-- dump date 20140619_164617 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 261292000001 SEQ_END SEQ_END NC_015731.1 3783444 3783444 DR NC_015731.1; contig end 3783444..3783444 Nitrosomonas sp. Is79A3 YP_004693309.1 CDS Nit79A3_0001 NC_015731.1 62 1435 D SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; TIGRFAM: Chromosomal replication control, initiator DnaA; KEGG: nit:NAL212_0165 chromosomal replication initiator protein DnaA; HAMAP: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; chromosome replication initiator DnaA 62..1435 Nitrosomonas sp. Is79A3 10935671 YP_004693310.1 CDS Nit79A3_0002 NC_015731.1 1626 2741 D TIGRFAM: DNA polymerase III, beta chain; PFAM: DNA polymerase III, beta chain; KEGG: nit:NAL212_0166 DNA polymerase III, beta subunit; SMART: DNA polymerase III, beta chain; DNA polymerase III subunit beta 1626..2741 Nitrosomonas sp. Is79A3 10932074 YP_004693311.1 CDS Nit79A3_0003 NC_015731.1 2824 5244 D TIGRFAM: DNA gyrase, subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; KEGG: nit:NAL212_0167 DNA gyrase, B subunit; SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; DNA gyrase subunit B 2824..5244 Nitrosomonas sp. Is79A3 10932075 YP_004693312.1 CDS Nit79A3_0004 NC_015731.1 5350 8253 D KEGG: SNF2-like protein; PFAM: SNF2-related; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SNF2-like protein 5350..8253 Nitrosomonas sp. Is79A3 10932076 YP_004693313.1 CDS Nit79A3_0005 NC_015731.1 8253 10058 D PFAM: Abortive phage infection; KEGG: abortive phage infection protein; Abortive phage infection protein 8253..10058 Nitrosomonas sp. Is79A3 10932077 YP_004693314.1 CDS Nit79A3_0006 NC_015731.1 10069 10185 D hypothetical protein 10069..10185 Nitrosomonas sp. Is79A3 10932078 YP_004693315.1 CDS Nit79A3_0007 NC_015731.1 10182 11237 D PFAM: Protein of unknown function DUF1016; KEGG: gpb:HDN1F_08370 protein of unknown function DUF1016; hypothetical protein 10182..11237 Nitrosomonas sp. Is79A3 10932079 YP_004693316.1 CDS Nit79A3_0008 NC_015731.1 11234 12922 D PFAM: DNA methylase N-4/N-6; KEGG: avn:Avin_52350 adenine specific DNA methylase N-4/N-6; DNA methylase N-4/N-6 domain-containing protein 11234..12922 Nitrosomonas sp. Is79A3 10932080 YP_004693317.1 CDS Nit79A3_0009 NC_015731.1 12922 13959 D KEGG: gpb:HDN1F_08410 hypothetical protein; hypothetical protein 12922..13959 Nitrosomonas sp. Is79A3 10932081 YP_004693318.1 CDS Nit79A3_0010 NC_015731.1 13956 16682 D PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: type III restriction protein res subunit; type III restriction protein res subunit 13956..16682 Nitrosomonas sp. Is79A3 10932082 YP_004693319.1 CDS Nit79A3_0011 NC_015731.1 16948 18027 D PFAM: WD40-like Beta Propeller; KEGG: neu:NE1761 hypothetical protein; hypothetical protein 16948..18027 Nitrosomonas sp. Is79A3 10932083 YP_004693320.1 CDS Nit79A3_0012 NC_015731.1 18087 19901 R KEGG: nit:NAL212_0169 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; GTP-binding protein TypA complement(18087..19901) Nitrosomonas sp. Is79A3 10932084 YP_004693321.1 CDS Nit79A3_0013 NC_015731.1 20272 20664 D KEGG: bba:Bd3611 hypothetical protein; hypothetical protein 20272..20664 Nitrosomonas sp. Is79A3 10932085 YP_004693322.1 CDS Nit79A3_0014 NC_015731.1 20757 20948 R KEGG: nit:NAL212_0171 hypothetical protein; hypothetical protein complement(20757..20948) Nitrosomonas sp. Is79A3 10932086 YP_004693323.1 CDS Nit79A3_0015 NC_015731.1 21109 21435 D KEGG: nit:NAL212_0172 CutA1 divalent ion tolerance protein; manually curated; PFAM: Divalent ion tolerance protein, CutA1; CutA1 divalent ion tolerance protein 21109..21435 Nitrosomonas sp. Is79A3 10932087 YP_004693324.1 CDS Nit79A3_0016 NC_015731.1 21452 23389 D KEGG: nit:NAL212_0173 protein-disulfide reductase; HAMAP: Thiol:disulfide interchange protein dsbD; PFAM: Cytochrome c assembly protein, transmembrane region; Thioredoxin domain; thiol:disulfide interchange protein DsbD 21452..23389 Nitrosomonas sp. Is79A3 10932088 YP_004693325.1 CDS Nit79A3_0017 NC_015731.1 23449 24039 D PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: nit:NAL212_0174 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 23449..24039 Nitrosomonas sp. Is79A3 10932089 YP_004693326.1 CDS Nit79A3_0018 NC_015731.1 24757 25086 D PFAM: Transport-associated; KEGG: nit:NAL212_0175 transport-associated protein; transport-associated protein 24757..25086 Nitrosomonas sp. Is79A3 10932090 YP_004693327.1 CDS Nit79A3_0019 NC_015731.1 25115 25492 D KEGG: nit:NAL212_0176 hypothetical protein; hypothetical protein 25115..25492 Nitrosomonas sp. Is79A3 10932091 YP_004693328.1 CDS Nit79A3_0020 NC_015731.1 25493 26398 R KEGG: nit:NAL212_0177 PP-loop domain-containing protein; HAMAP: tRNA 2-thiocytidine biosynthesis protein TtcA; PFAM: PP-loop; tRNA 2-thiocytidine biosynthesis protein TtcA complement(25493..26398) Nitrosomonas sp. Is79A3 10932092 YP_004693329.1 CDS Nit79A3_0021 NC_015731.1 26562 27014 D PFAM: Blue (type 1) copper domain; KEGG: nit:NAL212_0178 blue (type 1) copper domain-containing protein; blue (type 1) copper domain-containing protein 26562..27014 Nitrosomonas sp. Is79A3 10932093 YP_004693330.1 CDS Nit79A3_0022 NC_015731.1 27011 27550 D PFAM: Protein of unknown function DUF411; KEGG: nit:NAL212_0179 hypothetical protein; hypothetical protein 27011..27550 Nitrosomonas sp. Is79A3 10932094 YP_004693331.1 CDS Nit79A3_0023 NC_015731.1 27563 28030 D PFAM: Cytochrome c, class I; KEGG: nit:NAL212_0180 cytochrome c class I; cytochrome c class I 27563..28030 Nitrosomonas sp. Is79A3 10932095 YP_004693332.1 CDS Nit79A3_0024 NC_015731.1 28154 28543 R KEGG: nit:NAL212_0181 hypothetical protein; hypothetical protein complement(28154..28543) Nitrosomonas sp. Is79A3 10932096 YP_004693333.1 CDS Nit79A3_0025 NC_015731.1 28809 29123 D KEGG: net:Neut_0492 transport-associated; PFAM: Transport-associated; SMART: Transport-associated and nodulation region, bacteria; transport-associated protein 28809..29123 Nitrosomonas sp. Is79A3 10932097 YP_004693334.1 CDS Nit79A3_0026 NC_015731.1 29743 38709 D PFAM: Glycosyltransferase 36; carbohydrate binding; Glycosyltransferase 36 associated; KEGG: net:Neut_1665 glycosyltransferase 36; glycosyltransferase 36 29743..38709 Nitrosomonas sp. Is79A3 10932098 YP_004693335.1 CDS Nit79A3_0027 NC_015731.1 38684 39760 D KEGG: net:Neut_2089 transaldolase; TIGRFAM: Transaldolase subfamily; PFAM: Transaldolase; transaldolase 38684..39760 Nitrosomonas sp. Is79A3 10932099 YP_004693336.1 CDS Nit79A3_0028 NC_015731.1 39887 40192 D PFAM: Protein of unknown function DUF1840; KEGG: net:Neut_0486 hypothetical protein; hypothetical protein 39887..40192 Nitrosomonas sp. Is79A3 10932100 YP_004693337.1 CDS Nit79A3_0029 NC_015731.1 40288 41310 D KEGG: fri:FraEuI1c_1222 6-phosphogluconate dehydrogenase, decarboxylating; TIGRFAM: 6-phosphogluconate dehydrogenase related protein; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase 40288..41310 Nitrosomonas sp. Is79A3 10932101 YP_004693338.1 CDS Nit79A3_0030 NC_015731.1 41312 42736 D KEGG: rfr:Rfer_4034 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: Glucose-6-phosphate dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 41312..42736 Nitrosomonas sp. Is79A3 10932102 YP_004693339.1 CDS Nit79A3_0031 NC_015731.1 42797 43102 D PFAM: Protein of unknown function DUF1840; KEGG: net:Neut_0486 hypothetical protein; hypothetical protein 42797..43102 Nitrosomonas sp. Is79A3 10932103 YP_004693340.1 CDS Nit79A3_0032 NC_015731.1 43434 45200 D KEGG: rfr:Rfer_1145 phosphoglucomutase; TIGRFAM: Phosphoglucomutase, alpha-D-glucose specific; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; phosphoglucomutase, alpha-D-glucose phosphate-specific 43434..45200 Nitrosomonas sp. Is79A3 10932104 YP_004693341.1 CDS Nit79A3_0033 NC_015731.1 45243 47789 D KEGG: dat:HRM2_24160 GlgP3; TIGRFAM: Alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; alpha-glucan phosphorylase 45243..47789 Nitrosomonas sp. Is79A3 10932105 YP_004693342.1 CDS Nit79A3_0034 NC_015731.1 47908 50541 D KEGG: magnesium-importing ATPase; TIGRFAM: ATPase, P-type, magnesium-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; magnesium-translocating P-type ATPase 47908..50541 Nitrosomonas sp. Is79A3 10932106 YP_004693343.1 CDS Nit79A3_0035 NC_015731.1 50531 51772 D TIGRFAM: Acetate kinase; HAMAP: Acetate kinase; KEGG: nha:Nham_4372 acetate kinase; PFAM: Acetate/butyrate kinase; Acetate kinase 50531..51772 Nitrosomonas sp. Is79A3 10932107 YP_004693344.1 CDS Nit79A3_0036 NC_015731.1 51775 54144 D KEGG: dba:Dbac_1358 phosphoketolase; HAMAP: phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal; phosphoketolase 51775..54144 Nitrosomonas sp. Is79A3 10932108 YP_004693345.1 CDS Nit79A3_0037 NC_015731.1 54175 55431 D KEGG: dba:Dbac_0953 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2254, membrane; hypothetical protein 54175..55431 Nitrosomonas sp. Is79A3 10932109 YP_004693346.1 CDS Nit79A3_0038 NC_015731.1 55463 56902 D SMART: ATPase, AAA+ type, core; TIGRFAM: Alternate ATPase, F1 complex, beta subunit; ATPase, F1 complex, beta subunit; KEGG: rfr:Rfer_1161 F0F1 ATP synthase subunit beta; HAMAP: ATPase, F1 complex, beta subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit beta 55463..56902 Nitrosomonas sp. Is79A3 10932110 YP_004693347.1 CDS Nit79A3_0039 NC_015731.1 56877 57281 D KEGG: rfr:Rfer_1162 F0F1 ATP synthase subunit epsilon; TIGRFAM: alternate F1F0 ATPase, F1 subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; alternate F1F0 ATPase, F1 subunit epsilon 56877..57281 Nitrosomonas sp. Is79A3 10932111 YP_004693348.1 CDS Nit79A3_0040 NC_015731.1 57274 57612 D KEGG: mmw:Mmwyl1_1956 F0F1-ATPase subunit; TIGRFAM: F0F1-ATPase subunit, PFAM: F0F1-ATPase subunit; F0F1-ATPase subunit 57274..57612 Nitrosomonas sp. Is79A3 10932112 YP_004693349.1 CDS Nit79A3_0041 NC_015731.1 57605 57916 D TIGRFAM: ATPase, F1/F0 complex, subunit 2, Methanosarcina type; KEGG: dba:Dbac_0949 F1/F0 ATPase; F1/F0 ATPase, Methanosarcina type subunit 2 57605..57916 Nitrosomonas sp. Is79A3 10932113 YP_004693350.1 CDS Nit79A3_0042 NC_015731.1 57906 58607 D TIGRFAM: Alternate ATPase, F0 complex, subunit A; ATPase, F0 complex, subunit A; HAMAP: ATP synthase subunit a; KEGG: rfr:Rfer_1165 F0F1 ATP synthase subunit A; PFAM: ATPase, F0 complex, subunit A; ATP synthase subunit a 57906..58607 Nitrosomonas sp. Is79A3 10932114 YP_004693351.1 CDS Nit79A3_0043 NC_015731.1 58632 58913 D TIGRFAM: Alternate ATPase, F0 complex, subunit C; ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: mmw:Mmwyl1_1959 F0F1 ATP synthase subunit C; PFAM: ATPase, F0/V0 complex, subunit C; ATP synthase subunit c 58632..58913 Nitrosomonas sp. Is79A3 10932115 YP_004693352.1 CDS Nit79A3_0044 NC_015731.1 58917 59957 D TIGRFAM: Alternate ATPase, F0 complex, subunit B; HAMAP: ATP synthase subunit b; KEGG: rfr:Rfer_1167 H+-transporting two-sector ATPase, B/B' subunit; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; ATP synthase subunit b 58917..59957 Nitrosomonas sp. Is79A3 10932116 YP_004693353.1 CDS Nit79A3_0045 NC_015731.1 59960 61561 D TIGRFAM: Alternate ATPase, F1 complex, alpha subunit; ATPase, F1 complex, alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; KEGG: rfr:Rfer_1168 F0F1 ATP synthase subunit alpha; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit alpha 59960..61561 Nitrosomonas sp. Is79A3 10932117 YP_004693354.1 CDS Nit79A3_0046 NC_015731.1 61558 62505 D KEGG: dba:Dbac_0944 alternate F1F0 ATPase, F1 subunit gamma; TIGRFAM: Alternate ATPase, F1 complex, subunit gamma; PFAM: ATPase, F1 complex, gamma subunit; alternate F1F0 ATPase, F1 subunit gamma 61558..62505 Nitrosomonas sp. Is79A3 10932118 YP_004693355.1 CDS Nit79A3_0047 NC_015731.1 62610 63488 D KEGG: app:CAP2UW1_3404 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase 62610..63488 Nitrosomonas sp. Is79A3 10932119 YP_004693356.1 CDS Nit79A3_0048 NC_015731.1 63716 64339 R PFAM: Cell wall hydrolase, SleB; KEGG: nit:NAL212_3139 cell wall hydrolase SleB; cell wall hydrolase SleB complement(63716..64339) Nitrosomonas sp. Is79A3 10932120 YP_004693357.1 CDS Nit79A3_0049 NC_015731.1 64567 66150 R KEGG: nit:NAL212_0062 transposase IS66; manually curated; PFAM: Transposase, IS66; transposase IS66 complement(64567..66150) Nitrosomonas sp. Is79A3 10932121 YP_004693358.1 CDS Nit79A3_0050 NC_015731.1 66200 66547 R KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein complement(66200..66547) Nitrosomonas sp. Is79A3 10932122 YP_004693359.1 CDS Nit79A3_0051 NC_015731.1 66538 66828 R KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein complement(66538..66828) Nitrosomonas sp. Is79A3 10932123 YP_004693360.1 CDS Nit79A3_0053 NC_015731.1 67487 68041 R KEGG: nit:NAL212_1338 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(67487..68041) Nitrosomonas sp. Is79A3 10932125 YP_004693361.1 CDS Nit79A3_0055 NC_015731.1 69143 70342 R KEGG: nit:NAL212_2784 catalase related subgroup domain-containing protein; catalase related subgroup domain-containing protein complement(69143..70342) Nitrosomonas sp. Is79A3 10932127 YP_004693362.1 CDS Nit79A3_0056 NC_015731.1 70384 71586 R PFAM: Protein of unknown function DUF1207; KEGG: neu:NE1230 hypothetical protein; hypothetical protein complement(70384..71586) Nitrosomonas sp. Is79A3 10932128 YP_004693363.1 CDS Nit79A3_0057 NC_015731.1 71919 72131 D KEGG: har:HEAR2625 lipoprotein; lipoprotein 71919..72131 Nitrosomonas sp. Is79A3 10932129 YP_004693364.1 CDS Nit79A3_0058 NC_015731.1 72279 74411 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; Signal transduction response regulator, receiver region; KEGG: tsa:AciPR4_0617 response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 72279..74411 Nitrosomonas sp. Is79A3 10932130 YP_004693365.1 CDS Nit79A3_0059 NC_015731.1 75506 76381 D PFAM: Protein of unknown function DUF2063; Protein of unknown function DUF692; KEGG: nmu:Nmul_A2549 hypothetical protein; hypothetical protein 75506..76381 Nitrosomonas sp. Is79A3 10932131 YP_004693366.1 CDS Nit79A3_0060 NC_015731.1 76501 77541 D KEGG: mca:MCA0084 hypothetical protein; hypothetical protein 76501..77541 Nitrosomonas sp. Is79A3 10932132 YP_004693367.1 CDS Nit79A3_0061 NC_015731.1 77738 78598 R PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: shw:Sputw3181_2243 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein complement(77738..78598) Nitrosomonas sp. Is79A3 10932133 YP_004693368.1 CDS Nit79A3_0062 NC_015731.1 78595 79011 R KEGG: hypothetical protein; hypothetical protein complement(78595..79011) Nitrosomonas sp. Is79A3 10932134 YP_004693369.1 CDS Nit79A3_0063 NC_015731.1 79473 80213 R PFAM: Cyclic nucleotide-binding; KEGG: cyclic nucleotide-binding domain-containing protein; Crp/Fnr family transcriptional regulator complement(79473..80213) Nitrosomonas sp. Is79A3 10932135 YP_004693370.1 CDS Nit79A3_0064 NC_015731.1 80452 81180 R KEGG: net:Neut_0491 transcriptional regulator, Crp/Fnr family protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; Crp/Fnr family transcriptional regulator complement(80452..81180) Nitrosomonas sp. Is79A3 10932136 YP_004693371.1 CDS Nit79A3_0065 NC_015731.1 81538 81681 D KEGG: cli:Clim_0907 hypothetical protein; hypothetical protein 81538..81681 Nitrosomonas sp. Is79A3 10932137 YP_004693372.1 CDS Nit79A3_0066 NC_015731.1 81736 81954 D KEGG: har:HEAR0765 hypothetical protein; hypothetical protein 81736..81954 Nitrosomonas sp. Is79A3 10932138 YP_004693373.1 CDS Nit79A3_0067 NC_015731.1 82255 82485 D KEGG: net:Neut_0490 hypothetical protein; hypothetical protein 82255..82485 Nitrosomonas sp. Is79A3 10932139 YP_004693374.1 CDS Nit79A3_0068 NC_015731.1 82552 82854 D KEGG: net:Neut_0488 hypothetical protein; hypothetical protein 82552..82854 Nitrosomonas sp. Is79A3 10932140 YP_004693375.1 CDS Nit79A3_0069 NC_015731.1 83069 84265 D KEGG: nit:NAL212_1623 hypothetical protein; hypothetical protein 83069..84265 Nitrosomonas sp. Is79A3 10932141 YP_004693376.1 CDS Nit79A3_0070 NC_015731.1 84536 85642 D PFAM: Uncharacterised protein family UPF0118; KEGG: nit:NAL212_2783 hypothetical protein; hypothetical protein 84536..85642 Nitrosomonas sp. Is79A3 10932142 YP_004693377.1 CDS Nit79A3_0071 NC_015731.1 86165 86452 D PFAM: Protein of unknown function DUF883, ElaB; KEGG: nit:NAL212_2781 hypothetical protein; hypothetical protein 86165..86452 Nitrosomonas sp. Is79A3 10932143 YP_004693378.1 CDS Nit79A3_0072 NC_015731.1 86466 86945 D KEGG: nit:NAL212_2780 hypothetical protein; hypothetical protein 86466..86945 Nitrosomonas sp. Is79A3 10932144 YP_004693379.1 CDS Nit79A3_0073 NC_015731.1 87054 88076 D PFAM: Ketopantoate reductase ApbA/PanE, C-terminal; Ketopantoate reductase ApbA/PanE, N-terminal; KEGG: nit:NAL212_1794 ketopantoate reductase ApbA/PanE domain-containing protein; Ketopantoate reductase ApbA/PanE domain-containing protein 87054..88076 Nitrosomonas sp. Is79A3 10932145 YP_004693380.1 CDS Nit79A3_0074 NC_015731.1 88073 89059 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: nit:NAL212_1793 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 88073..89059 Nitrosomonas sp. Is79A3 10932146 YP_004693381.1 CDS Nit79A3_0075 NC_015731.1 89097 91052 R KEGG: net:Neut_2188 arginine decarboxylase; TIGRFAM: Arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; arginine decarboxylase complement(89097..91052) Nitrosomonas sp. Is79A3 10932147 YP_004693382.1 CDS Nit79A3_0076 NC_015731.1 91049 92002 R KEGG: net:Neut_2187 agmatinase; TIGRFAM: agmatinase; PFAM: Ureohydrolase; agmatinase complement(91049..92002) Nitrosomonas sp. Is79A3 10932148 YP_004693383.1 CDS Nit79A3_0077 NC_015731.1 92294 92758 R KEGG: nit:NAL212_2786 hypothetical protein; hypothetical protein complement(92294..92758) Nitrosomonas sp. Is79A3 10932149 YP_004693384.1 CDS Nit79A3_0078 NC_015731.1 93400 93813 D KEGG: dar:Daro_2088 hypothetical protein; hypothetical protein 93400..93813 Nitrosomonas sp. Is79A3 10932150 YP_004693385.1 CDS Nit79A3_0079 NC_015731.1 94251 94670 D PFAM: PRC-barrel; KEGG: net:Neut_2352 PRC-barrel domain-containing protein; PRC-barrel domain-containing protein 94251..94670 Nitrosomonas sp. Is79A3 10932151 YP_004693386.1 CDS Nit79A3_0080 NC_015731.1 95252 95539 D PFAM: Protein of unknown function DUF883, ElaB; KEGG: nit:NAL212_2781 hypothetical protein; hypothetical protein 95252..95539 Nitrosomonas sp. Is79A3 10932152 YP_004693387.1 CDS Nit79A3_0081 NC_015731.1 95798 96691 R KEGG: nmu:Nmul_A2420 hypothetical protein; hypothetical protein complement(95798..96691) Nitrosomonas sp. Is79A3 10932153 YP_004693388.1 CDS Nit79A3_0082 NC_015731.1 97022 97180 R KEGG: rfr:Rfer_1879 hypothetical protein; hypothetical protein complement(97022..97180) Nitrosomonas sp. Is79A3 10932154 YP_004693389.1 CDS Nit79A3_0083 NC_015731.1 97202 98392 R PFAM: Fatty acid desaturase, type 1; KEGG: net:Neut_0779 fatty acid desaturase; fatty acid desaturase complement(97202..98392) Nitrosomonas sp. Is79A3 10932155 YP_004693390.1 CDS Nit79A3_0084 NC_015731.1 98612 99355 D KEGG: mep:MPQ_2599 transcriptional regulator, crp/fnr family; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 98612..99355 Nitrosomonas sp. Is79A3 10932156 YP_004693391.1 CDS Nit79A3_0085 NC_015731.1 99431 100108 R TIGRFAM: ABC transporter ATP-binding subunit, DevA type; PFAM: ABC transporter-like; KEGG: cyh:Cyan8802_3799 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; DevA family ABC exporter ATP-binding subunit complement(99431..100108) Nitrosomonas sp. Is79A3 10932157 YP_004693392.1 CDS Nit79A3_0086 NC_015731.1 100119 101282 R KEGG: ana:alr3711 heterocyst specific ABC-transporter, membrane spanning subunit; TIGRFAM: DevC protein; PFAM: Protein of unknown function DUF214, permase predicted; DevC protein complement(100119..101282) Nitrosomonas sp. Is79A3 10932158 YP_004693393.1 CDS Nit79A3_0087 NC_015731.1 101285 102181 R TIGRFAM: ABC transporter membrane fusion protein, DevB type; KEGG: cyn:Cyan7425_0330 DevB family ABC exporter membrane fusion protein; DevB family ABC exporter membrane fusion protein complement(101285..102181) Nitrosomonas sp. Is79A3 10932159 YP_004693394.1 CDS Nit79A3_0088 NC_015731.1 102271 105876 R PFAM: Sulphatase-modifying factor; NACHT nucleoside triphosphatase; KEGG: app:CAP2UW1_2323 hypothetical protein; sulfatase-modifying factor protein complement(102271..105876) Nitrosomonas sp. Is79A3 10932160 YP_004693395.1 CDS Nit79A3_0089 NC_015731.1 106122 106451 D PFAM: NTP pyrophosphohydrolase MazG, catalytic core; KEGG: nit:NAL212_3178 MazG nucleotide pyrophosphohydrolase; nucleotide pyrophosphohydrolase 106122..106451 Nitrosomonas sp. Is79A3 10932161 YP_004693396.1 CDS Nit79A3_0090 NC_015731.1 106478 107626 R PFAM: Methyltransferase small; KEGG: nit:NAL212_3177 methyltransferase small; methyltransferase small complement(106478..107626) Nitrosomonas sp. Is79A3 10932162 YP_004693397.1 CDS Nit79A3_0091 NC_015731.1 107843 109180 D KEGG: nit:NAL212_3176 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 107843..109180 Nitrosomonas sp. Is79A3 10932163 YP_004693398.1 CDS Nit79A3_0092 NC_015731.1 109216 109740 R PFAM: Protein of unknown function DUF192; KEGG: nit:NAL212_3175 hypothetical protein; hypothetical protein complement(109216..109740) Nitrosomonas sp. Is79A3 10932164 YP_004693399.1 CDS Nit79A3_0093 NC_015731.1 109750 112956 R KEGG: nit:NAL212_3174 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(109750..112956) Nitrosomonas sp. Is79A3 10932165 YP_004693400.1 CDS Nit79A3_0094 NC_015731.1 112953 114194 R KEGG: nit:NAL212_3173 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(112953..114194) Nitrosomonas sp. Is79A3 10932166 YP_004693401.1 CDS Nit79A3_0095 NC_015731.1 114344 115738 R KEGG: nit:NAL212_3171 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; RND efflux system, outer membrane lipoprotein, NodT family complement(114344..115738) Nitrosomonas sp. Is79A3 10932167 YP_004693402.1 CDS Nit79A3_0096 NC_015731.1 116032 117834 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; GAF; KEGG: eba:ebA163 sensory box/GGDEF family protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; GAF; GAF sensor-containing diguanylate cyclase/phosphodiesterase 116032..117834 Nitrosomonas sp. Is79A3 10932168 YP_004693403.1 CDS Nit79A3_0097 NC_015731.1 118137 120035 D TIGRFAM: Glucose-inhibited division protein A; HAMAP: Glucose-inhibited division protein A; KEGG: nit:NAL212_3161 glucose inhibited division protein A; PFAM: Glucose-inhibited division protein A-related; tRNA uridine 5-carboxymethylaminomethyl modification protein mnmG 118137..120035 Nitrosomonas sp. Is79A3 10932169 YP_004693404.1 CDS Nit79A3_0098 NC_015731.1 120032 120670 D TIGRFAM: rRNA small subunit methyltransferase G; HAMAP: rRNA small subunit methyltransferase G; KEGG: nit:NAL212_3160 methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G; Ribosomal RNA small subunit methyltransferase G 120032..120670 Nitrosomonas sp. Is79A3 10932170 YP_004693405.1 CDS Nit79A3_0099 NC_015731.1 120730 121488 D PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: nit:NAL212_3159 cobyrinic acid ac-diamide synthase; Cobyrinic acid ac-diamide synthase 120730..121488 Nitrosomonas sp. Is79A3 10932171 YP_004693406.1 CDS Nit79A3_0100 NC_015731.1 121513 122352 D TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: nit:NAL212_3158 ParB-like partition protein; SMART: ParB-like nuclease; parB-like partition protein 121513..122352 Nitrosomonas sp. Is79A3 10932172 YP_004693407.1 CDS Nit79A3_0101 NC_015731.1 122393 122575 D KEGG: nit:NAL212_3157 hypothetical protein; HAMAP: UPF0434 protein ycaR; PFAM: Protein of unknown function DUF343; hypothetical protein 122393..122575 Nitrosomonas sp. Is79A3 10932173 YP_004693408.1 CDS Nit79A3_0102 NC_015731.1 122597 123565 D PFAM: ADP-ribosylation/Crystallin J1; KEGG: nit:NAL212_3156 ADP-ribosylation/crystallin J1; ADP-ribosylation/Crystallin J1 122597..123565 Nitrosomonas sp. Is79A3 10932174 YP_004693409.1 CDS Nit79A3_0103 NC_015731.1 123840 124790 D PFAM: HpcH/HpaI aldolase; KEGG: nit:NAL212_0420 citryl-CoA lyase; HpcH/HpaI aldolase 123840..124790 Nitrosomonas sp. Is79A3 10932175 YP_004693410.1 CDS Nit79A3_0104 NC_015731.1 125031 126212 D TIGRFAM: Succinyl-CoA synthetase, beta subunit; HAMAP: Succinyl-CoA ligase [ADP-forming] subunit beta; KEGG: nit:NAL212_0421 succinyl-CoA ligase (ADP-forming) subunit beta; PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; Succinyl-CoA ligase (ADP-forming) subunit beta 125031..126212 Nitrosomonas sp. Is79A3 10932176 YP_004693411.1 CDS Nit79A3_0105 NC_015731.1 126222 127109 D KEGG: nit:NAL212_0422 succinyl-CoA synthetase, alpha subunit; TIGRFAM: Succinyl-CoA ligase, alpha subunit; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit alpha 126222..127109 Nitrosomonas sp. Is79A3 10932177 YP_004693412.1 CDS Nit79A3_0106 NC_015731.1 127229 127855 D TIGRFAM: Uncharacterised protein family UPF0114, bacteria; HAMAP: Uncharacterised protein family UPF0114, gammaproteobacteria; KEGG: nit:NAL212_0425 hypothetical protein; PFAM: Uncharacterised protein family UPF0114, prokaryotic; hypothetical protein 127229..127855 Nitrosomonas sp. Is79A3 10932178 YP_004693413.1 CDS Nit79A3_0107 NC_015731.1 127873 128403 R KEGG: nit:NAL212_0427 CinA domain-containing protein; TIGRFAM: CinA, C-terminal; PFAM: CinA, C-terminal; CinA domain-containing protein complement(127873..128403) Nitrosomonas sp. Is79A3 10932179 YP_004693414.1 CDS Nit79A3_0108 NC_015731.1 128539 129651 D PFAM: Acyltransferase 3; KEGG: mms:mma_0056 hypothetical protein; acyltransferase 128539..129651 Nitrosomonas sp. Is79A3 10932180 YP_004693415.1 CDS Nit79A3_0109 NC_015731.1 129797 130330 D KEGG: mpt:Mpe_A2251 hypothetical protein; hypothetical protein 129797..130330 Nitrosomonas sp. Is79A3 10932181 YP_004693416.1 CDS Nit79A3_0110 NC_015731.1 130375 131199 R PFAM: Alpha/beta hydrolase fold-1; KEGG: nit:NAL212_0428 hypothetical protein; alpha/beta hydrolase complement(130375..131199) Nitrosomonas sp. Is79A3 10932182 YP_004693417.1 CDS Nit79A3_0111 NC_015731.1 131210 131752 R PFAM: Protein of unknown function DUF2141; KEGG: nit:NAL212_0429 hypothetical protein; hypothetical protein complement(131210..131752) Nitrosomonas sp. Is79A3 10932183 YP_004693418.1 CDS Nit79A3_0112 NC_015731.1 131819 133885 D PFAM: DNA methylase, adenine-specific; KEGG: slt:Slit_2437 N-6 DNA methylase; N-6 DNA methylase 131819..133885 Nitrosomonas sp. Is79A3 10932184 YP_004693419.1 CDS Nit79A3_0113 NC_015731.1 133885 135090 D PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: gfo:GFO_2591 type I restriction-modification system DNA specificity subunit; restriction modification system DNA specificity domain-containing protein 133885..135090 Nitrosomonas sp. Is79A3 10932185 YP_004693420.1 CDS Nit79A3_0114 NC_015731.1 135110 135532 R PFAM: PilT protein, N-terminal; KEGG: nit:NAL212_0432 PilT protein domain-containing protein; twitching motility protein PilT complement(135110..135532) Nitrosomonas sp. Is79A3 10932186 YP_004693421.1 CDS Nit79A3_0115 NC_015731.1 135529 135780 R TIGRFAM: Prevent-host-death protein; KEGG: nit:NAL212_0433 prevent-host-death family protein; prevent-host-death family protein complement(135529..135780) Nitrosomonas sp. Is79A3 10932187 YP_004693422.1 CDS Nit79A3_0116 NC_015731.1 135915 137048 D PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: cch:Cag_2003 fic family protein; Fic family protein 135915..137048 Nitrosomonas sp. Is79A3 10932188 YP_004693423.1 CDS Nit79A3_0117 NC_015731.1 137121 140348 D TIGRFAM: Restriction endonuclease, type I, EcoRI, R subunit; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: nit:NAL212_0436 type I site-specific deoxyribonuclease, HsdR family; SMART: DEAD-like helicase, N-terminal; type I site-specific deoxyribonuclease, HsdR family 137121..140348 Nitrosomonas sp. Is79A3 10932189 YP_004693424.1 CDS Nit79A3_0118 NC_015731.1 140366 141502 R KEGG: nit:NAL212_2929 twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; twitching motility protein complement(140366..141502) Nitrosomonas sp. Is79A3 10932190 YP_004693425.1 CDS Nit79A3_0119 NC_015731.1 141536 142579 R TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: nit:NAL212_2928 twitching motility protein; SMART: ATPase, AAA+ type, core; twitching motility protein complement(141536..142579) Nitrosomonas sp. Is79A3 10932191 YP_004693426.1 CDS Nit79A3_0120 NC_015731.1 142809 144053 R PFAM: Diguanylate phosphodiesterase, predicted; Metal-dependent hydrolase HDOD; KEGG: nit:NAL212_0455 diguanylate phosphodiesterase metal dependent hydrolase domain; diguanylate phosphodiesterase with metal dependent hydrolase domain complement(142809..144053) Nitrosomonas sp. Is79A3 10932192 YP_004693427.1 CDS Nit79A3_0121 NC_015731.1 144290 145201 R PFAM: Metal-dependent hydrolase HDOD; KEGG: nit:NAL212_0454 metal dependent phosphohydrolase; signal transduction protein complement(144290..145201) Nitrosomonas sp. Is79A3 10932193 YP_004693428.1 CDS Nit79A3_0122 NC_015731.1 145393 145644 R PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: nit:NAL212_0453 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin complement(145393..145644) Nitrosomonas sp. Is79A3 10932194 YP_004693429.1 CDS Nit79A3_0123 NC_015731.1 145658 146137 R TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; HAMAP: Coenzyme A biosynthesis protein; KEGG: nit:NAL212_0452 pantetheine-phosphate adenylyltransferase; PFAM: Cytidylyltransferase; Phosphopantetheine adenylyltransferase complement(145658..146137) Nitrosomonas sp. Is79A3 10932195 YP_004693430.1 CDS Nit79A3_0124 NC_015731.1 146130 146684 R KEGG: nit:NAL212_0451 methyltransferase; TIGRFAM: Conserved hypothetical protein CHP00095; PFAM: Protein of unknown function methylase; methyltransferase complement(146130..146684) Nitrosomonas sp. Is79A3 10932196 YP_004693431.1 CDS Nit79A3_0125 NC_015731.1 146696 148000 R PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: nit:NAL212_0450 peptidase M16 domain-containing protein; peptidase M16 domain-containing protein complement(146696..148000) Nitrosomonas sp. Is79A3 10932197 YP_004693432.1 CDS Nit79A3_0126 NC_015731.1 148044 150839 R KEGG: nit:NAL212_0449 phosphoenolpyruvate carboxylase; HAMAP: Phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase; Phosphoenolpyruvate carboxylase complement(148044..150839) Nitrosomonas sp. Is79A3 10932198 YP_004693433.1 CDS Nit79A3_0127 NC_015731.1 150962 151918 D TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: nit:NAL212_0448 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; porphobilinogen deaminase 150962..151918 Nitrosomonas sp. Is79A3 10932199 YP_004693434.1 CDS Nit79A3_0128 NC_015731.1 151921 152715 D PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; KEGG: nit:NAL212_0447 uroporphyrinogen III synthase HEM4; Uroporphyrinogen III synthase HEM4 151921..152715 Nitrosomonas sp. Is79A3 10932200 YP_004693435.1 CDS Nit79A3_0129 NC_015731.1 152858 154033 D PFAM: HemY, N-terminal; KEGG: nit:NAL212_0446 HemY domain-containing protein; HemY domain-containing protein 152858..154033 Nitrosomonas sp. Is79A3 10932201 YP_004693436.1 CDS Nit79A3_0130 NC_015731.1 154039 155094 R PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; Ferredoxin; KEGG: nit:NAL212_0445 ferredoxin--NAD(+) reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(154039..155094) Nitrosomonas sp. Is79A3 10932202 YP_004693437.1 CDS Nit79A3_0131 NC_015731.1 155142 156038 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: nit:NAL212_0444 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 155142..156038 Nitrosomonas sp. Is79A3 10932203 YP_004693438.1 CDS Nit79A3_0132 NC_015731.1 156225 157448 D PFAM: Type II secretion system F domain; KEGG: nit:NAL212_0443 type II secretion system F domain; Type II secretion system F domain-containing protein 156225..157448 Nitrosomonas sp. Is79A3 10932204 YP_004693439.1 CDS Nit79A3_0133 NC_015731.1 157502 158347 D PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV; KEGG: nit:NAL212_0442 prepilin peptidase; peptidase A24A domain-containing protein 157502..158347 Nitrosomonas sp. Is79A3 10932205 YP_004693440.1 CDS Nit79A3_0134 NC_015731.1 158351 158971 D KEGG: nit:NAL212_0441 dephospho-CoA kinase; TIGRFAM: Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; Dephospho-CoA kinase 158351..158971 Nitrosomonas sp. Is79A3 10932206 YP_004693441.1 CDS Nit79A3_0135 NC_015731.1 159073 159828 D KEGG: nit:NAL212_0440 hypothetical protein; HAMAP: UPF0289 protein yacF; PFAM: Protein of unknown function DUF1342; hypothetical protein 159073..159828 Nitrosomonas sp. Is79A3 10932207 YP_004693442.1 CDS Nit79A3_0136 NC_015731.1 160018 162591 R KEGG: nit:NAL212_0456 cyanophycin synthetase; TIGRFAM: Cyanophycin synthetase; PFAM: Mur ligase, central; ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; Mur ligase, C-terminal; cyanophycin synthetase complement(160018..162591) Nitrosomonas sp. Is79A3 10932208 YP_004693443.1 CDS Nit79A3_0137 NC_015731.1 162588 164918 R KEGG: nit:NAL212_0457 cyanophycin synthetase; TIGRFAM: Cyanophycin synthetase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Mur ligase, central; cyanophycin synthetase complement(162588..164918) Nitrosomonas sp. Is79A3 10932209 YP_004693444.1 CDS Nit79A3_0138 NC_015731.1 165223 166287 D PFAM: Integrase, catalytic core; KEGG: ppu:PP_4459 transposase; Integrase catalytic subunit 165223..166287 Nitrosomonas sp. Is79A3 10932210 YP_004693445.1 CDS Nit79A3_0139 NC_015731.1 166510 167793 D PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; KEGG: nit:NAL212_0458 hypothetical protein; hypothetical protein 166510..167793 Nitrosomonas sp. Is79A3 10932211 YP_004693446.1 CDS Nit79A3_0140 NC_015731.1 168203 168802 D KEGG: nit:NAL212_0462 riboflavin synthase, alpha subunit; TIGRFAM: Lumazine-binding protein; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha 168203..168802 Nitrosomonas sp. Is79A3 10932213 YP_004693447.1 CDS Nit79A3_0141 NC_015731.1 168825 169925 D TIGRFAM: DHBP synthase RibB; HAMAP: 3,4-dihydroxy-2-butanone 4-phosphate synthase; KEGG: nit:NAL212_0463 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: DHBP synthase RibB; GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 168825..169925 Nitrosomonas sp. Is79A3 10932214 YP_004693448.1 CDS Nit79A3_0142 NC_015731.1 169989 170471 D TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: nit:NAL212_0464 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 169989..170471 Nitrosomonas sp. Is79A3 10932215 YP_004693449.1 CDS Nit79A3_0143 NC_015731.1 170468 170968 D TIGRFAM: NusB antitermination factor; HAMAP: N utilization substance protein B-like protein; KEGG: nit:NAL212_0465 NusB antitermination factor; PFAM: NusB/RsmB/TIM44; NusB antitermination factor 170468..170968 Nitrosomonas sp. Is79A3 10932216 YP_004693450.1 CDS Nit79A3_0144 NC_015731.1 170981 171952 D KEGG: nit:NAL212_0466 thiamine-monophosphate kinase; TIGRFAM: Thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; thiamine-monophosphate kinase 170981..171952 Nitrosomonas sp. Is79A3 10932217 YP_004693451.1 CDS Nit79A3_0145 NC_015731.1 171933 172481 D PFAM: Phosphatidylglycerophosphatase A; KEGG: nit:NAL212_0467 phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 171933..172481 Nitrosomonas sp. Is79A3 10932218 YP_004693452.1 CDS Nit79A3_0146 NC_015731.1 172511 172711 R PFAM: Protein of unknown function DUF466; KEGG: nit:NAL212_0284 hypothetical protein; hypothetical protein complement(172511..172711) Nitrosomonas sp. Is79A3 10932219 YP_004693453.1 CDS Nit79A3_0147 NC_015731.1 172730 174802 R PFAM: Carbon starvation protein CstA; KEGG: nit:NAL212_0285 carbon starvation protein CstA; carbon starvation protein CstA complement(172730..174802) Nitrosomonas sp. Is79A3 10932220 YP_004693454.1 CDS Nit79A3_0148 NC_015731.1 174854 176236 R KEGG: nit:NAL212_0468 anion transporter; TIGRFAM: Sodium/sulphate symporter; PFAM: Sodium/sulphate symporter; anion transporter complement(174854..176236) Nitrosomonas sp. Is79A3 10932221 YP_004693455.1 CDS Nit79A3_0149 NC_015731.1 176626 178128 R KEGG: nit:NAL212_0653 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; PAS fold-4; SMART: Diguanylate phosphodiesterase, predicted; diguanylate phosphodiesterase complement(176626..178128) Nitrosomonas sp. Is79A3 10932222 YP_004693456.1 CDS Nit79A3_0150 NC_015731.1 178147 179190 R PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; KEGG: nit:NAL212_0654 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase complement(178147..179190) Nitrosomonas sp. Is79A3 10932223 YP_004693457.1 CDS Nit79A3_0151 NC_015731.1 179522 180769 D KEGG: nit:NAL212_0655 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: Isocitrate dehydrogenase NADP-dependent, prokaryotic; PFAM: Isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase, NADP-dependent 179522..180769 Nitrosomonas sp. Is79A3 10932224 YP_004693458.1 CDS Nit79A3_0152 NC_015731.1 180983 181186 R KEGG: nmu:Nmul_A2246 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein complement(180983..181186) Nitrosomonas sp. Is79A3 10932225 YP_004693459.1 CDS Nit79A3_0153 NC_015731.1 181475 181783 D KEGG: nit:NAL212_0658 ATP-dependent Clp protease adaptor protein ClpS; HAMAP: ATP-dependent Clp protease adapter protein clpS; PFAM: Adaptor protein ClpS, core; ATP-dependent Clp protease adapter protein clpS 181475..181783 Nitrosomonas sp. Is79A3 10932226 YP_004693460.1 CDS Nit79A3_0154 NC_015731.1 181785 184043 D TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: nit:NAL212_0659 ATP-dependent Clp protease, ATP-binding subunit ClpA; SMART: ATPase, AAA+ type, core; ATP-dependent Clp protease ATP-binding subunit ClpA 181785..184043 Nitrosomonas sp. Is79A3 10932227 YP_004693461.1 CDS Nit79A3_0155 NC_015731.1 184275 185627 D PFAM: Transposase, IS4-like; KEGG: tin:Tint_1940 transposase IS4 family protein; transposase IS4 family protein 184275..185627 Nitrosomonas sp. Is79A3 10932228 YP_004693462.1 CDS Nit79A3_0156 NC_015731.1 185893 187191 R PFAM: Transposase, IS4-like; KEGG: afe:Lferr_1749 hypothetical protein; transposase IS4 family protein complement(185893..187191) Nitrosomonas sp. Is79A3 10932229 YP_004693463.1 CDS Nit79A3_0157 NC_015731.1 187145 187528 R KEGG: afr:AFE_2095 hypothetical protein; hypothetical protein complement(187145..187528) Nitrosomonas sp. Is79A3 10932230 YP_004693464.1 CDS Nit79A3_0158 NC_015731.1 187521 188912 R PFAM: Transposase, IS4-like; KEGG: gur:Gura_1234 hypothetical protein; transposase IS4 family protein complement(187521..188912) Nitrosomonas sp. Is79A3 10932231 YP_004693465.1 CDS Nit79A3_0159 NC_015731.1 189146 190108 R PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein complement(189146..190108) Nitrosomonas sp. Is79A3 10932232 YP_004693466.1 CDS Nit79A3_0160 NC_015731.1 190603 190806 R hypothetical protein complement(190603..190806) Nitrosomonas sp. Is79A3 10932233 YP_004693467.1 CDS Nit79A3_0161 NC_015731.1 191068 192315 D PFAM: Serine hydroxymethyltransferase; KEGG: nit:NAL212_2908 glycine hydroxymethyltransferase; glycine hydroxymethyltransferase 191068..192315 Nitrosomonas sp. Is79A3 10932234 YP_004693468.1 CDS Nit79A3_0162 NC_015731.1 192382 192840 D TIGRFAM: Ribonucleotide reductase regulator NrdR-like; HAMAP: Transcriptional repressor nrdR; KEGG: nit:NAL212_2907 ribonucleotide reductase regulator NrdR-like protein; PFAM: ATP-cone; Transcriptional repressor nrdR 192382..192840 Nitrosomonas sp. Is79A3 10932235 YP_004693469.1 CDS Nit79A3_0163 NC_015731.1 192949 194040 D TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: nit:NAL212_2906 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding; riboflavin biosynthesis protein RibD 192949..194040 Nitrosomonas sp. Is79A3 10932236 YP_004693470.1 CDS Nit79A3_0164 NC_015731.1 194052 194612 R KEGG: nit:NAL212_2905 two component transcriptional regulator, Fis family; PFAM: Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; Fis family transcriptional regulator complement(194052..194612) Nitrosomonas sp. Is79A3 10932237 YP_004693471.1 CDS Nit79A3_0165 NC_015731.1 194618 195877 R KEGG: nit:NAL212_2904 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase complement(194618..195877) Nitrosomonas sp. Is79A3 10932238 YP_004693472.1 CDS Nit79A3_0166 NC_015731.1 196208 197326 D PFAM: DAHP synthetase I/KDSA; KEGG: nit:NAL212_2903 3-deoxy-7-phosphoheptulonate synthase; DAHP synthetase I/KDSA 196208..197326 Nitrosomonas sp. Is79A3 10932239 YP_004693473.1 CDS Nit79A3_0167 NC_015731.1 197429 198373 D TIGRFAM: LytB protein; HAMAP: LytB protein; KEGG: nit:NAL212_2902 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 197429..198373 Nitrosomonas sp. Is79A3 10932240 YP_004693474.1 CDS Nit79A3_0168 NC_015731.1 198359 199486 R KEGG: nit:NAL212_2901 glycine oxidase ThiO; TIGRFAM: Glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; glycine oxidase ThiO complement(198359..199486) Nitrosomonas sp. Is79A3 10932241 YP_004693475.1 CDS Nit79A3_0169 NC_015731.1 199750 200274 D KEGG: nit:NAL212_2900 general secretion pathway, GspH; general secretion pathway, GspH 199750..200274 Nitrosomonas sp. Is79A3 10932242 YP_004693476.1 CDS Nit79A3_0170 NC_015731.1 200268 200780 D TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG: nit:NAL212_2899 type IV pilus modification protein PilV; type IV pilus modification protein PilV 200268..200780 Nitrosomonas sp. Is79A3 10932243 YP_004693477.1 CDS Nit79A3_0171 NC_015731.1 200817 201575 D KEGG: nit:NAL212_2898 Tfp pilus assembly protein PilW; Tfp pilus assembly protein PilW 200817..201575 Nitrosomonas sp. Is79A3 10932244 YP_004693478.1 CDS Nit79A3_0172 NC_015731.1 201572 202141 D KEGG: nit:NAL212_2897 hypothetical protein; hypothetical protein 201572..202141 Nitrosomonas sp. Is79A3 10932245 YP_004693479.1 CDS Nit79A3_0173 NC_015731.1 202176 205688 D PFAM: Neisseria PilC; KEGG: nit:NAL212_2896 PilC domain-containing protein; Neisseria PilC domain-containing protein 202176..205688 Nitrosomonas sp. Is79A3 10932246 YP_004693480.1 CDS Nit79A3_0174 NC_015731.1 205795 206253 D KEGG: nit:NAL212_2895 fimbrial protein pilin; fimbrial protein pilin 205795..206253 Nitrosomonas sp. Is79A3 10932247 YP_004693481.1 CDS Nit79A3_0175 NC_015731.1 206288 206995 R KEGG: nit:NAL212_0182 phosphate uptake regulator, PhoU; TIGRFAM: PhoU; PFAM: PhoU; phosphate uptake regulator PhoU complement(206288..206995) Nitrosomonas sp. Is79A3 10932248 YP_004693482.1 CDS Nit79A3_0176 NC_015731.1 207067 207726 R TIGRFAM: Ribose 5-phosphate isomerase; HAMAP: Ribose-5-phosphate isomerase, subgroup; KEGG: nit:NAL212_0183 ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; Ribose-5-phosphate isomerase A complement(207067..207726) Nitrosomonas sp. Is79A3 10932249 YP_004693483.1 CDS Nit79A3_0177 NC_015731.1 208055 209359 D PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 208055..209359 Nitrosomonas sp. Is79A3 10932250 YP_004693484.1 CDS Nit79A3_0178 NC_015731.1 209532 210644 R KEGG: rpf:Rpic12D_1515 heat shock protein DnaJ domain-containing protein; molecular chaperone DnaJ complement(209532..210644) Nitrosomonas sp. Is79A3 10932251 YP_004693485.1 CDS Nit79A3_0179 NC_015731.1 210854 211219 R PFAM: Protein of unknown function DUF1486; KEGG: nit:NAL212_0470 hypothetical protein; hypothetical protein complement(210854..211219) Nitrosomonas sp. Is79A3 10932252 YP_004693486.1 CDS Nit79A3_0180 NC_015731.1 211262 212044 R KEGG: nit:NAL212_0471 hypothetical protein; HAMAP: UPF0246 protein yaaA; PFAM: Protein of unknown function DUF328; hypothetical protein complement(211262..212044) Nitrosomonas sp. Is79A3 10932253 YP_004693487.1 CDS Nit79A3_0181 NC_015731.1 212187 213353 D PFAM: Transposase, IS4-like; KEGG: cph:Cpha266_2339 transposase, IS4 family protein; transposase IS4 family protein 212187..213353 Nitrosomonas sp. Is79A3 10932254 YP_004693488.1 CDS Nit79A3_0182 NC_015731.1 213670 215160 D TIGRFAM: Peptidase S1C, Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; KEGG: nhl:Nhal_1160 protease Do; SMART: PDZ/DHR/GLGF; protease Do 213670..215160 Nitrosomonas sp. Is79A3 10932255 YP_004693489.1 CDS Nit79A3_0183 NC_015731.1 215376 216551 D KEGG: nit:NAL212_0594 amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; amidohydrolase 215376..216551 