
YP_003681917.1	COGs: COG4639 kinase; InterPro IPR004843; KEGG: tcu:Tcur_1723 bis(5'-nucleosyl)-tetraphosphatase(asymmetrical); PFAM: metallophosphoesterase; SPTR: C1YV35 Predicted kinase, COG4639; PFAM: Calcineurin-like phosphoesterase; Chromatin associated protein KTI12
YP_003681918.1	KEGG: tcu:Tcur_1722 methyltransferase type 12; SPTR: C1YV34  uncharacterized protein
YP_003681919.1	KEGG: sco:SCO4053 transport integral membrane protein; SPTR: C1YV33  uncharacterized protein
YP_003681920.1	KEGG: tfu:Tfu_2138 hypothetical protein; SPTR: C1YV32  uncharacterized protein
YP_003681921.1	COGs: COG0614 ABC-type Fe3+-hydroxamate transporter periplasmic component; InterPro IPR002491; KEGG: fre:Franean1_5939 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: C1YV31 ABC-type Fe3+-hydroxamate transporter periplasmic component; PFAM: Periplasmic binding protein
YP_003681922.1	COGs: COG0578 glycerol-3-phosphate dehydrogenase; InterPro IPR000447:IPR006076; KEGG: tfu:Tfu_2593 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: C1YV30 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_003681923.1	KEGG: fal:FRAAL0341  MFS transporter protein; SPTR: C1YV29  uncharacterized protein
YP_003681924.1	COGs: COG2951 membrane-bound lytic murein transglycosylase B; KEGG: tfu:Tfu_2594 membrane-bound lytic murein transglycosylase B; SPTR: C1YV28  uncharacterized protein
YP_003681925.1	COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR013785:IPR001093:IPR005992:IPR001412; KEGG: tfu:Tfu_2595 inosine 5-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; SPTR: C1YSM7 IMP dehydrogenase family protein; TIGRFAM: IMP dehydrogenase family protein; PFAM: IMP dehydrogenase / GMP reductase domain; TIGRFAM: IMP dehydrogenase family protein
YP_003681926.1	COGs: COG0516 IMP dehydrogenase/GMP reductase; InterProIPR000644:IPR001093:IPR018529:IPR005990:IPR 013785:IPR015875; KEGG: tfu:Tfu_2596 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; hypothetical protein; PRIAM: IMP dehydrogenase; SMART: hypothetical protein; SPTR: C1YSM6 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase
YP_003681927.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013325:IPR013324:IPR007627:IPR007630:IPR 014284; KEGG: tfu:Tfu_2597 RNA polymerase sigma factor SigD; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; SPTR: C1YSM5 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003681928.1	COGs: COG0459 chaperonin GroEL (HSP60 family); InterPro IPR001844:IPR018370:IPR002423; KEGG: tfu:Tfu_2598 chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; SPTR: C1YSM4 60 kDa chaperonin; TIGRFAM: chaperonin GroEL; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL
YP_003681929.1	COGs: COG0234 Co-chaperonin GroES (HSP10); InterPro IPR020818:IPR011032:IPR018369:IPR001476; KEGG: tfu:Tfu_2599 10 kD chaperone; PFAM: chaperonin Cpn10; SPTR: C1YSM3 10 kDa chaperonin; PFAM: chaperonin 10 Kd subunit
YP_003681930.1	KEGG: tfu:Tfu_2600 hypothetical protein; SPTR: C1YSM2  uncharacterized protein
YP_003681931.1	KEGG: tfu:Tfu_2601 hypothetical protein; SPTR: C1YSM1  uncharacterized protein
YP_003681932.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR016040:IPR013149:IPR011032:IPR013154; KEGG: tcu:Tcur_3680 alcohol dehydrogenase zinc-binding domain protein; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; SPTR: C1YSM0 Zn-dependent oxidoreductase, NADPH:quinone reductase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003681933.1	KEGG: nfa:nfa23340 hypothetical protein; SPTR: C1YSL9  uncharacterized protein
YP_003681934.1	COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086:IPR015797:IPR020084; KEGG: sro:Sros_7559 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: C1YSL8 ADP-ribose pyrophosphatase; PFAM: NUDIX domain
YP_003681935.1	KEGG: sro:Sros_7562 hypothetical protein; SPTR: C1YSL7  uncharacterized protein
YP_003681936.1	KEGG: sgr:SGR_2710 hypothetical protein; SPTR: C1YSL6  uncharacterized protein
YP_003681937.1	COGs: COG0775 nucleoside phosphorylase; InterPro IPR000845; KEGG: ter:Tery_1432 purine phosphorylases family protein 1; PFAM: purine or other phosphorylase family 1; SPTR: C1YSL5 nucleoside phosphorylase; PFAM: phosphorylase superfamily
YP_003681938.1	InterPro IPR007278; KEGG: tfu:Tfu_0262 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YSL4  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003681939.1	KEGG: ZCCHC2; zinc finger, CCHC domain containing 2; SPTR: C1YSL3  uncharacterized protein
YP_003681940.1	KEGG: tcu:Tcur_4053 hypothetical protein; SPTR: C1YSL2  uncharacterized protein
YP_003681941.1	COGs: COG1414 transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: sco:SCO2544 IclR family transcriptional regulator; PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; SPTR: C1YSL1 IclR family transcriptional regulator; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_003681942.1	COGs: COG0329 dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220:IPR013785; KEGG: sco:SCO2543 5-dehydro-4-deoxyglucarate dehydratase; PFAM: dihydrodipicolinate synthetase; SPTR: C1YSL0 dihydrodipicolinate synthase/N-acetylneuraminate lyase; PFAM: dihydrodipicolinate synthetase family
YP_003681943.1	COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: ami:Amir_5482 gluconate transporter; PFAM: gluconate transporter; SPTR: C1YSK9 gluconate transporter; TIGRFAM: gluconate transporter; PFAM: GntP family permease; TIGRFAM: gluconate transporter
YP_003681944.1	COGs: COG0533 metal-dependent protease with chaperone activity; InterPro IPR017861:IPR000905:IPR017860; KEGG: tfu:Tfu_2602 O-sialoglycoprotein endopeptidase; PFAM: peptidase M22 glycoprotease; PRIAM: O-sialoglycoprotein endopeptidase; SPTR: C1YSK8 O-sialoglycoprotein endopeptidase; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: glycoprotease family; TIGRFAM: metalloendopeptidase, , glycoprotease family
YP_003681945.1	COGs: COG0456 acetyltransferase; InterPro IPR016181:IPR000182:IPR006464; KEGG: tfu:Tfu_2603 30S ribosomal protein S18P alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YSK7 (30S ribosomal protein S18P)-alanine acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase
YP_003681946.1	COGs: COG1214 Inactive homolog of metal-dependent protease  molecular chaperone; InterPro IPR000905; KEGG: tfu:Tfu_2604 hypothetical protein; PFAM: peptidase M22 glycoprotease; SPTR: C1YSK6  molecular chaperone similar to inactive metal-dependent protease; PFAM: glycoprotease family
YP_003681947.1	COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: tfu:Tfu_2605 hypothetical protein; PFAM: protein of unknown function UPF0079; SPTR: C1YSK5 Conserved hypothetical nucleotide-binding protein; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: conserved hypothetical nucleotide-binding protein
YP_003681948.1	COGs: COG0787 alanine racemase; InterProIPR000821:IPR020622:IPR011079:IPR001608:IPR 009006; KEGG: tfu:Tfu_2606 alanine racemase; PFAM: alanine racemase; PRIAM: alanine racemase; SPTR: C1YSK4 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase, C-terminal domain; alanine racemase, N-terminal domain; TIGRFAM: alanine racemase
YP_003681949.1	KEGG: ami:Amir_2394 hypothetical protein; SPTR: C1YSK3  uncharacterized protein
YP_003681950.1	KEGG: bbt:BBta_0057 translation initiation factor IF-2; SPTR: C1YSK1  uncharacterized protein
YP_003681951.1	KEGG: sen:SACE_0588 hypothetical protein; SPTR: C1YSK0  uncharacterized protein
YP_003681952.1	KEGG: sen:SACE_0587 hypothetical protein; SPTR: C1YSJ9  uncharacterized protein
YP_003681953.1	KEGG: svi:Svir_23500 hypothetical protein; SPTR: C1YSJ8  uncharacterized protein
YP_003681954.1	KEGG: sma:SAV_5443 hypothetical protein; SPTR: C1YSD7  uncharacterized protein
YP_003681955.1	COGs: COG1940 transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: xce:Xcel_2402 ROK family protein; PFAM: ROK family protein; SPTR: C1YSD6 transcriptional regulator/sugar kinase; PFAM: ROK family
YP_003681956.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683:IPR004104; KEGG: aau:AAur_1886 oxidoreductase family protein; PFAM: oxidoreductase domain protein; oxidoreductase domain; SPTR: C1YSD5 Predicted dehydrogenase; PFAM: oxidoreductase family, C-terminal alpha/beta domain; oxidoreductase family, NAD-binding Rossmann fold
YP_003681957.1	COGs: COG1129 ABC-type sugar transporter ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: svi:Svir_12280 monosaccharide ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YSD4 Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter
YP_003681958.1	COGs: COG1172 ribose/xylose/arabinose/galactoside ABC-type transporters permeases; InterPro IPR001851; KEGG: svi:Svir_12300 monosaccharide ABC transporter membrane protein; PFAM: inner-membrane translocator; SPTR: C1YSD3 Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: Branched-chain amino acid transport system / permease
YP_003681959.1	COGs: COG1172 ribose/xylose/arabinose/galactoside ABC-type transporters permeases; InterPro IPR001851; KEGG: svi:Svir_12310 monosaccharide ABC transporter membrane protein; PFAM: inner-membrane translocator; SPTR: C1YSD2 Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: Branched-chain amino acid transport system / permease
YP_003681960.1	COGs: COG1879 ABC-type sugar transporter periplasmic component; KEGG: svi:Svir_12320 monosaccharide-binding protein; SPTR: C1YSD1 Monosaccharide ABC transporter substrate-binding protein, CUT2 family
YP_003681961.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR013022:IPR012307; KEGG: svi:Svir_12330 sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase domain protein TIM barrel; SPTR: C1YSJ7 Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel
YP_003681962.1	KEGG: fre:Franean1_0937 type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: C1YSJ6  uncharacterized protein
YP_003681963.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR013022:IPR011418:IPR012307; KEGG: xce:Xcel_2397 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain protein TIM barrel; AP endonuclease 2 domain protein; SPTR: C1YSJ5 Sugar phosphate isomerase/epimerase; PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel
YP_003681964.1	KEGG: dvl:Dvul_1394 ModE family transcriptional regulator; SPTR: C1YSJ4  uncharacterized protein
YP_003681965.1	KEGG: nfa:nfa47700 hypothetical protein; SPTR: C1YSJ3  uncharacterized protein
YP_003681966.1	KEGG: tcu:Tcur_0272 hypothetical protein; SPTR: C1YSJ2  uncharacterized protein
YP_003681967.1	COGs: COG0288 carbonic anhydrase; InterPro IPR001765:IPR017909:IPR006311:IPR015892; KEGG: mno:Mnod_1487 carbonic anhydrase; PFAM: carbonic anhydrase; SPTR: C1YSJ1 carbonic anhydrase; PFAM: carbonic anhydrase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003681968.1	InterProIPR012287:IPR015893:IPR001647:IPR011075:IPR 009057; KEGG: sen:SACE_3541 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YSJ0 transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family; YsiA-like protein, C-terminal region
YP_003681969.1	COGs: COG3300 MHYT domain (predicted integral membrane sensor domain); InterPro IPR005330; KEGG: tcu:Tcur_3716  integral membrane sensor protein; PFAM: MHYT domain protein; SPTR: C1YSI9 MHYT domain-containing protein; PFAM: Bacterial signalling protein N terminal repeat
YP_003681970.1	COGs: COG1162 GTPase; InterPro IPR010914:IPR004881; KEGG: sro:Sros_6690 ribosome-associated GTPase; PFAM: GTPase EngC; SPTR: C1YSI8 Predicted GTPase; PFAM: protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A
YP_003681971.1	COGs: COG0084 Mg-dependent DNase; InterPro IPR015991:IPR001130:IPR012278; KEGG: tfu:Tfu_0398 TatD-related deoxyribonuclease; PFAM: TatD-related deoxyribonuclease; SPTR: C1YSI7 Hydrolase, TatD family; TIGRFAM: hydrolase, TatD family; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_003681972.1	COGs: COG0143 Methionyl-tRNA synthetase; InterProIPR014758:IPR015413:IPR014729:IPR002304:IPR 009080; KEGG: tfu:Tfu_0389 methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); PRIAM: methionine--tRNA ligase; SPTR: C1YSI6 Methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetases class I (M); TIGRFAM: methionyl-tRNA synthetase
YP_003681973.1	KEGG: hypothetical protein; SPTR: C1YSI5  uncharacterized protein
YP_003681974.1	COGs: COG0342 Preprotein translocase subunit SecD; InterPro IPR003335:IPR005791:IPR005665; KEGG: tfu:Tfu_0387 bifunctional preprotein translocase subunit SecD/SecF; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: C1YSI4 protein-export membrane protein SecF/protein-export membrane protein SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF
YP_003681975.1	COGs: COG2013 conserved hypothetical protein; InterPro IPR016031:IPR002838; KEGG: tfu:Tfu_0236 hypothetical protein; PFAM: protein of unknown function DUF124; SPTR: C1YSI3 Uncharacterized conserved protein; PFAM: protein of unknown function DUF124
YP_003681976.1	COGs: COG0313 methyltransferase; InterPro IPR014777:IPR000878:IPR008189; KEGG: tfu:Tfu_0386 hypothetical protein; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: C1YSI2  uncharacterized protein; PFAM: Tetrapyrrole (Corrin/Porphyrin) methylases; TIGRFAM: conserved hypothetical protein TIGR00096
YP_003681977.1	InterPro IPR003615:IPR002711; KEGG: sro:Sros_1893 HNH endonuclease domain protein; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: C1YSI1 Restriction endonuclease; PFAM: HNH endonuclease
YP_003681978.1	COGs: COG1928 Dolichyl-phosphate-mannose--protein O-mannosyl transferase; InterPro IPR003342; KEGG: tfu:Tfu_0385  integral membrane protein; PFAM: glycosyl transferase family 39; SPTR: C1YSI0 Dolichyl-phosphate-mannose--protein O-mannosyl transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase
YP_003681979.1	COGs: COG1278 Cold shock protein; InterProIPR012156:IPR011129:IPR002059:IPR012340:IPR 016027:IPR019844; KEGG: tfu:Tfu_0384 cold-shock DNA-binding protein family protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: C1YSH9 Cold-shock DNA-binding protein family; PFAM: 'Cold-shock' DNA-binding domain
YP_003681980.1	InterPro IPR018448:IPR003998:IPR003369; KEGG: tfu:Tfu_0381 sec-independent translocase; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: C1YSH8 Twin arginine-targeting protein translocase TatB; TIGRFAM: twin-arginine translocation protein, Tatsubunit beta; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase TatB
YP_003681981.1	KEGG: tfu:Tfu_0380 hypothetical protein; SPTR: C1YSH7  uncharacterized protein
YP_003681982.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792:IPR001789:IPR011991:IPR011006; KEGG: tfu:Tfu_2491 LuxR response regulator receiver; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YSH6 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003681983.1	InterPro IPR012287:IPR001647:IPR009057; KEGG: krh:KRH_07250 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YSH5 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003681984.1	KEGG: tfu:Tfu_0378 hypothetical protein; SPTR: C1YSH4  uncharacterized protein
YP_003681985.1	COGs: COG1670 acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR016181:IPR000182; KEGG: tfu:Tfu_0377 ribosomal-protein-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YSH3 acetyltransferase, ribosomal protein N-acetylase
YP_003681986.1	COGs: COG0521 Molybdopterin biosynthesis protein; InterPro IPR001453:IPR020817:IPR008284; KEGG: tfu:Tfu_0376 molybdopterin adenylyltransferase; PFAM: molybdopterin binding domain; SPTR: C1YSH2 Molybdopterin adenylyltransferase; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain
YP_003681987.1	COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR002820; KEGG: tfu:Tfu_0375 molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; SPTR: C1YSH1 GTP cyclohydrolase subunit MoaC; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC
YP_003681988.1	COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR001453:IPR005110:IPR005111:IPR020817; KEGG: tfu:Tfu_0374 molybdopterin molybdochelatase; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; SPTR: C1YSH0 Molybdopterin molybdochelatase; TIGRFAM: molybdenum cofactor synthesis protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain
YP_003681989.1	COGs: COG1210 UDP-glucose pyrophosphorylase; InterPro IPR005835:IPR005771; KEGG: tfu:Tfu_0373 UDP-glucose pyrophosphorylase; PFAM: nucleotidyl transferase; SPTR: C1YSG9 UDP-glucose pyrophosphorylase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase
YP_003681990.1	COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: tfu:Tfu_0372 hypothetical protein; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: C1YSG8 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase
YP_003681991.1	COGs: COG2331 conserved hypothetical protein; InterPro IPR013429; KEGG: cai:Caci_0108 regulatory protein, FmdB family; PFAM:  regulatory protein FmdB; SPTR: C1YSG7  regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: Zinc ribbon domain; TIGRFAM:  regulatory protein, FmdB family
YP_003681992.1	InterPro IPR013974; KEGG: tfu:Tfu_0369 hypothetical protein; PFAM: SAF domain protein; SMART: SAF domain protein; SPTR: C1YSG6 Flp pilus assembly protein CpaB; PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB
YP_003681993.1	COGs: COG1970 Large-conductance mechanosensitive channel; InterPro IPR001185; KEGG: tcu:Tcur_0902 large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; SPTR: C1YSG5 Large conductance mechanosensitive channel protein; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein
YP_003681994.1	InterPro IPR003709; KEGG: tfu:Tfu_0368 hypothetical protein; PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; SPTR: C1YSG4 D-alanyl-D-alanine carboxypeptidase; PFAM: D-alanyl-D-alanine carboxypeptidase
YP_003681995.1	InterPro IPR012287:IPR001647:IPR009057; KEGG: sco:SCO2815 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YSG3 transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003681996.1	COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR006076:IPR003042; KEGG: nfa:nfa20780  monooxygenase; PFAM: FAD dependent oxidoreductase; SPTR: C1YSG2 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain
YP_003681997.1	KEGG: similar to heparan sulfate 3-O-sulfotransferase 2; SPTR: C1YSG1  uncharacterized protein
YP_003681998.1	COGs: COG1502 phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: tfu:Tfu_2817 phospholipase D/transphosphatidylase; PFAM: phospholipase D/transphosphatidylase; SPTR: C1YSG0 phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase
YP_003681999.1	COGs: COG2226 methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: tfu:Tfu_0944 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; PFAM: methyltransferase type 11; SPTR: C1YSF9 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain
YP_003682000.1	KEGG: ccu:Ccur_11780 ubiquinone/menaquinone biosynthesis methyltransferase; SPTR: C1YSF8  uncharacterized protein; PFAM: methyltransferase domain
YP_003682001.1	KEGG: tfu:Tfu_0736 hypothetical protein; SPTR: C1YSF7  uncharacterized protein
YP_003682002.1	KEGG: tfu:Tfu_0736 hypothetical protein; SPTR: C1YSF6  uncharacterized protein
YP_003682003.1	KEGG: tfu:Tfu_0736 hypothetical protein; SPTR: C1YSF5  uncharacterized protein
YP_003682004.1	InterPro IPR011761; KEGG: tfu:Tfu_0737 hypothetical protein; SPTR: C1YSF4 glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase)
YP_003682005.1	InterPro IPR017850:IPR017849; KEGG: tfu:Tfu_0738 hypothetical protein; SPTR: C1YSF3  uncharacterized protein; PFAM: Sulfatase
YP_003682006.1	COGs: COG0635 coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR006638:IPR007197:IPR010723; KEGG: tfu:Tfu_0739 coproporphyrinogen III oxidase; PFAM: radical SAM protein; HemN domain protein; PRIAM: coproporphyrinogen dehydrogenase; SMART: Elongator protein 3/MiaB/NifB; SPTR: C1YSF2 coproporphyrinogen III oxidase anaerobic; PFAM: radical SAM superfamily; HemN C-terminal region
YP_003682007.1	KEGG: tfu:Tfu_0740 hypothetical protein; SPTR: C1YSF1  uncharacterized protein
YP_003682008.1	COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR006379:IPR013200; KEGG: sma:SAV_4256 hypothetical protein; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; SPTR: C1YSE9 HAD-superfamily hydrolase, subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB
YP_003682009.1	InterPro IPR018656; KEGG: sgr:SGR_509 hypothetical protein; PFAM: protein of unknown function DUF2087; SPTR: C1YSE8 Uncharacterized conserved protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2087)
YP_003682010.1	COGs: COG1802 transcriptional regulators; InterPro IPR011711:IPR000524:IPR011991; KEGG: sco:SCO6565 transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH; SPTR: C1YSF0 transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003682011.1	COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR005110:IPR001453:IPR005111; KEGG: tfu:Tfu_2115  molybdopterin biosynthesis protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; SMART: molybdopterin binding domain; SPTR: C1YSE7 Molybdopterin biosynthesis enzyme; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain
YP_003682012.1	COGs: COG1893 Ketopantoate reductase; InterProIPR016040:IPR013332:IPR013752:IPR008927:IPR 003710:IPR013328; KEGG: sco:SCO6562 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase; PRIAM: 2-dehydropantoate 2-reductase; SPTR: C1YSE6 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase
YP_003682013.1	COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterPro IPR009010:IPR006656:IPR006657; KEGG: sma:SAV_1834 formate dehydrogenase, major subunit (formate dehydrogenase alpha subunit); PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: C1YSE5 Uncharacterized anaerobic dehydrogenase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: formate dehydrogenase, subunit alpha, archaeal-type
YP_003682014.1	COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR012335:IPR012336:IPR002023:IPR011538:IPR 019554:IPR019575:IPR001949; KEGG: sma:SAV_1835 NADH dehydrogenase I chain F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SPTR: C1YSE4 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain
YP_003682015.1	COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR001041:IPR017896:IPR006655:IPR001450:IPR 017900:IPR006963; KEGG: sma:SAV_1836 NADH dehydrogenase I chain G; PFAM: molybdopterin oxidoreductase Fe4S4 region; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C1YSE3 Uncharacterized anaerobic dehydrogenase; PFAM: 2Fe-2S iron-sulfur cluster binding domain; 4Fe-4S binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_003682016.1	COGs: COG1526 Uncharacterized protein required for formate dehydrogenase activity; InterPro IPR003786; KEGG: msm:MSMEG_0165 formate dehydrogenase accessory protein; PFAM: formate dehydrogenase subunit FdhD; SPTR: C1YSE2 formate dehydrogenase family accessory protein FdhD; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD
YP_003682017.1	COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterProIPR016040:IPR005810:IPR016102:IPR003781:IPR 017440:IPR005811; KEGG: tfu:Tfu_2576 succinyl-CoA synthetase subunit alpha; PFAM: CoA-binding protein; ATP-citrate lyase/succinyl-CoA ligase; SMART: CoA-binding protein; SPTR: C1YSE0 Succinyl-CoA ligase [ADP-forming] subunit alpha; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, subunit alpha
YP_003682018.1	COGs: COG0045 Succinyl-CoA synthetase beta subunit; InterProIPR013816:IPR016102:IPR011761:IPR013650:IPR 005811:IPR005809:IPR017866; KEGG: tfu:Tfu_2577 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: succinate--CoA ligase (ADP-forming); SPTR: C1YSD9 Succinyl-CoA synthetase (ADP-forming) subunit beta; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, subunit beta
YP_003682019.1	InterPro IPR016196; KEGG: msm:MSMEG_0164 transmembrane transporter; SPTR: C1YSD8  uncharacterized protein (Fragment); PFAM: Major Facilitator Superfamily
YP_003682020.1	InterPro IPR016196:IPR005829; KEGG: msm:MSMEG_0164 transmembrane transporter; SPTR: C1YG66 Major Facilitator Superfamily transporter; PFAM: Major Facilitator Superfamily
YP_003682021.1	COGs: COG0028 thiamine pyrophosphate-requiring protein; InterPro IPR011766:IPR012000:IPR000399:IPR012001; KEGG: sco:SCO6584 TPP-requiring enzyme; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; SPTR: C1YG65 thiamine pyrophosphate-dependent enzyme, carboligase or decarboxylase; PFAM: thiamine pyrophosphate enzyme, central domain; thiamine pyrophosphate enzyme, N-terminal TPP binding domain; thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_003682022.1	COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR017659:IPR003673; KEGG: sma:SAV_1820 formyl-coenzyme A transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: C1YG64 Formyl-CoA transferase; TIGRFAM: formyl-CoA transferase; PFAM: CoA-transferase family III; TIGRFAM: formyl-CoA transferase
YP_003682023.1	COGs: COG1042 acyl-CoA synthetase (NDP forming); InterPro IPR016040:IPR016102:IPR003781:IPR011761; KEGG: sco:SCO6582 hypothetical protein; PFAM: CoA-binding protein; SMART: CoA-binding domain protein; SPTR: C1YG63 acyl-CoA synthetase (NDP forming); PFAM: CoA binding domain
YP_003682024.1	KEGG: rxy:Rxyl_0924 hypothetical protein; SPTR: C1YG62  uncharacterized protein
YP_003682025.1	KEGG: rxy:Rxyl_0925 hypothetical protein; SPTR: C1YG61  uncharacterized protein
YP_003682026.1	COGs: COG2076 membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: tfu:Tfu_1261 small multidrug resistance efflux protein; PFAM: small multidrug resistance protein; SPTR: C1YG60 Cation/cationic drug transporter; PFAM: Small Multidrug Resistance protein
YP_003682027.1	COGs: COG3162 membrane protein; InterPro IPR007436; KEGG: sro:Sros_6315 membrane protein-like protein; PFAM: protein of unknown function DUF485; SPTR: C1YG59 Predicted membrane protein; PFAM: protein of unknown function, DUF485
YP_003682028.1	COGs: COG4147 symporter; InterPro IPR019900:IPR001734; KEGG: saq:Sare_5018 SSS family solute/sodium (Na+) symporter; PFAM: Na+/solute symporter; SPTR: C1YG58 SSS sodium solute transporter; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Sodium:solute symporter family; TIGRFAM: SSS sodium solute transporter superfamily
YP_003682029.1	COGs: COG3275  regulator of cell autolysis; InterPro IPR010559:IPR003594; KEGG: svi:Svir_12150  regulator of cell autolysis; PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YG57  regulator of cell autolysis; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003682030.1	COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492:IPR011006; KEGG: svi:Svir_12140 response regulator of the LytR/AlgR family; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; SPTR: C1YG56 Response regulator of the LytR/AlgR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain
YP_003682031.1	KEGG: sen:SACE_4726 hypothetical protein; SPTR: C1YG55  uncharacterized protein; PFAM: protein of unknown function, DUF485
YP_003682032.1	COGs: COG4147 symporter; InterPro IPR001734:IPR018212; KEGG: svi:Svir_12120 predicted symporter; PFAM: Na+/solute symporter; SPTR: C1YG54 Predicted symporter; PFAM: Sodium:solute symporter family
YP_003682033.1	KEGG: PHC10; cell wall protein pherophorin-C10; SPTR: C1YG53  uncharacterized protein
YP_003682034.1	KEGG: sro:Sros_9307 hypothetical protein; SPTR: C1YG52  uncharacterized protein
YP_003682035.1	COGs: COG0623 enoyl-(acyl-carrier-protein); InterPro IPR016040:IPR002198; KEGG: nml:Namu_2302 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YG51 enoyl-(acyl-carrier-protein) reductase (NADH); PFAM: short chain dehydrogenase
YP_003682036.1	InterPro IPR003594; KEGG: sro:Sros_3148  anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: C1YG50 histidine kinase; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003682037.1	InterPro IPR001387:IPR010982; KEGG: tfu:Tfu_1656 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YG49 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003682038.1	InterPro IPR007278; KEGG: tfu:Tfu_0262 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YFW1  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003682039.1	KEGG: Gm3773; predicted gene 3773; SPTR: C1YFV9  uncharacterized protein
YP_003682040.1	KEGG: tfu:Tfu_1352 hypothetical protein; SPTR: C1YG48  uncharacterized protein
YP_003682041.1	KEGG: tfu:Tfu_1892 hypothetical protein; SPTR: C1YG47  uncharacterized protein
YP_003682042.1	KEGG: cbk:CLL_A2561 permease; SPTR: Q0TWH8  uncharacterized protein
YP_003682043.1	COGs: COG3209 Rhs family protein; InterPro IPR006530; KEGG: sco:SCO0072 secreted protein; PFAM: hypotheticalprotein; SPTR: C1YG46 Rhs family protein; TIGRFAM: hypothetical protein; PFAM: RHS Repeat; TIGRFAM: YD repeat (two copies)
YP_003682044.1	COGs: COG1274 phosphoenolpyruvate carboxykinase (GTP); InterPro IPR008209:IPR008210:IPR013035:IPR018091; KEGG: tfu:Tfu_0083 phosphoenolpyruvate carboxykinase; PFAM: phosphoenolpyruvate carboxykinase (GTP); PRIAM: phosphoenolpyruvate carboxykinase (GTP); SPTR: C1YG45 phosphoenolpyruvate carboxykinase (GTP); PFAM: phosphoenolpyruvate carboxykinase
YP_003682045.1	InterPro IPR006015:IPR014729:IPR006016; KEGG: tfu:Tfu_0357 hypothetical protein; PFAM: UspA domain protein; SPTR: C1YG44 Universal stress protein UspA-like protein; PFAM: Universal stress protein family
YP_003682046.1	KEGG: sro:Sros_2660 hypothetical protein; SPTR: C1YG43  uncharacterized protein
YP_003682047.1	COGs: COG3973 Superfamily I DNA and RNA helicase; KEGG: sgr:SGR_3188  ATP-dependent DNA helicase; SPTR: C1YG42 DNA/RNA helicase, superfamily I
YP_003682048.1	KEGG: sro:Sros_5835 hypothetical protein; SPTR: C1YG41  uncharacterized protein
YP_003682049.1	COGs: COG1072 Panthothenate kinase; InterPro IPR004566:IPR006083; KEGG: tfu:Tfu_2610 pantothenate kinase; PFAM: phosphoribulokinase/uridine kinase; SPTR: C1YG39 Pantothenate kinase; TIGRFAM: pantothenate kinase; PFAM: phosphoribulokinase / Uridine kinase family; TIGRFAM: pantothenate kinase, bacterial type
YP_003682050.1	COGs: COG0449 glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; InterPro IPR017932:IPR000583:IPR001347:IPR005855; KEGG: tfu:Tfu_2611 glucosamine--fructose-6-phosphate aminotransferase; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; SPTR: C1YG03 glutamine--fructose-6-phosphate transaminase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: SIS domain; glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
YP_003682051.1	InterPro IPR002645:IPR003658; KEGG: tfu:Tfu_0333 anti-sigma factor antagonist; PFAM: sulfate transporter/antisigma-factor antagonist STAS; SPTR: C1YG00 anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_003682052.1	InterPro IPR003594; KEGG: tfu:Tfu_2307  regulator; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YG40 histidine kinase; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003682053.1	InterPro IPR001387; KEGG: sro:Sros_7488 hypothetical protein; SMART: helix-turn-helix domain protein; SPTR: C1YG38  uncharacterized protein
YP_003682054.1	InterPro IPR007278; KEGG: sro:Sros_5628 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YG37  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003682055.1	COGs: COG1509 lysine 2 3-aminomutase; KEGG: mxa:MXAN_6263 hypothetical protein; SPTR: C1YG36 L-lysine 2,3-aminomutase; TIGRFAM: KamA family protein
YP_003682056.1	COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme; InterPro IPR012281:IPR003664; KEGG: tfu:Tfu_0271 phosphate:acyl-[acyl carrier protein] acyltransferase; PFAM: fatty acid synthesis plsX protein; SPTR: C1YG35 Fatty acid/phospholipid synthesis protein PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX
YP_003682057.1	COGs: COG0018 Arginyl-tRNA synthetase; InterProIPR015945:IPR014729:IPR008909:IPR009080:IPR 001412:IPR005148:IPR001278; KEGG: tfu:Tfu_0269 arginyl-tRNA synthetase; PFAM: Arginyl-tRNA synthetase, class Ic, core; DALR anticodon binding domain protein; arginyl tRNA synthetase domain protein; PRIAM: Arginine--tRNA ligase; SMART: DALR anticodon binding domain protein; SPTR: C1YG34 Arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase
YP_003682058.1	COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: tfu:Tfu_0268 hypothetical protein; PFAM: YceI family protein; SMART: YceI family protein; SPTR: C1YG33 Uncharacterized conserved protein; PFAM: YceI-like domain
YP_003682059.1	COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611:IPR011877:IPR002139; KEGG: tfu:Tfu_0259 ribokinase; PFAM: PfkB domain protein; SPTR: C1YG32 ribokinase; TIGRFAM: ribokinase; PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase
YP_003682060.1	COGs: COG0708 exonuclease III; InterPro IPR004808:IPR005135:IPR000097; KEGG: tfu:Tfu_0258 exodeoxyribonuclease III; PFAM: endonuclease/exonuclease/phosphatase; SPTR: C1YG31 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: endonuclease/exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth)
YP_003682061.1	InterPro IPR015315; KEGG: cai:Caci_4588 protein of unknown function DUF1963; SPTR: C1YG30  uncharacterized protein
YP_003682062.1	COGs: COG3214 conserved hypothetical protein; InterPro IPR009351; KEGG: tfu:Tfu_0254 hypothetical protein; PFAM: protein of unknown function DUF1006; SPTR: C1YG29 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF1006)
YP_003682063.1	COGs: COG0183 acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016038:IPR016039; KEGG: tfu:Tfu_0253 acetyl-CoA acetyltransferase; SPTR: C1YG28 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase, C-terminal domain; thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_003682064.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR004638:IPR001411:IPR011701:IPR016196; KEGG: sro:Sros_8653 arabinose efflux permease-like protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YG27 Drug resistance transporter EmrB/QacA subfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily
YP_003682065.1	COGs: COG1960 acyl-CoA dehydrogenase; InterProIPR013786:IPR006091:IPR006089:IPR006090:IPR 009100:IPR009075:IPR006092:IPR013764; KEGG: sro:Sros_1015 acyl-CoA dehydrogenase domain-containing protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: C1YG26 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain
YP_003682066.1	KEGG: tfu:Tfu_0252 hypothetical protein; SPTR: C1YG25  uncharacterized protein
YP_003682067.1	COGs: COG2208 serine phosphatase RsbU regulator of sigma subunit; InterProIPR010822:IPR013767:IPR000014:IPR001932:IPR 001610:IPR003018; KEGG: tfu:Tfu_0250 PAS containing protein phosphatase 2C-like; PFAM: stage II sporulation E family protein; PAS fold domain protein; GAF domain protein; SMART: protein phosphatase 2C domain protein; PAS domain containing protein; PAC repeat-containing protein; GAF domain protein; SPTR: C1YG24 PAS domain S-box; TIGRFAM: PAS sensor protein; PFAM: GAF domain; stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box
YP_003682068.1	COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR011991:IPR001367:IPR008988; KEGG: tfu:Tfu_0249 iron dependent repressor; PFAM: iron dependent repressor; SMART: iron dependent repressor; SPTR: C1YG23 Mn-dependent transcriptional regulator; PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain
YP_003682069.1	COGs: COG0259 pyridoxamine-phosphate oxidase; InterProIPR012349:IPR009002:IPR011576:IPR019576:IPR 000659:IPR019740; KEGG: tfu:Tfu_0248 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxine 5'-phosphate oxidase dimerisation-like; PRIAM: pyridoxal 5'-phosphate synthase; SPTR: C1YG22 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase; pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase
YP_003682070.1	KEGG: tcu:Tcur_4806 hypothetical protein; SPTR: C1YG21  uncharacterized protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003682071.1	KEGG: scl:sce_pseudo_02 pseudogene; SPTR: C1YG20  uncharacterized protein
YP_003682072.1	COGs: COG1932 phosphoserine aminotransferase; InterPro IPR015421:IPR015424:IPR000192:IPR006272; KEGG: tfu:Tfu_0246 phosphoserine aminotransferase; PFAM: aminotransferase class V; SPTR: C1YG19 phosphoserine aminotransferase; TIGRFAM: phosphoserine aminotransferase; PFAM: aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase, Methanosarcina type; phosphoserine aminotransferase
YP_003682073.1	COGs: COG0584 glycerophosphoryl diester phosphodiesterase; InterPro IPR017946:IPR004129; KEGG: tfu:Tfu_0245 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase; SPTR: C1YG18 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase family
YP_003682074.1	KEGG: tfu:Tfu_0244 hypothetical protein; SPTR: C1YG17  uncharacterized protein
YP_003682075.1	COGs: COG3246 conserved hypothetical protein; InterPro IPR008567; KEGG: msm:MSMEG_5614 hypothetical protein; PFAM: protein of unknown function DUF849; SPTR: C1YG16 Uncharacterized conserved protein; PFAM: Prokaryotic protein of unknown function (DUF849)
YP_003682076.1	SPTR: C1YG15  uncharacterized protein
YP_003682077.1	COGs: COG1514 2'-5' RNA ligase; InterPro IPR004175:IPR014051:IPR009097; KEGG: tfu:Tfu_0243 2',5' RNA ligase; PFAM: phosphoesterase HXTX; SPTR: C1YG14 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase
YP_003682078.1	InterPro IPR011701:IPR016196; KEGG: tfu:Tfu_0242  integral membrane efflux protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YG13 Arabinose efflux permease family protein; PFAM: Bacterial protein of unknown function (DUF894)
YP_003682079.1	COGs: COG2252 Permease; InterPro IPR006043; KEGG: tfu:Tfu_0240  xanthine/uracil permease; PFAM: xanthine/uracil/vitamin C permease; SPTR: C1YG12 Permease; PFAM: Permease family
YP_003682080.1	KEGG: tfu:Tfu_0239 hypothetical protein; SPTR: C1YG11  uncharacterized protein; PFAM: protein of unknown function (DUF2530)
YP_003682081.1	COGs: COG2890 methylase of polypeptide chain release factors; InterPro IPR007848:IPR002052; KEGG: tfu:Tfu_0238 hypothetical protein; PFAM: methyltransferase small; SPTR: C1YG10 methylase of polypeptide chain release factors; PFAM: methyltransferase small domain; TIGRFAM: HemK family  methylases
YP_003682082.1	COGs: COG3217 Uncharacterized Fe-S protein; InterPro IPR011037:IPR005302:IPR005303; KEGG: sen:SACE_0326 hypothetical protein; PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; SPTR: C1YG09 Uncharacterized Fe-S protein; PFAM: MOSC N-terminal beta barrel domain; MOSC domain
YP_003682083.1	InterPro IPR003594; KEGG: tfu:Tfu_0237 hypothetical protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YG08  uncharacterized protein
YP_003682084.1	KEGG: tfu:Tfu_0235 hypothetical protein; SPTR: C1YG07  uncharacterized protein; PFAM: protein of unknown function (DUF3027)
YP_003682085.1	COGs: COG1278 Cold shock protein; InterProIPR012340:IPR011129:IPR016027:IPR002059:IPR 019844; KEGG: tfu:Tfu_0234 cold-shock DNA-binding protein family protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: C1YG06 Cold-shock DNA-binding protein family; PFAM: 'Cold-shock' DNA-binding domain
YP_003682086.1	KEGG: eic:NT01EI_2381 ribonuclease, RNaseE/RNaseG family, SPTR: C1YG05  uncharacterized protein
YP_003682087.1	KEGG: tfu:Tfu_0232 hypothetical protein; SPTR: C1YG01  uncharacterized protein
YP_003682088.1	KEGG: Col7a1; procollagen, type VII, alpha 1; SPTR: C1YFZ9  uncharacterized protein
YP_003682089.1	COGs: COG1061 DNA or RNA helicase of superfamily II; InterProIPR014021:IPR001650:IPR014001:IPR006935:IPR 001161; KEGG: sro:Sros_8907 hypothetical protein; PFAM: helicase; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein; SPTR: C1YFW0 DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; type III restriction enzyme, res subunit
YP_003682090.1	KEGG: tfu:Tfu_0230 hypothetical protein; SPTR: C1YH21  uncharacterized protein
YP_003682091.1	COGs: COG0208 ribonucleotide reductase beta subunit; InterPro IPR012348:IPR009078; KEGG: sen:SACE_0591 ribonucleotide-diphosphate reductase subunit beta; SPTR: C1YH20 ribonucleotide reductase subunit beta; PFAM: ribonucleotide reductase, small chain
YP_003682092.1	InterPro IPR010488; KEGG: bvi:Bcep1808_7664 zeta toxin family protein; PFAM: Zeta toxin family protein; SPTR: C1YH19 Zeta toxin; PFAM: Zeta toxin
YP_003682093.1	COGs: COG5297 cellobiohydrolase A (1 4-beta-cellobiosidase A); InterProIPR016288:IPR012291:IPR001919:IPR008965:IPR 018366:IPR001524; KEGG: tfu:Tfu_1074 endoglucanase; PFAM: 1, 4-beta cellobiohydrolase; cellulose-binding family II; SMART: cellulose-binding family II; SPTR: C1YH18 cellobiohydrolase A (1,4-beta-cellobiosidase A); PFAM: cellulose binding domain; glycosyl hydrolases family 6
YP_003682094.1	InterPro IPR015797:IPR000086; KEGG: tfu:Tfu_0229  MutT family protein; PFAM: NUDIX hydrolase; SPTR: C1YH16 NUDIX family protein; PFAM: NUDIX domain
YP_003682095.1	COGs: COG1132 ABC-type multidrug transporter ATPase and permeases; InterProIPR003439:IPR017940:IPR011527:IPR001140:IPR 017871; KEGG: cai:Caci_5182 ABC transporter; PFAM: ABC transporter transmembrane protein; ABC transporter; SPTR: C1YH17 ABC-type multidrug transporter ATPase and permease; PFAM: ABC transporter transmembrane protein; ABC transporter
YP_003682096.1	COGs: COG1132 ABC-type multidrug transporter ATPase and permeases; InterProIPR017940:IPR003439:IPR003593:IPR011527:IPR 001140; KEGG: sro:Sros_8452 ABC-type multidrug transporter ATPase and permeases; PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; SPTR: C1YH15 ABC-type multidrug transporter ATPase and permease; PFAM: ABC transporter transmembrane protein; ABC transporter
YP_003682097.1	COGs: COG0459 chaperonin GroEL (HSP60 family); InterPro IPR001844:IPR002423:IPR018370; KEGG: tfu:Tfu_0228 chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; SPTR: C1YH13 60 kDa chaperonin; TIGRFAM: chaperonin GroEL; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL
YP_003682098.1	InterPro IPR000412:IPR013525; KEGG: xce:Xcel_3137 ABC-2 type transporter; PFAM: ABC transporter; SPTR: C1YH12 ABC-type multidrug transporter permease; PFAM: ABC transporter; TIGRFAM: ABC transporter efflux protein, DrrB family
YP_003682099.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR017871:IPR003593:IPR005894:IPR003439; KEGG: xce:Xcel_3136 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YH11 Daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase; PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit
YP_003682100.1	InterPro IPR005149:IPR011991; KEGG: sen:SACE_0798 transcriptional regulator; PFAM: transcriptional regulator PadR family protein; SPTR: C1YH10 Predicted transcriptional regulator; PFAM: transcriptional regulator PadR-like family
YP_003682101.1	InterPro IPR000182:IPR016181; KEGG: gvi:glr3411 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YH09 acetyltransferase, N-acetylglutamate synthase; PFAM: acetyltransferase (GNAT) family
YP_003682102.1	InterPro IPR012675:IPR016155:IPR003749; KEGG: tfu:Tfu_0227 hypothetical protein; PFAM: thiamineS protein; SPTR: C1YH08 Molybdopterin synthase subunit MoaD; PFAM: ThiS family
YP_003682103.1	COGs: COG0498 threonine synthase; InterPro IPR001926:IPR004450; KEGG: tfu:Tfu_0226 threonine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; SPTR: C1YH07 L-threonine synthase; TIGRFAM: threonine synthase; PFAM: pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase
YP_003682104.1	COGs: COG0380 Trehalose-6-phosphate synthase; InterPro IPR001830; KEGG: tfu:Tfu_0225 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: glycosyl transferase family 20; PRIAM: alpha,alpha-trehalose-phosphate synthase (UDP-forming); SPTR: C1YH06 Trehalose 6-phosphate synthase; PFAM: glycosyltransferase family 20