Nitrosomonas sp. Is79A3 10932256 YP_004693490.1 CDS Nit79A3_0184 NC_015731.1 216701 216949 D TIGRFAM: Prevent-host-death protein; KEGG: nit:NAL212_0596 prevent-host-death family protein; prevent-host-death family protein 216701..216949 Nitrosomonas sp. Is79A3 10932257 YP_004693491.1 CDS Nit79A3_0185 NC_015731.1 216939 217235 D KEGG: neu:NE1584 hypothetical protein; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system; RelE/StbE family addiction module toxin 216939..217235 Nitrosomonas sp. Is79A3 10932258 YP_004693492.1 CDS Nit79A3_0186 NC_015731.1 217434 217679 R KEGG: ava:Ava_0768 hypothetical protein; hypothetical protein complement(217434..217679) Nitrosomonas sp. Is79A3 10932259 YP_004693493.1 CDS Nit79A3_0187 NC_015731.1 217666 217938 R PFAM: Protein of unknown function DUF497; KEGG: cyc:PCC7424_5048 protein of unknown function DUF497; hypothetical protein complement(217666..217938) Nitrosomonas sp. Is79A3 10932260 YP_004693494.1 CDS Nit79A3_0188 NC_015731.1 217998 218120 R hypothetical protein complement(217998..218120) Nitrosomonas sp. Is79A3 10932261 YP_004693495.1 CDS Nit79A3_0189 NC_015731.1 218120 218314 R PFAM: Protein of unknown function DUF2191; KEGG: nhl:Nhal_3638 hypothetical protein; hypothetical protein complement(218120..218314) Nitrosomonas sp. Is79A3 10932262 YP_004693496.1 CDS Nit79A3_0190 NC_015731.1 218524 219729 R KEGG: ccs:CCNA_01861 hypothetical protein; hypothetical protein complement(218524..219729) Nitrosomonas sp. Is79A3 10932263 YP_004693497.1 CDS Nit79A3_0191 NC_015731.1 219829 223290 R TIGRFAM: Transcription-repair coupling factor; PFAM: Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Transcription-repair-coupling factor; KEGG: nit:NAL212_0605 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; transcription-repair coupling factor complement(219829..223290) Nitrosomonas sp. Is79A3 10932264 YP_004693498.1 CDS Nit79A3_0192 NC_015731.1 223559 224392 D KEGG: nit:NAL212_0606 hypothetical protein; hypothetical protein 223559..224392 Nitrosomonas sp. Is79A3 10932265 YP_004693499.1 CDS Nit79A3_0193 NC_015731.1 224513 225112 D PFAM: Phosphoglycerate mutase; KEGG: nit:NAL212_0607 phosphoglycerate mutase; Phosphoglycerate mutase 224513..225112 Nitrosomonas sp. Is79A3 10932266 YP_004693500.1 CDS Nit79A3_0194 NC_015731.1 225303 225548 D TIGRFAM: Prevent-host-death protein; KEGG: gur:Gura_2397 prevent-host-death family protein; prevent-host-death family protein 225303..225548 Nitrosomonas sp. Is79A3 10932267 YP_004693501.1 CDS Nit79A3_0195 NC_015731.1 225532 225933 D PFAM: PilT protein, N-terminal; KEGG: gur:Gura_2398 PilT domain-containing protein; twitching motility protein PilT 225532..225933 Nitrosomonas sp. Is79A3 10932268 YP_004693502.1 CDS Nit79A3_0196 NC_015731.1 226033 227292 R PFAM: MgtC/SapB transporter; KEGG: nit:NAL212_0496 MgtC/SapB transporter; MgtC/SapB transporter complement(226033..227292) Nitrosomonas sp. Is79A3 10932269 YP_004693503.1 CDS Nit79A3_0197 NC_015731.1 227282 229060 R KEGG: nit:NAL212_0497 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: Bacterial RecJ exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; single-stranded-DNA-specific exonuclease RecJ complement(227282..229060) Nitrosomonas sp. Is79A3 10932270 YP_004693504.1 CDS Nit79A3_0198 NC_015731.1 229105 229953 R PFAM: Cystathionine beta-synthase, core; Transporter-associated region; KEGG: nit:NAL212_0498 transporter-associated region; CBS domain containing protein complement(229105..229953) Nitrosomonas sp. Is79A3 10932271 YP_004693505.1 CDS Nit79A3_0199 NC_015731.1 230040 230501 R TIGRFAM: Uncharacterised protein family UPF0054; HAMAP: Uncharacterised protein family UPF0054; KEGG: nit:NAL212_0499 hypothetical protein; PFAM: Uncharacterised protein family UPF0054; metalloprotease ybeY complement(230040..230501) Nitrosomonas sp. Is79A3 10932272 YP_004693506.1 CDS Nit79A3_0200 NC_015731.1 230514 231509 R PFAM: PhoH-like protein; KEGG: nit:NAL212_0500 PhoH family protein; PhoH family protein complement(230514..231509) Nitrosomonas sp. Is79A3 10932273 YP_004693507.1 CDS Nit79A3_0201 NC_015731.1 231585 232913 R KEGG: nit:NAL212_0501 (dimethylallyl)adenosine tRNA methylthiotransferase MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; manually curated; TIGRFAM: tRNA-i(6)A37 modification enzyme MiaB; Methylthiotransferase; SMART: Elongator protein 3/MiaB/NifB; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; (dimethylallyl)adenosine tRNA methylthiotransferase complement(231585..232913) Nitrosomonas sp. Is79A3 10932274 YP_004693508.1 CDS Nit79A3_0202 NC_015731.1 232932 233300 R KEGG: nit:NAL212_0502 hypothetical protein; hypothetical protein complement(232932..233300) Nitrosomonas sp. Is79A3 10932275 YP_004693509.1 CDS Nit79A3_0203 NC_015731.1 233652 236465 D KEGG: noc:Noc_1205 hypothetical protein; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SMART: DEAD-like helicase, N-terminal; type III restriction protein res subunit 233652..236465 Nitrosomonas sp. Is79A3 10932276 YP_004693510.1 CDS Nit79A3_0204 NC_015731.1 236465 238141 D PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: ipo:Ilyop_0907 restriction modification system DNA specificity domain protein; restriction modification system DNA specificity domain-containing protein 236465..238141 Nitrosomonas sp. Is79A3 10932277 YP_004693511.1 CDS Nit79A3_0205 NC_015731.1 238226 238867 D KEGG: app:CAP2UW1_4295 hypothetical protein; hypothetical protein 238226..238867 Nitrosomonas sp. Is79A3 10932278 YP_004693512.1 CDS Nit79A3_0206 NC_015731.1 238883 239941 D KEGG: app:CAP2UW1_4296 Appr-1-p processing domain-containing protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing; Appr-1-p processing domain-containing protein 238883..239941 Nitrosomonas sp. Is79A3 10932279 YP_004693513.1 CDS Nit79A3_0207 NC_015731.1 240256 241737 D PFAM: DNA methylase, adenine-specific; KEGG: noc:Noc_1201 N-6 DNA methylase; N-6 DNA methylase 240256..241737 Nitrosomonas sp. Is79A3 10932280 YP_004693514.1 CDS Nit79A3_0208 NC_015731.1 241883 242254 R hypothetical protein complement(241883..242254) Nitrosomonas sp. Is79A3 10932281 YP_004693515.1 CDS Nit79A3_0209 NC_015731.1 242573 243169 R TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; KEGG: nit:NAL212_3091 hypothetical protein; PEP motif anchor domain-containing protein complement(242573..243169) Nitrosomonas sp. Is79A3 10932282 YP_004693516.1 CDS Nit79A3_0210 NC_015731.1 243863 245032 D KEGG: nit:NAL212_0631 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: FAD dependent oxidoreductase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 243863..245032 Nitrosomonas sp. Is79A3 10932284 YP_004693517.1 CDS Nit79A3_0211 NC_015731.1 245059 245781 D PFAM: Disulphide bond isomerase, DsbC/G, N-terminal; KEGG: nit:NAL212_0630 disulfide bond isomerase, DsbC/G; Disulfide bond isomerase, DsbC/G 245059..245781 Nitrosomonas sp. Is79A3 10932285 YP_004693518.1 CDS Nit79A3_0212 NC_015731.1 245922 247556 D PFAM: Transposase, IS4-like; KEGG: afe:Lferr_1749 hypothetical protein; transposase IS4 family protein 245922..247556 Nitrosomonas sp. Is79A3 10932286 YP_004693519.1 CDS Nit79A3_0213 NC_015731.1 247572 248774 R PFAM: MltA; 3D; KEGG: nit:NAL212_0629 MltA domain-containing protein; MltA domain-containing protein complement(247572..248774) Nitrosomonas sp. Is79A3 10932287 YP_004693520.1 CDS Nit79A3_0214 NC_015731.1 249003 249749 R KEGG: nit:NAL212_0628 NGG1p interacting factor 3 protein, NIF3; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3; NGG1p interacting factor 3 protein, NIF3 complement(249003..249749) Nitrosomonas sp. Is79A3 10932288 YP_004693521.1 CDS Nit79A3_0215 NC_015731.1 249824 250966 D KEGG: nit:NAL212_0627 HtrA2 peptidase; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; peptidase S1 and S6 chymotrypsin/Hap 249824..250966 Nitrosomonas sp. Is79A3 10932289 YP_004693522.1 CDS Nit79A3_0216 NC_015731.1 251007 252659 D KEGG: nit:NAL212_0626 biopterin transport-like protein BT1; biopterin transport-like protein BT1 251007..252659 Nitrosomonas sp. Is79A3 10932290 YP_004693523.1 CDS Nit79A3_0217 NC_015731.1 252882 253169 D TIGRFAM: Competence protein ComEA, helix-hairpin-helix region; PFAM: Helix-hairpin-helix motif; KEGG: nit:NAL212_0625 competence protein ComEA helix-hairpin-helix repeat-containing protein; SMART: Helix-hairpin-helix DNA-binding motif, class 1; competence protein ComEA helix-hairpin-helix repeat protein 252882..253169 Nitrosomonas sp. Is79A3 10932291 YP_004693524.1 CDS Nit79A3_0218 NC_015731.1 253300 254187 D KEGG: nit:NAL212_0624 cysteine synthase; TIGRFAM: Cysteine synthase B; Cysteine synthase K/M; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; cysteine synthase B 253300..254187 Nitrosomonas sp. Is79A3 10932292 YP_004693525.1 CDS Nit79A3_0219 NC_015731.1 254496 254906 D KEGG: nit:NAL212_0623 tol-pal system-associated acyl-CoA thioesterase; TIGRFAM: Tol-Pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily; tol-pal system-associated acyl-CoA thioesterase 254496..254906 Nitrosomonas sp. Is79A3 10932293 YP_004693526.1 CDS Nit79A3_0220 NC_015731.1 254903 255583 D KEGG: nit:NAL212_0622 protein TolQ; TIGRFAM: Tol-Pal system, TolQ; PFAM: MotA/TolQ/ExbB proton channel; protein TolQ 254903..255583 Nitrosomonas sp. Is79A3 10932294 YP_004693527.1 CDS Nit79A3_0221 NC_015731.1 255603 256016 D KEGG: nit:NAL212_0621 protein TolR; TIGRFAM: Biopolymer transport, TolR; PFAM: Biopolymer transport protein ExbD/TolR; protein TolR 255603..256016 Nitrosomonas sp. Is79A3 10932295 YP_004693528.1 CDS Nit79A3_0222 NC_015731.1 256027 257067 D TIGRFAM: Tol-Pal system, TolA; KEGG: nit:NAL212_0620 protein TolA; protein TolA 256027..257067 Nitrosomonas sp. Is79A3 10932296 YP_004693529.1 CDS Nit79A3_0223 NC_015731.1 257064 258413 D TIGRFAM: Tol-Pal system beta propeller repeat-containing protein, TolB; HAMAP: Tol-Pal system beta propeller repeat-containing protein, TolB; KEGG: nit:NAL212_0619 Tol-Pal system beta propeller repeat-containing protein TolB; PFAM: TolB, N-terminal; WD40-like Beta Propeller; Protein tolB 257064..258413 Nitrosomonas sp. Is79A3 10932297 YP_004693530.1 CDS Nit79A3_0224 NC_015731.1 258443 258961 D KEGG: nit:NAL212_0618 peptidoglycan-associated lipoprotein; TIGRFAM: Peptidoglycan-associated lipoprotein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; peptidoglycan-associated lipoprotein 258443..258961 Nitrosomonas sp. Is79A3 10932298 YP_004693531.1 CDS Nit79A3_0225 NC_015731.1 258964 259869 D TIGRFAM: Tol-Pal system, YbgF; KEGG: nit:NAL212_0617 tol-pal system protein YbgF; tol-pal system protein YbgF 258964..259869 Nitrosomonas sp. Is79A3 10932299 YP_004693532.1 CDS Nit79A3_0226 NC_015731.1 259970 260626 D PFAM: Radical SAM; KEGG: nit:NAL212_0616 radical SAM domain-containing protein; Radical SAM domain-containing protein 259970..260626 Nitrosomonas sp. Is79A3 10932300 YP_004693533.1 CDS Nit79A3_0227 NC_015731.1 260644 261324 D KEGG: nit:NAL212_0615 ExsB protein; TIGRFAM: Exoenzyme S synthesis protein B/queuosine synthesis; PFAM: Queuosine synthesis-like; exoenzyme S synthesis protein B 260644..261324 Nitrosomonas sp. Is79A3 10932301 YP_004693534.1 CDS Nit79A3_0228 NC_015731.1 262073 262501 D KEGG: nit:NAL212_3147 ferric uptake regulator, Fur family; Fur family ferric uptake regulator 262073..262501 Nitrosomonas sp. Is79A3 10932302 YP_004693535.1 CDS Nit79A3_0229 NC_015731.1 262571 262894 D KEGG: nit:NAL212_3148 hypothetical protein; hypothetical protein 262571..262894 Nitrosomonas sp. Is79A3 10932303 YP_004693536.1 CDS Nit79A3_0230 NC_015731.1 263018 265069 D PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: nit:NAL212_3150 TonB-dependent receptor; TonB-dependent receptor 263018..265069 Nitrosomonas sp. Is79A3 10932304 YP_004693537.1 CDS Nit79A3_0231 NC_015731.1 265184 267445 D KEGG: nit:NAL212_2874 adenylate/guanylate cyclase with CHASE sensor; PFAM: CHASE2; Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; guanylate cyclase 265184..267445 Nitrosomonas sp. Is79A3 10932305 YP_004693538.1 CDS Nit79A3_0232 NC_015731.1 267763 271128 D PFAM: TonB-dependent receptor, beta-barrel; FecR protein; Tetratricopeptide TPR-1; KEGG: nit:NAL212_2875 FecR protein; TonB-dependent receptor 267763..271128 Nitrosomonas sp. Is79A3 10932306 YP_004693539.1 CDS Nit79A3_0233 NC_015731.1 271142 271468 D hypothetical protein 271142..271468 Nitrosomonas sp. Is79A3 10932307 YP_004693540.1 CDS Nit79A3_0234 NC_015731.1 271653 273710 R TIGRFAM: Inorganic H+ pyrophosphatase; HAMAP: Pyrophosphate-energized proton pump; KEGG: nit:NAL212_2938 V-type H(+)-translocating pyrophosphatase; PFAM: Inorganic H+ pyrophosphatase; Pyrophosphate-energized proton pump complement(271653..273710) Nitrosomonas sp. Is79A3 10932308 YP_004693541.1 CDS Nit79A3_0235 NC_015731.1 273944 275203 R PFAM: Phosphofructokinase; KEGG: nit:NAL212_2937 phosphofructokinase; phosphofructokinase complement(273944..275203) Nitrosomonas sp. Is79A3 10932309 YP_004693542.1 CDS Nit79A3_0236 NC_015731.1 275352 276011 R PFAM: Adenylate kinase; Adenylate kinase, zinc-finger lid region; manually curated; TIGRFAM: Adenylate kinase, subfamily; KEGG: nit:NAL212_2936 adenylate kinase; HAMAP: Adenylate kinase; adenylate kinase complement(275352..276011) Nitrosomonas sp. Is79A3 10932310 YP_004693543.1 CDS Nit79A3_0237 NC_015731.1 276222 277286 D SMART: ATPase, AAA+ type, core; TIGRFAM: DNA recombination and repair protein RecA; KEGG: nit:NAL212_2935 RecA protein; HAMAP: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA; recombinase A 276222..277286 Nitrosomonas sp. Is79A3 10932311 YP_004693544.1 CDS Nit79A3_0238 NC_015731.1 277292 277750 D KEGG: nit:NAL212_2934 regulatory protein RecX; HAMAP: Regulatory protein recX; PFAM: Regulatory protein RecX; Regulatory protein recX 277292..277750 Nitrosomonas sp. Is79A3 10932312 YP_004693545.1 CDS Nit79A3_0239 NC_015731.1 277747 278112 D KEGG: nit:NAL212_2933 hypothetical protein; hypothetical protein 277747..278112 Nitrosomonas sp. Is79A3 10932313 YP_004693546.1 CDS Nit79A3_0240 NC_015731.1 278109 280706 D KEGG: nit:NAL212_2932 alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1; alanyl-tRNA synthetase 278109..280706 Nitrosomonas sp. Is79A3 10932314 YP_004693547.1 CDS Nit79A3_0242 NC_015731.1 284700 285038 D PFAM: Polyketide cyclase/dehydrase; KEGG: mms:mma_1843 hypothetical protein; polyketide cyclase/dehydrase 284700..285038 Nitrosomonas sp. Is79A3 10932316 YP_004693548.1 CDS Nit79A3_0243 NC_015731.1 285481 286779 D PFAM: Integrase, catalytic core, phage; KEGG: nit:NAL212_3061 integrase; integrase 285481..286779 Nitrosomonas sp. Is79A3 10932317 YP_004693549.1 CDS Nit79A3_0244 NC_015731.1 286821 287147 D KEGG: slt:Slit_1766 addiction module killer protein; TIGRFAM: Addiction module killer protein, HI1419; PFAM: Protein of unknown function DUF891; addiction module killer protein 286821..287147 Nitrosomonas sp. Is79A3 10932318 YP_004693550.1 CDS Nit79A3_0245 NC_015731.1 287144 287446 D TIGRFAM: Addiction module antidote protein, HI1420; KEGG: dma:DMR_p1_00500 hypothetical protein; addiction module antidote protein 287144..287446 Nitrosomonas sp. Is79A3 10932319 YP_004693551.1 CDS Nit79A3_0246 NC_015731.1 287493 288179 D hypothetical protein 287493..288179 Nitrosomonas sp. Is79A3 10932320 YP_004693552.1 CDS Nit79A3_0247 NC_015731.1 288315 288539 D KEGG: tin:Tint_1141 hypothetical protein; hypothetical protein 288315..288539 Nitrosomonas sp. Is79A3 10932321 YP_004693553.1 CDS Nit79A3_0248 NC_015731.1 288539 289108 D KEGG: nit:NAL212_3065 hypothetical protein; hypothetical protein 288539..289108 Nitrosomonas sp. Is79A3 10932322 YP_004693554.1 CDS Nit79A3_0249 NC_015731.1 289182 289649 D KEGG: pth:PTH_2877 hypothetical protein; hypothetical protein 289182..289649 Nitrosomonas sp. Is79A3 10932323 YP_004693555.1 CDS Nit79A3_0250 NC_015731.1 289646 290629 D KEGG: wch:wcw_0673 hypothetical protein; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SMART: ATPase, AAA+ type, core; Sigma-70 region 4 type 2 289646..290629 Nitrosomonas sp. Is79A3 10932324 YP_004693556.1 CDS Nit79A3_0251 NC_015731.1 290626 291027 D hypothetical protein 290626..291027 Nitrosomonas sp. Is79A3 10932325 YP_004693557.1 CDS Nit79A3_0252 NC_015731.1 291182 291706 D KEGG: nit:NAL212_1959 hypothetical protein; hypothetical protein 291182..291706 Nitrosomonas sp. Is79A3 10932326 YP_004693558.1 CDS Nit79A3_0253 NC_015731.1 291820 292017 D KEGG: nit:NAL212_3072 hypothetical protein; hypothetical protein 291820..292017 Nitrosomonas sp. Is79A3 10932327 YP_004693559.1 CDS Nit79A3_0254 NC_015731.1 292078 292686 R KEGG: msl:Msil_3100 protein of unknown function DUF955; hypothetical protein complement(292078..292686) Nitrosomonas sp. Is79A3 10932328 YP_004693560.1 CDS Nit79A3_0255 NC_015731.1 292723 292941 R hypothetical protein complement(292723..292941) Nitrosomonas sp. Is79A3 10932329 YP_004693561.1 CDS Nit79A3_0256 NC_015731.1 293504 295744 R KEGG: nit:NAL212_3075 RNA polymerase, sigma 70 subunit, RpoD; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, non-essential region; RNA polymerase sigma factor 70, region 1.1; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4; RNA polymerase, sigma 70 subunit, RpoD complement(293504..295744) Nitrosomonas sp. Is79A3 10932331 YP_004693562.1 CDS Nit79A3_0257 NC_015731.1 295833 297632 R KEGG: nit:NAL212_3076 DNA primase; TIGRFAM: DNA primase, DnaG; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; DNA primase, DnaB-helicase binding domain; DNA primase DnaG, DnaB-binding; DNA primase complement(295833..297632) Nitrosomonas sp. Is79A3 10932332 YP_004693563.1 CDS Nit79A3_0258 NC_015731.1 297731 298177 R KEGG: nit:NAL212_3077 hypothetical protein; hypothetical protein complement(297731..298177) Nitrosomonas sp. Is79A3 10932333 YP_004693564.1 CDS Nit79A3_0259 NC_015731.1 298277 298489 R TIGRFAM: Ribosomal protein S21; HAMAP: Ribosomal protein S21; KEGG: nit:NAL212_3078 30S ribosomal protein S21; PFAM: Ribosomal protein S21; 30S ribosomal protein S21 complement(298277..298489) Nitrosomonas sp. Is79A3 10932334 YP_004693565.1 CDS Nit79A3_0260 NC_015731.1 299629 299922 D PFAM: Transposase IS3/IS911; KEGG: gca:Galf_0832 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 299629..299922 Nitrosomonas sp. Is79A3 10932335 YP_004693566.1 CDS Nit79A3_0261 NC_015731.1 299919 300794 D PFAM: Integrase, catalytic core; KEGG: rso:RSp0548 ISRSO8-transposase orfB protein; Integrase catalytic subunit 299919..300794 Nitrosomonas sp. Is79A3 10932336 YP_004693567.1 CDS Nit79A3_0262 NC_015731.1 301052 301651 D KEGG: lch:Lcho_2324 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 301052..301651 Nitrosomonas sp. Is79A3 10932337 YP_004693568.1 CDS Nit79A3_0263 NC_015731.1 302183 303424 D PFAM: Integrase, catalytic core, phage; KEGG: nit:NAL212_2454 integrase; integrase 302183..303424 Nitrosomonas sp. Is79A3 10932338 YP_004693569.1 CDS Nit79A3_0265 NC_015731.1 303765 304073 D KEGG: nit:NAL212_2452 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 303765..304073 Nitrosomonas sp. Is79A3 10932340 YP_004693570.1 CDS Nit79A3_0266 NC_015731.1 304213 304572 D KEGG: nit:NAL212_0371 hypothetical protein; hypothetical protein 304213..304572 Nitrosomonas sp. Is79A3 10932341 YP_004693571.1 CDS Nit79A3_0267 NC_015731.1 304815 305693 R PFAM: Integrase, catalytic core; KEGG: rso:RSp0548 ISRSO8-transposase orfB protein; Integrase catalytic subunit complement(304815..305693) Nitrosomonas sp. Is79A3 10932342 YP_004693572.1 CDS Nit79A3_0268 NC_015731.1 305690 305983 R PFAM: Transposase IS3/IS911; KEGG: gca:Galf_0832 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(305690..305983) Nitrosomonas sp. Is79A3 10932343 YP_004693573.1 CDS Nit79A3_0269 NC_015731.1 306179 306640 R KEGG: nmu:Nmul_A1577 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02284; PFAM: Protein of unknown function DUF2383; hypothetical protein complement(306179..306640) Nitrosomonas sp. Is79A3 10932344 YP_004693574.1 CDS Nit79A3_0270 NC_015731.1 306852 307049 D hypothetical protein 306852..307049 Nitrosomonas sp. Is79A3 10932345 YP_004693575.1 CDS Nit79A3_0272 NC_015731.1 307742 308065 R PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein complement(307742..308065) Nitrosomonas sp. Is79A3 10932347 YP_004693576.1 CDS Nit79A3_0274 NC_015731.1 308583 308903 R PFAM: Plasmid stabilisation system; KEGG: nit:NAL212_3030 plasmid stabilization system; plasmid stabilization system complement(308583..308903) Nitrosomonas sp. Is79A3 10932349 YP_004693577.1 CDS Nit79A3_0275 NC_015731.1 308903 309163 R KEGG: nit:NAL212_3029 addiction module antidote protein, CC2985 family; TIGRFAM: addiction module antidote protein, CC2985; PFAM: addiction module antidote protein, CC2985; addiction module antidote protein complement(308903..309163) Nitrosomonas sp. Is79A3 10932350 YP_004693578.1 CDS Nit79A3_0277 NC_015731.1 310213 310740 D KEGG: nmu:Nmul_A1247 hypothetical protein; hypothetical protein 310213..310740 Nitrosomonas sp. Is79A3 10932352 YP_004693579.1 CDS Nit79A3_0281 NC_015731.1 312696 312938 R hypothetical protein complement(312696..312938) Nitrosomonas sp. Is79A3 10932356 YP_004693580.1 CDS Nit79A3_0284 NC_015731.1 314639 314737 D hypothetical protein 314639..314737 Nitrosomonas sp. Is79A3 10932359 YP_004693581.1 CDS Nit79A3_0285 NC_015731.1 314805 315242 R KEGG: hil:HICON_17510 hypothetical protein; hypothetical protein complement(314805..315242) Nitrosomonas sp. Is79A3 10932360 YP_004693582.1 CDS Nit79A3_0286 NC_015731.1 315414 316016 R PFAM: Sel1-like; KEGG: gur:Gura_1985 Sel1 domain-containing protein; Sel1 domain-containing protein complement(315414..316016) Nitrosomonas sp. Is79A3 10932361 YP_004693583.1 CDS Nit79A3_0287 NC_015731.1 316036 316359 D PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein 316036..316359 Nitrosomonas sp. Is79A3 10932362 YP_004693584.1 CDS Nit79A3_0288 NC_015731.1 316356 317264 D KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 316356..317264 Nitrosomonas sp. Is79A3 10932363 YP_004693585.1 CDS Nit79A3_0289 NC_015731.1 317232 317564 R KEGG: hiq:CGSHiGG_00130 Sel1 domain-containing protein; PFAM: Sel1-like; SMART: Sel1-like; Sel1 domain-containing protein complement(317232..317564) Nitrosomonas sp. Is79A3 10932364 YP_004693586.1 CDS Nit79A3_0290 NC_015731.1 317904 318104 R PFAM: Protein of unknown function DUF466; KEGG: nit:NAL212_0284 hypothetical protein; hypothetical protein complement(317904..318104) Nitrosomonas sp. Is79A3 10932365 YP_004693587.1 CDS Nit79A3_0291 NC_015731.1 318153 320192 R PFAM: Carbon starvation protein CstA; KEGG: nit:NAL212_0285 carbon starvation protein CstA; carbon starvation protein CstA complement(318153..320192) Nitrosomonas sp. Is79A3 10932366 YP_004693588.1 CDS Nit79A3_0292 NC_015731.1 320185 320340 R hypothetical protein complement(320185..320340) Nitrosomonas sp. Is79A3 10932367 YP_004693589.1 CDS Nit79A3_0293 NC_015731.1 320474 320902 R KEGG: lipoprotein; lipoprotein complement(320474..320902) Nitrosomonas sp. Is79A3 10932368 YP_004693590.1 CDS Nit79A3_0294 NC_015731.1 321070 321819 R KEGG: hch:HCH_00819 hypothetical protein; hypothetical protein complement(321070..321819) Nitrosomonas sp. Is79A3 10932369 YP_004693591.1 CDS Nit79A3_0295 NC_015731.1 322371 323990 D KEGG: prw:PsycPRwf_0663 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 322371..323990 Nitrosomonas sp. Is79A3 10932370 YP_004693592.1 CDS Nit79A3_0296 NC_015731.1 324097 325389 D PFAM: Cache, type 2; ATP-binding region, ATPase-like; KEGG: rpi:Rpic_3728 integral membrane sensor signal transduction histidine kinase; cache sensor protein 324097..325389 Nitrosomonas sp. Is79A3 10932371 YP_004693593.1 CDS Nit79A3_0297 NC_015731.1 325368 326300 D KEGG: rxy:Rxyl_0160 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; LuxR family transcriptional regulator 325368..326300 Nitrosomonas sp. Is79A3 10932372 YP_004693594.1 CDS Nit79A3_0298 NC_015731.1 326552 327730 D KEGG: gvi:gll2699 hypothetical protein; hypothetical protein 326552..327730 Nitrosomonas sp. Is79A3 10932373 YP_004693595.1 CDS Nit79A3_0299 NC_015731.1 327900 328955 D KEGG: sin:YN1551_1251 glyceraldehyde-3-phosphate dehydrogenase; hypothetical protein 327900..328955 Nitrosomonas sp. Is79A3 10932374 YP_004693596.1 CDS Nit79A3_0301 NC_015731.1 329822 330862 D PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; KEGG: gca:Galf_0971 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 329822..330862 Nitrosomonas sp. Is79A3 10932376 YP_004693597.1 CDS Nit79A3_0303 NC_015731.1 331719 332681 D PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 331719..332681 Nitrosomonas sp. Is79A3 10932378 YP_004693598.1 CDS Nit79A3_0304 NC_015731.1 333934 334755 D KEGG: nit:NAL212_2598 IstB domain-containing protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 333934..334755 Nitrosomonas sp. Is79A3 10932379 YP_004693599.1 CDS Nit79A3_0306 NC_015731.1 336196 336492 R PFAM: Transposase IS3/IS911; KEGG: net:Neut_2194 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(336196..336492) Nitrosomonas sp. Is79A3 10932381 YP_004693600.1 CDS Nit79A3_0307 NC_015731.1 337077 337463 D KEGG: dba:Dbac_1517 lipoprotein; lipoprotein 337077..337463 Nitrosomonas sp. Is79A3 10932382 YP_004693601.1 CDS Nit79A3_0308 NC_015731.1 337675 338346 D hypothetical protein 337675..338346 Nitrosomonas sp. Is79A3 10932383 YP_004693602.1 CDS Nit79A3_0309 NC_015731.1 338397 338591 D hypothetical protein 338397..338591 Nitrosomonas sp. Is79A3 10932384 YP_004693603.1 CDS Nit79A3_0311 NC_015731.1 339011 340813 R PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; KEGG: cbe:Cbei_3785 two component LuxR family transcriptional regulator; LuxR family transcriptional regulator complement(339011..340813) Nitrosomonas sp. Is79A3 10932386 YP_004693604.1 CDS Nit79A3_0312 NC_015731.1 340834 342102 R PFAM: ATP-binding region, ATPase-like; Cache, type 2; KEGG: nwa:Nwat_1013 integral membrane sensor signal transduction histidine kinase; cache sensor protein complement(340834..342102) Nitrosomonas sp. Is79A3 10932387 YP_004693605.1 CDS Nit79A3_0313 NC_015731.1 342532 343875 R PFAM: Sodium:dicarboxylate symporter; KEGG: vpe:Varpa_1261 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter complement(342532..343875) Nitrosomonas sp. Is79A3 10932388 YP_004693606.1 CDS Nit79A3_0316 NC_015731.1 345181 345813 R PFAM: Phosphoadenosine phosphosulphate reductase; KEGG: ote:Oter_2431 phosphoadenylyl-sulfate reductase (thioredoxin); phosphoadenosine phosphosulfate reductase complement(345181..345813) Nitrosomonas sp. Is79A3 10932391 YP_004693607.1 CDS Nit79A3_0317 NC_015731.1 346003 346605 D PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal; KEGG: nmu:Nmul_A2387 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 346003..346605 Nitrosomonas sp. Is79A3 10932392 YP_004693608.1 CDS Nit79A3_0319 NC_015731.1 346942 347316 D PFAM: thiol-disulphide oxidoreductase DCC; KEGG: nit:NAL212_1192 thiol-disulfide oxidoreductase DCC; thiol-disulfide oxidoreductase 346942..347316 Nitrosomonas sp. Is79A3 10932394 YP_004693609.1 CDS Nit79A3_0320 NC_015731.1 347317 347424 D hypothetical protein 347317..347424 Nitrosomonas sp. Is79A3 10932395 YP_004693610.1 CDS Nit79A3_0321 NC_015731.1 347859 349130 R KEGG: dar:Daro_1641 hypothetical protein; hypothetical protein complement(347859..349130) Nitrosomonas sp. Is79A3 10932396 YP_004693611.1 CDS Nit79A3_0322 NC_015731.1 349600 349869 R PFAM: Prophage CP4-57 regulatory; KEGG: shm:Shewmr7_1765 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA complement(349600..349869) Nitrosomonas sp. Is79A3 10932397 YP_004693612.1 CDS Nit79A3_0323 NC_015731.1 350710 351618 R KEGG: hypothetical protein; hypothetical protein complement(350710..351618) Nitrosomonas sp. Is79A3 10932398 YP_004693613.1 CDS Nit79A3_0324 NC_015731.1 351684 352691 R KEGG: phage-type endonuclease; TIGRFAM: phage-type endonuclease; PFAM: YqaJ viral recombinase; phage-type endonuclease complement(351684..352691) Nitrosomonas sp. Is79A3 10932399 YP_004693614.1 CDS Nit79A3_0325 NC_015731.1 352803 353771 R TIGRFAM: Conserved hypothetical protein CHP03299, phage/plasmid-related; KEGG: phage/plasmid-like protein; phage/plasmid-like protein complement(352803..353771) Nitrosomonas sp. Is79A3 10932400 YP_004693615.1 CDS Nit79A3_0326 NC_015731.1 353919 354245 R KEGG: alv:Alvin_3273 hypothetical protein; hypothetical protein complement(353919..354245) Nitrosomonas sp. Is79A3 10932401 YP_004693616.1 CDS Nit79A3_0327 NC_015731.1 354857 358102 D KEGG: dde:Dde_1748 DEAD/DEAH box helicase-like; PFAM: DNA/RNA helicase, C-terminal; SNF2-related; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; helicase 354857..358102 Nitrosomonas sp. Is79A3 10932402 YP_004693617.1 CDS Nit79A3_0328 NC_015731.1 358095 358895 D KEGG: dde:Dde_1747 hypothetical protein; hypothetical protein 358095..358895 Nitrosomonas sp. Is79A3 10932403 YP_004693618.1 CDS Nit79A3_0329 NC_015731.1 358919 360970 D PFAM: DNA methylase N-4/N-6; KEGG: noc:Noc_2928 site-specific DNA-methyltransferase (adenine-specific); DNA methylase N-4/N-6 domain-containing protein 358919..360970 Nitrosomonas sp. Is79A3 10932404 YP_004693619.1 CDS Nit79A3_0330 NC_015731.1 360983 362668 D PFAM: Protein of unknown function DUF262; Protein of unknown function DUF1524 RloF; KEGG: shn:Shewana3_1820 hypothetical protein; hypothetical protein 360983..362668 Nitrosomonas sp. Is79A3 10932405 YP_004693620.1 CDS Nit79A3_0331 NC_015731.1 362676 365732 D PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: noc:Noc_2927 type III restriction enzyme, res subunit; type III restriction protein res subunit 362676..365732 Nitrosomonas sp. Is79A3 10932406 YP_004693621.1 CDS Nit79A3_0332 NC_015731.1 365747 365866 D hypothetical protein 365747..365866 Nitrosomonas sp. Is79A3 10932407 YP_004693622.1 CDS Nit79A3_0333 NC_015731.1 366049 366264 R hypothetical protein complement(366049..366264) Nitrosomonas sp. Is79A3 10932408 YP_004693623.1 CDS Nit79A3_0334 NC_015731.1 366346 367053 R PFAM: Pirin, N-terminal; KEGG: din:Selin_0368 pirin domain-containing protein; pirin complement(366346..367053) Nitrosomonas sp. Is79A3 10932409 YP_004693624.1 CDS Nit79A3_0335 NC_015731.1 367607 368773 D PFAM: Transposase, IS4-like; KEGG: dar:Daro_2223 transposase IS4; transposase IS4 family protein 367607..368773 Nitrosomonas sp. Is79A3 10932410 YP_004693625.1 CDS Nit79A3_0338 NC_015731.1 369914 371218 R PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein complement(369914..371218) Nitrosomonas sp. Is79A3 10932413 YP_004693626.1 CDS Nit79A3_0339 NC_015731.1 371421 371684 D KEGG: nit:NAL212_0061 hypothetical protein; hypothetical protein 371421..371684 Nitrosomonas sp. Is79A3 10932414 YP_004693627.1 CDS Nit79A3_0340 NC_015731.1 371978 372583 D PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: nit:NAL212_2526 peptidase S24/S26A/S26B, conserved region; peptidase S24/S26A/S26B 371978..372583 Nitrosomonas sp. Is79A3 10932415 YP_004693628.1 CDS Nit79A3_0341 NC_015731.1 372580 373971 D TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; KEGG: nit:NAL212_2527 DNA polymerase III, epsilon subunit; SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; DNA polymerase III subunit epsilon 372580..373971 Nitrosomonas sp. Is79A3 10932416 YP_004693629.1 CDS Nit79A3_0342 NC_015731.1 373964 375256 D PFAM: DNA-repair protein, UmuC-like; KEGG: nit:NAL212_2528 DNA-directed DNA polymerase; UMUC domain-containing protein DNA-repair protein 373964..375256 Nitrosomonas sp. Is79A3 10932417 YP_004693630.1 CDS Nit79A3_0343 NC_015731.1 375302 375802 R KEGG: pat:Patl_3400 ribonuclease H; ribonuclease H complement(375302..375802) Nitrosomonas sp. Is79A3 10932418 YP_004693631.1 CDS Nit79A3_0344 NC_015731.1 376438 376989 R KEGG: gem:GM21_0307 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(376438..376989) Nitrosomonas sp. Is79A3 10932419 YP_004693632.1 CDS Nit79A3_0345 NC_015731.1 377572 378789 R PFAM: Integrase, catalytic core, phage; KEGG: nmu:Nmul_A0922 phage integrase; integrase complement(377572..378789) Nitrosomonas sp. Is79A3 10932420 YP_004693633.1 CDS Nit79A3_0346 NC_015731.1 379089 379934 R KEGG: nit:NAL212_3020 RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma factor RpoH, proteobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; RNA polymerase, sigma 32 subunit, RpoH complement(379089..379934) Nitrosomonas sp. Is79A3 10932422 YP_004693634.1 CDS Nit79A3_0347 NC_015731.1 380047 380958 R PFAM: Protein of unknown function DUF214, permase predicted; KEGG: nit:NAL212_3019 hypothetical protein; hypothetical protein complement(380047..380958) Nitrosomonas sp. Is79A3 10932423 YP_004693635.1 CDS Nit79A3_0348 NC_015731.1 380955 381608 R TIGRFAM: Cell division ATP-binding protein FtsE; PFAM: ABC transporter-like; KEGG: nit:NAL212_3018 cell division ATP-binding protein FtsE; SMART: ATPase, AAA+ type, core; cell division ATP-binding protein FtsE complement(380955..381608) Nitrosomonas sp. Is79A3 10932424 YP_004693636.1 CDS Nit79A3_0349 NC_015731.1 381633 382658 R TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: nit:NAL212_3017 signal recognition particle-docking protein FtsY; SMART: ATPase, AAA+ type, core; signal recognition particle-docking protein FtsY complement(381633..382658) Nitrosomonas sp. Is79A3 10932425 YP_004693637.1 CDS Nit79A3_0350 NC_015731.1 382735 384138 D PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: nit:NAL212_3016 processing peptidase; peptidase M16 domain-containing protein 382735..384138 Nitrosomonas sp. Is79A3 10932426 YP_004693638.1 CDS Nit79A3_0351 NC_015731.1 384234 384617 R KEGG: nit:NAL212_3015 calcium-binding EF-hand; PFAM: EF-Hand domain; SMART: Calcium-binding EF-hand; EF hand repeat-containing protein complement(384234..384617) Nitrosomonas sp. Is79A3 10932427 YP_004693639.1 CDS Nit79A3_0352 NC_015731.1 384755 385345 R HAMAP: Oligoribonuclease; PFAM: Exonuclease, RNase T/DNA polymerase III; KEGG: nit:NAL212_3014 exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; Oligoribonuclease complement(384755..385345) Nitrosomonas sp. Is79A3 10932428 YP_004693640.1 CDS Nit79A3_0353 NC_015731.1 385456 386712 D PFAM: Peptidase M48, Ste24p; KEGG: nit:NAL212_3013 STE24 endopeptidase; peptidase M48 Ste24p 385456..386712 Nitrosomonas sp. Is79A3 10932429 YP_004693641.1 CDS Nit79A3_0354 NC_015731.1 386709 387050 D KEGG: nit:NAL212_3012 transcriptional coactivator/pterin dehydratase; HAMAP: pterin-4-alpha-carbinolamine dehydratase; PFAM: Transcriptional coactivator/pterin dehydratase; pterin-4-alpha-carbinolamine dehydratase 386709..387050 Nitrosomonas sp. Is79A3 10932430 YP_004693642.1 CDS Nit79A3_0355 NC_015731.1 387047 387976 D TIGRFAM: GTPase EngC; HAMAP: ribosome biogenesis GTPase RsgA; KEGG: nit:NAL212_3011 ribosome biogenesis GTPase RsgA; PFAM: GTPase EngC; ribosome biogenesis GTPase RsgA 387047..387976 Nitrosomonas sp. Is79A3 10932431 YP_004693643.1 CDS Nit79A3_0356 NC_015731.1 388028 388402 R KEGG: nit:NAL212_0416 dihydroneopterin aldolase; TIGRFAM: Dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; dihydroneopterin aldolase complement(388028..388402) Nitrosomonas sp. Is79A3 10932432 YP_004693644.1 CDS Nit79A3_0357 NC_015731.1 388509 389123 D TIGRFAM: Membrane protein YgiH; HAMAP: Protein of unknown function DUF205; KEGG: nit:NAL212_0417 hypothetical protein; PFAM: Protein of unknown function DUF205; Glycerol-3-phosphate acyltransferase 388509..389123 Nitrosomonas sp. Is79A3 10932433 YP_004693645.1 CDS Nit79A3_0358 NC_015731.1 389124 390155 R TIGRFAM: glycoprotease GCP; Peptidase M22, glycoprotease, subgroup; HAMAP: O-sialoglycoprotein endopeptidase; KEGG: nit:NAL212_0418 metalloendopeptidase, glycoprotease; PFAM: Peptidase M22, glycoprotease; O-sialoglycoprotein endopeptidase complement(389124..390155) Nitrosomonas sp. Is79A3 10932434 YP_004693646.1 CDS Nit79A3_0359 NC_015731.1 390398 390586 D KEGG: nit:NAL212_3155 hypothetical protein; hypothetical protein 390398..390586 Nitrosomonas sp. Is79A3 10932435 YP_004693647.1 CDS Nit79A3_0360 NC_015731.1 390649 391149 D KEGG: nit:NAL212_3154 hypothetical protein; hypothetical protein 390649..391149 Nitrosomonas sp. Is79A3 10932436 YP_004693648.1 CDS Nit79A3_0361 NC_015731.1 391160 391996 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nit:NAL212_3153 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(391160..391996) Nitrosomonas sp. Is79A3 10932437 YP_004693649.1 CDS Nit79A3_0362 NC_015731.1 392136 392501 D KEGG: nit:NAL212_3152 hypothetical protein; hypothetical protein 392136..392501 Nitrosomonas sp. Is79A3 10932438 YP_004693650.1 CDS Nit79A3_0363 NC_015731.1 392596 393117 D KEGG: nit:NAL212_3151 hypothetical protein; hypothetical protein 392596..393117 Nitrosomonas sp. Is79A3 10932439 YP_004693651.1 CDS Nit79A3_0365 NC_015731.1 393830 395008 D TIGRFAM: Thiolase; KEGG: nit:NAL212_0503 acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 393830..395008 Nitrosomonas sp. Is79A3 10932441 YP_004693652.1 CDS Nit79A3_0366 NC_015731.1 395161 395535 D PFAM: ATPase, F0 complex, subunit I, proteobacteria-type; KEGG: nit:NAL212_0504 ATP synthase I chain; ATP synthase I chain 395161..395535 Nitrosomonas sp. Is79A3 10932442 YP_004693653.1 CDS Nit79A3_0367 NC_015731.1 395565 396374 D TIGRFAM: ATPase, F0 complex, subunit A; HAMAP: ATP synthase subunit a; KEGG: nit:NAL212_0505 ATP synthase F0, A subunit; PFAM: ATPase, F0 complex, subunit A; ATP synthase subunit a 395565..396374 Nitrosomonas sp. Is79A3 10932443 YP_004693654.1 CDS Nit79A3_0368 NC_015731.1 396431 396703 D TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: nit:NAL212_0506 ATP synthase F0, C subunit; PFAM: ATPase, F0/V0 complex, subunit C; ATP synthase subunit c 396431..396703 Nitrosomonas sp. Is79A3 10932444 YP_004693655.1 CDS Nit79A3_0369 NC_015731.1 396744 397217 D TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATP synthase subunit b; KEGG: nit:NAL212_0507 ATP synthase F0, B subunit; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; ATP synthase subunit b 396744..397217 Nitrosomonas sp. Is79A3 10932445 YP_004693656.1 CDS Nit79A3_0370 NC_015731.1 397217 397753 D TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; HAMAP: ATPase, F1 complex, OSCP/delta subunit; KEGG: nit:NAL212_0508 ATP synthase F1, delta subunit; PFAM: ATPase, F1 complex, OSCP/delta subunit; ATP synthase subunit delta 397217..397753 Nitrosomonas sp. Is79A3 10932446 YP_004693657.1 CDS Nit79A3_0371 NC_015731.1 397766 399307 D TIGRFAM: ATPase, F1 complex, alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; KEGG: nit:NAL212_0509 ATP synthase F1, alpha subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit alpha 397766..399307 Nitrosomonas sp. Is79A3 10932447 YP_004693658.1 CDS Nit79A3_0372 NC_015731.1 399311 400195 D TIGRFAM: ATPase, F1 complex, gamma subunit; HAMAP: ATP synthase gamma chain; KEGG: nit:NAL212_0510 ATP synthase F1, gamma subunit; PFAM: ATPase, F1 complex, gamma subunit; ATP synthase subunit gamma 399311..400195 Nitrosomonas sp. Is79A3 10932448 YP_004693659.1 CDS Nit79A3_0373 NC_015731.1 400227 401606 D SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, F1 complex, beta subunit; KEGG: nit:NAL212_0511 ATP synthase F1, beta subunit; HAMAP: ATPase, F1 complex, beta subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit beta 400227..401606 Nitrosomonas sp. Is79A3 10932449 YP_004693660.1 CDS Nit79A3_0374 NC_015731.1 401624 402046 D TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; HAMAP: ATPase, F1 complex, delta/epsilon subunit; KEGG: nit:NAL212_0512 ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; ATPase, F1 complex, delta/epsilon subunit, C-terminal; ATP synthase subunit epsilon 401624..402046 Nitrosomonas sp. Is79A3 10932450 YP_004693661.1 CDS Nit79A3_0375 NC_015731.1 402280 403653 D TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; KEGG: nit:NAL212_0513 bifunctional protein GlmU; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Bacterial transferase hexapeptide repeat; Bifunctional protein glmU 402280..403653 Nitrosomonas sp. Is79A3 10932451 YP_004693662.1 CDS Nit79A3_0376 NC_015731.1 403714 405570 D TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; HAMAP: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; KEGG: nit:NAL212_0514 glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: Sugar isomerase (SIS); Glutamine amidotransferase, class-II; Glucosamine--fructose-6-phosphate aminotransferase 403714..405570 Nitrosomonas sp. Is79A3 10932452 YP_004693663.1 CDS Nit79A3_0377 NC_015731.1 405714 406439 D TIGRFAM: Protein of unknown function DUF28; HAMAP: Protein of unknown function DUF28; KEGG: nit:NAL212_0515 hypothetical protein; PFAM: Protein of unknown function DUF28; hypothetical protein 405714..406439 Nitrosomonas sp. Is79A3 10932453 YP_004693664.1 CDS Nit79A3_0378 NC_015731.1 406448 406981 D TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; HAMAP: Crossover junction endodeoxyribonuclease RuvC; KEGG: nit:NAL212_0516 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; Crossover junction endodeoxyribonuclease ruvC 406448..406981 Nitrosomonas sp. Is79A3 10932454 YP_004693665.1 CDS Nit79A3_0379 NC_015731.1 406978 407562 D TIGRFAM: Bacterial DNA recombination protein RuvA; HAMAP: Holliday junction ATP-dependent DNA helicase ruvA; KEGG: nit:NAL212_0517 Holliday junction ATP-dependent DNA helicase RuvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal; Holliday junction ATP-dependent DNA helicase ruvA 406978..407562 Nitrosomonas sp. Is79A3 10932455 YP_004693666.1 CDS Nit79A3_0380 NC_015731.1 407589 408635 D SMART: ATPase, AAA+ type, core; TIGRFAM: DNA helicase, Holliday junction RuvB type; KEGG: nit:NAL212_0518 Holliday junction DNA helicase RuvB; HAMAP: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal; Holliday junction ATP-dependent DNA helicase ruvB 407589..408635 Nitrosomonas sp. Is79A3 10932456 YP_004693667.1 CDS Nit79A3_0381 NC_015731.1 408660 409100 D KEGG: nit:NAL212_0519 hypothetical protein; hypothetical protein 408660..409100 Nitrosomonas sp. Is79A3 10932457 YP_004693668.1 CDS Nit79A3_0382 NC_015731.1 409219 409890 D PFAM: Uncharacterised protein family UPF0005; KEGG: nit:NAL212_0520 hypothetical protein; hypothetical protein 409219..409890 Nitrosomonas sp. Is79A3 10932458 YP_004693669.1 CDS Nit79A3_0383 NC_015731.1 409994 410173 D KEGG: nit:NAL212_0521 hypothetical protein; hypothetical protein 409994..410173 Nitrosomonas sp. Is79A3 10932459 YP_004693670.1 CDS Nit79A3_0384 NC_015731.1 410797 411618 D KEGG: nit:NAL212_0523 cytochrome c oxidase, subunit II; TIGRFAM: Cytochrome c oxidase, subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal; Cytochrome C oxidase subunit II, transmembrane region; cytochrome c oxidase subunit II 410797..411618 Nitrosomonas sp. Is79A3 10932460 YP_004693671.1 CDS Nit79A3_0385 NC_015731.1 411631 413217 D KEGG: nit:NAL212_0524 cytochrome c oxidase, subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I 411631..413217 Nitrosomonas sp. Is79A3 10932461 YP_004693672.1 CDS Nit79A3_0386 NC_015731.1 413238 413348 D hypothetical protein 413238..413348 Nitrosomonas sp. Is79A3 10932462 YP_004693673.1 CDS Nit79A3_0387 NC_015731.1 413338 413865 D PFAM: Cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: nit:NAL212_0526 cytochrome c oxidase assembly protein CtaG/Cox11; cytochrome c oxidase assembly protein CtaG/Cox11 413338..413865 Nitrosomonas sp. Is79A3 10932463 YP_004693674.1 CDS Nit79A3_0388 NC_015731.1 413846 414103 D KEGG: nit:NAL212_0527 transmembrane protein; transmembrane protein 413846..414103 Nitrosomonas sp. Is79A3 10932464 YP_004693675.1 CDS Nit79A3_0389 NC_015731.1 414138 414995 D PFAM: Cytochrome c oxidase, subunit III; KEGG: nit:NAL212_0528 cytochrome-c oxidase; cytochrome c oxidase subunit III 414138..414995 Nitrosomonas sp. Is79A3 10932465 YP_004693676.1 CDS Nit79A3_0390 NC_015731.1 415218 415937 D KEGG: nit:NAL212_0529 surfeit locus 1 family protein; surfeit locus 1 family protein 415218..415937 Nitrosomonas sp. Is79A3 10932466 YP_004693677.1 CDS Nit79A3_0391 NC_015731.1 415909 416490 D KEGG: nit:NAL212_0530 transmembrane protein; transmembrane protein 415909..416490 Nitrosomonas sp. Is79A3 10932467 YP_004693678.1 CDS Nit79A3_0392 NC_015731.1 416575 417468 D TIGRFAM: Protohaem IX farnesyltransferase; HAMAP: Protohaem IX farnesyltransferase; KEGG: nit:NAL212_0531 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; protoheme IX farnesyltransferase 416575..417468 Nitrosomonas sp. Is79A3 10932468 YP_004693679.1 CDS Nit79A3_0393 NC_015731.1 417558 418931 R PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; KEGG: nit:NAL212_0532 D-lactate dehydrogenase (cytochrome); FAD linked oxidase domain-containing protein complement(417558..418931) Nitrosomonas sp. Is79A3 10932469 YP_004693680.1 CDS Nit79A3_0394 NC_015731.1 418936 419514 R PFAM: Transport-associated; KEGG: nit:NAL212_0533 transport-associated protein; transport-associated protein complement(418936..419514) Nitrosomonas sp. Is79A3 10932470 YP_004693681.1 CDS Nit79A3_0395 NC_015731.1 419628 420134 D KEGG: nit:NAL212_0534 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; chemotaxis protein CheW 419628..420134 Nitrosomonas sp. Is79A3 10932471 YP_004693682.1 CDS Nit79A3_0396 NC_015731.1 420202 421089 D KEGG: nit:NAL212_0535 acetylglutamate kinase; TIGRFAM: Acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; acetylglutamate kinase 420202..421089 Nitrosomonas sp. Is79A3 10932472 YP_004693683.1 CDS Nit79A3_0397 NC_015731.1 421213 421938 R KEGG: nit:NAL212_0536 RNA methyltransferase, TrmH family, group 1; TIGRFAM: RNA methyltransferase TrmH, group 1; PFAM: tRNA/rRNA methyltransferase, SpoU; TrmH family RNA methyltransferase complement(421213..421938) Nitrosomonas sp. Is79A3 10932473 YP_004693684.1 CDS Nit79A3_0398 NC_015731.1 422277 422855 D PFAM: Plasmid pRiA4b ORF-3-like; KEGG: nit:NAL212_0727 plasmid pRiA4b ORF-3 family protein; plasmid pRiA4b ORF-3 family protein 422277..422855 Nitrosomonas sp. Is79A3 10932474 YP_004693685.1 CDS Nit79A3_0400 NC_015731.1 423444 424610 D PFAM: Transposase, IS4-like; KEGG: dar:Daro_2223 transposase IS4; transposase IS4 family protein 423444..424610 Nitrosomonas sp. Is79A3 10932476 YP_004693686.1 CDS Nit79A3_0401 NC_015731.1 426127 427161 D KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase 426127..427161 Nitrosomonas sp. Is79A3 10932477 YP_004693687.1 CDS Nit79A3_0403 NC_015731.1 428631 429329 R KEGG: bgl:bglu_2g22620 response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator complement(428631..429329) Nitrosomonas sp. Is79A3 10932479 YP_004693688.1 CDS Nit79A3_0405 NC_015731.1 429892 430095 D KEGG: nit:NAL212_2701 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 429892..430095 Nitrosomonas sp. Is79A3 10932481 YP_004693689.1 CDS Nit79A3_0406 NC_015731.1 430150 430395 R hypothetical protein complement(430150..430395) Nitrosomonas sp. Is79A3 10932482 YP_004693690.1 CDS Nit79A3_0407 NC_015731.1 430586 431812 D TIGRFAM: Arginine biosynthesis protein ArgJ; HAMAP: Arginine biosynthesis protein ArgJ; KEGG: nit:NAL212_2703 arginine biosynthesis bifunctional protein ArgJ; PFAM: Arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ 430586..431812 Nitrosomonas sp. Is79A3 10932483 YP_004693691.1 CDS Nit79A3_0408 NC_015731.1 431824 432696 D KEGG: nit:NAL212_2704 hypothetical protein; PFAM: Protein of unknown function DUF815; SMART: ATPase, AAA+ type, core; hypothetical protein 431824..432696 Nitrosomonas sp. Is79A3 10932484 YP_004693692.1 CDS Nit79A3_0409 NC_015731.1 432705 433673 D PFAM: Thiamine monophosphate synthase; NUDIX hydrolase domain; KEGG: nit:NAL212_2705 thiamine monophosphate synthase; thiamine monophosphate synthase 432705..433673 Nitrosomonas sp. Is79A3 10932485 YP_004693693.1 CDS Nit79A3_0410 NC_015731.1 433711 434847 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: nit:NAL212_2706 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase complement(433711..434847) Nitrosomonas sp. Is79A3 10932486 YP_004693694.1 CDS Nit79A3_0411 NC_015731.1 434847 435035 R KEGG: nit:NAL212_2707 uncharacterized zinc-binding family protein; HAMAP: Uncharacterised protein family, zinc-binding; PFAM: Uncharacterised protein family, zinc-binding; hypothetical protein complement(434847..435035) Nitrosomonas sp. Is79A3 10932487 YP_004693695.1 CDS Nit79A3_0412 NC_015731.1 435294 435878 D KEGG: nit:NAL212_2708 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 435294..435878 Nitrosomonas sp. Is79A3 10932488 YP_004693696.1 CDS Nit79A3_0413 NC_015731.1 435875 436444 D KEGG: nit:NAL212_2709 hypothetical protein; hypothetical protein 435875..436444 Nitrosomonas sp. Is79A3 10932489 YP_004693697.1 CDS Nit79A3_0414 NC_015731.1 436798 439092 D KEGG: nit:NAL212_2711 xenobiotic-transporting ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; ABC transporter 436798..439092 Nitrosomonas sp. Is79A3 10932490 YP_004693698.1 CDS Nit79A3_0415 NC_015731.1 439089 439562 D PFAM: Domain of unknown function DUF1854; KEGG: nit:NAL212_2712 hypothetical protein; hypothetical protein 439089..439562 Nitrosomonas sp. Is79A3 10932491 YP_004693699.1 CDS Nit79A3_0416 NC_015731.1 439600 440955 R KEGG: nit:NAL212_2716 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related; manually curated; TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; SMART: Ras small GTPase, Ras type; HAMAP: tRNA modification GTPase TrmE; tRNA modification GTPase mnmE complement(439600..440955) Nitrosomonas sp. Is79A3 10932492 YP_004693700.1 CDS Nit79A3_0417 NC_015731.1 441026 442960 R TIGRFAM: Membrane insertion protein, OxoA/YidC, N-terminal; Membrane insertion protein, OxaA/YidC, core; HAMAP: Membrane protein oxaA; KEGG: nit:NAL212_2717 membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: Membrane insertion protein, OxaA/YidC; membrane protein OxaA complement(441026..442960) Nitrosomonas sp. Is79A3 10932493 YP_004693701.1 CDS Nit79A3_0418 NC_015731.1 443141 443350 R PFAM: Protein of unknown function DUF37; manually curated; TIGRFAM: Protein of unknown function DUF37; KEGG: nmu:Nmul_A2777 hypothetical protein; HAMAP: Protein of unknown function DUF37; hypothetical protein complement(443141..443350) Nitrosomonas sp. Is79A3 10932494 YP_004693702.1 CDS Nit79A3_0419 NC_015731.1 443338 443691 R PFAM: Ribonuclease P; manually curated; TIGRFAM: Ribonuclease P; KEGG: nit:NAL212_2718 ribonuclease P protein component; HAMAP: Ribonuclease P; Ribonuclease P protein component complement(443338..443691) Nitrosomonas sp. Is79A3 10932495 YP_004693703.1 CDS Nit79A3_0420 NC_015731.1 443731 443865 R TIGRFAM: Ribosomal protein L34; HAMAP: 50S ribosomal protein L34; KEGG: nit:NAL212_2719 50S ribosomal protein L34; PFAM: Ribosomal protein L34; 50S ribosomal protein L34 complement(443731..443865) Nitrosomonas sp. Is79A3 10932496 YP_004693704.1 CDS Nit79A3_0421 NC_015731.1 444281 444754 D KEGG: nit:NAL212_2099 hypothetical protein; hypothetical protein 444281..444754 Nitrosomonas sp. Is79A3 10932497 YP_004693705.1 CDS Nit79A3_0422 NC_015731.1 445207 445863 D hypothetical protein 445207..445863 Nitrosomonas sp. Is79A3 10932498 YP_004693706.1 CDS Nit79A3_0423 NC_015731.1 446065 447405 R KEGG: nit:NAL212_2100 type I secretion outer membrane protein, TolC family; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein; type I secretion outer membrane protein, TolC family complement(446065..447405) Nitrosomonas sp. Is79A3 10932499 YP_004693707.1 CDS Nit79A3_0424 NC_015731.1 447411 448763 R KEGG: nit:NAL212_2101 type I secretion membrane fusion protein, HlyD family; TIGRFAM: Type I secretion membrane fusion protein, HlyD; PFAM: Secretion protein HlyD; type I secretion membrane fusion protein, HlyD family complement(447411..448763) Nitrosomonas sp. Is79A3 10932500 YP_004693708.1 CDS Nit79A3_0425 NC_015731.1 448824 450614 R TIGRFAM: ATPase, type I secretion system, PrtD; PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: nit:NAL212_2102 type I secretion system ATPase; SMART: ATPase, AAA+ type, core; type I secretion system ATPase complement(448824..450614) Nitrosomonas sp. Is79A3 10932501 YP_004693709.1 CDS Nit79A3_0426 NC_015731.1 450693 451568 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: nit:NAL212_2103 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(450693..451568) Nitrosomonas sp. Is79A3 10932502 YP_004693710.1 CDS Nit79A3_0427 NC_015731.1 451561 452520 R PFAM: Glycosyl transferase, family 2; KEGG: nit:NAL212_2104 glycosyl transferase 2; glycosyl transferase 2 complement(451561..452520) Nitrosomonas sp. Is79A3 10932503 YP_004693711.1 CDS Nit79A3_0428 NC_015731.1 452489 453412 R KEGG: nwa:Nwat_0909 rhamnosyltransferase; TIGRFAM: Rhamnosyltransferase; PFAM: Glycosyl transferase, family 2; rhamnosyltransferase complement(452489..453412) Nitrosomonas sp. Is79A3 10932504 YP_004693712.1 CDS Nit79A3_0429 NC_015731.1 453592 453981 D hypothetical protein 453592..453981 Nitrosomonas sp. Is79A3 10932505 YP_004693713.1 CDS Nit79A3_0430 NC_015731.1 454582 458226 D PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; Glycosyl transferase, family 2; KEGG: avn:Avin_15980 glycosyl transferase, family 2; LmbE family protein 454582..458226 Nitrosomonas sp. Is79A3 10932506 YP_004693714.1 CDS Nit79A3_0431 NC_015731.1 458226 460064 D PFAM: Haloacid dehalogenase-like hydrolase; KEGG: avn:Avin_15990 hydrolase (HAD superfamily) protein; haloacid dehalogenase 458226..460064 Nitrosomonas sp. Is79A3 10932507 YP_004693715.1 CDS Nit79A3_0433 NC_015731.1 461019 462839 R PFAM: Methyltransferase type 11; KEGG: nit:NAL212_3005 hypothetical protein; type 11 methyltransferase complement(461019..462839) Nitrosomonas sp. Is79A3 10932509 YP_004693716.1 CDS Nit79A3_0434 NC_015731.1 462823 464109 R KEGG: nit:NAL212_3004 teichoic-acid-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter complement(462823..464109) Nitrosomonas sp. Is79A3 10932510 YP_004693717.1 CDS Nit79A3_0435 NC_015731.1 464099 464929 R KEGG: pol:Bpro_4002 hypothetical protein; manually curated; PFAM: ABC-2 type transporter; ABC transporter complement(464099..464929) Nitrosomonas sp. Is79A3 10932511 YP_004693718.1 CDS Nit79A3_0436 NC_015731.1 465549 467927 D PFAM: Haemolysin-type calcium-binding region; KEGG: nit:NAL212_3002 hypothetical protein; Hemolysin-type calcium-binding protein 465549..467927 Nitrosomonas sp. Is79A3 10932512 YP_004693719.1 CDS Nit79A3_0437 NC_015731.1 468174 469709 D PFAM: Methyltransferase regulatory domain, predicted; KEGG: rce:RC1_0828 hypothetical protein; Methyltransferase regulatory domain-containing protein 468174..469709 Nitrosomonas sp. Is79A3 10932513 YP_004693720.1 CDS Nit79A3_0438 NC_015731.1 469767 470465 R KEGG: nit:NAL212_3001 orotidine 5'-phosphate decarboxylase; TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 1, core; PFAM: Orotidine 5'-phosphate decarboxylase, core; orotidine 5'-phosphate decarboxylase complement(469767..470465) Nitrosomonas sp. Is79A3 10932514 YP_004693721.1 CDS Nit79A3_0439 NC_015731.1 470476 470685 R KEGG: nit:NAL212_3000 hypothetical protein; hypothetical protein complement(470476..470685) Nitrosomonas sp. Is79A3 10932515 YP_004693722.1 CDS Nit79A3_0440 NC_015731.1 470905 471201 R SMART: Histone-like bacterial DNA-binding protein; TIGRFAM: Integration host factor, beta subunit; KEGG: nit:NAL212_2999 integration host factor, beta subunit; HAMAP: Integration host factor, beta subunit; PFAM: Histone-like bacterial DNA-binding protein; Integration host factor subunit beta complement(470905..471201) Nitrosomonas sp. Is79A3 10932516 YP_004693723.1 CDS Nit79A3_0441 NC_015731.1 471211 472923 R KEGG: nit:NAL212_2998 30S ribosomal protein S1; TIGRFAM: Ribosomal S1 synthesis/modification protein; PFAM: Ribosomal protein S1, RNA binding domain; 30S ribosomal protein S1 complement(471211..472923) Nitrosomonas sp. Is79A3 10932517 YP_004693724.1 CDS Nit79A3_0442 NC_015731.1 473050 473739 R TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: nit:NAL212_2997 cytidylate kinase; PFAM: Cytidylate kinase region; Cytidylate kinase complement(473050..473739) Nitrosomonas sp. Is79A3 10932518 YP_004693725.1 CDS Nit79A3_0443 NC_015731.1 473760 475115 R TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; KEGG: nit:NAL212_2996 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; 3-phosphoshikimate 1-carboxyvinyltransferase complement(473760..475115) Nitrosomonas sp. Is79A3 10932519 YP_004693726.1 CDS Nit79A3_0444 NC_015731.1 475371 475619 D KEGG: nit:NAL212_2995 hypothetical protein; hypothetical protein 475371..475619 Nitrosomonas sp. Is79A3 10932520 YP_004693727.1 CDS Nit79A3_0445 NC_015731.1 475736 478246 R TIGRFAM: DNA topoisomerase III, bacterial-type; PFAM: DNA topoisomerase, type IA, central; Toprim domain; KEGG: nit:NAL212_2994 DNA topoisomerase III; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; DNA topoisomerase III complement(475736..478246) Nitrosomonas sp. Is79A3 10932521 YP_004693728.1 CDS Nit79A3_0446 NC_015731.1 478411 478911 R KEGG: nit:NAL212_2993 hypothetical protein; HAMAP: Protein smg; PFAM: Protein of unknown function DUF494; Protein smg complement(478411..478911) Nitrosomonas sp. Is79A3 10932522 YP_004693729.1 CDS Nit79A3_0447 NC_015731.1 478934 480034 R KEGG: nit:NAL212_2992 DNA protecting protein DprA; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A; DNA protecting protein DprA complement(478934..480034) Nitrosomonas sp. Is79A3 10932523 YP_004693730.1 CDS Nit79A3_0448 NC_015731.1 480053 481087 R KEGG: nit:NAL212_2991 peptidoglycan-binding lysin domain; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; peptidoglycan-binding lysin domain-containing protein complement(480053..481087) Nitrosomonas sp. Is79A3 10932524 YP_004693731.1 CDS Nit79A3_0449 NC_015731.1 481099 481698 D TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: nit:NAL212_2990 peptide deformylase; PFAM: Formylmethionine deformylase; peptide deformylase 481099..481698 Nitrosomonas sp. Is79A3 10932525 YP_004693732.1 CDS Nit79A3_0450 NC_015731.1 481823 482782 D TIGRFAM: Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; KEGG: nit:NAL212_2989 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; Methionyl-tRNA formyltransferase 481823..482782 Nitrosomonas sp. Is79A3 10932526 YP_004693733.1 CDS Nit79A3_0451 NC_015731.1 482775 484052 D KEGG: nit:NAL212_2988 sun protein; TIGRFAM: Fmu, rRNA SAM-dependent methyltransferase; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44; sun protein 482775..484052 Nitrosomonas sp. Is79A3 10932527 YP_004693734.1 CDS Nit79A3_0452 NC_015731.1 484060 484659 D KEGG: nit:NAL212_2987 hypothetical protein; hypothetical protein 484060..484659 Nitrosomonas sp. Is79A3 10932528 YP_004693735.1 CDS Nit79A3_0453 NC_015731.1 484659 486836 D KEGG: nit:NAL212_2986 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 484659..486836 Nitrosomonas sp. Is79A3 10932529 YP_004693736.1 CDS Nit79A3_0454 NC_015731.1 486985 488247 D KEGG: nit:NAL212_2985 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Signal transduction response regulator, receiver region; RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; Fis family transcriptional regulator 486985..488247 Nitrosomonas sp. Is79A3 10932530 YP_004693737.1 CDS Nit79A3_0455 NC_015731.1 488389 490404 D KEGG: nit:NAL212_0188 transketolase; TIGRFAM: Transketolase, bacterial-like; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; transketolase 488389..490404 Nitrosomonas sp. Is79A3 10932531 YP_004693738.1 CDS Nit79A3_0456 NC_015731.1 490484 491482 D KEGG: nit:NAL212_0187 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase, type I 490484..491482 Nitrosomonas sp. Is79A3 10932532 YP_004693739.1 CDS Nit79A3_0457 NC_015731.1 491619 492797 D KEGG: nit:NAL212_0186 phosphoglycerate kinase; HAMAP: Phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; Phosphoglycerate kinase 491619..492797 Nitrosomonas sp. Is79A3 10932533 YP_004693740.1 CDS Nit79A3_0458 NC_015731.1 492813 494264 D KEGG: nit:NAL212_0185 pyruvate kinase; TIGRFAM: Pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; pyruvate kinase 492813..494264 Nitrosomonas sp. Is79A3 10932534 YP_004693741.1 CDS Nit79A3_0459 NC_015731.1 494400 495464 D KEGG: nit:NAL212_0184 fructose-bisphosphate aldolase, class II, Calvin cycle subtype; TIGRFAM: Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Ketose-bisphosphate aldolase, class-II; PFAM: Ketose-bisphosphate aldolase, class-II; fructose-bisphosphate aldolase, class II, Calvin cycle subtype 494400..495464 Nitrosomonas sp. Is79A3 10932535 YP_004693742.1 CDS Nit79A3_0461 NC_015731.1 496298 496882 R KEGG: afe:Lferr_0145 transposase; hypothetical protein complement(496298..496882) Nitrosomonas sp. Is79A3 10932537 YP_004693743.1 CDS Nit79A3_0462 NC_015731.1 496855 497358 R KEGG: afe:Lferr_0146 hypothetical protein; hypothetical protein complement(496855..497358) Nitrosomonas sp. Is79A3 10932538 YP_004693744.1 CDS Nit79A3_0463 NC_015731.1 497514 497792 R KEGG: nit:NAL212_2620 Fe(II) trafficking protein YggX; HAMAP: Fe(II) trafficking protein YggX; PFAM: Fe(II) trafficking protein YggX; Fe(2+)-trafficking protein complement(497514..497792) Nitrosomonas sp. Is79A3 10932539 YP_004693745.1 CDS Nit79A3_0464 NC_015731.1 497902 499245 R KEGG: nit:NAL212_2619 amino-acid N-acetyltransferase; TIGRFAM: Amino-acid N-acetyltransferase (ArgA); PFAM: GCN5-related N-acetyltransferase; Aspartate/glutamate/uridylate kinase; amino-acid N-acetyltransferase complement(497902..499245) Nitrosomonas sp. Is79A3 10932540 YP_004693746.1 CDS Nit79A3_0465 NC_015731.1 499289 500035 R KEGG: nit:NAL212_2618 ribosomal RNA small subunit methyltransferase E; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: Ribosomal RNA small subunit methyltransferase E; Ribosomal RNA small subunit methyltransferase E complement(499289..500035) Nitrosomonas sp. Is79A3 10932541 YP_004693747.1 CDS Nit79A3_0466 NC_015731.1 500193 500750 D PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: nit:NAL212_2617 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 500193..500750 Nitrosomonas sp. Is79A3 10932542 YP_004693748.1 CDS Nit79A3_0467 NC_015731.1 500753 501541 D PFAM: Inositol monophosphatase; KEGG: nit:NAL212_2616 inositol monophosphatase; inositol monophosphatase 500753..501541 Nitrosomonas sp. Is79A3 10932543 YP_004693749.1 CDS Nit79A3_0468 NC_015731.1 501551 503002 D PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: nit:NAL212_2615 TrkA-N domain-containing protein; TrkA-N domain-containing protein 501551..503002 Nitrosomonas sp. Is79A3 10932544 YP_004693750.1 CDS Nit79A3_0469 NC_015731.1 503015 504472 D PFAM: Cation transporter; KEGG: nit:NAL212_2614 cation transporter; cation transporter 503015..504472 Nitrosomonas sp. Is79A3 10932545 YP_004693751.1 CDS Nit79A3_0470 NC_015731.1 504608 504994 D KEGG: nit:NAL212_2613 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 504608..504994 Nitrosomonas sp. Is79A3 10932546 YP_004693752.1 CDS Nit79A3_0471 NC_015731.1 505357 506166 D KEGG: nit:NAL212_2606 methane monooxygenase/ammonia monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; methane monooxygenase/ammonia monooxygenase subunit C 505357..506166 Nitrosomonas sp. Is79A3 10932547 YP_004693753.1 CDS Nit79A3_0472 NC_015731.1 506347 507171 D KEGG: nit:NAL212_2605 methane monooxygenase/ammonia monooxygenase, subunit A; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; methane monooxygenase/ammonia monooxygenase subunit A 506347..507171 Nitrosomonas sp. Is79A3 10932548 YP_004693754.1 CDS Nit79A3_0473 NC_015731.1 507171 508433 D KEGG: nit:NAL212_2604 methane monooxygenase/ammonia monooxygenase, subunit B; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; methane monooxygenase/ammonia monooxygenase subunit B 507171..508433 Nitrosomonas sp. Is79A3 10932549 YP_004693755.1 CDS Nit79A3_0474 NC_015731.1 508603 509187 D KEGG: nit:NAL212_2603 hypothetical protein; hypothetical protein 508603..509187 Nitrosomonas sp. Is79A3 10932550 YP_004693756.1 CDS Nit79A3_0475 NC_015731.1 509254 509835 D KEGG: nit:NAL212_2602 hypothetical protein; hypothetical protein 509254..509835 Nitrosomonas sp. Is79A3 10932551 YP_004693757.1 CDS Nit79A3_0476 NC_015731.1 510465 511067 R PFAM: SNARE associated Golgi protein; KEGG: abu:Abu_2024 hypothetical protein; hypothetical protein complement(510465..511067) Nitrosomonas sp. Is79A3 10932552 YP_004693758.1 CDS Nit79A3_0477 NC_015731.1 511127 512065 R KEGG: nit:NAL212_1061 protein-export membrane protein SecF; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF complement(511127..512065) Nitrosomonas sp. Is79A3 10932553 YP_004693759.1 CDS Nit79A3_0478 NC_015731.1 512090 514171 R KEGG: nit:NAL212_1060 protein-export membrane protein SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecD complement(512090..514171) Nitrosomonas sp. Is79A3 10932554 YP_004693760.1 CDS Nit79A3_0479 NC_015731.1 514258 514716 R KEGG: nit:NAL212_1059 preprotein translocase, YajC subunit; TIGRFAM: YajC; PFAM: YajC; preprotein translocase subunit YajC complement(514258..514716) Nitrosomonas sp. Is79A3 10932555 YP_004693761.1 CDS Nit79A3_0480 NC_015731.1 514764 515849 R TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; KEGG: nit:NAL212_1058 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; Queuine tRNA-ribosyltransferase complement(514764..515849) Nitrosomonas sp. Is79A3 10932556 YP_004693762.1 CDS Nit79A3_0481 NC_015731.1 515846 516880 R TIGRFAM: Queuosine biosynthesis protein; HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; KEGG: nit:NAL212_1057 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; S-adenosylmethionine:tRNA ribosyltransferase-isomerase complement(515846..516880) Nitrosomonas sp. Is79A3 10932557 YP_004693763.1 CDS Nit79A3_0484 NC_015731.1 519760 520227 D manually curated; KEGG: rso:RSc2475 hypothetical protein; hypothetical protein 519760..520227 Nitrosomonas sp. Is79A3 10932561 YP_004693764.1 CDS Nit79A3_0485 NC_015731.1 521631 523265 R PFAM: Transposase, IS4-like; KEGG: afe:Lferr_1749 hypothetical protein; transposase IS4 family protein complement(521631..523265) Nitrosomonas sp. Is79A3 10932562 YP_004693765.1 CDS Nit79A3_0486 NC_015731.1 523458 524237 R KEGG: cyt:cce_4803 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(523458..524237) Nitrosomonas sp. Is79A3 10932563 YP_004693766.1 CDS Nit79A3_0487 NC_015731.1 524965 525135 D hypothetical protein 524965..525135 Nitrosomonas sp. Is79A3 10932564 YP_004693767.1 CDS Nit79A3_0488 NC_015731.1 526146 526640 R KEGG: nit:NAL212_1596 hypothetical protein; hypothetical protein complement(526146..526640) Nitrosomonas sp. Is79A3 10932565 YP_004693768.1 CDS Nit79A3_0489 NC_015731.1 527155 527307 R hypothetical protein complement(527155..527307) Nitrosomonas sp. Is79A3 10932566 YP_004693769.1 CDS Nit79A3_0490 NC_015731.1 528304 530157 D KEGG: nit:NAL212_0490 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 528304..530157 Nitrosomonas sp. Is79A3 10932567 YP_004693770.1 CDS Nit79A3_0491 NC_015731.1 530205 530528 R TIGRFAM: Flagellar hook-basal body complex protein FliE; HAMAP: Flagellar hook-basal body complex protein FliE; KEGG: nit:NAL212_0489 flagellar hook-basal body complex subunit FliE; PFAM: Flagellar hook-basal body complex protein FliE; Flagellar hook-basal body complex protein fliE complement(530205..530528) Nitrosomonas sp. Is79A3 10932568 YP_004693771.1 CDS Nit79A3_0492 NC_015731.1 530627 531937 R KEGG: nit:NAL212_0488 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; Fis family transcriptional regulator complement(530627..531937) Nitrosomonas sp. Is79A3 10932569 YP_004693772.1 CDS Nit79A3_0493 NC_015731.1 531942 533132 R KEGG: nit:NAL212_0487 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAS/PAC sensor signal transduction histidine kinase complement(531942..533132) Nitrosomonas sp. Is79A3 10932570 YP_004693773.1 CDS Nit79A3_0494 NC_015731.1 533475 535148 D KEGG: nit:NAL212_0486 flagellar M-ring protein FliF; TIGRFAM: Flagellar FliF M-ring protein; PFAM: Flagellar M-ring C-terminal; Secretory protein YscJ/FliF; flagellar M-ring protein FliF 533475..535148 Nitrosomonas sp. Is79A3 10932571 YP_004693774.1 CDS Nit79A3_0495 NC_015731.1 535141 536136 D KEGG: nit:NAL212_0485 flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG; flagellar motor switch protein FliG 535141..536136 Nitrosomonas sp. Is79A3 10932572 YP_004693775.1 CDS Nit79A3_0496 NC_015731.1 536214 536921 D PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: nit:NAL212_0484 flagellar assembly protein FliH/type III secretion system HrpE; flagellar assembly protein FliH 536214..536921 Nitrosomonas sp. Is79A3 10932573 YP_004693776.1 CDS Nit79A3_0497 NC_015731.1 536924 538330 D TIGRFAM: Flagellar protein export ATPase, FliI; ATPase, type III secretion system, FliI/YscN; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; KEGG: nit:NAL212_0483 flagellar protein export ATPase FliI; SMART: ATPase, AAA+ type, core; flagellar protein export ATPase FliI 536924..538330 Nitrosomonas sp. Is79A3 10932574 YP_004693777.1 CDS Nit79A3_0498 NC_015731.1 538349 538807 D TIGRFAM: Flagellar export FliJ; KEGG: nit:NAL212_0482 flagellar export protein FliJ; flagellar export protein FliJ 538349..538807 Nitrosomonas sp. Is79A3 10932575 YP_004693778.1 CDS Nit79A3_0499 NC_015731.1 538889 540076 D PFAM: Flagellar hook-length control protein; KEGG: nit:NAL212_0481 flagellar hook-length control protein-like protein; flagellar hook-length control protein 538889..540076 Nitrosomonas sp. Is79A3 10932576 YP_004693779.1 CDS Nit79A3_0500 NC_015731.1 540417 540905 D PFAM: Flagellar basal body-associated protein FliL; KEGG: nit:NAL212_0480 flagellar basal body-associated protein FliL; flagellar basal body protein FliL 540417..540905 Nitrosomonas sp. Is79A3 10932577 YP_004693780.1 CDS Nit79A3_0501 NC_015731.1 540913 541890 D KEGG: nit:NAL212_0479 flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA); flagellar motor switch protein FliM 540913..541890 Nitrosomonas sp. Is79A3 10932578 YP_004693781.1 CDS Nit79A3_0502 NC_015731.1 541908 542432 D KEGG: nit:NAL212_0478 flagellar motor switch protein FliN; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA); flagellar motor switch protein FliN 541908..542432 Nitrosomonas sp. Is79A3 10932579 YP_004693782.1 CDS Nit79A3_0503 NC_015731.1 542440 542877 D KEGG: nit:NAL212_0477 flagellar biosynthetic protein FliO; TIGRFAM: Flagellar biosynthesis protein, FliO; PFAM: Flagellar biosynthesis protein, FliO; flagellar biosynthetic protein FliO 542440..542877 Nitrosomonas sp. Is79A3 10932580 YP_004693783.1 CDS Nit79A3_0504 NC_015731.1 542870 543718 D KEGG: nit:NAL212_0476 flagellar biosynthetic protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP 542870..543718 Nitrosomonas sp. Is79A3 10932581 YP_004693784.1 CDS Nit79A3_0505 NC_015731.1 543732 544004 D KEGG: nit:NAL212_0475 flagellar biosynthetic protein FliQ; TIGRFAM: Flagellar biosynthesis protein FliQ; PFAM: Bacterial export protein FliQ, family 3; flagellar biosynthetic protein FliQ 543732..544004 Nitrosomonas sp. Is79A3 10932582 YP_004693785.1 CDS Nit79A3_0506 NC_015731.1 544103 544900 D KEGG: nit:NAL212_0474 flagellar biosynthetic protein FliR; TIGRFAM: Flagellar biosynthesis protein FliR; PFAM: Type III secretion system inner membrane R protein; flagellar biosynthetic protein FliR 544103..544900 Nitrosomonas sp. Is79A3 10932583 YP_004693786.1 CDS Nit79A3_0507 NC_015731.1 545096 546919 D KEGG: nit:NAL212_0473 hypothetical protein; hypothetical protein 545096..546919 Nitrosomonas sp. Is79A3 10932584 YP_004693787.1 CDS Nit79A3_0508 NC_015731.1 546964 548079 R TIGRFAM: tRNA 2-selenouridine synthase; HAMAP: tRNA 2-selenouridine synthase; KEGG: shw:Sputw3181_3681 tRNA 2-selenouridine synthase; SMART: Rhodanese-like; tRNA 2-selenouridine synthase complement(546964..548079) Nitrosomonas sp. Is79A3 10932585 YP_004693788.1 CDS Nit79A3_0509 NC_015731.1 548555 550378 D PFAM: AMP-dependent synthetase/ligase; KEGG: nit:NAL212_0307 long-chain-fatty-acid--(acyl-carrier-protein) ligase; AMP-dependent synthetase/ligase 548555..550378 Nitrosomonas sp. Is79A3 10932586 YP_004693789.1 CDS Nit79A3_0510 NC_015731.1 550385 551302 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: nit:NAL212_0308 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 550385..551302 Nitrosomonas sp. Is79A3 10932587 YP_004693790.1 CDS Nit79A3_0511 NC_015731.1 551333 551587 D PFAM: Phosphopantetheine-binding; KEGG: nit:NAL212_0309 phosphopantetheine-binding protein; phosphopantetheine-binding protein 551333..551587 Nitrosomonas sp. Is79A3 10932588 YP_004693791.1 CDS Nit79A3_0512 NC_015731.1 551587 552768 D PFAM: Aminotransferase, class I/II; KEGG: nit:NAL212_0310 8-amino-7-oxononanoate synthase; class I and II aminotransferase 551587..552768 Nitrosomonas sp. Is79A3 10932589 YP_004693792.1 CDS Nit79A3_0513 NC_015731.1 552934 553584 D KEGG: nit:NAL212_0311 hypothetical protein; hypothetical protein 552934..553584 Nitrosomonas sp. Is79A3 10932590 YP_004693793.1 CDS Nit79A3_0514 NC_015731.1 553610 555796 R KEGG: app:CAP2UW1_1594 pyridine nucleotide-disulfide oxidoreductase; TIGRFAM: Pyridine nucleotide-disulphide oxidoreductase, N-terminal; Selenide water dikinase; PFAM: AIR synthase related protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; AIR synthase related protein, C-terminal; Pyridine nucleotide-disulfide oxidoreductase complement(553610..555796) Nitrosomonas sp. Is79A3 10932591 YP_004693794.1 CDS Nit79A3_0515 NC_015731.1 556021 556536 D PFAM: Peptidoglycan binding-like; KEGG: nit:NAL212_0701 peptidoglycan-binding domain 1 protein; peptidoglycan-binding domain 1 protein 556021..556536 Nitrosomonas sp. Is79A3 10932592 YP_004693795.1 CDS Nit79A3_0516 NC_015731.1 556996 558114 D KEGG: nit:NAL212_0702 hopanoid biosynthesis associated radical SAM protein HpnH; TIGRFAM: Hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM; hopanoid biosynthesis associated radical SAM protein HpnH 556996..558114 Nitrosomonas sp. Is79A3 10932593 YP_004693796.1 CDS Nit79A3_0517 NC_015731.1 558167 559297 D PFAM: Glycosyl transferase, family 2; KEGG: nit:NAL212_0703 glycosyl transferase 2; glycosyl transferase 2 558167..559297 Nitrosomonas sp. Is79A3 10932594 YP_004693797.1 CDS Nit79A3_0518 NC_015731.1 559326 559907 D KEGG: nit:NAL212_0704 hopanoid biosynthesis associated membrane protein HpnM; TIGRFAM: Hopanoid biosynthesis-associated membrane protein HpnM; PFAM: Toluene tolerance; hopanoid biosynthesis associated membrane protein HpnM 559326..559907 Nitrosomonas sp. Is79A3 10932595 YP_004693798.1 CDS Nit79A3_0519 NC_015731.1 559949 562612 D TIGRFAM: Hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: nit:NAL212_0705 hopanoid biosynthesis associated RND transporter like protein HpnN; hopanoid biosynthesis associated RND transporter-like protein HpnN 559949..562612 Nitrosomonas sp. Is79A3 10932596 YP_004693799.1 CDS Nit79A3_0520 NC_015731.1 562616 563887 R PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; KEGG: nit:NAL212_0706 Fmu (Sun) domain-containing protein; Fmu (Sun) domain-containing protein complement(562616..563887) Nitrosomonas sp. Is79A3 10932597 YP_004693800.1 CDS Nit79A3_0521 NC_015731.1 563969 564685 R KEGG: nit:NAL212_0707 hypothetical protein; hypothetical protein complement(563969..564685) Nitrosomonas sp. Is79A3 10932598 YP_004693801.1 CDS Nit79A3_0522 NC_015731.1 564682 565320 R KEGG: nit:NAL212_0708 phosphoribosylglycinamide formyltransferase; TIGRFAM: Phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal; phosphoribosylglycinamide formyltransferase complement(564682..565320) Nitrosomonas sp. Is79A3 10932599 YP_004693802.1 CDS Nit79A3_0523 NC_015731.1 565344 566402 R KEGG: nit:NAL212_0709 phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; phosphoribosylformylglycinamidine cyclo-ligase complement(565344..566402) Nitrosomonas sp. Is79A3 10932600 YP_004693803.1 CDS Nit79A3_0524 NC_015731.1 566802 567323 R hypothetical protein complement(566802..567323) Nitrosomonas sp. Is79A3 10932601 YP_004693804.1 CDS Nit79A3_0525 NC_015731.1 567545 567697 D hypothetical protein 567545..567697 Nitrosomonas sp. Is79A3 10932602 YP_004693805.1 CDS Nit79A3_0526 NC_015731.1 567860 569248 D PFAM: Aminotransferase class-III; KEGG: nit:NAL212_0712 acetylornithine transaminase; class III aminotransferase 567860..569248 Nitrosomonas sp. Is79A3 10932603 YP_004693806.1 CDS Nit79A3_0527 NC_015731.1 569256 570320 D PFAM: Uncharacterised protein family UPF0118; KEGG: nit:NAL212_0713 hypothetical protein; hypothetical protein 569256..570320 Nitrosomonas sp. Is79A3 10932604 YP_004693807.1 CDS Nit79A3_0528 NC_015731.1 570366 571043 D KEGG: nit:NAL212_0714 DnaA regulatory inactivator Hda; TIGRFAM: Chromosomal replication control, regulator Hda; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); chromosome replication initiator DnaA 570366..571043 Nitrosomonas sp. Is79A3 10932605 YP_004693808.1 CDS Nit79A3_0529 NC_015731.1 571040 571702 D TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: nit:NAL212_0715 HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase 571040..571702 Nitrosomonas sp. Is79A3 10932606 YP_004693809.1 CDS Nit79A3_0531 NC_015731.1 572635 574524 R hypothetical protein complement(572635..574524) Nitrosomonas sp. Is79A3 10932608 YP_004693810.1 CDS Nit79A3_0532 NC_015731.1 574632 576140 R TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: nit:NAL212_0716 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; lysyl-tRNA synthetase complement(574632..576140) Nitrosomonas sp. Is79A3 10932609 YP_004693811.1 CDS Nit79A3_0533 NC_015731.1 576428 577666 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; GAF; HAMP linker domain; KEGG: nit:NAL212_0721 diguanylate cyclase with GAF sensor; SMART: Diguanylate cyclase, predicted; GAF sensor-containing diguanylate cyclase complement(576428..577666) Nitrosomonas sp. Is79A3 10932610 YP_004693812.1 CDS Nit79A3_0534 NC_015731.1 577911 578315 D PFAM: Phosphotransferase system, fructose subfamily IIA component; KEGG: nit:NAL212_0722 PTS system fructose subfamily IIA component; PTS system fructose subfamily IIA component 577911..578315 Nitrosomonas sp. Is79A3 10932611 YP_004693813.1 CDS Nit79A3_0535 NC_015731.1 578305 578574 D KEGG: nit:NAL212_0723 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; PFAM: Phosphotransferase system, phosphocarrier HPr protein; Phosphotransferase system, phosphocarrier protein HPr 578305..578574 Nitrosomonas sp. Is79A3 10932612 YP_004693814.1 CDS Nit79A3_0536 NC_015731.1 578571 580298 D KEGG: nit:NAL212_0724 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile region; phosphoenolpyruvate-protein phosphotransferase 578571..580298 Nitrosomonas sp. Is79A3 10932613 YP_004693815.1 CDS Nit79A3_0537 NC_015731.1 580441 581568 D TIGRFAM: Homoserine O-acetyltransferase; HAMAP: Homoserine O-acetyltransferase; KEGG: nit:NAL212_0725 homoserine O-acetyltransferase; PFAM: Alpha/beta hydrolase fold-1; Homoserine O-acetyltransferase 580441..581568 Nitrosomonas sp. Is79A3 10932614 YP_004693816.1 CDS Nit79A3_0538 NC_015731.1 581591 582205 D KEGG: nit:NAL212_0726 methionine biosynthesis protein MetW; TIGRFAM: Methionine biosynthesis MetW; PFAM: Methionine biosynthesis MetW; methionine biosynthesis protein MetW 581591..582205 Nitrosomonas sp. Is79A3 10932615 YP_004693817.1 CDS Nit79A3_0539 NC_015731.1 582231 583070 R PFAM: Protein of unknown function DUF455; KEGG: nit:NAL212_0728 hypothetical protein; hypothetical protein complement(582231..583070) Nitrosomonas sp. Is79A3 10932616 YP_004693818.1 CDS Nit79A3_0540 NC_015731.1 583243 583665 D PFAM: Thioesterase superfamily; KEGG: nit:NAL212_0729 thioesterase superfamily protein; thioesterase 583243..583665 Nitrosomonas sp. Is79A3 10932617 YP_004693819.1 CDS Nit79A3_0541 NC_015731.1 583827 584147 R KEGG: gur:Gura_0563 hypothetical protein; hypothetical protein complement(583827..584147) Nitrosomonas sp. Is79A3 10932618 YP_004693820.1 CDS Nit79A3_0542 NC_015731.1 584131 584424 R KEGG: gur:Gura_0562 hypothetical protein; hypothetical protein complement(584131..584424) Nitrosomonas sp. Is79A3 10932619 YP_004693821.1 CDS Nit79A3_0543 NC_015731.1 584603 585523 D PFAM: Sulfotransferase; KEGG: nit:NAL212_0730 sulfotransferase; sulfotransferase 584603..585523 Nitrosomonas sp. Is79A3 10932620 YP_004693822.1 CDS Nit79A3_0544 NC_015731.1 585589 585783 D PFAM: Addiction module component, CHP02574; addiction module component CHP02574 family protein 585589..585783 Nitrosomonas sp. Is79A3 10932621 YP_004693823.1 CDS Nit79A3_0545 NC_015731.1 586147 586605 R hypothetical protein complement(586147..586605) Nitrosomonas sp. Is79A3 10932622 YP_004693824.1 CDS Nit79A3_0546 NC_015731.1 586598 587536 R hypothetical protein complement(586598..587536) Nitrosomonas sp. Is79A3 10932623 YP_004693825.1 CDS Nit79A3_0547 NC_015731.1 587711 588415 R TIGRFAM: 6-phosphogluconolactonase; KEGG: nit:NAL212_0733 6-phosphogluconolactonase; 6-phosphogluconolactonase complement(587711..588415) Nitrosomonas sp. Is79A3 10932624 YP_004693826.1 CDS Nit79A3_0548 NC_015731.1 588432 589073 R PFAM: Haloacid dehalogenase-like hydrolase; KEGG: nit:NAL212_0734 haloacid dehalogenase domain-containing protein hydrolase; haloacid dehalogenase complement(588432..589073) Nitrosomonas sp. Is79A3 10932625 YP_004693827.1 CDS Nit79A3_0549 NC_015731.1 589076 590005 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: nit:NAL212_0735 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(589076..590005) Nitrosomonas sp. Is79A3 10932626 YP_004693828.1 CDS Nit79A3_0550 NC_015731.1 590010 590948 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; KEGG: nit:NAL212_0736 phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(590010..590948) Nitrosomonas sp. Is79A3 10932627 YP_004693829.1 CDS Nit79A3_0551 NC_015731.1 590945 591715 R PFAM: HpcH/HpaI aldolase; KEGG: nit:NAL212_0737 4-hydroxy-2-oxovalerate aldolase; HpcH/HpaI aldolase complement(590945..591715) Nitrosomonas sp. Is79A3 10932628 YP_004693830.1 CDS Nit79A3_0552 NC_015731.1 591724 592473 R PFAM: Acylneuraminate cytidylyltransferase; KEGG: nit:NAL212_0738 3-deoxy-manno-octulosonate cytidylyltransferase; acylneuraminate cytidylyltransferase complement(591724..592473) Nitrosomonas sp. Is79A3 10932629 YP_004693831.1 CDS Nit79A3_0553 NC_015731.1 592751 594022 D KEGG: nit:NAL212_0739 hypothetical protein; hypothetical protein 592751..594022 Nitrosomonas sp. Is79A3 10932630 YP_004693832.1 CDS Nit79A3_0554 NC_015731.1 594080 594847 D TIGRFAM: Methyltransferase FkbM; KEGG: nit:NAL212_0740 methyltransferase FkbM family; methyltransferase FkbM family 594080..594847 Nitrosomonas sp. Is79A3 10932631 YP_004693833.1 CDS Nit79A3_0555 NC_015731.1 595068 596183 D PFAM: Glycosyl transferase, family 2; KEGG: nit:NAL212_0741 glycosyl transferase 2; glycosyl transferase 2 595068..596183 Nitrosomonas sp. Is79A3 10932632 YP_004693834.1 CDS Nit79A3_0556 NC_015731.1 596246 597439 D PFAM: O-antigen ligase-related; KEGG: nit:NAL212_0742 O-antigen polymerase; O-antigen polymerase 596246..597439 Nitrosomonas sp. Is79A3 10932633 YP_004693835.1 CDS Nit79A3_0557 NC_015731.1 597447 598418 D PFAM: Methyltransferase type 11; KEGG: nit:NAL212_0744 methyltransferase type 11; type 11 methyltransferase 597447..598418 Nitrosomonas sp. Is79A3 10932634 YP_004693836.1 CDS Nit79A3_0558 NC_015731.1 598457 599140 D PFAM: O-methyltransferase, family 3; KEGG: nit:NAL212_0745 O-methyltransferase 3; O-methyltransferase 3 598457..599140 Nitrosomonas sp. Is79A3 10932635 YP_004693837.1 CDS Nit79A3_0559 NC_015731.1 599318 599572 D PFAM: Domain of unknown function DUF2024; KEGG: nit:NAL212_0746 hypothetical protein; hypothetical protein 599318..599572 Nitrosomonas sp. Is79A3 10932636 YP_004693838.1 CDS Nit79A3_0560 NC_015731.1 599673 600188 D KEGG: nit:NAL212_0747 hypothetical protein; hypothetical protein 599673..600188 Nitrosomonas sp. Is79A3 10932637 YP_004693839.1 CDS Nit79A3_0561 NC_015731.1 600247 600591 D PFAM: Arsenate reductase-like; KEGG: nit:NAL212_0748 arsenate reductase like protein; arsenate reductase 600247..600591 Nitrosomonas sp. Is79A3 10932638 YP_004693840.1 CDS Nit79A3_0562 NC_015731.1 600679 601098 R TIGRFAM: Ribosomal protein L19; HAMAP: Ribosomal protein L19; KEGG: nit:NAL212_0749 50S ribosomal protein L19; PFAM: Ribosomal protein L19; 50S ribosomal protein L19 complement(600679..601098) Nitrosomonas sp. Is79A3 10932639 YP_004693841.1 CDS Nit79A3_0563 NC_015731.1 601123 601893 R TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: nit:NAL212_0750 tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase complement(601123..601893) Nitrosomonas sp. Is79A3 10932640 YP_004693842.1 CDS Nit79A3_0564 NC_015731.1 601905 602408 R TIGRFAM: 16S rRNA processing protein RimM; HAMAP: 16S rRNA processing protein RimM; KEGG: nit:NAL212_0751 ribosome maturation factor RimM; PFAM: RimM protein; PRC-barrel; Ribosome maturation factor rimM complement(601905..602408) Nitrosomonas sp. Is79A3 10932641 YP_004693843.1 CDS Nit79A3_0565 NC_015731.1 602440 602706 R TIGRFAM: Ribosomal protein S16; HAMAP: Ribosomal protein S16; KEGG: nit:NAL212_0752 30S ribosomal protein S16; PFAM: Ribosomal protein S16; 30S ribosomal protein S16 complement(602440..602706) Nitrosomonas sp. Is79A3 10932642 YP_004693844.1 CDS Nit79A3_0566 NC_015731.1 602887 604173 D PFAM: Cysteine-rich region, CCG; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: nit:NAL212_0753 hypothetical protein; hypothetical protein 602887..604173 Nitrosomonas sp. Is79A3 10932643 YP_004693845.1 CDS Nit79A3_0567 NC_015731.1 604285 604911 D HAMAP: 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; KEGG: nit:NAL212_0754 ubiquinone biosynthesis family protein; 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 604285..604911 Nitrosomonas sp. Is79A3 10932644 YP_004693846.1 CDS Nit79A3_0568 NC_015731.1 604990 605553 D KEGG: nit:NAL212_0755 hypothetical protein; HAMAP: Protein of unknown function DUF179; PFAM: Protein of unknown function DUF179; hypothetical protein 604990..605553 Nitrosomonas sp. Is79A3 10932645 YP_004693847.1 CDS Nit79A3_0569 NC_015731.1 605566 606051 D SMART: Resolvase, RNase H-like fold; TIGRFAM: Resolvase, holliday junction-type, YqgF-like; KEGG: nit:NAL212_0756 Holliday junction resolvase YqgF; HAMAP: Holliday junction resolvase; PFAM: Resolvase, holliday junction-type, YqgF-like; Holliday junction resolvase 605566..606051 Nitrosomonas sp. Is79A3 10932646 YP_004693848.1 CDS Nit79A3_0570 NC_015731.1 606032 606538 D PFAM: Phosphoribosyltransferase; KEGG: nit:NAL212_0757 uracil phosphoribosyltransferase; phosphoribosyltransferase 606032..606538 Nitrosomonas sp. Is79A3 10932647 YP_004693849.1 CDS Nit79A3_0571 NC_015731.1 606535 607494 D TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; HAMAP: Aspartate carbamoyltransferase; KEGG: nit:NAL212_0758 aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate carbamoyltransferase 606535..607494 Nitrosomonas sp. Is79A3 10932648 YP_004693850.1 CDS Nit79A3_0572 NC_015731.1 607505 608779 D KEGG: nit:NAL212_0759 dihydroorotase, multifunctional complex type; TIGRFAM: Dihydroorotase multifunctional complex type; PFAM: Amidohydrolase 3; dihydroorotase, multifunctional complex type 607505..608779 Nitrosomonas sp. Is79A3 10932649 YP_004693851.1 CDS Nit79A3_0573 NC_015731.1 608850 610943 D PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; KEGG: nit:NAL212_0760 oligopeptidase A; peptidase M3A and M3B thimet/oligopeptidase F 608850..610943 Nitrosomonas sp. Is79A3 10932650 YP_004693852.1 CDS Nit79A3_0574 NC_015731.1 611169 611933 D PFAM: VacJ-like lipoprotein; KEGG: nit:NAL212_0761 VacJ family lipoprotein; VacJ family lipoprotein 611169..611933 Nitrosomonas sp. Is79A3 10932651 YP_004693853.1 CDS Nit79A3_0575 NC_015731.1 612122 612286 D KEGG: pag:PLES_57451 rubredoxin 2; manually curated; PFAM: Rubredoxin-type Fe(Cys)4 protein; Rubredoxin-type Fe(Cys)4 protein 612122..612286 Nitrosomonas sp. Is79A3 10932652 YP_004693854.1 CDS Nit79A3_0576 NC_015731.1 612286 613437 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nit:NAL212_0762 rubredoxin--NAD(+) reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 612286..613437 Nitrosomonas sp. Is79A3 10932653 YP_004693855.1 CDS Nit79A3_0577 NC_015731.1 613505 614119 D TIGRFAM: Intracellular septation protein A; HAMAP: Intracellular septation protein A; KEGG: nit:NAL212_0763 intracellular septation protein A; PFAM: Intracellular septation protein