YP_003682105.1	COGs: COG2320 conserved hypothetical protein; InterPro IPR007344; KEGG: sen:SACE_3610 hypothetical protein; PFAM: protein of unknown function UPF0157; SPTR: C1YH05 Uncharacterized conserved protein; PFAM: Uncharacterised protein family (UPF0157)
YP_003682106.1	InterPro IPR013216; KEGG: bfa:Bfae_11980 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase type 11; SPTR: C1YH04 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain
YP_003682107.1	InterPro IPR000209; KEGG: tfu:Tfu_0221 subtilisin-like serine protease; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: C1YH03 Subtilase family protease; PFAM: Subtilase family
YP_003682108.1	KEGG: tfu:Tfu_0223 hypothetical protein; SPTR: C1YH02  uncharacterized protein; PFAM: protein of unknown function (DUF3263)
YP_003682109.1	COGs: COG1877 Trehalose-6-phosphatase; InterPro IPR006379:IPR003337; KEGG: tfu:Tfu_0224 trehalose-phosphatase; PFAM: trehalose-phosphatase; SPTR: C1YH01 Trehalose 6-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB
YP_003682110.1	COGs: COG1680 beta-lactamase class C and other penicillin binding protein; InterPro IPR012338:IPR001466; KEGG: tfu:Tfu_0220  secreted esterase; PFAM: beta-lactamase; SPTR: C1YH00 Penicillin-binding protein, beta-lactamase class C; PFAM: beta-lactamase
YP_003682111.1	COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); InterPro IPR002813:IPR016117; KEGG: svi:Svir_33310 N-acetylglutamate synthase/glutamate N-acetyltransferase; PFAM: arginine biosynthesis protein ArgJ; PRIAM: glutamate N-acetyltransferase; SPTR: C1YGZ9 glutamate N-acetyltransferase; N-acetylglutamate synthase; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase
YP_003682112.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002198:IPR002347; KEGG: sro:Sros_6803 hypothetical protein; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YGZ8  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003682113.1	COGs: COG2271 Sugar phosphate permease; InterPro IPR004638:IPR011701:IPR016196; KEGG: sco:SCO2373 tetracenomycin C efflux protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YGZ7 Drug resistance transporter EmrB/QacA subfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily
YP_003682114.1	COGs: COG1309 transcriptional regulator; InterPro IPR001647:IPR012287:IPR009057; KEGG: sco:SCO2374 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YGZ6 transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003682115.1	COGs: COG1670 acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182:IPR016181; KEGG: sma:SAV_2742 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YGZ5 acetyltransferase, ribosomal protein N-acetylase; PFAM: acetyltransferase (GNAT) family
YP_003682116.1	InterProIPR002048:IPR018248:IPR018247:IPR018249:IPR 011992; KEGG: hypothetical protein; PFAM: EF-Hand domain; SPTR: C1YGZ4  calcium-binding protein
YP_003682117.1	InterPro IPR000073:IPR013595; KEGG: cai:Caci_0472 alpha/beta hydrolase; PFAM: alpha/beta hydrolase fold; TAP domain protein; SPTR: C1YGZ3 alpha/beta hydrolase family protein; PFAM: alpha/beta hydrolase fold
YP_003682118.1	COGs: COG1080 phosphoenolpyruvate-protein kinase (PTS system EI component); InterProIPR000121:IPR006318:IPR008279:IPR008731:IPR 018274:IPR015813; KEGG: tfu:Tfu_2765 phosphoenolpyruvate--protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; SPTR: C1YGZ2 phosphoenolpyruvate--protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase
YP_003682119.1	COGs: COG1063 threonine dehydrogenase and related Zn-dependent dehydrogenase; InterProIPR013149:IPR016040:IPR011032:IPR002328:IPR 013154; KEGG: fre:Franean1_7070 alcohol dehydrogenase; PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; SPTR: C1YGZ1 Theronine dehydrogenase-like Zn-dependent dehydrogenase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003682120.1	COGs: COG4668 Mannitol/fructose-specific phosphotransferase system IIA domain; InterPro IPR002178:IPR016152; KEGG: fre:Franean1_7071 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: C1YGZ0 PTS system IIA component; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YP_003682121.1	COGs: COG2213 phosphotransferase system mannitol-specific IIBC component; InterPro IPR003501; KEGG: fre:Franean1_7072 phosphotransferase system lactose/cellobiose-specific IIsubunit beta; PFAM: phosphotransferase system lactose/cellobiose-specific IIsubunit beta; SPTR: C1YGY9 PTS system IIB component; PFAM: PTS system, Lactose/cellobiose specific IIsubunit beta
YP_003682122.1	COGs: COG2213 phosphotransferase system mannitol-specific IIBC component; InterPro IPR003352:IPR004718:IPR013014; KEGG: bha:BH3854 PTS system, mannitol-specific enzyme II, BC component; PFAM: phosphotransferase system EIIC; SPTR: C1YGY8 PTS system IIC component; TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphotransferase system, EIIC; TIGRFAM: PTS system, mannitol-specific IIC component
YP_003682123.1	COGs: COG1349 transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR014036; KEGG: fre:Franean1_7075 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: C1YGY7 DeoR family transcriptional regulator; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_003682124.1	COGs: COG1105 fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); InterPro IPR011611:IPR017583; KEGG: tfu:Tfu_0696  6-phosphofructokinase: 1-phosphofructokinase; PFAM: PfkB domain protein; PRIAM: 1-phosphofructokinase; SPTR: C1YGY6 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase
YP_003682125.1	COGs: COG1925 phosphotransferase system HPr-related protein; InterPro IPR000032:IPR005698:IPR001020; KEGG: pac:PPA0352 phosphocarrier protein HPr; PFAM: phosphoryl transfer system HPr; SPTR: C1YGY5 phosphotransferase system HPr (HPr) family protein; TIGRFAM: phosphocarrier, HPr family; PFAM: PTS HPr component phosphorylation site; TIGRFAM: phosphotransferase System HPr (HPr) Family
YP_003682126.1	COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR016040:IPR002198:IPR002347; KEGG: sco:SCO6829 oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YFZ8 Short-chain alcohol dehydrogenase; PFAM: short chain dehydrogenase
YP_003682127.1	COGs: COG0583 transcriptional regulator; InterPro IPR011991:IPR000847:IPR005119; KEGG: sen:SACE_5710  transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: C1YFZ7 LysR family transcriptional regulator; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_003682128.1	COGs: COG1295 membrane protein; InterPro IPR004664:IPR017039; KEGG: tfu:Tfu_0251 ribonuclease BN; PFAM: ribonuclease BN; SPTR: C1YFZ6 Predicted membrane protein, COG1295; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN)
YP_003682129.1	KEGG: tfu:Tfu_2991 hypothetical protein; SPTR: C1YFZ5  uncharacterized protein; PFAM: protein of unknown function (DUF3618)
YP_003682130.1	InterPro IPR009937; KEGG: tfu:Tfu_2992 hypothetical protein; PFAM: protein of unknown function DUF1469; SPTR: C1YFZ4  uncharacterized protein; PFAM: protein of unknown function (DUF1469)
YP_003682131.1	KEGG: tfu:Tfu_2993 hypothetical protein; SPTR: C1YFZ3  uncharacterized protein
YP_003682132.1	InterPro IPR016196:IPR011701; KEGG: sco:SCO1457 transport protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YFZ2 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003682133.1	COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136:IPR013785; KEGG: gyc:GYMC61_2684 2-nitropropane dioxygenase NPD; PFAM: 2-nitropropane dioxygenase NPD; SPTR: C1YFZ1 2-nitropropane dioxygenase-like enzyme; PFAM: 2-nitropropane dioxygenase
YP_003682134.1	KEGG: tfu:Tfu_0370 hypothetical protein; SPTR: C1YFZ0  uncharacterized protein; PFAM: Domain of Unknown Function (DUF1540)
YP_003682135.1	KEGG: cgt:cgR_2730 iron-enterobactin transporter periplasmic binding protein; SPTR: C1YFY9  uncharacterized protein
YP_003682136.1	KEGG: bcm:Bcenmc03_4453 hypothetical protein; SPTR: B1K9K3  uncharacterized protein
YP_003682137.1	COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525:IPR016059; KEGG: bln:Blon_0092 DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; SPTR: B6XXI6  uncharacterized protein; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm)
YP_003682138.1	InterPro IPR000305; KEGG: cmi:CMM_0575 hypothetical protein; PFAM: excinuclease ABC C subunit domain protein; SPTR: A5CNG3  uncharacterized protein; PFAM: GIY-YIG catalytic domain
YP_003682139.1	InterPro IPR007278; KEGG: fra:Francci3_2266 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YFY7  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003682140.1	InterPro IPR001387:IPR010982; KEGG: tcu:Tcur_2126 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YFY6 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003682141.1	InterPro IPR003594; KEGG: tcu:Tcur_3632 ATP-binding region ATPase domain protein; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YFY5 histidine kinase; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003682142.1	KEGG: scl:sce1666 cell division protein; SPTR: C1YFY4  uncharacterized protein
YP_003682143.1	COGs: COG2366 protein related to penicillin acylase; InterPro IPR014395:IPR002692; KEGG: tfu:Tfu_1644 penicillin amidase; PFAM: peptidase S45 penicillin amidase; SPTR: C1YFY3 Penicilin amidase; PFAM: Penicillin amidase
YP_003682144.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002198:IPR002347; KEGG: sen:SACE_2973 oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YFY2  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003682145.1	InterPro IPR001647:IPR012287:IPR011075:IPR009057; KEGG: sma:SAV_5084 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YFY1 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003682146.1	InterPro IPR014942; KEGG: stp:Strop_2895 ankyrin; PFAM: Domain of unknown function DUF1814; SPTR: C1YFY0  uncharacterized protein; PFAM: Domain of unknown function (DUF1814)
YP_003682147.1	KEGG: hypothetical protein; SPTR: C1YFX9  uncharacterized protein
YP_003682148.1	COGs: COG4585 Signal transduction histidine kinase; InterProIPR003594:IPR005467:IPR011712:IPR013838:IPR 006650; KEGG: sen:SACE_7062 two component system sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; SPTR: C1YFX8 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003682149.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR011991:IPR000792:IPR001789:IPR011006:IPR 016032; KEGG: sro:Sros_1910 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YFX7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003682150.1	InterPro IPR005065; KEGG: sma:SAV_819 lipase; PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; SPTR: C1YFX6 Platelet-activating factor acetylhydrolase, plasma/intracellular isoform II; PFAM: isoform II
YP_003682151.1	KEGG: sco:SCO3223 ABC transporter  transmembrane protein; SPTR: C1YFX5  uncharacterized protein
YP_003682152.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: sgr:SGR_3295  ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YFX4 ABC-type multidrug transporter ATPase component; PFAM: ABC transporter
YP_003682153.1	InterPro IPR015035; KEGG: ami:Amir_6489 domain of unknown function DUF1918; PFAM: Domain of unknown function DUF1918; SPTR: C1YFX3  uncharacterized protein; PFAM: Domain of unknown function (DUF1918)
YP_003682154.1	InterPro IPR017871; KEGG: sma:SAV_7434 hypothetical protein; SPTR: C1YFX2  uncharacterized protein; PFAM: Fibronectin-binding protein (FBP)
YP_003682155.1	COGs: COG1670 acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR016181:IPR000182; KEGG: fal:FRAAL5040  acetyltransferase protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YFX1 acetyltransferase, ribosomal protein N-acetylase; PFAM: acetyltransferase (GNAT) family
YP_003682156.1	KEGG: rhi:NGR_c09100  long-chain-fatty-acid--CoA ligase; SPTR: C1YFX0  uncharacterized protein
YP_003682157.1	COGs: COG2076 membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: sen:SACE_1465 small multidrug resistance efflux protein; PFAM: small multidrug resistance protein; SPTR: C1YFW9 Cation/cationic drug transporter; PFAM: Small Multidrug Resistance protein
YP_003682158.1	COGs: COG2076 membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: sen:SACE_1465 small multidrug resistance efflux protein; PFAM: small multidrug resistance protein; SPTR: C1YFW8 Cation/cationic drug transporter; PFAM: Small Multidrug Resistance protein
YP_003682159.1	COGs: COG3226 conserved hypothetical protein; InterPro IPR001647:IPR012287:IPR009057; KEGG: sen:SACE_1466 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YFW7 Uncharacterized conserved protein; PFAM: Bacterial regulatory proteins, tetR family
YP_003682160.1	COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR019952; KEGG: fal:FRAAL3435  monooxygenase; SPTR: C1YFW6  uncharacterized protein; TIGRFAM:  F420-dependent oxidoreductase; PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv1855c family
YP_003682161.1	KEGG: kra:Krad_0056 hypothetical protein; SPTR: C1YFW5  uncharacterized protein
YP_003682162.1	InterPro IPR005560; KEGG: tfu:Tfu_1443 hypothetical protein; PFAM: protein of unknown function DUF326; SPTR: C1YFW4  uncharacterized protein; PFAM: Domain of Unknown Function (DUF326)
YP_003682163.1	COGs: COG3544 conserved hypothetical protein; InterPro IPR005183; KEGG: sro:Sros_0057 hypothetical protein; PFAM: protein of unknown function DUF305; SPTR: C1YFW3 Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF305)
YP_003682164.1	KEGG: sro:Sros_0058 hypothetical protein; SPTR: C1YFW2  uncharacterized protein
YP_003682165.1	InterPro IPR019587; KEGG: sro:Sros_4153 hypothetical protein; PFAM: polyketide cyclase/dehydrase; SPTR: C1YFV8 polyketide cyclase / dehydrase family protein; PFAM: polyketide cyclase / dehydrase and lipid transport
YP_003682166.1	InterPro IPR006163:IPR009081:IPR006162; KEGG: sco:SCO5316 acyl carrier protein; PFAM: phosphopantetheine-binding; SPTR: C1YFV7 phosphopantetheine-containing protein; PFAM: phosphopantetheine attachment site
YP_003682167.1	COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR016039:IPR014031:IPR016038:IPR014030; KEGG: cai:Caci_1087 beta-ketoacyl synthase; PFAM: beta-ketoacyl synthase; SPTR: C1YFV6 3-oxoacyl-(acyl-carrier-protein) synthase; PFAM: beta-ketoacyl synthase, N-terminal domain; beta-ketoacyl synthase, C-terminal domain
YP_003682168.1	COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterProIPR014030:IPR014031:IPR016039:IPR018201:IPR 016038; KEGG: sma:SAV_2838 3-oxoacyl-ACP synthase I; PFAM: beta-ketoacyl synthase; SPTR: C1YFV5 3-oxoacyl-(acyl-carrier-protein) synthase II; PFAM: beta-ketoacyl synthase, N-terminal domain; beta-ketoacyl synthase, C-terminal domain
YP_003682169.1	SPTR: C1YFV4  uncharacterized protein
YP_003682170.1	InterPro IPR018532; KEGG: sco:SCP1.267  secreted protein; PFAM: Domain of unknown function DUF1994; SPTR: C1YFV3  uncharacterized protein; PFAM: Domain of unknown function (DUF1994)
YP_003682171.1	COGs: COG0609 ABC-type Fe3+-siderophore transporter permease; InterPro IPR000522; KEGG: ami:Amir_4784 transporter permease; PFAM: transporter permease; SPTR: C1YFV2 ABC-type Fe3+-siderophore transporter permease; PFAM: FecCD transport family
YP_003682172.1	COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; InterPro IPR017871:IPR003593:IPR003439; KEGG: ami:Amir_4783 ABC transporter related; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YGY4 ABC-type cobalamin/Fe3+-siderophore transporter ATPase component; PFAM: ABC transporter
YP_003682173.1	COGs: COG0614 ABC-type Fe3+-hydroxamate transporter periplasmic component; InterPro IPR002491; KEGG: ami:Amir_4782 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: C1YGY3 ABC-type Fe3+-hydroxamate transporter periplasmic component; PFAM: Periplasmic binding protein
YP_003682174.1	InterPro IPR008979:IPR000421:IPR018958; KEGG: sco:SCO7634 hypothetical protein; PFAM: cell wall assembly/cell proliferation coordinating protein, KNR4-like; coagulation factor 5/8 type domain protein; SMART: cell wall assembly/cell proliferation coordinating protein, KNR4-like; SPTR: C1YGY2  glucan synthasis protein; PFAM: F5/8 type C domain
YP_003682175.1	COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060:IPR018093; KEGG: svi:Svir_23270 choline/carnitine/betaine transport; PFAM: BCCT transporter; SPTR: C1YGY1 Choline/carnitine/betaine transport; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport
YP_003682176.1	COGs: COG3397 conserved hypothetical protein; InterPro IPR004302; KEGG: sco:SCO6345 secreted chitinase; PFAM: chitin-binding domain 3 protein; SPTR: C1YGY0 Uncharacterized conserved protein; PFAM: Chitin binding domain
YP_003682177.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR009061; KEGG: sgr:SGR_2440 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YGX9 Predicted transcriptional regulator; PFAM: MerR family regulatory protein
YP_003682178.1	COGs: COG0262 dihydrofolate reductase; InterPro IPR002734; KEGG: sro:Sros_3264 deaminase-reductase domain-containing protein; PFAM: bifunctional deaminase-reductase domain protein; SPTR: C1YGX8 dihydrofolate reductase; PFAM: RibD C-terminal domain
YP_003682179.1	InterProIPR001647:IPR003012:IPR004111:IPR011075:IPR 009057:IPR012287:IPR015893; KEGG: sro:Sros_1945  transcriptional regulator, TetR family; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; SPTR: C1YGX7 transcriptional regulator, tetR family; PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family
YP_003682180.1	InterPro IPR003675; KEGG: hma:rrnB0071 hypothetical protein; PFAM: hypothetical protein; SPTR: C1YGX6 CAAX amino terminal protease family; PFAM: CAAX amino terminal protease family
YP_003682181.1	COGs: COG1182 acyl carrier protein phosphodiesterase; InterPro IPR003680; KEGG: fal:FRAAL1130  acyl carrier protein phosphodiesterase (ACP phosphodiesterase); PFAM: NAD(P)H dehydrogenase (quinone); SPTR: C1YGX5 acyl carrier protein phosphodiesterase; PFAM: Flavodoxin-like fold
YP_003682182.1	InterPro IPR001647:IPR009057:IPR012287; KEGG: kra:Krad_1571 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YGX4 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003682183.1	InterPro IPR003675; KEGG: sen:SACE_3667 hypothetical protein; PFAM: hypothetical protein; SPTR: C1YGX3 CAAX amino terminal protease family; PFAM: CAAX amino terminal protease family
YP_003682184.1	COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155:IPR013785; KEGG: sma:SAV_4014 oxidoreductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase; SPTR: C1YGX2 NADH:flavin oxidoreductase; PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_003682185.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR009061; KEGG: sma:SAV_4015 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YGX1 Predicted transcriptional regulator; PFAM: MerR family regulatory protein
YP_003682186.1	COGs: COG0583 transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: spe:Spro_1349 LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: C1YGX0 LysR family transcriptional regulator; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_003682187.1	COGs: COG4125 membrane protein; InterPro IPR007896; KEGG: pfo:Pfl01_4339 transmembrane pair; PFAM: transmembrane pair domain protein; SPTR: C1YGW9 Predicted membrane protein, COG4125; PFAM: Bacterial transmembrane Pair family
YP_003682188.1	COGs: COG2311 membrane protein; InterPro IPR007349:IPR007299; KEGG: sro:Sros_8135 hypothetical protein; PFAM: protein of unknown function DUF418; protein of unknown function DUF405; SPTR: C1YGW8 Predicted membrane protein, COG2311; PFAM: protein of unknown function (DUF418)
YP_003682189.1	COGs: COG2188 transcriptional regulators; InterProIPR000524:IPR001647:IPR004111:IPR009057:IPR 011075:IPR011991:IPR012287; KEGG: sro:Sros_2497  transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; regulatory protein TetR; Tetracyclin repressor domain protein; SMART: regulatory protein GntR HTH; SPTR: C1YGW7 TetR family transcriptional regulator; PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, gntR family; Bacterial regulatory proteins, tetR family
YP_003682190.1	InterPro IPR003593; KEGG: tfu:Tfu_0965 hypothetical protein; SMART: ATPase AAA; SPTR: C1YGW6  uncharacterized protein; PFAM: Zeta toxin
YP_003682191.1	InterPro IPR004360; KEGG: sen:SACE_3338 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YGW5 Uncharacterized conserved protein; PFAM: glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003682192.1	KEGG: cai:Caci_8575 hypothetical protein; SPTR: C1YGW4  uncharacterized protein
YP_003682193.1	KEGG: tfu:Tfu_2838 hypothetical protein; SPTR: C1YGW3  uncharacterized protein
YP_003682194.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013149:IPR016040:IPR011032:IPR013154; KEGG: mjl:Mjls_1183 alcohol dehydrogenase; PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; SPTR: C1YGW2 Zn-dependent oxidoreductase, NADPH:quinone reductase; PFAM: alcohol dehydrogenase GroES-like domain
YP_003682195.1	COGs: COG3384 conserved hypothetical protein; InterPro IPR004183:IPR014436; KEGG: ami:Amir_2610 extradiol ring-cleavage dioxygenase class III protein subunit B; PFAM: extradiol ring-cleavage dioxygenase class III protein subunit B; SPTR: C1YGW1 Uncharacterized conserved protein; PFAM: Catalytic Ligsubunit beta of aromatic ring-opening dioxygenase
YP_003682196.1	InterPro IPR000835:IPR011991; KEGG: ami:Amir_2612 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YGW0 transcriptional regulator; PFAM: MarR family
YP_003682197.1	COGs: COG1063 threonine dehydrogenase and related Zn-dependent dehydrogenase; InterProIPR013149:IPR014184:IPR016040:IPR011032:IPR 002328:IPR013154; KEGG: aau:AAur_0480 glutathione-independent formaldehyde dehydrogenase; PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; SPTR: C1YGV9 Formaldehyde dehydrogenase, glutathione-independent; TIGRFAM: formaldehyde dehydrogenase, glutathione-independent; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: formaldehyde dehydrogenase, glutathione-independent
YP_003682198.1	COGs: COG0738 Fucose permease; InterPro IPR011701:IPR016196; KEGG: bfa:Bfae_31500 fucose permease; PFAM: major facilitator superfamily MFS_1; SPTR: C1YGV8 Fucose permease; PFAM: Major Facilitator Superfamily
YP_003682199.1	COGs: COG3226 conserved hypothetical protein; InterPro IPR001647:IPR012287:IPR009057; KEGG: sco:SCO4461 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YGV7 Uncharacterized conserved protein; PFAM: Bacterial regulatory proteins, tetR family
YP_003682200.1	KEGG: mgi:Mflv_5440 hypothetical protein; SPTR: C1YGV6  uncharacterized protein
YP_003682201.1	InterPro IPR003675; KEGG: tfu:Tfu_1444 hypothetical protein; PFAM: hypothetical protein; SPTR: C1YGV5 CAAX amino terminal protease family; PFAM: CAAX amino terminal protease family
YP_003682202.1	COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR009081:IPR000873:IPR006163:IPR001242:IPR 006162:IPR020845:IPR010071:IPR010060; KEGG: sgr:SGR_449  NRPS; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; SPTR: C1YGV4 Non-ribosomal peptide synthase/amino acid adenylation enzyme; TIGRFAM: amino acid adenylation protein; non-ribosomal peptide synthase; PFAM: phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720
YP_003682203.1	COGs: COG1680 beta-lactamase class C and other penicillin binding protein; InterPro IPR001466:IPR012338; KEGG: sro:Sros_3177 beta-lactamase class C and other penicillin binding protein-like protein; PFAM: beta-lactamase; SPTR: C1YGV3 Penicillin-binding protein, beta-lactamase class C; PFAM: beta-lactamase
YP_003682204.1	COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR020845:IPR009081:IPR001242:IPR000873:IPR 006162:IPR010071:IPR006163; KEGG: avn:Avin_25650 non-ribosomal peptide synthase:amino acid adenylation; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; SPTR: C1YGV2 amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation domain protein; PFAM: phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720
YP_003682205.1	COGs: COG3251 conserved hypothetical protein; InterPro IPR005153; KEGG: mgi:Mflv_2699 MbtH-like protein; PFAM: MbtH domain protein; SPTR: C1YGV1 Uncharacterized conserved protein; PFAM: MbtH-like protein
YP_003682206.1	COGs: COG3569 Topoisomerase IB; InterPro IPR001631:IPR011010:IPR014711; KEGG: mva:Mvan_4748 hypothetical protein; PRIAM: DNA topoisomerase; SPTR: C1YGV0 Topoisomerase IB; PFAM: Eukaryotic DNA topoisomerase I, catalytic core
YP_003682207.1	KEGG: tfu:Tfu_1754 hypothetical protein; SPTR: C1YGU9  uncharacterized protein
YP_003682208.1	COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537:IPR004441; KEGG: tfu:Tfu_0213 RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; SPTR: C1YGU8 rRNA methylase, , group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: SpoU rRNA methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, , group 3
YP_003682209.1	COGs: COG0215 Cysteinyl-tRNA synthetase; InterProIPR015803:IPR015273:IPR009080:IPR014729:IPR 002308; KEGG: tfu:Tfu_0212 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; PRIAM: Cysteine--tRNA ligase; SPTR: Q47TG4 Cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase
YP_003682210.1	KEGG: Hypothetical protein CBG04386; SPTR: C1YGU5  uncharacterized protein
YP_003682211.1	COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR016040:IPR002198:IPR002347; KEGG: kra:Krad_1945 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YGU4 Short-chain alcohol dehydrogenase; PFAM: short chain dehydrogenase
YP_003682212.1	InterPro IPR001387; KEGG: kra:Krad_1949 transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; SPTR: C1YGU3  uncharacterized protein; PFAM: Helix-turn-helix
YP_003682213.1	COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase; InterPro IPR003526:IPR020555; KEGG: tfu:Tfu_2906 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; PRIAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; SPTR: Q47KT3 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: YgbB family; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
YP_003682214.1	COGs: COG1329 transcriptional regulators similar to M. xanthus CarD; InterPro IPR003711; KEGG: tfu:Tfu_2907 CarD family transcriptional regulator; PFAM: transcription factor CarD; SPTR: Q47KT2 CarD family transcriptional regulator; PFAM: CarD-like/TRCF domain
YP_003682215.1	COGs: COG0704 phosphate uptake regulator; InterPro IPR008170; KEGG: tfu:Tfu_2908 phosphate uptake regulator, PhoU; PFAM: PhoU family protein; SPTR: C1YGU0 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transporter regulatory protein PhoU; PFAM: PhoU domain; TIGRFAM: phosphate transporter regulatory protein PhoU
YP_003682216.1	COGs: COG5002 Signal transduction histidine kinase; InterProIPR005467:IPR004358:IPR003661:IPR003594:IPR 009082; KEGG: tfu:Tfu_2909 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: C1YGT9 Sensor protein; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003682217.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006:IPR011991; KEGG: tfu:Tfu_2910 response regulator receiver; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C1YGT8 Two component transcriptional regulator; PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal
YP_003682218.1	COGs: COG1490 D-Tyr-tRNAtyr deacylase; InterPro IPR003732; KEGG: tfu:Tfu_2922 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: C1YGT7 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase
YP_003682219.1	KEGG: tfu:Tfu_2921 hypothetical protein; SPTR: C1YGT6  uncharacterized protein; PFAM: Predicted membrane protein (DUF2207)
YP_003682220.1	COGs: COG2321 metalloprotease; InterPro IPR007343; KEGG: tfu:Tfu_2920 hypothetical protein; PFAM: protein of unknown function zinc metallopeptidase SPTR: C1YGT5 Predicted metalloprotease; PFAM:  neutral zinc metallopeptidase
YP_003682221.1	COGs: COG2321 metalloprotease; InterPro IPR007343; KEGG: tfu:Tfu_2919 metalloprotease; PFAM: protein of unknown function zinc metallopeptidase SPTR: C1YGT4 Predicted metalloprotease; PFAM:  neutral zinc metallopeptidase
YP_003682222.1	COGs: COG4188 dienelactone hydrolase; InterPro IPR006093; KEGG: saq:Sare_3190 hypothetical protein; SPTR: C1YGT3  uncharacterized protein; PFAM: chlorophyllase
YP_003682223.1	InterPro IPR001647:IPR012287:IPR011075:IPR009057; KEGG: stp:Strop_2944 regulatory protein, TetR; PFAM: regulatory protein TetR; SPTR: C1YGT2 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003682224.1	KEGG: sco:SCO1025 integral membrane protein; SPTR: C1YGT1  uncharacterized protein
YP_003682225.1	InterPro IPR019662; KEGG: tfu:Tfu_2918 hypothetical protein; PFAM: protein of unknown function DUF2516; SPTR: C1YGT0  uncharacterized protein; PFAM: protein of unknown function (DUF2516)
YP_003682226.1	InterPro IPR001915; KEGG: tfu:Tfu_2917 integral membrane protein; PFAM: peptidase M48 Ste24p; SPTR: C1YGS9 Zn-dependent protease with chaperone function; PFAM: peptidase family M48
YP_003682227.1	COGs: COG3682 transcriptional regulator protein; InterPro IPR005650:IPR011991; KEGG: tfu:Tfu_2916 transcriptional regulator; PFAM: Penicillinase repressor; SPTR: C1YGS8 Predicted transcriptional regulator, COG3682; PFAM: Penicillinase repressor
YP_003682228.1	COGs: COG0415 deoxyribodipyrimidine photolyase; InterProIPR002081:IPR006050:IPR005101:IPR018394:IPR 014729; KEGG: sro:Sros_1613 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; PRIAM: deoxyribodipyrimidine photo-lyase; SPTR: C1YGS7 deoxyribodipyrimidine photo-lyase type I; PFAM: FAD binding domain of DNA photolyase; DNA photolyase
YP_003682229.1	COGs: COG3272 conserved hypothetical protein; InterPro IPR017087:IPR007553:IPR013560; KEGG: sro:Sros_1610 protein of unknown function DUF1722; PFAM: protein of unknown function DUF523; protein of unknown function DUF1722; SPTR: C1YGS6 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF523); protein of unknown function (DUF1722)
YP_003682230.1	COGs: COG0627 esterase; InterPro IPR000801; KEGG: cai:Caci_0079  esterase; PFAM:  esterase; SPTR: C1YGS5 Predicted esterase; PFAM:  esterase
YP_003682231.1	COGs: COG0438 glycosyltransferase; InterPro IPR001296:IPR017814; KEGG: tfu:Tfu_2913  glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: C1YGS4 UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine; PFAM: glycosyl transferases group 1; TIGRFAM: UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase
YP_003682232.1	InterPro IPR019706; KEGG: tfu:Tfu_2912 hypothetical protein; PFAM: protein of unknown function DUF2596; SPTR: C1YGS3  uncharacterized protein; PFAM: protein of unknown function (DUF2596)
YP_003682233.1	COGs: COG0588 phosphoglycerate mutase 1; InterPro IPR013078:IPR001345:IPR005952; KEGG: sro:Sros_0958 bisphosphoglycerate mutase; PFAM: phosphoglycerate mutase; PRIAM: Bisphosphoglycerate mutase; SMART: phosphoglycerate mutase; SPTR: C1YGS2 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: phosphoglycerate mutase family; TIGRFAM: phosphoglycerate mutase, BPG-dependent, family 1
YP_003682234.1	COGs: COG2044 peroxiredoxins; KEGG: sro:Sros_0915 hypothetical protein; SPTR: C1YGS1 Predicted peroxiredoxin; PFAM: DsrE/DsrF-like family
YP_003682235.1	KEGG: tfu:Tfu_2871 hypothetical protein; SPTR: C1YGS0  uncharacterized protein; PFAM: E3 Ubiquitin ligase
YP_003682236.1	InterPro IPR014878; KEGG: tfu:Tfu_2872 hypothetical protein; PFAM: Domain of unknown function DUF1794; SPTR: C1YGR9  uncharacterized protein; PFAM: Domain of unknown function (DUF1794)
YP_003682237.1	COGs: COG0354 aminomethyltransferase related to GcvT; InterPro IPR013977:IPR017703:IPR006222; KEGG: tfu:Tfu_2873 hypothetical protein; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel; SPTR: C1YGR8 Folate-binding protein YgfZ; TIGRFAM: folate-binding protein YgfZ; PFAM: aminomethyltransferase folate-binding domain; glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: folate-binding protein YgfZ
YP_003682238.1	KEGG: kse:Ksed_06230 hypothetical protein; SPTR: C1YGR7  uncharacterized protein; PFAM: Telomeric repeat-binding factor 2
YP_003682239.1	COGs: COG4683 conserved hypothetical protein; InterPro IPR018670; KEGG: sro:Sros_7018 hypothetical protein; PFAM: protein of unknown function DUF2137; SPTR: C4EK31 Uncharacterized conserved protein; PFAM: Phage derived protein Gp49-like (DUF891)
YP_003682240.1	InterPro IPR000943:IPR001387:IPR010982; KEGG: sro:Sros_7019  XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YGR5 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003682241.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterProIPR013154:IPR013149:IPR011032:IPR016040:IPR 002345; KEGG: svi:Svir_30440 Zn-dependent oxidoreductase, NADPH:quinone reductase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; SPTR: C1YGR4 Zn-dependent oxidoreductase, NADPH:quinone reductase; PFAM: alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003682242.1	COGs: COG3442 glutamine amidotransferase; InterPro IPR017929:IPR011698; KEGG: tfu:Tfu_2713 hypothetical protein; PFAM: CobB/CobQ domain protein glutamine amidotransferase; SPTR: C1YGR3 Predicted glutamine amidotransferase; PFAM: CobB/CobQ-like glutamine amidotransferase domain
YP_003682243.1	COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterPro IPR013221:IPR013564:IPR018527; KEGG: tfu:Tfu_2714  ligase; PFAM: domain of unknown function DUF1727; Mur ligase middle domain protein; SPTR: C1YGR2 UDP-N-acetylmuramyl tripeptide synthase; PFAM: Domain of unknown function (DUF1727); Mur ligase middle domain
YP_003682244.1	KEGG: tfu:Tfu_2715 hypothetical protein; SPTR: C1YGR1  uncharacterized protein
YP_003682245.1	InterPro IPR010814:IPR013784; KEGG: tfu:Tfu_2718 hypothetical protein; PFAM: protein of unknown function DUF1416; SPTR: C1YGR0  uncharacterized protein; PFAM: protein of unknown function (DUF1416)
YP_003682246.1	COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763:IPR001307; KEGG: tcu:Tcur_0602 thiosulfate sulfurtransferase; PFAM: rhodanese; PRIAM: thiosulfate sulfurtransferase; SMART: rhodanese; SPTR: C1YGQ9 Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain
YP_003682247.1	InterPro IPR012336:IPR013766:IPR012335; KEGG: tcu:Tcur_0600 hypothetical protein; PFAM: thioredoxin domain; SPTR: C1YGQ8 thiol-disulfide isomerase-like thioredoxin; PFAM: thioredoxin
YP_003682248.1	KEGG: tfu:Tfu_2720 hypothetical protein; SPTR: C1YGQ7  uncharacterized protein
YP_003682249.1	InterPro IPR011008; KEGG: tfu:Tfu_2721 hypothetical protein; SPTR: C1YGQ6  uncharacterized protein
YP_003682250.1	COGs: COG0560 phosphoserine phosphatase; InterPro IPR005834:IPR006383:IPR006385; KEGG: tfu:Tfu_2722 HAD family hydrolase; PFAM: haloacid dehalogenase; SPTR: C1YGQ5 HAD-superfamily subfamily IB hydrolase, TIGR01490; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
YP_003682251.1	COGs: COG0451 nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509:IPR001127; KEGG: tfu:Tfu_2723  epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YGQ4 NAD dependent epimerase/dehydratase family protein; PFAM: NAD dependent epimerase/dehydratase family
YP_003682252.1	InterPro IPR013177; KEGG: ace:Acel_0243 hypothetical protein; PFAM: protein of unknown function DUF1713; SPTR: C1YGQ3  uncharacterized protein; PFAM: Mitochondrial domain of unknown function (DUF1713)
YP_003682253.1	COGs: COG0406 fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: tfu:Tfu_2725  phosphoglycerate mutase; PFAM: phosphoglycerate mutase; SMART: phosphoglycerate mutase; SPTR: C1YGQ2 fructose-2,6-bisphosphatase; PFAM: phosphoglycerate mutase family
YP_003682254.1	COGs: COG0001 glutamate-1-semialdehyde aminotransferase; InterPro IPR005814:IPR015424:IPR015421:IPR004639; KEGG: tfu:Tfu_2726 glutamate-1-semialdehyde aminotransferase; PFAM: aminotransferase class-III; SPTR: C1YGQ1 glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase
YP_003682255.1	KEGG: cms:CMS_2656 hypothetical protein; SPTR: C1YGQ0  uncharacterized protein
YP_003682256.1	KEGG: tfu:Tfu_0050 hypothetical protein; SPTR: C1YGP9  uncharacterized protein
YP_003682257.1	InterPro IPR000326:IPR016118; KEGG: sro:Sros_2444 hypothetical protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; SPTR: C1YGP8 PAP2 superfamily protein; PFAM: PAP2 superfamily
YP_003682258.1	COGs: COG0684 Demethylmenaquinone methyltransferase; InterPro IPR005493:IPR010203; KEGG: sro:Sros_8444 regulator of ribonuclease activity A; PFAM: dimethylmenaquinone methyltransferase; SPTR: C1YGP7 RraA family protein; TIGRFAM: regulator of ribonuclease activity A; PFAM: Demethylmenaquinone methyltransferase; TIGRFAM: RraA famliy
YP_003682259.1	KEGG: gym:GYMC10_4762 protein of unknown function DUF1648; SPTR: C1YGP6  uncharacterized protein
YP_003682260.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594; KEGG: rxy:Rxyl_1551 periplasmic sensor signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C1YGP5 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase
YP_003682261.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR000792:IPR001789:IPR011991:IPR011006:IPR 016032; KEGG: rxy:Rxyl_1550 LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YGP4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003682262.1	COGs: COG0024 methionine aminopeptidase; InterPro IPR000994:IPR001714:IPR002467; KEGG: fre:Franean1_1430 methionine aminopeptidase, type I; PFAM: peptidase M24; PRIAM: Methionyl aminopeptidase; SPTR: C1YGP3 methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_003682263.1	InterPro IPR015330; KEGG: tfu:Tfu_2729 hypothetical protein; PFAM: Bifunctional DNA primase/polymerase; SPTR: C1YGP2 Bifunctional DNA primase/polymerase famiily protein; PFAM: Bifunctional DNA primase/polymerase, N-terminal
YP_003682264.1	COGs: COG0113 delta-aminolevulinic acid dehydratase; InterPro IPR001731:IPR013785; KEGG: tfu:Tfu_2730 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; PRIAM: porphobilinogen synthase; SPTR: C1YGP1 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase
YP_003682265.1	COGs: COG1587 uroporphyrinogen-III synthase; InterProIPR000878:IPR003754:IPR003043:IPR014777:IPR 014776; KEGG: tfu:Tfu_2731 uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrinogen III synthase HEM4; SPTR: C1YGP0 uroporphyrinogen-III synthase; uroporphyrinogen-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) methylases; uroporphyrinogen-III synthase HemD
YP_003682266.1	COGs: COG0181 porphobilinogen deaminase; InterPro IPR000860; KEGG: tfu:Tfu_2732 porphobilinogen deaminase; PFAM: porphobilinogen deaminase; PRIAM: hydroxymethylbilane synthase; SPTR: C1YGN9 hydroxymethylbilane synthase; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase, C-terminal domain; porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase
YP_003682267.1	COGs: COG0373 glutamyl-tRNA reductase; InterProIPR015895:IPR006151:IPR015896:IPR000343:IPR 016040:IPR018214; KEGG: tfu:Tfu_2733 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; shikimate/quinate 5-dehydrogenase; PRIAM: glutamyl-tRNA reductase; SPTR: C1YGN8 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: glutamyl-tRNAGlu reductase, N-terminal domain; shikimate / quinate 5-dehydrogenase; glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase
YP_003682268.1	COGs: COG2344 AT-rich DNA-binding protein; InterPro IPR009718:IPR003781:IPR016040:IPR011991; KEGG: tfu:Tfu_2734 redox-sensing transcriptional repressor REX; PFAM: CoA-binding protein; Rex DNA-binding domain protein; SPTR: C1YGN7 AT-rich DNA-binding protein; PFAM: CoA binding domain; DNA-binding protein N-terminus
YP_003682269.1	InterPro IPR012336:IPR008554:IPR012335; KEGG: tfu:Tfu_2735  redoxin; PFAM: glutaredoxin 2; SPTR: C1YGN6 glutaredoxin-like domain (DUF836); PFAM: glutaredoxin-like domain (DUF836)
YP_003682270.1	InterPro IPR012675:IPR016155:IPR003749; KEGG: sma:SAV_4040 molybdopterin converting factor; PFAM: thiamineS protein; SPTR: C1YGN5 ThiS family protein; PFAM: ThiS family
YP_003682271.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001867:IPR016032:IPR011991; KEGG: tfu:Tfu_2737 transcriptional regulatory protein; PFAM: transcriptional regulator; SMART: transcriptional regulator domain protein; SPTR: C1YGN4 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: transcriptional regulatory protein, C terminal
YP_003682272.1	KEGG: tfu:Tfu_2738 hypothetical protein; SPTR: C1YGN3  uncharacterized protein
YP_003682273.1	InterPro IPR000182:IPR016181:IPR017813; KEGG: tfu:Tfu_2739  acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YGN2 Mycothiol biosynthesis acetyltransferase; TIGRFAM: mycothiol biosynthesis acetyltransferase; PFAM: acetyltransferase (GNAT) family; TIGRFAM: mycothiol biosynthesis acetyltransferase
YP_003682274.1	COGs: COG0573 ABC-type phosphate transporter permease; InterPro IPR011864:IPR000515; KEGG: tfu:Tfu_2741 phosphate ABC transporter permease PstC; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YGN1 phosphate ABC transporter membrane protein; TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: Binding-protein-dependent transporter inner membrane component; TIGRFAM: phosphate ABC transporter permease PstC
YP_003682275.1	COGs: COG0581 ABC-type phosphate transporter permease; InterPro IPR005672:IPR000515; KEGG: tfu:Tfu_2742 phosphate ABC transporter permease; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YGN0 phosphate ABC transporter membrane protein; TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: Binding-protein-dependent transporter inner membrane component; TIGRFAM: phosphate ABC transporter permease PstA
YP_003682276.1	COGs: COG1117 ABC-type phosphate transporter ATPase component; InterProIPR003439:IPR015850:IPR003593:IPR017871:IPR 005670; KEGG: tfu:Tfu_2743 phosphate ABC transporter permease; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YGM9 phosphate ABC transporter ATP-binding protein; TIGRFAM: phosphate ABC transporter ATPase; PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter ATP-binding protein
YP_003682277.1	COGs: COG1957 inosine-uridine nucleoside N-ribohydrolase; InterPro IPR001910; KEGG: nca:Noca_0542 inosine/uridine-preferring nucleoside hydrolase; PFAM: inosine/uridine-preferring nucleoside hydrolase; SPTR: C1YGM8 inosine-uridine nucleoside N-ribohydrolase; PFAM: inosine-uridine preferring nucleoside hydrolase
YP_003682278.1	InterPro IPR018670; KEGG: sro:Sros_0888 hypothetical protein; PFAM: protein of unknown function DUF2137; SPTR: C1YGM7 Uncharacterized conserved protein (DUF2137); PFAM: Phage derived protein Gp49-like (DUF891)
YP_003682279.1	InterPro IPR001387:IPR010982; KEGG: cai:Caci_7086 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YGM6 Predicted transcriptional regulator with C-terminal CBS domains; PFAM: Helix-turn-helix
YP_003682280.1	COGs: COG1392 phosphate transport regulator (distant homolog of PhoU); InterPro IPR018445; KEGG: tfu:Tfu_2745 hypothetical protein; PFAM: phosphate transport regulator; SPTR: C1YGM5 phosphate transport regulator related to PhoU; PFAM: protein of unknown function DUF47; TIGRFAM: conserved hypothetical protein TIGR00153
YP_003682281.1	KEGG: tfu:Tfu_2746 hypothetical protein; SPTR: C1YGM4  uncharacterized protein
YP_003682282.1	COGs: COG0034 glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR017932:IPR000583:IPR000836:IPR005854; KEGG: tfu:Tfu_2747 amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; SPTR: C1YGM3 Amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: phosphoribosyl transferase domain; glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase
YP_003682283.1	COGs: COG0150 phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR000728:IPR010918:IPR016188:IPR004733; KEGG: tfu:Tfu_2748 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; PRIAM: phosphoribosylformylglycinamidine cyclo-ligase; SPTR: C1YGM2 phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase
YP_003682284.1	KEGG: tfu:Tfu_2749 hypothetical protein; SPTR: C1YGM1  uncharacterized protein; PFAM: protein of unknown function (DUF3073)
YP_003682285.1	KEGG: sro:Sros_8996 hypothetical protein; SPTR: C1YGM0  uncharacterized protein
YP_003682286.1	InterPro IPR000551:IPR009061:IPR010093; KEGG: tfu:Tfu_2751 excisionase/Xis, DNA-binding; PFAM: regulatory protein MerR; SPTR: C1YGL9 DNA-binding protein, excisionase family; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: MerR family regulatory protein; TIGRFAM: DNA binding domain, excisionase family
YP_003682287.1	KEGG: bfa:Bfae_27470 hypothetical protein; SPTR: C1YGL8  uncharacterized protein
YP_003682288.1	InterPro IPR017909:IPR019948:IPR019931; KEGG: hsl:OE3741R hypothetical protein; PFAM: Gram-positive anchor; SPTR: C1YGL7  uncharacterized protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; TIGRFAM: LPXTG-motif cell wall anchor domain
YP_003682289.1	COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: tfu:Tfu_2753 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; SPTR: C1YGH3 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase
YP_003682290.1	KEGG: tcu:Tcur_1864 hypothetical protein; SPTR: C1YGH2  uncharacterized protein; TIGRFAM: DivIVA domain
YP_003682291.1	InterPro IPR007793:IPR019933; KEGG: tfu:Tfu_2754 hypothetical protein; PFAM: DivIVA family protein; SPTR: C1YGH1  uncharacterized protein; TIGRFAM: DivIVA domain; PFAM: DivIVA protein; TIGRFAM: DivIVA domain
YP_003682292.1	InterPro IPR001915; KEGG: tfu:Tfu_2436 hypothetical protein; PFAM: peptidase M48 Ste24p; SPTR: C1YGH0 Zn-dependent protease with chaperone function; PFAM: peptidase family M48
YP_003682293.1	KEGG: tfu:Tfu_2756 hypothetical protein; SPTR: C1YGG9  uncharacterized protein
YP_003682294.1	KEGG: art:Arth_3533 hypothetical protein; SPTR: C1YGG8  uncharacterized protein
YP_003682295.1	COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638:IPR018313; KEGG: tcu:Tcur_0186 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: C1YGG7 amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_003682296.1	KEGG: tcu:Tcur_0185 hypothetical protein; SPTR: C1YGG6  uncharacterized protein
YP_003682297.1	InterPro IPR000253:IPR008984; KEGG: tcu:Tcur_0184 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: C1YGG5 FHA domain-containing protein; PFAM: FHA domain
YP_003682298.1	InterPro IPR002035; KEGG: tcu:Tcur_0183 von Willebrand factor type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: C1YGG4 von Willebrand factor type A-like protein; PFAM: von Willebrand factor type A domain
YP_003682299.1	COGs: COG0631 serine/threonine protein phosphatase; InterPro IPR014045:IPR001932; KEGG: tcu:Tcur_0182 protein serine/threonine phosphatase; PFAM: protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; SPTR: C1YGG2  uncharacterized protein
YP_003682300.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR011990:IPR011717:IPR011009:IPR017442:IPR 013026:IPR000719; KEGG: tcu:Tcur_0181 serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; hypothetical protein; SPTR: C1YGG1 serine/threonine protein kinase; PFAM: protein kinase domain
YP_003682301.1	KEGG: tcu:Tcur_0180 hypothetical protein; SPTR: C1YGG0  uncharacterized protein
YP_003682302.1	COGs: COG3911 ATPase; KEGG: sen:SACE_3316 ATPase-like protein; SPTR: C1YGF9 Predicted ATPase, COG3911
YP_003682303.1	COGs: COG1819 glycosyl transferase related to UDP-glucuronosyltransferase; InterPro IPR004276:IPR002213:IPR006326; KEGG: sro:Sros_8226 hypothetical protein; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl transferase family 28; SPTR: C1YGF8 glycosyltransferase, MGT family; TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucoronosyl and UDP-glucosyl transferase; TIGRFAM: glycosyltransferase, MGT family
YP_003682304.1	COGs: COG3247 conserved hypothetical protein; InterPro IPR005325; KEGG: ttr:Tter_0213 hypothetical protein; SPTR: C1YGF7 Uncharacterized conserved protein
YP_003682305.1	COGs: COG0372 citrate synthase; InterProIPR016141:IPR002020:IPR016142:IPR010953:IPR 019810; KEGG: rop:ROP_50580 citrate synthase; PFAM: citrate synthase; SPTR: C1YGF6 citrate synthase; TIGRFAM: citrate synthase; PFAM: citrate synthase; TIGRFAM: citrate synthase (hexameric type)
YP_003682306.1	COGs: COG4108 peptide chain release factor RF-3; InterProIPR005225:IPR009000:IPR000795:IPR004548:IPR 009022; KEGG: tfu:Tfu_0359 peptide chain release factor 3; PFAM: protein synthesis factor GTP-binding; SPTR: C1YGF5 Bacterial peptide chain release factor 3 (BRF-3); TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3
YP_003682307.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: tfu:Tfu_1646 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YGF4 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003682308.1	COGs: COG1960 acyl-CoA dehydrogenase; InterProIPR013786:IPR006091:IPR006089:IPR006090:IPR 009100:IPR006092:IPR009075:IPR013764; KEGG: tfu:Tfu_1647 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: C1YGF3 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain
YP_003682309.1	InterPro IPR001509:IPR016040; KEGG: sgr:SGR_3038 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YGF2  uncharacterized protein; PFAM: RmlD substrate binding domain
YP_003682310.1	KEGG: sro:Sros_8797 hypothetical protein; SPTR: C1YGF1  uncharacterized protein
YP_003682311.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594; KEGG: sro:Sros_8798 signal transduction histidine kinase-like protein; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C1YGF0 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase
YP_003682312.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR000792:IPR001789:IPR011006:IPR016032:IPR 011991; KEGG: sro:Sros_8799 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YGE9 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003682313.1	COGs: COG2066 glutaminase; InterPro IPR015868:IPR012338; KEGG: sen:SACE_1670 glutaminase; PFAM: glutaminase, core; PRIAM: glutaminase; SPTR: C1YGE8 L-glutaminase; PFAM: glutaminase
YP_003682314.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR008271:IPR011009:IPR017442:IPR000719:IPR 017441; KEGG: tfu:Tfu_2845 tyrosine protein kinase:serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SPTR: C1YGE7 serine/threonine protein kinase; PFAM: protein kinase domain
YP_003682315.1	COGs: COG2124 cytochrome P450; InterPro IPR002397:IPR001128:IPR017972; KEGG: sgr:SGR_3494  cytochrome P450; SPTR: C1YGE6 cytochrome P450
YP_003682316.1	COGs: COG2217 Cation transport ATPase; InterProIPR006403:IPR017969:IPR000150:IPR001757:IPR 001756:IPR018303:IPR005834:IPR006121:IPR008250:IPR006416; KEGG: tfu:Tfu_2848 ATPase, E1-E2 type:copper-translocating P-type ATPase:heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; haloacid dehalogenase; Heavy metal transport/detoxification protein; SPTR: C1YGE5 Copper/silver-translocating P-type ATPase; TIGRFAM: copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; ATPase P; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_003682317.1	InterPro IPR006121:IPR000428:IPR017969; KEGG: tcu:Tcur_0091 heavy metal transport/detoxification protein; PFAM: Heavy metal transport/detoxification protein; SPTR: C1YGE4 Copper chaperone; PFAM: Heavy-metal-associated domain
YP_003682318.1	InterPro IPR000182:IPR016181; KEGG: acp:A2cp1_2670 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YGE3 acetyltransferase (GNAT) family protein; PFAM: acetyltransferase (GNAT) family
YP_003682319.1	COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: svi:Svir_21700 amino acid carrier protein; PFAM: sodium:alanine symporter; SPTR: C1YGE2 amino acid carrier protein; TIGRFAM: amino acid carrier protein; PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein
YP_003682320.1	COGs: COG2388 acetyltransferase; InterPro IPR000182:IPR016181; KEGG: tfu:Tfu_1960 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YGE1 Predicted acetyltransferase, COG2388; PFAM: acetyltransferase (GNAT) family
YP_003682321.1	COGs: COG2181 nitrate reductase subunit gamma; InterPro IPR003816; KEGG: gbr:Gbro_3702 respiratory nitrate reductase, gamma subunit; PFAM: nitrate reductase subunit gamma; PRIAM: nitrate reductase; SPTR: C1YGE0 Respiratory nitrate reductase, subunit gamma; TIGRFAM: respiratory nitrate reductase, subunit gamma; PFAM: nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, subunit gamma
YP_003682322.1	COGs: COG2180 nitrate reductase subunit delta; InterPro IPR003765; KEGG: sro:Sros_5443 respiratory nitrate reductase, delta subunit; PFAM: nitrate reductase subunit delta; SPTR: C1YGD9 nitrate reductase molybdenum cofactor assembly chaperone; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: nitrate reductase subunit delta; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone
YP_003682323.1	COGs: COG1140 nitrate reductase subunit beta; InterPro IPR006547:IPR017896; KEGG: sro:Sros_1923 nitrate reductase (beta subunit); SPTR: C1YGD8 Respiratory nitrate reductase subunit beta; TIGRFAM: nitrate reductase subunit beta; TIGRFAM: nitrate reductase subunit beta
YP_003682324.1	COGs: COG5013 nitrate reductase alpha subunit; InterProIPR006655:IPR006468:IPR009010:IPR006657:IPR 006656; KEGG: sro:Sros_5441 nitrate reductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; PRIAM: nitrate reductase; SPTR: C1YGD7 Respiratory nitrate reductase subunit alpha apoprotein; TIGRFAM: nitrate reductase, subunit alpha; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, subunit alpha
YP_003682325.1	COGs: COG2223 nitrate/nitrite transporter; InterPro IPR011701:IPR016196; KEGG: sro:Sros_1925 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YGD6 nitrate/nitrite transporter; PFAM: Major Facilitator Superfamily
YP_003682326.1	KEGG: sro:Sros_4106 hypothetical protein; SPTR: C1YGD5  uncharacterized protein; PFAM: RRNA methyltransferase AviRa
YP_003682327.1	COGs: COG1188 ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); InterPro IPR002942; KEGG: tfu:Tfu_1642 RNA-binding S4; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: C1YGD4 heat shock protein Hsp15; PFAM: S4 domain
YP_003682328.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: rha:RHA1_ro03350 hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YGD3 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003682329.1	KEGG: ach:Achl_2455 extracellular solute-binding protein family 5; SPTR: C1YGD2  uncharacterized protein
YP_003682330.1	InterPro IPR001054; KEGG: mms:mma_1001 hypothetical protein; SPTR: Q8GAB9  uncharacterized protein
YP_003682331.1	KEGG: cte:CT1601 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; SPTR: C1YGD1  uncharacterized protein
YP_003682332.1	COGs: COG0152 phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; InterPro IPR013816:IPR018236:IPR001636; KEGG: stp:Strop_3726 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: C1YGD0 phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_003682333.1	COGs: COG2188 transcriptional regulators; InterPro IPR000524:IPR011663:IPR011991; KEGG: fal:FRAAL1728 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C1YGC9 transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_003682334.1	KEGG: dma:DMR_02570 hypothetical protein; SPTR: C1YGC8  uncharacterized protein
YP_003682335.1	KEGG: nml:Namu_0923 hypothetical protein; SPTR: C1YGC7  uncharacterized protein
YP_003682336.1	SPTR: C1YGC6  uncharacterized protein
YP_003682337.1	KEGG: sro:Sros_9420 hypothetical protein; SPTR: C1YGC5  uncharacterized protein
YP_003682338.1	KEGG: sco:SCO1554 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; SPTR: C1YGC4  uncharacterized protein
YP_003682339.1	KEGG: pfo:Pfl01_1142 phage tail protein I; SPTR: C1YGC3  uncharacterized protein
YP_003682340.1	KEGG: Pc12g01000; SPTR: C1YGC2  uncharacterized protein
YP_003682341.1	KEGG: GI17500 gene product from transcript GI17500-RA ; K10742 DNA replication ATP-dependent helicase Dna2; SPTR: C1YGC1  uncharacterized protein
YP_003682342.1	KEGG: sma:SAV_3716 sporulation-related protein; SPTR: C1YGC0  uncharacterized protein
YP_003682343.1	KEGG: sco:SCO4620 sporulation-related protein; SPTR: C1YGB9  uncharacterized protein
YP_003682344.1	KEGG: mva:Mvan_2514 hypothetical protein; SPTR: C1YGB8  uncharacterized protein
YP_003682345.1	COGs: COG0270 Site-specific DNA methylase; KEGG: sen:SACE_7029 hypothetical protein; SPTR: C1YGB7  uncharacterized protein
YP_003682346.1	KEGG: YALI0C23452p; SPTR: C1YGB6  uncharacterized protein
YP_003682347.1	COGs: COG1484 DNA replication protein; InterPro IPR002611; KEGG: rxy:Rxyl_0041 hypothetical protein; PFAM: IstB domain protein ATP-binding protein; SPTR: C1YGB5 DNA replication protein; PFAM: IstB-like ATP binding protein
YP_003682348.1	KEGG: tcu:Tcur_3944  DNA-binding protein; SPTR: C1YGB4  uncharacterized protein
YP_003682349.1	InterPro IPR013762:IPR002104:IPR011010; KEGG: stp:Strop_0559 phage integrase family protein; PFAM: integrase family protein; SPTR: C1YGB3 Phage integrase family protein; PFAM: Phage integrase family
YP_003682350.1	KEGG: det:DET1478 hypothetical protein; SPTR: Q3Z6H1  uncharacterized protein
YP_003682351.1	InterPro IPR011010; KEGG: fre:Franean1_2186 hypothetical protein; SPTR: C1YGB2  uncharacterized protein; PFAM: Phage integrase family
YP_003682352.1	KEGG: mva:Mvan_1117 hypothetical protein; SPTR: C1YGB1  uncharacterized protein
YP_003682353.1	InterPro IPR004843; KEGG: tfu:Tfu_2852  integral membrane protein; PFAM: metallophosphoesterase; SPTR: C1YGB0 Calcineurin-like phosphoesterase; PFAM: Calcineurin-like phosphoesterase
YP_003682354.1	COGs: COG3824 conserved hypothetical protein; InterPro IPR010428; KEGG: tfu:Tfu_2853 hypothetical protein; PFAM: protein of unknown function DUF1025; SPTR: C1YGA9 Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF1025)
YP_003682355.1	InterPro IPR011701:IPR016196; KEGG: tfu:Tfu_2854 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YGA8 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003682356.1	SPTR: C1YGA7  uncharacterized protein
YP_003682357.1	COGs: COG1983  stress-responsive transcriptional regulator protein; InterPro IPR007168; KEGG: tfu:Tfu_2855  stress-responsive transcriptional regulator; PFAM: PspC domain protein; SPTR: C1YGA6  stress-responsive transcriptional regulator; PFAM: PspC domain
YP_003682358.1	InterPro IPR001647:IPR009057:IPR012287; KEGG: ami:Amir_3949 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YGA5 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003682359.1	InterPro IPR009002:IPR019920:IPR011576; KEGG: tfu:Tfu_2318 hypothetical protein; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: C1YGA4 pyridoxamine 5'-phosphate oxidase; TIGRFAM:  F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme
YP_003682360.1	InterPro IPR011991; KEGG: hau:Haur_4580 regulatory protein, MarR; SPTR: C1YGA3  uncharacterized protein
YP_003682361.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639:IPR000073; KEGG: rci:RCIX2240 alpha/beta family hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YGA2 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003682362.1	InterPro IPR016125; KEGG: sco:SCO2394 secreted protein; SPTR: C1YGA1  uncharacterized protein
YP_003682363.1	COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: cpi:Cpin_4080 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: C1YGA0 Predicted flavoprotein; PFAM: NADPH-dependent FMN reductase
YP_003682364.1	InterPro IPR001647:IPR009057:IPR011075:IPR012287; KEGG: xce:Xcel_2792 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YG99 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003682365.1	COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR003042:IPR006076; KEGG: sen:SACE_6186 monooxygenase, FAD-binding; PFAM: FAD dependent oxidoreductase; SPTR: C1YG98 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain
YP_003682366.1	InterPro IPR011701:IPR016196; KEGG: mva:Mvan_5900 major facilitator superfamily transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YG97 Arabinose efflux permease family protein; PFAM: PUCC protein; Major Facilitator Superfamily
YP_003682367.1	InterPro IPR000835:IPR011991; KEGG: sgr:SGR_762 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YG96 transcriptional regulator; PFAM: MarR family
YP_003682368.1	COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR013813:IPR006175; KEGG: sgr:SGR_763 hypothetical protein; PFAM: endoribonuclease L-PSP; SPTR: C1YG95  translation initiation inhibitor, yjgF family; PFAM: endoribonuclease L-PSP
YP_003682369.1	COGs: COG1024 enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: ara:Arad_9864 enoyl-CoA hydratase protein; PFAM: enoyl-CoA hydratase/isomerase; SPTR: C1YG94 enoyl-CoA hydratase/carnithine racemase; PFAM: enoyl-CoA hydratase/isomerase family
YP_003682370.1	InterPro IPR001647:IPR009057:IPR012287; KEGG: fre:Franean1_4596 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YG93 transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003682371.1	COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR014021:IPR001650:IPR014014:IPR011545:IPR 014001; KEGG: sma:SAV_4155 ATP-dependent RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase; SMART: DEAD-like helicase ; helicase domain protein; SPTR: C1YG92 DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_003682372.1	COGs: COG1278 Cold shock protein; InterProIPR011129:IPR012156:IPR002059:IPR012340:IPR 016027:IPR019844; KEGG: sco:SCO0527 cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: C1YG91 Cold-shock DNA-binding protein family; PFAM: 'Cold-shock' DNA-binding domain
YP_003682373.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sgr:SGR_7090t TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YG90 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003682374.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: sgr:SGR_7091t  short chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YG89  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003682375.1	KEGG: tfu:Tfu_2869 hypothetical protein; SPTR: C1YG87  uncharacterized protein
YP_003682376.1	KEGG: GE23625 gene product from transcript GE23625-RA; SPTR: C1YG86  uncharacterized protein
YP_003682377.1	InterPro IPR020476:IPR000086:IPR015797:IPR020084; KEGG: saq:Sare_4804 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: C1YG85 ADP-ribose pyrophosphatase; PFAM: NUDIX domain
YP_003682378.1	KEGG: sro:Sros_8297 hypothetical protein; SPTR: C1YGI2  uncharacterized protein
YP_003682379.1	KEGG: ami:Amir_6315 hypothetical protein; SPTR: C1YGI1  uncharacterized protein
YP_003682380.1	COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR001962:IPR014729; KEGG: ami:Amir_6316 asparagine synthase; PFAM: asparagine synthase; SPTR: C1YGI0 Asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase
YP_003682381.1	KEGG: ami:Amir_6317 hypothetical protein; SPTR: C1YGH9  uncharacterized protein
YP_003682382.1	COGs: COG1670 acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182:IPR016181; KEGG: ami:Amir_6318 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YGH8 acetyltransferase, ribosomal protein N-acetylase; PFAM: acetyltransferase (GNAT) family
YP_003682383.1	InterPro IPR007278; KEGG: sro:Sros_8369 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YGH7  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003682384.1	InterPro IPR001387:IPR010982; KEGG: tfu:Tfu_0977 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YGH6 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003682385.1	InterPro IPR003594; KEGG: tcu:Tcur_0374  anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: C1YGH5 histidine kinase; PFAM: histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003682386.1	KEGG: hypothetical protein; SPTR: C1YGH4  uncharacterized protein
YP_003682387.1	COGs: COG1247 Sortase and related acyltransferase; InterPro IPR001845:IPR000182:IPR016181:IPR011991; KEGG: sen:SACE_4980 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: C1YFV1 Sortase-like acyltransferase; PFAM: Bacterial regulatory protein, arsR family; acetyltransferase (GNAT) family
YP_003682388.1	InterPro IPR013027:IPR006076; KEGG: sen:SACE_4981 flavin binding monooxygenase; PFAM: FAD dependent oxidoreductase; SPTR: C1YFV0 FAD dependent oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003682389.1	InterPro IPR011701:IPR016196; KEGG: sen:SACE_4982 integral membrane transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YFU9 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003682390.1	COGs: COG2072 flavoprotein involved in K+ transport; InterPro IPR013027:IPR001327:IPR000103:IPR006076; KEGG: rer:pREL1_0108  FAD-dependent oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; SPTR: C1YFU8 Predicted flavoprotein involved in K+ transport; PFAM: Flavin-binding monooxygenase-like
YP_003682391.1	COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR004706:IPR002657; KEGG: sco:SCO3698 heavy metal resistance membrane protein; PFAM: sodium symporter; SPTR: C1YFU7 Arsenical-resistance protein; TIGRFAM: arsenic resistance protein; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenic resistance protein
YP_003682392.1	InterPro IPR001845:IPR011991; KEGG: sco:SCO3699 transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: C1YFU6 ArsR family transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family
YP_003682393.1	COGs: COG0394 protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: sma:SAV_3756 low molecular weight protein tyrosine phosphatase; PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight; SPTR: C1YFU5 protein-tyrosine-phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_003682394.1	COGs: COG1968 Uncharacterized bacitracin resistance protein; InterPro IPR003824; KEGG: tfu:Tfu_1838 undecaprenyl pyrophosphate phosphatase; PFAM: bacitracin resistance protein BacA; PRIAM: undecaprenyl-diphosphatase; SPTR: C1YFU4 undecaprenyl-diphosphatase; TIGRFAM: undecaprenol kinase; PFAM: bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP
YP_003682395.1	KEGG: tfu:Tfu_0152 hypothetical protein; SPTR: C1YFU2  uncharacterized protein
YP_003682396.1	KEGG: ami:Amir_2629 hypothetical protein; SPTR: C1YFU1  uncharacterized protein
YP_003682397.1	COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transporter ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: ami:Amir_2628 ABC transporter related; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YFU0 ABC-type nitrate/sulfonate/bicarbonate transporter ATPase component; PFAM: ABC transporter
YP_003682398.1	COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transporter permease; InterPro IPR000515; KEGG: kra:Krad_3112 binding-protein-dependent transporters inner membrane component; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YFT9 ABC-type nitrate/sulfonate/bicarbonate transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003682399.1	COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transporters periplasmic components; InterPro IPR017909:IPR015168; KEGG: kra:Krad_3111 NMT1/THI5 like domain protein; PFAM: NMT1/THI5 like domain protein; SPTR: C1YFT7 ABC-type nitrate/sulfonate/bicarbonate transporter periplasmic component; PFAM: NMT1/THI5 like
YP_003682400.1	COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048; KEGG: kra:Krad_3110 luciferase family protein; PFAM: Luciferase-like, subgroup; SPTR: C1YFT6 Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like monooxygenase
YP_003682401.1	KEGG: sen:SACE_3117 hypothetical protein; SPTR: C1YFT4  uncharacterized protein; PFAM: protein of unknown function (DUF2795)
YP_003682402.1	COGs: COG2508 Regulator of polyketide synthase expression; InterPro IPR002197; KEGG: ami:Amir_1083  PucR family transcriptional regulator; PFAM: helix-turn-helix Fis-type; SPTR: C1YFT2 Bacterial regulatory helix-turn-helix protein, lysR family
YP_003682403.1	InterPro IPR005829:IPR005828:IPR016196; KEGG: cro:ROD_16251 major facilitator superfamily transporter; PFAM: general substrate transporter; SPTR: C1YFT1 Sugar (And other) transporter; PFAM: Major Facilitator Superfamily; TIGRFAM: metabolite-proton symporter
YP_003682404.1	COGs: COG3004 Na+/H+ antiporter; InterPro IPR004670; KEGG: tfu:Tfu_2301 Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; SPTR: C1YFS9 Na+/H+ antiporter NhaA; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA
YP_003682405.1	COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: svi:Svir_24780 anion transporter; PFAM: sodium/sulfate symporter; SPTR: C1YFS7 Anion transporter; TIGRFAM: anion transporter; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter
YP_003682406.1	COGs: COG2358 TRAP-type uncharacterized transporter periplasmic component; InterPro IPR015168:IPR011852; KEGG: ami:Amir_5695 TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like domain protein; SPTR: C1YFS6 TRAP transporter solute receptor, TAXI family; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family
YP_003682407.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR003660:IPR004358:IPR003661:IPR 003594:IPR009082; KEGG: ami:Amir_5696 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SPTR: C1YFS5 Sensor protein; PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003682408.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001867:IPR001789:IPR011991:IPR011006; KEGG: ami:Amir_5698 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver; transcriptional regulator; SPTR: C1YFS1 Two component transcriptional regulator; PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal
YP_003682409.1	InterPro IPR007278; KEGG: tfu:Tfu_0973 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YFR9  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003682410.1	InterPro IPR002182:IPR011990; KEGG: tfu:Tfu_0403 hypothetical protein; PFAM: NB-ARC domain protein; SPTR: C1YFR8 NB-ARC domain-containing protein; PFAM: NB-ARC domain
YP_003682411.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR003593:IPR003959; KEGG: tfu:Tfu_0402 ATPase; PFAM: ATPase AAA central domain protein; SMART: ATPase AAA; SPTR: C1YFU3 MoxR-like ATPase; PFAM: AAA domain (dynein-related subfamily)
YP_003682412.1	KEGG: tfu:Tfu_0401 hypothetical protein; SPTR: C1YFT8  uncharacterized protein
YP_003682413.1	InterPro IPR009003; KEGG: tfu:Tfu_0400 hypothetical protein; SPTR: C1YFT5  uncharacterized protein
YP_003682414.1	COGs: COG2259 membrane protein; InterPro IPR011637; KEGG: ami:Amir_6351 DoxX family protein; PFAM: DoxX family protein; SPTR: C1YFT3 Predicted membrane protein, COG2259; PFAM: DoxX
YP_003682415.1	InterPro IPR000835:IPR011991; KEGG: tcu:Tcur_0686 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YFT0 transcriptional regulator, MarR family; PFAM: MarR family
YP_003682416.1	COGs: COG3236 conserved hypothetical protein; InterPro IPR012816; KEGG: sco:SCO5665 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C1YFS8  uncharacterized protein; PFAM: Domain of unknown function (DUF1768); TIGRFAM: conserved hypothetical protein, ribA/ribD-fused
YP_003682417.1	KEGG: ebw:BWG_4077  DNA-binding transcriptional regulator; SPTR: C1YFS3  uncharacterized protein
YP_003682418.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: sgr:SGR_6912 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YFS2 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003682419.1	InterPro IPR005490; KEGG: tfu:Tfu_1018 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; SPTR: C1YFS0 Uncharacterized conserved protein; PFAM: L,D-transpeptidase catalytic domain
YP_003682420.1	COGs: COG2076 membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: nfa:nfa19760  multi-drug efflux transporter; PFAM: small multidrug resistance protein; SPTR: C1YFR7 Cation/cationic drug transporter; PFAM: Small Multidrug Resistance protein
YP_003682421.1	COGs: COG3226 conserved hypothetical protein; InterPro IPR001647:IPR009057; KEGG: svi:Svir_07900 hypothetical protein; PFAM: regulatory protein TetR; SPTR: C1YFW7 Uncharacterized conserved protein; PFAM: Bacterial regulatory proteins, tetR family
YP_003682422.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR009057; KEGG: cai:Caci_4510 transcriptional regulator, AraC family; SMART: Helix-turn-helix, AraC domain; SPTR: C1YFR6 AraC family transcriptional regulator
YP_003682423.1	InterPro IPR017520:IPR017517; KEGG: rer:RER_03520 hypothetical protein; SPTR: C1YFR5  uncharacterized protein; PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: conserved hypothetical protein TIGR03086; uncharacterized Actinobacterial protein TIGR03083
YP_003682424.1	COGs: COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); InterPro IPR000667:IPR012338; KEGG: sen:SACE_5713 penicillin binding protein; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; PRIAM: serine-type D-Ala-D-Ala carboxypeptidase; SPTR: C1YFR4 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
YP_003682425.1	COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transporter ATPase component; InterProIPR010066:IPR003439:IPR017871:IPR003593:IPR 013563; KEGG: tfu:Tfu_1630 oligopeptide/dipeptide ABC transporter ATP-binding protein, C-terminal; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; SPTR: C1YFR3 oligopeptide/dipeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide transporter C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK; oligopeptide/dipeptide ABC transporter ATP-binding protein, C-terminal domain
YP_003682426.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: tfu:Tfu_1631 ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YFR2 ABC-type dipeptide/oligopeptide/nickel transporter permease; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003682427.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transporters permeases; InterPro IPR000515; KEGG: tfu:Tfu_1632  ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YFR1 ABC-type dipeptide/oligopeptide/nickel transporter permease; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003682428.1	COGs: COG0747 ABC-type dipeptide transporter periplasmic component; InterPro IPR000914; KEGG: tfu:Tfu_1633  solute-binding dependent transport lipoprotein; PFAM: extracellular solute-binding protein family 5; SPTR: C1YFR0 ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_003682429.1	KEGG: tfu:Tfu_2927 hypothetical protein; SPTR: C1YFQ9  uncharacterized protein
YP_003682430.1	COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: tfu:Tfu_2931 hypothetical protein; PFAM: rhomboid family protein; SPTR: C1YFQ8 Uncharacterized membrane protein; PFAM: Rhomboid family
YP_003682431.1	COGs: COG2113 ABC-type proline/glycine betaine transport systems periplasmic components; InterPro IPR007210; KEGG: tfu:Tfu_2928 glycine betaine transporter permease; PFAM: substrate-binding region of ABC-type glycine betaine transporter; SPTR: C1YFQ7 ABC-type proline/glycine betaine transporter periplasmic component; PFAM: substrate binding domain of ABC-type glycine betaine transporter
YP_003682432.1	COGs: COG4176 ABC-type proline/glycine betaine transport system permease; InterPro IPR000515; KEGG: tfu:Tfu_2929 polysaccharide/polyol phosphate ABC transporter permease; PFAM: binding-protein-dependent transporters inner membrane component; SPTR: C1YFQ6 ABC-type proline/glycine betaine transporter permease component; PFAM: Binding-protein-dependent transporter inner membrane component
YP_003682433.1	COGs: COG4175 ABC-type proline/glycine betaine transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871:IPR005892; KEGG: tfu:Tfu_2930 glycine betaine/L-proline transport ATP-binding subunit; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YFQ5 glycine betaine/L-proline transport ATP binding subunit; TIGRFAM: glycine betaine/L-proline ABC transporter ATPase; PFAM: ABC transporter; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit
YP_003682434.1	COGs: COG0717 deoxycytidine deaminase; InterPro IPR008180:IPR011962; KEGG: nca:Noca_4412 deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase; SPTR: C1YFQ4 dCTP deaminase; TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: 2'-deoxycytidine 5'-triphosphate deaminase (DCD); TIGRFAM: deoxycytidine triphosphate deaminase
YP_003682435.1	InterPro IPR008172; KEGG: tcu:Tcur_0179 hypothetical protein; PFAM: adenylate cyclase; SPTR: C1YFQ3 adenylate cyclase, class 2 (Thermophilic); PFAM: CYTH domain
YP_003682436.1	KEGG: tai:Taci_1222 hypothetical protein; SPTR: C1YFQ2  uncharacterized protein
YP_003682437.1	KEGG: apt:APA01_18980 cell division protein FtsW; SPTR: C1YFQ1  uncharacterized protein
YP_003682438.1	KEGG: sro:Sros_3656 hypothetical protein; SPTR: C1YFQ0  uncharacterized protein
YP_003682439.1	KEGG: ote:Oter_0310 hypothetical protein; SPTR: C1YFP9  uncharacterized protein
YP_003682440.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792:IPR016032:IPR011991; KEGG: ami:Amir_4995 two component LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: C1YFP8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family
YP_003682441.1	KEGG: nca:Noca_2794 membrane-bound lytic murein transglycosylase B-like; SPTR: C1YFP7  uncharacterized protein
YP_003682442.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006:IPR011991; KEGG: svi:Svir_31270 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C1YFP6 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal
YP_003682443.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR003660:IPR004358:IPR003661:IPR 003594:IPR009082; KEGG: fre:Franean1_5705 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SPTR: C1YFP5 Sensor protein; PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003682444.1	KEGG: sen:SACE_5554 hypothetical protein; SPTR: C1YFP4  uncharacterized protein
YP_003682445.1	KEGG: sro:Sros_3110 hypothetical protein; SPTR: C1YFP3  uncharacterized protein
YP_003682446.1	COGs: COG2249  NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: sco:SCO6447 NAD(P)H oxidoreductase; PFAM: NAD(P)H dehydrogenase (quinone); SPTR: C1YFP2  NADPH-quinone reductase (Modulator of drug activity B); PFAM: Flavodoxin-like fold
YP_003682447.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR018060:IPR020449:IPR000005:IPR009057:IPR 012287; KEGG: sco:SCO6448 AraC-like transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: C1YFP1 DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003682448.1	COGs: COG2124 cytochrome P450; InterPro IPR002397:IPR001128:IPR017972; KEGG: sma:SAV_1308 cytochrome P450 hydroxylase; PFAM: cytochrome P450; SPTR: C1YFP0 cytochrome P450; PFAM: cytochrome P450
YP_003682449.1	COGs: COG2124 cytochrome P450; InterPro IPR002397:IPR001128:IPR017972; KEGG: sgr:SGR_3494  cytochrome P450; SPTR: C1YFN9 cytochrome P450
YP_003682450.1	KEGG: tfu:Tfu_0698 hypothetical protein; SPTR: C1YFN8  uncharacterized protein
YP_003682451.1	InterProIPR001919:IPR003305:IPR004197:IPR001701:IPR 008928:IPR014756:IPR008979:IPR008965:IPR018221:IPR013783:I PR012341:IPR012291; KEGG: tfu:Tfu_1627 cellulose 1,4-beta-cellobiosidase; PFAM: glycoside hydrolase family 9; glycoside hydrolase family 9 domain protein Ig domain protein; carbohydrate-binding CenC domain protein; cellulose-binding family II; SMART: cellulose-binding family II; SPTR: C1YFN7 cellulose 1,4-beta-cellobiosidase; PFAM: cellulose binding domain; glycosyl hydrolase family 9; carbohydrate binding domain; N-terminal ig-like domain of cellulase
YP_003682452.1	InterPro IPR009597; KEGG: sro:Sros_3147 protein of unknown function DUF1206; PFAM: protein of unknown function DUF1206; SPTR: C1YFN6  uncharacterized protein; PFAM: Domain of Unknown Function (DUF1206)
YP_003682453.1	COGs: COG2133 glucose/sorbosone dehydrogenase; InterPro IPR012938:IPR011041:IPR011042; KEGG: tfu:Tfu_0624  oxidoreductase; PFAM: glucose sorbosone dehydrogenase; SPTR: C1YFN5 glucose/sorbosone dehydrogenase; PFAM: glucose / Sorbosone dehydrogenase
YP_003682454.1	COGs: COG4129 membrane protein; KEGG: sen:SACE_4168 integral membrane protein; SPTR: C1YFN4 Predicted membrane protein, COG4129; PFAM: Bacterial protein of unknown function (DUF939)
YP_003682455.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR013595:IPR000073; KEGG: sen:SACE_2935 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; TAP domain protein; SPTR: C1YFN3 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: TAP-like protein; alpha/beta hydrolase fold
YP_003682456.1	KEGG: hypothetical protein LOC725726; SPTR: C1YFN2  uncharacterized protein
YP_003682457.1	InterPro IPR010773; KEGG: fal:FRAAL4124 hypothetical protein; PFAM: protein of unknown function DUF1360; SPTR: C1YFN1  uncharacterized protein; PFAM: protein of unknown function (DUF1360)
YP_003682458.1	COGs: COG3387 glucoamylase and related glycosyl hydrolase; InterPro IPR008928:IPR012341:IPR011613; KEGG: tfu:Tfu_0046 hypothetical protein; PFAM: glycoside hydrolase 15-related; SPTR: C1YFN0 glycosyl hydrolase, glucoamylase; PFAM: glycosyl hydrolases family 15
YP_003682459.1	COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002347:IPR016040:IPR002198; KEGG: sco:SCO7413 short chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YFM9 Short-chain alcohol dehydrogenase; PFAM: short chain dehydrogenase
YP_003682460.1	KEGG: tfu:Tfu_0891 hypothetical protein; SPTR: C1YFM8  uncharacterized protein; PFAM: protein of unknown function (DUF3140)
YP_003682461.1	InterPro IPR001411:IPR016196:IPR011701; KEGG: stp:Strop_1078 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YFM7 Sugar phosphate permease; PFAM: Major Facilitator Superfamily
YP_003682462.1	KEGG: ELG27; exostosin-like glycosyltransferase; SPTR: C1YFM6  uncharacterized protein
YP_003682463.1	KEGG: sma:SAV_5327 hypothetical protein; SPTR: C1YFM5  uncharacterized protein
YP_003682464.1	COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: sat:SYN_00349 pentapeptide repeat-containing protein; PFAM: pentapeptide repeat protein; SPTR: Q2LXJ6 Pentapeptide repeat domain protein; PFAM: Pentapeptide repeats (8 copies)
YP_003682465.1	SPTR: C1YFM4  uncharacterized protein
YP_003682467.1	KEGG: sma:SAV_4094 hypothetical protein; SPTR: C1YFM3  uncharacterized protein
YP_003682468.1	KEGG: sen:SACE_0588 hypothetical protein; SPTR: C1YFM2  uncharacterized protein
YP_003682469.1	KEGG: pde:Pden_0685 TolA family protein; SPTR: C1YFM1  uncharacterized protein
YP_003682470.1	KEGG: sma:SAV_5443 hypothetical protein; SPTR: C1YFM0  uncharacterized protein
YP_003682471.1	InterPro IPR008912:IPR002035; KEGG: sro:Sros_6471 von Willebrand factor A; PFAM: von Willebrand factor A; SMART: von Willebrand factor type A; SPTR: C1YFL9 VWA domain containing CoxE-like protein; PFAM: VWA domain containing CoxE-like protein
YP_003682472.1	KEGG: tcu:Tcur_1841 hypothetical protein; SPTR: C1YFL8  uncharacterized protein
YP_003682473.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR011704; KEGG: tfu:Tfu_1459 hypothetical protein; PFAM: ATPase associated with various cellular activities AAA_5; SPTR: C1YFL7 ATPase family protein associated with various cellular activities (AAA); PFAM: AAA domain (dynein-related subfamily)
YP_003682474.1	KEGG: sro:Sros_6474 hypothetical protein; SPTR: C1YFL6  uncharacterized protein
YP_003682475.1	InterPro IPR007527; KEGG: tfu:Tfu_1457 hypothetical protein; PFAM: zinc finger SWIM domain protein; SPTR: C1YFL5 SWIM zinc finger-containing protein; PFAM: SWIM zinc finger
YP_003682476.1	COGs: COG2124 cytochrome P450; InterPro IPR002397:IPR001128:IPR017972; KEGG: fra:Francci3_4334  cytochrome P450; SPTR: C1YFL4 cytochrome P450; PFAM: cytochrome P450
YP_003682477.1	COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR019945:IPR016048; KEGG: rha:RHA1_ro01290 5,10-methylenetetrahydromethanopterin reductase; PFAM: Luciferase-like, subgroup; SPTR: C1YFL3 Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; TIGRFAM: F420-dependent oxidoreductase, G6PDH family; PFAM: Luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase, G6PDH family
YP_003682478.1	COGs: COG0753 catalase; InterProIPR018028:IPR011614:IPR020835:IPR010582:IPR 002818:IPR002226; KEGG: sen:SACE_3861 catalase HPII; PFAM: catalase related subgroup; catalase domain protein; ThiJ/PfpI domain protein; PRIAM: catalase; SPTR: C1YFL2 catalase; PFAM: catalase; DJ-1/PfpI family; catalase-related immune-responsive
YP_003682479.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: tcu:Tcur_0575 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YFL1  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003682480.1	InterPro IPR009317; KEGG: tfu:Tfu_0893 hypothetical protein; PFAM: cation transport regulator ChaB; SPTR: C1YFL0 ChaB protein; PFAM: Rho termination factor, N-terminal domain; ChaB
YP_003682481.1	KEGG: sro:Sros_5516 triacylglycerol lipase; PRIAM: triacylglycerol lipase; SPTR: C1YFK9 Cutinase; PFAM: Dienelactone hydrolase family
YP_003682482.1	InterPro IPR002711; KEGG: fal:FRAAL4530 hypothetical protein; PFAM: HNH endonuclease; SPTR: C1YFK8 HNH endonuclease; PFAM: HNH endonuclease; Domain of unknown function DUF222
YP_003682483.1	COGs: COG0683 ABC-type branched-chain amino acid transporters periplasmic component; InterPro IPR001828; KEGG: tfu:Tfu_1779 hypothetical protein; PFAM: extracellular ligand-binding receptor; SPTR: C1YFK7 amino acid-binding protein; PFAM: Receptor family ligand binding region
YP_003682484.1	COGs: COG4177 ABC-type branched-chain amino acid transporter permease; InterPro IPR001851; KEGG: tfu:Tfu_1780 ABC transporter permease; PFAM: inner-membrane translocator; SPTR: C1YFK6 ABC-type branched-chain amino acid transporter permease; PFAM: Branched-chain amino acid transporter / permease
YP_003682485.1	COGs: COG0559 Branched-chain amino acid ABC-type transporter permeases; InterPro IPR001851; KEGG: tfu:Tfu_1781 ABC transporter permease; PFAM: inner-membrane translocator; SPTR: C1YFK5 Branched-chain amino acid ABC-type transporter permease; PFAM: Branched-chain amino acid transporter / permease
YP_003682486.1	COGs: COG0410 ABC-type branched-chain amino acid transporters ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: tfu:Tfu_1782 ABC-type branched-chain amino acid transporters ATPase component; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YFK4 L-isoleucine ABC transporter ATP-binding protein; L-leucine ABC transporter ATP-binding protein; L-valine ABC transporter ATP-binding protein; PFAM: ABC transporter
YP_003682487.1	COGs: COG0411 ABC-type branched-chain amino acid transporters ATPase component; InterPro IPR003593:IPR003439; KEGG: tfu:Tfu_1783 ABC-type branched-chain amino acid transporters ATPase component; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YFK3 ABC-type branched-chain amino acid transporter ATPase component; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter
YP_003682488.1	COGs: COG3899 ATPase; InterPro IPR003593:IPR000792:IPR011991:IPR016032; KEGG: sro:Sros_5515 response regulator receiver protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; ATPase AAA; SPTR: C1YFK2 transcriptional regulator, luxR family; PFAM: Bacterial regulatory proteins, luxR family
YP_003682489.1	COGs: COG2170 conserved hypothetical protein; InterPro IPR006336:IPR011793; KEGG: sro:Sros_9080 uncharacterized enzyme; PFAM: glutamate--cysteine ligase; SPTR: C1YFK1 Uncharacterized enzyme; PFAM: glutamate-cysteine ligase family 2(GCS2); TIGRFAM: uncharacterized enzyme
YP_003682490.1	COGs: COG2942 N-acyl-D-glucosamine 2-epimerase; InterPro IPR012341:IPR008928:IPR010819; KEGG: tfu:Tfu_1736 hypothetical protein; PFAM: N-acylglucosamine 2-epimerase; SPTR: C1YFJ9 N-acyl-D-glucosamine 2-epimerase; PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