A; intracellular septation protein 613505..614119 Nitrosomonas sp. Is79A3 10932654 YP_004693856.1 CDS Nit79A3_0578 NC_015731.1 614116 614421 D PFAM: YCII-related; KEGG: nmu:Nmul_A2112 YCII-related; hypothetical protein 614116..614421 Nitrosomonas sp. Is79A3 10932655 YP_004693857.1 CDS Nit79A3_0579 NC_015731.1 614586 615380 D PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: nit:NAL212_0765 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 614586..615380 Nitrosomonas sp. Is79A3 10932656 YP_004693858.1 CDS Nit79A3_0580 NC_015731.1 615435 616511 R TIGRFAM: Alanine racemase; HAMAP: Alanine racemase; KEGG: nit:NAL212_0766 alanine racemase; PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; alanine racemase complement(615435..616511) Nitrosomonas sp. Is79A3 10932657 YP_004693859.1 CDS Nit79A3_0581 NC_015731.1 616774 618048 D PFAM: Major facilitator superfamily MFS-1; KEGG: nit:NAL212_0767 major facilitator superfamily MFS_1; major facilitator superfamily protein 616774..618048 Nitrosomonas sp. Is79A3 10932658 YP_004693860.1 CDS Nit79A3_0582 NC_015731.1 618313 622524 D KEGG: npu:Npun_F6044 SNF2-related protein; PFAM: SNF2-related; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SNF2-like protein 618313..622524 Nitrosomonas sp. Is79A3 10932659 YP_004693861.1 CDS Nit79A3_0583 NC_015731.1 622802 623044 D KEGG: neu:NE0262 hypothetical protein; TIGRFAM: addiction module antidote protein, CC2985; PFAM: addiction module antidote protein, CC2985; addiction module antidote protein 622802..623044 Nitrosomonas sp. Is79A3 10932660 YP_004693862.1 CDS Nit79A3_0584 NC_015731.1 623173 624162 R PFAM: EF-Hand domain; KEGG: gca:Galf_2016 EF-Hand, calmodulin; EF hand repeat-containing protein complement(623173..624162) Nitrosomonas sp. Is79A3 10932661 YP_004693863.1 CDS Nit79A3_0585 NC_015731.1 624311 624889 R KEGG: gca:Galf_2015 hypothetical protein; hypothetical protein complement(624311..624889) Nitrosomonas sp. Is79A3 10932662 YP_004693864.1 CDS Nit79A3_0586 NC_015731.1 625107 625811 D KEGG: gca:Galf_2014 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator 625107..625811 Nitrosomonas sp. Is79A3 10932663 YP_004693865.1 CDS Nit79A3_0587 NC_015731.1 625815 627158 D KEGG: gca:Galf_2013 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 625815..627158 Nitrosomonas sp. Is79A3 10932664 YP_004693866.1 CDS Nit79A3_0588 NC_015731.1 627466 628197 R KEGG: nit:NAL212_0768 phage SPO1 DNA polymerase-like protein; TIGRFAM: Phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like; phage SPO1 DNA polymerase-like protein complement(627466..628197) Nitrosomonas sp. Is79A3 10932665 YP_004693867.1 CDS Nit79A3_0589 NC_015731.1 628194 628655 R KEGG: nit:NAL212_0769 ribosomal-protein-alanine acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase complement(628194..628655) Nitrosomonas sp. Is79A3 10932666 YP_004693868.1 CDS Nit79A3_0590 NC_015731.1 628652 629326 R KEGG: nit:NAL212_0770 universal protein YeaZ; TIGRFAM: universal protein YeaZ; PFAM: Peptidase M22, glycoprotease; hypothetical protein complement(628652..629326) Nitrosomonas sp. Is79A3 10932667 YP_004693869.1 CDS Nit79A3_0591 NC_015731.1 629421 629963 R KEGG: nit:NAL212_0771 2'-5' RNA ligase; TIGRFAM: 2',5' RNA ligase; PFAM: Phosphoesterase, HXTX; 2'-5' RNA ligase complement(629421..629963) Nitrosomonas sp. Is79A3 10932668 YP_004693870.1 CDS Nit79A3_0592 NC_015731.1 629956 630453 R TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; KEGG: nit:NAL212_0772 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(629956..630453) Nitrosomonas sp. Is79A3 10932669 YP_004693871.1 CDS Nit79A3_0593 NC_015731.1 630450 631154 R TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; HAMAP: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; KEGG: nit:NAL212_0773 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(630450..631154) Nitrosomonas sp. Is79A3 10932670 YP_004693872.1 CDS Nit79A3_0594 NC_015731.1 631399 632506 D manually curated; peptide chain releast factor 2 join(631399..631479,631481..632506) Nitrosomonas sp. Is79A3 10932671 YP_004693873.1 CDS Nit79A3_0595 NC_015731.1 638267 639211 D PFAM: Peptidase S49; KEGG: nit:NAL212_0775 peptidase S49; peptidase S49 638267..639211 Nitrosomonas sp. Is79A3 10932677 YP_004693874.1 CDS Nit79A3_0596 NC_015731.1 639322 640218 R KEGG: nit:NAL212_0783 dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(639322..640218) Nitrosomonas sp. Is79A3 10932678 YP_004693875.1 CDS Nit79A3_0597 NC_015731.1 640218 641273 R KEGG: nit:NAL212_0784 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase complement(640218..641273) Nitrosomonas sp. Is79A3 10932679 YP_004693876.1 CDS Nit79A3_0598 NC_015731.1 641342 642694 R TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal; HAMAP: tRNA(Ile)-lysidine synthase; KEGG: nit:NAL212_0785 tRNA(Ile)-lysidine synthetase; PFAM: PP-loop; Lysidine-tRNA(Ile) synthetase, substrate-binding domain; tRNA(Ile)-lysidine synthase complement(641342..642694) Nitrosomonas sp. Is79A3 10932680 YP_004693877.1 CDS Nit79A3_0599 NC_015731.1 642663 643631 R TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; KEGG: nit:NAL212_0786 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha complement(642663..643631) Nitrosomonas sp. Is79A3 10932681 YP_004693878.1 CDS Nit79A3_0600 NC_015731.1 643825 644349 D KEGG: nit:NAL212_0787 methionine-R-sulfoxide reductase; TIGRFAM: Methionine sulphoxide reductase B; PFAM: Methionine sulphoxide reductase B; methionine-R-sulfoxide reductase 643825..644349 Nitrosomonas sp. Is79A3 10932682 YP_004693879.1 CDS Nit79A3_0601 NC_015731.1 644354 645007 D TIGRFAM: Peptide methionine sulphoxide reductase MsrA; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: nit:NAL212_0788 peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA; peptide methionine sulfoxide reductase 644354..645007 Nitrosomonas sp. Is79A3 10932683 YP_004693880.1 CDS Nit79A3_0602 NC_015731.1 645018 646142 D KEGG: nit:NAL212_0789 cupin, JmjC-type; PFAM: Cupin 4; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase; cupin 645018..646142 Nitrosomonas sp. Is79A3 10932684 YP_004693881.1 CDS Nit79A3_0603 NC_015731.1 646309 646428 D KEGG: nit:NAL212_0406 hypothetical protein; hypothetical protein 646309..646428 Nitrosomonas sp. Is79A3 10932685 YP_004693882.1 CDS Nit79A3_0604 NC_015731.1 646716 646868 D KEGG: nit:NAL212_2773 hypothetical protein; hypothetical protein 646716..646868 Nitrosomonas sp. Is79A3 10932686 YP_004693883.1 CDS Nit79A3_0605 NC_015731.1 647139 647351 D KEGG: nit:NAL212_2774 hypothetical protein; hypothetical protein 647139..647351 Nitrosomonas sp. Is79A3 10932687 YP_004693884.1 CDS Nit79A3_0606 NC_015731.1 647500 648657 R PFAM: NlpBDapX lipoprotein; KEGG: nit:NAL212_2098 transmembrane protein; NlpBDapX family lipoprotein complement(647500..648657) Nitrosomonas sp. Is79A3 10932688 YP_004693885.1 CDS Nit79A3_0607 NC_015731.1 648659 649546 R TIGRFAM: Dihydrodipicolinate synthase subfamily; HAMAP: Dihydrodipicolinate synthase; KEGG: nit:NAL212_2097 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; Dihydrodipicolinate synthase complement(648659..649546) Nitrosomonas sp. Is79A3 10932689 YP_004693886.1 CDS Nit79A3_0608 NC_015731.1 649849 650811 R PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein complement(649849..650811) Nitrosomonas sp. Is79A3 10932690 YP_004693887.1 CDS Nit79A3_0609 NC_015731.1 650873 653488 R TIGRFAM: Chaperonin ClpB; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: nit:NAL212_2096 ATP-dependent chaperone ClpB; SMART: ATPase, AAA+ type, core; ATP-dependent chaperone ClpB complement(650873..653488) Nitrosomonas sp. Is79A3 10932691 YP_004693888.1 CDS Nit79A3_0610 NC_015731.1 653554 656652 R TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; KEGG: nit:NAL212_2095 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAC motif; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(653554..656652) Nitrosomonas sp. Is79A3 10932692 YP_004693889.1 CDS Nit79A3_0611 NC_015731.1 656873 658360 R PFAM: Glutamate synthase, central-C; KEGG: nit:NAL212_2094 glutamate synthase (NADPH); ferredoxin-dependent glutamate synthase complement(656873..658360) Nitrosomonas sp. Is79A3 10932693 YP_004693890.1 CDS Nit79A3_0612 NC_015731.1 658504 659367 D KEGG: nit:NAL212_2084 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 658504..659367 Nitrosomonas sp. Is79A3 10932694 YP_004693891.1 CDS Nit79A3_0613 NC_015731.1 659461 660906 R PFAM: Tetrapyrrole methylase; Sirohaem synthase, dimerisation domain; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; Sirohaem synthase, N-terminal; HAMAP: Siroheme synthase; KEGG: nit:NAL212_2083 uroporphyrin-III C-methyltransferase; Siroheme synthase complement(659461..660906) Nitrosomonas sp. Is79A3 10932695 YP_004693892.1 CDS Nit79A3_0614 NC_015731.1 661068 662066 R TIGRFAM: Phosphate binding protein; KEGG: nit:NAL212_2082 phosphate binding protein; phosphate binding protein complement(661068..662066) Nitrosomonas sp. Is79A3 10932696 YP_004693893.1 CDS Nit79A3_0615 NC_015731.1 662301 663662 R KEGG: nit:NAL212_2080 phosphoglucosamine mutase; TIGRFAM: Phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; phosphoglucosamine mutase complement(662301..663662) Nitrosomonas sp. Is79A3 10932697 YP_004693894.1 CDS Nit79A3_0616 NC_015731.1 663731 664540 R KEGG: nit:NAL212_2079 dihydropteroate synthase; TIGRFAM: Dihydropteroate synthase; PFAM: Dihydropteroate synthase, DHPS; dihydropteroate synthase complement(663731..664540) Nitrosomonas sp. Is79A3 10932698 YP_004693895.1 CDS Nit79A3_0617 NC_015731.1 664641 666554 R TIGRFAM: Peptidase M41, FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; KEGG: nit:NAL212_2078 ATP-dependent metalloprotease FtsH; SMART: ATPase, AAA+ type, core; ATP-dependent metalloprotease FtsH complement(664641..666554) Nitrosomonas sp. Is79A3 10932699 YP_004693896.1 CDS Nit79A3_0618 NC_015731.1 666727 667344 R KEGG: nit:NAL212_2077 ribosomal RNA methyltransferase RrmJ/FtsJ; HAMAP: Ribosomal RNA large subunit methyltransferase E; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; Ribosomal RNA large subunit methyltransferase E complement(666727..667344) Nitrosomonas sp. Is79A3 10932700 YP_004693897.1 CDS Nit79A3_0619 NC_015731.1 667375 667728 D KEGG: nit:NAL212_2076 hypothetical protein; TIGRFAM: RNA-binding, CRM domain, prokaryote; PFAM: RNA-binding, CRM domain; RNA-binding, CRM domain-containing protein 667375..667728 Nitrosomonas sp. Is79A3 10932701 YP_004693898.1 CDS Nit79A3_0620 NC_015731.1 667750 668226 R TIGRFAM: Prokaryotic transcription elongation factor GreA; HAMAP: Transcription elongation factor greA; KEGG: nit:NAL212_2075 transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; transcription elongation factor GreA complement(667750..668226) Nitrosomonas sp. Is79A3 10932702 YP_004693899.1 CDS Nit79A3_0621 NC_015731.1 668286 671495 R KEGG: nit:NAL212_2074 carbamoyl-phosphate synthase, large subunit; TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation; MGS-like; carbamoyl-phosphate synthase, large subunit complement(668286..671495) Nitrosomonas sp. Is79A3 10932703 YP_004693900.1 CDS Nit79A3_0622 NC_015731.1 671543 672697 R KEGG: nit:NAL212_2073 carbamoyl-phosphate synthase, small subunit; TIGRFAM: Carbamoyl phosphate synthase, small subunit; PFAM: Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal; carbamoyl-phosphate synthase, small subunit complement(671543..672697) Nitrosomonas sp. Is79A3 10932704 YP_004693901.1 CDS Nit79A3_0623 NC_015731.1 672911 674737 R KEGG: nit:NAL212_1105 oxaloacetate decarboxylase alpha subunit; TIGRFAM: Oxaloacetate decarboxylase, alpha subunit; PFAM: Conserved carboxylase region; Pyruvate carboxyltransferase; Biotin/lipoyl attachment; oxaloacetate decarboxylase subunit alpha complement(672911..674737) Nitrosomonas sp. Is79A3 10932705 YP_004693902.1 CDS Nit79A3_0624 NC_015731.1 674771 676192 R KEGG: nit:NAL212_1106 acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; acetyl-CoA carboxylase, biotin carboxylase complement(674771..676192) Nitrosomonas sp. Is79A3 10932706 YP_004693903.1 CDS Nit79A3_0625 NC_015731.1 676497 676844 D KEGG: pca:Pcar_3050 hypothetical protein; hypothetical protein 676497..676844 Nitrosomonas sp. Is79A3 10932707 YP_004693904.1 CDS Nit79A3_0626 NC_015731.1 677088 678581 R PFAM: 5'-Nucleotidase, C-terminal; Metallophosphoesterase; KEGG: ava:Ava_3996 metallophosphoesterase; 5'-nucleotidase complement(677088..678581) Nitrosomonas sp. Is79A3 10932708 YP_004693905.1 CDS Nit79A3_0627 NC_015731.1 679016 681079 D KEGG: nit:NAL212_2775 hypothetical protein; hypothetical protein 679016..681079 Nitrosomonas sp. Is79A3 10932709 YP_004693906.1 CDS Nit79A3_0628 NC_015731.1 681130 682410 D PFAM: Cytochrome P450; KEGG: nit:NAL212_2776 cytochrome P450; cytochrome P450 681130..682410 Nitrosomonas sp. Is79A3 10932710 YP_004693907.1 CDS Nit79A3_0629 NC_015731.1 682546 682737 R hypothetical protein complement(682546..682737) Nitrosomonas sp. Is79A3 10932711 YP_004693908.1 CDS Nit79A3_0630 NC_015731.1 682905 683651 D PFAM: Protein of unknown function DUF82; KEGG: sti:Sthe_2697 protein of unknown function DUF82; hypothetical protein 682905..683651 Nitrosomonas sp. Is79A3 10932712 YP_004693909.1 CDS Nit79A3_0631 NC_015731.1 683885 684976 D KEGG: nit:NAL212_1324 hypothetical protein; hypothetical protein 683885..684976 Nitrosomonas sp. Is79A3 10932713 YP_004693910.1 CDS Nit79A3_0632 NC_015731.1 685071 685511 R KEGG: tnp:Tnap_1460 DNA-(apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase; DNA-(apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase complement(685071..685511) Nitrosomonas sp. Is79A3 10932714 YP_004693911.1 CDS Nit79A3_0633 NC_015731.1 685704 686315 D KEGG: mmb:Mmol_1803 protein of unknown function DUF1555; hypothetical protein 685704..686315 Nitrosomonas sp. Is79A3 10932715 YP_004693912.1 CDS Nit79A3_0634 NC_015731.1 686610 686783 D KEGG: nit:NAL212_2285 hypothetical protein; hypothetical protein 686610..686783 Nitrosomonas sp. Is79A3 10932716 YP_004693913.1 CDS Nit79A3_0635 NC_015731.1 686814 687305 R TIGRFAM: Peptidase A8, signal peptidase II; HAMAP: Peptidase A8, signal peptidase II; KEGG: nit:NAL212_2286 lipoprotein signal peptidase; PFAM: Peptidase A8, signal peptidase II; lipoprotein signal peptidase complement(686814..687305) Nitrosomonas sp. Is79A3 10932717 YP_004693914.1 CDS Nit79A3_0636 NC_015731.1 687339 690146 R TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; HAMAP: Isoleucyl-tRNA synthetase; KEGG: nit:NAL212_2287 isoleucyl-tRNA synthetase; Isoleucyl-tRNA synthetase complement(687339..690146) Nitrosomonas sp. Is79A3 10932718 YP_004693915.1 CDS Nit79A3_0637 NC_015731.1 690188 691141 R TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: nit:NAL212_2288 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; riboflavin biosynthesis protein RibF complement(690188..691141) Nitrosomonas sp. Is79A3 10932719 YP_004693916.1 CDS Nit79A3_0638 NC_015731.1 691282 692397 D PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein 691282..692397 Nitrosomonas sp. Is79A3 10932720 YP_004693917.1 CDS Nit79A3_0639 NC_015731.1 692564 693166 D KEGG: nit:NAL212_2756 regulatory protein TetR; manually curated; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; TetR family transcriptional regulator 692564..693166 Nitrosomonas sp. Is79A3 10932721 YP_004693918.1 CDS Nit79A3_0640 NC_015731.1 693188 693961 R PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; KEGG: nit:NAL212_2755 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein complement(693188..693961) Nitrosomonas sp. Is79A3 10932722 YP_004693919.1 CDS Nit79A3_0641 NC_015731.1 693974 695404 R TIGRFAM: Peptidase S41A, C-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: nit:NAL212_2754 carboxyl-terminal protease; SMART: Peptidase S41; PDZ/DHR/GLGF; carboxyl-terminal protease complement(693974..695404) Nitrosomonas sp. Is79A3 10932723 YP_004693920.1 CDS Nit79A3_0642 NC_015731.1 695451 696695 R PFAM: Peptidase M23; KEGG: nit:NAL212_2753 peptidase M23; peptidase M23 complement(695451..696695) Nitrosomonas sp. Is79A3 10932724 YP_004693921.1 CDS Nit79A3_0643 NC_015731.1 696722 697471 R TIGRFAM: Phosphoglycerate mutase 1; HAMAP: Phosphoglycerate mutase 1; KEGG: nit:NAL212_2752 phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase complement(696722..697471) Nitrosomonas sp. Is79A3 10932725 YP_004693922.1 CDS Nit79A3_0644 NC_015731.1 697808 698242 D KEGG: nit:NAL212_2157 rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; Rhodanese-like protein 697808..698242 Nitrosomonas sp. Is79A3 10932726 YP_004693923.1 CDS Nit79A3_0645 NC_015731.1 698251 698508 D KEGG: nit:NAL212_2156 glutaredoxin 3; TIGRFAM: Glutaredoxin, GrxC; PFAM: Glutaredoxin; glutaredoxin 3 698251..698508 Nitrosomonas sp. Is79A3 10932727 YP_004693924.1 CDS Nit79A3_0646 NC_015731.1 698582 699019 D TIGRFAM: Bacterial protein export chaperone SecB; HAMAP: Bacterial protein export chaperone SecB; KEGG: nit:NAL212_2155 protein-export protein SecB; PFAM: Bacterial protein export chaperone SecB; Protein-export protein secB 698582..699019 Nitrosomonas sp. Is79A3 10932728 YP_004693925.1 CDS Nit79A3_0647 NC_015731.1 699058 699540 D PFAM: Protein of unknown function DUF1058; KEGG: nit:NAL212_2154 hypothetical protein; hypothetical protein 699058..699540 Nitrosomonas sp. Is79A3 10932729 YP_004693926.1 CDS Nit79A3_0648 NC_015731.1 699537 700529 D KEGG: nit:NAL212_2153 NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein; HAMAP: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; Glycerol-3-phosphate dehydrogenase (NAD(P)+) 699537..700529 Nitrosomonas sp. Is79A3 10932730 YP_004693927.1 CDS Nit79A3_0649 NC_015731.1 700767 701039 D KEGG: nit:NAL212_2152 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; histone family protein DNA-binding protein 700767..701039 Nitrosomonas sp. Is79A3 10932731 YP_004693928.1 CDS Nit79A3_0650 NC_015731.1 701316 703199 D PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; KEGG: nit:NAL212_2151 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 701316..703199 Nitrosomonas sp. Is79A3 10932734 YP_004693929.1 CDS Nit79A3_0651 NC_015731.1 703249 704034 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nit:NAL212_2150 enoyl-(acyl-carrier-protein) reductase (NADH); short-chain dehydrogenase/reductase SDR complement(703249..704034) Nitrosomonas sp. Is79A3 10932735 YP_004693930.1 CDS Nit79A3_0652 NC_015731.1 704189 706366 D PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: nit:NAL212_2149 ABC-type transporter, periplasmic subunit; ABC transporter substrate-binding protein 704189..706366 Nitrosomonas sp. Is79A3 10932736 YP_004693931.1 CDS Nit79A3_0653 NC_015731.1 706388 707365 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: nit:NAL212_2148 ABC-type transporter, integral membrane subunit; ABC transporter permease 706388..707365 Nitrosomonas sp. Is79A3 10932737 YP_004693932.1 CDS Nit79A3_0654 NC_015731.1 707601 710279 D PFAM: CoA-binding; GCN5-related N-acetyltransferase; KEGG: gca:Galf_1381 CoA-binding domain-containing protein; CoA-binding domain-containing protein 707601..710279 Nitrosomonas sp. Is79A3 10932738 YP_004693933.1 CDS Nit79A3_0655 NC_015731.1 710337 711260 D PFAM: Histone deacetylase superfamily; KEGG: gca:Galf_1380 histone deacetylase superfamily; histone deacetylase superfamily protein 710337..711260 Nitrosomonas sp. Is79A3 10932739 YP_004693934.1 CDS Nit79A3_0656 NC_015731.1 711257 711409 R hypothetical protein complement(711257..711409) Nitrosomonas sp. Is79A3 10932740 YP_004693935.1 CDS Nit79A3_0657 NC_015731.1 711478 711954 D KEGG: nit:NAL212_1598 phenylacetic acid degradation-like protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily; phenylacetic acid degradation-like protein 711478..711954 Nitrosomonas sp. Is79A3 10932741 YP_004693936.1 CDS Nit79A3_0658 NC_015731.1 712050 712511 R KEGG: nit:NAL212_1599 hypothetical protein; hypothetical protein complement(712050..712511) Nitrosomonas sp. Is79A3 10932742 YP_004693937.1 CDS Nit79A3_0659 NC_015731.1 712670 713254 R KEGG: afe:Lferr_0145 transposase; hypothetical protein complement(712670..713254) Nitrosomonas sp. Is79A3 10932743 YP_004693938.1 CDS Nit79A3_0660 NC_015731.1 713227 713730 R KEGG: afe:Lferr_0146 hypothetical protein; hypothetical protein complement(713227..713730) Nitrosomonas sp. Is79A3 10932744 YP_004693939.1 CDS Nit79A3_0661 NC_015731.1 714058 715413 D KEGG: nit:NAL212_1600 hypothetical protein; hypothetical protein 714058..715413 Nitrosomonas sp. Is79A3 10932745 YP_004693940.1 CDS Nit79A3_0662 NC_015731.1 715421 716800 R KEGG: nit:NAL212_1602 L-serine dehydratase 1; TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; L-serine dehydratase 1 complement(715421..716800) Nitrosomonas sp. Is79A3 10932746 YP_004693941.1 CDS Nit79A3_0663 NC_015731.1 717215 720544 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; PAS fold-4; PAS fold; KEGG: slt:Slit_0879 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 717215..720544 Nitrosomonas sp. Is79A3 10932747 YP_004693942.1 CDS Nit79A3_0664 NC_015731.1 720691 721356 R TIGRFAM: thiopurine S-methyltransferase, Se/Te detoxification family; HAMAP: Thiopurine S-methyltransferase; KEGG: nmu:Nmul_A2259 thiopurine S-methyltransferase; PFAM: Thiopurine S-methyltransferase; thiopurine S-methyltransferase complement(720691..721356) Nitrosomonas sp. Is79A3 10932748 YP_004693943.1 CDS Nit79A3_0665 NC_015731.1 721356 723173 R KEGG: nit:NAL212_0207 allophanate hydrolase; TIGRFAM: Allophanate hydrolase; PFAM: Amidase; allophanate hydrolase complement(721356..723173) Nitrosomonas sp. Is79A3 10932749 YP_004693944.1 CDS Nit79A3_0666 NC_015731.1 723176 726802 R TIGRFAM: Urea carboxylase; Allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; KEGG: nit:NAL212_0208 UreA carboxylase; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; urea carboxylase complement(723176..726802) Nitrosomonas sp. Is79A3 10932750 YP_004693945.1 CDS Nit79A3_0667 NC_015731.1 726866 727531 R KEGG: nmu:Nmul_A0942 hypothetical protein; TIGRFAM: Urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989; urea carboxylase complement(726866..727531) Nitrosomonas sp. Is79A3 10932751 YP_004693946.1 CDS Nit79A3_0668 NC_015731.1 727528 728253 R KEGG: nit:NAL212_0210 UreA carboxylase-associated protein 2; TIGRFAM: Urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989; urea carboxylase complement(727528..728253) Nitrosomonas sp. Is79A3 10932752 YP_004693947.1 CDS Nit79A3_0669 NC_015731.1 728279 729715 R PFAM: Amino acid permease-associated region; KEGG: nit:NAL212_0211 amino acid permease-associated region; amino acid permease complement(728279..729715) Nitrosomonas sp. Is79A3 10932753 YP_004693948.1 CDS Nit79A3_0670 NC_015731.1 730218 730826 D hypothetical protein 730218..730826 Nitrosomonas sp. Is79A3 10932754 YP_004693949.1 CDS Nit79A3_0671 NC_015731.1 731040 731294 R KEGG: nwa:Nwat_2514 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein complement(731040..731294) Nitrosomonas sp. Is79A3 10932755 YP_004693950.1 CDS Nit79A3_0672 NC_015731.1 731517 732053 R KEGG: nit:NAL212_0298 hypothetical protein; hypothetical protein complement(731517..732053) Nitrosomonas sp. Is79A3 10932756 YP_004693951.1 CDS Nit79A3_0673 NC_015731.1 732459 733676 D PFAM: Aminotransferase, class V/Cysteine desulfurase; KEGG: nit:NAL212_0299 serine--pyruvate transaminase; class V aminotransferase 732459..733676 Nitrosomonas sp. Is79A3 10932757 YP_004693952.1 CDS Nit79A3_0674 NC_015731.1 733790 734782 D PFAM: Glycosyl transferase, family 4, conserved region; KEGG: nit:NAL212_0300 glycosyl transferase 4; glycosyltransferase 733790..734782 Nitrosomonas sp. Is79A3 10932758 YP_004693953.1 CDS Nit79A3_0675 NC_015731.1 734784 736673 D PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: nit:NAL212_0301 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD 734784..736673 Nitrosomonas sp. Is79A3 10932759 YP_004693954.1 CDS Nit79A3_0676 NC_015731.1 736716 738431 R PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: nit:NAL212_0302 xenobiotic-transporting ATPase; ABC transporter complement(736716..738431) Nitrosomonas sp. Is79A3 10932760 YP_004693955.1 CDS Nit79A3_0677 NC_015731.1 738584 739516 D KEGG: nit:NAL212_0303 glucose-1-phosphate thymidylyltransferase; TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase 738584..739516 Nitrosomonas sp. Is79A3 10932761 YP_004693956.1 CDS Nit79A3_0678 NC_015731.1 739530 740078 D KEGG: nit:NAL212_0304 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 739530..740078 Nitrosomonas sp. Is79A3 10932762 YP_004693957.1 CDS Nit79A3_0679 NC_015731.1 740089 741438 D KEGG: nit:NAL212_0305 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: ATPase, AAA+ type, core; DNA repair protein RadA 740089..741438 Nitrosomonas sp. Is79A3 10932763 YP_004693958.1 CDS Nit79A3_0680 NC_015731.1 741511 742296 D KEGG: nit:NAL212_0306 alkaline phytoceramidase; alkaline phytoceramidase 741511..742296 Nitrosomonas sp. Is79A3 10932764 YP_004693959.1 CDS Nit79A3_0681 NC_015731.1 742328 742870 R KEGG: pph:Ppha_2274 hypothetical protein; hypothetical protein complement(742328..742870) Nitrosomonas sp. Is79A3 10932765 YP_004693960.1 CDS Nit79A3_0682 NC_015731.1 742969 744351 R KEGG: nit:NAL212_2812 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein complement(742969..744351) Nitrosomonas sp. Is79A3 10932766 YP_004693961.1 CDS Nit79A3_0683 NC_015731.1 744690 745892 R SMART: RNA-binding S4; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; KEGG: nit:NAL212_2811 tyrosyl-tRNA synthetase; HAMAP: Tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; RNA-binding S4; Tyrosyl-tRNA synthetase complement(744690..745892) Nitrosomonas sp. Is79A3 10932767 YP_004693962.1 CDS Nit79A3_0684 NC_015731.1 746046 747380 D PFAM: Peptidase M23; KEGG: nit:NAL212_2810 peptidase M23; peptidase M23 746046..747380 Nitrosomonas sp. Is79A3 10932768 YP_004693963.1 CDS Nit79A3_0685 NC_015731.1 747509 748582 D KEGG: nit:NAL212_2809 hypothetical protein; HAMAP: Anhydro-N-acetylmuramic acid kinase; PFAM: Anhydro-N-acetylmuramic acid kinase; Anhydro-N-acetylmuramic acid kinase 747509..748582 Nitrosomonas sp. Is79A3 10932769 YP_004693964.1 CDS Nit79A3_0686 NC_015731.1 748610 748954 R TIGRFAM: FeS cluster insertion; HAMAP: Iron--sulfur cluster insertion protein erpA; KEGG: nit:NAL212_2808 iron-sulfur cluster assembly accessory protein; PFAM: FeS cluster biogenesis; Iron--sulfur cluster insertion protein erpA complement(748610..748954) Nitrosomonas sp. Is79A3 10932770 YP_004693965.1 CDS Nit79A3_0687 NC_015731.1 749036 749497 R PFAM: Protein of unknown function DUF583; KEGG: nit:NAL212_2807 hypothetical protein; hypothetical protein complement(749036..749497) Nitrosomonas sp. Is79A3 10932771 YP_004693966.1 CDS Nit79A3_0688 NC_015731.1 749510 750244 R KEGG: nit:NAL212_2806 hypothetical protein; hypothetical protein complement(749510..750244) Nitrosomonas sp. Is79A3 10932772 YP_004693967.1 CDS Nit79A3_0689 NC_015731.1 750370 751398 R TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: nit:NAL212_2805 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase complement(750370..751398) Nitrosomonas sp. Is79A3 10932773 YP_004693968.1 CDS Nit79A3_0690 NC_015731.1 751506 751898 R PFAM: Ribosomal protein S9; KEGG: nit:NAL212_2804 30S ribosomal protein S9; 30S ribosomal protein S9 complement(751506..751898) Nitrosomonas sp. Is79A3 10932774 YP_004693969.1 CDS Nit79A3_0691 NC_015731.1 751902 752336 R KEGG: nit:NAL212_2803 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13; 50S ribosomal protein L13 complement(751902..752336) Nitrosomonas sp. Is79A3 10932775 YP_004693970.1 CDS Nit79A3_0692 NC_015731.1 752579 754333 D TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; HAMAP: Glutaminyl-tRNA synthetase; KEGG: nit:NAL212_2802 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; Glutaminyl-tRNA synthetase 752579..754333 Nitrosomonas sp. Is79A3 10932776 YP_004693971.1 CDS Nit79A3_0693 NC_015731.1 754326 754703 D PFAM: Nucleotidyltransferase; KEGG: neu:NE2231 hypothetical protein; DNA polymerase beta domain-containing protein 754326..754703 Nitrosomonas sp. Is79A3 10932777 YP_004693972.1 CDS Nit79A3_0694 NC_015731.1 754691 755107 D PFAM: Protein of unknown function DUF86; KEGG: pph:Ppha_1588 protein of unknown function DUF86; hypothetical protein 754691..755107 Nitrosomonas sp. Is79A3 10932778 YP_004693973.1 CDS Nit79A3_0695 NC_015731.1 755185 755445 D KEGG: slt:Slit_1337 hypothetical protein; hypothetical protein 755185..755445 Nitrosomonas sp. Is79A3 10932779 YP_004693974.1 CDS Nit79A3_0696 NC_015731.1 755523 756263 R KEGG: vex:VEA_003227 hypothetical protein; hypothetical protein complement(755523..756263) Nitrosomonas sp. Is79A3 10932780 YP_004693975.1 CDS Nit79A3_0697 NC_015731.1 756967 759303 D KEGG: bid:Bind_1249 TPR repeat-containing protein; hypothetical protein 756967..759303 Nitrosomonas sp. Is79A3 10932781 YP_004693976.1 CDS Nit79A3_0698 NC_015731.1 759429 761657 R KEGG: nit:NAL212_1762 Tex-like protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; SMART: Resolvase, RNase H-like fold; Tex-like protein complement(759429..761657) Nitrosomonas sp. Is79A3 10932782 YP_004693977.1 CDS Nit79A3_0699 NC_015731.1 761739 762077 R KEGG: nit:NAL212_1761 hypothetical protein; hypothetical protein complement(761739..762077) Nitrosomonas sp. Is79A3 10932783 YP_004693978.1 CDS Nit79A3_0700 NC_015731.1 762123 763010 D PFAM: exonuclease, RdgC; KEGG: nit:NAL212_1760 exonuclease RdgC; exonuclease RdgC 762123..763010 Nitrosomonas sp. Is79A3 10932784 YP_004693979.1 CDS Nit79A3_0701 NC_015731.1 763026 763709 R KEGG: nit:NAL212_1759 hypothetical protein; hypothetical protein complement(763026..763709) Nitrosomonas sp. Is79A3 10932785 YP_004693980.1 CDS Nit79A3_0702 NC_015731.1 763749 765065 R TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase; KEGG: nit:NAL212_1758 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; Seryl-tRNA synthetase complement(763749..765065) Nitrosomonas sp. Is79A3 10932786 YP_004693981.1 CDS Nit79A3_0703 NC_015731.1 765154 766488 R KEGG: nit:NAL212_1757 MgsA AAA+ ATPase domain-containing protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; ATPase AAA complement(765154..766488) Nitrosomonas sp. Is79A3 10932787 YP_004693982.1 CDS Nit79A3_0704 NC_015731.1 766466 767092 R TIGRFAM: Outer membrane lipoprotein carrier protein LolA, Proteobacteria; HAMAP: Outer membrane lipoprotein carrier protein LolA, Proteobacteria; KEGG: nit:NAL212_1756 outer membrane lipoprotein carrier protein LolA; PFAM: Outer membrane lipoprotein carrier protein LolA; Outer-membrane lipoprotein carrier protein complement(766466..767092) Nitrosomonas sp. Is79A3 10932788 YP_004693983.1 CDS Nit79A3_0705 NC_015731.1 767149 769443 R KEGG: nit:NAL212_1755 cell division protein FtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: ATPase, AAA+ type, core; DNA translocase FtsK complement(767149..769443) Nitrosomonas sp. Is79A3 10932789 YP_004693984.1 CDS Nit79A3_0706 NC_015731.1 769646 770575 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: nit:NAL212_1754 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase complement(769646..770575) Nitrosomonas sp. Is79A3 10932790 YP_004693985.1 CDS Nit79A3_0707 NC_015731.1 770796 771212 R PFAM: RDD; KEGG: nit:NAL212_1753 RDD domain containing protein; RDD domain containing protein complement(770796..771212) Nitrosomonas sp. Is79A3 10932791 YP_004693986.1 CDS Nit79A3_0708 NC_015731.1 771507 772202 D KEGG: nit:NAL212_1752 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein; TonB family protein 771507..772202 Nitrosomonas sp. Is79A3 10932792 YP_004693987.1 CDS Nit79A3_0709 NC_015731.1 772206 772964 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: nit:NAL212_1751 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 772206..772964 Nitrosomonas sp. Is79A3 10932793 YP_004693988.1 CDS Nit79A3_0710 NC_015731.1 772964 773383 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: nit:NAL212_1750 biopolymer transport protein ExbD/TolR; Biopolymer transport protein ExbD/TolR 772964..773383 Nitrosomonas sp. Is79A3 10932794 YP_004693989.1 CDS Nit79A3_0711 NC_015731.1 773983 774207 D PFAM: BFD-like [2Fe-2S]-binding region; KEGG: nit:NAL212_1603 BFD domain-containing protein (2Fe-2S)-binding domain-containing protein; BFD domain-containing protein (2Fe-2S)-binding domain-containing protein 773983..774207 Nitrosomonas sp. Is79A3 10932795 YP_004693990.1 CDS Nit79A3_0712 NC_015731.1 774510 776909 D KEGG: nit:NAL212_1604 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent siderophore receptor 774510..776909 Nitrosomonas sp. Is79A3 10932796 YP_004693991.1 CDS Nit79A3_0713 NC_015731.1 777013 779283 D KEGG: nit:NAL212_1605 hypothetical protein; hypothetical protein 777013..779283 Nitrosomonas sp. Is79A3 10932797 YP_004693992.1 CDS Nit79A3_0714 NC_015731.1 779544 780629 D PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; KEGG: tgu:100223630 similar to hephaestin; multicopper oxidase type 2 779544..780629 Nitrosomonas sp. Is79A3 10932798 YP_004693993.1 CDS Nit79A3_0715 NC_015731.1 780704 781303 R PFAM: Haemolysin-type calcium-binding region; KEGG: nit:NAL212_1036 hemolysin-type calcium-binding toxin; Hemolysin-type calcium-binding protein complement(780704..781303) Nitrosomonas sp. Is79A3 10932799 YP_004693994.1 CDS Nit79A3_0716 NC_015731.1 781458 783017 D KEGG: nit:NAL212_1037 cytidyltransferase-related domain-containing protein; TIGRFAM: Cytidyltransferase-related; PFAM: Cytidylyltransferase; LicD-like; cytidyltransferase-related domain-containing protein 781458..783017 Nitrosomonas sp. Is79A3 10932800 YP_004693995.1 CDS Nit79A3_0718 NC_015731.1 784440 786269 R TIGRFAM: PAS; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold; Helix-turn-helix, Fis-type; KEGG: azc:AZC_0759 transcriptional regulator; SMART: ATPase, AAA+ type, core; PAS; Fis family transcriptional regulator complement(784440..786269) Nitrosomonas sp. Is79A3 10932802 YP_004693996.1 CDS Nit79A3_0719 NC_015731.1 786557 788263 D KEGG: nit:NAL212_1516 hypothetical protein; hypothetical protein 786557..788263 Nitrosomonas sp. Is79A3 10932803 YP_004693997.1 CDS Nit79A3_0720 NC_015731.1 788383 789102 D KEGG: nit:NAL212_2582 cytochrome c class I; cytochrome c class I 788383..789102 Nitrosomonas sp. Is79A3 10932804 YP_004693998.1 CDS Nit79A3_0721 NC_015731.1 789099 790391 D PFAM: Cytochrome c, class I; KEGG: nit:NAL212_2581 gluconate 2-dehydrogenase (acceptor); cytochrome c class I 789099..790391 Nitrosomonas sp. Is79A3 10932805 YP_004693999.1 CDS Nit79A3_0723 NC_015731.1 790657 791814 R KEGG: nit:NAL212_1790 peptidase S1 and S6 chymotrypsin/Hap; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF; peptidase S1 and S6 chymotrypsin/Hap complement(790657..791814) Nitrosomonas sp. Is79A3 10932807 YP_004694000.1 CDS Nit79A3_0724 NC_015731.1 791842 792273 R KEGG: nit:NAL212_1789 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin complement(791842..792273) Nitrosomonas sp. Is79A3 10932808 YP_004694001.1 CDS Nit79A3_0725 NC_015731.1 792317 792634 R KEGG: nit:NAL212_1788 MerR family transcriptional regulator; MerR family transcriptional regulator complement(792317..792634) Nitrosomonas sp. Is79A3 10932809 YP_004694002.1 CDS Nit79A3_0726 NC_015731.1 792638 793585 R KEGG: nit:NAL212_1787 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; Chaperone DnaJ, C-terminal; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ complement(792638..793585) Nitrosomonas sp. Is79A3 10932810 YP_004694003.1 CDS Nit79A3_0727 NC_015731.1 793753 794925 R PFAM: Protein of unknown function DUF839, bacterial; KEGG: nit:NAL212_0846 hypothetical protein; hypothetical protein complement(793753..794925) Nitrosomonas sp. Is79A3 10932811 YP_004694004.1 CDS Nit79A3_0728 NC_015731.1 795146 795532 D KEGG: nit:NAL212_0845 ABC drug efflux pump, inner membrane subunit, DrrB family; multidrug ABC transporter permease 795146..795532 Nitrosomonas sp. Is79A3 10932812 YP_004694005.1 CDS Nit79A3_0729 NC_015731.1 795736 796263 R KEGG: meh:M301_2279 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(795736..796263) Nitrosomonas sp. Is79A3 10932813 YP_004694006.1 CDS Nit79A3_0730 NC_015731.1 796870 798822 R PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; KEGG: sur:STAUR_6102 multicopper oxidase; multicopper oxidase type 3 complement(796870..798822) Nitrosomonas sp. Is79A3 10932814 YP_004694007.1 CDS Nit79A3_0731 NC_015731.1 799052 800023 R PFAM: Metal-dependent hydrolase HDOD; KEGG: nit:NAL212_0843 metal dependent phosphohydrolase; signal transduction protein complement(799052..800023) Nitrosomonas sp. Is79A3 10932815 YP_004694008.1 CDS Nit79A3_0732 NC_015731.1 800555 802174 R PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; KEGG: nit:NAL212_2028 bilirubin oxidase; multicopper oxidase type 3 complement(800555..802174) Nitrosomonas sp. Is79A3 10932816 YP_004694009.1 CDS Nit79A3_0734 NC_015731.1 803017 803979 R PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein complement(803017..803979) Nitrosomonas sp. Is79A3 10932818 YP_004694010.1 CDS Nit79A3_0735 NC_015731.1 803992 804687 D manually curated; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: mgm:Mmc1_3408 response regulator receiver modulated metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 803992..804687 Nitrosomonas sp. Is79A3 10932819 YP_004694011.1 CDS Nit79A3_0736 NC_015731.1 804696 805781 R PFAM: aminopeptidase; KEGG: nit:NAL212_1614 aminopeptidase; aminopeptidase complement(804696..805781) Nitrosomonas sp. Is79A3 10932820 YP_004694012.1 CDS Nit79A3_0737 NC_015731.1 806161 806511 D KEGG: nit:NAL212_0951 hypothetical protein; hypothetical protein 806161..806511 Nitrosomonas sp. Is79A3 10932821 YP_004694013.1 CDS Nit79A3_0738 NC_015731.1 806603 808678 R KEGG: nit:NAL212_0950 hypothetical protein; hypothetical protein complement(806603..808678) Nitrosomonas sp. Is79A3 10932822 YP_004694014.1 CDS Nit79A3_0739 NC_015731.1 808900 810168 D PFAM: Outer membrane efflux protein; KEGG: nit:NAL212_0949 outer membrane efflux protein; outer membrane efflux protein 808900..810168 Nitrosomonas sp. Is79A3 10932823 YP_004694015.1 CDS Nit79A3_0740 NC_015731.1 810165 811319 D KEGG: nit:NAL212_0948 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 810165..811319 Nitrosomonas sp. Is79A3 10932824 YP_004694016.1 CDS Nit79A3_0741 NC_015731.1 811323 814508 D KEGG: nit:NAL212_0947 heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; CzcA family heavy metal efflux pump 811323..814508 Nitrosomonas sp. Is79A3 10932825 YP_004694017.1 CDS Nit79A3_0742 NC_015731.1 814610 815869 R PFAM: Protein of unknown function DUF1504; KEGG: pna:Pnap_2982 hypothetical protein; hypothetical protein complement(814610..815869) Nitrosomonas sp. Is79A3 10932826 YP_004694018.1 CDS Nit79A3_0743 NC_015731.1 815984 816712 R PFAM: Protein of unknown function DUF1499; KEGG: nit:NAL212_1958 hypothetical protein; hypothetical protein complement(815984..816712) Nitrosomonas sp. Is79A3 10932827 YP_004694019.1 CDS Nit79A3_0744 NC_015731.1 816962 818668 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Diverse 7TM receptor, transmembrane region; Diverse 7TM receptor, extracellular region 2; KEGG: nit:NAL212_1843 periplasmic/7TM domain sensor diguanylate cyclase; SMART: Diguanylate cyclase, predicted; periplasmic/7TM domain sensor diguanylate cyclase 816962..818668 Nitrosomonas sp. Is79A3 10932828 YP_004694020.1 CDS Nit79A3_0745 NC_015731.1 818685 818879 R KEGG: nit:NAL212_1844 hypothetical protein; hypothetical protein complement(818685..818879) Nitrosomonas sp. Is79A3 10932829 YP_004694021.1 CDS Nit79A3_0746 NC_015731.1 818933 819094 D hypothetical protein 818933..819094 Nitrosomonas sp. Is79A3 10932830 YP_004694022.1 CDS Nit79A3_0747 NC_015731.1 819300 819779 D KEGG: ccb:Clocel_2288 hypothetical protein; hypothetical protein 819300..819779 Nitrosomonas sp. Is79A3 10932831 YP_004694023.1 CDS Nit79A3_0748 NC_015731.1 820066 822930 R PFAM: Sulphatase-modifying factor; MTH538 TIR-like domain; KEGG: app:CAP2UW1_2320 hypothetical protein; sulfatase-modifying factor protein complement(820066..822930) Nitrosomonas sp. Is79A3 10932832 YP_004694024.1 CDS Nit79A3_0750 NC_015731.1 823193 823807 R KEGG: neu:NE2470 NUDIX hydrolase; TIGRFAM: Nucleoside diphosphate pyrophosphatase; PFAM: NUDIX hydrolase domain; nucleoside diphosphate pyrophosphatase complement(823193..823807) Nitrosomonas sp. Is79A3 10932834 YP_004694025.1 CDS Nit79A3_0751 NC_015731.1 823868 824104 R KEGG: nit:NAL212_2552 hypothetical protein; hypothetical protein complement(823868..824104) Nitrosomonas sp. Is79A3 10932835 YP_004694026.1 CDS Nit79A3_0752 NC_015731.1 824319 824435 D hypothetical protein 824319..824435 Nitrosomonas sp. Is79A3 10932836 YP_004694027.1 CDS Nit79A3_0753 NC_015731.1 824478 824909 R KEGG: nit:NAL212_1927 hypothetical protein; hypothetical protein complement(824478..824909) Nitrosomonas sp. Is79A3 10932837 YP_004694028.1 CDS Nit79A3_0754 NC_015731.1 825294 826349 R PFAM: Di-haem cytochrome c peroxidase; KEGG: net:Neut_1521 cytochrome-c peroxidase; Di-heme cytochrome c peroxidase complement(825294..826349) Nitrosomonas sp. Is79A3 10932838 YP_004694029.1 CDS Nit79A3_0755 NC_015731.1 826507 828753 R TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; GAF; KEGG: nit:NAL212_2868 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; GAF and PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(826507..828753) Nitrosomonas sp. Is79A3 10932839 YP_004694030.1 CDS Nit79A3_0756 NC_015731.1 829129 831030 R KEGG: nmu:Nmul_A0201 K+ potassium transporter; HAMAP: Low affinity potassium transport system protein kup; PFAM: K+ potassium transporter; Low affinity potassium transport system protein kup complement(829129..831030) Nitrosomonas sp. Is79A3 10932840 YP_004694031.1 CDS Nit79A3_0757 NC_015731.1 831156 832160 R KEGG: nit:NAL212_1935 kelch repeat type 1-containing protein; PFAM: Kelch repeat type 1; SMART: Kelch repeat type 1; Kelch repeat type 1-containing protein complement(831156..832160) Nitrosomonas sp. Is79A3 10932841 YP_004694032.1 CDS Nit79A3_0758 NC_015731.1 832473 833381 D PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG: nit:NAL212_1241 NAD-dependent epimerase/dehydratase; hypothetical protein 832473..833381 Nitrosomonas sp. Is79A3 10932842 YP_004694033.1 CDS Nit79A3_0759 NC_015731.1 833865 835502 D PFAM: Amidohydrolase 3; KEGG: mei:Msip34_2683 amidohydrolase 3; amidohydrolase 833865..835502 Nitrosomonas sp. Is79A3 10932843 YP_004694034.1 CDS Nit79A3_0760 NC_015731.1 835505 837136 D KEGG: mep:MPQ_2622 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF894, DitE; hypothetical protein 835505..837136 Nitrosomonas sp. Is79A3 10932844 YP_004694035.1 CDS Nit79A3_0761 NC_015731.1 837284 838153 D PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: neu:NE2144 hypothetical protein; pirin 837284..838153 Nitrosomonas sp. Is79A3 10932845 YP_004694036.1 CDS Nit79A3_0762 NC_015731.1 838223 838849 D PFAM: Isochorismatase-like; KEGG: cti:RALTA_A0684 isochorismatase hydrolase; isochorismatase hydrolase 838223..838849 Nitrosomonas sp. Is79A3 10932846 YP_004694037.1 CDS Nit79A3_0763 NC_015731.1 839018 839818 D SMART: Beta-propeller repeat TECPR; KEGG: met:M446_1014 hypothetical protein; beta-propeller repeat TECPR 839018..839818 Nitrosomonas sp. Is79A3 10932847 YP_004694038.1 CDS Nit79A3_0764 NC_015731.1 839851 840063 D KEGG: bxe:Bxe_A2479 cytoplasmic protein; cytoplasmic protein 839851..840063 Nitrosomonas sp. Is79A3 10932848 YP_004694039.1 CDS Nit79A3_0765 NC_015731.1 840245 841099 D KEGG: nit:NAL212_2650 RIO-like kinase; PFAM: RIO-like kinase; SMART: RIO kinase; RIO-like kinase 840245..841099 Nitrosomonas sp. Is79A3 10932849 YP_004694040.1 CDS Nit79A3_0766 NC_015731.1 841271 841513 R hypothetical protein complement(841271..841513) Nitrosomonas sp. Is79A3 10932850 YP_004694041.1 CDS Nit79A3_0767 NC_015731.1 841711 842709 R KEGG: neu:NE0744 hypothetical protein; hypothetical protein complement(841711..842709) Nitrosomonas sp. Is79A3 10932851 YP_004694042.1 CDS Nit79A3_0768 NC_015731.1 842779 843420 R KEGG: tmz:Tmz1t_0436 hypothetical protein; hypothetical protein complement(842779..843420) Nitrosomonas sp. Is79A3 10932852 YP_004694043.1 CDS Nit79A3_0769 NC_015731.1 843735 844685 R KEGG: nit:NAL212_1926 response regulator receiver modulated CheW protein; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver region; response regulator receiver modulated CheW protein complement(843735..844685) Nitrosomonas sp. Is79A3 10932853 YP_004694044.1 CDS Nit79A3_0770 NC_015731.1 844771 844893 D hypothetical protein 844771..844893 Nitrosomonas sp. Is79A3 10932854 YP_004694045.1 CDS Nit79A3_0771 NC_015731.1 844967 846235 R KEGG: nit:NAL212_1189 diguanylate phosphodiesterase metal dependent hydrolase domain; PFAM: Diguanylate phosphodiesterase, predicted; Metal-dependent hydrolase HDOD; SMART: Diguanylate phosphodiesterase, predicted; diguanylate phosphodiesterase with metal dependent hydrolase domain complement(844967..846235) Nitrosomonas sp. Is79A3 10932855 YP_004694046.1 CDS Nit79A3_0772 NC_015731.1 846609 847541 D KEGG: nit:NAL212_1190 abortive infection protein; abortive infection protein 846609..847541 Nitrosomonas sp. Is79A3 10932856 YP_004694047.1 CDS Nit79A3_0773 NC_015731.1 847714 848424 D PFAM: Phosphoadenosine phosphosulphate reductase; KEGG: nit:NAL212_2199 phosphoadenylyl-sulfate reductase (thioredoxin); phosphoadenosine phosphosulfate reductase 847714..848424 Nitrosomonas sp. Is79A3 10932857 YP_004694048.1 CDS Nit79A3_0774 NC_015731.1 848485 849447 R KEGG: nit:NAL212_2198 proline iminopeptidase; TIGRFAM: Peptidase S33, proline iminopeptidase 1; PFAM: Alpha/beta hydrolase fold-1; proline iminopeptidase complement(848485..849447) Nitrosomonas sp. Is79A3 10932858 YP_004694049.1 CDS Nit79A3_0775 NC_015731.1 849598 849855 D KEGG: nit:NAL212_2197 hypothetical protein; hypothetical protein 849598..849855 Nitrosomonas sp. Is79A3 10932859 YP_004694050.1 CDS Nit79A3_0776 NC_015731.1 849848 851017 D PFAM: Patatin; KEGG: nit:NAL212_2196 patatin; Patatin 849848..851017 Nitrosomonas sp. Is79A3 10932860 YP_004694051.1 CDS Nit79A3_0777 NC_015731.1 851070 851789 D KEGG: nit:NAL212_2195 integral membrane protein, YjbE family; TIGRFAM: integral membrane protein, YjbE family; PFAM: Integral membrane protein TerC; integral membrane protein, YjbE family 851070..851789 Nitrosomonas sp. Is79A3 10932861 YP_004694052.1 CDS Nit79A3_0778 NC_015731.1 851822 852247 D PFAM: UspA; KEGG: nit:NAL212_2194 UspA domain-containing protein; UspA domain-containing protein 851822..852247 Nitrosomonas sp. Is79A3 10932862 YP_004694053.1 CDS Nit79A3_0779 NC_015731.1 852269 853033 D KEGG: nit:NAL212_2193 cyclic-AMP phosphodiesterase; cyclic-AMP phosphodiesterase 852269..853033 Nitrosomonas sp. Is79A3 10932863 YP_004694054.1 CDS Nit79A3_0780 NC_015731.1 853055 855439 D KEGG: nit:NAL212_2192 phytochrome sensor protein; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: GAF; phytochrome sensor protein 853055..855439 Nitrosomonas sp. Is79A3 10932864 YP_004694055.1 CDS Nit79A3_0781 NC_015731.1 855840 856274 R KEGG: gca:Galf_2551 pilus biogenesis protein TapA precursor; pilus biogenesis protein TapA complement(855840..856274) Nitrosomonas sp. Is79A3 10932865 YP_004694056.1 CDS Nit79A3_0782 NC_015731.1 856479 859268 R KEGG: nit:NAL212_2189 (glutamate--ammonia-ligase) adenylyltransferase; HAMAP: Glutamate-ammonia-ligase adenylyltransferase; PFAM: Glutamate-ammonia ligase adenylyltransferase; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; Glutamate-ammonia-ligase adenylyltransferase complement(856479..859268) Nitrosomonas sp. Is79A3 10932866 YP_004694057.1 CDS Nit79A3_0783 NC_015731.1 859509 860372 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: nit:NAL212_2187 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 859509..860372 Nitrosomonas sp. Is79A3 10932867 YP_004694058.1 CDS Nit79A3_0784 NC_015731.1 860599 862071 D PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: nit:NAL212_2186 peptidase U62 modulator of DNA gyrase; peptidase U62 860599..862071 Nitrosomonas sp. Is79A3 10932868 YP_004694059.1 CDS Nit79A3_0785 NC_015731.1 862144 863847 D KEGG: nit:NAL212_2185 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; acetolactate synthase, large subunit, biosynthetic type 862144..863847 Nitrosomonas sp. Is79A3 10932869 YP_004694060.1 CDS Nit79A3_0786 NC_015731.1 863855 864346 D manually curated; TIGRFAM: Acetolactate synthase, small subunit; KEGG: nit:NAL212_2184 acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; acetolactate synthase, small subunit 863855..864346 Nitrosomonas sp. Is79A3 10932870 YP_004694061.1 CDS Nit79A3_0787 NC_015731.1 864467 865483 D TIGRFAM: Acetohydroxy acid isomeroreductase; HAMAP: Ketol-acid reductoisomerase; KEGG: nit:NAL212_2183 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal; Ketol-acid reductoisomerase 864467..865483 Nitrosomonas sp. Is79A3 10932871 YP_004694062.1 CDS Nit79A3_0788 NC_015731.1 865555 866220 D TIGRFAM: Phosphatidylserine decarboxylase-related protein; HAMAP: Phosphatidylserine decarboxylase proenzyme; KEGG: nit:NAL212_2182 phosphatidylserine decarboxylase-like protein; PFAM: Phosphatidylserine decarboxylase-related; Phosphatidylserine decarboxylase proenzyme 865555..866220 Nitrosomonas sp. Is79A3 10932872 YP_004694063.1 CDS Nit79A3_0789 NC_015731.1 866375 867148 D KEGG: nit:NAL212_2181 CDP-diacylglycerol/serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase 866375..867148 Nitrosomonas sp. Is79A3 10932873 YP_004694064.1 CDS Nit79A3_0790 NC_015731.1 867377 868909 D KEGG: nit:NAL212_2180 2-isopropylmalate synthase; TIGRFAM: Bacterial 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; 2-isopropylmalate synthase 867377..868909 Nitrosomonas sp. Is79A3 10932874 YP_004694065.1 CDS Nit79A3_0791 NC_015731.1 868962 869447 D PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: nit:NAL212_2179 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 868962..869447 Nitrosomonas sp. Is79A3 10932875 YP_004694066.1 CDS Nit79A3_0792 NC_015731.1 869505 870095 R PFAM: Lytic transglycosylase-like, catalytic; KEGG: nit:NAL212_2178 lytic transglycosylase catalytic; lytic transglycosylase complement(869505..870095) Nitrosomonas sp. Is79A3 10932876 YP_004694067.1 CDS Nit79A3_0793 NC_015731.1 870083 871792 R TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; HAMAP: Prolyl-tRNA synthetase; KEGG: nit:NAL212_2177 prolyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; YbaK/aminoacyl-tRNA synthetase associated region; Anticodon-binding; prolyl-tRNA synthetase complement(870083..871792) Nitrosomonas sp. Is79A3 10932877 YP_004694068.1 CDS Nit79A3_0794 NC_015731.1 872002 872562 D KEGG: nit:NAL212_2176 NUDIX hydrolase; HAMAP: RNA pyrophosphohydrolase; PFAM: NUDIX hydrolase domain; RNA pyrophosphohydrolase 872002..872562 Nitrosomonas sp. Is79A3 10932878 YP_004694069.1 CDS Nit79A3_0795 NC_015731.1 872744 873736 D PFAM: Di-haem cytochrome c peroxidase; KEGG: nit:NAL212_2175 cytochrome-c peroxidase; Di-heme cytochrome c peroxidase 872744..873736 Nitrosomonas sp. Is79A3 10932879 YP_004694070.1 CDS Nit79A3_0796 NC_015731.1 873984 874229 D TIGRFAM: Host factor Hfq; HAMAP: Protein hfq; KEGG: nit:NAL212_2174 RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein, core; Protein hfq 873984..874229 Nitrosomonas sp. Is79A3 10932880 YP_004694071.1 CDS Nit79A3_0797 NC_015731.1 874229 875416 D KEGG: nit:NAL212_2173 GTP-binding proten HflX; TIGRFAM: GTP-binding protein, HflX; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein HflX 874229..875416 Nitrosomonas sp. Is79A3 10932881 YP_004694072.1 CDS Nit79A3_0798 NC_015731.1 875438 876616 D TIGRFAM: HflK; PFAM: Band 7 protein; KEGG: nit:NAL212_2172 HflK protein; SMART: Band 7 protein; HflK protein 875438..876616 Nitrosomonas sp. Is79A3 10932882 YP_004694073.1 CDS Nit79A3_0799 NC_015731.1 876617 877492 D TIGRFAM: HflC; PFAM: Band 7 protein; KEGG: nit:NAL212_2171 HflC protein; SMART: Band 7 protein; HflC protein 876617..877492 Nitrosomonas sp. Is79A3 10932883 YP_004694074.1 CDS Nit79A3_0800 NC_015731.1 877742 877927 D PFAM: Protein of unknown function DUF2065; KEGG: nit:NAL212_2170 hypothetical protein; hypothetical protein 877742..877927 Nitrosomonas sp. Is79A3 10932884 YP_004694075.1 CDS Nit79A3_0801 NC_015731.1 877974 879125 D TIGRFAM: Histidyl-tRNA synthetase, class IIa, HAMAP: ATP phosphoribosyltransferase regulatory subunit; KEGG: nit:NAL212_2169 histidyl-tRNA synthetase 2; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; ATP phosphoribosyltransferase 877974..879125 Nitrosomonas sp. Is79A3 10932885 YP_004694076.1 CDS Nit79A3_0802 NC_015731.1 879161 880456 D SMART: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; KEGG: nit:NAL212_2168 adenylosuccinate synthetase; HAMAP: Adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; adenylosuccinate synthetase 879161..880456 Nitrosomonas sp. Is79A3 10932886 YP_004694077.1 CDS Nit79A3_0803 NC_015731.1 880502 880939 D PFAM: GCN5-related N-acetyltransferase; KEGG: nit:NAL212_2167 GCN5-like N-acetyltransferase; GCN5-like N-acetyltransferase 880502..880939 Nitrosomonas sp. Is79A3 10932887 YP_004694078.1 CDS Nit79A3_0804 NC_015731.1 880946 881332 R hypothetical protein complement(880946..881332) Nitrosomonas sp. Is79A3 10932888 YP_004694079.1 CDS Nit79A3_0805 NC_015731.1 881674 882054 D KEGG: nit:NAL212_1809 hypothetical protein; hypothetical protein 881674..882054 Nitrosomonas sp. Is79A3 10932889 YP_004694080.1 CDS Nit79A3_0806 NC_015731.1 882209 882472 D TIGRFAM: Ribosomal protein S20; HAMAP: Ribosomal protein S20; KEGG: nit:NAL212_1808 30S ribosomal protein S20; PFAM: Ribosomal protein S20; 30S ribosomal protein S20 882209..882472 Nitrosomonas sp. Is79A3 10932890 YP_004694081.1 CDS Nit79A3_0807 NC_015731.1 882747 884459 D KEGG: nit:NAL212_2750 hydroxylamine oxidase; hydroxylamine oxidase 882747..884459 Nitrosomonas sp. Is79A3 10932891 YP_004694082.1 CDS Nit79A3_0808 NC_015731.1 884456 885490 D KEGG: nit:NAL212_2749 hypothetical protein; hypothetical protein 884456..885490 Nitrosomonas sp. Is79A3 10932892 YP_004694083.1 CDS Nit79A3_0809 NC_015731.1 885650 886369 D KEGG: nit:NAL212_2748 cytochrome c-554; cytochrome c-554 885650..886369 Nitrosomonas sp. Is79A3 10932893 YP_004694084.1 CDS Nit79A3_0810 NC_015731.1 886369 887043 D PFAM: NapC/NirT cytochrome c, N-terminal; KEGG: nit:NAL212_2747 NapC/NirT cytochrome c domain-containing protein; NapC/NirT cytochrome c domain-containing protein 886369..887043 Nitrosomonas sp. Is79A3 10932894 YP_004694085.1 CDS Nit79A3_0811 NC_015731.1 887266 888747 D KEGG: nit:NAL212_1803 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 887266..888747 Nitrosomonas sp. Is79A3 10932895 YP_004694086.1 CDS Nit79A3_0812 NC_015731.1 889085 890398 D PFAM: Transposase, IS4-like; KEGG: gur:Gura_1234 hypothetical protein; transposase IS4 family protein 889085..890398 Nitrosomonas sp. Is79A3 10932896 YP_004694087.1 CDS Nit79A3_0813 NC_015731.1 891066 892256 D KEGG: nit:NAL212_2147 translation elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; translation elongation factor Tu 891066..892256 Nitrosomonas sp. Is79A3 10932900 YP_004694088.1 CDS Nit79A3_0814 NC_015731.1 892702 893046 D KEGG: nit:NAL212_2146 preprotein translocase, SecE subunit; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein secE/sec61-gamma protein; preprotein translocase subunit SecE 892702..893046 Nitrosomonas sp. Is79A3 10932902 YP_004694089.1 CDS Nit79A3_0815 NC_015731.1 893068 893601 D TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; KEGG: nit:NAL212_2145 NusG antitermination factor; SMART: Transcription antitermination protein, NusG, N-terminal; KOW; NusG antitermination factor 893068..893601 Nitrosomonas sp. Is79A3 10932903 YP_004694090.1 CDS Nit79A3_0816 NC_015731.1 893726 894157 D TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, N-terminal; Ribosomal protein L11, C-terminal; KEGG: nit:NAL212_2144 50S ribosomal protein L11; SMART: Ribosomal protein L11; 50S ribosomal protein L11 893726..894157 Nitrosomonas sp. Is79A3 10932904 YP_004694091.1 CDS Nit79A3_0817 NC_015731.1 894159 894851 D KEGG: nit:NAL212_2143 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1; 50S ribosomal protein L1 894159..894851 Nitrosomonas sp. Is79A3 10932905 YP_004694092.1 CDS Nit79A3_0818 NC_015731.1 895170 895685 D KEGG: nit:NAL212_2142 50S ribosomal protein L10; HAMAP: 50S ribosomal protein L10; PFAM: Ribosomal protein L10; 50S ribosomal protein L10 895170..895685 Nitrosomonas sp. Is79A3 10932906 YP_004694093.1 CDS Nit79A3_0819 NC_015731.1 895750 896130 D TIGRFAM: Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; KEGG: nit:NAL212_2141 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; 50S ribosomal protein L7/L12 895750..896130 Nitrosomonas sp. Is79A3 10932907 YP_004694094.1 CDS Nit79A3_0820 NC_015731.1 896285 900358 D TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; HAMAP: DNA-directed RNA polymerase subunit beta; KEGG: nit:NAL212_2140 DNA-directed RNA polymerase, beta subunit; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase, beta subunit, protrusion; RNA polymerase Rpb2, domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7; DNA-directed RNA polymerase subunit beta 896285..900358 Nitrosomonas sp. Is79A3 10932908 YP_004694095.1 CDS Nit79A3_0821 NC_015731.1 900461 904663 D SMART: RNA polymerase, N-terminal; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; KEGG: nit:NAL212_2139 DNA-directed RNA polymerase, beta' subunit; HAMAP: DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; DNA-directed RNA polymerase subunit beta' 900461..904663 Nitrosomonas sp. Is79A3 10932909 YP_004694096.1 CDS Nit79A3_0822 NC_015731.1 904896 906608 D KEGG: nit:NAL212_2750 hydroxylamine oxidase; hydroxylamine oxidase 904896..906608 Nitrosomonas sp. Is79A3 10932910 YP_004694097.1 CDS Nit79A3_0823 NC_015731.1 906605 907639 D KEGG: nit:NAL212_2749 hypothetical protein; hypothetical protein 906605..907639 Nitrosomonas sp. Is79A3 10932911 YP_004694098.1 CDS Nit79A3_0824 NC_015731.1 907799 908518 D KEGG: nit:NAL212_2748 cytochrome c-554; cytochrome c-554 907799..908518 Nitrosomonas sp. Is79A3 10932912 YP_004694099.1 CDS Nit79A3_0825 NC_015731.1 908518 909192 D PFAM: NapC/NirT cytochrome c, N-terminal; KEGG: nit:NAL212_2747 NapC/NirT cytochrome c domain-containing protein; NapC/NirT cytochrome c domain-containing protein 908518..909192 Nitrosomonas sp. Is79A3 10932913 YP_004694100.1 CDS Nit79A3_0826 NC_015731.1 909344 910099 D KEGG: nit:NAL212_2134 hypothetical protein; hypothetical protein 909344..910099 Nitrosomonas sp. Is79A3 10932914 YP_004694101.1 CDS Nit79A3_0827 NC_015731.1 910188 912095 D KEGG: nit:NAL212_2133 threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; threonyl-tRNA synthetase 910188..912095 Nitrosomonas sp. Is79A3 10932915 YP_004694102.1 CDS Nit79A3_0828 NC_015731.1 912151 912705 D TIGRFAM: Translation initiation factor 3; HAMAP: Translation initiation factor IF-3; KEGG: nit:NAL212_2132 translation initiation factor IF-3; PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; Translation initiation factor IF-3 912151..912705 Nitrosomonas sp. Is79A3 10932916 YP_004694103.1 CDS Nit79A3_0829 NC_015731.1 912826 913023 D TIGRFAM: Ribosomal protein L35; HAMAP: Ribosomal protein L35; KEGG: nit:NAL212_2131 50S ribosomal protein L35; PFAM: Ribosomal protein L35; 50S ribosomal protein L35 912826..913023 Nitrosomonas sp. Is79A3 10932917 YP_004694104.1 CDS Nit79A3_0830 NC_015731.1 913036 913395 D TIGRFAM: Ribosomal protein L20; HAMAP: Ribosomal protein L20; KEGG: nit:NAL212_2130 50S ribosomal protein L20; PFAM: Ribosomal protein L20; 50S ribosomal protein L20 913036..913395 Nitrosomonas sp. Is79A3 10932918 YP_004694105.1 CDS Nit79A3_0831 NC_015731.1 913506 914525 D TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain; KEGG: nit:NAL212_2129 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal; phenylalanyl-tRNA synthetase subunit alpha 913506..914525 Nitrosomonas sp. Is79A3 10932919 YP_004694106.1 CDS Nit79A3_0832 NC_015731.1 914567 916939 D TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: nit:NAL212_2128 phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta 914567..916939 Nitrosomonas sp. Is79A3 10932920 YP_004694107.1 CDS Nit79A3_0833 NC_015731.1 917125 917433 D SMART: Histone-like bacterial DNA-binding protein; TIGRFAM: Integration host factor, alpha subunit; KEGG: nit:NAL212_2127 integration host factor, alpha subunit; HAMAP: Integration host factor, alpha subunit; PFAM: Histone-like bacterial DNA-binding protein; Integration host factor subunit alpha 917125..917433 Nitrosomonas sp. Is79A3 10932921 YP_004694108.1 CDS Nit79A3_0834 NC_015731.1 917411 917791 D KEGG: nit:NAL212_2126 regulatory protein MerR; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MarR family transcriptional regulator 917411..917791 Nitrosomonas sp. Is79A3 10932922 YP_004694109.1 CDS Nit79A3_0835 NC_015731.1 918024 918767 D TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; HAMAP: Multifunctional protein surE; KEGG: nit:NAL212_2125 stationary-phase survival protein SurE; PFAM: Survival protein SurE-like phosphatase/nucleotidase; Multifunctional protein surE 918024..918767 Nitrosomonas sp. Is79A3 10932924 YP_004694110.1 CDS Nit79A3_0836 NC_015731.1 918845 919480 D TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; HAMAP: Protein-L-isoaspartate O-methyltransferase; KEGG: nit:NAL212_2124 protein-L-isoaspartate O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; Protein-L-isoaspartate O-methyltransferase 918845..919480 Nitrosomonas sp. Is79A3 10932925 YP_004694111.1 CDS Nit79A3_0837 NC_015731.1 919500 920576 D KEGG: nit:NAL212_2123 peptidase M23; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; peptidase M23 919500..920576 Nitrosomonas sp. Is79A3 10932926 YP_004694112.1 CDS Nit79A3_0838 NC_015731.1 920655 921011 R KEGG: nmu:Nmul_A2165 hypothetical protein; hypothetical protein complement(920655..921011) Nitrosomonas sp. Is79A3 10932927 YP_004694113.1 CDS Nit79A3_0839 NC_015731.1 921516 922742 D PFAM: Aminotransferase, class I/II; KEGG: nit:NAL212_1611 aspartate transaminase; class I and II aminotransferase 921516..922742 Nitrosomonas sp. Is79A3 10932928 YP_004694114.1 CDS Nit79A3_0840 NC_015731.1 922832 924145 D PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT; KEGG: nit:NAL212_1612 homoserine dehydrogenase; homoserine dehydrogenase 922832..924145 Nitrosomonas sp. Is79A3 10932929 YP_004694115.1 CDS Nit79A3_0841 NC_015731.1 924264 925682 D KEGG: nit:NAL212_1613 threonine synthase; TIGRFAM: Threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; threonine synthase 924264..925682 Nitrosomonas sp. Is79A3 10932930 YP_004694116.1 CDS Nit79A3_0842 NC_015731.1 925754 927811 D KEGG: nit:NAL212_2775 hypothetical protein; hypothetical protein 925754..927811 Nitrosomonas sp. Is79A3 10932931 YP_004694117.1 CDS Nit79A3_0843 NC_015731.1 928033 928752 D KEGG: mmb:Mmol_0746 hypothetical protein; hypothetical protein 928033..928752 Nitrosomonas sp. Is79A3 10932932 YP_004694118.1 CDS Nit79A3_0844 NC_015731.1 929095 929289 R KEGG: nit:NAL212_1786 hypothetical protein; hypothetical protein complement(929095..929289) Nitrosomonas sp. Is79A3 10932933 YP_004694119.1 CDS Nit79A3_0845 NC_015731.1 929574 930269 D KEGG: nit:NAL212_1785 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; PFAM: Ferredoxin; succinate dehydrogenase and fumarate reductase iron-sulfur protein 929574..930269 Nitrosomonas sp. Is79A3 10932934 YP_004694120.1 CDS Nit79A3_0846 NC_015731.1 930266 930499 D PFAM: Protein of unknown function DUF339; KEGG: nit:NAL212_1784 hypothetical protein; hypothetical protein 930266..930499 Nitrosomonas sp. Is79A3 10932935 YP_004694121.1 CDS Nit79A3_0847 NC_015731.1 930580 931881 D KEGG: nit:NAL212_1783 citrate synthase I; TIGRFAM: Citrate synthase, type II; PFAM: Citrate synthase-like; citrate synthase I 930580..931881 Nitrosomonas sp. Is79A3 10932936 YP_004694122.1 CDS Nit79A3_0848 NC_015731.1 931909 934749 D KEGG: nit:NAL212_1782 2-oxoglutarate dehydrogenase, E1 subunit; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; 2-oxoglutarate dehydrogenase E1 931909..934749 Nitrosomonas sp. Is79A3 10932937 YP_004694123.1 CDS Nit79A3_0849 NC_015731.1 934762 936021 D KEGG: nit:NAL212_1781 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; TIGRFAM: Dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; 2-oxoglutarate dehydrogenase E2 934762..936021 Nitrosomonas sp. Is79A3 10932938 YP_004694124.1 CDS Nit79A3_0850 NC_015731.1 936153 936665 D PFAM: PEP-CTERM bacterial; KEGG: cps:CPS_4565 hypothetical protein; hypothetical protein 936153..936665 Nitrosomonas sp. Is79A3 10932939 YP_004694125.1 CDS Nit79A3_0851 NC_015731.1 936610 937338 R KEGG: meh:M301_0967 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; Crp/Fnr family transcriptional regulator complement(936610..937338) Nitrosomonas sp. Is79A3 10932940 YP_004694126.1 CDS Nit79A3_0852 NC_015731.1 937363 938187 R TIGRFAM: PAS; PFAM: Signal transduction response regulator, receiver region; KEGG: meh:M301_0966 response regulator receiver protein; SMART: Signal transduction response regulator, receiver region; PAS/PAC sensor protein complement(937363..938187) Nitrosomonas sp. Is79A3 10932941 YP_004694127.1 CDS Nit79A3_0853 NC_015731.1 938177 940309 R TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; PAS fold; Signal transduction response regulator, receiver region; KEGG: sfr:Sfri_1019 PAS/PAC sensor hybrid histidine kinase; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; PAS/PAC sensor hybrid histidine kinase complement(938177..940309) Nitrosomonas sp. Is79A3 10932942 YP_004694128.1 CDS Nit79A3_0854 NC_015731.1 940680 944201 R TIGRFAM: DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: nit:NAL212_1467 DNA polymerase III, alpha subunit; SMART: Polymerase/histidinol phosphatase, N-terminal; DNA polymerase III subunit alpha complement(940680..944201) Nitrosomonas sp. Is79A3 10932943 YP_004694129.1 CDS Nit79A3_0855 NC_015731.1 944293 945312 R PFAM: Alpha/beta hydrolase fold-1; KEGG: nit:NAL212_1469 alpha/beta hydrolase fold protein; alpha/beta hydrolase complement(944293..945312) Nitrosomonas sp. Is79A3 10932944 YP_004694130.1 CDS Nit79A3_0856 NC_015731.1 945473 947206 R TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3; HAMP linker domain; KEGG: nit:NAL212_0245 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; PAS; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor complement(945473..947206) Nitrosomonas sp. Is79A3 10932945 YP_004694131.1 CDS Nit79A3_0857 NC_015731.1 947569 949209 D TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; KEGG: nit:NAL212_1289 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS/PAC sensor signal transduction histidine kinase 947569..949209 Nitrosomonas sp. Is79A3 10932946 YP_004694132.1 CDS Nit79A3_0858 NC_015731.1 949219 949665 D KEGG: nit:NAL212_1290 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 949219..949665 Nitrosomonas sp. Is79A3 10932947 YP_004694133.1 CDS Nit79A3_0859 NC_015731.1 949672 951129 D TIGRFAM: PAS; PFAM: Signal transduction response regulator, receiver region; PAS fold; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; KEGG: nit:NAL212_1291 multi-sensor signal transduction histidine kinase; SMART: Signal transduction response regulator, receiver region; PAS; PAC motif; ATP-binding region, ATPase-like; signal transduction histidine kinase 949672..951129 Nitrosomonas sp. Is79A3 10932948 YP_004694134.1 CDS Nit79A3_0860 NC_015731.1 951122 951754 D KEGG: nit:NAL212_1292 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 951122..951754 Nitrosomonas sp. Is79A3 10932949 YP_004694135.1 CDS Nit79A3_0861 NC_015731.1 951784 952419 R KEGG: net:Neut_1627 esterase/lipase/thioesterase; esterase complement(951784..952419) Nitrosomonas sp. Is79A3 10932950 YP_004694136.1 CDS Nit79A3_0862 NC_015731.1 952442 952750 R KEGG: nit:NAL212_1687 ferredoxin 2Fe-2s protein; ferredoxin 2Fe-2s protein complement(952442..952750) Nitrosomonas sp. Is79A3 10932951 YP_004694137.1 CDS Nit79A3_0863 NC_015731.1 952785 953900 R PFAM: Bacterial extracellular solute-binding, family 1; KEGG: nmu:Nmul_A0979 extracellular solute-binding protein; ABC transporter substrate-binding protein complement(952785..953900) Nitrosomonas sp. Is79A3 10932952 YP_004694138.1 CDS Nit79A3_0864 NC_015731.1 953903 954685 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: neu:NE1872 spermidine/putrescine transport system permease; ABC transporter permease complement(953903..954685) Nitrosomonas sp. Is79A3 10932953 YP_004694139.1 CDS Nit79A3_0865 NC_015731.1 954724 955617 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: nmu:Nmul_A0981 binding-protein dependent transport system inner membrane protein; ABC transporter permease complement(954724..955617) Nitrosomonas sp. Is79A3 10932954 YP_004694140.1 CDS Nit79A3_0866 NC_015731.1 955645 956730 R TIGRFAM: Spermidine/putrescine ABC transporter ATP-binding subunit; PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: nmu:Nmul_A0982 spermidine/putrescine ABC transporter ATP-binding subunit; SMART: ATPase, AAA+ type, core; spermidine/putrescine ABC transporter ATPase complement(955645..956730) Nitrosomonas sp. Is79A3 10932955 YP_004694141.1 CDS Nit79A3_0868 NC_015731.1 957764 958249 D KEGG: psl:Psta_1889 limonene-12-epoxide hydrolase; limonene-12-epoxide hydrolase 957764..958249 Nitrosomonas sp. Is79A3 10932957 YP_004694142.1 CDS Nit79A3_0869 NC_015731.1 958483 959337 D PFAM: Protein of unknown function DUF676, hydrolase-like; KEGG: cbk:CLL_A1759 serine esterase; hypothetical protein 958483..959337 Nitrosomonas sp. Is79A3 10932958 YP_004694143.1 CDS Nit79A3_0870 NC_015731.1 959428 960432 R PFAM: Fatty acid desaturase, type 1; KEGG: net:Neut_1694 fatty acid desaturase; fatty acid desaturase complement(959428..960432) Nitrosomonas sp. Is79A3 10932959 YP_004694144.1 CDS Nit79A3_0871 NC_015731.1 960942 961055 R hypothetical protein complement(960942..961055) Nitrosomonas sp. Is79A3 10932960 YP_004694145.1 CDS Nit79A3_0872 NC_015731.1 961283 962797 R KEGG: nit:NAL212_1686 2-polyprenylphenol 6-hydroxylase; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1; 2-polyprenylphenol 6-hydroxylase complement(961283..962797) Nitrosomonas sp. Is79A3 10932961 YP_004694146.1 CDS Nit79A3_0873 NC_015731.1 962919 963521 R KEGG: nit:NAL212_1685 hypothetical protein; hypothetical protein complement(962919..963521) Nitrosomonas sp. Is79A3 10932962 YP_004694147.1 CDS Nit79A3_0875 NC_015731.1 966943 967932 R KEGG: slt:Slit_2431 filamentation induced by cAMP protein Fic; TIGRFAM: Death-on-curing protein; PFAM: Filamentation induced by cAMP/death on curing, related; death-on-curing family protein complement(966943..967932) Nitrosomonas sp. Is79A3 10932964 YP_004694148.1 CDS Nit79A3_0876 NC_015731.1 968026 968220 R PFAM: Protein of unknown function DUF2191; KEGG: nit:NAL212_2266 hypothetical protein; hypothetical protein complement(968026..968220) Nitrosomonas sp. Is79A3 10932965 YP_004694149.1 CDS Nit79A3_0880 NC_015731.1 970268 970606 R PFAM: Nucleotidyltransferase; KEGG: avn:Avin_07030 nucleotidyltransferase; DNA polymerase beta domain-containing protein complement(970268..970606) Nitrosomonas sp. Is79A3 10932969 YP_004694150.1 CDS Nit79A3_0881 NC_015731.1 970603 971022 R PFAM: Nucleotidyltransferase substrate binding protein, HI0074; KEGG: gur:Gura_2085 hypothetical protein; Nucleotidyltransferase substrate binding protein HI0074 complement(970603..971022) Nitrosomonas sp. Is79A3 10932970 YP_004694151.1 CDS Nit79A3_0882 NC_015731.1 971019 972581 R PFAM: DNA methylase, adenine-specific; KEGG: rfr:Rfer_4006 N-6 DNA methylase; N-6 DNA methylase complement(971019..972581) Nitrosomonas sp. Is79A3 10932971 YP_004694152.1 CDS Nit79A3_0883 NC_015731.1 972666 974105 R TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit; HAMAP: Glutamyl-tRNA(Gln) amidotransferase, B subunit; KEGG: nit:NAL212_0275 glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, central region; Asn/Gln amidotransferase; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(972666..974105) Nitrosomonas sp. Is79A3 10932972 YP_004694153.1 CDS Nit79A3_0884 NC_015731.1 974153 975601 R TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit; HAMAP: Glutamyl-tRNA(Gln) amidotransferase A subunit; KEGG: nit:NAL212_0274 glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; Glutamyl-tRNA(Gln) amidotransferase subunit A complement(974153..975601) Nitrosomonas sp. Is79A3 10932973 YP_004694154.1 CDS Nit79A3_0885 NC_015731.1 975701 975988 R TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; HAMAP: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; KEGG: nit:NAL212_0273 glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit; aspartyl/glutamyl-tRNA amidotransferase subunit C complement(975701..975988) Nitrosomonas sp. Is79A3 10932974 YP_004694155.1 CDS Nit79A3_0886 NC_015731.1 976117 977175 D KEGG: nit:NAL212_0272 cell shape determining protein, MreB/Mrl family; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein 976117..977175 Nitrosomonas sp. Is79A3 10932975 YP_004694156.1 CDS Nit79A3_0887 NC_015731.1 977255 978145 D KEGG: nit:NAL212_0271 rod shape-determining protein MreC; TIGRFAM: Rod shape-determining protein MreC, subtype; PFAM: Rod shape-determining protein MreC; rod shape-determining protein MreC 977255..978145 Nitrosomonas sp. Is79A3 10932976 YP_004694157.1 CDS Nit79A3_0888 NC_015731.1 978126 978677 D KEGG: nit:NAL212_0270 rod shape-determining protein MreD; TIGRFAM: Cell shape-determining protein MreD; PFAM: Cell shape-determining protein MreD; rod shape-determining protein MreD 978126..978677 Nitrosomonas sp. Is79A3 10932977 YP_004694158.1 CDS Nit79A3_0889 NC_015731.1 978674 980587 D KEGG: nit:NAL212_0269 penicillin-binding protein 2; TIGRFAM: Penicillin-binding protein 2; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; penicillin-binding protein 2 978674..980587 Nitrosomonas sp. Is79A3 10932978 YP_004694159.1 CDS Nit79A3_0890 NC_015731.1 980794 981894 D KEGG: nit:NAL212_0268 rod shape-determining protein RodA; TIGRFAM: Rod shape-determining protein RodA; PFAM: Cell cycle protein; rod shape-determining protein RodA 980794..981894 Nitrosomonas sp. Is79A3 10932979 YP_004694160.1 CDS Nit79A3_0891 NC_015731.1 981891 982850 D KEGG: nit:NAL212_0267 rare lipoprotein A; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Rare lipoprotein A; Sporulation/cell division region, bacteria; rare lipoprotein A 981891..982850 Nitrosomonas sp. Is79A3 10932980 YP_004694161.1 CDS Nit79A3_0892 NC_015731.1 983477 984259 R KEGG: nit:NAL212_2121 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase complement(983477..984259) Nitrosomonas sp. Is79A3 10932981 YP_004694162.1 CDS Nit79A3_0893 NC_015731.1 984261 985304 R KEGG: nit:NAL212_2120 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; SUA5; Sua5/YciO/YrdC/YwlC family protein complement(984261..985304) Nitrosomonas sp. Is79A3 10932982 YP_004694163.1 CDS Nit79A3_0894 NC_015731.1 985361 986533 R KEGG: nit:NAL212_2119 phospholipase D/transphosphatidylase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; phospholipase D/Transphosphatidylase complement(985361..986533) Nitrosomonas sp. Is79A3 10932983 YP_004694164.1 CDS Nit79A3_0895 NC_015731.1 986655 987752 R TIGRFAM: Quinolinate synthetase A; HAMAP: Quinolinate synthase A; KEGG: nit:NAL212_2118 quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; Quinolinate synthase A complement(986655..987752) Nitrosomonas sp. Is79A3 10932984 YP_004694165.1 CDS Nit79A3_0896 NC_015731.1 988123 988689 D PFAM: Protein of unknown function DUF1239; KEGG: nit:NAL212_2117 hypothetical protein; hypothetical protein 988123..988689 Nitrosomonas sp. Is79A3 10932985 YP_004694166.1 CDS Nit79A3_0897 NC_015731.1 988686 989216 D KEGG: nit:NAL212_2116 lipopolysaccharide transport periplasmic protein LptA; TIGRFAM: Cell envelope biogenesis YhbN; PFAM: OstA-like protein; lipopolysaccharide transport periplasmic protein LptA 988686..989216 Nitrosomonas sp. Is79A3 10932986 YP_004694167.1 CDS Nit79A3_0898 NC_015731.1 989261 989983 D KEGG: nit:NAL212_2115 sulfate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 989261..989983 Nitrosomonas sp. Is79A3 10932987 YP_004694168.1 CDS Nit79A3_0899 NC_015731.1 990038 991486 D KEGG: nit:NAL212_2114 RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54; RNA polymerase, sigma 54 subunit, RpoN 990038..991486 Nitrosomonas sp. Is79A3 10932988 YP_004694169.1 CDS Nit79A3_0900 NC_015731.1 991506 991835 D KEGG: nit:NAL212_2113 sigma 54 modulation protein/30S ribosomal protein S30EA; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; sigma 54 modulation protein/30S ribosomal protein S30EA 991506..991835 Nitrosomonas sp. Is79A3 10932989 YP_004694170.1 CDS Nit79A3_0901 NC_015731.1 991959 992426 D PFAM: Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; KEGG: nit:NAL212_2112 PTS IIA-like nitrogen-regulatory protein PtsN; PTS IIA-like nitrogen-regulatory protein PtsN 991959..992426 Nitrosomonas sp. Is79A3 10932990 YP_004694171.1 CDS Nit79A3_0902 NC_015731.1 992413 993372 D KEGG: nit:NAL212_2111 HPr kinase; HAMAP: HPr kinase/phosphorylase; PFAM: Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, C-terminal; HPr kinase 992413..993372 Nitrosomonas sp. Is79A3 10932991 YP_004694172.1 CDS Nit79A3_0903 NC_015731.1 993444 994058 D KEGG: nit:NAL212_2110 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: Phenylacrylic acid decarboxylase; PFAM: Flavoprotein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 993444..994058 Nitrosomonas sp. Is79A3 10932992 YP_004694173.1 CDS Nit79A3_0904 NC_015731.1 994275 994892 D PFAM: PEP-CTERM bacterial; KEGG: nit:NAL212_1622 PEP motif anchor domain-containing protein; hypothetical protein 994275..994892 Nitrosomonas sp. Is79A3 10932993 YP_004694174.1 CDS Nit79A3_0905 NC_015731.1 995025 995639 R KEGG: nit:NAL212_2109 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase complement(995025..995639) Nitrosomonas sp. Is79A3 10932994 YP_004694175.1 CDS Nit79A3_0906 NC_015731.1 995645 996730 R TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; KEGG: nit:NAL212_2108 A/G-specific adenine glycosylase; SMART: HhH-GPD domain; A/G-specific adenine glycosylase complement(995645..996730) Nitrosomonas sp. Is79A3 10932995 YP_004694176.1 CDS Nit79A3_0907 NC_015731.1 996813 997067 R PFAM: Modulator of Rho-dependent transcription termination; KEGG: nit:NAL212_2107 modulator of Rho-dependent transcription termination; Modulator of Rho-dependent transcription termination complement(996813..997067) Nitrosomonas sp. Is79A3 10932996 YP_004694177.1 CDS Nit79A3_0908 NC_015731.1 997173 997517 D KEGG: bpt:Bpet0062 hypothetical protein; HAMAP: Uncharacterised protein family UPF0060; PFAM: Uncharacterised protein family UPF0060; hypothetical protein 997173..997517 Nitrosomonas sp. Is79A3 10932997 YP_004694178.1 CDS Nit79A3_0909 NC_015731.1 997585 998361 R PFAM: YcgR; Type IV pilus assembly PilZ; KEGG: nit:NAL212_2247 YcgR family protein; hypothetical protein complement(997585..998361) Nitrosomonas sp. Is79A3 10932998 YP_004694179.1 CDS Nit79A3_0910 NC_015731.1 998365 998688 R PFAM: Type III secretion exporter; KEGG: nit:NAL212_2246 type III secretion exporter; type III secretion exporter complement(998365..998688) Nitrosomonas sp. Is79A3 10932999 YP_004694180.1 CDS Nit79A3_0911 NC_015731.1 998675 999736 R KEGG: nit:NAL212_2245 hypothetical protein; hypothetical protein complement(998675..999736) Nitrosomonas sp. Is79A3 10933000 YP_004694181.1 CDS Nit79A3_0912 NC_015731.1 999803 1000138 R PFAM: Flagellar export chaperone; KEGG: nit:NAL212_2244 flagellar export chaperone; flagellar export chaperone complement(999803..1000138) Nitrosomonas sp. Is79A3 10933001 YP_004694182.1 CDS Nit79A3_0913 NC_015731.1 1000170 1000598 R KEGG: nit:NAL212_2243 flagellar protein FliS; TIGRFAM: Flagellar protein FliS; PFAM: Flagellar protein FliS; flagellar protein FliS complement(1000170..1000598) Nitrosomonas sp. Is79A3 10933002 YP_004694183.1 CDS Nit79A3_0914 NC_015731.1 1000654 1002627 R PFAM: Flagellar hook-associated 2, C-terminal; Flagellar hook-associated protein 2, N-terminal; KEGG: nmu:Nmul_A1339 flagellar hook-associated 2-like; flagellar hook-associated 2 domain-containing protein complement(1000654..1002627) Nitrosomonas sp. Is79A3 10933003 YP_004694184.1 CDS Nit79A3_0915 NC_015731.1 1002660 1003031 R PFAM: Flagellar protein FlaG protein; KEGG: nit:NAL212_2241 flagellar protein FlaG protein; flagellar protein FlaG protein complement(1002660..1003031) Nitrosomonas sp. Is79A3 10933004 YP_004694185.1 CDS Nit79A3_0916 NC_015731.1 1003137 1004588 R PFAM: Flagellin, N-terminal; Flagellin hook, IN motif; Flagellin, C-terminal; KEGG: net:Neut_1824 flagellin domain-containing protein; flagellin domain-containing protein complement(1003137..1004588) Nitrosomonas sp. Is79A3 10933005 YP_004694186.1 CDS Nit79A3_0917 NC_015731.1 1004885 1006456 D TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; Signal transduction response regulator, receiver region; PAS fold-3; KEGG: net:Neut_1840 multi-sensor signal transduction histidine kinase; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; signal transduction histidine kinase 1004885..1006456 Nitrosomonas sp. Is79A3 10933006 YP_004694187.1 CDS Nit79A3_0918 NC_015731.1 1006473 1007105 D KEGG: nit:NAL212_2236 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 1006473..1007105 Nitrosomonas sp. Is79A3 10933007 YP_004694188.1 CDS Nit79A3_0919 NC_015731.1 1007244 1008956 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: nit:NAL212_0942 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 1007244..1008956 Nitrosomonas sp. Is79A3 10933008 YP_004694189.1 CDS Nit79A3_0920 NC_015731.1 1009163 1009963 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: nit:NAL212_1676 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 1009163..1009963 Nitrosomonas sp. Is79A3 10933009 YP_004694190.1 CDS Nit79A3_0921 NC_015731.1 1010125 1011363 D KEGG: nit:NAL212_1675 diguanylate phosphodiesterase metal dependent hydrolase domain; PFAM: Diguanylate phosphodiesterase, predicted; Metal-dependent hydrolase HDOD; SMART: Diguanylate phosphodiesterase, predicted; diguanylate phosphodiesterase with metal dependent hydrolase domain 1010125..1011363 Nitrosomonas sp. Is79A3 10933010 YP_004694191.1 CDS Nit79A3_0922 NC_015731.1 1011744 1012328 D KEGG: nit:NAL212_1673 hypothetical protein; hypothetical protein 1011744..1012328 Nitrosomonas sp. Is79A3 10933011 YP_004694192.1 CDS Nit79A3_0923 NC_015731.1 1012396 1012761 D KEGG: nit:NAL212_1672 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 1012396..1012761 Nitrosomonas sp. Is79A3 10933012 YP_004694193.1 CDS Nit79A3_0924 NC_015731.1 1012905 1015082 D KEGG: nit:NAL212_1671 CheA signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup, homodimeric; Signal transduction histidine kinase, phosphotransfer (Hpt) region; CheW-like protein; SMART: CheW-like protein; Signal transduction histidine kinase, phosphotransfer (Hpt) region; ATP-binding region, ATPase-like; CheA signal transduction histidine kinase 1012905..1015082 Nitrosomonas sp. Is79A3 10933013 YP_004694194.1 CDS Nit79A3_0925 NC_015731.1 1015156 1015668 D KEGG: nit:NAL212_0265 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; chemotaxis protein CheW 1015156..1015668 Nitrosomonas sp. Is79A3 10933014 YP_004694195.1 CDS Nit79A3_0926 NC_015731.1 1015732 1017468 D KEGG: nit:NAL212_0266 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; methyl-accepting chemotaxis sensory transducer 1015732..1017468 Nitrosomonas sp. Is79A3 10933015 YP_004694196.1 CDS Nit79A3_0927 NC_015731.1 1017835 1018701 D KEGG: nit:NAL212_1670 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase, CheR-type; SMART: MCP methyltransferase, CheR-type; chemotaxis protein CheR 1017835..1018701 Nitrosomonas sp. Is79A3 10933016 YP_004694197.1 CDS Nit79A3_0928 NC_015731.1 1018706 1019317 D KEGG: nit:NAL212_1669 CheD; HAMAP: Chemoreceptor glutamine deamidase cheD; PFAM: Chemoreceptor glutamine deamidase cheD; chemotaxis protein CheD 1018706..1019317 Nitrosomonas sp. Is79A3 10933017 YP_004694198.1 CDS Nit79A3_0929 NC_015731.1 1019355 1020434 D HAMAP: Chemotaxis response regulator protein-glutamate methylesterase; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; Signal transduction response regulator, receiver region; KEGG: nit:NAL212_1668 response regulator receiver modulated CheB methylesterase; SMART: Signal transduction response regulator, receiver region; response regulator receiver modulated CheB methylesterase 1019355..1020434 Nitrosomonas sp. Is79A3 10933018 YP_004694199.1 CDS Nit79A3_0930 NC_015731.1 1020488 1020982 D PFAM: NLP/P60; KEGG: nit:NAL212_1667 NLP/P60 protein; NLP/P60 protein 1020488..1020982 Nitrosomonas sp. Is79A3 10933019 YP_004694200.1 CDS Nit79A3_0931 NC_015731.1 1021133 1021450 D KEGG: nit:NAL212_3088 lipase; lipase 1021133..1021450 Nitrosomonas sp. Is79A3 10933020 YP_004694201.1 CDS Nit79A3_0933 NC_015731.1 1021967 1022539 R KEGG: afr:AFE_2093 hypothetical protein; hypothetical protein complement(1021967..1022539) Nitrosomonas sp. Is79A3 10933022 YP_004694202.1 CDS Nit79A3_0934 NC_015731.1 1022591 1022881 D KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein 1022591..1022881 Nitrosomonas sp. Is79A3 10933023 YP_004694203.1 CDS Nit79A3_0935 NC_015731.1 1022872 1023219 D KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein 1022872..1023219 Nitrosomonas sp. Is79A3 10933024 YP_004694204.1 CDS Nit79A3_0936 NC_015731.1 1023269 1024852 D KEGG: nit:NAL212_0062 transposase IS66; manually curated; PFAM: Transposase, IS66; transposase IS66 1023269..1024852 Nitrosomonas sp. Is79A3 10933025 YP_004694205.1 CDS Nit79A3_0937 NC_015731.1 1024779 1025969 R PFAM: Transposase, IS4-like; KEGG: bxe:Bxe_C1199 hypothetical protein; transposase IS4 family protein complement(1024779..1025969) Nitrosomonas sp. Is79A3 10933026 YP_004694206.1 CDS Nit79A3_0939 NC_015731.1 1026705 1028216 R TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: nit:NAL212_1204 Mg chelatase, subunit ChlI; SMART: ATPase, AAA+ type, core; Mg chelatase subunit ChlI complement(1026705..1028216) Nitrosomonas sp. Is79A3 10933028 YP_004694207.1 CDS Nit79A3_0940 NC_015731.1 1028294 1028602 R PFAM: Protein of unknown function DUF526; KEGG: nit:NAL212_1205 hypothetical protein; hypothetical protein complement(1028294..1028602) Nitrosomonas sp. Is79A3 10933029 YP_004694208.1 CDS Nit79A3_0941 NC_015731.1 1028825 1029829 D PFAM: Aminoglycoside phosphotransferase; KEGG: nit:NAL212_1206 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 1028825..1029829 Nitrosomonas sp. Is79A3 10933030 YP_004694209.1 CDS Nit79A3_0942 NC_015731.1 1029849 1030547 D PFAM: Nucleotidyl transferase; KEGG: nit:NAL212_1207 nucleotidyl transferase; Nucleotidyl transferase 1029849..1030547 Nitrosomonas sp. Is79A3 10933031 YP_004694210.1 CDS Nit79A3_0943 NC_015731.1 1030588 1031895 D PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; KEGG: nit:NAL212_1208 peptidase M24; peptidase M24 1030588..1031895 Nitrosomonas sp. Is79A3 10933032 YP_004694211.1 CDS Nit79A3_0944 NC_015731.1 1031892 1032263 D KEGG: nit:NAL212_1209 hypothetical protein; hypothetical protein 1031892..1032263 Nitrosomonas sp. Is79A3 10933033 YP_004694212.1 CDS Nit79A3_0945 NC_015731.1 1032617 1033816 D TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: nit:NAL212_0868 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 1032617..1033816 Nitrosomonas sp. Is79A3 10933034 YP_004694213.1 CDS Nit79A3_0946 NC_015731.1 1033881 1034642 R TIGRFAM: tRNA (guanine-N-7) methyltransferase; HAMAP: tRNA (guanine-N(7)-)-methyltransferase; KEGG: nit:NAL212_1398 tRNA (guanine-N(7)-)-methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase; tRNA (guanine-N(7)-)-methyltransferase complement(1033881..1034642) Nitrosomonas sp. Is79A3 10933035 YP_004694214.1 CDS Nit79A3_0947 NC_015731.1 1034581 1035405 R KEGG: nit:NAL212_1399 thiazole biosynthesis family protein; HAMAP: Thiazole biosynthesis; PFAM: Thiazole biosynthesis; Thiazole synthase complement(1034581..1035405) Nitrosomonas sp. Is79A3 10933036 YP_004694215.1 