YP_003682491.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR016040:IPR002198:IPR002347; KEGG: sen:SACE_2206 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YFJ8  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003682492.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: sco:SCO1264 hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C1YFJ7 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003682493.1	KEGG: sro:Sros_6199 hypothetical protein; SPTR: C1YFJ6  uncharacterized protein
YP_003682494.1	COGs: COG0171 NAD synthase; InterPro IPR014729:IPR003694; KEGG: sco:SCO0506 NAD synthetase; PFAM: NAD synthase; SPTR: C1YFJ5 NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; TIGRFAM: NAD+ synthetase
YP_003682495.1	COGs: COG3554 conserved hypothetical protein; InterPro IPR009467; KEGG: tfu:Tfu_2999 hypothetical protein; PFAM: protein of unknown function DUF1089; SPTR: C1YFJ4 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF1089)
YP_003682496.1	COGs: COG0591 Na+/proline symporter; InterPro IPR001734:IPR011851:IPR019900; KEGG: hha:Hhal_0554 sodium/proline symporter; PFAM: Na+/solute symporter; SPTR: C1YFJ3 Sodium/proline symporter; TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Sodium:solute symporter family; TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily
YP_003682497.1	InterPro IPR009003; KEGG: tfu:Tfu_0400 hypothetical protein; SPTR: C1YFJ2  uncharacterized protein
YP_003682498.1	InterPro IPR011990:IPR002182:IPR011717; KEGG: tfu:Tfu_0403 hypothetical protein; PFAM: NB-ARC domain protein; Tetratricopeptide TPR_4; SPTR: C1YGL6 NB-ARC domain-containing protein; PFAM: NB-ARC domain
YP_003682499.1	InterPro IPR007278; KEGG: ami:Amir_6435 protein of unknown function DUF397; PFAM: protein of unknown function DUF397; SPTR: C1YGL5  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003682500.1	KEGG: sco:SCO2447 hypothetical protein; SPTR: C1YGL4  uncharacterized protein
YP_003682501.1	COGs: COG0208 ribonucleotide reductase beta subunit; InterPro IPR012348:IPR000358:IPR009078; KEGG: tfu:Tfu_3002 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase; PRIAM: ribonucleoside-diphosphate reductase; SPTR: C1YGL3 ribonucleotide reductase subunit beta; PFAM: ribonucleotide reductase, small chain
YP_003682502.1	InterProIPR000788:IPR008926:IPR013509:IPR005144:IPR 013346; KEGG: tfu:Tfu_3001 ribonucleoside-diphosphate reductase; PFAM: ribonucleotide reductase large subunit; ribonucleotide reductase large subunit domain protein; PRIAM: ribonucleoside-diphosphate reductase; SPTR: C1YGL2 ribonucleoside-diphosphate reductase; TIGRFAM: ribonucleoside-diphosphate reductase, subunit alpha; PFAM: ribonucleotide reductase, all-alpha domain; ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, subunit alpha; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
YP_003682503.1	InterPro IPR002790; KEGG: tfu:Tfu_3005 hypothetical protein; PFAM: protein of unknown function DUF88; SPTR: C1YGL0 Uncharacterized conserved protein; PFAM: protein of unknown function DUF88
YP_003682504.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013325:IPR013324:IPR007627:IPR013249:IPR 014284; KEGG: sro:Sros_0395 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: C1YGK9 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003682505.1	KEGG: sen:SACE_6487 hypothetical protein; SPTR: C1YGK8  uncharacterized protein
YP_003682506.1	KEGG: GF19382 gene product from transcript GF19382-RA; SPTR: C1YGK7  uncharacterized protein
YP_003682507.1	KEGG: ade:Adeh_1681 PE-PGRS family protein; SPTR: Q2IIH7 PE-PGRS family protein
YP_003682508.1	KEGG: tcu:Tcur_0623 ATPase involved in chromosome partitioning-like protein; SPTR: C1YGK6  uncharacterized protein
YP_003682509.1	InterPro IPR006707; KEGG: sma:SAV_5440 hypothetical protein; PFAM: protein of unknown function DUF571; SPTR: C1YGK5 Secretion protein snm4; TIGRFAM: secretion protein snm4; PFAM: protein of unknown function (DUF571); TIGRFAM: secretion protein snm4
YP_003682510.1	KEGG: bcv:Bcav_3593 hypothetical protein; SPTR: C1YGK4  uncharacterized protein
YP_003682511.1	KEGG: sma:SAV_5433 hypothetical protein; SPTR: C1YGK3  uncharacterized protein
YP_003682512.1	KEGG: sen:SACE_0590 hypothetical protein; SPTR: C1YGK2  uncharacterized protein
YP_003682513.1	KEGG: sen:SACE_0588 hypothetical protein; SPTR: C1YGK1  uncharacterized protein
YP_003682514.1	KEGG: sma:SAV_5324 hypothetical protein; SPTR: C1YGK0  uncharacterized protein
YP_003682515.1	KEGG: svi:Svir_23500 hypothetical protein; SPTR: C1YGJ9  uncharacterized protein
YP_003682516.1	KEGG: sma:SAV_5443 hypothetical protein; SPTR: C1YGJ8  uncharacterized protein
YP_003682517.1	COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR003593:IPR002543; KEGG: sma:SAV_5442 FtsK/SpoIIIE family protein; PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase AAA; SPTR: C1YGJ7 DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: FtsK/SpoIIIE family
YP_003682518.1	InterPro IPR010432; KEGG: tfu:Tfu_0446 hypothetical protein; PFAM: RDD domain containing protein; SPTR: C1YGJ6 Uncharacterized conserved protein; PFAM: RDD family
YP_003682519.1	KEGG: sro:Sros_0221 hypothetical protein; SPTR: C1YGJ5  uncharacterized protein
YP_003682520.1	COGs: COG1670 acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182:IPR016181; KEGG: mbt:JTY_0824 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YGJ4 acetyltransferase, ribosomal protein N-acetylase; PFAM: acetyltransferase (GNAT) family
YP_003682521.1	KEGG: tcu:Tcur_0211 hypothetical protein; SPTR: C1YGJ3  uncharacterized protein
YP_003682522.1	COGs: COG1324 conserved hypothetical protein involved in tolerance to divalent cations; InterPro IPR004323:IPR011322; KEGG: tfu:Tfu_3007 hypothetical protein; PFAM: CutA1 divalent ion tolerance protein; SPTR: C1YGJ2 Uncharacterized protein involved in tolerance to divalent cations; PFAM: CutA1 divalent ion tolerance protein
YP_003682523.1	COGs: COG0461 Orotate phosphoribosyltransferase; InterPro IPR004467:IPR000836; KEGG: tfu:Tfu_3008 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Orotate phosphoribosyltransferase; SPTR: C1YGJ1 Orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase
YP_003682524.1	KEGG: tfu:Tfu_3009 hypothetical protein; SPTR: C1YGJ0  uncharacterized protein
YP_003682525.1	COGs: COG0191 fructose/tagatose bisphosphate aldolase; InterPro IPR000771:IPR013785:IPR006411; KEGG: tfu:Tfu_3010 fructose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; SPTR: C1YGI9 fructose-bisphosphate aldolase; TIGRFAM: fructose-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, yeast/E. coli subtype
YP_003682526.1	InterPro IPR014487; KEGG: tfu:Tfu_3011 hypothetical protein; SPTR: C1YGI7  uncharacterized protein; PFAM: protein of unknown function (DUF3151)
YP_003682527.1	COGs: COG0104 adenylosuccinate synthase; InterPro IPR001114:IPR018220; KEGG: tfu:Tfu_3012 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; PRIAM: adenylosuccinate synthase; SMART: adenylosuccinate synthetase; SPTR: C1YGI6 adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase
YP_003682528.1	COGs: COG0151 phosphoribosylamine-glycine ligase; InterProIPR013817:IPR013815:IPR013816:IPR020560:IPR 016185:IPR011054:IPR020562:IPR020561:IPR011761:IPR000115:I PR020559; KEGG: tfu:Tfu_3013 phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; phosphoribosylglycinamide synthetase, N-domain; phosphoribosylglycinamide synthetase, C-domain; PRIAM: phosphoribosylamine--glycine ligase; SPTR: C1YGI5 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase, N domain; phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase
YP_003682529.1	COGs: COG0152 phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; InterPro IPR013816:IPR001636:IPR018236; KEGG: tfu:Tfu_3015 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: C1YGI4 phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_003682530.1	COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; InterPro IPR013792:IPR001986:IPR005750; KEGG: tfu:Tfu_3016 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); SPTR: C1YGI3 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_003682531.1	KEGG: tfu:Tfu_3017 hypothetical protein; SPTR: C1YG84  uncharacterized protein
YP_003682532.1	KEGG: sco:SCO2993 hypothetical protein; SPTR: C1YG83  uncharacterized protein
YP_003682533.1	KEGG: svi:Svir_07960 helix-turn-helix protein; SPTR: C1YG82  uncharacterized protein
YP_003682534.1	COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterProIPR001176:IPR015421:IPR015424:IPR004839:IPR 005861:IPR001917; KEGG: tfu:Tfu_3018  aminotransferase; PFAM: aminotransferase class I and II; SPTR: C1YG81 aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase
YP_003682535.1	KEGG: tfu:Tfu_3019 hypothetical protein; SPTR: Q47KH0  uncharacterized protein
YP_003682536.1	KEGG: tfu:Tfu_3020 hypothetical protein; SPTR: C1YG77  uncharacterized protein
YP_003682537.1	KEGG: tfu:Tfu_3021 hypothetical protein; SPTR: C1YG76  uncharacterized protein
YP_003682538.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013324:IPR013325:IPR007627:IPR013249:IPR 014325:IPR014284; KEGG: tfu:Tfu_3022  RNA polymerase sigma factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: C1YG75 RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, sigma-E family; TIGRFAM: RNA polymerase sigma-70 factor, sigma-E family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-E family
YP_003682539.1	COGs: COG1802 transcriptional regulators; InterPro IPR011711:IPR000524:IPR011991; KEGG: kra:Krad_2490 transcriptional regulator, GntR family; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: GntR family transcriptional regulator; regulatory protein GntR HTH; SPTR: C1YG74 transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003682540.1	COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: vap:Vapar_5679 mandelate racemase/muconate lactonizing protein; PFAM: mandelate racemase/muconate lactonizing protein; SPTR: C1YG73 Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase; PFAM: mandelate racemase / muconate lactonizing enzyme, C-terminal domain
YP_003682541.1	COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: bld:BLi00488 hypothetical protein; PFAM: sodium/sulfate symporter; SPTR: C1YG72 Anion transporter; TIGRFAM: anion transporter; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter
YP_003682542.1	COGs: COG0789 transcriptional regulator protein; InterProIPR000551:IPR004155:IPR011989:IPR009061:IPR 016024; KEGG: fre:Franean1_3566 MerR family transcriptional regulator; PFAM: regulatory protein MerR; PBS lyase HEAT domain protein repeat-containing protein; SMART: regulatory protein MerR; PBS lyase HEAT domain protein repeat-containing protein; SPTR: C1YG71 Predicted transcriptional regulator; PFAM: MerR family regulatory protein
YP_003682543.1	InterPro IPR011989:IPR016024; KEGG: fre:Franean1_3565 hypothetical protein; SPTR: C1YG70  uncharacterized protein
YP_003682544.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR000792:IPR001789:IPR011991:IPR011006:IPR 016032; KEGG: sro:Sros_4468 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YG69 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003682545.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: sco:SCO6139 sensor kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C1YG68 histidine kinase; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003682546.1	InterPro IPR003675; KEGG: sro:Sros_4470 abortive infection protein; PFAM: hypothetical protein; SPTR: C1YG67 Predicted metal-dependent membrane protease; PFAM: CAAX amino terminal protease family
YP_003682547.1	InterPro IPR000073; KEGG: sco:SCO4479 secreted hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: C4DSA1 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold
YP_003682548.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: rop:ROP_20270 oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YPK5  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003682549.1	InterPro IPR005829:IPR011701:IPR016196; KEGG: rer:RER_49490 MFS transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YPK4 nitrate/nitrite transporter; PFAM: Major Facilitator Superfamily
YP_003682550.1	COGs: COG1053 succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR003953; KEGG: rer:RER_49500 hypothetical protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: C1YPK3 succinate dehydrogenase/fumarate reductase flavoprotein subunit; PFAM: FAD binding domain; TIGRFAM: flavocytochrome C
YP_003682551.1	COGs: COG1028 dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: rer:RER_49520 oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YPK2  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003682552.1	InterPro IPR000391; KEGG: rop:ROP_20290 hypothetical protein; PFAM: aromatic-ring-hydroxylating dioxygenase subunit beta; SPTR: C1YPK1 Ring hydroxylating enzyme subunit beta; PFAM: Ring hydroxylating beta subunit
YP_003682553.1	COGs: COG1414 transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: rop:ROP_20300  IclR family transcriptional regulator; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; SPTR: C1YPK0 transcriptional regulator, COG1414; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_003682554.1	COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterPro IPR009010:IPR006656:IPR006657:IPR006655; KEGG: msm:MSMEG_2837 nitrate reductase NarB; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: C1YPJ9 Uncharacterized anaerobic dehydrogenase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain
YP_003682555.1	KEGG: nfa:nfa29000 hypothetical protein; SPTR: C1YPJ8  uncharacterized protein
YP_003682556.1	COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR003042:IPR002937; KEGG: saq:Sare_3795 amine oxidase; PFAM: amine oxidase; SPTR: C1YPJ7 Phytoene dehydrogenase-like oxidoreductase; PFAM: Flavin containing amine oxidoreductase
YP_003682557.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR016166:IPR012951:IPR006094; KEGG: fal:FRAAL4636  secreted FAD-linked oxidase; PFAM: Berberine/berberine domain protein; FAD linked oxidase domain protein; SPTR: C1YPJ6 FAD/FMN-dependent dehydrogenase; PFAM: Berberine and berberine like; FAD binding domain
YP_003682558.1	KEGG: hypothetical protein; SPTR: C1YPJ5  uncharacterized protein
YP_003682559.1	InterPro IPR005490; KEGG: sro:Sros_8763 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; SPTR: C1YPJ4 Ykud domain-containing protein
YP_003682560.1	KEGG: hypothetical protein; SPTR: C1YPJ3  uncharacterized protein
YP_003682561.1	COGs: COG1376 conserved hypothetical protein; InterPro IPR005490; KEGG: sro:Sros_8763 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; SPTR: C1YPJ2 Uncharacterized conserved protein; PFAM: L,D-transpeptidase catalytic domain
YP_003682562.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: sro:Sros_8764 response regulator receiver protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C1YPJ1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal
YP_003682563.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR009082:IPR003660:IPR003594:IPR003661:IPR 005467:IPR004358; KEGG: sgr:SGR_1088  two-component system sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SPTR: C1YPJ0 Sensor protein; PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003682564.1	KEGG: rmu:RMDY18_01380 ABC-type Mn2+/Zn2+ transport system, permease; SPTR: C1YPI9  uncharacterized protein
YP_003682565.1	KEGG: ach:Achl_1685 prolipoprotein diacylglyceryl transferase; SPTR: C1YPI8  uncharacterized protein
YP_003682566.1	InterPro IPR000412:IPR013525; KEGG: nfa:nfa21440  ABC transporter membrane protein; PFAM: ABC transporter; SPTR: C1YPI7 ABC-type multidrug transporter permease; PFAM: ABC-2 type transporter
YP_003682567.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterProIPR003593:IPR003439:IPR005894:IPR017871:IPR 019777; KEGG: sgr:SGR_4075  ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YPI6 Daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase; PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit
YP_003682568.1	InterPro IPR009061:IPR000551:IPR010093; KEGG: tfu:Tfu_2699 excisionase/Xis, DNA-binding; PFAM: regulatory protein MerR; SPTR: Q47LE0 Excisionase/Xis, DNA-binding; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family
YP_003682569.1	KEGG: pol:Bpro_1755 glycosyl transferase, group 1; SPTR: C1YPI4  uncharacterized protein
YP_003682570.1	KEGG: cai:Caci_7094 aldehyde dehydrogenase; SPTR: C1YPI3  uncharacterized protein
YP_003682571.1	SPTR: C1YPI2  uncharacterized protein
YP_003682572.1	KEGG: rlg:Rleg_4905 transposase IS66; SPTR: C1YPI1  uncharacterized protein
YP_003682573.1	InterPro IPR001387:IPR010982; KEGG: sro:Sros_2072 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YPI0 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003682574.1	InterPro IPR007278; KEGG: tfu:Tfu_1657 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YPH9  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003682575.1	COGs: COG2818 3-methyladenine DNA glycosylase; InterPro IPR005019:IPR011257; KEGG: tgr:Tgr7_2619 DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; PRIAM: DNA-3-methyladenine glycosylase I; SPTR: C1YPH8 DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I
YP_003682576.1	COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439:IPR017871; KEGG: tcu:Tcur_2147 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: D1A1M5 ABC transporter; PFAM: ABC transporter
YP_003682577.1	InterPro IPR001647:IPR012287:IPR011075:IPR009057; KEGG: sro:Sros_7526  TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YPH5 transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003682578.1	COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030:IPR016040; KEGG: sro:Sros_5449 nucleotide-diphosphate-sugar epimerase; PFAM: NmrA family protein; SPTR: C1YPH4 Predicted nucleoside-diphosphate sugar epimerase; PFAM: NmrA-like family
YP_003682579.1	InterProIPR001647:IPR004111:IPR012287:IPR011075:IPR 009057; KEGG: sen:SACE_3407 TetR family transcriptional regulator; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; SPTR: C1YPH3 transcriptional regulator, tetR family; PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family
YP_003682580.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR001789:IPR000792:IPR011991:IPR011006:IPR 016032; KEGG: sgr:SGR_5695  two-component system response regulator; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; SPTR: C1YPH2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003682581.1	COGs: COG2124 cytochrome P450; InterPro IPR017972:IPR001128:IPR002397:IPR017973; KEGG: sro:Sros_6255  cytochrome P450; PFAM: cytochrome P450; SPTR: C1YPH1 cytochrome P450; PFAM: cytochrome P450
YP_003682582.1	KEGG: sgr:SGR_1491 hypothetical protein; SPTR: C1YPH0  uncharacterized protein
YP_003682583.1	KEGG: rxy:Rxyl_2678 hypothetical protein; SPTR: C1YPG9 Predicted O-methyltransferase, COG4122
YP_003682584.1	COGs: COG1132 ABC-type multidrug transporter ATPase and permeases; InterProIPR017940:IPR003439:IPR017871:IPR003593:IPR 011527:IPR001140; KEGG: sen:SACE_6384 ABC transporter protein, ATP-binding component; PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; SPTR: C1YPG8 ABC-type multidrug transporter ATPase and permease; PFAM: ABC transporter transmembrane protein; ABC transporter
YP_003682585.1	InterPro IPR020434:IPR007822:IPR020429; KEGG: hoh:Hoch_4144 lanthionine synthetase C family protein; PFAM: Lanthionine synthetase C family protein; SPTR: C1YPG7 Lanthionine synthetase C-like protein; PFAM: Lanthionine synthetase C-like protein
YP_003682586.1	InterPro IPR006826:IPR006827; KEGG: hoh:Hoch_0066 lantibiotic dehydratase domain protein; PFAM: Lantibiotic dehydratase domain protein; SPTR: C1YPG6 Lantibiotic dehydratase; PFAM: Lantibiotic dehydratase, N terminus; Lantibiotic dehydratase, C terminus
YP_003682587.1	COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048; KEGG: bte:BTH_II1217 luciferase family protein; PFAM: Luciferase-like, subgroup; SPTR: C1YPG5 Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like monooxygenase
YP_003682588.1	KEGG: hypothetical protein; SPTR: C1YPG4  uncharacterized protein
YP_003682589.1	COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR015424:IPR015422:IPR000653:IPR015421; KEGG: saq:Sare_1264 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: C1YPG3 Predicted PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_003682590.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683:IPR004104; KEGG: stp:Strop_2218 oxidoreductase domain-containing protein; PFAM: oxidoreductase domain protein; oxidoreductase domain; SPTR: C1YPG2 Predicted dehydrogenase; PFAM: oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase family, C-terminal alpha/beta domain
YP_003682591.1	COGs: COG1819 glycosyl transferase related to UDP-glucuronosyltransferase; InterPro IPR010610:IPR004276:IPR002213; KEGG: sen:SACE_0726 glycosyl transferase, NDP-D-desosamine: 3-L-mycarosyl erythronolide B; PFAM: protein of unknown function DUF1205; glycosyl transferase family 28; UDP-glucuronosyl/UDP-glucosyltransferase; SPTR: C1YPG1 glycosyl transferase, UDP-glucuronosyltransferase; PFAM: glycosyltransferase family 28 N-terminal domain; protein of unknown function (DUF1205)
YP_003682592.1	COGs: COG1819 glycosyl transferase related to UDP-glucuronosyltransferase; InterPro IPR004276:IPR010610; KEGG: sen:SACE_0719 6-DEB TDP-mycarosyl glycosyltransferase; PFAM: protein of unknown function DUF1205; glycosyl transferase family 28; SPTR: C1YPG0 glycosyl transferase, UDP-glucuronosyltransferase; PFAM: glycosyltransferase family 28 C-terminal domain; glycosyltransferase family 28 N-terminal domain; protein of unknown function (DUF1205)
YP_003682593.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: svi:Svir_29680 ABC-type multidrug transporter ATPase component; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YPF9 ABC-type multidrug transporter ATPase component; PFAM: ABC transporter
YP_003682594.1	COGs: COG0842 ABC-type multidrug transporter permease; InterPro IPR013525; KEGG: svi:Svir_29670 ABC-type multidrug transporter permease; PFAM: ABC transporter; SPTR: C1YPF8 ABC-type multidrug transporter permease; PFAM: ABC-2 type transporter
YP_003682595.1	COGs: COG0842 ABC-type multidrug transporter permease; InterPro IPR000412:IPR013525; KEGG: svi:Svir_29660 ABC-type multidrug transporter permease; PFAM: ABC-2 type transporter; SPTR: C1YPF7 ABC-type multidrug transporter permease component; PFAM: ABC transporter
YP_003682596.1	SPTR: C1YPF6  uncharacterized protein
YP_003682597.1	InterPro IPR016181; KEGG: bbt:BBta_3804 hypothetical protein; SPTR: C1YPF5  uncharacterized protein
YP_003682598.1	InterPro IPR009081; KEGG: afo:Afer_1088 acyl carrier protein; SPTR: C1YPF4  uncharacterized protein
YP_003682599.1	COGs: COG1819 glycosyl transferase related to UDP-glucuronosyltransferase; InterPro IPR010610:IPR004276; KEGG: sen:SACE_0726 glycosyl transferase, NDP-D-desosamine: 3-L-mycarosyl erythronolide B; PFAM: protein of unknown function DUF1205; glycosyl transferase family 28; SPTR: C1YPF3 glycosyl transferase, UDP-glucuronosyltransferase; PFAM: glycosyltransferase family 28 N-terminal domain; protein of unknown function (DUF1205)
YP_003682600.1	InterPro IPR005212; KEGG: tcu:Tcur_2760 NDP-hexose 23-dehydratase; PFAM: NDP-hexose 23-dehydratase; SPTR: C1YPF2 NDP-hexose 2,3-dehydratase; PFAM: NDP-hexose 2,3-dehydratase
YP_003682601.1	COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR015424:IPR015422:IPR000653:IPR015421; KEGG: svi:Svir_29860 predicted PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: glutamine--scyllo-inositol transaminase; SPTR: C1YPF1 Predicted PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_003682602.1	InterPro IPR016160; KEGG: fal:FRAAL4627 hypothetical protein; SPTR: C1YPF0  uncharacterized protein
YP_003682603.1	COGs: COG1819 glycosyl transferase related to UDP-glucuronosyltransferase; InterPro IPR004276:IPR010610; KEGG: sen:SACE_0726 glycosyl transferase, NDP-D-desosamine: 3-L-mycarosyl erythronolide B; PFAM: protein of unknown function DUF1205; glycosyl transferase family 28; SPTR: C1YPE8 glycosyl transferase, UDP-glucuronosyltransferase; PFAM: glycosyltransferase family 28 N-terminal domain; protein of unknown function (DUF1205); TIGRFAM: glycosyltransferase, MGT family
YP_003682604.1	InterPro IPR013630:IPR013217:IPR013691; KEGG: svi:Svir_29890 methyltransferase family protein; PFAM: C-methyltransferase; methyltransferase domain protein; methyltransferase type 12; SPTR: C1YPE7 methyltransferase family protein; PFAM: C-methyltransferase; methyltransferase domain; Hypothetical methyltransferase
YP_003682605.1	COGs: COG0451 nucleoside-diphosphate-sugar epimerase; InterPro IPR008089:IPR016040:IPR001509; KEGG: saq:Sare_2116 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YPE6 nucleoside-diphosphate-sugar epimerase; PFAM: NAD dependent epimerase/dehydratase family
YP_003682606.1	COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterProIPR016040:IPR017476:IPR014027:IPR014026:IPR 001732:IPR008927; KEGG: saq:Sare_2117 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase ; UDP-glucose/GDP-mannose dehydrogenase dimerisation; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: C1YPE5 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_003682607.1	COGs: COG1819 glycosyl transferase related to UDP-glucuronosyltransferase; InterPro IPR004276:IPR010610; KEGG: sen:SACE_0719 6-DEB TDP-mycarosyl glycosyltransferase; PFAM: protein of unknown function DUF1205; glycosyl transferase family 28; SPTR: C1YPE4 glycosyl transferase, UDP-glucuronosyltransferase; PFAM: glycosyltransferase family 28 N-terminal domain; protein of unknown function (DUF1205)
YP_003682608.1	COGs: COG1819 glycosyl transferase related to UDP-glucuronosyltransferase; InterPro IPR004276:IPR010610:IPR007235; KEGG: sen:SACE_0726 glycosyl transferase, NDP-D-desosamine: 3-L-mycarosyl erythronolide B; PFAM: protein of unknown function DUF1205; glycosyl transferase family 28; glycosyltransferase 28 domain; SPTR: C1YPE3 glycosyl transferase, UDP-glucuronosyltransferase; PFAM: glycosyltransferase family 28 N-terminal domain; protein of unknown function (DUF1205)
YP_003682609.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: sma:SAV_952 dTDP-4-keto-6-deoxy-L-hexose 2,3-reductase; PFAM: aldo/keto reductase; SPTR: C1YPE2 Predicted oxidoreductase similar to aryl-alcohol dehydrogenase; PFAM: Aldo/keto reductase family
YP_003682610.1	InterPro IPR009081; KEGG: pag:PLES_25801 PltL; SPTR: C1YPE1  uncharacterized protein
YP_003682611.1	COGs: COG0318 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR010071:IPR020845; KEGG: mxa:MXAN_4305 amino acid adenyltransferase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YPE0 amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation protein; PFAM: AMP-binding enzyme; TIGRFAM: amino acid adenylation domain
YP_003682612.1	COGs: COG1960 acyl-CoA dehydrogenase; InterProIPR013786:IPR006091:IPR013764:IPR009100:IPR 009075:IPR006092:IPR006090; KEGG: pag:PLES_25861  acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: C1YPD9 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase, C-terminal domain; acyl-CoA dehydrogenase, middle domain; acyl-CoA dehydrogenase, N-terminal domain
YP_003682613.1	COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR016038:IPR016039:IPR013747; KEGG: sen:SACE_5307 3-oxoacyl-ACP synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; SPTR: C1YPD8 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YP_003682614.1	COGs: COG2986 histidine ammonia-lyase; InterPro IPR008948:IPR001106; KEGG: ami:Amir_4353 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; PRIAM: histidine ammonia-lyase; SPTR: C1YPD7 histidine ammonia-lyase; PFAM: phenylalanine and histidine ammonia-lyase
YP_003682615.1	COGs: COG0318 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; KEGG: ppw:PputW619_2685 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein; SPTR: C1YPD6  uncharacterized protein; PFAM: AMP-binding enzyme
YP_003682616.1	COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR016040:IPR005888:IPR001509; KEGG: svi:Svir_06090 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YPD5 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase
YP_003682617.1	COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005835:IPR005907; KEGG: tcu:Tcur_2763 glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase; SPTR: C1YPD4 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form
YP_003682618.1	COGs: COG1819 glycosyl transferase related to UDP-glucuronosyltransferase; InterPro IPR004276:IPR010610; KEGG: sen:SACE_0719 6-DEB TDP-mycarosyl glycosyltransferase; PFAM: protein of unknown function DUF1205; glycosyl transferase family 28; SPTR: C1YPD3  uncharacterized protein; PFAM: glycosyltransferase family 28 N-terminal domain; protein of unknown function (DUF1205)
YP_003682619.1	COGs: COG1819 glycosyl transferase related to UDP-glucuronosyltransferase; InterPro IPR010610:IPR004276; KEGG: sen:SACE_0726 glycosyl transferase, NDP-D-desosamine: 3-L-mycarosyl erythronolide B; PFAM: protein of unknown function DUF1205; glycosyl transferase family 28; SPTR: C1YPD2 glycosyl transferase, UDP-glucuronosyltransferase; PFAM: glycosyltransferase family 28 C-terminal domain; glycosyltransferase family 28 N-terminal domain; protein of unknown function (DUF1205)
YP_003682620.1	InterPro IPR016181; KEGG: fal:FRAAL6538 hypothetical protein; SPTR: C1YPD1  uncharacterized protein
YP_003682621.1	SPTR: C1YPD0  uncharacterized protein
YP_003682622.1	InterPro IPR016181; KEGG: fal:FRAAL6538 hypothetical protein; SPTR: C1YPC9  uncharacterized protein
YP_003682623.1	COGs: COG0515 serine/threonine protein kinase; InterProIPR007822:IPR011009:IPR020429:IPR002575:IPR 000719; KEGG: sen:SACE_4230 serine/threonine protein kinase; PFAM: Lanthionine synthetase C family protein; aminoglycoside phosphotransferase; SPTR: C1YPC8 phosphotransferase family protein/lanthionine synthetase C-like protein; PFAM: protein kinase domain
YP_003682624.1	InterPro IPR013216; KEGG: sen:SACE_0718 TDP-desosamine-N-dimethyltransferase; PFAM: methyltransferase type 11; SPTR: C1YPC7 methyltransferase family protein; PFAM: methyltransferase domain
YP_003682625.1	KEGG: sma:SAV_3476 hypothetical protein; SPTR: C1YPC6  uncharacterized protein
YP_003682626.1	COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR003593:IPR003439:IPR005894:IPR017871; KEGG: tcu:Tcur_2408 daunorubicin resistance ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: C1YPC5 Daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase; PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit
YP_003682627.1	InterPro IPR016181; KEGG: cbc:CbuK_0332 spermidine N1-acetyltransferase; SPTR: C1YPC4  uncharacterized protein
YP_003682628.1	SPTR: C1YPC3  uncharacterized protein
YP_003682629.1	SPTR: C1YPC2  uncharacterized protein
YP_003682630.1	InterPro IPR016181; KEGG: fal:FRAAL6538 hypothetical protein; SPTR: C1YPC1  uncharacterized protein
YP_003682631.1	InterPro IPR013526:IPR000412:IPR013525; KEGG: tcu:Tcur_2407 ABC transporter; PFAM: ABC transporter; SPTR: C1YPC0 ABC-type multidrug transporter permease; PFAM: ABC-2 type transporter; TIGRFAM: daunorubicin resistance ABC transporter membrane protein
YP_003682632.1	COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887:IPR013785; KEGG: tcu:Tcur_1744 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; PRIAM: 2-dehydro-3-deoxy-phosphogluconate aldolase; SPTR: C1YPB9 2-keto-3-deoxy-phosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase
YP_003682633.1	COGs: COG0129 dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR000581:IPR020558:IPR004786; KEGG: fre:Franean1_7067 phosphogluconate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: phosphogluconate dehydratase; SPTR: C1YPB8 6-phosphogluconate dehydratase; TIGRFAM: 6-phosphogluconate dehydratase; PFAM: Dehydratase family; TIGRFAM: 6-phosphogluconate dehydratase
YP_003682634.1	COGs: COG0364 glucose-6-phosphate 1-dehydrogenase; InterPro IPR001282:IPR016040:IPR019796; KEGG: sro:Sros_3374 glucose-6-phosphate dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; PRIAM: glucose-6-phosphate dehydrogenase; SPTR: C1YPB7 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase, C-terminal domain; glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase
YP_003682635.1	COGs: COG1940 transcriptional regulator/sugar kinase; InterPro IPR019885:IPR000600; KEGG: sro:Sros_3375 ROK family protein; PFAM: ROK family protein; SPTR: C1YPB6 transcriptional regulator/sugar kinase; PFAM: ROK family
YP_003682636.1	KEGG: tfu:Tfu_2969 hypothetical protein; SPTR: C1YPB5  uncharacterized protein
YP_003682637.1	COGs: COG1316 transcriptional regulator; InterPro IPR004474; KEGG: tfu:Tfu_2956 cell envelope-related transcriptional attenuator; PFAM: cell envelope-related transcriptional attenuator; SPTR: C1YPB4 cell envelope-related function transcriptional attenuator common domain; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain
YP_003682638.1	KEGG: bmj:BMULJ_04389 outer membrane autotransporter barrel; SPTR: C1YPB3  uncharacterized protein
YP_003682639.1	KEGG: bfa:Bfae_31870 hypothetical protein; SPTR: C1YPB2  uncharacterized protein
YP_003682640.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792:IPR001789:IPR011991:IPR011006; KEGG: tfu:Tfu_2950 LuxR response regulator receiver; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YPA9 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003682641.1	COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR000120:IPR020556; KEGG: sen:SACE_3773  amidase; PFAM: amidase; SPTR: C1YPA8 amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit alpha; PFAM: amidase
YP_003682642.1	COGs: COG0111 phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR016040:IPR006139:IPR006140; KEGG: sen:SACE_3772  D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: C1YPA7 phosphoglycerate dehydrogenase-like oxidoreductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_003682643.1	KEGG: sen:SACE_3771 hypothetical protein; SPTR: C1YPA6  uncharacterized protein
YP_003682644.1	COGs: COG3473 Maleate cis-trans isomerase; InterPro IPR015942; KEGG: sen:SACE_3770 Asp/Glu racemase; PFAM: Asp/Glu/hydantoin racemase; SPTR: C1YPA5 Maleate cis-trans isomerase; PFAM: Asp/Glu/Hydantoin racemase
YP_003682645.1	COGs: COG3473 Maleate cis-trans isomerase; InterPro IPR015942; KEGG: sen:SACE_3769 decarboxylase; PFAM: Asp/Glu/hydantoin racemase; SPTR: C1YPA4 Maleate cis-trans isomerase; PFAM: Asp/Glu/Hydantoin racemase
YP_003682646.1	COGs: COG1802 transcriptional regulators; InterPro IPR011711:IPR000524:IPR011991; KEGG: sen:SACE_3768 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator; SPTR: C1YPA3 transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003682647.1	KEGG: vei:Veis_1411 hypothetical protein; SPTR: C1YPA2  uncharacterized protein
YP_003682648.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016162:IPR016161:IPR015590:IPR016160; KEGG: tfu:Tfu_2949 succinate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; PRIAM: succinate-semialdehyde dehydrogenase; SPTR: C1YPA1 succinate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase
YP_003682649.1	COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR015424:IPR005814:IPR015421; KEGG: sen:SACE_3766 4-aminobutyrate transaminase; PFAM: aminotransferase class-III; PRIAM: acetylornithine transaminase; SPTR: C1YPA0 aminotransferase; PFAM: aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type
YP_003682650.1	KEGG: tfu:Tfu_1269 hypothetical protein; SPTR: C1YP99  uncharacterized protein
YP_003682651.1	InterPro IPR006311; KEGG: sen:SACE_2070 glycosyl hydrolase (secreted protein); PRIAM: glucan endo-1,3-beta-D-glucosidase; SPTR: C1YP98  uncharacterized protein
YP_003682652.1	InterPro IPR008985; KEGG: sro:Sros_9095 hypothetical protein; SPTR: C1YP97  uncharacterized protein; PFAM: glycosyl hydrolases family 16
YP_003682653.1	KEGG: svi:Svir_03420 hypothetical protein; SPTR: C1YP96  uncharacterized protein
YP_003682654.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR016166:IPR007173:IPR006094; KEGG: cai:Caci_1977 FAD linked oxidase domain protein; PFAM: FAD linked oxidase; D-arabinono-14-lactone oxidase; SPTR: C1YP95 FAD/FMN-dependent dehydrogenase; PFAM: D-arabinono-1,4-lactone oxidase; FAD binding domain
YP_003682655.1	InterPro IPR015943:IPR011048; KEGG: tgr:Tgr7_0276 alkaline phosphatase; SPTR: C1YP94  uncharacterized protein
YP_003682656.1	KEGG: tfu:Tfu_2869 hypothetical protein; SPTR: C1YP93  uncharacterized protein
YP_003682657.1	KEGG: tcu:Tcur_4528 hypothetical protein; SPTR: C1YP92  uncharacterized protein
YP_003682658.1	InterPro IPR002477:IPR005490; KEGG: fre:Franean1_1939 peptidoglycan binding domain-containing protein; PFAM: peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; SPTR: C1YP90  peptidoglycan-binding domain-containing protein; PFAM:  peptidoglycan binding domain; L,D-transpeptidase catalytic domain
YP_003682659.1	InterPro IPR002912; KEGG: sma:SAV_7063 hypothetical protein; PFAM: amino acid-binding ACT domain protein; SPTR: C1YP89 ACT domain-containing protein; PFAM: ACT domain
YP_003682660.1	KEGG: sro:Sros_8031 hypothetical protein; SPTR: C1YP88  uncharacterized protein
YP_003682661.1	KEGG: nfa:nfa23360 hypothetical protein; SPTR: C1YP87  uncharacterized protein
YP_003682662.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013325:IPR013324:IPR007627:IPR013249:IPR 014284; KEGG: nfa:nfa23350  sigma factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: C1YP86 RNA polymerase, sigma subunit, ECF family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003682663.1	KEGG: similar to kinase D-interacting substrate 220; SPTR: C1YP85  uncharacterized protein
YP_003682664.1	COGs: COG1302 conserved hypothetical protein; InterPro IPR005531; KEGG: nfa:nfa23390 hypothetical protein; PFAM: protein of unknown function DUF322; SPTR: C1YP84 Uncharacterized conserved protein; PFAM: protein of unknown function (DUF322)
YP_003682665.1	KEGG: sro:Sros_8029 hypothetical protein; SPTR: C1YP83  uncharacterized protein
YP_003682666.1	KEGG: nml:Namu_4997 hypothetical protein; SPTR: C1YP82  uncharacterized protein; PFAM: protein of unknown function (DUF322)
YP_003682667.1	KEGG: sro:Sros_8031 hypothetical protein; SPTR: C1YP81  uncharacterized protein
YP_003682668.1	KEGG: nml:Namu_4999 hypothetical protein; SPTR: C1YP80  uncharacterized protein
YP_003682669.1	COGs: COG4587 ABC-type uncharacterized transporter permease; InterPro IPR010390; KEGG: cai:Caci_2387 protein of unknown function DUF990; PFAM: protein of unknown function DUF990; SPTR: C1YP79 ABC-type uncharacterized transporter permease; PFAM: protein of unknown function (DUF990)
YP_003682670.1	COGs: COG3694 ABC-type uncharacterized transporter permease; InterPro IPR010390; KEGG: tcu:Tcur_2492 protein of unknown function DUF990; PFAM: protein of unknown function DUF990; SPTR: C1YP78 ABC-type uncharacterized transporter permease; PFAM: protein of unknown function (DUF990)
YP_003682671.1	COGs: COG4586 ABC-type uncharacterized transporter ATPase component; InterPro IPR003593:IPR003439; KEGG: tcu:Tcur_2493 ABC transporter related protein; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YP77 ABC-type uncharacterized transporter ATPase component; PFAM: ABC transporter
YP_003682672.1	KEGG: sma:SAV_1713 integral membrane protein; SPTR: C1YP76  uncharacterized protein; PFAM: protein of unknown function (DUF803)
YP_003682673.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR009082:IPR003660:IPR003594:IPR003661:IPR 005467:IPR004358; KEGG: tfu:Tfu_1940 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: C1YP75 Sensor protein; PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003682674.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001867:IPR001789:IPR011991:IPR011006; KEGG: cai:Caci_1627 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver; transcriptional regulator; SPTR: C1YP74 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal
YP_003682675.1	KEGG: sro:Sros_0305 hypothetical protein; SPTR: C1YP73  uncharacterized protein
YP_003682676.1	InterPro IPR002477; KEGG: sro:Sros_0306 hypothetical protein; PFAM: peptidoglycan-binding protein; SPTR: C1YP72  peptidoglycan binding protein; PFAM:  peptidoglycan binding domain
YP_003682677.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: sro:Sros_0307 hypothetical protein; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: C1YP71 ABC-type antimicrobial peptide transporter ATPase component; PFAM: ABC transporter
YP_003682678.1	COGs: COG0577 ABC-type antimicrobial peptide transport system permease; InterPro IPR003838; KEGG: sro:Sros_0308 ABC transporter related protein; PFAM: protein of unknown function DUF214; SPTR: C1YP70 ABC-type antimicrobial peptide transporter permease component; PFAM: Predicted permease
YP_003682679.1	KEGG: tfu:Tfu_3081 hypothetical protein; SPTR: C1YP69  uncharacterized protein
YP_003682680.1	COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625:IPR005075; KEGG: tfu:Tfu_2870  integral membrane protein; PFAM: propeptide PepSY amd peptidase M4; PepSY-associated TM helix domain protein; SPTR: C1YP68 Uncharacterized iron-regulated membrane protein, COG3182
YP_003682681.1	InterPro IPR001412; KEGG: jde:Jden_2342 hypothetical protein; SPTR: C1YP67  uncharacterized protein
YP_003682682.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR009082:IPR003660:IPR003594:IPR003661:IPR 005467:IPR004358; KEGG: tfu:Tfu_1329 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: C1YP66 Sensor protein; PFAM: HAMP domain; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: heavy metal sensor kinase
YP_003682683.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterProIPR001789:IPR011991:IPR011006:IPR001867:IPR 005829; KEGG: tfu:Tfu_1330 response regulator receiver; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver; SPTR: C1YP65 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; transcriptional regulatory protein, C terminal
YP_003682684.1	KEGG: tfu:Tfu_1331 hypothetical protein; SPTR: C1YP64  uncharacterized protein
YP_003682685.1	InterPro IPR018966; KEGG: tfu:Tfu_1332 hypothetical protein; PFAM: VTC domain; SPTR: C1YP63 VTC domain-containing protein; PFAM: VTC domain
YP_003682686.1	KEGG: aoe:Clos_0772 phosphotransferase (aminonucleoside antibiotic resistance); SPTR: C1YP62  uncharacterized protein; PFAM: chloramphenicol phosphotransferase-like protein
YP_003682687.1	COGs: COG1680 beta-lactamase class C and other penicillin binding protein; InterPro IPR012338:IPR001466:IPR017909:IPR006311; KEGG: sro:Sros_6028 beta-lactamase; PFAM: beta-lactamase; SPTR: C1YP61 Penicillin-binding protein, beta-lactamase class C; PFAM: beta-lactamase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003682688.1	KEGG: tbd:Tbd_0766 hypotheticalprotein; SPTR: C1YP60  uncharacterized protein
YP_003682689.1	KEGG: scl:sce8416 hypothetical protein; SPTR: C1YP59  uncharacterized protein
YP_003682690.1	COGs: COG2217 Cation transport ATPase; InterProIPR006403:IPR001757:IPR008250:IPR006416:IPR 005834:IPR018303; KEGG: rha:RHA1_ro03539 copper-exporting ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: C1YP58 Copper/silver-translocating P-type ATPase; TIGRFAM: copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; ATPase P; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; ATPase P; ATPase P