CDS Nit79A3_0948 NC_015731.1 1035453 1035656 R KEGG: nit:NAL212_1400 thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS; thiamine biosynthesis protein ThiS complement(1035453..1035656) Nitrosomonas sp. Is79A3 10933037 YP_004694216.1 CDS Nit79A3_0949 NC_015731.1 1035973 1036608 D hypothetical protein 1035973..1036608 Nitrosomonas sp. Is79A3 10933038 YP_004694217.1 CDS Nit79A3_0950 NC_015731.1 1036886 1037875 R PFAM: Peptidase M10, serralysin, C-terminal; Haemolysin-type calcium-binding region; KEGG: rsk:RSKD131_3707 hemolysin-type calcium-binding region, RTX; peptidase M10 serralysin complement(1036886..1037875) Nitrosomonas sp. Is79A3 10933039 YP_004694218.1 CDS Nit79A3_0953 NC_015731.1 1040121 1041599 D PFAM: Transposase, IS4-like; KEGG: pph:Ppha_2646 hypothetical protein; transposase IS4 family protein 1040121..1041599 Nitrosomonas sp. Is79A3 10933042 YP_004694219.1 CDS Nit79A3_0955 NC_015731.1 1043155 1044372 D PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; KEGG: nhl:Nhal_1988 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 1043155..1044372 Nitrosomonas sp. Is79A3 10933044 YP_004694220.1 CDS Nit79A3_0956 NC_015731.1 1044626 1045117 D PFAM: Protein of unknown function DUF46; KEGG: mno:Mnod_8082 protein of unknown function DUF46; hypothetical protein 1044626..1045117 Nitrosomonas sp. Is79A3 10933045 YP_004694221.1 CDS Nit79A3_0957 NC_015731.1 1045124 1046059 R PFAM: Metallophosphoesterase; KEGG: msl:Msil_1866 metallophosphoesterase; metallophosphoesterase complement(1045124..1046059) Nitrosomonas sp. Is79A3 10933046 YP_004694222.1 CDS Nit79A3_0958 NC_015731.1 1046244 1049747 D KEGG: ecg:E2348C_2622 predicted helicase; PFAM: SNF2-related; Zinc finger, SWIM-type; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SNF2-like protein 1046244..1049747 Nitrosomonas sp. Is79A3 10933047 YP_004694223.1 CDS Nit79A3_0959 NC_015731.1 1049922 1050299 D KEGG: tgr:Tgr7_0613 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 1049922..1050299 Nitrosomonas sp. Is79A3 10933048 YP_004694224.1 CDS Nit79A3_0960 NC_015731.1 1050316 1051635 D PFAM: HipA-like, C-terminal; HipA-like, N-terminal; KEGG: cph:Cpha266_2264 HipA domain-containing protein; HipA domain-containing protein 1050316..1051635 Nitrosomonas sp. Is79A3 10933049 YP_004694225.1 CDS Nit79A3_0961 NC_015731.1 1051790 1052227 D PFAM: GCN5-related N-acetyltransferase; KEGG: nit:NAL212_0903 GCN5-like N-acetyltransferase; GCN5-like N-acetyltransferase 1051790..1052227 Nitrosomonas sp. Is79A3 10933050 YP_004694226.1 CDS Nit79A3_0962 NC_015731.1 1052439 1053254 D KEGG: gca:Galf_0890 hypothetical protein; hypothetical protein 1052439..1053254 Nitrosomonas sp. Is79A3 10933051 YP_004694227.1 CDS Nit79A3_0963 NC_015731.1 1053312 1053449 R hypothetical protein complement(1053312..1053449) Nitrosomonas sp. Is79A3 10933052 YP_004694228.1 CDS Nit79A3_0964 NC_015731.1 1053397 1055001 R manually curated; PFAM: ABC transporter-like; KEGG: nit:NAL212_2655 ABC transporter-like protein; SMART: ATPase, AAA+ type, core; ABC transporter complement(1053397..1055001) Nitrosomonas sp. Is79A3 10933053 YP_004694229.1 CDS Nit79A3_0965 NC_015731.1 1055297 1055746 D hypothetical protein 1055297..1055746 Nitrosomonas sp. Is79A3 10933054 YP_004694230.1 CDS Nit79A3_0966 NC_015731.1 1055986 1056687 R hypothetical protein complement(1055986..1056687) Nitrosomonas sp. Is79A3 10933055 YP_004694231.1 CDS Nit79A3_0967 NC_015731.1 1056975 1059188 R PFAM: Endonuclease/exonuclease/phosphatase; hypothetical protein complement(1056975..1059188) Nitrosomonas sp. Is79A3 10933056 YP_004694232.1 CDS Nit79A3_0968 NC_015731.1 1059341 1060600 R PFAM: Major facilitator superfamily MFS-1; KEGG: nit:NAL212_2636 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(1059341..1060600) Nitrosomonas sp. Is79A3 10933057 YP_004694233.1 CDS Nit79A3_0969 NC_015731.1 1061238 1061885 D KEGG: nha:Nham_3051 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1061238..1061885 Nitrosomonas sp. Is79A3 10933058 YP_004694234.1 CDS Nit79A3_0970 NC_015731.1 1062118 1062546 R PFAM: PilT protein, N-terminal; KEGG: noc:Noc_1461 PilT-like protein; twitching motility protein PilT complement(1062118..1062546) Nitrosomonas sp. Is79A3 10933059 YP_004694235.1 CDS Nit79A3_0971 NC_015731.1 1062536 1062769 R KEGG: noc:Noc_1462 hypothetical protein; hypothetical protein complement(1062536..1062769) Nitrosomonas sp. Is79A3 10933060 YP_004694236.1 CDS Nit79A3_0972 NC_015731.1 1062824 1063786 R PFAM: Methyltransferase type 12; KEGG: nit:NAL212_1395 ribosomal RNA adenine methylase transferase; type 12 methyltransferase complement(1062824..1063786) Nitrosomonas sp. Is79A3 10933061 YP_004694237.1 CDS Nit79A3_0973 NC_015731.1 1064136 1065428 D PFAM: Protein of unknown function DUF2130; KEGG: nit:NAL212_1747 hypothetical protein; hypothetical protein 1064136..1065428 Nitrosomonas sp. Is79A3 10933062 YP_004694238.1 CDS Nit79A3_0974 NC_015731.1 1065499 1066395 R hypothetical protein complement(1065499..1066395) Nitrosomonas sp. Is79A3 10933063 YP_004694239.1 CDS Nit79A3_0975 NC_015731.1 1066642 1066824 R hypothetical protein complement(1066642..1066824) Nitrosomonas sp. Is79A3 10933064 YP_004694240.1 CDS Nit79A3_0976 NC_015731.1 1066821 1067168 R KEGG: nit:NAL212_2030 hypothetical protein; hypothetical protein complement(1066821..1067168) Nitrosomonas sp. Is79A3 10933065 YP_004694241.1 CDS Nit79A3_0977 NC_015731.1 1067381 1067497 R hypothetical protein complement(1067381..1067497) Nitrosomonas sp. Is79A3 10933066 YP_004694242.1 CDS Nit79A3_0978 NC_015731.1 1067592 1067945 R PFAM: BRO, N-terminal; KEGG: lhk:LHK_01667 bacteriophage antirepressor; prophage antirepressor complement(1067592..1067945) Nitrosomonas sp. Is79A3 10933067 YP_004694243.1 CDS Nit79A3_0979 NC_015731.1 1068498 1068833 D KEGG: nit:NAL212_2551 hypothetical protein; hypothetical protein 1068498..1068833 Nitrosomonas sp. Is79A3 10933068 YP_004694244.1 CDS Nit79A3_0980 NC_015731.1 1069244 1069738 D hypothetical protein 1069244..1069738 Nitrosomonas sp. Is79A3 10933069 YP_004694245.1 CDS Nit79A3_0981 NC_015731.1 1069819 1070046 R hypothetical protein complement(1069819..1070046) Nitrosomonas sp. Is79A3 10933070 YP_004694246.1 CDS Nit79A3_0982 NC_015731.1 1070320 1071597 R PFAM: SEC-C motif; KEGG: ppd:Ppro_2581 SecC motif-containing protein; SEC-C motif domain-containing protein complement(1070320..1071597) Nitrosomonas sp. Is79A3 10933071 YP_004694247.1 CDS Nit79A3_0983 NC_015731.1 1071684 1072049 R KEGG: nit:NAL212_1665 hypothetical protein; hypothetical protein complement(1071684..1072049) Nitrosomonas sp. Is79A3 10933072 YP_004694248.1 CDS Nit79A3_0984 NC_015731.1 1072553 1073143 D KEGG: lch:Lcho_2324 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1072553..1073143 Nitrosomonas sp. Is79A3 10933073 YP_004694249.1 CDS Nit79A3_0986 NC_015731.1 1074677 1075399 R PFAM: Protein of unknown function DUF81; KEGG: bco:Bcell_3693 protein of unknown function DUF81; hypothetical protein complement(1074677..1075399) Nitrosomonas sp. Is79A3 10933075 YP_004694250.1 CDS Nit79A3_0987 NC_015731.1 1075479 1076141 R KEGG: rfr:Rfer_2484 hypothetical protein; hypothetical protein complement(1075479..1076141) Nitrosomonas sp. Is79A3 10933076 YP_004694251.1 CDS Nit79A3_0988 NC_015731.1 1076462 1076998 R KEGG: gca:Galf_0997 hypothetical protein; hypothetical protein complement(1076462..1076998) Nitrosomonas sp. Is79A3 10933077 YP_004694252.1 CDS Nit79A3_0990 NC_015731.1 1078983 1080641 R KEGG: nit:NAL212_1525 hypothetical protein; hypothetical protein complement(1078983..1080641) Nitrosomonas sp. Is79A3 10933082 YP_004694253.1 CDS Nit79A3_0991 NC_015731.1 1081113 1081973 R PFAM: Diguanylate phosphodiesterase, predicted; KEGG: nit:NAL212_2092 EAL domain-containing protein; diguanylate phosphodiesterase complement(1081113..1081973) Nitrosomonas sp. Is79A3 10933083 YP_004694254.1 CDS Nit79A3_0992 NC_015731.1 1082090 1083190 R TIGRFAM: Sulphate transport system permease 1; PFAM: ABC transporter-like; KEGG: nit:NAL212_2091 sulfate ABC transporter, ATPase subunit; SMART: ATPase, AAA+ type, core; sulfate ABC transporter ATPase subunit complement(1082090..1083190) Nitrosomonas sp. Is79A3 10933084 YP_004694255.1 CDS Nit79A3_0993 NC_015731.1 1083187 1084107 R KEGG: nit:NAL212_2090 sulfate ABC transporter, inner membrane subunit CysW; TIGRFAM: Sulphate ABC transporter, permease CysW; Sulphate ABC transporter permease 2; PFAM: Binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter inner membrane subunit CysW complement(1083187..1084107) Nitrosomonas sp. Is79A3 10933085 YP_004694256.1 CDS Nit79A3_0994 NC_015731.1 1084074 1084907 R KEGG: nit:NAL212_2089 sulfate ABC transporter, inner membrane subunit CysT; TIGRFAM: Sulphate ABC transporter, permease CysT; Sulphate ABC transporter permease 2; PFAM: Binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter inner membrane subunit CysT complement(1084074..1084907) Nitrosomonas sp. Is79A3 10933086 YP_004694257.1 CDS Nit79A3_0995 NC_015731.1 1084958 1085782 R KEGG: nit:NAL212_2088 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted; diguanylate phosphodiesterase complement(1084958..1085782) Nitrosomonas sp. Is79A3 10933087 YP_004694258.1 CDS Nit79A3_0996 NC_015731.1 1085883 1086224 R PFAM: Uncharacterised conserved protein UCP020408; KEGG: neu:NE0581 diverged CheY-domain-containing protein; hypothetical protein complement(1085883..1086224) Nitrosomonas sp. Is79A3 10933088 YP_004694259.1 CDS Nit79A3_0997 NC_015731.1 1086273 1087271 R KEGG: nit:NAL212_2087 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: Thiosulphate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; sulfate ABC transporter periplasmic sulfate-binding protein complement(1086273..1087271) Nitrosomonas sp. Is79A3 10933089 YP_004694260.1 CDS Nit79A3_0998 NC_015731.1 1087303 1088973 R KEGG: nit:NAL212_2086 hypothetical protein; hypothetical protein complement(1087303..1088973) Nitrosomonas sp. Is79A3 10933090 YP_004694261.1 CDS Nit79A3_0999 NC_015731.1 1089119 1089340 R PFAM: Protein of unknown function DUF2292; KEGG: nit:NAL212_2085 hypothetical protein; hypothetical protein complement(1089119..1089340) Nitrosomonas sp. Is79A3 10933091 YP_004694262.1 CDS Nit79A3_1000 NC_015731.1 1089624 1090058 D KEGG: nit:NAL212_1526 hypothetical protein; hypothetical protein 1089624..1090058 Nitrosomonas sp. Is79A3 10933092 YP_004694263.1 CDS Nit79A3_1001 NC_015731.1 1090080 1091186 R PFAM: Lytic transglycosylase-like, catalytic; KEGG: nit:NAL212_2795 lytic transglycosylase catalytic; lytic transglycosylase complement(1090080..1091186) Nitrosomonas sp. Is79A3 10933093 YP_004694264.1 CDS Nit79A3_1002 NC_015731.1 1091843 1092430 D KEGG: eli:ELI_09275 hypothetical protein; hypothetical protein 1091843..1092430 Nitrosomonas sp. Is79A3 10933094 YP_004694265.1 CDS Nit79A3_1003 NC_015731.1 1092427 1093290 D KEGG: eli:ELI_09280 hypothetical protein; hypothetical protein 1092427..1093290 Nitrosomonas sp. Is79A3 10933095 YP_004694266.1 CDS Nit79A3_1004 NC_015731.1 1093322 1095256 D KEGG: eli:ELI_09285 phage tail sheath protein; phage tail sheath protein 1093322..1095256 Nitrosomonas sp. Is79A3 10933096 YP_004694267.1 CDS Nit79A3_1005 NC_015731.1 1095268 1095720 D KEGG: eli:ELI_09290 phage tail region protein; TIGRFAM: Conserved hypothetical protein CHP02241, phage tail region protein; PFAM: Conserved hypothetical protein CHP02241, phage tail region protein; hypothetical protein 1095268..1095720 Nitrosomonas sp. Is79A3 10933097 YP_004694268.1 CDS Nit79A3_1006 NC_015731.1 1095726 1098653 D KEGG: eli:ELI_09295 hypothetical protein; hypothetical protein 1095726..1098653 Nitrosomonas sp. Is79A3 10933098 YP_004694269.1 CDS Nit79A3_1007 NC_015731.1 1098656 1099123 D KEGG: eli:ELI_09300 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02241, phage tail region protein; PFAM: Conserved hypothetical protein CHP02241, phage tail region protein; hypothetical protein 1098656..1099123 Nitrosomonas sp. Is79A3 10933099 YP_004694270.1 CDS Nit79A3_1008 NC_015731.1 1099129 1099818 D PFAM: Peptidoglycan-binding lysin domain; KEGG: eli:ELI_09305 hypothetical protein; peptidoglycan-binding lysin domain-containing protein 1099129..1099818 Nitrosomonas sp. Is79A3 10933100 YP_004694271.1 CDS Nit79A3_1009 NC_015731.1 1099962 1100138 D hypothetical protein 1099962..1100138 Nitrosomonas sp. Is79A3 10933101 YP_004694272.1 CDS Nit79A3_1010 NC_015731.1 1100173 1101243 D KEGG: eli:ELI_09315 hypothetical protein; hypothetical protein 1100173..1101243 Nitrosomonas sp. Is79A3 10933102 YP_004694273.1 CDS Nit79A3_1011 NC_015731.1 1101243 1101965 D PFAM: Rhs element Vgr protein; KEGG: eli:ELI_09320 hypothetical protein; Rhs element Vgr protein 1101243..1101965 Nitrosomonas sp. Is79A3 10933103 YP_004694274.1 CDS Nit79A3_1012 NC_015731.1 1101970 1104093 D KEGG: eli:ELI_09325 hypothetical protein; hypothetical protein 1101970..1104093 Nitrosomonas sp. Is79A3 10933104 YP_004694275.1 CDS Nit79A3_1013 NC_015731.1 1104090 1104488 D PFAM: GPW/gp25; KEGG: eli:ELI_09330 tail lysozyme; GPW/gp25 family protein 1104090..1104488 Nitrosomonas sp. Is79A3 10933105 YP_004694276.1 CDS Nit79A3_1014 NC_015731.1 1104507 1106870 D TIGRFAM: Conserved hypothetical protein CHP02243; KEGG: eli:ELI_09335 hypothetical protein; hypothetical protein 1104507..1106870 Nitrosomonas sp. Is79A3 10933106 YP_004694277.1 CDS Nit79A3_1015 NC_015731.1 1106870 1109812 D TIGRFAM: Phage tail protein; KEGG: eli:ELI_09340 NHL repeat-containing protein; phage tail protein 1106870..1109812 Nitrosomonas sp. Is79A3 10933107 YP_004694278.1 CDS Nit79A3_1016 NC_015731.1 1109855 1111207 D KEGG: eli:ELI_09345 hypothetical protein; hypothetical protein 1109855..1111207 Nitrosomonas sp. Is79A3 10933108 YP_004694279.1 CDS Nit79A3_1017 NC_015731.1 1111224 1112504 D KEGG: eli:ELI_09350 hypothetical protein; hypothetical protein 1111224..1112504 Nitrosomonas sp. Is79A3 10933109 YP_004694280.1 CDS Nit79A3_1018 NC_015731.1 1112535 1113908 D KEGG: eli:ELI_09355 hypothetical protein; hypothetical protein 1112535..1113908 Nitrosomonas sp. Is79A3 10933110 YP_004694281.1 CDS Nit79A3_1019 NC_015731.1 1114023 1115969 D KEGG: eli:ELI_09360 hypothetical protein; hypothetical protein 1114023..1115969 Nitrosomonas sp. Is79A3 10933111 YP_004694282.1 CDS Nit79A3_1020 NC_015731.1 1115997 1118003 D KEGG: eli:ELI_09365 hypothetical protein; hypothetical protein 1115997..1118003 Nitrosomonas sp. Is79A3 10933112 YP_004694283.1 CDS Nit79A3_1021 NC_015731.1 1118000 1120054 D KEGG: eli:ELI_09370 ATPase, AAA family protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; ATPase AAA 1118000..1120054 Nitrosomonas sp. Is79A3 10933113 YP_004694284.1 CDS Nit79A3_1022 NC_015731.1 1120061 1123237 D KEGG: nml:Namu_1897 hypothetical protein; hypothetical protein 1120061..1123237 Nitrosomonas sp. Is79A3 10933114 YP_004694285.1 CDS Nit79A3_1023 NC_015731.1 1123289 1123753 D KEGG: aex:Astex_1861 hypothetical protein; hypothetical protein 1123289..1123753 Nitrosomonas sp. Is79A3 10933115 YP_004694286.1 CDS Nit79A3_1024 NC_015731.1 1123862 1124350 D PFAM: Protein of unknown function DUF1311; KEGG: ppw:PputW619_4365 hypothetical protein; hypothetical protein 1123862..1124350 Nitrosomonas sp. Is79A3 10933116 YP_004694287.1 CDS Nit79A3_1025 NC_015731.1 1124374 1125057 D KEGG: pla:Plav_0939 peptidoglycan-binding domain-containing protein; peptidoglycan-binding domain-containing protein 1124374..1125057 Nitrosomonas sp. Is79A3 10933117 YP_004694288.1 CDS Nit79A3_1026 NC_015731.1 1125303 1125863 D KEGG: bco:Bcell_1138 hypothetical protein; hypothetical protein 1125303..1125863 Nitrosomonas sp. Is79A3 10933118 YP_004694289.1 CDS Nit79A3_1027 NC_015731.1 1126116 1127078 D PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 1126116..1127078 Nitrosomonas sp. Is79A3 10933119 YP_004694290.1 CDS Nit79A3_1028 NC_015731.1 1127507 1128337 R KEGG: pno:SNOG_05888 hypothetical protein; hypothetical protein complement(1127507..1128337) Nitrosomonas sp. Is79A3 10933120 YP_004694291.1 CDS Nit79A3_1029 NC_015731.1 1128765 1129082 R hypothetical protein complement(1128765..1129082) Nitrosomonas sp. Is79A3 10933121 YP_004694292.1 CDS Nit79A3_1030 NC_015731.1 1129773 1130054 R PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: nit:NAL212_0911 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(1129773..1130054) Nitrosomonas sp. Is79A3 10933122 YP_004694293.1 CDS Nit79A3_1031 NC_015731.1 1130213 1130878 D KEGG: nit:NAL212_0912 Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 1130213..1130878 Nitrosomonas sp. Is79A3 10933123 YP_004694294.1 CDS Nit79A3_1032 NC_015731.1 1130875 1133424 D PFAM: Protein of unknown function DUF214, permase predicted; KEGG: nit:NAL212_0913 hypothetical protein; hypothetical protein 1130875..1133424 Nitrosomonas sp. Is79A3 10933124 YP_004694295.1 CDS Nit79A3_1033 NC_015731.1 1133424 1134533 D PFAM: Protein of unknown function DUF2006; KEGG: nit:NAL212_0914 hydroxyneurosporene synthase; hypothetical protein 1133424..1134533 Nitrosomonas sp. Is79A3 10933125 YP_004694296.1 CDS Nit79A3_1034 NC_015731.1 1134920 1135027 D KEGG: nit:NAL212_0915 hypothetical protein; hypothetical protein 1134920..1135027 Nitrosomonas sp. Is79A3 10933126 YP_004694297.1 CDS Nit79A3_1035 NC_015731.1 1135411 1135620 R PFAM: Heavy metal transport/detoxification protein; KEGG: nit:NAL212_0804 heavy metal transport/detoxification protein; Heavy metal transport/detoxification protein complement(1135411..1135620) Nitrosomonas sp. Is79A3 10933127 YP_004694298.1 CDS Nit79A3_1036 NC_015731.1 1135651 1137999 R KEGG: nmu:Nmul_A2276 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase complement(1135651..1137999) Nitrosomonas sp. Is79A3 10933128 YP_004694299.1 CDS Nit79A3_1037 NC_015731.1 1138145 1138762 R KEGG: nit:NAL212_0806 hypothetical protein; hypothetical protein complement(1138145..1138762) Nitrosomonas sp. Is79A3 10933129 YP_004694300.1 CDS Nit79A3_1038 NC_015731.1 1138883 1139677 R KEGG: nit:NAL212_0807 sec-independent protein translocase, TatC subunit; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase, TatC subunit complement(1138883..1139677) Nitrosomonas sp. Is79A3 10933130 YP_004694301.1 CDS Nit79A3_1039 NC_015731.1 1139743 1140141 R TIGRFAM: Twin-arginine translocation protein TatB; HAMAP: Twin-arginine translocation protein TatB; KEGG: nit:NAL212_0808 twin-arginine translocation protein, TatB subunit; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; Sec-independent protein translocase tatB-like protein complement(1139743..1140141) Nitrosomonas sp. Is79A3 10933131 YP_004694302.1 CDS Nit79A3_1040 NC_015731.1 1140227 1140568 R TIGRFAM: Twin-arginine translocation protein TatA/E; HAMAP: Twin-arginine translocation protein TatA/E; KEGG: nit:NAL212_0809 twin-arginine translocation protein, TatA/E family subunit; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; Sec-independent protein translocase tatA/E-like protein complement(1140227..1140568) Nitrosomonas sp. Is79A3 10933132 YP_004694303.1 CDS Nit79A3_1041 NC_015731.1 1140601 1140951 R PFAM: Histidine triad (HIT) protein; KEGG: nit:NAL212_0810 histidine triad (HIT) protein; histidine triad (HIT) protein complement(1140601..1140951) Nitrosomonas sp. Is79A3 10933133 YP_004694304.1 CDS Nit79A3_1042 NC_015731.1 1140955 1141281 R TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; HAMAP: Phosphoribosyl-ATP pyrophosphatase; KEGG: nit:NAL212_0811 phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-ATP pyrophosphatase complement(1140955..1141281) Nitrosomonas sp. Is79A3 10933134 YP_004694305.1 CDS Nit79A3_1043 NC_015731.1 1141278 1141745 R KEGG: nit:NAL212_0812 phosphoribosyl-AMP cyclohydrolase; HAMAP: Phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-AMP cyclohydrolase complement(1141278..1141745) Nitrosomonas sp. Is79A3 10933135 YP_004694306.1 CDS Nit79A3_1044 NC_015731.1 1141723 1142496 R TIGRFAM: Histidine biosynthesis, HisF; HAMAP: Imidazole glycerol phosphate synthase subunit hisF; KEGG: nit:NAL212_0813 imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis; imidazole glycerol phosphate synthase subunit HisF complement(1141723..1142496) Nitrosomonas sp. Is79A3 10933136 YP_004694307.1 CDS Nit79A3_1045 NC_015731.1 1142568 1143323 R TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; HAMAP: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; KEGG: nit:NAL212_0814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: Histidine biosynthesis; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] complement(1142568..1143323) Nitrosomonas sp. Is79A3 10933137 YP_004694308.1 CDS Nit79A3_1046 NC_015731.1 1143378 1144022 R TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; HAMAP: Imidazole glycerol phosphate synthase, subunit H; KEGG: nit:NAL212_0815 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: Glutamine amidotransferase class-I, C-terminal; imidazole glycerol phosphate synthase subunit HisH complement(1143378..1144022) Nitrosomonas sp. Is79A3 10933138 YP_004694309.1 CDS Nit79A3_1047 NC_015731.1 1144049 1144636 R KEGG: nit:NAL212_0816 imidazoleglycerol-phosphate dehydratase; HAMAP: Imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase; Imidazoleglycerol-phosphate dehydratase complement(1144049..1144636) Nitrosomonas sp. Is79A3 10933139 YP_004694310.1 CDS Nit79A3_1048 NC_015731.1 1144678 1145763 R TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: nit:NAL212_0817 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/II; Histidinol-phosphate aminotransferase complement(1144678..1145763) Nitrosomonas sp. Is79A3 10933140 YP_004694311.1 CDS Nit79A3_1049 NC_015731.1 1145858 1146742 R PFAM: Metal-dependent hydrolase HDOD; KEGG: gpb:HDN1F_37290 hypothetical protein; signal transduction protein complement(1145858..1146742) Nitrosomonas sp. Is79A3 10933141 YP_004694312.1 CDS Nit79A3_1050 NC_015731.1 1146908 1148095 R PFAM: Protein of unknown function DUF185; KEGG: nit:NAL212_0818 hypothetical protein; hypothetical protein complement(1146908..1148095) Nitrosomonas sp. Is79A3 10933142 YP_004694313.1 CDS Nit79A3_1051 NC_015731.1 1148180 1148920 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nit:NAL212_0819 3-oxoacyl-(acyl-carrier-protein) reductase; short-chain dehydrogenase/reductase SDR 1148180..1148920 Nitrosomonas sp. Is79A3 10933143 YP_004694314.1 CDS Nit79A3_1052 NC_015731.1 1149030 1149905 R PFAM: Integrase, catalytic core; KEGG: rso:RSp0548 ISRSO8-transposase orfB protein; Integrase catalytic subunit complement(1149030..1149905) Nitrosomonas sp. Is79A3 10933144 YP_004694315.1 CDS Nit79A3_1053 NC_015731.1 1149902 1150195 R PFAM: Transposase IS3/IS911; KEGG: gca:Galf_0832 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(1149902..1150195) Nitrosomonas sp. Is79A3 10933145 YP_004694316.1 CDS Nit79A3_1054 NC_015731.1 1150377 1150715 R TIGRFAM: Uncharacterised protein family UPF0102; HAMAP: Uncharacterised protein family UPF0102; KEGG: nit:NAL212_2320 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; hypothetical protein complement(1150377..1150715) Nitrosomonas sp. Is79A3 10933146 YP_004694317.1 CDS Nit79A3_1055 NC_015731.1 1150702 1151820 R PFAM: LppC lipoprotein; KEGG: nit:NAL212_2321 LppC family lipoprotein; LppC family lipoprotein complement(1150702..1151820) Nitrosomonas sp. Is79A3 10933147 YP_004694318.1 CDS Nit79A3_1056 NC_015731.1 1151831 1152676 D TIGRFAM: Uncharacterised protein family UPF0011; HAMAP: Ribosomal RNA small subunit methyltransferase I; KEGG: nit:NAL212_2322 hypothetical protein; PFAM: Tetrapyrrole methylase; Ribosomal RNA small subunit methyltransferase I 1151831..1152676 Nitrosomonas sp. Is79A3 10933148 YP_004694319.1 CDS Nit79A3_1057 NC_015731.1 1152886 1153923 D TIGRFAM: Dihydroorotase homodimeric type; HAMAP: Dihydroorotase; KEGG: nit:NAL212_2323 dihydroorotase; PFAM: Amidohydrolase 1; Dihydroorotase 1152886..1153923 Nitrosomonas sp. Is79A3 10933149 YP_004694320.1 CDS Nit79A3_1058 NC_015731.1 1153958 1154326 R PFAM: thiol-disulphide oxidoreductase DCC; KEGG: nmu:Nmul_A0353 thiol-disulphide oxidoreductase DCC; thiol-disulfide oxidoreductase complement(1153958..1154326) Nitrosomonas sp. Is79A3 10933150 YP_004694321.1 CDS Nit79A3_1059 NC_015731.1 1154398 1154757 R KEGG: nit:NAL212_2319 hypothetical protein; hypothetical protein complement(1154398..1154757) Nitrosomonas sp. Is79A3 10933151 YP_004694322.1 CDS Nit79A3_1062 NC_015731.1 1157830 1158204 R PFAM: Protein of unknown function DUF423; KEGG: nit:NAL212_2721 hypothetical protein; hypothetical protein complement(1157830..1158204) Nitrosomonas sp. Is79A3 10933154 YP_004694323.1 CDS Nit79A3_1063 NC_015731.1 1158261 1159607 R TIGRFAM: Exonuclease VII, large subunit; HAMAP: Exodeoxyribonuclease 7 large subunit; KEGG: nit:NAL212_2720 exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; Exodeoxyribonuclease 7 large subunit complement(1158261..1159607) Nitrosomonas sp. Is79A3 10933155 YP_004694324.1 CDS Nit79A3_1064 NC_015731.1 1159974 1160582 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: nit:NAL212_0904 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1159974..1160582 Nitrosomonas sp. Is79A3 10933156 YP_004694325.1 CDS Nit79A3_1065 NC_015731.1 1161133 1161912 D PFAM: VacJ-like lipoprotein; KEGG: nit:NAL212_0905 VacJ family lipoprotein; VacJ family lipoprotein 1161133..1161912 Nitrosomonas sp. Is79A3 10933157 YP_004694326.1 CDS Nit79A3_1066 NC_015731.1 1162065 1164074 D KEGG: nit:NAL212_0906 squalene/oxidosqualene cyclase; TIGRFAM: Hopene cyclase; Squalene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene-hopene cyclase 1162065..1164074 Nitrosomonas sp. Is79A3 10933158 YP_004694327.1 CDS Nit79A3_1067 NC_015731.1 1164020 1164787 D KEGG: nit:NAL212_0907 hopanoid-associated phosphorylase; TIGRFAM: Hopanoid-associated phosphorylase HpnG; PFAM: Nucleoside phosphorylase; hopanoid-associated phosphorylase 1164020..1164787 Nitrosomonas sp. Is79A3 10933159 YP_004694328.1 CDS Nit79A3_1068 NC_015731.1 1164795 1166558 R TIGRFAM: ABC transporter, ATP-binding/permease; PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: nit:NAL212_0908 lipid A ABC exporter family, fused ATPase and inner membrane subunits; SMART: ATPase, AAA+ type, core; lipid A ABC exporter family, fused ATPase and inner membrane subunits complement(1164795..1166558) Nitrosomonas sp. Is79A3 10933160 YP_004694329.1 CDS Nit79A3_1069 NC_015731.1 1166784 1167083 R hypothetical protein complement(1166784..1167083) Nitrosomonas sp. Is79A3 10933161 YP_004694330.1 CDS Nit79A3_1070 NC_015731.1 1167273 1168109 D KEGG: kko:Kkor_0385 hypothetical protein; hypothetical protein 1167273..1168109 Nitrosomonas sp. Is79A3 10933162 YP_004694331.1 CDS Nit79A3_1071 NC_015731.1 1168175 1169266 D KEGG: kko:Kkor_0386 TPA: chitinase C; ChiC; chitinase 1168175..1169266 Nitrosomonas sp. Is79A3 10933163 YP_004694332.1 CDS Nit79A3_1073 NC_015731.1 1171548 1172462 R PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: nit:NAL212_2395 peptidyl-prolyl cis-trans isomerase cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(1171548..1172462) Nitrosomonas sp. Is79A3 10933165 YP_004694333.1 CDS Nit79A3_1074 NC_015731.1 1172568 1173221 R KEGG: ajs:Ajs_1500 hypothetical protein; hypothetical protein complement(1172568..1173221) Nitrosomonas sp. Is79A3 10933166 YP_004694334.1 CDS Nit79A3_1075 NC_015731.1 1173467 1174798 R PFAM: Transposase, IS4-like; KEGG: amt:Amet_1582 hypothetical protein; transposase IS4 family protein complement(1173467..1174798) Nitrosomonas sp. Is79A3 10933167 YP_004694335.1 CDS Nit79A3_1076 NC_015731.1 1175127 1175450 D PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: nit:NAL212_1383 ferredoxin, C-terminal protein; 4Fe-4S ferredoxin 1175127..1175450 Nitrosomonas sp. Is79A3 10933168 YP_004694336.1 CDS Nit79A3_1077 NC_015731.1 1175479 1178244 D TIGRFAM: DNA repair protein, predicted; KEGG: nit:NAL212_1384 DNA repair protein; DNA repair protein 1175479..1178244 Nitrosomonas sp. Is79A3 10933169 YP_004694337.1 CDS Nit79A3_1078 NC_015731.1 1178237 1181713 D PFAM: DNA helicase, UvrD/REP type; KEGG: nit:NAL212_1385 UvrD/REP helicase; UvrD/REP helicase 1178237..1181713 Nitrosomonas sp. Is79A3 10933170 YP_004694338.1 CDS Nit79A3_1079 NC_015731.1 1182050 1182859 D KEGG: nit:NAL212_2606 methane monooxygenase/ammonia monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; methane monooxygenase/ammonia monooxygenase subunit C 1182050..1182859 Nitrosomonas sp. Is79A3 10933171 YP_004694339.1 CDS Nit79A3_1080 NC_015731.1 1183040 1183864 D KEGG: nit:NAL212_2605 methane monooxygenase/ammonia monooxygenase, subunit A; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; methane monooxygenase/ammonia monooxygenase subunit A 1183040..1183864 Nitrosomonas sp. Is79A3 10933172 YP_004694340.1 CDS Nit79A3_1081 NC_015731.1 1183864 1185126 D KEGG: nit:NAL212_2604 methane monooxygenase/ammonia monooxygenase, subunit B; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; methane monooxygenase/ammonia monooxygenase subunit B 1183864..1185126 Nitrosomonas sp. Is79A3 10933173 YP_004694341.1 CDS Nit79A3_1082 NC_015731.1 1185424 1185804 D KEGG: nde:NIDE2195 thiosulfate sulfurtransferase GlpE; PFAM: Rhodanese-like; SMART: Rhodanese-like; Rhodanese-like protein 1185424..1185804 Nitrosomonas sp. Is79A3 10933174 YP_004694342.1 CDS Nit79A3_1083 NC_015731.1 1185885 1187438 R PFAM: Amino acid permease-associated region; KEGG: nit:NAL212_1390 amino acid permease-associated region; amino acid permease complement(1185885..1187438) Nitrosomonas sp. Is79A3 10933175 YP_004694343.1 CDS Nit79A3_1084 NC_015731.1 1187828 1189387 D SMART: Serine/threonine-protein kinase domain; KEGG: nit:NAL212_0570 serine/threonine protein kinase; serine/threonine protein kinase 1187828..1189387 Nitrosomonas sp. Is79A3 10933176 YP_004694344.1 CDS Nit79A3_1085 NC_015731.1 1189453 1190994 R KEGG: nit:NAL212_0792 peptidase M10A and M12B matrixin and adamalysin; PFAM: Peptidase M10A/M12B, matrixin/adamalysin; SMART: Peptidase, metallopeptidases; peptidase M10A and M12B matrixin and adamalysin complement(1189453..1190994) Nitrosomonas sp. Is79A3 10933177 YP_004694345.1 CDS Nit79A3_1086 NC_015731.1 1191292 1192650 D KEGG: nmu:Nmul_A0618 cytochrome c1 signal peptide protein; hypothetical protein 1191292..1192650 Nitrosomonas sp. Is79A3 10933178 YP_004694346.1 CDS Nit79A3_1087 NC_015731.1 1193068 1193670 D hypothetical protein 1193068..1193670 Nitrosomonas sp. Is79A3 10933179 YP_004694347.1 CDS Nit79A3_1088 NC_015731.1 1193797 1194525 R TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein phoB; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; KEGG: nit:NAL212_1104 two component transcriptional regulator PhoB, winged helix family; SMART: Signal transduction response regulator, receiver region; two component transcriptional regulator PhoB, winged helix family complement(1193797..1194525) Nitrosomonas sp. Is79A3 10933180 YP_004694348.1 CDS Nit79A3_1089 NC_015731.1 1194725 1195171 R PFAM: Protein of unknown function DUF2495; KEGG: noc:Noc_0432 hypothetical protein; hypothetical protein complement(1194725..1195171) Nitrosomonas sp. Is79A3 10933181 YP_004694349.1 CDS Nit79A3_1090 NC_015731.1 1195513 1196325 D KEGG: nit:NAL212_2221 hypothetical protein; hypothetical protein 1195513..1196325 Nitrosomonas sp. Is79A3 10933182 YP_004694350.1 CDS Nit79A3_1091 NC_015731.1 1196322 1197806 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: nit:NAL212_2220 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1196322..1197806 Nitrosomonas sp. Is79A3 10933183 YP_004694351.1 CDS Nit79A3_1092 NC_015731.1 1197815 1198426 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: nit:NAL212_2219 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1197815..1198426 Nitrosomonas sp. Is79A3 10933184 YP_004694352.1 CDS Nit79A3_1093 NC_015731.1 1198429 1198833 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: nit:NAL212_2218 biopolymer transport protein ExbD/TolR; Biopolymer transport protein ExbD/TolR 1198429..1198833 Nitrosomonas sp. Is79A3 10933185 YP_004694353.1 CDS Nit79A3_1094 NC_015731.1 1198839 1199474 D KEGG: nit:NAL212_2217 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein; TonB family protein 1198839..1199474 Nitrosomonas sp. Is79A3 10933186 YP_004694354.1 CDS Nit79A3_1095 NC_015731.1 1199510 1200685 D KEGG: nit:NAL212_2216 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; hypothetical protein 1199510..1200685 Nitrosomonas sp. Is79A3 10933187 YP_004694355.1 CDS Nit79A3_1096 NC_015731.1 1201010 1204198 D PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: nit:NAL212_2215 TonB-dependent receptor; TonB-dependent receptor 1201010..1204198 Nitrosomonas sp. Is79A3 10933188 YP_004694356.1 CDS Nit79A3_1097 NC_015731.1 1204438 1204716 D hypothetical protein 1204438..1204716 Nitrosomonas sp. Is79A3 10933189 YP_004694357.1 CDS Nit79A3_1098 NC_015731.1 1204869 1206473 D KEGG: nit:NAL212_2210 hypothetical protein; hypothetical protein 1204869..1206473 Nitrosomonas sp. Is79A3 10933190 YP_004694358.1 CDS Nit79A3_1099 NC_015731.1 1207053 1207310 D KEGG: nit:NAL212_2208 hypothetical protein; hypothetical protein 1207053..1207310 Nitrosomonas sp. Is79A3 10933191 YP_004694359.1 CDS Nit79A3_1100 NC_015731.1 1207311 1207523 R hypothetical protein complement(1207311..1207523) Nitrosomonas sp. Is79A3 10933192 YP_004694360.1 CDS Nit79A3_1101 NC_015731.1 1207579 1208631 D KEGG: nit:NAL212_2207 phosphate ABC transporter, periplasmic phosphate-binding protein; TIGRFAM: Periplasmic phosphate binding protein; PFAM: Bacterial extracellular solute-binding, family 1; phosphate ABC transporter substrate-binding protein 1207579..1208631 Nitrosomonas sp. Is79A3 10933193 YP_004694361.1 CDS Nit79A3_1102 NC_015731.1 1208750 1209712 D KEGG: nit:NAL212_2206 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: Phosphate ABC transporter, permease PstC; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 1208750..1209712 Nitrosomonas sp. Is79A3 10933194 YP_004694362.1 CDS Nit79A3_1103 NC_015731.1 1209722 1210567 D KEGG: nit:NAL212_2205 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease 2; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 1209722..1210567 Nitrosomonas sp. Is79A3 10933195 YP_004694363.1 CDS Nit79A3_1104 NC_015731.1 1210643 1211515 D TIGRFAM: Phosphate transport system permease 1; PFAM: ABC transporter-like; KEGG: nit:NAL212_2204 phosphate ABC transporter, ATPase subunit; SMART: ATPase, AAA+ type, core; phosphate ABC transporter ATPase 1210643..1211515 Nitrosomonas sp. Is79A3 10933196 YP_004694364.1 CDS Nit79A3_1105 NC_015731.1 1212092 1212187 R hypothetical protein complement(1212092..1212187) Nitrosomonas sp. Is79A3 10933197 YP_004694365.1 CDS Nit79A3_1106 NC_015731.1 1212640 1213764 D KEGG: fra:Francci3_2923 transmembrane protein; transmembrane protein 1212640..1213764 Nitrosomonas sp. Is79A3 10933198 YP_004694366.1 CDS Nit79A3_1107 NC_015731.1 1214149 1214439 D KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein 1214149..1214439 Nitrosomonas sp. Is79A3 10933199 YP_004694367.1 CDS Nit79A3_1108 NC_015731.1 1214430 1214777 D KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein 1214430..1214777 Nitrosomonas sp. Is79A3 10933200 YP_004694368.1 CDS Nit79A3_1112 NC_015731.1 1217346 1218596 R KEGG: pin:Ping_3152 hypothetical protein; hypothetical protein complement(1217346..1218596) Nitrosomonas sp. Is79A3 10933204 YP_004694369.1 CDS Nit79A3_1113 NC_015731.1 1218619 1219476 R hypothetical protein complement(1218619..1219476) Nitrosomonas sp. Is79A3 10933205 YP_004694370.1 CDS Nit79A3_1114 NC_015731.1 1219466 1220110 R KEGG: rcu:RCOM_0136370 hypothetical protein; hypothetical protein complement(1219466..1220110) Nitrosomonas sp. Is79A3 10933206 YP_004694371.1 CDS Nit79A3_1116 NC_015731.1 1220654 1221631 R KEGG: neu:NE0744 hypothetical protein; hypothetical protein complement(1220654..1221631) Nitrosomonas sp. Is79A3 10933208 YP_004694372.1 CDS Nit79A3_1118 NC_015731.1 1221862 1222014 R KEGG: nit:NAL212_0312 PhoH family protein; PhoH family protein complement(1221862..1222014) Nitrosomonas sp. Is79A3 10933210 YP_004694373.1 CDS Nit79A3_1119 NC_015731.1 1222589 1224109 D PFAM: CHAD; KEGG: ttu:TERTU_3714 CHAD domain containing protein; CHAD domain containing protein 1222589..1224109 Nitrosomonas sp. Is79A3 10933211 YP_004694374.1 CDS Nit79A3_1120 NC_015731.1 1224106 1224858 D PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: ttu:TERTU_3713 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase 1224106..1224858 Nitrosomonas sp. Is79A3 10933212 YP_004694375.1 CDS Nit79A3_1121 NC_015731.1 1225323 1225739 D PFAM: NUDIX hydrolase domain; KEGG: dps:DP1250 hypothetical protein; NUDIX hydrolase 1225323..1225739 Nitrosomonas sp. Is79A3 10933213 YP_004694376.1 CDS Nit79A3_1122 NC_015731.1 1225990 1226853 R PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: cro:ROD_26331 prophage DNA adenine methylase; D12 class N6 adenine-specific DNA methyltransferase complement(1225990..1226853) Nitrosomonas sp. Is79A3 10933214 YP_004694377.1 CDS Nit79A3_1124 NC_015731.1 1227252 1229126 D PFAM: Pyruvate kinase, barrel; KEGG: tau:Tola_1286 pyruvate kinase; Pyruvate kinase barrel 1227252..1229126 Nitrosomonas sp. Is79A3 10933216 YP_004694378.1 CDS Nit79A3_1125 NC_015731.1 1229431 1230861 D KEGG: npu:Npun_R1137 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1229431..1230861 Nitrosomonas sp. Is79A3 10933217 YP_004694379.1 CDS Nit79A3_1126 NC_015731.1 1231016 1231426 R KEGG: tbd:Tbd_0366 hypothetical protein; hypothetical protein complement(1231016..1231426) Nitrosomonas sp. Is79A3 10933218 YP_004694380.1 CDS Nit79A3_1127 NC_015731.1 1231654 1233534 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Cystathionine beta-synthase, core; Diguanylate cyclase, predicted; KEGG: mms:mma_1158 hypothetical protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; diguanylate cyclase/phosphodiesterase with CBS domains 1231654..1233534 Nitrosomonas sp. Is79A3 10933219 YP_004694381.1 CDS Nit79A3_1128 NC_015731.1 1233602 1234150 R KEGG: nmu:Nmul_A2093 inorganic diphosphatase; HAMAP: Inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; Inorganic pyrophosphatase complement(1233602..1234150) Nitrosomonas sp. Is79A3 10933220 YP_004694382.1 CDS Nit79A3_1129 NC_015731.1 1234345 1236108 R TIGRFAM: ATPase, anion-transporting; PFAM: ATPase, anion-transporting; KEGG: nit:NAL212_0386 arsenite-activated ATPase ArsA; SMART: ATPase, AAA+ type, core; arsenite-activated ATPase ArsA complement(1234345..1236108) Nitrosomonas sp. Is79A3 10933221 YP_004694383.1 CDS Nit79A3_1130 NC_015731.1 1236123 1236473 R PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: nit:NAL212_0387 arsenical resistance operon trans-acting repressor ArsD; Arsenical resistance operon trans-acting repressor ArsD complement(1236123..1236473) Nitrosomonas sp. Is79A3 10933222 YP_004694384.1 CDS Nit79A3_1131 NC_015731.1 1236612 1236935 R KEGG: nit:NAL212_0084 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR complement(1236612..1236935) Nitrosomonas sp. Is79A3 10933223 YP_004694385.1 CDS Nit79A3_1132 NC_015731.1 1237167 1237742 R KEGG: noc:Noc_0534 hypothetical protein; hypothetical protein complement(1237167..1237742) Nitrosomonas sp. Is79A3 10933224 YP_004694386.1 CDS Nit79A3_1134 NC_015731.1 1238459 1239367 R KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit complement(1238459..1239367) Nitrosomonas sp. Is79A3 10933225 YP_004694387.1 CDS Nit79A3_1135 NC_015731.1 1239364 1239687 R KEGG: net:Neut_2500 transposase IS3/IS911; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein complement(1239364..1239687) Nitrosomonas sp. Is79A3 10933226 YP_004694388.1 CDS Nit79A3_1136 NC_015731.1 1240603 1243098 D KEGG: nit:NAL212_2623 peptidase S16 lon domain-containing protein; peptidase S16 lon domain-containing protein 1240603..1243098 Nitrosomonas sp. Is79A3 10933227 YP_004694389.1 CDS Nit79A3_1137 NC_015731.1 1243259 1244242 R PFAM: Multicopper oxidase, type 2; KEGG: nit:NAL212_2853 multicopper oxidase type 2; multicopper oxidase type 2 complement(1243259..1244242) Nitrosomonas sp. Is79A3 10933228 YP_004694390.1 CDS Nit79A3_1138 NC_015731.1 1244242 1245951 R PFAM: Multicopper oxidase, type 3; KEGG: nit:NAL212_2852 multicopper oxidase type 3; multicopper oxidase type 3 complement(1244242..1245951) Nitrosomonas sp. Is79A3 10933229 YP_004694391.1 CDS Nit79A3_1139 NC_015731.1 1246268 1247482 D KEGG: nit:NAL212_2850 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1246268..1247482 Nitrosomonas sp. Is79A3 10933230 YP_004694392.1 CDS Nit79A3_1140 NC_015731.1 1247498 1250653 D KEGG: nit:NAL212_2849 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 1247498..1250653 Nitrosomonas sp. Is79A3 10933231 YP_004694393.1 CDS Nit79A3_1141 NC_015731.1 1250716 1252413 D PFAM: 3-dehydroquinate synthase AroB; Shikimate kinase; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; HAMAP: Shikimate kinase; KEGG: nit:NAL212_2835 shikimate kinase; Shikimate kinase 1250716..1252413 Nitrosomonas sp. Is79A3 10933232 YP_004694394.1 CDS Nit79A3_1142 NC_015731.1 1252406 1253527 D SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; KEGG: nit:NAL212_2834 deoxyguanosinetriphosphate triphosphohydrolase; HAMAP: Deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Deoxyguanosinetriphosphate triphosphohydrolase-like protein 1252406..1253527 Nitrosomonas sp. Is79A3 10933233 YP_004694395.1 CDS Nit79A3_1143 NC_015731.1 1253702 1254775 D TIGRFAM: Uroporphyrinogen decarboxylase HemE; HAMAP: Uroporphyrinogen decarboxylase HemE; KEGG: nit:NAL212_2832 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 1253702..1254775 Nitrosomonas sp. Is79A3 10933234 YP_004694396.1 CDS Nit79A3_1144 NC_015731.1 1254821 1255516 D KEGG: nit:NAL212_2831 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator 1254821..1255516 Nitrosomonas sp. Is79A3 10933235 YP_004694397.1 CDS Nit79A3_1145 NC_015731.1 1255491 1256780 D KEGG: nit:NAL212_2830 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 1255491..1256780 Nitrosomonas sp. Is79A3 10933236 YP_004694398.1 CDS Nit79A3_1146 NC_015731.1 1257017 1257976 D PFAM: Protein of unknown function DUF897; KEGG: nit:NAL212_2829 hypothetical protein; hypothetical protein 1257017..1257976 Nitrosomonas sp. Is79A3 10933237 YP_004694399.1 CDS Nit79A3_1147 NC_015731.1 1258020 1258337 D KEGG: nit:NAL212_2828 hypothetical protein; hypothetical protein 1258020..1258337 Nitrosomonas sp. Is79A3 10933238 YP_004694400.1 CDS Nit79A3_1148 NC_015731.1 1258723 1259517 D KEGG: nit:NAL212_2827 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 1258723..1259517 Nitrosomonas sp. Is79A3 10933239 YP_004694401.1 CDS Nit79A3_1149 NC_015731.1 1259468 1260271 R TIGRFAM: Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); HAMAP: Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; KEGG: nit:NAL212_2826 bis(5'-nucleosyl)-tetraphosphatase, symmetrical; PFAM: Metallophosphoesterase; Bis(5'-nucleosyl)-tetraphosphatase, symmetrical complement(1259468..1260271) Nitrosomonas sp. Is79A3 10933240 YP_004694402.1 CDS Nit79A3_1150 NC_015731.1 1260318 1261124 R TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; HAMAP: Dihydrodipicolinate reductase; KEGG: nit:NAL212_2825 dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase; Dihydrodipicolinate reductase complement(1260318..1261124) Nitrosomonas sp. Is79A3 10933241 YP_004694403.1 CDS Nit79A3_1151 NC_015731.1 1261167 1261580 R PFAM: SmpA/OmlA; KEGG: nit:NAL212_2824 SmpA/OmlA domain-containing protein; SmpA/OmlA domain-containing protein complement(1261167..1261580) Nitrosomonas sp. Is79A3 10933242 YP_004694404.1 CDS Nit79A3_1152 NC_015731.1 1261658 1262098 D PFAM: Ferric-uptake regulator; KEGG: nit:NAL212_2823 ferric uptake regulator, Fur family; Fur family ferric uptake regulator 1261658..1262098 Nitrosomonas sp. Is79A3 10933243 YP_004694405.1 CDS Nit79A3_1153 NC_015731.1 1262058 1263374 D KEGG: nit:NAL212_2822 lytic murein transglycosylase; TIGRFAM: Lytic murein transglycosylase; PFAM: Peptidoglycan binding-like; lytic murein transglycosylase 1262058..1263374 Nitrosomonas sp. Is79A3 10933244 YP_004694406.1 CDS Nit79A3_1154 NC_015731.1 1263411 1264397 R TIGRFAM: Malate