YP_003682691.1	InterPro IPR019587; KEGG: scl:sce1328 hypothetical protein; PFAM: polyketide cyclase/dehydrase; SPTR: C1YP56 Uncharacterized conserved protein; PFAM: polyketide cyclase / dehydrase and lipid transport
YP_003682692.1	InterPro IPR000326; KEGG: tfu:Tfu_3047 phosphoesterase, PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SPTR: C1YP55 PAP2 superfamily protein; PFAM: PAP2 superfamily
YP_003682693.1	COGs: COG1802 transcriptional regulators; InterPro IPR011711:IPR000524:IPR011991; KEGG: tfu:Tfu_3048 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH; SPTR: C1YP54 transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_003682694.1	COGs: COG1071 pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type subunit alpha; InterPro IPR001017:IPR017597; KEGG: tfu:Tfu_3049 pyruvate dehydrogenase (lipoamide); PFAM: dehydrogenase E1 component; PRIAM: pyruvate dehydrogenase (acetyl-transferring); SPTR: C1YP53 pyruvate dehydrogenase E1 component, alpha subunit; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; PFAM: dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, subunit alpha
YP_003682695.1	COGs: COG0022 pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type subunit beta; InterPro IPR015941:IPR009014:IPR005475:IPR005476; KEGG: tfu:Tfu_3050 dehydrogenase complex, E1 component subunit beta; PFAM: transketolase; transketolase; SPTR: C1YP52 pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component subunit beta; PFAM: transketolase, C-terminal domain; transketolase, pyrimidine binding domain
YP_003682696.1	COGs: COG0508 pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR004167:IPR001078:IPR000089:IPR011053; KEGG: tfu:Tfu_3051 pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; biotin/lipoyl attachment domain-containing protein; SPTR: C1YP51 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form
YP_003682697.1	KEGG: tfu:Tfu_1352 hypothetical protein; SPTR: C1YP50  uncharacterized protein
YP_003682698.1	COGs: COG3542 conserved hypothetical protein; InterPro IPR014710:IPR009297:IPR009327; KEGG: sen:SACE_1943 hypothetical protein; PFAM: protein of unknown function DUF985; protein of unknown function DUF952; SPTR: C1YP49 Uncharacterized conserved protein; PFAM: Cupin superfamily (DUF985); protein of unknown function (DUF952)
YP_003682699.1	KEGG: sen:SACE_0159 endonuclease III-like protein; SPTR: C1YP48  uncharacterized protein
YP_003682700.1	KEGG: tfu:Tfu_0032 hypothetical protein; SPTR: C1YP47  uncharacterized protein
YP_003682701.1	COGs: COG2188 transcriptional regulators; InterPro IPR000524:IPR011991:IPR011663; KEGG: tfu:Tfu_0033 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C1YP46 transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_003682702.1	COGs: COG0136 aspartate-semialdehyde dehydrogenase; InterProIPR005986:IPR016040:IPR000534:IPR012280:IPR 012080; KEGG: tfu:Tfu_0042 aspartate semialdehyde dehydrogenase; PFAM: semialdehyde dehydrogenase dimerisation region; semialdehyde dehydrogenase NAD - binding; PRIAM: aspartate-semialdehyde dehydrogenase; SMART: semialdehyde dehydrogenase NAD - binding; SPTR: C1YRE9 aspartate semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: semialdehyde dehydrogenase, dimerisation domain; semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)
YP_003682703.1	COGs: COG0527 Aspartokinase; InterProIPR001048:IPR002912:IPR005260:IPR001341:IPR 018042; KEGG: tfu:Tfu_0043 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; SPTR: C1YRE8 Aspartokinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase
YP_003682704.1	COGs: COG0353 recombinational DNA repair protein (RecF pathway); InterProIPR003583:IPR000093:IPR015967:IPR006171:IPR 006154; KEGG: sro:Sros_9313 recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; SMART: Toprim sub domain protein; Helix-hairpin-helix DNA-binding class 1; SPTR: C1YRE7 DNA replication and repair protein RecR; TIGRFAM: recombination protein RecR; PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR
YP_003682705.1	COGs: COG0718 conserved hypothetical protein; InterPro IPR004401; KEGG: tfu:Tfu_0045 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C1YRE6  uncharacterized protein; PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: conserved hypothetical protein TIGR00103
YP_003682706.1	COGs: COG2518 protein-L-isoaspartate carboxylmethyltransferase; InterPro IPR000682; KEGG: tcu:Tcur_3764 protein-L-isoaspartate(D-aspartate)O-methyltrans ferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: C1YRE5 protein-L-isoaspartate carboxylmethyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_003682707.1	KEGG: sgr:SGR_5022 hypothetical protein; SPTR: C1YRE4  uncharacterized protein
YP_003682708.1	InterPro IPR001647:IPR012287:IPR011075:IPR009057; KEGG: nfa:nfa24030  transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YRE3 TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family
YP_003682709.1	COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR003593:IPR008921:IPR003959:IPR012763; KEGG: tfu:Tfu_0051 DNA polymerase III subunits gamma and tau; PFAM: ATPase AAA central domain protein; PRIAM: DNA-directed DNA polymerase; SMART: ATPase AAA; SPTR: C1YRE2 DNA polymerase III, subunit gamma/tau; TIGRFAM: DNA polymerase III subunits gamma and tau; PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunits gamma and tau
YP_003682710.1	COGs: COG4320 conserved hypothetical protein; InterPro IPR018721; KEGG: mmc:Mmcs_1350 hypothetical protein; PFAM: protein of unknown function DUF2252; SPTR: C1YRE1 Uncharacterized conserved protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2252)
YP_003682711.1	COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterProIPR004792:IPR016040:IPR013027:IPR001155:IPR 013785:IPR001327; KEGG: sco:SCO7066 2,4-dienoyl-CoA reductase (NADPH); PFAM: NADH:flavin oxidoreductase/NADH oxidase; HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: C1YRD9 2,4-dienoyl-CoA reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family
YP_003682712.1	COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941; KEGG: tfu:Tfu_0895 hypothetical protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: C1YRD8 Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase; PFAM: Predicted membrane protein (DUF2231); Rieske [2Fe-2S] domain
YP_003682713.1	COGs: COG1695 transcriptional regulator protein; InterPro IPR018309:IPR005149:IPR011991; KEGG: sgr:SGR_826 PadR-like family transcriptional regulator; PFAM: transcriptional regulator PadR-like; transcriptional regulator PadR family protein; SPTR: C1YRD7 transcriptional regulator, PadR family; PFAM: transcriptional regulator PadR-like family; virulence activator alpha C-term
YP_003682714.1	COGs: COG1940 transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: ami:Amir_6189 ROK family protein; PFAM: ROK family protein; SPTR: C1YRD6 transcriptional regulator/sugar kinase; PFAM: ROK family
YP_003682715.1	COGs: COG3345 alpha-galactosidase; InterPro IPR002252:IPR013785:IPR017853:IPR000111; KEGG: ami:Amir_6181 glycoside hydrolase clan GH-D; PFAM: glycoside hydrolase clan GH-D; SPTR: C1YRD5 alpha-galactosidase; PFAM: Melibiase
YP_003682716.1	COGs: COG3250 beta-galactosidase/beta-glucuronidase; InterProIPR008979:IPR006104:IPR006102:IPR013781:IPR 017853; KEGG: ami:Amir_6180 beta-mannosidase protein; PFAM: glycoside hydrolase family 2 sugar binding; PRIAM: beta-mannosidase; SPTR: C1YRD4 beta-mannosidase; PFAM: domain; glycosyl hydrolases family 2, sugar binding domain
YP_003682717.1	COGs: COG1609 transcriptional regulators; InterPro IPR001761; KEGG: ami:Amir_6179 periplasmic binding protein/LacI transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: C1YRD3 transcriptional regulator, LacI family; PFAM: family
YP_003682718.1	COGs: COG0590 cytosine/adenosine deaminase; InterPro IPR016193:IPR002125; KEGG: tfu:Tfu_0027 tRNA-adenosine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: C1YRD2 tRNA-adenosine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_003682719.1	KEGG: tfu:Tfu_0026 hypothetical protein; SPTR: C1YRD1  uncharacterized protein
YP_003682720.1	KEGG: tfu:Tfu_0025 hypothetical protein; SPTR: C1YRD0  uncharacterized protein
YP_003682721.1	COGs: COG0035 uracil phosphoribosyltransferase; InterPro IPR000836:IPR005765; KEGG: nca:Noca_0275 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: uracil phosphoribosyltransferase; SPTR: C1YRC9 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase
YP_003682722.1	KEGG: tfu:Tfu_0022 hypothetical protein; SPTR: C1YRC8  uncharacterized protein
YP_003682723.1	KEGG: tfu:Tfu_0021 hypothetical protein; SPTR: C1YRC7  uncharacterized protein
YP_003682724.1	InterPro IPR005182; KEGG: tfu:Tfu_0020 hypothetical protein; PFAM: membrane-flanked domain; SPTR: Q47U04  uncharacterized protein; PFAM: Bacterial membrane flanked domain
YP_003682725.1	KEGG: wpi:WPa_0386 glycoside hydrolase, family 25; SPTR: C1YRC5  uncharacterized protein
YP_003682726.1	COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR017871:IPR003593:IPR003439; KEGG: sro:Sros_4107 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C1YRC4 ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter
YP_003682727.1	COGs: COG0305 Replicative DNA helicase; InterProIPR003587:IPR006142:IPR016136:IPR007693:IPR 007694:IPR004042:IPR007692:IPR006141:IPR016160; KEGG: mpa:MAP0071 hypothetical protein; PFAM: DnaB domain protein helicase; SMART: Hedgehog/intein hint domain protein; SPTR: C1YRC3 Primary replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB-like helicase N terminal domain; Homing endonuclease; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; intein C-terminal splicing region
YP_003682728.1	COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: tfu:Tfu_3091 multi anti extrusion protein MatE; PFAM: multi antimicrobial extrusion protein MatE; SPTR: C1YRC2  efflux protein, MATE family; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM:  efflux protein, MATE family
YP_003682729.1	InterPro IPR006619:IPR002502:IPR017909:IPR006311; KEGG: tcu:Tcur_4945 N-acetylmuramoyl-L-alanine amidase family 2; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: Animal peptidoglycan recognition protein PGRP; N-acetylmuramoyl-L-alanine amidase family 2; SPTR: C1YRC1 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase
YP_003682730.1	COGs: COG0359 ribosomal protein L9; InterPro IPR020070:IPR020069:IPR009027:IPR020594; KEGG: tfu:Tfu_3092 50S ribosomal protein L9; PFAM: ribosomal protein L9-like; SPTR: C1YRC0 50S ribosomal protein L9P; TIGRFAM: ribosomal protein L9; PFAM: ribosomal protein L9, N-terminal domain; ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9
YP_003682731.1	COGs: COG0238 ribosomal protein S18; InterPro IPR018275:IPR001648; KEGG: tfu:Tfu_3093 30S ribosomal protein S18; PFAM: ribosomal protein S18; SPTR: C1YRB9 30S ribosomal protein S18P; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; TIGRFAM: ribosomal protein S18
YP_003682732.1	COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424:IPR012340:IPR016027:IPR011344; KEGG: tfu:Tfu_3094 single-stranded DNA-binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: C1YRB8 Single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_003682733.1	COGs: COG0360 ribosomal protein S6; InterPro IPR000529:IPR020814:IPR014717; KEGG: tfu:Tfu_3095 30S ribosomal protein S6; PFAM: ribosomal protein S6, bacterial-like; SPTR: C1YRB7 30S ribosomal protein S6P; TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6; TIGRFAM: ribosomal protein S6
YP_003682734.1	COGs: COG0744 membrane carboxypeptidase (penicillin-binding protein); InterPro IPR012338:IPR001264:IPR001460; KEGG: tfu:Tfu_3097  penicillin-binding protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; SPTR: C1YRB6 membrane carboxypeptidase (Penicillin-binding protein); PFAM: Penicillin binding protein transpeptidase domain; transglycosylase
YP_003682735.1	COGs: COG1260 myo-inositol-1-phosphate synthase; InterPro IPR016040:IPR002587:IPR013021:IPR017815; KEGG: tfu:Tfu_3099 myo-inositol-1-phosphate synthase; PFAM: myo-inositol-1-phosphate synthase; myo-inositol-1-phosphate synthase GAPDH domain protein; SPTR: C1YRB5 inositol 1-phosphate synthase; TIGRFAM: inositol 1-phosphate synthase; PFAM: myo-inositol-1-phosphate synthase; TIGRFAM: inositol 1-phosphate synthase, Actinobacterial type
YP_003682736.1	InterPro IPR016196:IPR011701; KEGG: tfu:Tfu_3101 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YRB4 Major Facilitator Superfamily transporter; PFAM: Major Facilitator Superfamily
YP_003682737.1	COGs: COG2226 methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: rrs:RoseRS_1103 methyltransferase type 11; PFAM: methyltransferase type 11; SPTR: C1YRB3 methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: methyltransferase domain
YP_003682738.1	COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterProIPR003607:IPR002646:IPR006674:IPR014065:IPR 006675; KEGG: tfu:Tfu_3102 metal-dependent phosphohydrolase; PFAM: polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: C1YRB2 tRNA adenylyltransferase; TIGRFAM: tRNA adenylyltransferase; metal dependent phophohydrolase; PFAM: HD domain; poly A polymerase head domain; TIGRFAM: tRNA adenylyltransferase; uncharacterized domain HDIG
YP_003682739.1	KEGG: tfu:Tfu_3103 hypothetical protein; SPTR: C1YRB1  uncharacterized protein
YP_003682741.1	COGs: COG0728 membrane protein  virulence factor; InterPro IPR004268; KEGG: tfu:Tfu_3104 virulence factor MviN-like; PFAM: virulence factor MVIN family protein; SPTR: C1YRB0 integral membrane protein MviN; TIGRFAM: integral membrane protein MviN; PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN
YP_003682742.1	COGs: COG0728 membrane protein  virulence factor; InterPro IPR004268; KEGG: tfu:Tfu_3104 virulence factor MviN-like; PFAM: virulence factor MVIN family protein; SPTR: C1YRA9 integral membrane protein MviN; TIGRFAM: integral membrane protein MviN; PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN
YP_003682743.1	InterPro IPR008979:IPR000421:IPR011009; KEGG: tfu:Tfu_3105 hypothetical protein; PFAM: coagulation factor 5/8 type domain protein; SPTR: C1YRA8 F5/8 type C domain-containing protein; PFAM: F5/8 type C domain
YP_003682744.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013324:IPR013249:IPR013325:IPR007627:IPR 014284; KEGG: tfu:Tfu_3106 RNA polymerase sigma factor SigM; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: C1YRA7 RNA polymerase, sigma subunit, ECF family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003682745.1	KEGG: tfu:Tfu_3107 hypothetical protein; SPTR: C1YRA6  uncharacterized protein
YP_003682746.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR001789:IPR000792:IPR011991:IPR011006:IPR 016032; KEGG: nfa:nfa4180  two-component system response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YRA5 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003682747.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: bcv:Bcav_4003 histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YRA4 Signal transduction histidine kinase, COG4585; PFAM: histidine kinase; histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003682748.1	COGs: COG0492 thioredoxin reductase; InterPro IPR000103:IPR013027:IPR005982:IPR008255; KEGG: tfu:Tfu_3108 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: C1YRA2 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase
YP_003682749.1	COGs: COG3118 thioredoxin domain-containing protein; InterProIPR017936:IPR017937:IPR012336:IPR005746:IPR 006662:IPR013766:IPR012335; KEGG: tfu:Tfu_3109 thioredoxin; PFAM: thioredoxin domain; SPTR: C1YRA1 thioredoxin; TIGRFAM: thioredoxin; PFAM: thioredoxin; TIGRFAM: thioredoxin
YP_003682750.1	COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: tfu:Tfu_3110 chromosome segregation DNA-binding protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: C1YRA0 chromosome segregation DNA-binding protein; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins
YP_003682751.1	COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: tfu:Tfu_3111 chromosome segregation ATPase; PFAM: cobyrinic acid ac-diamide synthase; SPTR: C1YR99 chromosome segregation ATPase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_003682752.1	COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; InterPro IPR003682; KEGG: tfu:Tfu_3112 16S rRNA methyltransferase GidB; PFAM: glucose inhibited division protein; SPTR: C1YR98 16S rRNA m(7)G-527 methyltransferase; TIGRFAM: methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA methyltransferase GidB
YP_003682753.1	COGs: COG1847 RNA-binding protein; InterPro IPR001374; KEGG: tcu:Tcur_4981 single-stranded nucleic acid binding R3H domain protein; PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; SPTR: C1YR97 Predicted RNA-binding protein; PFAM: R3H domain
YP_003682754.1	COGs: COG0706 Preprotein translocase subunit YidC; InterPro IPR001708:IPR020001; KEGG: tfu:Tfu_3114 hypothetical protein; PFAM: hypothetical protein; SPTR: C1YR96 Preprotein translocase subunit YidC; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain
YP_003682755.1	COGs: COG0759 conserved hypothetical protein; InterPro IPR002696; KEGG: tfu:Tfu_3115 hypothetical protein; PFAM: protein of unknown function DUF37; SPTR: C1YR95  uncharacterized protein; PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein TIGR00278
YP_003682756.1	KEGG: tfu:Tfu_3116 ribonuclease P protein; SPTR: Q47K73 ribonuclease P protein component
YP_003682757.1	InterPro IPR000271; KEGG: tfu:Tfu_3117 50S ribosomal protein L34; PFAM: ribosomal protein L34; SPTR: Q47K72 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type
YP_003682758.1	COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834; KEGG: afw:Anae109_1202 haloacid dehalogenase, type II; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: C1YJ31 Predicted HAD superfamily hydrolase, COG1011; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 2-haloalkanoic acid dehalogenase, type II
YP_003682759.1	COGs: COG1443 Isopentenyldiphosphate isomerase; InterPro IPR011876:IPR015797:IPR000086; KEGG: cmi:CMM_2889 isopentenyl-diphosphate delta-isomerase; PFAM: NUDIX hydrolase; PRIAM: Isopentenyl-diphosphate Delta-isomerase; SPTR: C1YJ30 Isopentenyl-diphosphate delta-isomerase; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; PFAM: NUDIX domain; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1
YP_003682760.1	InterPro IPR016040; KEGG: mva:Mvan_1920  short chain dehydrogenase; SPTR: C1YJ29  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003682761.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR000792:IPR001789:IPR011991:IPR011006:IPR 016032; KEGG: svi:Svir_39200 response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YJ28 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003682762.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: nml:Namu_0545 histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: C1YJ27 Signal transduction histidine kinase, COG4585; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003682763.1	COGs: COG2311 membrane protein; InterPro IPR007349; KEGG: smt:Smal_2885 protein of unknown function DUF405; PFAM: protein of unknown function DUF418; SPTR: C1YJ26 Predicted membrane protein, COG2311; PFAM: Protein of unknown function (DUF418)
YP_003682764.1	InterPro IPR012675:IPR016155:IPR003749; KEGG: sen:SACE_1648 thiamineS protein; PFAM: thiamineS protein; SPTR: C1YJ25 Molybdopterin synthase subunit MoaD; PFAM: ThiS family
YP_003682765.1	InterPro IPR002860; KEGG: sen:SACE_1647 hypothetical protein; PFAM: glycosyl hydrolase BNR repeat-containing protein; SPTR: C1YJ24  uncharacterized protein
YP_003682766.1	InterPro IPR001647:IPR009057:IPR012287; KEGG: fal:FRAAL2258 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YJ23 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003682767.1	KEGG: rop:ROP_48170 hypothetical protein; SPTR: C1YJ22  uncharacterized protein
YP_003682768.1	InterPro IPR018151:IPR001437; KEGG: msm:MSMEG_6292 transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; SPTR: C1YJ21 Transcription elongation factor; PFAM: Transcription elongation factor, GreA/GreB, C-term
YP_003682769.1	COGs: COG2508 Regulator of polyketide synthase expression; InterPro IPR002197; KEGG: sro:Sros_2432 transcriptional regulator, CdaR; PFAM: helix-turn-helix Fis-type; SPTR: C1YJ20 Bacterial regulatory protein, Fis family; PFAM: Bacterial regulatory protein, Fis family
YP_003682770.1	KEGG: hypothetical protein LOC714358; SPTR: C1YJ19  uncharacterized protein
YP_003682771.1	COGs: COG3284 Transcriptional activator of acetoin/glycerol metabolism; InterPro IPR001867:IPR003018; KEGG: sma:SAV_7178 transcriptional regulator; PFAM: transcriptional regulator domain protein; GAF domain protein; SMART: transcriptional regulator domain protein; SPTR: C1YJ18 Transcriptional activator of acetoin/glycerol metabolism
YP_003682772.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016161:IPR015590:IPR016160:IPR016162; KEGG: sen:SACE_2377 aldehyde dehydrogenase (NAD+); PFAM: Aldehyde Dehydrogenase; PRIAM: Aldehyde dehydrogenase (NAD(+)); SPTR: C1YJ17 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family
YP_003682773.1	COGs: COG3564 conserved hypothetical protein; InterPro IPR008497; KEGG: ami:Amir_1090 protein of unknown function DUF779; PFAM: protein of unknown function DUF779; SPTR: C1YJ16 Uncharacterized conserved protein; PFAM: Protein of unknown function (DUF779)
YP_003682774.1	InterPro IPR000551:IPR009061; KEGG: sco:SCO4688 hypothetical protein; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YJ15 MerR family regulatory protein; PFAM: MerR family regulatory protein
YP_003682775.1	KEGG: tfu:Tfu_1424 hypothetical protein; SPTR: C1YJ14  uncharacterized protein
YP_003682776.1	COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR008978:IPR002068; KEGG: mav:MAV_2721 18 kDa antigen 2; PFAM: heat shock protein Hsp20; SPTR: C1YJ13 Molecular chaperone (Small heat shock protein); PFAM: Hsp20/alpha crystallin family
YP_003682777.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR009061; KEGG: mav:MAV_2720 transcriptional regulator, MerR family protein; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YJ12 Predicted transcriptional regulator; PFAM: MerR family regulatory protein
YP_003682778.1	COGs: COG1320 Multisubunit Na+/H+ antiporter MnhG subunit; InterPro IPR005133; KEGG: tfu:Tfu_0345  monovalent cation/H+ antiporter subunit G; PFAM: Na+/H+ antiporter subunit; SPTR: C1YJ11 Monovalent cation/proton antiporter, MnhG/PhaG subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit
YP_003682779.1	InterPro IPR007208; KEGG: tfu:Tfu_0346  cation antiporter subunit; PFAM: multiple resistance and pH regulation protein F; SPTR: C1YJ10 Multisubunit Na+/H+ antiporter, MnhF subunit; PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF)
YP_003682780.1	COGs: COG1863 Multisubunit Na+/H+ antiporter MnhE subunit; InterPro IPR002758; KEGG: tfu:Tfu_0347  monovalent cation/H+ antiporter subunit E; PFAM: cation antiporter; SPTR: C1YJ09 Multisubunit Na+/H+ antiporter, MnhE subunit; PFAM: Na+/H+ ion antiporter subunit
YP_003682781.1	COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR003918:IPR001750; KEGG: tfu:Tfu_0348  monovalent cation/H+ antiporter subunit D; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: C1YJ08 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_003682782.1	COGs: COG1006 Multisubunit Na+/H+ antiporter MnhC subunit; InterPro IPR001133; KEGG: tfu:Tfu_0349  monovalent cation/H+ antiporter subunit C; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: C1YJ07 Multisubunit Na+/H+ antiporter, MnhC subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_003682783.1	COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR003916:IPR001516:IPR001750:IPR007182; KEGG: tfu:Tfu_0350  monovalent cation/H+ antiporter subunit A; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; Na+/H+ antiporter MnhB subunit-related protein; SPTR: C1YJ06 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; Domain related to MnhB subunit of Na+/H+ antiporter
YP_003682784.1	InterPro IPR000835:IPR011991; KEGG: tfu:Tfu_0351 helix-turn-helix, fis-type; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YJ05 Transcriptional regulator; PFAM: MarR family
YP_003682785.1	COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR018215:IPR001907; KEGG: kra:Krad_4258 endopeptidase Clp; PFAM: peptidase S14 ClpP; PRIAM: Endopeptidase Clp; SPTR: C1YJ04 ATP-dependent Clp protease proteolytic subunit; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_003682786.1	COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR001907:IPR018215; KEGG: rop:ROP_12310 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP; PRIAM: Endopeptidase Clp; SPTR: C1YJ03 ATP-dependent Clp protease proteolytic subunit; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_003682787.1	InterPro IPR001387:IPR010982; KEGG: sco:SCO7279 DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YJ02 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003682788.1	KEGG: mlu:Mlut_17350 signal transduction histidine kinase; SPTR: C1YJ01  uncharacterized protein
YP_003682789.1	KEGG: sro:Sros_6910 transglycosylase-associated protein; SPTR: C1YJ00  uncharacterized protein
YP_003682790.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683; KEGG: saq:Sare_4046 oxidoreductase domain-containing protein; PFAM: oxidoreductase domain protein; SPTR: C1YIZ9 Predicted dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_003682791.1	COGs: COG0153 Galactokinase; InterProIPR000705:IPR006206:IPR019741:IPR006203:IPR 020568:IPR014721:IPR019539:IPR006204:IPR013750; KEGG: svi:Svir_14320 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein; SPTR: C1YIZ8 Galactokinase; TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase
YP_003682792.1	COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR005886:IPR002198:IPR016040:IPR001509; KEGG: sen:SACE_1774 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YIZ7 UDP-galactose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase
YP_003682793.1	COGs: COG1085 Galactose-1-phosphate uridylyltransferase; InterProIPR001937:IPR005849:IPR011151:IPR011146:IPR 019779:IPR005850; KEGG: sro:Sros_7308 UDP-glucose--hexose-1-phosphateuridylyltransfera se; PFAM: galactose-1-phosphate uridyl transferase domain protein; PRIAM: UDP-glucose--hexose-1-phosphate uridylyltransferase; SPTR: C1YIZ6 Galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1
YP_003682794.1	COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR018356:IPR014036; KEGG: sro:Sros_7307 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: C1YIZ5 Transcriptional regulator, DeoR family; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_003682795.1	COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR017909:IPR006059; KEGG: rop:ROP_55650  ABC transporter substrate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: C1YIZ4 Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein
YP_003682796.1	COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: rop:ROP_55660  ABC transporter permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YIZ3 Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003682797.1	COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: rop:ROP_55670  ABC transporter permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YIZ2 Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003682798.1	COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: sma:SAV_61 IS200-like transposase; PFAM:  transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; SPTR: C1YIZ1 Transposase, IS605 OrfB family, central region; TIGRFAM: transposase, IS605 OrfB family; PFAM: Helix-turn-helix domain; transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region
YP_003682799.1	COGs: COG3345 Alpha-galactosidase; InterPro IPR000111:IPR002252:IPR013785:IPR017853; KEGG: kra:Krad_3471 glycoside hydrolase clan GH-D; PFAM: glycoside hydrolase clan GH-D; SPTR: C1YIZ0 Alpha-galactosidase; PFAM: Melibiase
YP_003682800.1	COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterProIPR006101:IPR017853:IPR011013:IPR008979:IPR 006102:IPR013781:IPR013812:IPR014718:IPR006104:IPR006103:I PR004199; KEGG: sma:SAV_2095 beta-galactosidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 42 domain 5 loop region; PRIAM: Beta-galactosidase; SPTR: C1YIY9 Beta-galactosidase/beta-glucuronidase; PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Beta galactosidase small chain; Glycosyl hydrolases family 2, sugar binding domain
YP_003682801.1	InterPro IPR013130; KEGG: svi:Svir_17080 ferric reductase like transmembrane component; PFAM: Ferric reductase domain protein transmembrane component domain; SPTR: C1YIY8 Ferric reductase like transmembrane component; PFAM: Ferric reductase like transmembrane component
YP_003682802.1	InterPro IPR008462; KEGG: sen:SACE_5557 CsbD-like protein; PFAM: CsbD family protein; SPTR: C1YIY7 CsbD-like protein; PFAM: CsbD-like
YP_003682803.1	COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR004399:IPR013749; KEGG: rer:RER_32350 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; SPTR: C1YIY6 Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase
YP_003682804.1	InterPro IPR001647:IPR012287:IPR011075:IPR009057; KEGG: saq:Sare_2399 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YIY5 Transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003682805.1	COGs: COG2311 membrane protein; InterPro IPR007349:IPR007299; KEGG: tfu:Tfu_1066 hypothetical protein; PFAM: protein of unknown function DUF418; protein of unknown function DUF405; SPTR: C1YIY4 Predicted membrane protein, COG2311; PFAM: Protein of unknown function (DUF418)
YP_003682806.1	InterPro IPR009002:IPR011576; KEGG: sen:SACE_7205 hypothetical protein; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: C1YIY3 Pyridoxamine 5'-phosphate oxidase-related, FMN binding; PFAM: Pyridoxamine 5'-phosphate oxidase
YP_003682807.1	COGs: COG1017 Hemoglobin-like flavoprotein; InterPro IPR000971:IPR009050:IPR012292; KEGG: tfu:Tfu_1439 hypothetical protein; PFAM: globin; SPTR: C1YIY2 Hemoglobin-like flavoprotein; PFAM: Globin
YP_003682808.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: sro:Sros_0824 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1YIY1 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter
YP_003682809.1	InterPro IPR013525; KEGG: sro:Sros_9333 hypothetical protein; PFAM: ABC-2 type transporter; SPTR: C1YIY0 ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter
YP_003682810.1	COGs: COG4585 Signal transduction histidine kinase; InterProIPR017205:IPR003594:IPR011712:IPR005467:IPR 004358; KEGG: cai:Caci_0174 histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; PRIAM: Histidine kinase; SMART: ATP-binding region ATPase domain protein; SPTR: C1YIX9 Signal transduction histidine kinase, COG4585; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003682811.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR000792:IPR001789:IPR011006:IPR016032:IPR 011991; KEGG: cai:Caci_0175 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YIX8 Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003682812.1	COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR018062:IPR000092:IPR008949:IPR018549; KEGG: polyprenyl synthase; PFAM: Polyprenyl synthetase; Protein of unknown function DUF2006; SPTR: C1YIX7 Geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; Hydroxyneurosporene synthase (CrtC)
YP_003682813.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: sco:SCO0121 ABC transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1YIX6 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter
YP_003682814.1	KEGG: sco:SCO0120 integral membrane protein; SPTR: C1YIX5  uncharacterized protein
YP_003682815.1	InterPro IPR005039; KEGG: stp:Strop_4013 BRO domain-containing protein; PFAM: phage antirepressor protein; SPTR: C1YIX4 Phage antirepressor KilAC-like protein; PFAM: Phage antirepressor protein KilAC domain
YP_003682816.1	COGs: COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase; InterPro IPR000322:IPR017853; KEGG: sco:SCO1055 alpha-xylosidase YicI; PFAM: glycoside hydrolase family 31; SPTR: C1YIX3 Family 31 glycosyl hydrolase, alpha-glucosidase; PFAM: Glycosyl hydrolases family 31
YP_003682817.1	COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: sco:SCO1058 sugar transport integral membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YIX2 Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003682818.1	COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: sco:SCO1057 sugar transport integral membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YIX1 Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003682819.1	COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: sco:SCO1056 sugar transport sugar binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: C1YIX0 Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein
YP_003682820.1	COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761:IPR010982; KEGG: bcv:Bcav_1317 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: C1YIW9 Transcriptional regulator, LacI family; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003682821.1	COGs: COG1048 Aconitase A; InterProIPR015931:IPR006250:IPR001030:IPR015932:IPR 000573:IPR015928; KEGG: svi:Svir_23930 aconitase; PFAM: aconitate hydratase domain protein; SPTR: C1YIW8 Aconitase; TIGRFAM: aconitate hydratase; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, , Aquifex type
YP_003682822.1	COGs: COG0730 permease; InterPro IPR002781; KEGG: tfu:Tfu_1694 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: C1YIN0 Predicted permease; PFAM: Sulfite exporter TauE/SafE
YP_003682823.1	COGs: COG2175 Probable taurine catabolism dioxygenase; InterPro IPR003819; KEGG: sro:Sros_3967 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA; PRIAM: Taurine dioxygenase; SPTR: C1YIM9 Probable taurine catabolism dioxygenase; PFAM: Taurine catabolism dioxygenase TauD, TfdA family
YP_003682824.1	COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR017909:IPR015168:IPR006311; KEGG: tfu:Tfu_1690 twin-arginine translocation pathway signal; PFAM: NMT1/THI5 like domain protein; SPTR: C1YIM8 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; PFAM: NMT1/THI5 like
YP_003682825.1	COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: tfu:Tfu_1691 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1YIM7 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; PFAM: ABC transporter
YP_003682826.1	COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: rop:ROP_50120  ABC transporter permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YIM6 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003682827.1	COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016215; KEGG: tfu:Tfu_1693  monooxygenase; SPTR: C1YIM5 Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like monooxygenase
YP_003682828.1	COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR009002:IPR012349:IPR002563; KEGG: tfu:Tfu_1498  flavin-dependent reductase; PFAM: flavin reductase domain protein FMN-binding; SMART: flavin reductase domain protein FMN-binding; SPTR: C1YIM4 Conserved protein of DIM6/NTAB family, COG1853; PFAM: Flavin reductase like domain
YP_003682829.1	KEGG: fra:Francci3_2434 hypothetical protein; SPTR: C1YIM3  uncharacterized protein
YP_003682830.1	KEGG: sen:SACE_3262 hypothetical protein; SPTR: C1YIM2  uncharacterized protein
YP_003682831.1	COGs: COG2124 Cytochrome P450; InterPro IPR017972:IPR001128:IPR002397:IPR017973; KEGG: sro:Sros_8861 hypothetical protein; PFAM: cytochrome P450; SPTR: C1YIM1 Cytochrome P450; PFAM: Cytochrome P450
YP_003682832.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR003660:IPR004358:IPR003594:IPR 009082:IPR003661; KEGG: xce:Xcel_1425 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SPTR: C1YIM0 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003682833.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001867:IPR001789:IPR011991:IPR011006; KEGG: lxx:Lxx22010 two-component system, regulatory protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein; SPTR: C1YIL9 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003682834.1	InterPro IPR001254:IPR001314:IPR018114:IPR009003; KEGG: sco:SCO4985 hypothetical protein; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; SPTR: C1YIL8 Secreted trypsin-like serine protease; PFAM: Trypsin
YP_003682835.1	InterPro IPR001647:IPR009057; KEGG: rer:RER_08610 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YIL7 Transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003682836.1	COGs: COG2819 hydrolase of the alpha/beta superfamily; InterPro IPR000801; KEGG: rer:RER_08630 hypothetical protein; PFAM:  esterase; SPTR: C1YIL5 Predicted hydrolase of alpha/beta superfamily; PFAM:  esterase
YP_003682837.1	COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR001261:IPR011650:IPR002933; KEGG: tfu:Tfu_2787 hypothetical protein; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: C1YIL4 Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_003682838.1	KEGG: hypothetical protein; SPTR: C1YIL3  uncharacterized protein
YP_003682839.1	InterPro IPR005528:IPR019931; KEGG: hypothetical protein; PFAM: protein of unknown function DUF320; SPTR: C1YIL2 Small secreted domain-containing protein (DUF320); TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: Small secreted domain (DUF320); TIGRFAM: LPXTG-motif cell wall anchor domain
YP_003682840.1	KEGG: sro:Sros_9225 hypothetical protein; SPTR: C1YIL1  uncharacterized protein
YP_003682841.1	COGs: COG0550 Topoisomerase IA; InterProIPR005733:IPR000380:IPR013824:IPR013826:IPR 006154:IPR003601:IPR003602:IPR006171:IPR013497; KEGG: tfu:Tfu_2784 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; SPTR: C1YIL0 DNA topoisomerase; TIGRFAM: DNA topoisomerase I; PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial
YP_003682842.1	COGs: COG0125 Thymidylate kinase; InterPro IPR018094:IPR016196:IPR011701:IPR000062; KEGG: tfu:Tfu_2783 thymidylate kinase; PFAM: thymidylate kinase; major facilitator superfamily MFS_1; PRIAM: dTMP kinase; SPTR: C1YIK9 Thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: Bacterial protein of unknown function (DUF894); Thymidylate kinase; TIGRFAM: thymidylate kinase
YP_003682843.1	COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR003593; KEGG: tfu:Tfu_2782 DNA polymerase III subunit delta'; PRIAM: DNA-directed DNA polymerase; SMART: AAA ATPase; SPTR: C1YIK8 DNA polymerase III, delta prime subunit; PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III, delta' subunit
YP_003682844.1	InterPro IPR013595; KEGG: tfu:Tfu_2780 tripeptidyl-peptidase B; PFAM: TAP domain protein; SPTR: C1YIK7 Alpha/beta hydrolase family protein; PFAM: alpha/beta hydrolase fold
YP_003682845.1	KEGG: sro:Sros_7037 hypothetical protein; SPTR: C1YIK6  uncharacterized protein
YP_003682846.1	KEGG: ach:Achl_3345 hypothetical protein; SPTR: C1YIK5  uncharacterized protein
YP_003682847.1	COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR012337:IPR013520; KEGG: cai:Caci_1509 exonuclease RNase T and DNA polymerase III; PFAM: Exonuclease RNase T and DNA polymerase III; SPTR: C1YIK4 DNA polymerase III, epsilon subunit; PFAM: Exonuclease
YP_003682848.1	KEGG: tcu:Tcur_1082 hypothetical protein; SPTR: C1YIK3  uncharacterized protein
YP_003682849.1	KEGG: tfu:Tfu_2899 hypothetical protein; SPTR: C1YIK2  uncharacterized protein
YP_003682850.1	KEGG: tfu:Tfu_2900 hypothetical protein; SPTR: C1YIK1  uncharacterized protein
YP_003682851.1	KEGG: tfu:Tfu_2901 hypothetical protein; SPTR: C1YIK0  uncharacterized protein
YP_003682852.1	InterPro IPR013325; KEGG: tcu:Tcur_4512 RNA polymerase, sigma-24 subunit, ECF subfamily; SPTR: C1YIJ9  uncharacterized protein
YP_003682853.1	COGs: COG0221 Inorganic pyrophosphatase; InterPro IPR008162; KEGG: tfu:Tfu_2902 inorganic diphosphatase; PFAM: Inorganic pyrophosphatase; PRIAM: Inorganic diphosphatase; SPTR: C1YIJ8 Inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase
YP_003682854.1	COGs: COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); InterPro IPR000667:IPR012338; KEGG: tfu:Tfu_2903 peptidase S13, D-Ala-D-Ala carboxypeptidase C; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; SPTR: C1YIJ7 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: D-alanyl-D-alanine carboxypeptidase; D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
YP_003682855.1	COGs: COG5282 conserved hypothetical protein; InterPro IPR018766; KEGG: tfu:Tfu_2898 hypothetical protein; PFAM: Protein of unknown function DUF2342; SPTR: C1YIJ6 Uncharacterized conserved protein; TIGRFAM: conserved hypothetical protein; PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: conserved hypothetical protein
YP_003682856.1	COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; InterPro IPR012795:IPR014729:IPR011063; KEGG: tfu:Tfu_2897 helix-turn-helix, fis-type; PFAM: PP-loop domain protein; SPTR: C1YIJ5 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop family; TilS substrate binding domain; TIGRFAM: tRNA(Ile)-lysidine synthetase, N-terminal domain
YP_003682857.1	COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR005904:IPR000836; KEGG: tfu:Tfu_2896 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase; SPTR: C1YIJ4 Hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase
YP_003682858.1	COGs: COG0465 ATP-dependent Zn protease; InterProIPR005936:IPR003593:IPR003960:IPR011546:IPR 003959:IPR000642; KEGG: tfu:Tfu_2895 Mername-AA223 peptidase; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; PRIAM: Microtubule-severing ATPase; SMART: AAA ATPase; SPTR: C1YIJ3 Membrane protease FtsH catalytic subunit; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH
YP_003682859.1	COGs: COG0302 GTP cyclohydrolase I; InterPro IPR001474:IPR018234:IPR020602; KEGG: tfu:Tfu_2894 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: C1YIJ2 GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I
YP_003682860.1	COGs: COG0294 Dihydropteroate synthase; InterPro IPR006390:IPR000489:IPR011005; KEGG: tfu:Tfu_2893 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; PRIAM: Dihydropteroate synthase; SPTR: C1YIJ1 Dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase
YP_003682861.1	KEGG: tfu:Tfu_2892 3-dehydroquinate dehydratase; SPTR: C1YIJ0  uncharacterized protein
YP_003682862.1	COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550:IPR006156:IPR006157; KEGG: fre:Franean1_0169 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; dihydroneopterin aldolase; PRIAM: Dihydroneopterin aldolase., 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; SMART: dihydroneopterin aldolase; SPTR: C1YII9 Dihydroneopterin aldolase/2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: dihydroneopterin aldolase; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; FolB domain
YP_003682863.1	KEGG: tfu:Tfu_2889 hypothetical protein; SPTR: C1YII8  uncharacterized protein; PFAM: Protein of unknown function (DUF3180)
YP_003682864.1	COGs: COG3402 conserved hypothetical protein; InterPro IPR005182; KEGG: tfu:Tfu_2888 hypothetical protein; PFAM: membrane-flanked domain; SPTR: C1YII7 Uncharacterized conserved protein; PFAM: Bacterial membrane flanked domain
YP_003682865.1	COGs: COG3428 membrane protein; InterPro IPR005182; KEGG: tfu:Tfu_2887 hypothetical protein; PFAM: membrane-flanked domain; SPTR: C1YII6 Predicted membrane protein, COG3428; PFAM: Bacterial membrane flanked domain
YP_003682866.1	KEGG: tfu:Tfu_2886  small membrane protein; SPTR: C1YII5  uncharacterized protein
YP_003682867.1	KEGG: cai:Caci_7085 hypothetical protein; SPTR: C1YII4  uncharacterized protein
YP_003682868.1	COGs: COG5495 conserved hypothetical protein; InterPro IPR016040:IPR018931:IPR019665; KEGG: tfu:Tfu_2885 hypothetical protein; PFAM:  oxidoreductase/dehydrogenase, Rossmann-like domain; Domain of unknown function DUF2520; SPTR: C1YII3 Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF2520); Rossmann-like domain
YP_003682869.1	COGs: COG0414 Panthothenate synthetase; InterPro IPR003721:IPR014729:IPR004821; KEGG: tfu:Tfu_2884 pantothenate synthetase; PFAM: Pantoate-beta-alanine ligase; PRIAM: Pantoate--beta-alanine ligase; SPTR: C1YII2 Pantothenate synthetase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain
YP_003682870.1	COGs: COG0029 Aspartate oxidase; InterProIPR004393:IPR004112:IPR003953:IPR002638:IPR 015939:IPR013785:IPR005288; KEGG: tfu:Tfu_2883 L-aspartate oxidase; PFAM: Quinolinate phosphoribosyl transferase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: C1YII1 Nicotinate-nucleotide pyrophosphorylase/L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; nicotinate-nucleotide pyrophosphorylase; PFAM: domain; FAD binding domain; Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: L-aspartate oxidase; nicotinate-nucleotide pyrophosphorylase
YP_003682871.1	COGs: COG1521  transcriptional regulator protein; InterPro IPR004619; KEGG: tfu:Tfu_2882 pantothenate kinase; PFAM: Bvg accessory factor; SPTR: C1YII0 Pantothenate kinase; TIGRFAM: transcriptional activator, Baf family; PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III
YP_003682872.1	InterPro IPR006596:IPR002716; KEGG: mbt:JTY_1588 hypothetical protein; PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; SPTR: C1YIH9 Predicted nucleic acid-binding protein, contains PIN domain; PFAM: PIN domain
YP_003682873.1	InterPro IPR019239; KEGG: mbt:JTY_1587 hypothetical protein; PFAM: Protein of unknown function DUF2191; SPTR: C1YIH8  uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2191)
YP_003682874.1	COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: saq:Sare_0901 cation diffusion facilitator family transporter; PFAM: cation efflux protein; SPTR: C1YIH7 Cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_003682875.1	COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR002313:IPR006195:IPR018149:IPR016027:IPR 012340:IPR004365:IPR004364; KEGG: tfu:Tfu_2881 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: C1YIH6 Lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
YP_003682876.1	InterPro IPR016032:IPR011991:IPR000792; KEGG: tfu:Tfu_2880 regulatory protein, LuxR; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: C1YIH5 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family
YP_003682877.1	COGs: COG1246 N-acetylglutamate synthase and related acetyltransferase; InterPro IPR000182:IPR016181; KEGG: tfu:Tfu_2879 N-acetylglutamate synthase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YIH4 N-acetylglutamate synthase; PFAM: Acetyltransferase (GNAT) family
YP_003682878.1	KEGG: sro:Sros_4980 hypothetical protein; SPTR: C1YIH3  uncharacterized protein
YP_003682879.1	KEGG: tfu:Tfu_2877  Lsr2-like protein; SPTR: C1YIH2  uncharacterized protein; PFAM: Lsr2
YP_003682880.1	COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR001943:IPR001270:IPR018368:IPR003593:IPR 004176:IPR003959:IPR013093:IPR019489; KEGG: tfu:Tfu_2876 ATPase; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: C1YIH1 ATPase with chaperone activity, ATP-binding subunit; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif
YP_003682881.1	KEGG: tfu:Tfu_0640 hypothetical protein; SPTR: C1YIH0  uncharacterized protein; PFAM: Protein of unknown function (DUF3105)
YP_003682882.1	COGs: COG1194 A/G-specific DNA glycosylase; InterProIPR003583:IPR004036:IPR003265:IPR000445:IPR 003651:IPR011257; KEGG: tcu:Tcur_4471 HhH-GPD family protein; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; iron-sulfur cluster loop; SMART: HhH-GPD family protein; iron-sulfur cluster loop; Helix-hairpin-helix DNA-binding class 1; SPTR: C1YIG9 A/G-specific DNA-adenine glycosylase; PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase
YP_003682883.1	KEGG: tfu:Tfu_2874 hypothetical protein; SPTR: C1YIG8  uncharacterized protein
YP_003682884.1	COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078:IPR001345; KEGG: fal:FRAAL0174  phosphoglycerate mutase 2 protein; PFAM: Phosphoglycerate mutase; SMART: Phosphoglycerate mutase; SPTR: C1YIG7 Fructose-2,6-bisphosphatase; PFAM: Phosphoglycerate mutase family
YP_003682885.1	InterPro IPR000691; KEGG: ami:Amir_6244 proteinase inhibitor I16 subtilisin-type inhibitor; PFAM: proteinase inhibitor I16 subtilisin-type inhibitor; SPTR: C1YIG6 Subtilisin inhibitor-like protein; PFAM: Subtilisin inhibitor-like
YP_003682886.1	COGs: COG1066 ATP-dependent serine protease; InterPro IPR004504:IPR020568:IPR003593; KEGG: tfu:Tfu_2711 DNA repair protein RadA; SMART: AAA ATPase; SPTR: C1YIG5 DNA repair protein radA; TIGRFAM: DNA repair protein RadA; PFAM: KaiC; TIGRFAM: DNA repair protein RadA
YP_003682887.1	InterPro IPR013830:IPR013831; KEGG: cai:Caci_5610 GDSL family lipase; SPTR: C1YIG4  uncharacterized protein
YP_003682888.1	COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: tfu:Tfu_2262 cell wall-associated hydrolase (invasion-associated proteins); PFAM: NLP/P60 protein; SPTR: C1YIG3 Cell wall-associated hydrolase, invasion-associated protein; PFAM: NlpC/P60 family
YP_003682889.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR013022:IPR012307; KEGG: tfu:Tfu_2709 hypothetical protein; PFAM: Xylose isomerase domain protein TIM barrel; SPTR: C1YIG2 Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel
YP_003682890.1	COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR000304:IPR016040:IPR004455; KEGG: tfu:Tfu_2708 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: C1YIG1 Pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase
YP_003682891.1	KEGG: sgr:SGR_2193 hypothetical protein; SPTR: C1YIG0  uncharacterized protein
YP_003682892.1	COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286:IPR003085; KEGG: tfu:Tfu_2707  acetoin utilization protein; PFAM: histone deacetylase superfamily; PRIAM: Histone deacetylase; SPTR: C1YIF9 Deacetylase, histone deacetylase/acetoin utilization protein; PFAM: Histone deacetylase domain
YP_003682893.1	KEGG: tfu:Tfu_2706 hypothetical protein; SPTR: C1YIF8  uncharacterized protein
YP_003682894.1	InterPro IPR009061:IPR010093; KEGG: tcu:Tcur_4450 DNA binding domain protein, excisionase family; SPTR: C1YIF7 DNA-binding protein, excisionase family; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family
YP_003682895.1	COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterProIPR017936:IPR017937:IPR012336:IPR012335:IPR 013740; KEGG: tfu:Tfu_2704 hypothetical protein; PFAM: Redoxin domain protein; SPTR: C1YIF6 Thiol-disulfide isomerase-like thioredoxin; PFAM: Redoxin
YP_003682896.1	COGs: COG0785 Cytochrome c biogenesis protein; InterPro IPR003834; KEGG: tfu:Tfu_2703  cytochrome c biogenesis membrane protein; PFAM: cytochrome c biogenesis protein transmembrane region; SPTR: C1YIF5 Cytochrome c biogenesis protein; PFAM: Cytochrome C biogenesis protein transmembrane region
YP_003682897.1	COGs: COG1333 ResB protein required for cytochrome c biosynthesis; InterPro IPR007816; KEGG: tfu:Tfu_2702  integral membrane protein; PFAM: ResB family protein; SPTR: C1YIF4 ResB protein required for cytochrome c biosynthesis; PFAM: ResB-like family
YP_003682898.1	COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR017562:IPR002541; KEGG: tfu:Tfu_2701 CcsB; PFAM: cytochrome c assembly protein; SPTR: C1YIF3 Cytochrome c-type biogenesis protein CcsB; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB
YP_003682899.1	COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR010982:IPR001761; KEGG: sro:Sros_1502 periplasmic binding protein/LacI transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: C1YIF2 Transcriptional regulator, LacI family; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003682900.1	COGs: COG3866 Pectate lyase; InterPro IPR002022:IPR011050:IPR012334; KEGG: sro:Sros_1493 pectate lyase; PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; SPTR: C1YIF1 Pectate lyase; PFAM: Pectate lyase
YP_003682901.1	InterPro IPR017909; KEGG: mbt:JTY_3052 hypothetical protein; SPTR: C1YIF0  uncharacterized protein
YP_003682902.1	KEGG: tfu:Tfu_2700 hypothetical protein; SPTR: C1YIE9  uncharacterized protein
YP_003682903.1	InterPro IPR010093:IPR009061:IPR000551; KEGG: tfu:Tfu_2699 excisionase/Xis, DNA-binding; PFAM: regulatory protein MerR; SPTR: Q47LE0 Excisionase/Xis, DNA-binding; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: MerR family regulatory protein; TIGRFAM: DNA binding domain, excisionase family
YP_003682904.1	KEGG: tfu:Tfu_2698 hypothetical protein; SPTR: C1YIE7  uncharacterized protein
YP_003682905.1	InterPro IPR016196:IPR011701; KEGG: sgr:SGR_1804 major facilitator superfamily permease; PFAM: major facilitator superfamily MFS_1; SPTR: C1YIE6 Major Facilitator Superfamily transporter; PFAM: Major Facilitator Superfamily
YP_003682906.1	InterPro IPR011991:IPR001845; KEGG: sgr:SGR_1803 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: C1YIE5 Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family
YP_003682907.1	KEGG: sen:SACE_5807 hypothetical protein; SPTR: C1YIE4  uncharacterized protein
YP_003682908.1	KEGG: sen:SACE_5808 hypothetical protein; SPTR: C1YIE3  uncharacterized protein
YP_003682909.1	InterPro IPR011044:IPR015943; KEGG: sro:Sros_0581 hypothetical protein; SPTR: C1YIE2  uncharacterized protein
YP_003682910.1	COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR002938:IPR003042; KEGG: pag:PLES_07101 hypothetical protein; PFAM: monooxygenase FAD-binding; SPTR: C1YIE1 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain
YP_003682911.1	InterPro IPR011008:IPR007138; KEGG: sen:SACE_1841 antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: C1YIE0 Antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase
YP_003682912.1	InterPro IPR004360; KEGG: sus:Acid_0571 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YID9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003682913.1	KEGG: ATOH8; atonal homolog 8 (Drosophila); K09084 atonal protein 8; SPTR: Q96SQ7 Protein atonal homolog 8
YP_003682914.1	InterPro IPR003115:IPR009057; KEGG: sgr:SGR_5931 streptomycin biosynthesis operon regulator; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: C1YID8 ParB-like nuclease; PFAM: ParB-like nuclease domain
YP_003682915.1	InterPro IPR004964; KEGG: bgl:bglu_2g09240 phenazine biosynthesis protein A/B; PFAM: Phenazine biosynthesis protein A/B; SPTR: C1YID7 Phenazine biosynthesis protein A/B; PFAM: Phenazine biosynthesis protein A/B
YP_003682916.1	COGs: COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR002480; KEGG: pau:PA14_09460 phenazine biosynthesis protein PhzC; PFAM: DAHP synthetase class II; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: C1YID6 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; PFAM: Class-II DAHP synthetase family
YP_003682917.1	COGs: COG1535 Isochorismate hydrolase; InterPro IPR000868:IPR003881; KEGG: pap:PSPA7_3382 phenazine biosynthesis protein PhzD; PFAM: isochorismatase hydrolase; PRIAM: Isochorismatase; SPTR: C1YID5 Isochorismate hydrolase; PFAM: Isochorismatase family
YP_003682918.1	COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterProIPR017926:IPR011702:IPR006220:IPR001317:IPR 005801:IPR015890:IPR000991; KEGG: pap:PSPA7_3381 phenazine biosynthesis protein PhzE; PFAM: glutamine amidotransferase class-I; Chorismate binding-like; SPTR: C1YID4 Anthranilate/para-aminobenzoate synthase component I; PFAM: Glutamine amidotransferase class-I; chorismate binding enzyme
YP_003682919.1	COGs: COG0384 epimerase PhzC/PhzF homolog; InterPro IPR003719; KEGG: pag:PLES_34201  phenazine biosynthesis protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein; SPTR: C1YID3 Phenazine biosynthesis protein PhzF family; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family
YP_003682920.1	COGs: COG0259 Pyridoxamine-phosphate oxidase; InterPro IPR009002:IPR012349:IPR011576:IPR019576; KEGG: bgl:bglu_2g09280 pyridoxamine-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; Pyridoxine 5'-phosphate oxidase, dimerisation-like; PRIAM: Pyridoxal 5'-phosphate synthase; SPTR: C1YID2 Pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
YP_003682921.1	COGs: COG2072 flavoprotein involved in K+ transport; InterPro IPR006076; KEGG: rer:pREL1_0297 flavin-containing Baeyer-Villiger monooxygenase; PFAM: FAD dependent oxidoreductase; PRIAM: Cyclohexanone monooxygenase; SPTR: C1YID1 Predicted flavoprotein involved in K+ transport; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003682922.1	COGs: COG1182 Acyl carrier protein phosphodiesterase; InterPro IPR003680; KEGG: sro:Sros_5486 (acyl-carrier-protein) phosphodiesterase; PFAM: NAD(P)H dehydrogenase (quinone); SPTR: C1YID0 Acyl carrier protein phosphodiesterase; PFAM: Flavodoxin-like fold
YP_003682923.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013324:IPR013249:IPR013325:IPR014284:IPR 007627; KEGG: scl:sce6834 ECF family RNA polymerase sigma factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: C1YIC7 RNA polymerase, sigma subunit, ECF family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003682924.1	KEGG: tfu:Tfu_1352 hypothetical protein; SPTR: C1YIC9  uncharacterized protein
YP_003682925.1	KEGG: hypothetical protein; SPTR: C1YIC8  uncharacterized protein
YP_003682926.1	InterPro IPR007278; KEGG: tfu:Tfu_0262 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YIC6  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003682927.1	InterPro IPR001387:IPR010982; KEGG: tfu:Tfu_1656 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YIC5 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003682928.1	InterPro IPR003594; KEGG: sro:Sros_3148  anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: C1YIC4 Histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003682929.1	KEGG: hypothetical protein; SPTR: C1YIC3  uncharacterized protein
YP_003682930.1	KEGG: svi:Svir_23730 hypothetical protein; SPTR: C1YIC2  uncharacterized protein
YP_003682931.1	KEGG: svi:Svir_23500 hypothetical protein; SPTR: C1YIC1  uncharacterized protein
YP_003682932.1	KEGG: svi:Svir_23730 hypothetical protein; SPTR: C1YIC2  uncharacterized protein
YP_003682933.1	KEGG: svi:Svir_23500 hypothetical protein; SPTR: C1YIB9  uncharacterized protein
YP_003682934.1	KEGG: svi:Svir_23730 hypothetical protein; SPTR: C1YIC2  uncharacterized protein
YP_003682935.1	KEGG: sen:SACE_0587 hypothetical protein; SPTR: C1YIB7  uncharacterized protein
YP_003682936.1	KEGG: sma:SAV_4095 hypothetical protein; SPTR: C1YIB6  uncharacterized protein
YP_003682937.1	KEGG: hypothetical protein; SPTR: C1YIB5  uncharacterized protein
YP_003682938.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR004033; KEGG: tfu:Tfu_2697 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; SPTR: C1YIB4 Ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases
YP_003682939.1	COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR011777:IPR003042:IPR006076; KEGG: tfu:Tfu_2696 geranylgeranyl reductase, plantal and; PFAM: FAD dependent oxidoreductase; SPTR: C1YIB3 Geranylgeranyl reductase family protein; TIGRFAM: geranylgeranyl reductase; PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase family
YP_003682940.1	COGs: COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); InterPro IPR000440; KEGG: tfu:Tfu_2695 NADH dehydrogenase subunit A; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; SPTR: C1YIB2 NADH-quinone oxidoreductase subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YP_003682941.1	COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; InterPro IPR006138:IPR006137; KEGG: tfu:Tfu_2694 NADH dehydrogenase subunit B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: C1YIB1 NADH dehydrogenase subunit B; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit
YP_003682942.1	COGs: COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; InterPro IPR001268:IPR010218; KEGG: tfu:Tfu_2693 NADH dehydrogenase subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; SPTR: C1YIB0 NADH dehydrogenase subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C
YP_003682943.1	COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; InterPro IPR001135:IPR010219:IPR014029; KEGG: tfu:Tfu_2692 NADH dehydrogenase subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; PRIAM: NADH dehydrogenase (quinone); SPTR: C1YIA9 NADH dehydrogenase subunit D; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit
YP_003682944.1	COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023:IPR012336:IPR012335; KEGG: tfu:Tfu_2691 NADH dehydrogenase subunit E; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: C1YIA8 NADH dehydrogenase subunit E; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit
YP_003682945.1	COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR011537:IPR001949:IPR011538:IPR019554:IPR 019575; KEGG: tfu:Tfu_2690 NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: C1YIA7 NADH dehydrogenase subunit F; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit
YP_003682946.1	COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterProIPR010228:IPR001041:IPR000283:IPR009010:IPR 019574:IPR006963:IPR006656:IPR006657; KEGG: tfu:Tfu_2689 NADH dehydrogenase subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: C1YIA6 NADH-quinone oxidoreductase; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: NADH-quinone oxidoreductase, chain G
YP_003682947.1	COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); InterPro IPR018086:IPR001694; KEGG: tfu:Tfu_2688 NADH dehydrogenase subunit H; PFAM: respiratory-chain NADH dehydrogenase subunit 1; PRIAM: NADH dehydrogenase (quinone); SPTR: C1YIA5 NADH dehydrogenase subunit H; PFAM: NADH dehydrogenase
YP_003682948.1	COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterProIPR010226:IPR017896:IPR017900:IPR019758:IPR 009051:IPR001450; KEGG: tfu:Tfu_2687 NADH dehydrogenase subunit I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C1YIA4 NADH dehydrogenase subunit I; TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I
YP_003682949.1	COGs: COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); InterPro IPR001457; KEGG: tfu:Tfu_2686 NADH dehydrogenase subunit J; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; SPTR: C1YIA3 NADH dehydrogenase subunit J; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6
YP_003682950.1	COGs: COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); InterPro IPR001133; KEGG: tfu:Tfu_2685 NADH dehydrogenase subunit K; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: C1YIA2 NADH dehydrogenase subunit K; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_003682951.1	COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterProIPR003945:IPR003916:IPR018393:IPR018486:IPR 001516:IPR001750; KEGG: tfu:Tfu_2684 NADH dehydrogenase subunit L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; PRIAM: NADH dehydrogenase (quinone); SPTR: C1YIA1 NADH dehydrogenase subunit L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L
YP_003682952.1	COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR010227:IPR003918:IPR001750; KEGG: tfu:Tfu_2683 NADH dehydrogenase subunit M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: C1YIA0 NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M
YP_003682953.1	COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); InterPro IPR010096:IPR001750; KEGG: tfu:Tfu_2682 NADH dehydrogenase subunit N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: C1YI99 NADH dehydrogenase subunit N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N
YP_003682954.1	COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092:IPR008949; KEGG: tfu:Tfu_2681 trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase; PRIAM: Trans-hexaprenyltranstransferase; SPTR: C1YI98 Geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase
YP_003682955.1	KEGG: bcv:Bcav_0509 PT repeat family protein; SPTR: C1YI97  uncharacterized protein
YP_003682956.1	KEGG: FAP91; flagellar associated protein; SPTR: C1YI96  uncharacterized protein
YP_003682957.1	COGs: COG2962 permease; InterPro IPR004626:IPR000620; KEGG: tfu:Tfu_2679 RarD protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C1YI95 RarD protein; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: EamA-like transporter family; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); rarD protein
YP_003682958.1	COGs: COG0225 Peptide methionine sulfoxide reductase; InterPro IPR002569; KEGG: tfu:Tfu_2678 methionine sulfoxide reductase A; PFAM: Methionine sulfoxide reductase A; PRIAM: Peptide-methionine (S)-S-oxide reductase; SPTR: C1YI94 Methionine-S-sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase
YP_003682959.1	COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: sco:SCO6603 transmembrane sugar transport protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YI93 Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003682960.1	COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: sco:SCO6602 transmembrane sugar transport protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YI92 Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003682961.1	COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: sen:SACE_1890  secreted sugar binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: C1YI91 Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein
YP_003682962.1	COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761:IPR010982; KEGG: saq:Sare_1119 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: C1YI90 Transcriptional regulator, LacI family; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003682963.1	COGs: COG3440 restriction endonuclease; InterPro IPR003615:IPR011396; KEGG: sro:Sros_7809 hypothetical protein; SMART: HNH nuclease; SPTR: C1YI89 Predicted restriction endonuclease
YP_003682964.1	COGs: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; InterProIPR016120:IPR000014:IPR013767:IPR003594:IPR 005467:IPR004358; KEGG: sro:Sros_8065 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; SPTR: C1YI88 Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003682965.1	COGs: COG4565 Response regulator of citrate/malate metabolism; InterPro IPR001789:IPR011006; KEGG: sro:Sros_8064 response regulator of citrate/malate metabolism; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: C1YI87 Response regulator of citrate/malate metabolism; PFAM: HTH domain; Response regulator receiver domain
YP_003682966.1	COGs: COG4636 conserved hypothetical protein; InterPro IPR012296:IPR008538; KEGG: sen:SACE_1463 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: C1YI86 Uncharacterized conserved protein; PFAM: Protein of unknown function (DUF820)
YP_003682967.1	InterPro IPR004360; KEGG: stp:Strop_0011 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YI85 Predicted lactoylglutathione lyase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003682968.1	COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR013027:IPR002218; KEGG: sro:Sros_7245 amine oxidase, flavin-containing; PFAM: glucose-inhibited division protein A; SPTR: C1YI84 FAD dependent oxidoreductase; PFAM: FAD binding domain
YP_003682969.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013324:IPR013249:IPR013325:IPR014284:IPR 007627; KEGG: sro:Sros_7244 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: C1YI83 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003682970.1	COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182:IPR016181; KEGG: sro:Sros_0623 acetyltransferase including N-acetylase of ribosomal protein-like protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YI82 Acetyltransferase, ribosomal protein N-acetylase; PFAM: Acetyltransferase (GNAT) family
YP_003682971.1	KEGG: bja:blr4715  outer-membrane immunogenic protein precursor; SPTR: C1YI81  uncharacterized protein
YP_003682972.1	KEGG: similar to aggrecan 1 (chondroitin sulfate proteoglycan 1, large aggregating proteoglycan, antigen identified by monoclonal antibody A0122); K06792 aggrecan 1; SPTR: C1YI80  uncharacterized protein
YP_003682973.1	KEGG: tfu:Tfu_2677 hypothetical protein; SPTR: C1YI79  uncharacterized protein
YP_003682974.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: tfu:Tfu_2676 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YI78 NAD dependent epimerase/dehydratase family protein; PFAM: NAD dependent epimerase/dehydratase family
YP_003682975.1	COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: tfu:Tfu_2675 2-oxoglutarate ferredoxin oxidoreductase subunit beta; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; SPTR: C1YI77 2-oxoacid:ferredoxin oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_003682976.1	COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002869:IPR009014:IPR002880; KEGG: tfu:Tfu_2674 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SPTR: C1YI76 2-oxoacid:ferredoxin oxidoreductase, alpha subunit; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase
YP_003682977.1	COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: tfu:Tfu_2673 HtpX-2 peptidase; PFAM: peptidase M48 Ste24p; SPTR: C1YI75 Heat shock protein; PFAM: Peptidase family M48
YP_003682978.1	COGs: COG1666 conserved hypothetical protein; InterPro IPR007551; KEGG: tfu:Tfu_2672  nucleotide-binding protein; PFAM: protein of unknown function DUF520; SPTR: C1YI74 Uncharacterized conserved protein; PFAM: Protein of unknown function (DUF520)
YP_003682979.1	KEGG: sen:SACE_0918 hypothetical protein; SPTR: C1YI73  uncharacterized protein
YP_003682980.1	KEGG: sen:SACE_0918 hypothetical protein; SPTR: C1YI72  uncharacterized protein
YP_003682981.1	KEGG: sen:SACE_0918 hypothetical protein; SPTR: C1YI71  uncharacterized protein
YP_003682982.1	KEGG: sen:SACE_0918 hypothetical protein; SPTR: C1YI70  uncharacterized protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003682983.1	KEGG: sro:Sros_0739 hypothetical protein; SPTR: C1YI69  uncharacterized protein
YP_003682984.1	KEGG: tfu:Tfu_2671 hypothetical protein; SPTR: C1YI68  uncharacterized protein; PFAM: Protein of unknown function (DUF2397)
YP_003682985.1	InterPro IPR013494; KEGG: tfu:Tfu_2670 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C1YI67  uncharacterized protein; PFAM: Protein of unknown function (DUF2398); TIGRFAM: conserved hypothetical protein TIGR02678
YP_003682986.1	InterPro IPR013496:IPR019775; KEGG: tfu:Tfu_2669 hypothetical protein; SPTR: Q47LH0  uncharacterized protein; TIGRFAM: conserved hypothetical protein TIGR02680
YP_003682987.1	InterPro IPR017871:IPR005829:IPR003395; KEGG: tfu:Tfu_2668 hypothetical protein; PFAM: SMC domain protein; SPTR: C1YI60 RecF/RecN/SMC N-terminal domain-containing protein
YP_003682988.1	COGs: COG0267 Ribosomal protein L33; InterPro IPR001705:IPR018264; KEGG: tfu:Tfu_2667 50S ribosomal protein L33; PFAM: ribosomal protein L33; SPTR: C1YI59 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type
YP_003682989.1	InterPro IPR016709; KEGG: tfu:Tfu_2666 hypothetical protein; SPTR: C1YI58 Acyl dehydratase
YP_003682990.1	COGs: COG2030 Acyl dehydratase; InterPro IPR003965:IPR002539; KEGG: tfu:Tfu_2665 hypothetical protein; PFAM: MaoC domain protein dehydratase; SPTR: C1YI57 Acyl dehydratase; PFAM: MaoC like domain
YP_003682991.1	COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; InterProIPR003170:IPR016166:IPR011601:IPR016167:IPR 016169:IPR006094; KEGG: tfu:Tfu_2664 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein; PRIAM: UDP-N-acetylmuramate dehydrogenase; SPTR: C1YI56 UDP-N-acetylmuramate dehydrogenase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase
YP_003682992.1	COGs: COG2119 membrane protein; InterPro IPR001727; KEGG: tfu:Tfu_2663 hypothetical protein; PFAM: protein of unknown function UPF0016; SPTR: C1YI55 Predicted membrane protein, COG2119; PFAM: Uncharacterized protein family UPF0016
YP_003682993.1	COGs: COG1816 Adenosine deaminase; InterPro IPR006330:IPR006650:IPR001365; KEGG: tfu:Tfu_2662 adenosine deaminase; PFAM: adenosine/AMP deaminase; PRIAM: Adenosine deaminase; SPTR: C1YI54 Adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase
YP_003682994.1	COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterProIPR001176:IPR004838:IPR005829:IPR015424:IPR 015421:IPR004839; KEGG: tfu:Tfu_2661 aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: C1YI53 L-aspartate aminotransferase; PFAM: Aminotransferase class I and II
YP_003682995.1	COGs: COG0690 Preprotein translocase subunit SecE; InterPro IPR005807:IPR001901; KEGG: tfu:Tfu_2660 protein translocase subunit SecE/sec61 gamma; PFAM: protein secE/sec61-gamma protein; SPTR: C1YI52 Preprotein translocase, SecE subunit; TIGRFAM: preprotein translocase, SecE subunit; PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial
YP_003682996.1	COGs: COG0250 Transcription antiterminator; InterProIPR001062:IPR015869:IPR006645:IPR008991:IPR 014722:IPR005824; KEGG: tfu:Tfu_2659 transcription antitermination protein NusG; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein; SPTR: C1YIW7 Transcription antitermination protein nusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: Transcription termination factor nusG; TIGRFAM: transcription termination/antitermination factor NusG
YP_003682997.1	COGs: COG0080 Ribosomal protein L11; InterPro IPR020784:IPR020783:IPR006519:IPR000911; KEGG: tfu:Tfu_2658 50S ribosomal protein L11P; PFAM: Ribosomal protein L11-like; SMART: ribosomal protein L11; SPTR: C1YIW6 LSU ribosomal protein L11P; TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11
YP_003682998.1	COGs: COG0081 Ribosomal protein L1; InterPro IPR002143:IPR005878:IPR016094; KEGG: tfu:Tfu_2657 50S ribosomal protein L1P; PFAM: ribosomal protein L1; SPTR: C1YIW5 Ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast
YP_003682999.1	KEGG: pla:Plav_0420 hypothetical protein; SPTR: C1YIW4  uncharacterized protein; PFAM: Protein of unknown function (DUF1396)
YP_003683000.1	KEGG: kra:Krad_2946  sugar ABC transporter; SPTR: C1YIW2  uncharacterized protein
YP_003683001.1	COGs: COG0244 Ribosomal protein L10; InterPro IPR001790:IPR002363; KEGG: tfu:Tfu_2656 50S ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: C1YIW1 50S ribosomal protein L10; PFAM: Ribosomal protein L10
YP_003683002.1	COGs: COG0222 Ribosomal protein L7/L12; InterPro IPR008932:IPR000206:IPR014719:IPR013823; KEGG: tfu:Tfu_2655 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; SPTR: C1YIW0 LSU ribosomal protein L12P; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12
YP_003683003.1	COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; InterProIPR010243:IPR007121:IPR007644:IPR007642:IPR 007645:IPR019462:IPR007120:IPR007641; KEGG: tfu:Tfu_2654 DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7; PRIAM: DNA-directed RNA polymerase; SPTR: C1YIV9 DNA-directed RNA polymerase; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit
YP_003683004.1	KEGG: tfu:Tfu_2652 hypothetical protein; SPTR: C1YIV5  uncharacterized protein
YP_003683005.1	COGs: COG0048 Ribosomal protein S12; InterPro IPR006032:IPR005679:IPR016027:IPR012340; KEGG: tfu:Tfu_2651 30S ribosomal protein S12; PFAM: ribosomal protein S12/S23; SPTR: C1YIV4 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle
YP_003683006.1	COGs: COG0049 Ribosomal protein S7; InterPro IPR000235:IPR005717; KEGG: tfu:Tfu_2650 30S ribosomal protein S7; PFAM: ribosomal protein S7; SPTR: C1YIV3 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle
YP_003683007.1	COGs: COG0480 Translation elongation factors (GTPase); InterProIPR004540:IPR005225:IPR000795:IPR020568:IPR 009000:IPR009022:IPR014721:IPR000640:IPR004161:IPR005517; KEGG: tfu:Tfu_2649 elongation factor G; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein; SPTR: C1YIV2 Translation elongation factor 2 (EF-2/EF-G); TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_003683008.1	COGs: COG0050 GTPase - translation elongation factors; InterProIPR004541:IPR005225:IPR000795:IPR009001:IPR 009000:IPR004161:IPR004160; KEGG: tfu:Tfu_2648 elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; PRIAM: Sulfate adenylyltransferase; SPTR: C1YIV1 Elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU
YP_003683009.1	COGs: COG0051 Ribosomal protein S10; InterPro IPR018268:IPR001848:IPR005731; KEGG: tcu:Tcur_4322 ribosomal protein S10; PFAM: ribosomal protein S10; SPTR: C1YIV0 SSU ribosomal protein S10P; TIGRFAM: ribosomal protein S10; PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle
YP_003683010.1	COGs: COG0087 Ribosomal protein L3; InterPro IPR019926:IPR000597:IPR019927:IPR009000; KEGG: tfu:Tfu_2646 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: C1YIU9 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial
YP_003683011.1	COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: tfu:Tfu_2645 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e; SPTR: C1YIU8 LSU ribosomal protein L4P; PFAM: Ribosomal protein L4/L1 family
YP_003683012.1	COGs: COG0089 Ribosomal protein L23; InterPro IPR012678:IPR012677:IPR013025; KEGG: tfu:Tfu_2644 50S ribosomal protein L23; PFAM: Ribosomal protein L25/L23; SPTR: C1YIU7 LSU ribosomal protein L23P; PFAM: Ribosomal protein L23
YP_003683013.1	COGs: COG0090 Ribosomal protein L2; InterProIPR002171:IPR014722:IPR012340:IPR016027:IPR 008991:IPR005880; KEGG: tfu:Tfu_2643 50S ribosomal protein L2; PFAM: ribosomal protein L2; SPTR: C1YIU6 LSU ribosomal protein L2P; TIGRFAM: ribosomal protein L2; PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar
YP_003683014.1	COGs: COG0185 Ribosomal protein S19; InterPro IPR005732:IPR002222; KEGG: sro:Sros_1090 30S ribosomal protein S19; PFAM: ribosomal protein S19/S15; SPTR: C1YIU5 SSU ribosomal protein S19P; TIGRFAM: ribosomal protein S19; PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle
YP_003683015.1	COGs: COG0091 Ribosomal protein L22; InterPro IPR005727:IPR018260:IPR001063; KEGG: tfu:Tfu_2641 50S ribosomal protein L22P; PFAM: ribosomal protein L22/L17; SPTR: Q47LJ8 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type
YP_003683016.1	COGs: COG0092 Ribosomal protein S3; InterProIPR005704:IPR004044:IPR018280:IPR001351:IPR 009019:IPR015946:IPR004087:IPR008282; KEGG: tfu:Tfu_2640 30S ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein; SPTR: C1YIU3 SSU ribosomal protein S3P; TIGRFAM: ribosomal protein S3; PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type
YP_003683017.1	COGs: COG0197 Ribosomal protein L16/L10E; InterPro IPR000114:IPR020798:IPR016180; KEGG: tfu:Tfu_2639 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; SPTR: C1YIU2 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle
YP_003683018.1	COGs: COG0255 Ribosomal protein L29; InterPro IPR018254:IPR001854; KEGG: tfu:Tfu_2638 50S ribosomal protein L29P; PFAM: ribosomal protein L29; SPTR: C1YIU1 LSU ribosomal protein L29P; TIGRFAM: ribosomal protein L29; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29
YP_003683019.1	COGs: COG0186 Ribosomal protein S17; InterProIPR019979:IPR000266:IPR019984:IPR012340:IPR 016027; KEGG: sro:Sros_1095 30S ribosomal protein S17; PFAM: ribosomal protein S17; SPTR: C1YIU0 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17
YP_003683020.1	COGs: COG0093 Ribosomal protein L14; InterPro IPR005745:IPR019972:IPR000218; KEGG: tfu:Tfu_2636 50S ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; SPTR: C1YIT9 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle
YP_003683021.1	COGs: COG0198 Ribosomal protein L24; InterPro IPR003256:IPR005824:IPR005825:IPR008991; KEGG: tfu:Tfu_2635 50S ribosomal protein L24; PFAM: KOW domain protein; SMART: KOW domain protein; SPTR: C1YIT8 LSU ribosomal protein L24P; TIGRFAM: ribosomal protein L24; PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle
YP_003683022.1	COGs: COG0094 Ribosomal protein L5; InterPro IPR002132; KEGG: tfu:Tfu_2634 50S ribosomal protein L5; PFAM: ribosomal protein L5; SPTR: C1YIT7 50S ribosomal protein L5; PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5
YP_003683023.1	COGs: COG0199 Ribosomal protein S14; InterPro IPR018271:IPR001209; KEGG: tfu:Tfu_2633 SSU ribosomal protein S14P; PFAM: ribosomal protein S14; SPTR: C1YIT6 SSU ribosomal protein S14P; PFAM: Ribosomal protein S14p/S29e
YP_003683024.1	COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: tfu:Tfu_2632 30S ribosomal protein S8; PFAM: ribosomal protein S8; SPTR: C1YIT5 SSU ribosomal protein S8P; PFAM: Ribosomal protein S8
YP_003683025.1	COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR000702:IPR002358:IPR020040:IPR019906; KEGG: tfu:Tfu_2631 50S ribosomal protein L6P; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: C1YIT4 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type
YP_003683026.1	COGs: COG0256 Ribosomal protein L18; InterPro IPR005484:IPR004389; KEGG: sro:Sros_1102 LSU ribosomal protein L18P; PFAM: ribosomal protein L18P/L5E; SPTR: C1YIT3 LSU ribosomal protein L18P; TIGRFAM: ribosomal protein L18; PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type
YP_003683027.1	COGs: COG0098 Ribosomal protein S5; InterProIPR005712:IPR020568:IPR014720:IPR013810:IPR 014721:IPR018192:IPR005324; KEGG: tfu:Tfu_2629 30S ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein; SPTR: C1YIT2 SSU ribosomal protein S5P; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type
YP_003683028.1	InterPro IPR000517:IPR016082:IPR005996; KEGG: tfu:Tfu_2628 50S ribosomal protein L30P; PFAM: ribosomal protein L30; SPTR: C1YIT1 LSU ribosomal protein L30P; TIGRFAM: ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle
YP_003683029.1	COGs: COG0200 Ribosomal protein L15; InterPro IPR001196:IPR005749; KEGG: tfu:Tfu_2627 50S ribosomal protein L15; PFAM: ribosomal protein L15; SPTR: C1YIT0 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle
YP_003683030.1	COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: tfu:Tfu_2626 preprotein translocase subunit SecY; PFAM: SecY protein; SPTR: C1YIS9 Protein translocase subunit secY/sec61 alpha; TIGRFAM: preprotein translocase, SecY subunit; PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit
YP_003683031.1	COGs: COG0563 Adenylate kinase and related kinase; InterPro IPR006259:IPR000850:IPR007862; KEGG: tcu:Tcur_4300 adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein; SPTR: C1YIS8 Adenylate kinase; TIGRFAM: adenylate kinase; PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases
YP_003683032.1	COGs: COG0024 Methionine aminopeptidase; InterPro IPR000994:IPR001714:IPR002467; KEGG: tfu:Tfu_2624 methionine aminopeptidase, type I; PFAM: peptidase M24; PRIAM: Methionyl aminopeptidase; SPTR: C1YIS7 Methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_003683033.1	InterPro IPR012551; KEGG: sro:Sros_1109 hypothetical protein; PFAM: protein of unknown function DUF1707; SPTR: C1YIS6  uncharacterized protein; PFAM: Domain of unknown function (DUF1707)
YP_003683034.1	COGs: COG0361 Translation initiation factor 1 (IF-1); InterPro IPR004368:IPR006196:IPR016027:IPR012340; KEGG: tfu:Tfu_2622 translation initiation factor IF-1; PFAM: S1 IF1 family protein; SPTR: C1YIS5 Bacterial translation initiation factor 1 (BIF-1); TIGRFAM: translation initiation factor IF-1; PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1
YP_003683035.1	InterPro IPR000473; KEGG: tcu:Tcur_4294 ribosomal protein L36; PFAM: ribosomal protein L36; SPTR: D1A351 Ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type
YP_003683036.1	COGs: COG0099 Ribosomal protein S13; InterPro IPR010979:IPR001892:IPR018269:IPR019980; KEGG: tfu:Tfu_2620 30S ribosomal protein S13; PFAM: ribosomal protein S13; SPTR: C1YIS4 30S ribosomal protein; TIGRFAM: 30S ribosomal protein S13; PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13
YP_003683037.1	COGs: COG0100 Ribosomal protein S11; InterPro IPR001971:IPR019981:IPR018102; KEGG: tfu:Tfu_2619 30S ribosomal protein S11; PFAM: ribosomal protein S11; SPTR: C1YIS3 SSU ribosomal protein S11P; TIGRFAM: 30S ribosomal protein S11; PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11
YP_003683038.1	COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; InterProIPR011260:IPR011262:IPR011773:IPR011263:IPR 011261:IPR009025; KEGG: tfu:Tfu_2618 DNA-directed RNA polymerase subunit alpha; PFAM: RNA polymerase insert; RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; SMART: RNA polymerase RpoA/D/Rpb3-type; SPTR: C1YIS2 DNA-directed RNA polymerase subunit alpha; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type
YP_003683039.1	COGs: COG0203 Ribosomal protein L17; InterPro IPR000456; KEGG: tfu:Tfu_2617 50S ribosomal protein L17; PFAM: ribosomal protein L17; SPTR: C1YIS1 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17
YP_003683040.1	COGs: COG0101 Pseudouridylate synthase; InterProIPR001406:IPR020095:IPR020094:IPR020097:IPR 020103; KEGG: tfu:Tfu_2616 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; PRIAM: tRNA-pseudouridine synthase I; SPTR: C1YIS0 Pseudouridylate synthase; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I
YP_003683041.1	COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR020084:IPR015797:IPR000086; KEGG: kse:Ksed_13920 ADP-ribose pyrophosphatase; PFAM: NUDIX hydrolase; SPTR: C1YIR9 ADP-ribose pyrophosphatase; PFAM: Hydrolase of X-linked nucleoside diphosphate N terminal; NUDIX domain
YP_003683042.1	KEGG: tfu:Tfu_2615 hypothetical protein; SPTR: C1YIR8  uncharacterized protein
YP_003683043.1	KEGG: afw:Anae109_4212 LigA; SPTR: C1YIR7  uncharacterized protein
YP_003683044.1	COGs: COG0102 Ribosomal protein L13; InterPro IPR005822:IPR005823; KEGG: tfu:Tfu_2614 50S ribosomal protein L13; PFAM: ribosomal protein L13; SPTR: Q47LM5 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type
YP_003683045.1	COGs: COG0103 Ribosomal protein S9; InterPro IPR020574:IPR020568:IPR014721:IPR000754; KEGG: tfu:Tfu_2613 30S ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: C1YIR5 30S ribosomal protein S9; PFAM: Ribosomal protein S9/S16
YP_003683046.1	COGs: COG1109 Phosphomannomutase; InterProIPR006352:IPR005841:IPR016066:IPR016055:IPR 005844:IPR005845:IPR005846:IPR005843; KEGG: tcu:Tcur_4282 phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; PRIAM: Phosphoglucosamine mutase; SPTR: C1YIR4 Phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase
YP_003683047.1	COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR004654:IPR000600; KEGG: tfu:Tfu_0273 glucokinase; PFAM: ROK family protein; SPTR: C1YIR3 Glucokinase; TIGRFAM: glucokinase, ROK family; PFAM: ROK family; TIGRFAM: ROK family protein ( glucokinase)
YP_003683048.1	InterPro IPR008538; KEGG: tcu:Tcur_3383 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: C1YIR2  uncharacterized protein; PFAM: Protein of unknown function (DUF820)
YP_003683049.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: tfu:Tfu_0275  short chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YIR1  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003683050.1	COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR018376:IPR001753; KEGG: tfu:Tfu_0276 enoyl-CoA hydratase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: C1YIR0 Short chain enoyl-CoA hydratase; PFAM: Enoyl-CoA hydratase/isomerase family