dehydrogenase, NAD/NADP; HAMAP: Malate dehydrogenase; KEGG: nit:NAL212_2821 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase; malate dehydrogenase complement(1263411..1264397) Nitrosomonas sp. Is79A3 10933245 YP_004694407.1 CDS Nit79A3_1155 NC_015731.1 1264822 1267308 R KEGG: net:Neut_2269 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; P-type HAD superfamily ATPase complement(1264822..1267308) Nitrosomonas sp. Is79A3 10933246 YP_004694408.1 CDS Nit79A3_1156 NC_015731.1 1267586 1267972 D KEGG: nmu:Nmul_A1142 hypothetical protein; hypothetical protein 1267586..1267972 Nitrosomonas sp. Is79A3 10933247 YP_004694409.1 CDS Nit79A3_1157 NC_015731.1 1268322 1268495 R KEGG: nmu:Nmul_A1142 hypothetical protein; hypothetical protein complement(1268322..1268495) Nitrosomonas sp. Is79A3 10933248 YP_004694410.1 CDS Nit79A3_1158 NC_015731.1 1268946 1270157 R PFAM: ATPase, AFG1-like; KEGG: nit:NAL212_1253 AFG1-family ATPase; AFG1-family ATPase complement(1268946..1270157) Nitrosomonas sp. Is79A3 10933249 YP_004694411.1 CDS Nit79A3_1159 NC_015731.1 1270164 1271540 R PFAM: Major facilitator superfamily MFS-1; KEGG: nit:NAL212_1254 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(1270164..1271540) Nitrosomonas sp. Is79A3 10933250 YP_004694412.1 CDS Nit79A3_1160 NC_015731.1 1271537 1272310 R KEGG: nit:NAL212_1255 exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III complement(1271537..1272310) Nitrosomonas sp. Is79A3 10933251 YP_004694413.1 CDS Nit79A3_1161 NC_015731.1 1272337 1272978 D TIGRFAM: Orotate phosphoribosyl transferase; HAMAP: Orotate phosphoribosyltransferase; KEGG: nit:NAL212_1256 orotate phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; Orotate phosphoribosyltransferase 1272337..1272978 Nitrosomonas sp. Is79A3 10933252 YP_004694414.1 CDS Nit79A3_1162 NC_015731.1 1273106 1273879 R KEGG: nit:NAL212_0590 hypothetical protein; hypothetical protein complement(1273106..1273879) Nitrosomonas sp. Is79A3 10933253 YP_004694415.1 CDS Nit79A3_1163 NC_015731.1 1274223 1274822 R PFAM: Protein of unknown function DUF882, bacterial; KEGG: nit:NAL212_1269 hypothetical protein; hypothetical protein complement(1274223..1274822) Nitrosomonas sp. Is79A3 10933254 YP_004694416.1 CDS Nit79A3_1164 NC_015731.1 1274873 1276507 R PFAM: YkuD domain; Peptidoglycan binding-like; KEGG: nit:NAL212_1270 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(1274873..1276507) Nitrosomonas sp. Is79A3 10933255 YP_004694417.1 CDS Nit79A3_1165 NC_015731.1 1276745 1278049 D PFAM: Peptidase M18, aminopeptidase I; KEGG: neu:NE1533 aminopeptidase 2; peptidase M18 aminopeptidase I 1276745..1278049 Nitrosomonas sp. Is79A3 10933256 YP_004694418.1 CDS Nit79A3_1166 NC_015731.1 1278120 1279088 R KEGG: fjo:Fjoh_3586 hypothetical protein; hypothetical protein complement(1278120..1279088) Nitrosomonas sp. Is79A3 10933257 YP_004694419.1 CDS Nit79A3_1167 NC_015731.1 1279235 1280539 D PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 1279235..1280539 Nitrosomonas sp. Is79A3 10933258 YP_004694420.1 CDS Nit79A3_1168 NC_015731.1 1281234 1287272 R PFAM: Haemolysin-type calcium-binding region; KEGG: nit:NAL212_1700 hypothetical protein; Hemolysin-type calcium-binding protein complement(1281234..1287272) Nitrosomonas sp. Is79A3 10933259 YP_004694421.1 CDS Nit79A3_1169 NC_015731.1 1287515 1288480 R KEGG: nit:NAL212_1699 Sel1 domain-containing protein repeat-containing protein; PFAM: Sel1-like; SMART: Sel1-like; Sel1 domain-containing protein complement(1287515..1288480) Nitrosomonas sp. Is79A3 10933260 YP_004694422.1 CDS Nit79A3_1170 NC_015731.1 1288587 1289423 R PFAM: Phage Tail Collar; KEGG: nit:NAL212_1698 tail collar domain-containing protein; Tail Collar domain-containing protein complement(1288587..1289423) Nitrosomonas sp. Is79A3 10933261 YP_004694423.1 CDS Nit79A3_1171 NC_015731.1 1289551 1290780 D KEGG: nit:NAL212_1697 hypothetical protein; hypothetical protein 1289551..1290780 Nitrosomonas sp. Is79A3 10933262 YP_004694424.1 CDS Nit79A3_1172 NC_015731.1 1290777 1292330 D PFAM: GTP-binding protein, HSR1-related; KEGG: nit:NAL212_1696 GTP-binding protein HSR1-like protein; GTP-binding protein HSR1-like protein 1290777..1292330 Nitrosomonas sp. Is79A3 10933263 YP_004694425.1 CDS Nit79A3_1173 NC_015731.1 1292404 1293165 D KEGG: nit:NAL212_1694 hypothetical protein; hypothetical protein 1292404..1293165 Nitrosomonas sp. Is79A3 10933264 YP_004694426.1 CDS Nit79A3_1174 NC_015731.1 1293282 1294295 D PFAM: Bacterial extracellular solute-binding, family 1; KEGG: nit:NAL212_1693 extracellular solute-binding protein family 1; ABC transporter substrate-binding protein 1293282..1294295 Nitrosomonas sp. Is79A3 10933265 YP_004694427.1 CDS Nit79A3_1175 NC_015731.1 1294400 1296001 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: nit:NAL212_1692 ABC-type transporter, integral membrane subunit; ABC transporter permease 1294400..1296001 Nitrosomonas sp. Is79A3 10933266 YP_004694428.1 CDS Nit79A3_1176 NC_015731.1 1296006 1297061 D KEGG: nit:NAL212_1691 Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; Transport-associated OB, type 2; SMART: ATPase, AAA+ type, core; ABC transporter 1296006..1297061 Nitrosomonas sp. Is79A3 10933267 YP_004694429.1 CDS Nit79A3_1177 NC_015731.1 1297287 1297613 D KEGG: nit:NAL212_1690 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin 1297287..1297613 Nitrosomonas sp. Is79A3 10933268 YP_004694430.1 CDS Nit79A3_1178 NC_015731.1 1297761 1299020 D TIGRFAM: Transcription termination factor Rho; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; KEGG: nit:NAL212_1689 transcription termination factor Rho; SMART: Cold shock protein; ATPase, AAA+ type, core; transcription termination factor Rho 1297761..1299020 Nitrosomonas sp. Is79A3 10933269 YP_004694431.1 CDS Nit79A3_1179 NC_015731.1 1299260 1299472 D TIGRFAM: Ribosomal protein L31; HAMAP: 50S ribosomal protein L31; KEGG: nmu:Nmul_A2086 50S ribosomal protein L31; PFAM: Ribosomal protein L31; 50S ribosomal protein L31 1299260..1299472 Nitrosomonas sp. Is79A3 10933270 YP_004694432.1 CDS Nit79A3_1180 NC_015731.1 1299589 1299909 R PFAM: Cupin 2, conserved barrel; KEGG: nit:NAL212_1299 cupin 2 barrel domain-containing protein; cupin complement(1299589..1299909) Nitrosomonas sp. Is79A3 10933271 YP_004694433.1 CDS Nit79A3_1181 NC_015731.1 1299955 1300959 R PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; KEGG: nit:NAL212_1252 mannitol dehydrogenase; molecular chaperone GroES complement(1299955..1300959) Nitrosomonas sp. Is79A3 10933272 YP_004694434.1 CDS Nit79A3_1183 NC_015731.1 1301870 1302778 R KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit complement(1301870..1302778) Nitrosomonas sp. Is79A3 10933273 YP_004694435.1 CDS Nit79A3_1184 NC_015731.1 1302775 1303098 R PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein complement(1302775..1303098) Nitrosomonas sp. Is79A3 10933274 YP_004694436.1 CDS Nit79A3_1185 NC_015731.1 1303828 1304640 D KEGG: nit:NAL212_1301 polysaccharide export protein EpsE; TIGRFAM: Polysaccharide export EpsE; PFAM: Polysaccharide export protein; Soluble ligand binding domain; polysaccharide export protein EpsE 1303828..1304640 Nitrosomonas sp. Is79A3 10933275 YP_004694437.1 CDS Nit79A3_1186 NC_015731.1 1304720 1306087 D KEGG: nit:NAL212_1302 chain length determinant protein EpsF; TIGRFAM: Chain length determinant protein EpsF; PFAM: Lipopolysaccharide biosynthesis; chain length determinant protein EpsF 1304720..1306087 Nitrosomonas sp. Is79A3 10933276 YP_004694438.1 CDS Nit79A3_1187 NC_015731.1 1306122 1307024 D TIGRFAM: Tyrosine-protein kinase, chain length determinant protein EpsG; Exopolysaccharide synthesis protein; KEGG: nit:NAL212_1303 chain length determinant protein tyrosine kinase EpsG; chain length determinant protein tyrosine kinase EpsG 1306122..1307024 Nitrosomonas sp. Is79A3 10933277 YP_004694439.1 CDS Nit79A3_1188 NC_015731.1 1307047 1307940 D KEGG: nit:NAL212_1304 exosortase 2; TIGRFAM: Exosortase 2; Exosortase, EpsH; PFAM: Exosortase EpsH-related; exosortase 1307047..1307940 Nitrosomonas sp. Is79A3 10933278 YP_004694440.1 CDS Nit79A3_1189 NC_015731.1 1308078 1308764 D TIGRFAM: Methanolan biosynthesis EpsI; KEGG: nit:NAL212_1306 EpsI family protein; EpsI family protein 1308078..1308764 Nitrosomonas sp. Is79A3 10933279 YP_004694441.1 CDS Nit79A3_1190 NC_015731.1 1308924 1309553 D PFAM: Methyltransferase type 11; KEGG: nph:NP1930A sugar metabolism cluster protein (quinone/porphyrin-methyltransferase); type 11 methyltransferase 1308924..1309553 Nitrosomonas sp. Is79A3 10933280 YP_004694442.1 CDS Nit79A3_1191 NC_015731.1 1309736 1311289 D KEGG: nit:NAL212_1307 hypothetical protein; hypothetical protein 1309736..1311289 Nitrosomonas sp. Is79A3 10933281 YP_004694443.1 CDS Nit79A3_1192 NC_015731.1 1311406 1312143 D hypothetical protein 1311406..1312143 Nitrosomonas sp. Is79A3 10933282 YP_004694444.1 CDS Nit79A3_1193 NC_015731.1 1312407 1313279 D PFAM: Sulfotransferase; KEGG: nit:NAL212_1309 sulfotransferase; sulfotransferase 1312407..1313279 Nitrosomonas sp. Is79A3 10933283 YP_004694445.1 CDS Nit79A3_1194 NC_015731.1 1313290 1314057 D PFAM: Polysaccharide deacetylase; KEGG: bmr:BMI_I326 polysaccharide deacetylase; polysaccharide deacetylase 1313290..1314057 Nitrosomonas sp. Is79A3 10933284 YP_004694446.1 CDS Nit79A3_1195 NC_015731.1 1314204 1315121 D PFAM: Sulfotransferase; KEGG: sun:SUN_1532 sulfotransferase; sulfotransferase 1314204..1315121 Nitrosomonas sp. Is79A3 10933285 YP_004694447.1 CDS Nit79A3_1197 NC_015731.1 1315712 1316848 R KEGG: cph:Cpha266_2339 transposase, IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein complement(1315712..1316848) Nitrosomonas sp. Is79A3 10933287 YP_004694448.1 CDS Nit79A3_1198 NC_015731.1 1317071 1317739 D PFAM: Methyltransferase type 11; KEGG: nhl:Nhal_3317 hypothetical protein; type 11 methyltransferase 1317071..1317739 Nitrosomonas sp. Is79A3 10933288 YP_004694449.1 CDS Nit79A3_1199 NC_015731.1 1317861 1319165 D PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 1317861..1319165 Nitrosomonas sp. Is79A3 10933289 YP_004694450.1 CDS Nit79A3_1200 NC_015731.1 1319417 1321054 D PFAM: Transposase, IS4-like; KEGG: afe:Lferr_1749 hypothetical protein; transposase IS4 family protein 1319417..1321054 Nitrosomonas sp. Is79A3 10933290 YP_004694451.1 CDS Nit79A3_1204 NC_015731.1 1323015 1323305 D KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein 1323015..1323305 Nitrosomonas sp. Is79A3 10933294 YP_004694452.1 CDS Nit79A3_1205 NC_015731.1 1323296 1323643 D KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein 1323296..1323643 Nitrosomonas sp. Is79A3 10933295 YP_004694453.1 CDS Nit79A3_1206 NC_015731.1 1323693 1325276 D KEGG: nit:NAL212_0062 transposase IS66; manually curated; PFAM: Transposase, IS66; transposase IS66 1323693..1325276 Nitrosomonas sp. Is79A3 10933296 YP_004694454.1 CDS Nit79A3_1207 NC_015731.1 1325415 1325918 D KEGG: afe:Lferr_0146 hypothetical protein; hypothetical protein 1325415..1325918 Nitrosomonas sp. Is79A3 10933297 YP_004694455.1 CDS Nit79A3_1208 NC_015731.1 1325891 1326475 D KEGG: afe:Lferr_0145 transposase; hypothetical protein 1325891..1326475 Nitrosomonas sp. Is79A3 10933298 YP_004694456.1 CDS Nit79A3_1209 NC_015731.1 1326456 1326623 R KEGG: nit:NAL212_3145 IS5 family transposase; IS5 family transposase complement(1326456..1326623) Nitrosomonas sp. Is79A3 10933299 YP_004694457.1 CDS Nit79A3_1210 NC_015731.1 1326838 1327197 D PFAM: Transposase IS200-like; KEGG: eba:ebA563 transposition helper protein; transposase IS200-family protein 1326838..1327197 Nitrosomonas sp. Is79A3 10933300 YP_004694458.1 CDS Nit79A3_1211 NC_015731.1 1327484 1328650 R KEGG: nit:NAL212_2625 hypothetical protein; hypothetical protein complement(1327484..1328650) Nitrosomonas sp. Is79A3 10933301 YP_004694459.1 CDS Nit79A3_1213 NC_015731.1 1330051 1330371 R PFAM: Transposase IS3/IS911; KEGG: nit:NAL212_0153 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(1330051..1330371) Nitrosomonas sp. Is79A3 10933303 YP_004694460.1 CDS Nit79A3_1215 NC_015731.1 1331044 1331859 R manually curated; TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; KEGG: nit:NAL212_1317 glycosyl transferase, WecB/TagA/CpsF family; PFAM: Glycosyl transferase WecB/TagA/CpsF; glycosyl transferase, WecB/TagA/CpsF family complement(1331044..1331859) Nitrosomonas sp. Is79A3 10933305 YP_004694461.1 CDS Nit79A3_1216 NC_015731.1 1332279 1333799 R KEGG: tbd:Tbd_1785 hypothetical protein; hypothetical protein complement(1332279..1333799) Nitrosomonas sp. Is79A3 10933306 YP_004694462.1 CDS Nit79A3_1217 NC_015731.1 1333796 1335010 R PFAM: Glycosyl transferase, group 1; KEGG: nit:NAL212_1313 glycosyl transferase group 1; group 1 glycosyl transferase complement(1333796..1335010) Nitrosomonas sp. Is79A3 10933307 YP_004694463.1 CDS Nit79A3_1220 NC_015731.1 1337556 1337687 R hypothetical protein complement(1337556..1337687) Nitrosomonas sp. Is79A3 10933310 YP_004694464.1 CDS Nit79A3_1221 NC_015731.1 1338157 1342269 D KEGG: lch:Lcho_0632 Na-Ca exchanger/integrin-beta4; PFAM: Ig; ASPIC/UnbV; Haemolysin-type calcium-binding region; SMART: Dystroglycan-type cadherin-like; Ig family protein 1338157..1342269 Nitrosomonas sp. Is79A3 10933311 YP_004694465.1 CDS Nit79A3_1222 NC_015731.1 1342844 1343935 D TIGRFAM: Glycine cleavage system T protein; HAMAP: Aminomethyltransferase; KEGG: nit:NAL212_1914 aminomethyltransferase; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; glycine cleavage system protein T 1342844..1343935 Nitrosomonas sp. Is79A3 10933312 YP_004694466.1 CDS Nit79A3_1223 NC_015731.1 1343978 1344367 D TIGRFAM: Glycine cleavage H-protein, subgroup; HAMAP: Glycine cleavage H-protein; KEGG: nit:NAL212_1913 glycine cleavage system H protein; PFAM: Glycine cleavage H-protein; Glycine cleavage system H protein 1343978..1344367 Nitrosomonas sp. Is79A3 10933313 YP_004694467.1 CDS Nit79A3_1224 NC_015731.1 1344443 1345795 D KEGG: nit:NAL212_1912 glycine dehydrogenase (decarboxylating); HAMAP: glycine dehydrogenase [decarboxylating] subunit 1; PFAM: Glycine cleavage system P-protein, N-terminal; glycine dehydrogenase (decarboxylating) subunit 1 1344443..1345795 Nitrosomonas sp. Is79A3 10933314 YP_004694468.1 CDS Nit79A3_1225 NC_015731.1 1345833 1346327 D KEGG: nit:NAL212_1911 redoxin domain-containing protein; HAMAP: thiol peroxidase; PFAM: Redoxin; thiol peroxidase 1345833..1346327 Nitrosomonas sp. Is79A3 10933315 YP_004694469.1 CDS Nit79A3_1226 NC_015731.1 1346350 1347801 D KEGG: nit:NAL212_1910 glycine cleavage system P-protein; HAMAP: glycine dehydrogenase [decarboxylating] subunit 2; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase; glycine dehydrogenase (decarboxylating) subunit 2 1346350..1347801 Nitrosomonas sp. Is79A3 10933316 YP_004694470.1 CDS Nit79A3_1227 NC_015731.1 1347925 1348860 D PFAM: Carbohydrate/purine kinase; KEGG: nit:NAL212_1909 adenosine kinase; PfkB domain-containing protein 1347925..1348860 Nitrosomonas sp. Is79A3 10933317 YP_004694471.1 CDS Nit79A3_1228 NC_015731.1 1348967 1349500 R KEGG: ctt:CtCNB1_2565 probable mannitol operon repressor; hypothetical protein complement(1348967..1349500) Nitrosomonas sp. Is79A3 10933318 YP_004694472.1 CDS Nit79A3_1229 NC_015731.1 1349602 1350450 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: nit:NAL212_0961 endonuclease/exonuclease/phosphatase; hypothetical protein complement(1349602..1350450) Nitrosomonas sp. Is79A3 10933319 YP_004694473.1 CDS Nit79A3_1230 NC_015731.1 1350723 1351148 D KEGG: nit:NAL212_2279 hypothetical protein; hypothetical protein 1350723..1351148 Nitrosomonas sp. Is79A3 10933320 YP_004694474.1 CDS Nit79A3_1231 NC_015731.1 1351165 1351713 D KEGG: nit:NAL212_2278 hypothetical protein; hypothetical protein 1351165..1351713 Nitrosomonas sp. Is79A3 10933321 YP_004694475.1 CDS Nit79A3_1232 NC_015731.1 1351788 1352342 R KEGG: nit:NAL212_2819 hypothetical protein; hypothetical protein complement(1351788..1352342) Nitrosomonas sp. Is79A3 10933322 YP_004694476.1 CDS Nit79A3_1233 NC_015731.1 1352459 1353268 R KEGG: nit:NAL212_2606 methane monooxygenase/ammonia monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; methane monooxygenase/ammonia monooxygenase subunit C complement(1352459..1353268) Nitrosomonas sp. Is79A3 10933323 YP_004694477.1 CDS Nit79A3_1234 NC_015731.1 1353540 1354214 R KEGG: nit:NAL212_2815 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(1353540..1354214) Nitrosomonas sp. Is79A3 10933324 YP_004694478.1 CDS Nit79A3_1235 NC_015731.1 1354224 1356131 R TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; PAS fold-4; KEGG: nit:NAL212_2814 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; PAS/PAC sensor signal transduction histidine kinase complement(1354224..1356131) Nitrosomonas sp. Is79A3 10933325 YP_004694479.1 CDS Nit79A3_1236 NC_015731.1 1356288 1358684 R TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-3; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; KEGG: nhl:Nhal_2031 PAS sensor protein; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; Signal transduction response regulator, receiver region; PAS/PAC sensor hybrid histidine kinase complement(1356288..1358684) Nitrosomonas sp. Is79A3 10933326 YP_004694480.1 CDS Nit79A3_1237 NC_015731.1 1358793 1359455 R KEGG: nit:NAL212_2280 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(1358793..1359455) Nitrosomonas sp. Is79A3 10933327 YP_004694481.1 CDS Nit79A3_1238 NC_015731.1 1359452 1361326 R TIGRFAM: PAS; PFAM: PAS fold-3; PAS fold; ATP-binding region, ATPase-like; KEGG: meh:M301_1662 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAS; PAC motif; multi-sensor signal transduction histidine kinase complement(1359452..1361326) Nitrosomonas sp. Is79A3 10933328 YP_004694482.1 CDS Nit79A3_1239 NC_015731.1 1361485 1361700 R hypothetical protein complement(1361485..1361700) Nitrosomonas sp. Is79A3 10933329 YP_004694483.1 CDS Nit79A3_1240 NC_015731.1 1361703 1362665 D PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 1361703..1362665 Nitrosomonas sp. Is79A3 10933330 YP_004694484.1 CDS Nit79A3_1241 NC_015731.1 1363214 1363945 D SMART: HTH transcriptional regulator, Crp; KEGG: bxe:Bxe_C0542 Crp/FNR family transcriptional regulator; Crp/Fnr family transcriptional regulator 1363214..1363945 Nitrosomonas sp. Is79A3 10933331 YP_004694485.1 CDS Nit79A3_1243 NC_015731.1 1365940 1366848 R KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit complement(1365940..1366848) Nitrosomonas sp. Is79A3 10933333 YP_004694486.1 CDS Nit79A3_1244 NC_015731.1 1366845 1367168 R PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein complement(1366845..1367168) Nitrosomonas sp. Is79A3 10933334 YP_004694487.1 CDS Nit79A3_1245 NC_015731.1 1367222 1367422 R KEGG: nit:NAL212_1594 hypothetical protein; hypothetical protein complement(1367222..1367422) Nitrosomonas sp. Is79A3 10933335 YP_004694488.1 CDS Nit79A3_1246 NC_015731.1 1367576 1368178 R KEGG: nit:NAL212_1593 hypothetical protein; hypothetical protein complement(1367576..1368178) Nitrosomonas sp. Is79A3 10933336 YP_004694489.1 CDS Nit79A3_1247 NC_015731.1 1368574 1368960 R KEGG: nit:NAL212_1949 hypothetical protein; hypothetical protein complement(1368574..1368960) Nitrosomonas sp. Is79A3 10933337 YP_004694490.1 CDS Nit79A3_1248 NC_015731.1 1369402 1369797 D KEGG: pna:Pnap_0133 DNA polymerase beta subunit; DNA polymerase subunit beta 1369402..1369797 Nitrosomonas sp. Is79A3 10933338 YP_004694491.1 CDS Nit79A3_1249 NC_015731.1 1369831 1370217 D PFAM: Protein of unknown function DUF86; KEGG: pna:Pnap_0134 hypothetical protein; hypothetical protein 1369831..1370217 Nitrosomonas sp. Is79A3 10933339 YP_004694492.1 CDS Nit79A3_1250 NC_015731.1 1370471 1371334 R KEGG: nwa:Nwat_2452 hypothetical protein; hypothetical protein complement(1370471..1371334) Nitrosomonas sp. Is79A3 10933340 YP_004694493.1 CDS Nit79A3_1252 NC_015731.1 1372535 1374862 R KEGG: nit:NAL212_0869 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor A complement(1372535..1374862) Nitrosomonas sp. Is79A3 10933342 YP_004694494.1 CDS Nit79A3_1253 NC_015731.1 1374920 1375726 R KEGG: nit:NAL212_0870 nitric oxide reductase NorQ protein; nitric oxide reductase NorQ protein complement(1374920..1375726) Nitrosomonas sp. Is79A3 10933343 YP_004694495.1 CDS Nit79A3_1254 NC_015731.1 1375834 1376190 R PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: nit:NAL212_0871 ribulose-bisphosphate carboxylase; ribulose bisphosphate carboxylase small chain complement(1375834..1376190) Nitrosomonas sp. Is79A3 10933344 YP_004694496.1 CDS Nit79A3_1255 NC_015731.1 1376270 1377691 R KEGG: nit:NAL212_0872 ribulose-bisphosphate carboxylase; HAMAP: Ribulose bisphosphate carboxylase large chain; PFAM: Ribulose bisphosphate carboxylase, large subunit, C-terminal; Ribulose bisphosphate carboxylase, large subunit, N-terminal; Ribulose bisphosphate carboxylase large chain complement(1376270..1377691) Nitrosomonas sp. Is79A3 10933345 YP_004694497.1 CDS Nit79A3_1256 NC_015731.1 1377883 1378797 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nit:NAL212_0873 transcriptional regulator, LysR family; LysR family transcriptional regulator 1377883..1378797 Nitrosomonas sp. Is79A3 10933346 YP_004694498.1 CDS Nit79A3_1257 NC_015731.1 1378927 1379625 D KEGG: nit:NAL212_0874 hypothetical protein; hypothetical protein 1378927..1379625 Nitrosomonas sp. Is79A3 10933347 YP_004694499.1 CDS Nit79A3_1258 NC_015731.1 1379657 1379884 D KEGG: nit:NAL212_0875 hypothetical protein; hypothetical protein 1379657..1379884 Nitrosomonas sp. Is79A3 10933348 YP_004694500.1 CDS Nit79A3_1259 NC_015731.1 1380192 1381520 D SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; KEGG: nit:NAL212_0876 MiaB-like tRNA modifying enzyme YliG; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; PFAM: Methylthiotransferase, N-terminal; Radical SAM; 30S ribosomal protein S12 methylthiotransferase 1380192..1381520 Nitrosomonas sp. Is79A3 10933349 YP_004694501.1 CDS Nit79A3_1260 NC_015731.1 1381737 1382357 R KEGG: nit:NAL212_2318 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(1381737..1382357) Nitrosomonas sp. Is79A3 10933350 YP_004694502.1 CDS Nit79A3_1261 NC_015731.1 1382540 1383502 R PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein complement(1382540..1383502) Nitrosomonas sp. Is79A3 10933351 YP_004694503.1 CDS Nit79A3_1262 NC_015731.1 1384006 1384467 R KEGG: sdn:Sden_2935 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase complement(1384006..1384467) Nitrosomonas sp. Is79A3 10933352 YP_004694504.1 CDS Nit79A3_1263 NC_015731.1 1384481 1384876 R KEGG: nit:NAL212_1684 lysophosphatidic acid receptor 2-like protein; lysophosphatidic acid receptor 2-like protein complement(1384481..1384876) Nitrosomonas sp. Is79A3 10933353 YP_004694505.1 CDS Nit79A3_1264 NC_015731.1 1384891 1386315 R KEGG: nit:NAL212_0795 Na+/H+ antiporter NhaC; TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like; Na+/H+ antiporter NhaC complement(1384891..1386315) Nitrosomonas sp. Is79A3 10933354 YP_004694506.1 CDS Nit79A3_1266 NC_015731.1 1386834 1387985 D PFAM: (Uracil-5)-methyltransferase; KEGG: nit:NAL212_0793 (uracil-5)-methyltransferase; (uracil-5)-methyltransferase 1386834..1387985 Nitrosomonas sp. Is79A3 10933356 YP_004694507.1 CDS Nit79A3_1267 NC_015731.1 1388214 1388828 D TIGRFAM: ABC transporter, haem export, CcmA; PFAM: ABC transporter-like; KEGG: nit:NAL212_1557 heme exporter protein CcmA; SMART: ATPase, AAA+ type, core; heme exporter protein CcmA 1388214..1388828 Nitrosomonas sp. Is79A3 10933357 YP_004694508.1 CDS Nit79A3_1268 NC_015731.1 1388830 1389489 D KEGG: nit:NAL212_1558 heme exporter protein CcmB; TIGRFAM: Cytochrome c-type biogenesis protein CcmB; PFAM: Cytochrome c-type biogenesis protein CcmB; heme exporter protein CcmB 1388830..1389489 Nitrosomonas sp. Is79A3 10933358 YP_004694509.1 CDS Nit79A3_1269 NC_015731.1 1389711 1390454 D KEGG: nit:NAL212_1559 heme exporter protein CcmC; TIGRFAM: Cytochrome c-type biogenesis protein CcmC; PFAM: Cytochrome c assembly protein; heme exporter protein CcmC 1389711..1390454 Nitrosomonas sp. Is79A3 10933359 YP_004694510.1 CDS Nit79A3_1270 NC_015731.1 1390454 1390651 D TIGRFAM: Haem exporter protein D (CcmD); KEGG: nit:NAL212_1560 heme exporter protein CcmD; heme exporter protein CcmD 1390454..1390651 Nitrosomonas sp. Is79A3 10933360 YP_004694511.1 CDS Nit79A3_1271 NC_015731.1 1390635 1391084 D KEGG: nit:NAL212_1561 CcmE/CycJ protein; HAMAP: CcmE/CycJ protein; PFAM: CcmE/CycJ protein; Cytochrome c-type biogenesis protein ccmE 1390635..1391084 Nitrosomonas sp. Is79A3 10933361 YP_004694512.1 CDS Nit79A3_1272 NC_015731.1 1391168 1393222 D KEGG: nit:NAL212_1562 cytochrome c-type biogenesis protein CcmF; TIGRFAM: Cytochrome c-type biogenesis protein CcmF; PFAM: Cytochrome c assembly protein; cytochrome c-type biogenesis protein CcmF 1391168..1393222 Nitrosomonas sp. Is79A3 10933362 YP_004694513.1 CDS Nit79A3_1273 NC_015731.1 1393219 1393749 D KEGG: nit:NAL212_1563 periplasmic protein thiol/disulfide oxidoreductase DsbE; TIGRFAM: Periplasmic protein thiol:disulphide oxidoreductase DsbE; PFAM: Redoxin; periplasmic protein thiol/disulfide oxidoreductase DsbE 1393219..1393749 Nitrosomonas sp. Is79A3 10933363 YP_004694514.1 CDS Nit79A3_1274 NC_015731.1 1393764 1394294 D PFAM: Cytochrome C biogenesis protein CcmH; KEGG: nit:NAL212_1564 cytochrome c biogenesis protein; cytochrome C biogenesis protein 1393764..1394294 Nitrosomonas sp. Is79A3 10933364 YP_004694515.1 CDS Nit79A3_1275 NC_015731.1 1394291 1395625 D TIGRFAM: Cytochrome c-type biogenesis protein CcmI; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: nit:NAL212_1565 cytochrome c-type biogenesis protein CcmI; SMART: Tetratricopeptide repeat; cytochrome c-type biogenesis protein CcmI 1394291..1395625 Nitrosomonas sp. Is79A3 10933365 YP_004694516.1 CDS Nit79A3_1276 NC_015731.1 1395631 1396092 D PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: nit:NAL212_1566 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 1395631..1396092 Nitrosomonas sp. Is79A3 10933366 YP_004694517.1 CDS Nit79A3_1278 NC_015731.1 1397304 1397624 D PFAM: Transposase IS3/IS911; KEGG: nit:NAL212_0153 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1397304..1397624 Nitrosomonas sp. Is79A3 10933368 YP_004694518.1 CDS Nit79A3_1281 NC_015731.1 1399492 1399995 D KEGG: afe:Lferr_0146 hypothetical protein; hypothetical protein 1399492..1399995 Nitrosomonas sp. Is79A3 10933371 YP_004694519.1 CDS Nit79A3_1282 NC_015731.1 1399968 1400552 D KEGG: afe:Lferr_0145 transposase; hypothetical protein 1399968..1400552 Nitrosomonas sp. Is79A3 10933372 YP_004694520.1 CDS Nit79A3_1284 NC_015731.1 1402210 1403247 D KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase 1402210..1403247 Nitrosomonas sp. Is79A3 10933374 YP_004694521.1 CDS Nit79A3_1285 NC_015731.1 1403526 1404689 D KEGG: nit:NAL212_1232 two component transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; LuxR family transcriptional regulator 1403526..1404689 Nitrosomonas sp. Is79A3 10933375 YP_004694522.1 CDS Nit79A3_1287 NC_015731.1 1405888 1407351 R KEGG: nit:NAL212_1362 dynamin family protein; dynamin family protein complement(1405888..1407351) Nitrosomonas sp. Is79A3 10933377 YP_004694523.1 CDS Nit79A3_1288 NC_015731.1 1407805 1408518 D PFAM: Protein of unknown function DUF502; KEGG: eba:ebA5013 hypothetical protein; hypothetical protein 1407805..1408518 Nitrosomonas sp. Is79A3 10933378 YP_004694524.1 CDS Nit79A3_1289 NC_015731.1 1408553 1409590 R KEGG: nit:NAL212_1364 folate-binding protein YgfZ; TIGRFAM: Folate-binding, YgfZ; PFAM: Glycine cleavage T-protein, N-terminal; folate-binding protein YgfZ complement(1408553..1409590) Nitrosomonas sp. Is79A3 10933379 YP_004694525.1 CDS Nit79A3_1290 NC_015731.1 1409757 1410191 D KEGG: nit:NAL212_1365 hypothetical protein; hypothetical protein 1409757..1410191 Nitrosomonas sp. Is79A3 10933380 YP_004694526.1 CDS Nit79A3_1291 NC_015731.1 1410379 1410657 D hypothetical protein 1410379..1410657 Nitrosomonas sp. Is79A3 10933381 YP_004694527.1 CDS Nit79A3_1293 NC_015731.1 1411833 1414424 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: dar:Daro_1362 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1411833..1414424 Nitrosomonas sp. Is79A3 10933383 YP_004694528.1 CDS Nit79A3_1294 NC_015731.1 1414641 1416032 R KEGG: nmu:Nmul_A2728 phosphatase-like; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; Protein of unknown function DUF839, bacterial; PEP motif anchor domain-containing protein complement(1414641..1416032) Nitrosomonas sp. Is79A3 10933384 YP_004694529.1 CDS Nit79A3_1295 NC_015731.1 1416413 1416862 D KEGG: nit:NAL212_1366 hypothetical protein; hypothetical protein 1416413..1416862 Nitrosomonas sp. Is79A3 10933385 YP_004694530.1 CDS Nit79A3_1296 NC_015731.1 1416966 1418084 D PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; KEGG: amd:AMED_5743 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 1416966..1418084 Nitrosomonas sp. Is79A3 10933386 YP_004694531.1 CDS Nit79A3_1297 NC_015731.1 1418096 1418950 D KEGG: cai:Caci_0551 hypothetical protein; hypothetical protein 1418096..1418950 Nitrosomonas sp. Is79A3 10933387 YP_004694532.1 CDS Nit79A3_1298 NC_015731.1 1418962 1420146 D KEGG: dac:Daci_4508 hypothetical protein; hypothetical protein 1418962..1420146 Nitrosomonas sp. Is79A3 10933388 YP_004694533.1 CDS Nit79A3_1299 NC_015731.1 1420227 1420589 R KEGG: nit:NAL212_1367 hypothetical protein; hypothetical protein complement(1420227..1420589) Nitrosomonas sp. Is79A3 10933389 YP_004694534.1 CDS Nit79A3_1300 NC_015731.1 1420650 1421174 R KEGG: nit:NAL212_1368 hypothetical protein; hypothetical protein complement(1420650..1421174) Nitrosomonas sp. Is79A3 10933390 YP_004694535.1 CDS Nit79A3_1301 NC_015731.1 1421634 1422176 R KEGG: nit:NAL212_2278 hypothetical protein; hypothetical protein complement(1421634..1422176) Nitrosomonas sp. Is79A3 10933391 YP_004694536.1 CDS Nit79A3_1302 NC_015731.1 1422192 1422713 R KEGG: nit:NAL212_2279 hypothetical protein; hypothetical protein complement(1422192..1422713) Nitrosomonas sp. Is79A3 10933392 YP_004694537.1 CDS Nit79A3_1303 NC_015731.1 1423049 1423918 D PFAM: Phosphoribulokinase/uridine kinase; KEGG: nit:NAL212_1369 phosphoribulokinase; phosphoribulokinase/uridine kinase 1423049..1423918 Nitrosomonas sp. Is79A3 10933393 YP_004694538.1 CDS Nit79A3_1304 NC_015731.1 1424068 1426269 D PFAM: DNA helicase, UvrD/REP type; KEGG: nit:NAL212_1370 UvrD/REP helicase; UvrD/REP helicase 1424068..1426269 Nitrosomonas sp. Is79A3 10933394 YP_004694539.1 CDS Nit79A3_1305 NC_015731.1 1426483 1428414 R KEGG: gme:Gmet_0833 alpha amylase, catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; alpha amylase complement(1426483..1428414) Nitrosomonas sp. Is79A3 10933395 YP_004694540.1 CDS Nit79A3_1306 NC_015731.1 1428601 1429302 R PFAM: Ribonuclease T2; KEGG: mca:MCA1293 ribonuclease T2 family protein; ribonuclease T2 complement(1428601..1429302) Nitrosomonas sp. Is79A3 10933396 YP_004694541.1 CDS Nit79A3_1307 NC_015731.1 1429506 1430774 R KEGG: sdn:Sden_2175 hypothetical protein; hypothetical protein complement(1429506..1430774) Nitrosomonas sp. Is79A3 10933397 YP_004694542.1 CDS Nit79A3_1308 NC_015731.1 1430884 1431798 R KEGG: app:CAP2UW1_2764 peptidase C1A papain; PFAM: Peptidase C1A, papain C-terminal; SMART: Peptidase C1A, papain C-terminal; peptidase C1A papain complement(1430884..1431798) Nitrosomonas sp. Is79A3 10933398 YP_004694543.1 CDS Nit79A3_1309 NC_015731.1 1432005 1432325 R KEGG: nit:NAL212_1538 hypothetical protein; hypothetical protein complement(1432005..1432325) Nitrosomonas sp. Is79A3 10933399 YP_004694544.1 CDS Nit79A3_1310 NC_015731.1 1432612 1433595 R KEGG: nit:NAL212_1089 hypothetical protein; hypothetical protein complement(1432612..1433595) Nitrosomonas sp. Is79A3 10933400 YP_004694545.1 CDS Nit79A3_1311 NC_015731.1 1433640 1434590 R TIGRFAM: Homoserine kinase ThrB; HAMAP: Homoserine kinase; KEGG: nit:NAL212_1090 homoserine kinase; PFAM: Aminoglycoside phosphotransferase; Homoserine kinase complement(1433640..1434590) Nitrosomonas sp. Is79A3 10933401 YP_004694546.1 CDS Nit79A3_1312 NC_015731.1 1434674 1435075 R KEGG: nit:NAL212_1091 hypothetical protein; hypothetical protein complement(1434674..1435075) Nitrosomonas sp. Is79A3 10933402 YP_004694547.1 CDS Nit79A3_1313 NC_015731.1 1435133 1435852 R KEGG: nit:NAL212_1092 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00730; PFAM: Conserved hypothetical protein CHP00730; hypothetical protein complement(1435133..1435852) Nitrosomonas sp. Is79A3 10933403 YP_004694548.1 CDS Nit79A3_1314 NC_015731.1 1435868 1438615 D TIGRFAM: DNA polymerase 1; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: nit:NAL212_1093 DNA polymerase I; SMART: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; DNA polymerase I 1435868..1438615 Nitrosomonas sp. Is79A3 10933404 YP_004694549.1 CDS Nit79A3_1315 NC_015731.1 1438653 1441196 R KEGG: nit:NAL212_1094 ribonuclease, Rne/Rng family; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain; ribonuclease, Rne/Rng family complement(1438653..1441196) Nitrosomonas sp. Is79A3 10933405 YP_004694550.1 CDS Nit79A3_1316 NC_015731.1 1441674 1442687 D TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: nit:NAL212_1095 pseudouridine synthase, RluA family; SMART: RNA-binding S4; pseudouridine synthase 1441674..1442687 Nitrosomonas sp. Is79A3 10933406 YP_004694551.1 CDS Nit79A3_1317 NC_015731.1 1442734 1443378 R KEGG: nit:NAL212_1096 arylesterase; manually curated; PFAM: Lipase, GDSL; G-D-S-L family lipolytic protein complement(1442734..1443378) Nitrosomonas sp. Is79A3 10933407 YP_004694552.1 CDS Nit79A3_1318 NC_015731.1 1443377 1444063 D KEGG: nit:NAL212_1097 phosphonate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 1443377..1444063 Nitrosomonas sp. Is79A3 10933408 YP_004694553.1 CDS Nit79A3_1319 NC_015731.1 1444131 1446629 D PFAM: Protein of unknown function DUF214, permase predicted; KEGG: nit:NAL212_1098 hypothetical protein; hypothetical protein 1444131..1446629 Nitrosomonas sp. Is79A3 10933409 YP_004694554.1 CDS Nit79A3_1320 NC_015731.1 1446648 1447859 D TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; KEGG: nit:NAL212_1099 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 1446648..1447859 Nitrosomonas sp. Is79A3 10933410 YP_004694555.1 CDS Nit79A3_1321 NC_015731.1 1447941 1448735 D PFAM: Formate/nitrite transporter; KEGG: nit:NAL212_1100 formate/nitrite transporter; formate/nitrite transporter 1447941..1448735 Nitrosomonas sp. Is79A3 10933411 YP_004694556.1 CDS Nit79A3_1322 NC_015731.1 1448872 1450842 D PFAM: ATP-binding region, ATPase-like; KEGG: rpe:RPE_2484 ATPase domain-containing protein; ATPase 1448872..1450842 Nitrosomonas sp. Is79A3 10933412 YP_004694557.1 CDS Nit79A3_1323 NC_015731.1 1450902 1451483 D KEGG: rpe:RPE_2484 ATPase domain-containing protein; hypothetical protein 1450902..1451483 Nitrosomonas sp. Is79A3 10933413 YP_004694558.1 CDS Nit79A3_1324 NC_015731.1 1451916 1452854 R KEGG: nit:NAL212_3082 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(1451916..1452854) Nitrosomonas sp. Is79A3 10933414 YP_004694559.1 CDS Nit79A3_1325 NC_015731.1 1452878 1453021 R hypothetical protein complement(1452878..1453021) Nitrosomonas sp. Is79A3 10933415 YP_004694560.1 CDS Nit79A3_1326 NC_015731.1 1453503 1454324 D KEGG: bja:blr0248 hypothetical protein; hypothetical protein 1453503..1454324 Nitrosomonas sp. Is79A3 10933416 YP_004694561.1 CDS Nit79A3_1327 NC_015731.1 1454321 1455982 D PFAM: Amidohydrolase 1; KEGG: fri:FraEuI1c_6392 amidohydrolase; amidohydrolase 1454321..1455982 Nitrosomonas sp. Is79A3 10933417 YP_004694562.1 CDS Nit79A3_1328 NC_015731.1 1456231 1456656 D KEGG: nit:NAL212_1102 hypothetical protein; hypothetical protein 1456231..1456656 Nitrosomonas sp. Is79A3 10933418 YP_004694563.1 CDS Nit79A3_1329 NC_015731.1 1456821 1458131 D KEGG: sus:Acid_1970 hypothetical protein; hypothetical protein 1456821..1458131 Nitrosomonas sp. Is79A3 10933419 YP_004694564.1 CDS Nit79A3_1330 NC_015731.1 1458377 1458769 R KEGG: nit:NAL212_2699 hypothetical protein; hypothetical protein complement(1458377..1458769) Nitrosomonas sp. Is79A3 10933420 YP_004694565.1 CDS Nit79A3_1331 NC_015731.1 1459142 1459312 R hypothetical protein complement(1459142..1459312) Nitrosomonas sp. Is79A3 10933421 YP_004694566.1 CDS Nit79A3_1332 NC_015731.1 1459717 1460382 R hypothetical protein complement(1459717..1460382) Nitrosomonas sp. Is79A3 10933422 YP_004694567.1 CDS Nit79A3_1333 NC_015731.1 1460923 1461546 D KEGG: nit:NAL212_1903 hypothetical protein; hypothetical protein 1460923..1461546 Nitrosomonas sp. Is79A3 10933423 YP_004694568.1 CDS Nit79A3_1334 NC_015731.1 1461648 1462499 D PFAM: Alpha/beta hydrolase fold-1; KEGG: bba:Bd1031 phospholipase/carboxylesterase; alpha/beta hydrolase 1461648..1462499 Nitrosomonas sp. Is79A3 10933424 YP_004694569.1 CDS Nit79A3_1335 NC_015731.1 1462526 1464502 R KEGG: nde:NIDE4188 hypothetical protein; hypothetical protein complement(1462526..1464502) Nitrosomonas sp. Is79A3 10933425 YP_004694570.1 CDS Nit79A3_1336 NC_015731.1 1464516 1465028 R KEGG: lic:LIC12227 hypothetical protein; hypothetical protein complement(1464516..1465028) Nitrosomonas sp. Is79A3 10933426 YP_004694571.1 CDS Nit79A3_1337 NC_015731.1 1465306 1466265 R PFAM: Alpha/beta hydrolase fold-1; KEGG: nit:NAL212_1704 alpha/beta hydrolase fold protein; alpha/beta hydrolase complement(1465306..1466265) Nitrosomonas sp. Is79A3 10933427 YP_004694572.1 CDS Nit79A3_1338 NC_015731.1 1466265 1466666 R KEGG: nit:NAL212_1705 hypothetical protein; hypothetical protein complement(1466265..1466666) Nitrosomonas sp. Is79A3 10933428 YP_004694573.1 CDS Nit79A3_1339 NC_015731.1 1466794 1468041 R KEGG: cts:Ctha_1456 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(1466794..1468041) Nitrosomonas sp. Is79A3 10933429 YP_004694574.1 CDS Nit79A3_1340 NC_015731.1 1468611 1468898 D KEGG: nit:NAL212_2324 hypothetical protein; hypothetical protein 1468611..1468898 Nitrosomonas sp. Is79A3 10933430 YP_004694575.1 CDS Nit79A3_1341 NC_015731.1 1469018 1469764 R KEGG: nit:NAL212_2637 hypothetical protein; hypothetical protein complement(1469018..1469764) Nitrosomonas sp. Is79A3 10933431 YP_004694576.1 CDS Nit79A3_1343 NC_015731.1 1470216 1471043 R PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein complement(1470216..1471043) Nitrosomonas sp. Is79A3 10933433 YP_004694577.1 CDS Nit79A3_1344 NC_015731.1 1471176 1471499 D PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein 1471176..1471499 Nitrosomonas sp. Is79A3 10933434 YP_004694578.1 CDS Nit79A3_1345 NC_015731.1 1471496 1472404 D KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 1471496..1472404 Nitrosomonas sp. Is79A3 10933435 YP_004694579.1 CDS Nit79A3_1346 NC_015731.1 1472372 1472500 R hypothetical protein complement(1472372..1472500) Nitrosomonas sp. Is79A3 10933436 YP_004694580.1 CDS Nit79A3_1347 NC_015731.1 1472743 1475673 R TIGRFAM: Aconitase/iron regulatory protein 2; KEGG: nit:NAL212_2041 aconitate hydratase 1; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel; aconitate hydratase 1 complement(1472743..1475673) Nitrosomonas sp. Is79A3 10933437 YP_004694581.1 CDS Nit79A3_1348 NC_015731.1 1476479 1477963 R KEGG: nit:NAL212_1473 hypothetical protein; hypothetical protein complement(1476479..1477963) Nitrosomonas sp. Is79A3 10933441 YP_004694582.1 CDS Nit79A3_1349 NC_015731.1 1478217 1478972 R KEGG: nit:NAL212_0495 spermine synthase; spermine synthase complement(1478217..1478972) Nitrosomonas sp. Is79A3 10933442 YP_004694583.1 CDS Nit79A3_1350 NC_015731.1 1478969 1479214 R KEGG: tmz:Tmz1t_2249 NADH ubiquinone oxidoreductase 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit complement(1478969..1479214) Nitrosomonas sp. Is79A3 10933443 YP_004694584.1 CDS Nit79A3_1351 NC_015731.1 1479204 1479935 R PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; KEGG: mca:MCA2725 NAD-reducing hydrogenase, gamma subunit; NADH:ubiquinone oxidoreductase subunit G, iron-sulfur binding protein complement(1479204..1479935) Nitrosomonas sp. Is79A3 10933444 YP_004694585.1 CDS Nit79A3_1352 NC_015731.1 1479935 1481701 R KEGG: gca:Galf_1581 respiratory-chain NADH dehydrogenase domain 51 kDa subunit; manually curated; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit complement(1479935..1481701) Nitrosomonas sp. Is79A3 10933445 YP_004694586.1 CDS Nit79A3_1353 NC_015731.1 1481963 1482655 D KEGG: lch:Lcho_2325 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1481963..1482655 Nitrosomonas sp. Is79A3 10933446 YP_004694587.1 CDS Nit79A3_1354 NC_015731.1 1482720 1483388 R PFAM: Protein of unknown function DUF1614; KEGG: nhl:Nhal_3859 protein of unknown function DUF1614; hypothetical protein complement(1482720..1483388) Nitrosomonas sp. Is79A3 10933447 YP_004694588.1 CDS Nit79A3_1355 NC_015731.1 1483732 1483920 R KEGG: gbm:Gbem_0768 hypothetical protein; hypothetical protein complement(1483732..1483920) Nitrosomonas sp. Is79A3 10933448 YP_004694589.1 CDS Nit79A3_1356 NC_015731.1 1483917 1484489 R KEGG: app:CAP2UW1_0348 hypothetical protein; hypothetical protein complement(1483917..1484489) Nitrosomonas sp. Is79A3 10933449 YP_004694590.1 CDS Nit79A3_1357 NC_015731.1 1484489 1484815 R hypothetical protein complement(1484489..1484815) Nitrosomonas sp. Is79A3 10933450 YP_004694591.1 CDS Nit79A3_1358 NC_015731.1 1484822 1485361 R hypothetical protein complement(1484822..1485361) Nitrosomonas sp. Is79A3 10933451 YP_004694592.1 CDS Nit79A3_1359 NC_015731.1 1485451 1486092 R KEGG: ctt:CtCNB1_2565 probable mannitol operon repressor; hypothetical protein complement(1485451..1486092) Nitrosomonas sp. Is79A3 10933452 YP_004694593.1 CDS Nit79A3_1360 NC_015731.1 1486421 1489819 R manually curated; PFAM: Peptidase M28; PDZ/DHR/GLGF; KEGG: nit:NAL212_2064 peptidase M28; SMART: PDZ/DHR/GLGF; peptidase M28 complement(1486421..1489819) Nitrosomonas sp. Is79A3 10933453 YP_004694594.1 CDS Nit79A3_1361 NC_015731.1 1489846 1489950 D manually curated; hypothetical protein 1489846..1489950 Nitrosomonas sp. Is79A3 10933454 YP_004694595.1 CDS Nit79A3_1363 NC_015731.1 1490237 1491271 R KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase complement(1490237..1491271) Nitrosomonas sp. Is79A3 10933456 YP_004694596.1 CDS Nit79A3_1364 NC_015731.1 1491314 1494226 D KEGG: noc:Noc_1846 hypothetical protein; hypothetical protein 1491314..1494226 Nitrosomonas sp. Is79A3 10933457 YP_004694597.1 CDS Nit79A3_1365 NC_015731.1 1494284 1495384 D PFAM: WD40-like Beta Propeller; KEGG: nit:NAL212_2061 WD40-like beta propeller containing protein; hypothetical protein 1494284..1495384 Nitrosomonas sp. Is79A3 10933458 YP_004694598.1 CDS Nit79A3_1366 NC_015731.1 1495759 1496568 D KEGG: nit:NAL212_2071 hypothetical protein; hypothetical protein 1495759..1496568 Nitrosomonas sp. Is79A3 10933459 YP_004694599.1 CDS Nit79A3_1367 NC_015731.1 1496695 1497747 D PFAM: Haemolysin-type calcium-binding region; KEGG: nit:NAL212_2070 hemolysin-type calcium-binding region; Hemolysin-type calcium-binding protein 1496695..1497747 Nitrosomonas sp. Is79A3 10933460 YP_004694600.1 CDS Nit79A3_1368 NC_015731.1 1497826 1499160 R KEGG: nit:NAL212_2060 hypothetical protein; hypothetical protein complement(1497826..1499160) Nitrosomonas sp. Is79A3 10933461 YP_004694601.1 CDS Nit79A3_1369 NC_015731.1 1499180 1499629 R KEGG: nit:NAL212_2059 hypothetical protein; hypothetical protein complement(1499180..1499629) Nitrosomonas sp. Is79A3 10933462 YP_004694602.1 CDS Nit79A3_1370 NC_015731.1 1499802 1501265 D TIGRFAM: IMP dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; KEGG: nit:NAL212_2058 inosine-5'-monophosphate dehydrogenase; SMART: Cystathionine beta-synthase, core; inosine-5'-monophosphate dehydrogenase 1499802..1501265 Nitrosomonas sp. Is79A3 10933463 YP_004694603.1 CDS Nit79A3_1371 NC_015731.1 1501278 1502840 D TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; HAMAP: GMP synthase [glutamine-hydrolyzing]; KEGG: nit:NAL212_2057 GMP synthase, large subunit; PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; GMP synthase 1501278..1502840 Nitrosomonas sp. Is79A3 10933464 YP_004694604.1 