YP_003683051.1	COGs: COG1887  glycosyl/glycerophosphate transferase involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC; InterPro IPR001173:IPR007554; KEGG: sco:SCO2590 glycosyltransferase; PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; glycosyl transferase family 2; SPTR: C1YIQ9 Glycosyl/glycerophosphate transferase, teichoic acid biosynthesis; PFAM: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase; Glycosyl transferase family 2
YP_003683052.1	COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR005886:IPR002198:IPR016040:IPR001509; KEGG: tfu:Tfu_2591 UDP-galactose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YIQ8 UDP-galactose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase
YP_003683053.1	KEGG: hypothetical protein; SPTR: C1YIQ7  uncharacterized protein
YP_003683054.1	COGs: COG1953 Cytosine/uracil/thiamine/allantoin permease; InterPro IPR012681:IPR016160:IPR001248; KEGG: sgr:SGR_1229 cytosine/purines/uracil/thiamine/allantoin permease family protein; PFAM: permease for cytosine/purines uracil thiamine allantoin; SPTR: C1YIQ6 NCS1 nucleoside transporter-like protein; TIGRFAM: NCS1 nucleoside transporter family; PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: NCS1 nucleoside transporter family
YP_003683055.1	COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048; KEGG: sgr:SGR_1230  N5, N10-methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like, subgroup; SPTR: C1YI51 Methylenetetrahydromethanopterin reductase; PFAM: Luciferase-like monooxygenase
YP_003683056.1	COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR011778:IPR006680:IPR011059; KEGG: sgr:SGR_1231 phenylhydantoinase; PFAM: amidohydrolase; SPTR: C1YI50 Dihydropyrimidinase; TIGRFAM: dihydropyrimidinase; PFAM: Amidohydrolase family; TIGRFAM: D-hydantoinase
YP_003683057.1	COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: sco:SCO6411 hydrolase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: C1YI49 Predicted amidohydrolase; PFAM: Carbon-nitrogen hydrolase
YP_003683058.1	KEGG: GF15354 gene product from transcript GF15354-RA; SPTR: C1YI48  uncharacterized protein
YP_003683059.1	InterPro IPR008254; KEGG: tfu:Tfu_0321 hypothetical protein; SPTR: C1YI47 Multimeric flavodoxin WrbA; PFAM: NADPH-dependent FMN reductase
YP_003683060.1	COGs: COG4262 spermidine synthase with an N-terminal membrane domain; InterPro IPR016196:IPR001045; KEGG: tfu:Tfu_2234 spermidine synthase; PFAM: Spermine synthase; SPTR: C1YI46 Spermidine synthase; PFAM: Spermine/spermidine synthase; TIGRFAM: spermidine synthase
YP_003683061.1	InterPro IPR007140; KEGG: tfu:Tfu_2235 hypothetical protein; PFAM: protein of unknown function DUF350; SPTR: C1YI45  uncharacterized protein; PFAM: Domain of Unknown Function (DUF350)
YP_003683062.1	KEGG: hypothetical protein LOC100207678; SPTR: C1YI44  uncharacterized protein
YP_003683063.1	KEGG: tfu:Tfu_2237 hypothetical protein; SPTR: C1YI43  uncharacterized protein; PFAM: Protein of unknown function DUF2617
YP_003683064.1	KEGG: tfu:Tfu_2238 hypothetical protein; SPTR: C1YI42  uncharacterized protein
YP_003683065.1	COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: tfu:Tfu_0354 3-mercaptopyruvate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: C1YI41 Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain
YP_003683066.1	KEGG: tfu:Tfu_0355  integral membrane protein; SPTR: C1YI40  uncharacterized protein
YP_003683067.1	KEGG: tfu:Tfu_0356  integral membrane protein; SPTR: C1YI39  uncharacterized protein
YP_003683068.1	KEGG: bcv:Bcav_1279 hypothetical protein; SPTR: C1YI38  uncharacterized protein; PFAM: Telomeric repeat-binding factor 2
YP_003683069.1	InterPro IPR008613; KEGG: tfu:Tfu_0723 hypothetical protein; PFAM: Excalibur domain protein; SPTR: C1YI37  calcium-binding protein; PFAM: Excalibur calcium-binding domain
YP_003683070.1	InterPro IPR002477:IPR002502; KEGG: tfu:Tfu_2914 hypothetical protein; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; Peptidoglycan-binding domain 1 protein; SPTR: C1YI36 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase
YP_003683071.1	COGs: COG0063 sugar kinase; InterPro IPR004443:IPR017953:IPR000631; KEGG: tfu:Tfu_2608 hypothetical protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; SPTR: C1YI35 YjeF-like protein, hydroxyethylthiazole kinase-related; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: Carbohydrate kinase; YjeF-related protein N-terminus; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related
YP_003683072.1	KEGG: sro:Sros_6081 phenylalanine--tRNA ligase; SPTR: C1YI34  uncharacterized protein
YP_003683073.1	InterPro IPR020084:IPR000086:IPR015797; KEGG: cai:Caci_7624 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: C1YI33 ADP-ribose pyrophosphatase; PFAM: NUDIX domain
YP_003683074.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: cai:Caci_6235 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: C1YI32 Transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003683075.1	KEGG: saq:Sare_2473 hypothetical protein; SPTR: C1YI31  uncharacterized protein
YP_003683076.1	KEGG: saq:Sare_2472 hypothetical protein; SPTR: C1YI30  uncharacterized protein
YP_003683077.1	InterPro IPR011991; KEGG: ccs:CCNA_03498 transcriptional regulator, MarR/EmrR family protein; SPTR: C1YI29  uncharacterized protein
YP_003683078.1	KEGG: ach:Achl_2691 hypothetical protein; SPTR: C1YI28  uncharacterized protein
YP_003683079.1	KEGG: tfu:Tfu_2607 hypothetical protein; SPTR: C1YI27  uncharacterized protein
YP_003683080.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006655:IPR009010:IPR006657:IPR006656; KEGG: tfu:Tfu_0340 trimethylamine-N-oxide reductase (cytochrome c); PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: C1YI26 Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases
YP_003683081.1	COGs: COG2301 Citrate lyase beta subunit; InterPro IPR015813:IPR005000:IPR011206; KEGG: tfu:Tfu_0341 citryl-CoA lyase; PFAM: HpcH/HpaI aldolase; PRIAM: Citrate (pro-3S)-lyase; SPTR: C1YI25 Citrate lyase beta subunit; PFAM: HpcH/HpaI aldolase/citrate lyase family
YP_003683082.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR005829:IPR001789:IPR001867; KEGG: tfu:Tfu_0343 response regulator receiver; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: C1YI24 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003683083.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR003594:IPR009082:IPR003660:IPR003661:IPR 004358:IPR005467; KEGG: tfu:Tfu_0344 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: C1YI23 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003683084.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sro:Sros_1905 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: C1YI22 Glycosyltransferase; PFAM: Glycosyl transferases group 1
YP_003683085.1	COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR009003:IPR001478:IPR001254:IPR001940; KEGG: tfu:Tfu_0353 trypsin-like serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: C1YI21 Trypsin-like serine protease with C-terminal PDZ domain; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF)
YP_003683086.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR011991:IPR011006:IPR016032:IPR000792:IPR 001789; KEGG: tfu:Tfu_0288 LuxR response regulator receiver; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YI20 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003683087.1	COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR003594:IPR003018:IPR010822:IPR001932; KEGG: tfu:Tfu_0287 protein phosphatase 2C-like protein; PFAM: Stage II sporulation E family protein; GAF domain protein; ATP-binding region ATPase domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; SPTR: C1YI19 Serine phosphatase RsbU, regulator of sigma subunit; PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Stage II sporulation protein E (SpoIIE)
YP_003683088.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR009082:IPR003660:IPR001789:IPR003594:IPR 003661:IPR005467:IPR011006:IPR003018:IPR004358; KEGG: tfu:Tfu_0286 GAF sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase HAMP region domain protein; histidine kinase A domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; histidine kinase HAMP region domain protein; GAF domain protein; SPTR: C1YI18 Sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain
YP_003683089.1	COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR011006:IPR001789; KEGG: tfu:Tfu_0285 response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: C1YI17 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; PFAM: Response regulator receiver domain
YP_003683090.1	InterPro IPR013656:IPR003018:IPR000014; KEGG: tfu:Tfu_0292 PAS; PFAM: GAF domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; SPTR: C1YI16 GAF domain-containing protein; PFAM: GAF domain
YP_003683091.1	InterPro IPR011991:IPR011006:IPR005561; KEGG: tfu:Tfu_0293 hypothetical protein; PFAM: ANTAR domain protein; SPTR: C1YI15 Response regulator with  antiterminator output domain; PFAM: ANTAR domain
YP_003683092.1	COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645:IPR003658; KEGG: tfu:Tfu_0294 anti-sigma factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: C1YI14 Anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_003683093.1	InterPro IPR003594; KEGG: tcu:Tcur_3862  anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: C1YI13 Anti-sigma regulatory factor (Ser/Thr protein kinase)
YP_003683094.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: tfu:Tfu_0295 hypothetical protein; PFAM: glycosyl transferase group 1; SPTR: C1YI12 Glycosyltransferase; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1
YP_003683095.1	COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR001932; KEGG: tfu:Tfu_0297 protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; SPTR: C1YI11 Serine/threonine protein phosphatase; PFAM: Protein phosphatase 2C
YP_003683096.1	COGs: COG2372 conserved hypothetical protein homolog of Cu resistance protein CopC; InterPro IPR014755:IPR014756:IPR007348; KEGG: tfu:Tfu_0298 Cu resistance protein CopC; PFAM: copper resistance protein CopC; SPTR: C1YI10 Uncharacterized protein similar to copper resistance protein CopC; PFAM: Copper resistance protein CopC
YP_003683097.1	InterPro IPR003482; KEGG: tfu:Tfu_0299 regulatory protein; PFAM: transcription factor WhiB; SPTR: C1YIQ5 Transcription factor WhiB; PFAM: Transcription factor WhiB
YP_003683098.1	InterPro IPR016181:IPR012772:IPR000182; KEGG: tfu:Tfu_0300  acetyltransferase; PFAM: GCN5-related N-acetyltransferase; PRIAM: Diaminobutyrate acetyltransferase; SPTR: C1YIQ4 Diaminobutyrate acetyltransferase; TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase; PFAM: Acetyltransferase (GNAT) family; TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase
YP_003683099.1	COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterProIPR015424:IPR005814:IPR004637:IPR012773:IPR 015421; KEGG: tfu:Tfu_0301 diaminobutyrate--2-oxoglutarate aminotransferase; PFAM: aminotransferase class-III; SPTR: C1YIQ3 Diaminobutyrate aminotransferase; TIGRFAM: 2,4-diaminobutyrate 4-transaminase; diaminobutyrate/2-oxoglutarate aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase
YP_003683100.1	InterPro IPR011051:IPR010462; KEGG: tfu:Tfu_0302 L-ectoine synthase; PFAM: Ectoine synthase; PRIAM: Ectoine synthase; SPTR: C1YIQ2 Ectoine synthase; PFAM: Ectoine synthase
YP_003683101.1	COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR014337:IPR001638; KEGG: tfu:Tfu_0303 extracellular solute-binding; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: C1YIQ1 Amino acid ABC transporter substrate-binding protein, PAAT family; TIGRFAM: ectoine/hydroxyectoine ABC transporter solute-binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: ectoine/hydroxyectoine ABC transporter solute-binding protein
YP_003683102.1	COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR014342:IPR000515; KEGG: tfu:Tfu_0304 amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YIQ0 Amino acid ABC transporter membrane protein 1, PAAT family; TIGRFAM: ectoine/hydroxyectoine ABC transporter, permease protein EhuC; polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; ectoine/hydroxyectoine ABC transporter, permease protein EhuC
YP_003683103.1	COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR014341:IPR010065:IPR000515; KEGG: tfu:Tfu_0305 amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YIP9 Amino acid ABC transporter membrane protein 2, PAAT family; TIGRFAM: ectoine/hydroxyectoine ABC transporter, permease protein EhuD; polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; ectoine/hydroxyectoine ABC transporter, permease protein EhuD
YP_003683104.1	COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439:IPR014343; KEGG: tfu:Tfu_0306 ABC-type polar amino acid transport system ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1YIP8 Amino acid ABC transporter ATP-binding protein, PAAT family; TIGRFAM: ectoine/hydroxyectoine ABC transporter, ATP-binding protein; PFAM: ABC transporter; TIGRFAM: ectoine/hydroxyectoine ABC transporter, ATP-binding protein
YP_003683105.1	InterPro IPR003675; KEGG: sro:Sros_6387 hypothetical protein; PFAM: Abortive infection protein; SPTR: C1YIP7 CAAX amino terminal protease family; PFAM: CAAX amino terminal protease family
YP_003683106.1	COGs: COG0855 Polyphosphate kinase; InterPro IPR003414; KEGG: tfu:Tfu_0323 polyphosphate kinase; PFAM: Polyphosphate kinase; PRIAM: Polyphosphate kinase; SPTR: C1YIP6 Polyphosphate kinase; PFAM: Polyphosphate kinase
YP_003683107.1	InterPro IPR000086:IPR015797:IPR020084:IPR013078; KEGG: tfu:Tfu_0324  MutT family protein; PFAM: NUDIX hydrolase; Phosphoglycerate mutase; SPTR: C1YIP5 Predicted NTP pyrophosphohydrolase; PFAM: NUDIX domain
YP_003683108.1	InterPro IPR019587; KEGG: tfu:Tfu_0325 hypothetical protein; PFAM: Polyketide cyclase/dehydrase; SPTR: C1YIP4 Activator of Hsp90 ATPase-like protein; PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_003683109.1	KEGG: hypothetical protein LOC100013262; SPTR: Q5LKH1  uncharacterized protein
YP_003683110.1	InterPro IPR018486; KEGG: tfu:Tfu_0332  integral membrane protein; SPTR: C1YIP2  uncharacterized protein
YP_003683111.1	COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645:IPR003658; KEGG: tfu:Tfu_0333 anti-sigma factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: C1YIP1 Anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_003683112.1	KEGG: tfu:Tfu_0334 hypothetical protein; SPTR: C1YIP0  uncharacterized protein
YP_003683113.1	COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: tfu:Tfu_0399  fatty acid-CoA racemase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: C1YIN9 Predicted acyl-CoA transferase/carnitine dehydratase; PFAM: CoA-transferase family III
YP_003683114.1	InterPro IPR011098; KEGG: kra:Krad_1044 transglycosylase domain protein; SPTR: C1YIN8  uncharacterized protein; PFAM: G5 domain
YP_003683115.1	COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); InterPro IPR020596:IPR011530:IPR001737:IPR020598; KEGG: tfu:Tfu_0405 dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase-like; SPTR: C1YIN7 Dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase
YP_003683116.1	KEGG: tfu:Tfu_2585 hypothetical protein; SPTR: C1YIN6  uncharacterized protein
YP_003683117.1	InterPro IPR007168; KEGG: tfu:Tfu_2584 hypothetical protein; PFAM: PspC domain protein; SPTR: C1YIN5  stress-responsive transcriptional regulator; PFAM: PspC domain
YP_003683118.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR007168; KEGG: tfu:Tfu_2583  two-component system sensor kinase; PFAM: PspC domain protein; ATP-binding region ATPase domain protein; SPTR: C1YIN4 Signal transduction histidine kinase, COG4585; PFAM: PspC domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003683119.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR011991:IPR011006:IPR016032:IPR000792:IPR 001789; KEGG: tfu:Tfu_2582 LuxR response regulator receiver; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C1YIN3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003683120.1	COGs: COG1957 Inosine-uridine nucleoside N-ribohydrolase; InterPro IPR001910:IPR015910; KEGG: tfu:Tfu_2581 inosine-uridine preferring nucleoside hydrolase; PFAM: Inosine/uridine-preferring nucleoside hydrolase; SPTR: C1YIN2 Inosine-uridine nucleoside N-ribohydrolase; PFAM: Inosine-uridine preferring nucleoside hydrolase
YP_003683121.1	COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR005751:IPR000212:IPR014016:IPR014017; KEGG: tfu:Tfu_2580 ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; SPTR: C1YIN1 ATP-dependent DNA helicase PcrA; TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase PcrA
YP_003683122.1	SPTR: C1YSD0  uncharacterized protein
YP_003683123.1	KEGG: tfu:Tfu_3074 hypothetical protein; SPTR: C1YSC9  uncharacterized protein
YP_003683124.1	InterPro IPR010982:IPR001387; KEGG: tfu:Tfu_0216 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YSC8  uncharacterized protein; PFAM: Helix-turn-helix
YP_003683125.1	KEGG: tfu:Tfu_3072 hypothetical protein; SPTR: C1YSC7  uncharacterized protein
YP_003683126.1	InterPro IPR003482; KEGG: tfu:Tfu_0110  regulatory protein; PFAM: transcription factor WhiB; SPTR: C1YSC6 Transcription factor WhiB; PFAM: Transcription factor WhiB
YP_003683127.1	InterPro IPR012551; KEGG: tfu:Tfu_3071 hypothetical protein; PFAM: protein of unknown function DUF1707; SPTR: C1YSC5  uncharacterized protein; PFAM: Domain of unknown function (DUF1707)
YP_003683128.1	KEGG: tfu:Tfu_3070 hypothetical protein; SPTR: C1YSC4  uncharacterized protein
YP_003683129.1	COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130:IPR015891:IPR000215; KEGG: tfu:Tfu_3069 peptidylprolyl isomerase; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; PRIAM: Peptidylprolyl isomerase; SPTR: C1YSC3 Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_003683130.1	COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: tfu:Tfu_3068 rhomboid family protein; PFAM: Rhomboid family protein; SPTR: C1YSC1 Uncharacterized membrane protein; PFAM: Rhomboid family
YP_003683131.1	InterPro IPR009619; KEGG: sro:Sros_0107 hypothetical protein; PFAM: protein of unknown function UPF0233; SPTR: C1YSC0 Uncharacterized protein family (UPF0233); PFAM: Uncharacterised protein family (UPF0233)
YP_003683132.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR008271:IPR011009:IPR005543:IPR017442:IPR 000719:IPR017441; KEGG: tfu:Tfu_3066 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: PASTA domain containing protein; SPTR: C1YSB9 Protein kinase family protein with PASTA domain; PFAM: Protein kinase domain; PASTA domain
YP_003683133.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR011009:IPR017441:IPR008271:IPR017442:IPR 020635:IPR002290:IPR000719; KEGG: tfu:Tfu_3065 tyrosine protein kinase:serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: C1YSB8 Protein kinase family protein; PFAM: Protein kinase domain
YP_003683134.1	COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR001460:IPR012338; KEGG: tfu:Tfu_3064 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: C1YSB7 Cell elongation-specific peptidoglycan D,D-transpeptidase; PFAM: Penicillin binding protein transpeptidase domain
YP_003683135.1	COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: tfu:Tfu_3063 FtsW/RodA/SpoVE family cell cycle protein; PFAM: cell cycle protein; SPTR: C1YSB6 Cell elongation-specific peptidoglycan biosynthesis regulator RodA; PFAM: Cell cycle protein
YP_003683136.1	COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR001932:IPR014045; KEGG: tfu:Tfu_3062 protein phosphatase 2C-like; PFAM: Protein phosphatase 2C-like; PRIAM: Phosphoprotein phosphatase; SMART: protein phosphatase 2C domain protein; SPTR: C1YSB5 Serine/threonine protein phosphatase; PFAM: Protein phosphatase 2C
YP_003683137.1	COGs: COG1716 FOG: FHA domain; InterPro IPR000253:IPR008984; KEGG: tfu:Tfu_3061 FHA domain-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: C1YSB4 FHA domain-containing protein; PFAM: FHA domain
YP_003683138.1	COGs: COG1716 FOG: FHA domain; InterPro IPR000253:IPR008984; KEGG: tfu:Tfu_3060 FHA domain-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: C1YSB3 FHA domain-containing protein; PFAM: Protein of unknown function (DUF2662); FHA domain
YP_003683139.1	InterPro IPR014710:IPR011051:IPR013096; KEGG: sgr:SGR_6503 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: C1YSB2 Cupin domain-containing protein; PFAM: Cupin domain
YP_003683140.1	KEGG: aau:AAur_pTC20130 hypothetical protein; SPTR: C1YSB1  uncharacterized protein
YP_003683141.1	COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: ara:Arad_7744 oligopeptide ABC transporter; PFAM: extracellular solute-binding protein family 5; SPTR: C1YSB0 ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_003683142.1	COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterProIPR017871:IPR003593:IPR010066:IPR013563:IPR 003439; KEGG: rle:pRL100280  ATP-binding ABC transporter; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: C1YSA9 Oligopeptide/dipeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_003683143.1	COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterProIPR017871:IPR010066:IPR003439:IPR013563:IPR 003593; KEGG: trq:TRQ2_0507 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: C1YSA8 Oligopeptide/dipeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_003683144.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: bcv:Bcav_0597 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YSA7 ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003683145.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: rle:pRL100277  permease component of ABC transporter; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YSA6 ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003683146.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR016040:IPR000683:IPR004104; KEGG: aau:AAur_pTC20131 oxidoreductase family protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: C1YSA5 Predicted dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain
YP_003683147.1	COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR002772:IPR001764:IPR017853; KEGG: sco:SCO0293 beta-xylosidase; PFAM: glycoside hydrolase family 3 domain protein; SPTR: C1YSA4 Beta-glucosidase-like glycosyl hydrolase; PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain
YP_003683148.1	COGs: COG0819  transcription activator; InterPro IPR016084:IPR004305; KEGG: tcu:Tcur_0089 transcriptional activator, TenA family; PFAM: TENA/THI-4 domain protein; SPTR: C1YSA3  transcription activator; PFAM: TENA/THI-4/PQQC family
YP_003683149.1	InterPro IPR000691; KEGG: tfu:Tfu_3059 hypothetical protein; PFAM: proteinase inhibitor I16 subtilisin-type inhibitor; SPTR: C1YSA2 Subtilisin inhibitor-like protein; PFAM: Subtilisin inhibitor-like
YP_003683150.1	COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: tfu:Tfu_3058 rhodanese-like; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: C1YSA1 Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain
YP_003683151.1	COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR003594:IPR009082:IPR000014:IPR013767:IPR 003018:IPR013656:IPR003661:IPR004358:IPR005467; KEGG: tcu:Tcur_0094 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; GAF domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing protein; SPTR: C1YSA0 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_003683152.1	InterPro IPR003594; KEGG: tfu:Tfu_3056  regulatory protein; PFAM: ATP-binding region ATPase domain protein; SPTR: C1YS99 Histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003683153.1	COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645:IPR003658; KEGG: tfu:Tfu_3055 anti-sigma factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: C1YS98 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor); TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_003683154.1	InterPro IPR001173; KEGG: tfu:Tfu_3054 glycosyltransferase involved in cell wall biogenesis; PFAM: glycosyl transferase family 2; SPTR: C1YS97 Glycosyl transferase; PFAM: Glycosyl transferase family 2
YP_003683155.1	KEGG: tcu:Tcur_0120 hypothetical protein; SPTR: C1YS96  uncharacterized protein
YP_003683156.1	COGs: COG0077 Prephenate dehydratase; InterPro IPR018528:IPR001086:IPR002912; KEGG: tfu:Tfu_3053 prephenate dehydratase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; PRIAM: Prephenate dehydratase; SPTR: C1YS95 Prephenate dehydratase; PFAM: Prephenate dehydratase; ACT domain
YP_003683157.1	KEGG: gbe:GbCGDNIH1_1846 mechanosensitive ion channel; SPTR: C1YS94  uncharacterized protein
YP_003683158.1	COGs: COG0172 Seryl-tRNA synthetase; InterProIPR015866:IPR010978:IPR002317:IPR002314:IPR 018156:IPR006195; KEGG: tfu:Tfu_0031 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA ligase; SPTR: C1YS93 Seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase
YP_003683159.1	InterPro IPR019695; KEGG: sma:SAV_4370 hypothetical protein; PFAM: Protein of unknown function DUF2587; SPTR: C1YS92  uncharacterized protein; PFAM: Protein of unknown function (DUF2587)
YP_003683160.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterProIPR016040:IPR013149:IPR014189:IPR011032:IPR 013154; KEGG: tfu:Tfu_0072  quinone oxidoreductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: C1YS91  NAD(P)H quinone oxidoreductase, PIG3 family; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM:  NAD(P)H quinone oxidoreductase, PIG3 family
YP_003683161.1	COGs: COG0455 ATPase involved in chromosome partitioning; KEGG: tcu:Tcur_0128 ATPase involved in chromosome partitioning-like protein; SPTR: C1YS90 ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_003683162.1	InterPro IPR006015:IPR014729:IPR006016; KEGG: tfu:Tfu_1412 hypothetical protein; PFAM: UspA domain protein; SPTR: C1YS89 Universal stress protein UspA-like protein; PFAM: Universal stress protein family
YP_003683163.1	COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR014729:IPR006016:IPR006015; KEGG: tfu:Tfu_3032 hypothetical protein; PFAM: UspA domain protein; SPTR: C1YS88 Universal stress protein UspA-like protein; PFAM: Universal stress protein family
YP_003683164.1	InterPro IPR004360; KEGG: sro:Sros_7081 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YS87 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003683165.1	KEGG: cur:cur_1791  secreted protein; SPTR: C1YS86  uncharacterized protein
YP_003683166.1	InterPro IPR004919; KEGG: shl:Shal_3269 hypothetical protein; PFAM: protein of unknown function DUF262; SPTR: B5JL60  uncharacterized protein; PFAM: Protein of unknown function DUF262
YP_003683167.1	InterPro IPR003382; KEGG: tfu:Tfu_0396 hypothetical protein; PFAM: flavoprotein; SPTR: Q47SY3  uncharacterized protein; PFAM: Flavoprotein
YP_003683168.1	KEGG: tcu:Tcur_2078 hypothetical protein; SPTR: C1YS85  uncharacterized protein
YP_003683169.1	SPTR: C1GV16  uncharacterized protein
YP_003683170.1	KEGG: fra:Francci3_3814 hypothetical protein; SPTR: C1YS84  uncharacterized protein
YP_003683171.1	KEGG: tfu:Tfu_2942 hypothetical protein; SPTR: C1YS83  uncharacterized protein
YP_003683172.1	COGs: COG2188 Transcriptional regulators; InterPro IPR011991:IPR000524:IPR011663; KEGG: tfu:Tfu_2943 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C1YS82 Transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_003683173.1	KEGG: tcu:Tcur_0045 hypothetical protein; SPTR: C1YS81  uncharacterized protein
YP_003683174.1	KEGG: cte:CT2155 ribosome biogenesis GTP-binding protein YsxC; SPTR: C1YS80  uncharacterized protein
YP_003683175.1	COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543; KEGG: sro:Sros_0152 DNA segregation ATPase FtsK/SpoIIIE and related protein-like protein; PFAM: cell divisionFtsK/SpoIIIE; SPTR: C1YS79 DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: FtsK/SpoIIIE family
YP_003683176.1	KEGG: sgl:SG0082 hypothetical protein; SPTR: Q2NWW8  uncharacterized protein
YP_003683177.1	KEGG: tcu:Tcur_0041 hypothetical protein; SPTR: C1YS78  uncharacterized protein
YP_003683178.1	InterPro IPR009061; KEGG: svi:Svir_23900 MerR family regulatory protein; SPTR: C1YS77  uncharacterized protein
YP_003683179.1	COGs: COG4974 Site-specific recombinase XerD; InterPro IPR013762:IPR002104:IPR011010; KEGG: svi:Svir_23910 site-specific recombinase XerD; PFAM: integrase family protein; SPTR: C1YS76 Site-specific recombinase XerD; PFAM: Phage integrase family
YP_003683180.1	KEGG: sco:SCO1317 hypothetical protein; SPTR: C1YS75 Uncharacterized protein, possibly involved in aromatic compounds catabolism; TIGRFAM: uncharacterized domain 1
YP_003683181.1	COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001; KEGG: tfu:Tfu_0086 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III beta chain; SPTR: C1YS74 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit
YP_003683182.1	KEGG: tfu:Tfu_0094 hypothetical protein; SPTR: C1YS73  uncharacterized protein; PFAM: Protein of unknown function (DUF2786)
YP_003683183.1	KEGG: tfu:Tfu_0095 hypothetical protein; SPTR: C1YS72  uncharacterized protein
YP_003683184.1	InterPro IPR000086:IPR015797; KEGG: tfu:Tfu_0097 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: C1YS71 ADP-ribose pyrophosphatase; PFAM: NUDIX domain
YP_003683185.1	KEGG: hypothetical protein; SPTR: C1YS70  uncharacterized protein
YP_003683186.1	COGs: COG3629 DNA-binding transcriptional activator of the SARP family; InterProIPR011990:IPR016032:IPR001867:IPR005158:IPR 002182:IPR001440:IPR019734:IPR000767:IPR013026; KEGG: sgr:SGR_5285  AfsR-like transcriptional regulator; PFAM: transcriptional activator domain; transcriptional regulator domain protein; NB-ARC domain protein; TPR repeat-containing protein; SPTR: C1YS69 DNA-binding transcriptional activator of the SARP family; PFAM: Bacterial transcriptional activator domain; Transcriptional regulatory protein, C terminal; NB-ARC domain
YP_003683187.1	COGs: COG3662 conserved hypothetical protein; InterPro IPR018713; KEGG: tfu:Tfu_0824 hypothetical protein; PFAM: Protein of unknown function DUF2236; SPTR: C1YS68 Uncharacterized conserved protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2236)
YP_003683188.1	KEGG: cai:Caci_5180 hypothetical protein; SPTR: C1YS67  uncharacterized protein
YP_003683189.1	COGs: COG3397 conserved hypothetical protein; InterPro IPR017909:IPR004302; KEGG: sco:SCO0481 secreted chitin binding protein; PFAM: chitin-binding domain 3 protein; SPTR: C1YS66 Uncharacterized conserved protein; PFAM: Chitin binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003683190.1	COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR012338:IPR001466; KEGG: sro:Sros_2550 beta-lactamase class C and other penicillin binding protein-like protein; PFAM: beta-lactamase; SPTR: C1YS65 Penicillin-binding protein, beta-lactamase class C; PFAM: Beta-lactamase
YP_003683191.1	COGs: COG1408 phosphohydrolase; InterPro IPR004843; KEGG: tfu:Tfu_0107 hypothetical protein; PFAM: metallophosphoesterase; SPTR: C1YS64 Predicted phosphohydrolase; PFAM: Calcineurin-like phosphoesterase
YP_003683192.1	COGs: COG1610 conserved hypothetical protein; InterPro IPR003789:IPR019004; KEGG: tcu:Tcur_4920 YqeY family protein; PFAM: Protein of unknown function; SPTR: C1YS63 Uncharacterized conserved protein; PFAM: Yqey-like protein
YP_003683193.1	COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR012338:IPR001264:IPR001460:IPR005543; KEGG: tfu:Tfu_0109 PASTA; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; PASTA domain containing protein; SMART: PASTA domain containing protein; SPTR: C1YS62 Membrane carboxypeptidase (Penicillin-binding protein); PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; PASTA domain
YP_003683194.1	InterPro IPR003482; KEGG: tfu:Tfu_0110  regulatory protein; PFAM: transcription factor WhiB; SPTR: C1YS61 Transcription factor WhiB; PFAM: Transcription factor WhiB
YP_003683195.1	COGs: COG0003 ATPase involved in chromosome partitioning; InterPro IPR003348; KEGG: tfu:Tfu_0111  ion-transporting ATPase; PFAM: Anion-transporting ATPase; SPTR: C1YS60 Oxyanion-translocating ATPase; PFAM: Anion-transporting ATPase
YP_003683196.1	COGs: COG0003 ATPase involved in chromosome partitioning; KEGG: tcu:Tcur_4924 anion-transporting ATPase; SPTR: C1YS59  uncharacterized protein; PFAM: Anion-transporting ATPase
YP_003683197.1	KEGG: tfu:Tfu_0113 hypothetical protein; SPTR: C1YS58  uncharacterized protein
YP_003683198.1	COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR013813:IPR006175; KEGG: jde:Jden_0434 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: C1YS57  translation initiation inhibitor, yjgF family; PFAM: Endoribonuclease L-PSP
YP_003683199.1	InterPro IPR015797:IPR000086; KEGG: tfu:Tfu_0115 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: C1YS56 NUDIX family protein; PFAM: NUDIX domain
YP_003683200.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: tfu:Tfu_0116  hydrolase; SMART: beta-lactamase domain protein; SPTR: C1YS55 Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily
YP_003683201.1	COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterProIPR014710:IPR011991:IPR018490:IPR018488:IPR 000595:IPR001808:IPR002373:IPR012318; KEGG: tfu:Tfu_0117 cyclic nucleotide-binding: regulatory protein, Crp; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; SPTR: C1YS54 Transcriptional regulator; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain
YP_003683202.1	COGs: COG0177 EndoIII-related endonuclease; InterProIPR003583:IPR004036:IPR003265:IPR000445:IPR 004035:IPR003651:IPR005759:IPR011257; KEGG: tfu:Tfu_0118 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; iron-sulfur cluster loop; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD family protein; iron-sulfur cluster loop; Helix-hairpin-helix DNA-binding class 1; SPTR: C1YS53 Endonuclease III; DNA-(Apurinic or apyrimidinic site) lyase; TIGRFAM: endonuclease III; PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III
YP_003683203.1	InterPro IPR015797:IPR000086; KEGG: tfu:Tfu_0119 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: C1YS52 NTP pyrophosphohydrolase; PFAM: NUDIX domain
YP_003683204.1	InterPro IPR009003:IPR003825:IPR001254:IPR001940; KEGG: tfu:Tfu_0120  serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; Colicin V production protein; SPTR: C1YS51 Trypsin-like serine protease with C-terminal PDZ domain; PFAM: Trypsin; Colicin V production protein
YP_003683205.1	KEGG: tfu:Tfu_0121 hypothetical protein; SPTR: C1YS49 Anti-sigma regulatory factor (Ser/Thr protein kinase)
YP_003683206.1	COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645:IPR003658; KEGG: tfu:Tfu_0122 anti-sigma factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: C1YS48 Anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_003683207.1	COGs: COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster; InterProIPR011545:IPR001650:IPR014021:IPR018973:IPR 014001; KEGG: tfu:Tfu_0123 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; Protein of unknown function DUF1998; SMART: DEAD-like helicase ; helicase domain protein; SPTR: C1YS47 Helicase family protein with metal-binding cysteine cluster; PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase
YP_003683208.1	KEGG: fre:Franean1_0316 hypothetical protein; SPTR: C1YS46  uncharacterized protein
YP_003683209.1	KEGG: tfu:Tfu_0124 hypothetical protein; SPTR: C1YS45  uncharacterized protein
YP_003683210.1	KEGG: sco:SCO3551 membrane spanning protein; SPTR: C1YS44  uncharacterized protein
YP_003683211.1	KEGG: MTA2; hydroxyproline-rich glycoprotein; SPTR: C1YS43  uncharacterized protein
YP_003683212.1	InterPro IPR018076; KEGG: tfu:Tfu_0126  integral membrane protein; PFAM: Type II secretion system F domain; SPTR: C1YS42 Flp pilus assembly protein TadC; PFAM: Bacterial type II secretion system protein F domain
YP_003683213.1	COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: tfu:Tfu_0127  integral membrane protein; PFAM: Type II secretion system F domain; SPTR: C1YS41 Flp pilus assembly protein TadB; PFAM: Bacterial type II secretion system protein F domain
YP_003683214.1	COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR001482; KEGG: tfu:Tfu_0128 pilus assembly protein CpaF; PFAM: type II secretion system protein E; SPTR: C1YS40 Flp pilus assembly protein, ATPase CpaF; PFAM: Type II/IV secretion system protein
YP_003683215.1	COGs: COG0455 ATPase involved in chromosome partitioning; KEGG: tfu:Tfu_0129  septum site determining protein; SPTR: C1YS39 ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_003683216.1	KEGG: tfu:Tfu_0130 hypothetical protein; SPTR: C1YS38  uncharacterized protein
YP_003683217.1	COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR011904:IPR000873; KEGG: tcu:Tcur_4841 acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YS37 Acetyl-coenzyme A synthetase; TIGRFAM: acetate/CoA ligase; PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase
YP_003683218.1	InterPro IPR009937; KEGG: tfu:Tfu_0131 hypothetical protein; PFAM: protein of unknown function DUF1469; SPTR: C1YS36  uncharacterized protein; PFAM: Protein of unknown function (DUF1469)
YP_003683219.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000169:IPR000073:IPR005500:IPR000639; KEGG: tcu:Tcur_4844 alpha/beta hydrolase fold protein; PFAM: protein of unknown function DUF309; alpha/beta hydrolase fold; SPTR: C1YS35 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: Domain of unknown function (DUF309); alpha/beta hydrolase fold
YP_003683220.1	COGs: COG3808 Inorganic pyrophosphatase; InterPro IPR004131; KEGG: tfu:Tfu_0134 membrane-bound proton-translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase; PRIAM: Inorganic diphosphatase; SPTR: C1YS34 Vacuolar-type H(+)-translocating pyrophosphatase; TIGRFAM: V-type H(+)-translocating pyrophosphatase; PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase
YP_003683221.1	COGs: COG2062 Phosphohistidine phosphatase SixA; InterPro IPR013078; KEGG: tfu:Tfu_0135 hypothetical protein; PFAM: Phosphoglycerate mutase; SPTR: C1YS32 Phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA
YP_003683222.1	COGs: COG0560 Phosphoserine phosphatase; InterPro IPR006383:IPR004469:IPR005834; KEGG: tfu:Tfu_0136 phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; PRIAM: Phosphoserine phosphatase; SPTR: C1YVU2 Phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB
YP_003683223.1	InterPro IPR012551; KEGG: tfu:Tfu_0137 hypothetical protein; PFAM: protein of unknown function DUF1707; SPTR: C1YVU1  uncharacterized protein; PFAM: Predicted membrane protein (DUF2154); Domain of unknown function (DUF1707)
YP_003683224.1	COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR012338:IPR001466; KEGG: sro:Sros_8721 beta-lactamase class C and other penicillin binding protein-like protein; PFAM: beta-lactamase; SPTR: C1YVU0 Penicillin-binding protein, beta-lactamase class C; PFAM: Beta-lactamase
YP_003683225.1	KEGG: tcu:Tcur_4816 hypothetical protein; SPTR: C1YVT9  uncharacterized protein
YP_003683226.1	COGs: COG1119 ABC-type molybdenum transport system ATPase component/photorepair protein PhrA; InterPro IPR003593:IPR003439; KEGG: tfu:Tfu_0139 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1YVT8 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA; PFAM: ABC transporter
YP_003683227.1	COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001972:IPR001107; KEGG: ace:Acel_1156 SPFH domain-containing protein/band 7 family protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: C1YVT7 SPFH domain, Band 7 family protein; PFAM: SPFH domain / Band 7 family
YP_003683228.1	COGs: COG0730 permease; InterPro IPR002781; KEGG: tfu:Tfu_0140  integral membrane protein; PFAM: protein of unknown function DUF81; SPTR: C1YVT6 Predicted permease; PFAM: Sulfite exporter TauE/SafE
YP_003683229.1	COGs: COG1896 hydrolase of HD superfamily; InterPro IPR006674:IPR003607; KEGG: tfu:Tfu_0141 metal-dependent phosphohydrolase, HD region; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: C1YVT5 Predicted HD superfamily hydrolase
YP_003683230.1	KEGG: tfu:Tfu_0142 hypothetical protein; SPTR: C1YVT4  uncharacterized protein; PFAM: Prolyl oligopeptidase family
YP_003683231.1	COGs: COG1309 Transcriptional regulator; InterPro IPR001647:IPR012287:IPR009057; KEGG: tfu:Tfu_0143 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1YVT3 Transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family
YP_003683232.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016161:IPR015590:IPR016162; KEGG: sen:SACE_1997 aldehyde dehydrogenase, NAD-dependent; PFAM: Aldehyde Dehydrogenase; SPTR: C1YVT2 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family
YP_003683233.1	KEGG: mva:Mvan_2815 hypothetical protein; SPTR: C1YVT1  uncharacterized protein
YP_003683234.1	COGs: COG1816 Adenosine deaminase; InterPro IPR006330:IPR001365; KEGG: sen:SACE_2180 adenosine deaminase; PFAM: adenosine/AMP deaminase; PRIAM: Adenosine deaminase; SPTR: C1YVT0 Adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase
YP_003683235.1	InterPro IPR005528:IPR019948:IPR019931; KEGG: tfu:Tfu_0146 surface protein; PFAM: Gram-positive anchor; protein of unknown function DUF320; SPTR: C1YVS9 Small secreted domain-containing protein (DUF320); TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: Small secreted domain (DUF320); TIGRFAM: LPXTG-motif cell wall anchor domain
YP_003683236.1	COGs: COG3346 conserved hypothetical protein; InterPro IPR002994; KEGG: tfu:Tfu_0148 hypothetical protein; SPTR: C1YVS8 Uncharacterized conserved protein; PFAM: SURF1 family
YP_003683237.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: tfu:Tfu_0150 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: C1YVS7 Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain
YP_003683238.1	COGs: COG1859 RNA:NAD 2'-phosphotransferase; InterPro IPR002745; KEGG: sgr:SGR_3640 RNA 2'-phosphotransferase-like protein; PFAM: phosphotransferase KptA/Tpt1; SPTR: C1YVS6 RNA:NAD 2'-phosphotransferase; PFAM: RNA 2'-phosphotransferase, Tpt1 / KptA family
YP_003683239.1	InterPro IPR016181:IPR000182:IPR017255; KEGG: tcu:Tcur_0325 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YVS5 Acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_003683240.1	KEGG: saq:Sare_0437 hypothetical protein; SPTR: C1YVS4  uncharacterized protein; PFAM: Smr domain
YP_003683241.1	COGs: COG3324 protein related to lactoylglutathione lyase; InterPro IPR004360; KEGG: sco:SCO0265 hydroxylase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YVS3 Lactoylglutathione lyase family protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003683242.1	COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: oih:OB2666 AMP-binding enzyme; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YVS2 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme
YP_003683243.1	COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: sco:SCO4016 hypothetical protein; PFAM: amidohydrolase 2; SPTR: C1YVS1 Predicted TIM-barrel fold metal-dependent hydrolase, COG2159; PFAM: Amidohydrolase
YP_003683244.1	InterPro IPR000620; KEGG: msm:MSMEG_2639 integral membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: C1YVS0 Integral membrane protein DUF6; PFAM: EamA-like transporter family
YP_003683245.1	KEGG: sro:Sros_4659 hypothetical protein; SPTR: C1YVR9  uncharacterized protein
YP_003683246.1	InterPro IPR011701:IPR016196; KEGG: stp:Strop_2072 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YVR8 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily
YP_003683247.1	InterPro IPR018764; KEGG: sgr:SGR_5883 hypothetical protein; PFAM: Anti-sigma K factor RskA; SPTR: C1YVR7 Uncharacterized conserved protein; PFAM: Anti-sigma-K factor rskA
YP_003683248.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013324:IPR013249:IPR013325:IPR014284:IPR 007627; KEGG: sro:Sros_3290 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: C1YVR6 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003683249.1	COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: sro:Sros_0737 beta-Ig-H3/fasciclin; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; SPTR: C1YUI3 Secreted/surface protein with fasciclin-like repeats; PFAM: Fasciclin domain
YP_003683250.1	COGs: COG2041 Sulfite oxidase; InterPro IPR000572:IPR014756:IPR005066; KEGG: sro:Sros_1739 sulfite oxidase-like protein; PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; SPTR: C1YUI2 Sulfite oxidase-like oxidoreductase; PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain
YP_003683251.1	COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665:IPR006664; KEGG: tfu:Tfu_1564 outer membrane protein and related peptidoglycan-associated (LipO)proteins; PFAM: OmpA/MotB domain protein; SPTR: C1YUI1 Outer membrane protein/peptidoglycan-associated (Lipo)protein; PFAM: OmpA family
YP_003683252.1	KEGG: tfu:Tfu_1563 hypothetical protein; SPTR: C1YUI0  uncharacterized protein
YP_003683253.1	COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR012999:IPR013027:IPR006258:IPR004099:IPR 000815:IPR001327:IPR016156; KEGG: sro:Sros_0616 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: C1YUH9 Dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase
YP_003683254.1	COGs: COG0586 membrane-associated protein; KEGG: pac:PPA0408 hypothetical protein; SPTR: C1YUH8 Uncharacterized membrane-associated protein; PFAM: SNARE associated Golgi protein
YP_003683255.1	KEGG: tfu:Tfu_1533 hypothetical protein; SPTR: C1YUH7  uncharacterized protein
YP_003683256.1	KEGG: tcu:Tcur_2452 hypothetical protein; SPTR: C1YUH6  uncharacterized protein
YP_003683257.1	COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182:IPR016181; KEGG: saq:Sare_1041 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YUH5 Acetyltransferase, ribosomal protein N-acetylase; PFAM: Acetyltransferase (GNAT) family
YP_003683258.1	KEGG: similar to AGAP004367-PA; SPTR: C1YUH4  uncharacterized protein
YP_003683259.1	COGs: COG3387 Glucoamylase and related glycosyl hydrolase; InterPro IPR012341:IPR008928:IPR003337:IPR011613; KEGG: ami:Amir_0370 trehalose-phosphatase; PFAM: glycoside hydrolase 15-related; trehalose-phosphatase; SPTR: C1YUH3 Trehalose 6-phosphatase; PFAM: Glycosyl hydrolases family 15; Trehalose-phosphatase; TIGRFAM: trehalose-phosphatase
YP_003683260.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: cai:Caci_1627 two component transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; response regulator receiver; SMART: transcriptional regulator domain protein; response regulator receiver; SPTR: C1YUH2 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003683261.1	COGs: COG0787 Alanine racemase; InterPro IPR009006:IPR000821:IPR001608:IPR011079; KEGG: fal:FRAAL1122 alanine racemase; PFAM: alanine racemase domain protein; PRIAM: Alanine racemase; SPTR: C1YUH1 Alanine racemase; TIGRFAM: alanine racemase; PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase
YP_003683262.1	COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; InterProIPR013817:IPR013816:IPR016185:IPR000291:IPR 005905:IPR011127:IPR011095:IPR011761; KEGG: nfa:nfa42050 D-alanyl-alanine synthetase A; PFAM: D-alanine--D-alanine ligase domain protein; PRIAM: D-alanine--D-alanine ligase; SPTR: C1YUH0 D-alanine--D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase
YP_003683263.1	COGs: COG3963 Phospholipid N-methyltransferase; InterPro IPR013217; KEGG: tfu:Tfu_0154 phospholipid N-methyltransferase; PFAM: Methyltransferase type 12; SPTR: C1YUG9 Phospholipid N-methyltransferase; PFAM: Methyltransferase small domain
YP_003683264.1	COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198:IPR016040:IPR002347; KEGG: tfu:Tfu_0176  short chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YUG8  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003683265.1	COGs: COG0140 Phosphoribosyl-ATP pyrophosphohydrolase; InterPro IPR008179; KEGG: tfu:Tfu_0175 phosphoribosyl-ATP pyrophosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; SPTR: C1YUG7 Phosphoribosyl-ATP pyrophosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase
YP_003683266.1	COGs: COG0040 ATP phosphoribosyltransferase; InterProIPR015867:IPR011322:IPR018198:IPR013820:IPR 013115; KEGG: tfu:Tfu_0174 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; Histidine biosynthesis protein HisG domain; PRIAM: ATP phosphoribosyltransferase; SPTR: C1YUG6 ATP phosphoribosyltransferase (Homohexameric); TIGRFAM: ATP phosphoribosyltransferase; PFAM: HisG, C-terminal domain; ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, C-terminal domain; ATP phosphoribosyltransferase
YP_003683267.1	KEGG: rop:ROP_03480 hypothetical protein; SPTR: C1YUG5  uncharacterized protein
YP_003683268.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR009061:IPR000551; KEGG: rha:RHA1_ro00223 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YUG4 Predicted transcriptional regulator; PFAM: MerR family regulatory protein
YP_003683269.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR009061; KEGG: ami:Amir_2898 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YUG3 Predicted transcriptional regulator; PFAM: MerR family regulatory protein
YP_003683270.1	InterPro IPR011637; KEGG: fal:FRAAL4142 hypothetical protein; PFAM: DoxX family protein; SPTR: C1YUG2 Predicted membrane protein, COG4270
YP_003683271.1	COGs: COG0421 Spermidine synthase; InterPro IPR001045; KEGG: tfu:Tfu_0173 hypothetical protein; PFAM: Spermine synthase; SPTR: C1YUG1 Spermidine synthase; PFAM: Spermine/spermidine synthase
YP_003683272.1	COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR005672:IPR000515; KEGG: fre:Franean1_0354 phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YUF9 Phosphate ABC transporter membrane protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA
YP_003683273.1	COGs: COG0573 ABC-type phosphate transport system permease component; InterPro IPR011864:IPR000515; KEGG: aba:Acid345_2974 phosphate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YUF8 Phosphate ABC transporter membrane protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC
YP_003683274.1	COGs: COG0226 ABC-type phosphate transport system periplasmic component; InterPro IPR006059:IPR005673; KEGG: ttr:Tter_2743 phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: C1YUF7 Phosphate-binding protein; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate ABC transporter, phosphate-binding protein
YP_003683275.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterProIPR001867:IPR001789:IPR011991:IPR011006:IPR 016032; KEGG: sro:Sros_8335 response regulator receiver protein; PFAM: transcriptional regulator domain protein; response regulator receiver; SMART: transcriptional regulator domain protein; response regulator receiver; SPTR: C1YUF6 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003683276.1	COGs: COG1117 ABC-type phosphate transport system ATPase component; InterProIPR015850:IPR017871:IPR005670:IPR003593:IPR 003439; KEGG: saq:Sare_0333 phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1YUF5 Phosphate ABC transporter ATP-binding protein; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein
YP_003683277.1	COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR012335:IPR012336:IPR017937:IPR005746:IPR 013766:IPR006662:IPR017936; KEGG: tfu:Tfu_0172 thioredoxin; PFAM: Thioredoxin domain; SPTR: C1YUF4 Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_003683278.1	COGs: COG2149 membrane protein; InterPro IPR003807; KEGG: tfu:Tfu_0171 hypothetical protein; PFAM: protein of unknown function DUF202; SPTR: C1YUF3 Predicted membrane protein, COG2149; PFAM: Domain of unknown function DUF
YP_003683279.1	InterPro IPR020264; KEGG: tfu:Tfu_0170 hypothetical protein; SPTR: C1YUF2  uncharacterized protein; PFAM: Domain of unknown function DUF
YP_003683280.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: tfu:Tfu_0169 nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase); PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YUF1 Nucleoside-diphosphate-sugar epimerase; PFAM: NAD dependent epimerase/dehydratase family
YP_003683281.1	COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: tfu:Tfu_0168 hypothetical protein; PFAM: LmbE family protein; SPTR: C1YUF0 Uncharacterized LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase
YP_003683282.1	InterPro IPR014985; KEGG: tfu:Tfu_0167 hypothetical protein; PFAM: WbqC-like family protein; SPTR: C1YUE9 WbqC-like protein; PFAM: WbqC-like protein family
YP_003683283.1	COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: tfu:Tfu_0166 cell wall biosynthesis glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: C1YUE8 Glycosyl transferase; PFAM: Glycosyl transferase family 2
YP_003683284.1	KEGG: tfu:Tfu_0165 hypothetical protein; SPTR: C1YUE7  uncharacterized protein
YP_003683285.1	COGs: COG3346 conserved hypothetical protein; InterPro IPR002994; KEGG: tfu:Tfu_0164 hypothetical protein; SPTR: C1YUE6 Uncharacterized conserved protein; PFAM: SURF1 family
YP_003683286.1	InterPro IPR007061; KEGG: sco:SCO4371 hypothetical protein; PFAM: protein of unknown function DUF664; SPTR: C1YUE5  uncharacterized protein; PFAM: Protein of unknown function (DUF664)
YP_003683287.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: tfu:Tfu_0162 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; PRIAM: 3-oxoadipate enol-lactonase; SPTR: C1YUE4 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold; TIGRFAM: 3-oxoadipate enol-lactonase
YP_003683288.1	InterPro IPR004360; KEGG: ava:Ava_0978 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1YUE3 Lactoylglutathione lyase family protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003683289.1	COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: tcu:Tcur_1876 class II aldolase/adducin family protein; PFAM: class II aldolase/adducin family protein; SPTR: C1YUE2 Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase; PFAM: Class II Aldolase and Adducin N-terminal domain
YP_003683290.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016162:IPR016161:IPR016160:IPR015590; KEGG: svi:Svir_31700 aldehyde dehydrogenase (acceptor); PFAM: Aldehyde Dehydrogenase; SPTR: C1YUE1 Aldehyde dehydrogenase (Acceptor); PFAM: Aldehyde dehydrogenase family; TIGRFAM: glycine betaine aldehyde dehydrogenase
YP_003683291.1	COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR000172:IPR007867:IPR012132; KEGG: sen:SACE_4202  oxidoreductase; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; SPTR: C1YUE0 Choline oxidase; PFAM: GMC oxidoreductase
YP_003683292.1	KEGG: fal:FRAAL0557 hypothetical protein; SPTR: C1YUD9  uncharacterized protein
YP_003683293.1	COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: sro:Sros_6275 metal-dependent hydrolase-like protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: C1YUD8 Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family
YP_003683294.1	KEGG: tfu:Tfu_0161 hypothetical protein; SPTR: C1YUD7  uncharacterized protein
YP_003683295.1	COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR010918:IPR016188:IPR010074:IPR000728; KEGG: tfu:Tfu_0158 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: C1YUD6 Phosphoribosylformylglycinamidine synthase subunit II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II
YP_003683296.1	KEGG: tfu:Tfu_0157 hypothetical protein; SPTR: C1YUD5  uncharacterized protein
YP_003683297.1	COGs: COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase glutamine amidotransferase domain; InterPro IPR010075:IPR011698:IPR017926; KEGG: tfu:Tfu_0156 phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: C1YUD4 Phosphoribosylformylglycinamidine synthase subunit I; TIGRFAM: phosphoribosylformylglycinamidine synthase I; PFAM: Glutamine amidotransferase class-I; TIGRFAM: phosphoribosylformylglycinamidine synthase I
YP_003683298.1	COGs: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); InterPro IPR003594; KEGG: tfu:Tfu_0177 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; SPTR: C1YUD3 Anti-sigma regulatory factor (Ser/Thr protein kinase); PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003683299.1	COGs: COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase PurS component; InterPro IPR003850; KEGG: tfu:Tfu_0178 phosphoribosylformylglycinamidine synthase subunit PurS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; SPTR: C1YUD2 Phosphoribosylformylglycinamidine synthase, purS protein; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: Phosphoribosylformylglycinamidine (FGAM) synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS protein
YP_003683300.1	COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR013325:IPR013324:IPR000838:IPR014293:IPR 014284:IPR007627:IPR013249; KEGG: tfu:Tfu_0179 RNA polymerase sigma factor RpoE; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: C1YUD1 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, TIGR02947 family
YP_003683301.1	InterPro IPR003675; KEGG: sen:SACE_3667 hypothetical protein; PFAM: Abortive infection protein; SPTR: C1YUD0 CAAX amino terminal protease family; PFAM: CAAX amino terminal protease family
YP_003683302.1	COGs: COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit; InterPro IPR017596:IPR001017; KEGG: tfu:Tfu_0180 pyruvate dehydrogenase (lipoamide); PFAM: dehydrogenase E1 component; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SPTR: C1YUC9 Pyruvate dehydrogenase E1 component, alpha subunit; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit
YP_003683303.1	COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR009014:IPR005476:IPR005475:IPR015941; KEGG: tfu:Tfu_0181  branched-chain alpha keto acid dehydrogenase E1 beta subunit; PFAM: Transketolase central region; Transketolase domain protein; SMART: Transketolase central region; SPTR: C1YUC8 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_003683304.1	COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR004167:IPR001078:IPR000089:IPR011053; KEGG: tfu:Tfu_0182 branched-chain alpha-keto acid dehydrogenase subunit E2; PFAM: catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; biotin/lipoyl attachment domain-containing protein; SPTR: C1YUC7 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme
YP_003683305.1	KEGG: cgb:cg0446 succinate dehydrogenase flavoprotein subunit; SPTR: C1YUC6  uncharacterized protein
YP_003683306.1	KEGG: rer:RER_27910 hypothetical protein; SPTR: C1YUC5  uncharacterized protein
YP_003683307.1	KEGG: gbm:Gbem_3597 flavocytochrome c; SPTR: C1YUC4  uncharacterized protein
YP_003683308.1	COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR012338:IPR001466; KEGG: cai:Caci_0634 beta-lactamase; PFAM: beta-lactamase; SPTR: C1YUC3 Penicillin-binding protein, beta-lactamase class C; PFAM: Beta-lactamase
YP_003683309.1	COGs: COG0679 permease; InterPro IPR004776; KEGG: sco:SCO4893 transport integral membrane protein; PFAM: Auxin Efflux Carrier; SPTR: C1YQ10 Predicted permease; PFAM: Membrane transport protein
YP_003683310.1	COGs: COG0515 Serine/threonine protein kinase; InterPro IPR011009:IPR001245:IPR000719; KEGG: tcu:Tcur_1846 serine/threonine protein kinase; PFAM: tyrosine protein kinase; SPTR: C1YQ09 Protein tyrosine kinase; PFAM: Protein kinase domain
YP_003683311.1	KEGG: stp:Strop_3970 peptidylprolyl isomerase, FKBP-type; SPTR: C1YQ08  uncharacterized protein
YP_003683312.1	KEGG: car:cauri_0454 hypothetical protein; SPTR: C1YQ07  uncharacterized protein; PFAM: Proteins of 100 residues with WXG
YP_003683313.1	KEGG: hypothetical protein; SPTR: C1YQ06  uncharacterized protein
YP_003683314.1	KEGG: sgr:SGR_2351  glycosyl transferase; SPTR: C1YQ05  uncharacterized protein
YP_003683315.1	COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR003593; KEGG: nca:Noca_0303 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; SPTR: C1YQ04 DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: FtsK/SpoIIIE family
YP_003683316.1	InterPro IPR006707; KEGG: saq:Sare_4752 hypothetical protein; PFAM: protein of unknown function DUF571; SPTR: C1YQ02  uncharacterized protein; PFAM: Protein of unknown function (DUF571); TIGRFAM: secretion protein snm4
YP_003683317.1	KEGG: mba:Mbar_A0808 hypothetical protein; SPTR: C1YQ00  uncharacterized protein
YP_003683318.1	KEGG: mxa:MXAN_2253 S37 family peptidase; SPTR: C1YPZ9  uncharacterized protein
YP_003683319.1	InterPro IPR015943:IPR011044:IPR001680; KEGG: hypothetical protein; SMART: WD-40 repeat protein; SPTR: C1YPZ8  uncharacterized protein; PFAM: WD domain, G-beta repeat
YP_003683320.1	KEGG: tfu:Tfu_2904 hypothetical protein; SPTR: C1YPZ7  uncharacterized protein
YP_003683321.1	InterPro IPR016196:IPR011701; KEGG: tfu:Tfu_2905  transmembrane transport protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YPZ6 Sugar phosphate permease; PFAM: Major Facilitator Superfamily
YP_003683322.1	KEGG: sma:SAV_4093 hypothetical protein; SPTR: C1YPZ5  uncharacterized protein
YP_003683323.1	InterPro IPR009002:IPR019967:IPR011576; KEGG: sro:Sros_8501 hypothetical protein; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: C1YPZ3 Pyridoxamine 5'-phosphate oxidase; TIGRFAM:  F420-dependent enzyme; PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme, Rv0121 family
YP_003683324.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR016040:IPR002347; KEGG: nfa:nfa23450 acetoin dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: C1YPZ2  uncharacterized protein; PFAM: short chain dehydrogenase
YP_003683325.1	KEGG: mbt:JTY_0310 hypothetical protein; SPTR: C1YPZ1  uncharacterized protein; PFAM: Ribbon-helix-helix protein, copG family
YP_003683326.1	COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR013786:IPR006091:IPR006090:IPR009100:IPR 013764:IPR006092:IPR009075; KEGG: tfu:Tfu_0210  acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: C1YPZ0 Acyl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_003683327.1	InterPro IPR003594; KEGG: tfu:Tfu_1352 hypothetical protein; SPTR: C1YPY9  uncharacterized protein
YP_003683328.1	KEGG: amr:AM1_A0167 hypothetical protein; SPTR: C1YPY8  uncharacterized protein
YP_003683329.1	COGs: COG2515 1-aminocyclopropane-1-carboxylate deaminase; InterPro IPR001926; KEGG: sen:SACE_1968 1-aminocyclopropane-1-carboxylate deaminase; SPTR: C1YPY7 1-aminocyclopropane-1-carboxylate deaminase; PFAM: Pyridoxal-phosphate dependent enzyme
YP_003683330.1	InterPro IPR007278; KEGG: tfu:Tfu_1802 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YPY6  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003683331.1	InterPro IPR001387:IPR010982; KEGG: tfu:Tfu_1248 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C1YPY5 Helix-turn-helix protein; PFAM: Helix-turn-helix
YP_003683332.1	InterPro IPR003594; KEGG: tcu:Tcur_1416  anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: C1YPY4 Anti-sigma regulatory factor (Ser/Thr protein kinase); PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003683333.1	InterPro IPR009061; KEGG: gbr:Gbro_1042 DNA binding domain protein, excisionase family; SPTR: C1YPY3  uncharacterized protein
YP_003683334.1	KEGG: hypothetical protein; K12615 enhancer of mRNA-decapping protein 3; SPTR: C1YPY2  uncharacterized protein
YP_003683335.1	COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR013651:IPR011761; KEGG: tfu:Tfu_1806 hypothetical protein; PFAM: RimK domain protein ATP-grasp; SPTR: C1YPY1 RimK-like protein
YP_003683336.1	COGs: COG2518 Protein-L-isoaspartate carboxylmethyltransferase; InterPro IPR000682; KEGG: svi:Svir_14220 protein-L-isoaspartate carboxylmethyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: C1YPY0 Protein-L-isoaspartate carboxylmethyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_003683337.1	InterPro IPR007278; KEGG: tfu:Tfu_0262 hypothetical protein; PFAM: protein of unknown function DUF397; SPTR: C1YPX9  uncharacterized protein; PFAM: Domain of unknown function (DUF397)
YP_003683338.1	COGs: COG2518 Protein-L-isoaspartate carboxylmethyltransferase; InterPro IPR000682; KEGG: tcu:Tcur_3764 protein-L-isoaspartate(D-aspartate)O-methyltrans ferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; PRIAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: C1YPX8 Protein-L-isoaspartate carboxylmethyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_003683339.1	SPTR: C1YPY0 Protein-L-isoaspartate carboxylmethyltransferase
YP_003683340.1	InterPro IPR016181:IPR000182; KEGG: lac:LBA0825 exodeoxyribonuclease V alpha chain; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YPX7 Acetyltransferase (GNAT) family protein; PFAM: Acetyltransferase (GNAT) family
YP_003683341.1	KEGG: sco:SCO3086 lipoprotein; SPTR: C1YPX6  uncharacterized protein
YP_003683342.1	KEGG: bbe:BBR47_27780  aminotransferase; SPTR: C1YPX5  uncharacterized protein; PFAM: Suppressor of fused protein (SUFU)
YP_003683343.1	InterPro IPR003756:IPR006442; KEGG: rha:RHA1_ro08667 hypothetical protein; PFAM: protein of unknown function DUF172; SPTR: C1YPX4 Prevent-host-death family protein; TIGRFAM: prevent-host-death family protein; PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein
YP_003683344.1	KEGG: tcu:Tcur_4689 hypothetical protein; SPTR: C1YPX3  uncharacterized protein; PFAM: ATPase family associated with various cellular activities (AAA); ATPase involved in DNA repair
YP_003683345.1	COGs: COG2268 conserved hypothetical protein; InterPro IPR001107; KEGG: ami:Amir_6805 hypothetical protein; PFAM: band 7 protein; SPTR: C1YPX2 Uncharacterized conserved protein
YP_003683346.1	KEGG: tfu:Tfu_2832 hypothetical protein; SPTR: C1YPX1  uncharacterized protein
YP_003683347.1	COGs: COG3795 conserved hypothetical protein; InterPro IPR005545:IPR011008; KEGG: pap:PSPA7_4029 hypothetical protein; PFAM: YCII-related; SPTR: C1YPX0 Uncharacterized conserved protein; PFAM: YCII-related domain
YP_003683348.1	COGs: COG4941 RNA polymerase sigma factor containing a TPR repeat domain; InterProIPR013325:IPR013324:IPR014284:IPR007627:IPR 013249; KEGG: vap:Vapar_1460  RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: C1YPW9 RNA polymerase, sigma subunit, ECF family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003683349.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: kse:Ksed_18430 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1YPW8 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter
YP_003683350.1	KEGG: nca:Noca_0893 hypothetical protein; SPTR: C1YPW7  uncharacterized protein
YP_003683351.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR016040:IPR001509; KEGG: sgr:SGR_2256  reductase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YPW6 Nucleoside-diphosphate-sugar epimerase; PFAM: NAD dependent epimerase/dehydratase family
YP_003683352.1	COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR017730:IPR001270:IPR018368:IPR003959:IPR 013093:IPR003593:IPR004176:IPR019489; KEGG: tfu:Tfu_0200 ATPase; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: C1YPW5 ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB
YP_003683353.1	InterPro IPR009061:IPR000551; KEGG: tfu:Tfu_0199 regulatory protein, MerR; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: C1YPW4 Predicted transcriptional regulator; PFAM: MerR family regulatory protein
YP_003683354.1	COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterProIPR001305:IPR001623:IPR012724:IPR008971:IPR 002939:IPR003095:IPR018253; KEGG: tfu:Tfu_0198 heat shock protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: C1YPW3 Chaperone protein dnaJ; TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain (4 repeats); DnaJ domain; DnaJ C terminal region; TIGRFAM: chaperone protein DnaJ
YP_003683355.1	COGs: COG0576 Molecular chaperone GrpE (heat shock protein); InterPro IPR013805:IPR009012:IPR000740; KEGG: tfu:Tfu_0197 molecular chaperone GrpE (heat shock protein); PFAM: GrpE protein; SPTR: C1YPW2 Protein grpE; PFAM: GrpE
YP_003683356.1	COGs: COG0443 Molecular chaperone; InterPro IPR013126:IPR001023:IPR018181:IPR012725; KEGG: tfu:Tfu_0196 molecular chaperone DnaK; PFAM: Heat shock protein 70; SPTR: C1YPW1 Chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK
YP_003683357.1	KEGG: chu:CHU_2148 polysaccharide lyase polysaccharide lyase family 14 protein; SPTR: C1YPW0  uncharacterized protein
YP_003683358.1	COGs: COG0247 Fe-S oxidoreductase; InterProIPR017896:IPR012285:IPR017900:IPR004017:IPR 009051; KEGG: tfu:Tfu_0195  iron-sulphur-binding reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; PRIAM: CoB--CoM heterodisulfide reductase; SPTR: C1YPV9 Fe-S oxidoreductase; PFAM: Cysteine-rich domain
YP_003683359.1	COGs: COG0657 Esterase/lipase; KEGG: svi:Svir_13750 esterase/lipase; SPTR: C1YPV8 Esterase/lipase; PFAM: alpha/beta hydrolase fold
YP_003683360.1	InterPro IPR009057:IPR011075:IPR012287:IPR001647; KEGG: svi:Svir_13760 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: C1YPV7 Transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003683361.1	KEGG: sen:SACE_0134 hypothetical protein; SPTR: C1YPV6  uncharacterized protein
YP_003683362.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: tfu:Tfu_0291 ABC-type multidrug transport system ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1YPV5 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter
YP_003683363.1	InterPro IPR013526:IPR013525; KEGG: tfu:Tfu_0290  integral membrane protein; PFAM: ABC-2 type transporter; SPTR: C1YPV4 ABC-2 type transporter; PFAM: ABC-2 type transporter
YP_003683364.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594; KEGG: tfu:Tfu_0289  two-component system sensor kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C1YPV3 Signal transduction histidine kinase, COG4585; PFAM: Histidine kinase
YP_003683365.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594; KEGG: tfu:Tfu_0289  two-component system sensor kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C1YPV2 Signal transduction histidine kinase, COG4585; PFAM: Histidine kinase
YP_003683366.1	KEGG: sco:SCO1318 hypothetical protein; SPTR: C1YPV1  uncharacterized protein
YP_003683367.1	KEGG: tfu:Tfu_0194 hypothetical protein; SPTR: C1YPV0  uncharacterized protein
YP_003683368.1	COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451:IPR011004; KEGG: tfu:Tfu_0193 carbonic anhydrase/acetyltransferase isoleucine patch superfamily protein; SPTR: C1YPU9 Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase
YP_003683369.1	KEGG: tfu:Tfu_0192 hypothetical protein; SPTR: C1YPU8  uncharacterized protein
YP_003683370.1	InterPro IPR016181:IPR000182; KEGG: tfu:Tfu_0191 N-acetylglutamate synthase and related acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YPU7 Predicted acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_003683371.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR016196:IPR011701:IPR001411; KEGG: sro:Sros_6564 EmrB/QacA family drug resistance transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YPU6 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_003683372.1	InterPro IPR001647:IPR012287:IPR009057; KEGG: tcu:Tcur_4395 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: C1YPU5 Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_003683373.1	InterPro IPR013217; KEGG: saq:Sare_0294 methyltransferase type 11; PFAM: Methyltransferase type 12; SPTR: C1YPU4 Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain
YP_003683374.1	COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR013813:IPR006175:IPR006056; KEGG: bfa:Bfae_04590 endoribonuclease L-PSP, PFAM: Endoribonuclease L-PSP; SPTR: C1YPU3 Endoribonuclease L-PSP, TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP
YP_003683375.1	COGs: COG3653 N-acyl-D-aspartate/D-glutamate deacylase; InterPro IPR011059:IPR013108:IPR012855; KEGG: sen:SACE_5301 N-acyl-D-amino-acid deacylase; PFAM: Amidohydrolase 3; D-aminoacylase domain protein; PRIAM: N-acyl-D-amino-acid deacylase; SPTR: C1YPU2 Dihydroorotase; PFAM: D-aminoacylase, C-terminal region; Amidohydrolase family
YP_003683376.1	COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: tfu:Tfu_0189 PfkB family carbohydrate kinase; PFAM: PfkB domain protein; SPTR: C1YPU1 Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase
YP_003683377.1	KEGG: tfu:Tfu_0187 hypothetical protein; SPTR: C1YPU0  uncharacterized protein
YP_003683378.1	KEGG: ami:Amir_1085 hypothetical protein; SPTR: C1YPT9  uncharacterized protein
YP_003683379.1	COGs: COG0706 Preprotein translocase subunit YidC; InterPro IPR001708:IPR020001; KEGG: tfu:Tfu_0185 preprotein translocase YidC subunit; PFAM: 60 kDa inner membrane insertion protein; SPTR: C1YPT8 Preprotein translocase subunit YidC; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain
YP_003683380.1	InterPro IPR001424; KEGG: rop:ROP_45170 hypothetical protein; SPTR: C1YPT7  uncharacterized protein; PFAM: Copper/zinc superoxide dismutase (SODC)
YP_003683381.1	InterPro IPR005829; KEGG: cak:Caul_3448 hypothetical protein; SPTR: C1YPT6  uncharacterized protein; PFAM: Domain of unknown function (DUF3291)
YP_003683382.1	COGs: COG2345 transcriptional regulator protein; InterPro IPR001845:IPR011991; KEGG: sro:Sros_5865  transcriptional regulator; SMART: regulatory protein ArsR; SPTR: C1YPT5 Predicted transcriptional regulator, COG2345
YP_003683383.1	KEGG: acp:A2cp1_2891 response regulator receiver; SPTR: C1YPT4  uncharacterized protein
YP_003683384.1	KEGG: gbe:GbCGDNIH1_0976 ATPase related to magnesium chelatase subunit ChlI; SPTR: C1YPT3  uncharacterized protein
YP_003683385.1	KEGG: apr:Apre_1168 heat-inducible transcription repressor HrcA; SPTR: C1YPT2  uncharacterized protein
YP_003683386.1	KEGG: stp:Strop_0486 hypothetical protein; SPTR: C1YPT1  uncharacterized protein
YP_003683387.1	COGs: COG1739 conserved hypothetical protein; InterProIPR020568:IPR009022:IPR020569:IPR001498:IPR 015269:IPR015796; KEGG: tfu:Tfu_2757 hypothetical protein; PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; SPTR: C1YPT0  uncharacterized protein; PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: conserved hypothetical protein TIGR00257
YP_003683388.1	InterPro IPR011047; KEGG: tfu:Tfu_2760 hypothetical protein; SPTR: C1YPS9  uncharacterized protein
YP_003683389.1	KEGG: col-111; COLlagen; SPTR: C1YPS8  uncharacterized protein
YP_003683390.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR011009:IPR008957:IPR002290:IPR003961:IPR 000719; KEGG: cai:Caci_6706 serine/threonine protein kinase; PFAM: Fibronectin type III domain protein; SMART: serine/threonine protein kinase; SPTR: C1YPS7 Serine/threonine protein kinase; PFAM: Protein kinase domain; Fibronectin type III domain
YP_003683391.1	KEGG: Os11g0605900; hypothetical protein; SPTR: Q0IRQ7 Os11g0605900 protein
YP_003683392.1	KEGG: sak:SAK_1453 licD2 protein; SPTR: C1YPS6  uncharacterized protein
YP_003683393.1	KEGG: RWP12; RWP-RK transcription factor; SPTR: C1YPS5  uncharacterized protein
YP_003683394.1	KEGG: bbr:BB4299  amidase; SPTR: C1YPS4  uncharacterized protein
YP_003683395.1	KEGG: ypy:YPK_1625 hypothetical protein; SPTR: C1YPS3  uncharacterized protein
YP_003683396.1	KEGG: pjd:Pjdr2_1385 hypothetical protein; SPTR: C1YPS2  uncharacterized protein
YP_003683397.1	COGs: COG0171 NAD synthase; InterPro IPR003010:IPR014729:IPR003694:IPR014445; KEGG: tcu:Tcur_3108 NAD+ synthetase; PFAM: NAD synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: C1YPS1 NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase
YP_003683398.1	COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: svi:Svir_21700 amino acid carrier protein; PFAM: sodium:alanine symporter; SPTR: C7MWS4 Amino acid carrier protein; TIGRFAM: amino acid carrier protein; PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein
YP_003683399.1	KEGG: ami:Amir_0167 PE-PGRS family protein; SPTR: C1YPR3  uncharacterized protein
YP_003683400.1	KEGG: tcu:Tcur_2837 kinetoplast-associated protein-like protein; SPTR: C1YPR2  uncharacterized protein
YP_003683401.1	KEGG: ami:Amir_2437 hypothetical protein; SPTR: C1YPR1  uncharacterized protein
YP_003683402.1	KEGG: sus:Acid_3319 hypothetical protein; SPTR: C1YPR0  uncharacterized protein
YP_003683403.1	KEGG: ach:Achl_4561 hypothetical protein; SPTR: C1YPQ9  uncharacterized protein
YP_003683404.1	KEGG: ank:AnaeK_0255 response regulator receiver protein; SPTR: C1YPQ8  uncharacterized protein
YP_003683405.1	KEGG: bpm:BURPS1710b_A1438 hypothetical protein; SPTR: C1YPQ7  uncharacterized protein
YP_003683406.1	COGs: COG3505 Type IV secretory pathway VirD4 protein; InterPro IPR003688; KEGG: fra:Francci3_2361 hypothetical protein; PFAM: TRAG family protein; SPTR: C1YPQ6 Type IV secretory pathway, VirD4 component; PFAM: TraG/TraD family
YP_003683407.1	KEGG: nfa:pnf11410 hypothetical protein; SPTR: C1YPQ5  uncharacterized protein
YP_003683408.1	KEGG: nfa:pnf11420 hypothetical protein; SPTR: C1YPQ4  uncharacterized protein
YP_003683409.1	KEGG: cms:CMS_2696  integral membrane protein; SPTR: C1YPQ3  uncharacterized protein
YP_003683410.1	KEGG: hch:HCH_05355 leucyl-tRNA synthetase; SPTR: C1YPQ2  uncharacterized protein
YP_003683411.1	KEGG: syf:Synpcc7942_1971 peptidase M20D, amidohydrolase; SPTR: C1YPQ1  uncharacterized protein
YP_003683412.1	KEGG: nfa:pnf11470 hypothetical protein; SPTR: C1YPQ0  uncharacterized protein
YP_003683413.1	KEGG: tfu:Tfu_1320 hypothetical protein; SPTR: C1YPP9  uncharacterized protein
YP_003683414.1	KEGG: tfu:Tfu_0479 hypothetical protein; SPTR: C1YPP8  uncharacterized protein
YP_003683415.1	COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: tfu:Tfu_0480 cell wall-associated hydrolase (invasion-associated proteins); PFAM: NLP/P60 protein; SPTR: C1YPP7 Cell wall-associated hydrolase, invasion-associated protein; PFAM: NlpC/P60 family
YP_003683416.1	KEGG: reu:Reut_B5390 glycin-rich signal peptide protein; SPTR: C1YPP6  uncharacterized protein
YP_003683417.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR003593:IPR011703:IPR016366; KEGG: saq:Sare_3112 ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; SPTR: C1YPP5 MoxR-like ATPase; PFAM: ATPase family associated with various cellular activities (AAA)
YP_003683418.1	COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: stp:Strop_2913 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: C1YPP4 Uncharacterized conserved protein; PFAM: Protein of unknown function DUF58
YP_003683419.1	COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: stp:Strop_2914 transglutaminase domain-containing protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; SPTR: C1YPP3 Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily
YP_003683420.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR011009:IPR008957:IPR020635:IPR002290:IPR 017442:IPR003961:IPR000719; KEGG: rha:RHA1_ro05837 serine/threonine-protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Fibronectin type III domain protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: C1YPP2 Protein kinase family protein; PFAM: Protein kinase domain
YP_003683421.1	KEGG: sco:SCO0409 spore-associated protein precursor; SPTR: C1YPP1  uncharacterized protein
YP_003683422.1	InterPro IPR003961:IPR008957; KEGG: stp:Strop_2911 fibronectin, type III domain-containing protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; SPTR: C1YPP0 Fibronectin type III domain-containing protein; PFAM: Fibronectin type III domain
YP_003683423.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR011009:IPR017441:IPR008271:IPR020635:IPR 002290:IPR017442:IPR000719; KEGG: fre:Franean1_5221 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: C1YPN9 Protein kinase family protein; PFAM: Protein kinase domain
YP_003683424.1	KEGG: sgr:SGR_3951 hypothetical protein; SPTR: C1YPN8  uncharacterized protein
YP_003683425.1	KEGG: scl:sce4001 hypothetical protein; SPTR: C1YPN7  uncharacterized protein; PFAM: Sulfotransferase domain
YP_003683426.1	KEGG: nca:Noca_4618 major facilitator transporter; SPTR: C1YPN6  uncharacterized protein
YP_003683427.1	KEGG: fal:FRAAL5308 hypothetical protein; SPTR: C1YPN5  uncharacterized protein
YP_003683428.1	KEGG: hypothetical protein; SPTR: C1YPN4  uncharacterized protein
YP_003683429.1	COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006099:IPR014348:IPR006158:IPR016176; KEGG: tfu:Tfu_2761 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; PRIAM: Methylmalonyl-CoA mutase; SPTR: C1YPN3 Methylmalonyl-CoA mutase, N-terminal domain/subunit; PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase, heterodimeric type, beta chain
YP_003683430.1	COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterProIPR006158:IPR006099:IPR016176:IPR014348:IPR 006159:IPR006098; KEGG: tfu:Tfu_2762 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; PRIAM: Methylmalonyl-CoA mutase; SPTR: C1YPN2 Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain
YP_003683431.1	COGs: COG1703  periplasmic protein kinase ArgK and related GTPase of G3E family; InterPro IPR005129; KEGG: tfu:Tfu_2763 arginine/ornithine transport system ATPase; PFAM: ArgK protein; SPTR: C1YPN1 LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase
YP_003683432.1	COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645:IPR003658; KEGG: tfu:Tfu_2764 anti-sigma factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: C1YPN0 Anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_003683433.1	InterPro IPR013216; KEGG: sen:SACE_3648 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: C1YPM9 Methyltransferase family protein; PFAM: Methyltransferase domain
YP_003683434.1	KEGG: hypothetical protein; SPTR: C1YPM8  uncharacterized protein
YP_003683435.1	KEGG: saq:Sare_1608 hypothetical protein; SPTR: C1YPM7  uncharacterized protein
YP_003683436.1	COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR008279:IPR013815:IPR002192; KEGG: sen:SACE_2483 pyruvate, water dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; SPTR: C1YPM6 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; PFAM: PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain
YP_003683437.1	KEGG: GH24721 gene product from transcript GH24721-RA; SPTR: C1YPM5  uncharacterized protein
YP_003683438.1	KEGG: rlt:Rleg2_5999 major facilitator superfamily MFS_1; SPTR: C1YPM4  uncharacterized protein
YP_003683439.1	KEGG: svi:Svir_34430 ABC-type enterochelin transport system, ATPase component; SPTR: C1YPM3  uncharacterized protein
YP_003683440.1	InterPro IPR012551; KEGG: sgr:SGR_3140 hypothetical protein; PFAM: protein of unknown function DUF1707; SPTR: C1YPM2  uncharacterized protein; PFAM: Domain of unknown function (DUF1707)
YP_003683441.1	KEGG: pzu:PHZ_p0103 transport-associated protein(predicted periplasmic or secreted lipoprotein); SPTR: C1YPM1  uncharacterized protein
YP_003683442.1	COGs: COG1609 Transcriptional regulators; InterPro IPR010982:IPR000843:IPR001761; KEGG: sro:Sros_1296 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: C1YPM0 Transcriptional regulator, LacI family; PFAM: Bacterial regulatory proteins, lacI family; family
YP_003683443.1	InterPro IPR012312; KEGG: ami:Amir_1017 hemerythrin HHE cation binding domain protein; PFAM: Hemerythrin HHE cation binding domain protein; SPTR: C1YPL9 Hemerythrin HHE cation binding domain-containing protein; PFAM: Hemerythrin HHE cation binding domain; Rho termination factor, N-terminal domain
YP_003683444.1	COGs: COG2115 Xylose isomerase; InterPro IPR013022:IPR001998:IPR012307:IPR013453; KEGG: tfu:Tfu_1603 xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; PRIAM: Xylose isomerase; SPTR: C1YPL8 Xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase, Arthrobacter type
YP_003683445.1	COGs: COG1874 Beta-galactosidase; InterProIPR013739:IPR013738:IPR003476:IPR013781:IPR 017853:IPR013529; KEGG: tfu:Tfu_1615 beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; PRIAM: Beta-galactosidase; SPTR: C1YPL7 Beta-galactosidase; PFAM: Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain; Beta-galactosidase
YP_003683446.1	InterPro IPR008928; KEGG: tfu:Tfu_1614 hypothetical protein; PRIAM: Alpha-L-fucosidase; SPTR: C1YPL6  uncharacterized protein
YP_003683447.1	InterPro IPR001919:IPR012291:IPR008965:IPR002860; KEGG: tfu:Tfu_1612 cellulose-binding family II protein; PFAM: cellulose-binding family II; glycosyl hydrolase BNR repeat-containing protein; SMART: cellulose-binding family II; SPTR: C1YPL5  cellulose binding protein; PFAM: Cellulose binding domain; BNR/Asp-box repeat
YP_003683448.1	COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: tfu:Tfu_1611  transport system integral membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YPL4 Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003683449.1	COGs: COG4209 ABC-type polysaccharide transport system permease component; InterPro IPR000515; KEGG: tfu:Tfu_1610  transport system integral membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1YPL3 Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component
YP_003683450.1	COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR017909:IPR006311:IPR006059; KEGG: tfu:Tfu_1609 ABC-type sugar transport system periplasmic component; PFAM: extracellular solute-binding protein family 1; SPTR: C1YPL2 Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein
YP_003683451.1	COGs: COG1472 Beta-glucosidase-related glycosidase; InterProIPR008979:IPR002772:IPR001764:IPR005084:IPR 017853; KEGG: tfu:Tfu_1607 exo-1,4-beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; Carbohydrate binding family 6; PRIAM: Beta-glucosidase; SPTR: C1YPL1 Beta-glucosidase-like glycosyl hydrolase; PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; Carbohydrate binding module (family 6)
YP_003683452.1	COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR012338:IPR001466; KEGG: rrs:RoseRS_3665 beta-lactamase; PFAM: beta-lactamase; SPTR: C1YPL0 Penicillin-binding protein, beta-lactamase class C; PFAM: Beta-lactamase
YP_003683453.1	COGs: COG1695 transcriptional regulator protein; InterPro IPR011991:IPR005149:IPR018309; KEGG: bcv:Bcav_3692 transcriptional regulator, PadR-like family; PFAM: transcriptional regulator PadR family protein; Transcriptional regulator PadR-like; SPTR: C1YPK9 Predicted transcriptional regulator; PFAM: Transcriptional regulator PadR-like family; Virulence activator alpha C-term
YP_003683454.1	COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: tfu:Tfu_1605  xylose repressor; PFAM: ROK family protein; SPTR: C1YPK8 Transcriptional regulator/sugar kinase; PFAM: ROK family; IclR helix-turn-helix domain
YP_003683455.1	COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR016181:IPR000182; KEGG: svi:Svir_31300 acetyltransferase, ribosomal protein N-acetylase; PFAM: GCN5-related N-acetyltransferase; SPTR: C1YPK7 Acetyltransferase, ribosomal protein N-acetylase; PFAM: Acetyltransferase (GNAT) family
YP_003683456.1	COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR020084:IPR015797:IPR000086:IPR020476; KEGG: tfu:Tfu_2758  mut-like protein; PFAM: NUDIX hydrolase; SPTR: C1YPK6 ADP-ribose pyrophosphatase; PFAM: NUDIX domain; TIGRFAM: mutator mutT protein