CDS Nit79A3_1372 NC_015731.1 1503191 1504387 D PFAM: Integrase, catalytic core, phage; KEGG: ajs:Ajs_2546 phage integrase; integrase 1503191..1504387 Nitrosomonas sp. Is79A3 10933465 YP_004694605.1 CDS Nit79A3_1373 NC_015731.1 1504374 1504607 R PFAM: Prophage CP4-57 regulatory; KEGG: maq:Maqu_1725 phage transcriptional regulator, AlpA; prophage CP4-57 regulator complement(1504374..1504607) Nitrosomonas sp. Is79A3 10933466 YP_004694606.1 CDS Nit79A3_1374 NC_015731.1 1504622 1504846 R hypothetical protein complement(1504622..1504846) Nitrosomonas sp. Is79A3 10933467 YP_004694607.1 CDS Nit79A3_1375 NC_015731.1 1504849 1505175 R KEGG: xau:Xaut_3599 hypothetical protein; hypothetical protein complement(1504849..1505175) Nitrosomonas sp. Is79A3 10933468 YP_004694608.1 CDS Nit79A3_1376 NC_015731.1 1505175 1505378 R hypothetical protein complement(1505175..1505378) Nitrosomonas sp. Is79A3 10933469 YP_004694609.1 CDS Nit79A3_1377 NC_015731.1 1505371 1505598 R hypothetical protein complement(1505371..1505598) Nitrosomonas sp. Is79A3 10933470 YP_004694610.1 CDS Nit79A3_1378 NC_015731.1 1505582 1505770 R hypothetical protein complement(1505582..1505770) Nitrosomonas sp. Is79A3 10933471 YP_004694611.1 CDS Nit79A3_1379 NC_015731.1 1505930 1506304 R hypothetical protein complement(1505930..1506304) Nitrosomonas sp. Is79A3 10933472 YP_004694612.1 CDS Nit79A3_1380 NC_015731.1 1506347 1506874 R KEGG: afr:AFE_1128 hypothetical protein; hypothetical protein complement(1506347..1506874) Nitrosomonas sp. Is79A3 10933473 YP_004694613.1 CDS Nit79A3_1381 NC_015731.1 1506894 1507358 R KEGG: nmu:Nmul_A2227 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding; single-strand binding protein complement(1506894..1507358) Nitrosomonas sp. Is79A3 10933474 YP_004694614.1 CDS Nit79A3_1383 NC_015731.1 1507593 1507865 R hypothetical protein complement(1507593..1507865) Nitrosomonas sp. Is79A3 10933476 YP_004694615.1 CDS Nit79A3_1384 NC_015731.1 1507876 1508256 R KEGG: pap:PSPA7_2371 hypothetical protein; hypothetical protein complement(1507876..1508256) Nitrosomonas sp. Is79A3 10933477 YP_004694616.1 CDS Nit79A3_1385 NC_015731.1 1508249 1508437 R hypothetical protein complement(1508249..1508437) Nitrosomonas sp. Is79A3 10933478 YP_004694617.1 CDS Nit79A3_1386 NC_015731.1 1508630 1509244 R KEGG: hypothetical protein; hypothetical protein complement(1508630..1509244) Nitrosomonas sp. Is79A3 10933479 YP_004694618.1 CDS Nit79A3_1387 NC_015731.1 1509237 1509800 R KEGG: pst:PSPTO_4056 hypothetical protein; hypothetical protein complement(1509237..1509800) Nitrosomonas sp. Is79A3 10933480 YP_004694619.1 CDS Nit79A3_1388 NC_015731.1 1509787 1510428 R KEGG: sml:Smlt1913 hypothetical protein; hypothetical protein complement(1509787..1510428) Nitrosomonas sp. Is79A3 10933481 YP_004694620.1 CDS Nit79A3_1389 NC_015731.1 1510421 1510588 R hypothetical protein complement(1510421..1510588) Nitrosomonas sp. Is79A3 10933482 YP_004694621.1 CDS Nit79A3_1390 NC_015731.1 1510592 1512310 R KEGG: bpt:Bpet0950 RecF protein; RecF protein complement(1510592..1512310) Nitrosomonas sp. Is79A3 10933483 YP_004694622.1 CDS Nit79A3_1391 NC_015731.1 1512313 1512615 R hypothetical protein complement(1512313..1512615) Nitrosomonas sp. Is79A3 10933484 YP_004694623.1 CDS Nit79A3_1392 NC_015731.1 1512618 1513505 R PFAM: exonuclease, RdgC; KEGG: bph:Bphy_4738 recombination associated protein; exonuclease RdgC complement(1512618..1513505) Nitrosomonas sp. Is79A3 10933485 YP_004694624.1 CDS Nit79A3_1393 NC_015731.1 1513521 1514093 R hypothetical protein complement(1513521..1514093) Nitrosomonas sp. Is79A3 10933486 YP_004694625.1 CDS Nit79A3_1394 NC_015731.1 1514096 1515076 R KEGG: bgl:bglu_1g15310 hypothetical protein; hypothetical protein complement(1514096..1515076) Nitrosomonas sp. Is79A3 10933487 YP_004694626.1 CDS Nit79A3_1395 NC_015731.1 1515082 1515897 R manually curated; KEGG: bgl:bglu_1g15320 hypothetical protein; hypothetical protein complement(1515082..1515897) Nitrosomonas sp. Is79A3 10933488 YP_004694627.1 CDS Nit79A3_1396 NC_015731.1 1515991 1516140 R hypothetical protein complement(1515991..1516140) Nitrosomonas sp. Is79A3 10933489 YP_004694628.1 CDS Nit79A3_1397 NC_015731.1 1516137 1516454 R hypothetical protein complement(1516137..1516454) Nitrosomonas sp. Is79A3 10933490 YP_004694629.1 CDS Nit79A3_1398 NC_015731.1 1516451 1516597 R hypothetical protein complement(1516451..1516597) Nitrosomonas sp. Is79A3 10933491 YP_004694630.1 CDS Nit79A3_1399 NC_015731.1 1516792 1517877 R PFAM: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ complement(1516792..1517877) Nitrosomonas sp. Is79A3 10933492 YP_004694631.1 CDS Nit79A3_1400 NC_015731.1 1517899 1518675 R KEGG: mep:MPQ_2006 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(1517899..1518675) Nitrosomonas sp. Is79A3 10933493 YP_004694632.1 CDS Nit79A3_1401 NC_015731.1 1518772 1519134 R KEGG: net:Neut_1484 phage repressor; phage repressor complement(1518772..1519134) Nitrosomonas sp. Is79A3 10933494 YP_004694633.1 CDS Nit79A3_1402 NC_015731.1 1519222 1519476 D manually curated; KEGG: net:Neut_1483 hypothetical protein; hypothetical protein 1519222..1519476 Nitrosomonas sp. Is79A3 10933495 YP_004694634.1 CDS Nit79A3_1403 NC_015731.1 1519518 1520117 D KEGG: axy:AXYL_02049 hypothetical protein; hypothetical protein 1519518..1520117 Nitrosomonas sp. Is79A3 10933496 YP_004694635.1 CDS Nit79A3_1404 NC_015731.1 1520381 1521202 D KEGG: rpf:Rpic12D_3448 hypothetical protein; hypothetical protein 1520381..1521202 Nitrosomonas sp. Is79A3 10933497 YP_004694636.1 CDS Nit79A3_1405 NC_015731.1 1521174 1521764 D KEGG: lhk:LHK_01787 hypothetical protein; hypothetical protein 1521174..1521764 Nitrosomonas sp. Is79A3 10933498 YP_004694637.1 CDS Nit79A3_1406 NC_015731.1 1522077 1522427 D hypothetical protein 1522077..1522427 Nitrosomonas sp. Is79A3 10933499 YP_004694638.1 CDS Nit79A3_1407 NC_015731.1 1522432 1522764 D hypothetical protein 1522432..1522764 Nitrosomonas sp. Is79A3 10933500 YP_004694639.1 CDS Nit79A3_1408 NC_015731.1 1522779 1522988 D hypothetical protein 1522779..1522988 Nitrosomonas sp. Is79A3 10933501 YP_004694640.1 CDS Nit79A3_1409 NC_015731.1 1522992 1523684 D PFAM: DNA methylase N-4/N-6; KEGG: seu:SEQ_0158 phage DNA methylase; DNA methylase N-4/N-6 domain-containing protein 1522992..1523684 Nitrosomonas sp. Is79A3 10933502 YP_004694641.1 CDS Nit79A3_1410 NC_015731.1 1523681 1524388 D hypothetical protein 1523681..1524388 Nitrosomonas sp. Is79A3 10933503 YP_004694642.1 CDS Nit79A3_1411 NC_015731.1 1524399 1524809 D hypothetical protein 1524399..1524809 Nitrosomonas sp. Is79A3 10933504 YP_004694643.1 CDS Nit79A3_1412 NC_015731.1 1524812 1525540 D PFAM: Phage antirepressor protein; Phage regulatory protein, Rha-like; KEGG: btr:Btr_0527 hypothetical protein; phage antirepressor protein 1524812..1525540 Nitrosomonas sp. Is79A3 10933505 YP_004694644.1 CDS Nit79A3_1413 NC_015731.1 1526017 1526343 D hypothetical protein 1526017..1526343 Nitrosomonas sp. Is79A3 10933506 YP_004694645.1 CDS Nit79A3_1414 NC_015731.1 1526361 1526732 D hypothetical protein 1526361..1526732 Nitrosomonas sp. Is79A3 10933507 YP_004694646.1 CDS Nit79A3_1415 NC_015731.1 1526713 1526907 D hypothetical protein 1526713..1526907 Nitrosomonas sp. Is79A3 10933508 YP_004694647.1 CDS Nit79A3_1416 NC_015731.1 1526904 1527398 D KEGG: ect:ECIAI39_2692 hypothetical protein; hypothetical protein 1526904..1527398 Nitrosomonas sp. Is79A3 10933509 YP_004694648.1 CDS Nit79A3_1417 NC_015731.1 1527456 1528109 D SMART: Helix-turn-helix type 3; KEGG: ajs:Ajs_0932 XRE family transcriptional regulator; helix-turn-helix domain-containing protein 1527456..1528109 Nitrosomonas sp. Is79A3 10933510 YP_004694649.1 CDS Nit79A3_1418 NC_015731.1 1528116 1528979 D KEGG: ajs:Ajs_0939 hypothetical protein; hypothetical protein 1528116..1528979 Nitrosomonas sp. Is79A3 10933511 YP_004694650.1 CDS Nit79A3_1419 NC_015731.1 1528972 1530492 D KEGG: bvi:Bcep1808_7700 hypothetical protein; hypothetical protein 1528972..1530492 Nitrosomonas sp. Is79A3 10933512 YP_004694651.1 CDS Nit79A3_1420 NC_015731.1 1530470 1530838 D PFAM: Phosphopantetheine-binding; KEGG: aae:aq_1717a acyl carrier protein; phosphopantetheine-binding protein 1530470..1530838 Nitrosomonas sp. Is79A3 10933513 YP_004694652.1 CDS Nit79A3_1421 NC_015731.1 1530854 1531219 D PFAM: DeoxyUTP pyrophosphatase domain; KEGG: tkm:TK90_2717 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; deoxyUTP pyrophosphatase 1530854..1531219 Nitrosomonas sp. Is79A3 10933514 YP_004694653.1 CDS Nit79A3_1422 NC_015731.1 1531365 1532636 R KEGG: dak:DaAHT2_2600 hypothetical protein; hypothetical protein complement(1531365..1532636) Nitrosomonas sp. Is79A3 10933515 YP_004694654.1 CDS Nit79A3_1423 NC_015731.1 1532671 1533411 R PFAM: Phage Gp37Gp68; KEGG: rpf:Rpic12D_2516 Gp37Gp68 family protein; Gp37Gp68 family protein complement(1532671..1533411) Nitrosomonas sp. Is79A3 10933516 YP_004694655.1 CDS Nit79A3_1424 NC_015731.1 1533463 1533936 R KEGG: rru:Rru_A0637 hypothetical protein; hypothetical protein complement(1533463..1533936) Nitrosomonas sp. Is79A3 10933517 YP_004694656.1 CDS Nit79A3_1425 NC_015731.1 1533933 1534151 R hypothetical protein complement(1533933..1534151) Nitrosomonas sp. Is79A3 10933518 YP_004694657.1 CDS Nit79A3_1426 NC_015731.1 1534262 1534591 R KEGG: bgl:bglu_1g15190 hypothetical protein; hypothetical protein complement(1534262..1534591) Nitrosomonas sp. Is79A3 10933519 YP_004694658.1 CDS Nit79A3_1427 NC_015731.1 1534588 1535001 R KEGG: slt:Slit_0211 hypothetical protein; hypothetical protein complement(1534588..1535001) Nitrosomonas sp. Is79A3 10933520 YP_004694659.1 CDS Nit79A3_1428 NC_015731.1 1535013 1535399 R PFAM: Mor transcription activator; KEGG: nit:NAL212_3027 Mor transcription activator domain-containing protein; Mor transcription activator domain-containing protein complement(1535013..1535399) Nitrosomonas sp. Is79A3 10933521 YP_004694660.1 CDS Nit79A3_1429 NC_015731.1 1535887 1536540 D KEGG: dar:Daro_1917 hypothetical protein; hypothetical protein 1535887..1536540 Nitrosomonas sp. Is79A3 10933522 YP_004694661.1 CDS Nit79A3_1430 NC_015731.1 1536557 1536934 D hypothetical protein 1536557..1536934 Nitrosomonas sp. Is79A3 10933523 YP_004694662.1 CDS Nit79A3_1431 NC_015731.1 1537064 1539085 R PFAM: Lytic transglycosylase-like, catalytic; KEGG: bvi:Bcep1808_7745 lytic transglycosylase, catalytic; lytic transglycosylase complement(1537064..1539085) Nitrosomonas sp. Is79A3 10933524 YP_004694663.1 CDS Nit79A3_1432 NC_015731.1 1539094 1540005 R KEGG: ajs:Ajs_0938 hypothetical protein; hypothetical protein complement(1539094..1540005) Nitrosomonas sp. Is79A3 10933525 YP_004694664.1 CDS Nit79A3_1433 NC_015731.1 1540009 1541664 R KEGG: bvi:Bcep1808_7747 hypothetical protein; hypothetical protein complement(1540009..1541664) Nitrosomonas sp. Is79A3 10933526 YP_004694665.1 CDS Nit79A3_1434 NC_015731.1 1541828 1542676 D KEGG: bvi:Bcep1808_7774 hypothetical protein; hypothetical protein 1541828..1542676 Nitrosomonas sp. Is79A3 10933527 YP_004694666.1 CDS Nit79A3_1435 NC_015731.1 1542685 1543410 D KEGG: bvi:Bcep1808_7773 hypothetical protein; hypothetical protein 1542685..1543410 Nitrosomonas sp. Is79A3 10933528 YP_004694667.1 CDS Nit79A3_1436 NC_015731.1 1543410 1543742 D hypothetical protein 1543410..1543742 Nitrosomonas sp. Is79A3 10933529 YP_004694668.1 CDS Nit79A3_1437 NC_015731.1 1543739 1544227 D KEGG: bvi:Bcep1808_7772 hypothetical protein; hypothetical protein 1543739..1544227 Nitrosomonas sp. Is79A3 10933530 YP_004694669.1 CDS Nit79A3_1438 NC_015731.1 1544239 1544571 D KEGG: bvi:Bcep1808_7767 hypothetical protein; hypothetical protein 1544239..1544571 Nitrosomonas sp. Is79A3 10933531 YP_004694670.1 CDS Nit79A3_1439 NC_015731.1 1544581 1545666 D KEGG: ajs:Ajs_0933 hypothetical protein; hypothetical protein 1544581..1545666 Nitrosomonas sp. Is79A3 10933532 YP_004694671.1 CDS Nit79A3_1440 NC_015731.1 1545674 1546162 D KEGG: bvi:Bcep1808_7765 hypothetical protein; hypothetical protein 1545674..1546162 Nitrosomonas sp. Is79A3 10933533 YP_004694672.1 CDS Nit79A3_1441 NC_015731.1 1546293 1547987 D KEGG: bvi:Bcep1808_7737 hypothetical protein; hypothetical protein 1546293..1547987 Nitrosomonas sp. Is79A3 10933534 YP_004694673.1 CDS Nit79A3_1442 NC_015731.1 1548045 1548551 D KEGG: uma:UM05181.1 hypothetical protein; hypothetical protein 1548045..1548551 Nitrosomonas sp. Is79A3 10933535 YP_004694674.1 CDS Nit79A3_1443 NC_015731.1 1548558 1550423 D KEGG: bvi:Bcep1808_7735 hypothetical protein; hypothetical protein 1548558..1550423 Nitrosomonas sp. Is79A3 10933536 YP_004694675.1 CDS Nit79A3_1444 NC_015731.1 1550457 1551155 D KEGG: bvi:Bcep1808_7734 hypothetical protein; hypothetical protein 1550457..1551155 Nitrosomonas sp. Is79A3 10933537 YP_004694676.1 CDS Nit79A3_1445 NC_015731.1 1551234 1552040 D KEGG: ajs:Ajs_0937 hypothetical protein; hypothetical protein 1551234..1552040 Nitrosomonas sp. Is79A3 10933538 YP_004694677.1 CDS Nit79A3_1446 NC_015731.1 1552369 1553148 D KEGG: bvi:Bcep1808_7732 hypothetical protein; hypothetical protein 1552369..1553148 Nitrosomonas sp. Is79A3 10933539 YP_004694678.1 CDS Nit79A3_1447 NC_015731.1 1553132 1553356 D hypothetical protein 1553132..1553356 Nitrosomonas sp. Is79A3 10933540 YP_004694679.1 CDS Nit79A3_1448 NC_015731.1 1553359 1553670 D hypothetical protein 1553359..1553670 Nitrosomonas sp. Is79A3 10933541 YP_004694680.1 CDS Nit79A3_1449 NC_015731.1 1553674 1554138 D PFAM: Peptidase M15A, C-terminal; KEGG: ppw:PputW619_1627 peptidase M15A; peptidase M15A 1553674..1554138 Nitrosomonas sp. Is79A3 10933542 YP_004694681.1 CDS Nit79A3_1450 NC_015731.1 1554154 1554684 D hypothetical protein 1554154..1554684 Nitrosomonas sp. Is79A3 10933543 YP_004694682.1 CDS Nit79A3_1451 NC_015731.1 1554681 1554998 D hypothetical protein 1554681..1554998 Nitrosomonas sp. Is79A3 10933544 YP_004694683.1 CDS Nit79A3_1452 NC_015731.1 1554998 1555579 D KEGG: cai:Caci_6403 Ig family protein; hypothetical protein 1554998..1555579 Nitrosomonas sp. Is79A3 10933545 YP_004694684.1 CDS Nit79A3_1453 NC_015731.1 1555593 1556624 D hypothetical protein 1555593..1556624 Nitrosomonas sp. Is79A3 10933546 YP_004694685.1 CDS Nit79A3_1454 NC_015731.1 1556621 1556923 D hypothetical protein 1556621..1556923 Nitrosomonas sp. Is79A3 10933547 YP_004694686.1 CDS Nit79A3_1455 NC_015731.1 1556946 1557518 D KEGG: lic:LIC10163 hypothetical protein; hypothetical protein 1556946..1557518 Nitrosomonas sp. Is79A3 10933548 YP_004694687.1 CDS Nit79A3_1456 NC_015731.1 1557654 1558154 D KEGG: bvi:Bcep1808_7743 hypothetical protein; hypothetical protein 1557654..1558154 Nitrosomonas sp. Is79A3 10933549 YP_004694688.1 CDS Nit79A3_1457 NC_015731.1 1558189 1558545 D KEGG: fri:FraEuI1c_5846 polysaccharide deacetylase; hypothetical protein 1558189..1558545 Nitrosomonas sp. Is79A3 10933550 YP_004694689.1 CDS Nit79A3_1458 NC_015731.1 1558555 1558941 D KEGG: bvi:Bcep1808_7742 hypothetical protein; hypothetical protein 1558555..1558941 Nitrosomonas sp. Is79A3 10933551 YP_004694690.1 CDS Nit79A3_1459 NC_015731.1 1558952 1559860 D KEGG: bvi:Bcep1808_7740 hypothetical protein; hypothetical protein 1558952..1559860 Nitrosomonas sp. Is79A3 10933552 YP_004694691.1 CDS Nit79A3_1460 NC_015731.1 1559865 1560371 D KEGG: bvi:Bcep1808_7739 hypothetical protein; hypothetical protein 1559865..1560371 Nitrosomonas sp. Is79A3 10933553 YP_004694692.1 CDS Nit79A3_1461 NC_015731.1 1560453 1560938 D KEGG: bvi:Bcep1808_7738 hypothetical protein; hypothetical protein 1560453..1560938 Nitrosomonas sp. Is79A3 10933554 YP_004694693.1 CDS Nit79A3_1462 NC_015731.1 1560935 1561405 D KEGG: vok:COSY_0067 nuclease; PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like); nuclease 1560935..1561405 Nitrosomonas sp. Is79A3 10933555 YP_004694694.1 CDS Nit79A3_1463 NC_015731.1 1561520 1563385 D KEGG: bvi:Bcep1808_7755 hypothetical protein; hypothetical protein 1561520..1563385 Nitrosomonas sp. Is79A3 10933556 YP_004694695.1 CDS Nit79A3_1464 NC_015731.1 1563392 1563763 D KEGG: rcp:RCAP_rcc00984 hypothetical protein; hypothetical protein 1563392..1563763 Nitrosomonas sp. Is79A3 10933557 YP_004694696.1 CDS Nit79A3_1465 NC_015731.1 1563760 1565643 D KEGG: mxa:MXAN_4488 hypothetical protein; hypothetical protein 1563760..1565643 Nitrosomonas sp. Is79A3 10933558 YP_004694697.1 CDS Nit79A3_1466 NC_015731.1 1565640 1567097 D KEGG: afe:Lferr_0235 hypothetical protein; hypothetical protein 1565640..1567097 Nitrosomonas sp. Is79A3 10933559 YP_004694698.1 CDS Nit79A3_1467 NC_015731.1 1567129 1567839 R KEGG: tcx:Tcr_1420 hypothetical protein; hypothetical protein complement(1567129..1567839) Nitrosomonas sp. Is79A3 10933560 YP_004694699.1 CDS Nit79A3_1468 NC_015731.1 1567933 1568322 R PFAM: Uncharacterised protein family UPF0150; KEGG: axy:AXYL_04720 hypothetical protein; hypothetical protein complement(1567933..1568322) Nitrosomonas sp. Is79A3 10933561 YP_004694700.1 CDS Nit79A3_1469 NC_015731.1 1568333 1568620 R PFAM: YcfA-like; KEGG: bpe:BP0939 hypothetical protein; hypothetical protein complement(1568333..1568620) Nitrosomonas sp. Is79A3 10933562 YP_004694701.1 CDS Nit79A3_1470 NC_015731.1 1568647 1575048 D KEGG: bvi:Bcep1808_7753 SNF2-related protein; PFAM: DNA methylase, adenine-specific; SMART: DEAD-like helicase, N-terminal; N-6 DNA methylase 1568647..1575048 Nitrosomonas sp. Is79A3 10933563 YP_004694702.1 CDS Nit79A3_1471 NC_015731.1 1575063 1575479 D KEGG: bvi:Bcep1808_7752 hypothetical protein; hypothetical protein 1575063..1575479 Nitrosomonas sp. Is79A3 10933564 YP_004694703.1 CDS Nit79A3_1472 NC_015731.1 1575858 1576868 D KEGG: bac:BamMC406_3185 hypothetical protein; hypothetical protein 1575858..1576868 Nitrosomonas sp. Is79A3 10933565 YP_004694704.1 CDS Nit79A3_1473 NC_015731.1 1577030 1577458 R KEGG: nit:NAL212_1769 hypothetical protein; hypothetical protein complement(1577030..1577458) Nitrosomonas sp. Is79A3 10933566 YP_004694705.1 CDS Nit79A3_1474 NC_015731.1 1577808 1578104 D KEGG: bvi:Bcep1808_7666 hypothetical protein; hypothetical protein 1577808..1578104 Nitrosomonas sp. Is79A3 10933567 YP_004694706.1 CDS Nit79A3_1475 NC_015731.1 1578106 1579599 D KEGG: bvi:Bcep1808_7665 hypothetical protein; hypothetical protein 1578106..1579599 Nitrosomonas sp. Is79A3 10933568 YP_004694707.1 CDS Nit79A3_1476 NC_015731.1 1579600 1580310 D KEGG: bvi:Bcep1808_7775 hypothetical protein; hypothetical protein 1579600..1580310 Nitrosomonas sp. Is79A3 10933569 YP_004694708.1 CDS Nit79A3_1477 NC_015731.1 1580307 1580948 D KEGG: pct:PC1_2656 tail fiber repeat 2 protein; tail fiber repeat 2 protein 1580307..1580948 Nitrosomonas sp. Is79A3 10933570 YP_004694709.1 CDS Nit79A3_1478 NC_015731.1 1580963 1581289 D hypothetical protein 1580963..1581289 Nitrosomonas sp. Is79A3 10933571 YP_004694710.1 CDS Nit79A3_1479 NC_015731.1 1581289 1582218 D KEGG: sit:TM1040_1287 secreted serine protease; secreted serine protease 1581289..1582218 Nitrosomonas sp. Is79A3 10933572 YP_004694711.1 CDS Nit79A3_1480 NC_015731.1 1582221 1582397 D hypothetical protein 1582221..1582397 Nitrosomonas sp. Is79A3 10933573 YP_004694712.1 CDS Nit79A3_1481 NC_015731.1 1582397 1582852 D KEGG: sit:TM1040_1286 hypothetical protein; hypothetical protein 1582397..1582852 Nitrosomonas sp. Is79A3 10933574 YP_004694713.1 CDS Nit79A3_1482 NC_015731.1 1582761 1582937 R hypothetical protein complement(1582761..1582937) Nitrosomonas sp. Is79A3 10933575 YP_004694714.1 CDS Nit79A3_1483 NC_015731.1 1582994 1583314 D hypothetical protein 1582994..1583314 Nitrosomonas sp. Is79A3 10933576 YP_004694715.1 CDS Nit79A3_1484 NC_015731.1 1583314 1584087 D hypothetical protein 1583314..1584087 Nitrosomonas sp. Is79A3 10933577 YP_004694716.1 CDS Nit79A3_1485 NC_015731.1 1584084 1585175 D KEGG: nit:NAL212_2626 hypothetical protein; hypothetical protein 1584084..1585175 Nitrosomonas sp. Is79A3 10933578 YP_004694717.1 CDS Nit79A3_1486 NC_015731.1 1585515 1586777 D PFAM: Integrase, catalytic core, phage; KEGG: nit:NAL212_2056 integrase; integrase 1585515..1586777 Nitrosomonas sp. Is79A3 10933579 YP_004694718.1 CDS Nit79A3_1487 NC_015731.1 1587348 1588655 D KEGG: aba:Acid345_3092 hypothetical protein; hypothetical protein 1587348..1588655 Nitrosomonas sp. Is79A3 10933580 YP_004694719.1 CDS Nit79A3_1488 NC_015731.1 1588773 1589069 R hypothetical protein complement(1588773..1589069) Nitrosomonas sp. Is79A3 10933581 YP_004694720.1 CDS Nit79A3_1489 NC_015731.1 1589038 1589346 R hypothetical protein complement(1589038..1589346) Nitrosomonas sp. Is79A3 10933582 YP_004694721.1 CDS Nit79A3_1490 NC_015731.1 1589803 1590969 D PFAM: Alpha/beta hydrolase fold-1; KEGG: Lysophospholipase L2; alpha/beta hydrolase 1589803..1590969 Nitrosomonas sp. Is79A3 10933583 YP_004694722.1 CDS Nit79A3_1491 NC_015731.1 1591128 1591688 R PFAM: Resolvase, N-terminal; Resolvase, helix-turn-helix region; KEGG: nwa:Nwat_2435 resolvase domain-containing protein; Resolvase domain-containing protein complement(1591128..1591688) Nitrosomonas sp. Is79A3 10933584 YP_004694723.1 CDS Nit79A3_1492 NC_015731.1 1592115 1594199 D KEGG: ecd:ECDH10B_1362 hypothetical protein; hypothetical protein 1592115..1594199 Nitrosomonas sp. Is79A3 10933585 YP_004694724.1 CDS Nit79A3_1494 NC_015731.1 1594810 1594923 R hypothetical protein complement(1594810..1594923) Nitrosomonas sp. Is79A3 10933587 YP_004694725.1 CDS Nit79A3_1495 NC_015731.1 1595794 1596237 D hypothetical protein 1595794..1596237 Nitrosomonas sp. Is79A3 10933588 YP_004694726.1 CDS Nit79A3_1496 NC_015731.1 1596306 1596554 D TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; KEGG: meh:M301_0053 protein of unknown function DUF1555; PEP motif anchor domain-containing protein 1596306..1596554 Nitrosomonas sp. Is79A3 10933589 YP_004694727.1 CDS Nit79A3_1497 NC_015731.1 1596847 1599459 R KEGG: nit:NAL212_2045 hypothetical protein; hypothetical protein complement(1596847..1599459) Nitrosomonas sp. Is79A3 10933590 YP_004694728.1 CDS Nit79A3_1498 NC_015731.1 1599654 1599836 R PFAM: Prophage CP4-57 regulatory; KEGG: nit:NAL212_2044 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA complement(1599654..1599836) Nitrosomonas sp. Is79A3 10933591 YP_004694729.1 CDS Nit79A3_1499 NC_015731.1 1599960 1600253 D KEGG: nit:NAL212_2043 hypothetical protein; hypothetical protein 1599960..1600253 Nitrosomonas sp. Is79A3 10933592 YP_004694730.1 CDS Nit79A3_1501 NC_015731.1 1601105 1601581 R hypothetical protein complement(1601105..1601581) Nitrosomonas sp. Is79A3 10933594 YP_004694731.1 CDS Nit79A3_1502 NC_015731.1 1601691 1601942 R hypothetical protein complement(1601691..1601942) Nitrosomonas sp. Is79A3 10933595 YP_004694732.1 CDS Nit79A3_1503 NC_015731.1 1602218 1602658 R KEGG: meh:M301_1818 transcriptional regulator, MerR family; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MarR family transcriptional regulator complement(1602218..1602658) Nitrosomonas sp. Is79A3 10933596 YP_004694733.1 CDS Nit79A3_1504 NC_015731.1 1602797 1603447 D TIGRFAM: thiopurine S-methyltransferase, Se/Te detoxification family; HAMAP: Thiopurine S-methyltransferase; KEGG: nde:NIDE2804 thiopurine S-methyltransferase; PFAM: Thiopurine S-methyltransferase; thiopurine S-methyltransferase 1602797..1603447 Nitrosomonas sp. Is79A3 10933597 YP_004694734.1 CDS Nit79A3_1505 NC_015731.1 1603454 1604257 D PFAM: Protein of unknown function DUF81; KEGG: meh:M301_1819 protein of unknown function DUF81; hypothetical protein 1603454..1604257 Nitrosomonas sp. Is79A3 10933598 YP_004694735.1 CDS Nit79A3_1506 NC_015731.1 1604493 1605845 R KEGG: nit:NAL212_1347 GTP-binding proten HflX; TIGRFAM: GTP-binding protein, HflX; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein HflX complement(1604493..1605845) Nitrosomonas sp. Is79A3 10933599 YP_004694736.1 CDS Nit79A3_1510 NC_015731.1 1610799 1610981 D hypothetical protein 1610799..1610981 Nitrosomonas sp. Is79A3 10933603 YP_004694737.1 CDS Nit79A3_1511 NC_015731.1 1611021 1612334 D PFAM: FAD dependent oxidoreductase; KEGG: vap:Vapar_2011 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1611021..1612334 Nitrosomonas sp. Is79A3 10933604 YP_004694738.1 CDS Nit79A3_1512 NC_015731.1 1612345 1613763 D KEGG: nmu:Nmul_A1700 homospermidine synthase; homospermidine synthase 1612345..1613763 Nitrosomonas sp. Is79A3 10933605 YP_004694739.1 CDS Nit79A3_1513 NC_015731.1 1613796 1613954 R hypothetical protein complement(1613796..1613954) Nitrosomonas sp. Is79A3 10933606 YP_004694740.1 CDS Nit79A3_1514 NC_015731.1 1613987 1616866 D PFAM: Glycoside hydrolase, family 38, core; Glycosyl hydrolases 38, C-terminal; KEGG: kol:Kole_0478 glycoside hydrolase 38; glycoside hydrolase 38 1613987..1616866 Nitrosomonas sp. Is79A3 10933607 YP_004694741.1 CDS Nit79A3_1516 NC_015731.1 1617925 1618134 D hypothetical protein 1617925..1618134 Nitrosomonas sp. Is79A3 10933609 YP_004694742.1 CDS Nit79A3_1517 NC_015731.1 1618140 1619348 D PFAM: Glycosyl transferase, group 1; KEGG: nhl:Nhal_0699 glycosyl transferase group 1; group 1 glycosyl transferase 1618140..1619348 Nitrosomonas sp. Is79A3 10933610 YP_004694743.1 CDS Nit79A3_1518 NC_015731.1 1619585 1620199 R KEGG: mmb:Mmol_1803 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(1619585..1620199) Nitrosomonas sp. Is79A3 10933611 YP_004694744.1 CDS Nit79A3_1519 NC_015731.1 1620261 1620794 R KEGG: nit:NAL212_1338 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(1620261..1620794) Nitrosomonas sp. Is79A3 10933612 YP_004694745.1 CDS Nit79A3_1520 NC_015731.1 1620902 1621168 R PFAM: Type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(1620902..1621168) Nitrosomonas sp. Is79A3 10933613 YP_004694746.1 CDS Nit79A3_1521 NC_015731.1 1621452 1622216 R KEGG: nit:NAL212_0717 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; LuxR family transcriptional regulator complement(1621452..1622216) Nitrosomonas sp. Is79A3 10933614 YP_004694747.1 CDS Nit79A3_1523 NC_015731.1 1623126 1624205 R PFAM: Permease YjgP/YjgQ, predicted; KEGG: nit:NAL212_2669 permease YjgP/YjgQ family protein; permease YjgP/YjgQ family protein complement(1623126..1624205) Nitrosomonas sp. Is79A3 10933616 YP_004694748.1 CDS Nit79A3_1524 NC_015731.1 1624274 1625113 R KEGG: nit:NAL212_2668 hypothetical protein; hypothetical protein complement(1624274..1625113) Nitrosomonas sp. Is79A3 10933617 YP_004694749.1 CDS Nit79A3_1525 NC_015731.1 1625410 1626615 D PFAM: Glycosyl transferase, group 1; KEGG: tra:Trad_0736 glycosyl transferase group 1 protein; group 1 glycosyl transferase 1625410..1626615 Nitrosomonas sp. Is79A3 10933618 YP_004694750.1 CDS Nit79A3_1526 NC_015731.1 1626617 1627813 D PFAM: Glycosyl transferase, group 1; KEGG: tra:Trad_0736 glycosyl transferase group 1 protein; group 1 glycosyl transferase 1626617..1627813 Nitrosomonas sp. Is79A3 10933619 YP_004694751.1 CDS Nit79A3_1527 NC_015731.1 1627765 1629480 R KEGG: avn:Avin_44230 ABC transporter protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter complement(1627765..1629480) Nitrosomonas sp. Is79A3 10933620 YP_004694752.1 CDS Nit79A3_1528 NC_015731.1 1629898 1630905 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: apb:SAR116_1941 nucleotide sugar epimerase; NAD-dependent epimerase/dehydratase 1629898..1630905 Nitrosomonas sp. Is79A3 10933621 YP_004694753.1 CDS Nit79A3_1529 NC_015731.1 1630902 1632242 D KEGG: avn:Avin_27790 UDP-glucose 6-dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; nucleotide sugar dehydrogenase 1630902..1632242 Nitrosomonas sp. Is79A3 10933622 YP_004694754.1 CDS Nit79A3_1530 NC_015731.1 1632129 1632551 R KEGG: psa:PST_1428 lipoprotein; hypothetical protein complement(1632129..1632551) Nitrosomonas sp. Is79A3 10933623 YP_004694755.1 CDS Nit79A3_1531 NC_015731.1 1632784 1632897 D PFAM: Heat shock protein 70; KEGG: rfr:Rfer_0832 heat shock protein 70; molecular chaperone DnaK 1632784..1632897 Nitrosomonas sp. Is79A3 10933624 YP_004694756.1 CDS Nit79A3_1534 NC_015731.1 1636299 1636637 D KEGG: nit:NAL212_1538 hypothetical protein; hypothetical protein 1636299..1636637 Nitrosomonas sp. Is79A3 10933627 YP_004694757.1 CDS Nit79A3_1535 NC_015731.1 1636696 1636896 D hypothetical protein 1636696..1636896 Nitrosomonas sp. Is79A3 10933628 YP_004694758.1 CDS Nit79A3_1536 NC_015731.1 1636950 1637399 D PFAM: Heat shock protein Hsp20; KEGG: nmu:Nmul_A1167 heat shock protein HSP20; heat shock protein Hsp20 1636950..1637399 Nitrosomonas sp. Is79A3 10933629 YP_004694759.1 CDS Nit79A3_1537 NC_015731.1 1637560 1637850 D KEGG: app:CAP2UW1_2275 chaperonin Cpn10; HAMAP: Chaperonin Cpn10, subgroup; PFAM: Chaperonin Cpn10; molecular chaperone GroES 1637560..1637850 Nitrosomonas sp. Is79A3 10933630 YP_004694760.1 CDS Nit79A3_1538 NC_015731.1 1637884 1639506 D TIGRFAM: Chaperonin Cpn60; HAMAP: 60 kDa chaperonin; KEGG: azo:azo0974 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; molecular chaperone GroEL 1637884..1639506 Nitrosomonas sp. Is79A3 10933631 YP_004694761.1 CDS Nit79A3_1539 NC_015731.1 1639657 1640013 D KEGG: tbd:Tbd_1444 hypothetical protein; hypothetical protein 1639657..1640013 Nitrosomonas sp. Is79A3 10933632 YP_004694762.1 CDS Nit79A3_1540 NC_015731.1 1640081 1640524 D KEGG: nit:NAL212_2279 hypothetical protein; hypothetical protein 1640081..1640524 Nitrosomonas sp. Is79A3 10933633 YP_004694763.1 CDS Nit79A3_1541 NC_015731.1 1640541 1641086 D KEGG: nit:NAL212_2278 hypothetical protein; hypothetical protein 1640541..1641086 Nitrosomonas sp. Is79A3 10933634 YP_004694764.1 CDS Nit79A3_1543 NC_015731.1 1641476 1641799 R PFAM: Dopa 4,5-dioxygenase; KEGG: vha:VIBHAR_05556 4,5-dioxygenase; Dopa 45-dioxygenase complement(1641476..1641799) Nitrosomonas sp. Is79A3 10933636 YP_004694765.1 CDS Nit79A3_1544 NC_015731.1 1641822 1642205 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nit:NAL212_2274 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(1641822..1642205) Nitrosomonas sp. Is79A3 10933637 YP_004694766.1 CDS Nit79A3_1545 NC_015731.1 1642396 1643676 R PFAM: FAD dependent oxidoreductase; KEGG: neu:NE2199 flavin-containing monooxygenase (FMO); FAD dependent oxidoreductase complement(1642396..1643676) Nitrosomonas sp. Is79A3 10933638 YP_004694767.1 CDS Nit79A3_1546 NC_015731.1 1643969 1645234 R KEGG: nit:NAL212_1825 hypothetical protein; hypothetical protein complement(1643969..1645234) Nitrosomonas sp. Is79A3 10933639 YP_004694768.1 CDS Nit79A3_1547 NC_015731.1 1645326 1645691 R hypothetical protein complement(1645326..1645691) Nitrosomonas sp. Is79A3 10933640 YP_004694769.1 CDS Nit79A3_1548 NC_015731.1 1645739 1646065 R KEGG: nit:NAL212_2068 lipoprotein; lipoprotein complement(1645739..1646065) Nitrosomonas sp. Is79A3 10933641 YP_004694770.1 CDS Nit79A3_1549 NC_015731.1 1646454 1647020 R PFAM: NADPH-dependent FMN reductase; KEGG: nmu:Nmul_A1470 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(1646454..1647020) Nitrosomonas sp. Is79A3 10933642 YP_004694771.1 CDS Nit79A3_1552 NC_015731.1 1648327 1649529 R PFAM: Acyltransferase 3; KEGG: sli:Slin_3508 acyltransferase 3; acyltransferase complement(1648327..1649529) Nitrosomonas sp. Is79A3 10933645 YP_004694772.1 CDS Nit79A3_1553 NC_015731.1 1650407 1652365 D KEGG: cvi:CV_1113 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; DNA topoisomerase, type IIA, subunit B, C-terminal; SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; DNA topoisomerase type IIA subunit B region 2 domain-containing protein 1650407..1652365 Nitrosomonas sp. Is79A3 10933646 YP_004694773.1 CDS Nit79A3_1554 NC_015731.1 1652372 1654756 D TIGRFAM: DNA topoisomerase IV, subunit A, Gram-negative; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; KEGG: tmz:Tmz1t_2931 DNA topoisomerase IV subunit A; SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA topoisomerase IV subunit A 1652372..1654756 Nitrosomonas sp. Is79A3 10933647 YP_004694774.1 CDS Nit79A3_1555 NC_015731.1 1654959 1655948 R KEGG: nit:NAL212_2369 hopanoid-associated sugar epimerase; TIGRFAM: Hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; hopanoid-associated sugar epimerase complement(1654959..1655948) Nitrosomonas sp. Is79A3 10933648 YP_004694775.1 CDS Nit79A3_1556 NC_015731.1 1656025 1657095 R PFAM: Squalene/phytoene synthase; KEGG: nit:NAL212_2368 squalene/phytoene synthase; Squalene/phytoene synthase complement(1656025..1657095) Nitrosomonas sp. Is79A3 10933649 YP_004694776.1 CDS Nit79A3_1557 NC_015731.1 1657167 1658420 R KEGG: nit:NAL212_2367 diaminopimelate decarboxylase; TIGRFAM: Diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase complement(1657167..1658420) Nitrosomonas sp. Is79A3 10933650 YP_004694777.1 CDS Nit79A3_1558 NC_015731.1 1658417 1658545 R KEGG: nit:NAL212_2366 hypothetical protein; hypothetical protein complement(1658417..1658545) Nitrosomonas sp. Is79A3 10933651 YP_004694778.1 CDS Nit79A3_1559 NC_015731.1 1658786 1659415 R PFAM: Protein of unknown function DUF330; KEGG: nit:NAL212_2365 hypothetical protein; hypothetical protein complement(1658786..1659415) Nitrosomonas sp. Is79A3 10933652 YP_004694779.1 CDS Nit79A3_1560 NC_015731.1 1659412 1660311 R PFAM: Mammalian cell entry related; KEGG: nit:NAL212_2364 mammalian cell entry related domain-containing protein; Mammalian cell entry related domain-containing protein complement(1659412..1660311) Nitrosomonas sp. Is79A3 10933653 YP_004694780.1 CDS Nit79A3_1561 NC_015731.1 1660284 1661114 R KEGG: nit:NAL212_2363 sulfate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter complement(1660284..1661114) Nitrosomonas sp. Is79A3 10933654 YP_004694781.1 CDS Nit79A3_1562 NC_015731.1 1661098 1662261 R KEGG: nit:NAL212_2362 hypothetical protein; TIGRFAM: Protein of unknown function DUF140; PFAM: Protein of unknown function DUF140; hypothetical protein complement(1661098..1662261) Nitrosomonas sp. Is79A3 10933655 YP_004694782.1 CDS Nit79A3_1563 NC_015731.1 1662429 1663892 R KEGG: nit:NAL212_2361 cell wall hydrolase/autolysin; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; cell wall hydrolase/autolysin complement(1662429..1663892) Nitrosomonas sp. Is79A3 10933656 YP_004694783.1 CDS Nit79A3_1564 NC_015731.1 1663856 1664320 R KEGG: nit:NAL212_2360 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; hypothetical protein complement(1663856..1664320) Nitrosomonas sp. Is79A3 10933657 YP_004694784.1 CDS Nit79A3_1565 NC_015731.1 1664357 1665469 D KEGG: nit:NAL212_2359 iron-sulfur cluster binding protein; TIGRFAM: 4Fe-4S cluster binding; PFAM: Domain of unknown function DUF1730; iron-sulfur cluster binding protein 1664357..1665469 Nitrosomonas sp. Is79A3 10933658 YP_004694785.1 CDS Nit79A3_1566 NC_015731.1 1665466 1666677 D TIGRFAM: Phosphoribosylglycinamide formyltransferase 2; HAMAP: Phosphoribosylglycinamide formyltransferase 2; KEGG: nit:NAL212_2358 phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; Phosphoribosylglycinamide formyltransferase 2 1665466..1666677 Nitrosomonas sp. Is79A3 10933659 YP_004694786.1 CDS Nit79A3_1567 NC_015731.1 1666707 1667615 D PFAM: Aldose 1-epimerase; KEGG: nit:NAL212_2357 aldose 1-epimerase; aldose 1-epimerase 1666707..1667615 Nitrosomonas sp. Is79A3 10933660 YP_004694787.1 CDS Nit79A3_1568 NC_015731.1 1667705 1668730 D hypothetical protein 1667705..1668730 Nitrosomonas sp. Is79A3 10933661 YP_004694788.1 CDS Nit79A3_1569 NC_015731.1 1668965 1670341 D KEGG: nit:NAL212_0468 anion transporter; TIGRFAM: Sodium/sulphate symporter; PFAM: Sodium/sulphate symporter; anion transporter 1668965..1670341 Nitrosomonas sp. Is79A3 10933662 YP_004694789.1 CDS Nit79A3_1570 NC_015731.1 1670310 1670885 R KEGG: nit:NAL212_2353 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase complement(1670310..1670885) Nitrosomonas sp. Is79A3 10933663 YP_004694790.1 CDS Nit79A3_1571 NC_015731.1 1670958 1671584 D TIGRFAM: Thymidylate kinase; HAMAP: Thymidylate kinase; KEGG: nit:NAL212_2352 thymidylate kinase; PFAM: Thymidylate kinase-like; thymidylate kinase 1670958..1671584 Nitrosomonas sp. Is79A3 10933664 YP_004694791.1 CDS Nit79A3_1572 NC_015731.1 1671577 1672617 D TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: nit:NAL212_2351 DNA polymerase III, delta prime subunit; DNA polymerase III subunit delta' 1671577..1672617 Nitrosomonas sp. Is79A3 10933665 YP_004694792.1 CDS Nit79A3_1573 NC_015731.1 1672618 1673139 R PFAM: Protein of unknown function DUF336; KEGG: nit:NAL212_2350 hypothetical protein; hypothetical protein complement(1672618..1673139) Nitrosomonas sp. Is79A3 10933666 YP_004694793.1 CDS Nit79A3_1574 NC_015731.1 1673223 1673936 D PFAM: Dienelactone hydrolase; KEGG: nit:NAL212_2349 dienelactone hydrolase; dienelactone hydrolase 1673223..1673936 Nitrosomonas sp. Is79A3 10933667 YP_004694794.1 CDS Nit79A3_1575 NC_015731.1 1674036 1675007 R PFAM: Sulphatase-modifying factor; KEGG: app:CAP2UW1_2119 hypothetical protein; sulfatase-modifying factor protein complement(1674036..1675007) Nitrosomonas sp. Is79A3 10933668 YP_004694795.1 CDS Nit79A3_1576 NC_015731.1 1674970 1675503 R KEGG: tkm:TK90_1685 transposase; transposase complement(1674970..1675503) Nitrosomonas sp. Is79A3 10933669 YP_004694796.1 CDS Nit79A3_1577 NC_015731.1 1675562 1677199 R PFAM: Transposase, IS4-like; KEGG: afe:Lferr_1749 hypothetical protein; transposase IS4 family protein complement(1675562..1677199) Nitrosomonas sp. Is79A3 10933670 YP_004694797.1 CDS Nit79A3_1578 NC_015731.1 1677603 1680353 R PFAM: Sulphatase-modifying factor; KEGG: app:CAP2UW1_3091 hypothetical protein; sulfatase-modifying factor protein complement(1677603..1680353) Nitrosomonas sp. Is79A3 10933671 YP_004694798.1 CDS Nit79A3_1580 NC_015731.1 1681383 1682810 R SMART: Toll-Interleukin receptor; TIR protein complement(1681383..1682810) Nitrosomonas sp. Is79A3 10933673 YP_004694799.1 CDS Nit79A3_1581 NC_015731.1 1682876 1683211 R KEGG: nde:NIDE1720 antidote of proteic killer gene system; TIGRFAM: Addiction module antidote protein, HigA; PFAM: Helix-turn-helix type 3; XRE family transcriptional regulator complement(1682876..1683211) Nitrosomonas sp. Is79A3 10933674 YP_004694800.1 CDS Nit79A3_1582 NC_015731.1 1683224 1683502 R PFAM: Plasmid maintenance system killer; KEGG: nde:NIDE1719 toxin of proteic killer gene system; plasmid maintenance system killer complement(1683224..1683502) Nitrosomonas sp. Is79A3 10933675 YP_004694801.1 CDS Nit79A3_1583 NC_015731.1 1683587 1684771 R PFAM: Alcohol dehydrogenase, iron-type; KEGG: nit:NAL212_2345 alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(1683587..1684771) Nitrosomonas sp. Is79A3 10933676 YP_004694802.1 CDS Nit79A3_1584 NC_015731.1 1684771 1685073 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: nit:NAL212_2344 antibiotic biosynthesis monooxygenase; Antibiotic biosynthesis monooxygenase complement(1684771..1685073) Nitrosomonas sp. Is79A3 10933677 YP_004694803.1 CDS Nit79A3_1586 NC_015731.1 1685517 1686632 R PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein complement(1685517..1686632) Nitrosomonas sp. Is79A3 10933679 YP_004694804.1 CDS Nit79A3_1587 NC_015731.1 1686839 1687411 R KEGG: nmu:Nmul_A1193 transport-associated protein; PFAM: Transport-associated; SMART: Transport-associated and nodulation region, bacteria; transport-associated protein complement(1686839..1687411) Nitrosomonas sp. Is79A3 10933680 YP_004694805.1 CDS Nit79A3_1588 NC_015731.1 1687690 1687863 R PFAM: CsbD-like; KEGG: nmu:Nmul_A1602 CsbD-like; CsbD family protein complement(1687690..1687863) Nitrosomonas sp. Is79A3 10933681 YP_004694806.1 CDS Nit79A3_1589 NC_015731.1 1688087 1689337 R PFAM: Major facilitator superfamily MFS-1; KEGG: cyn:Cyan7425_4223 folate/biopterin transporter; major facilitator superfamily protein complement(1688087..1689337) Nitrosomonas sp. Is79A3 10933682 YP_004694807.1 CDS Nit79A3_1590 NC_015731.1 1690442 1690867 D TIGRFAM: RNA polymerase-binding, DksA; KEGG: nit:NAL212_1359 transcriptional regulator, TraR/DksA family; TraR/DksA family transcriptional regulator 1690442..1690867 Nitrosomonas sp. Is79A3 10933683 YP_004694808.1 CDS Nit79A3_1591 NC_015731.1 1690927 1693047 R TIGRFAM: Polyribonucleotide nucleotidyltransferase; HAMAP: Polyribonucleotide nucleotidyltransferase; KEGG: nit:NAL212_1360 polyribonucleotide nucleotidyltransferase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA binding domain; polyribonucleotide nucleotidyltransferase complement(1690927..1693047) Nitrosomonas sp. Is79A3 10933684 YP_004694809.1 CDS Nit79A3_1592 NC_015731.1 1693184 1693453 R KEGG: nit:NAL212_1361 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15; 30S ribosomal protein S15 complement(1693184..1693453) Nitrosomonas sp. Is79A3 10933685 YP_004694810.1 CDS Nit79A3_1593 NC_015731.1 1693787 1694806 R TIGRFAM: Phosphate binding protein; KEGG: nit:NAL212_2305 phosphate binding protein; phosphate binding protein complement(1693787..1694806) Nitrosomonas sp. Is79A3 10933686 YP_004694811.1 CDS Nit79A3_1594 NC_015731.1 1695033 1696790 R PFAM: Phosphate-selective porin O/P; KEGG: nit:NAL212_2304 phosphate-selective porin O and P; phosphate-selective porin O and P complement(1695033..1696790) Nitrosomonas sp. Is79A3 10933687 YP_004694812.1 CDS Nit79A3_1595 NC_015731.1 1697140 1697949 D KEGG: nit:NAL212_2606 methane monooxygenase/ammonia monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; methane monooxygenase/ammonia monooxygenase subunit C 1697140..1697949 Nitrosomonas sp. Is79A3 10933688 YP_004694813.1 CDS Nit79A3_1596 NC_015731.1 1698105 1698542 D KEGG: nit:NAL212_2302 hypothetical protein; hypothetical protein 1698105..1698542 Nitrosomonas sp. Is79A3 10933689 YP_004694814.1 CDS Nit79A3_1597 NC_015731.1 1699072 1699599 D PFAM: GCN5-related N-acetyltransferase; KEGG: nit:NAL212_2298 GCN5-like N-acetyltransferase; GCN5-like N-acetyltransferase 1699072..1699599 Nitrosomonas sp. Is79A3 10933690 YP_004694815.1 CDS Nit79A3_1598 NC_015731.1 1699603 1700430 D TIGRFAM: Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; KEGG: nit:NAL212_2297 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; Diaminopimelate epimerase 1699603..1700430 Nitrosomonas sp. Is79A3 10933691 YP_004694816.1 CDS Nit79A3_1599 NC_015731.1 1700448 1701149 D PFAM: Protein of unknown function DUF484; KEGG: nit:NAL212_2296 hypothetical protein; hypothetical protein 1700448..1701149 Nitrosomonas sp. Is79A3 10933692 YP_004694817.1 CDS Nit79A3_1600 NC_015731.1 1701139 1702032 D KEGG: nit:NAL212_2295 tyrosine recombinase XerC; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; Tyrosine recombinase xerC 1701139..1702032 Nitrosomonas sp. Is79A3 10933693 YP_004694818.1 CDS Nit79A3_1601 NC_015731.1 1702112 1702633 D TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; HAMAP: ATP-dependent protease hslV; KEGG: nit:NAL212_2294 ATP-dependent protease HslVU, peptidase subunit; PFAM: Proteasome, subunit alpha/beta; ATP-dependent protease hslV 1702112..1702633 Nitrosomonas sp. Is79A3 10933694 YP_004694819.1 CDS Nit79A3_1602 NC_015731.1 1702755 1704086 D SMART: ATPase, AAA+ type, core; TIGRFAM: Heat shock protein HslU; KEGG: nit:NAL212_2293 ATP-dependent hsl protease ATP-binding subunit HslU; HAMAP: ATP-dependent hsl protease ATP-binding subunit hslU; PFAM: ATPase associated with various cellular activities, AAA-2; ATP-dependent hsl protease ATP-binding subunit hslU 1702755..1704086 Nitrosomonas sp. Is79A3 10933695 YP_004694820.1 CDS Nit79A3_1603 NC_015731.1 1704226 1704912 R TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; Laminin B type IV; KEGG: hbo:Hbor_38190 phosphodiesterase/alkaline phosphatase D; SMART: Laminin B; PEP motif anchor domain-containing protein complement(1704226..1704912) Nitrosomonas sp. Is79A3 10933696 YP_004694821.1 CDS Nit79A3_1604 NC_015731.1 1705182 1705505 D KEGG: nit:NAL212_2040 regulatory protein, FmdB family; TIGRFAM: Regulatory protein, FmdB, PFAM: Regulatory protein, FmdB; FmdB family regulatory protein 1705182..1705505 Nitrosomonas sp. Is79A3 10933697 YP_004694822.1 CDS Nit79A3_1605 NC_015731.1 1705645 1707432 D KEGG: nit:NAL212_2039 aspartyl-tRNA synthetase; TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain; aspartyl-tRNA synthetase 1705645..1707432 Nitrosomonas sp. Is79A3 10933698 YP_004694823.1 CDS Nit79A3_1606 NC_015731.1 1707450 1707893 D PFAM: NUDIX hydrolase domain; KEGG: nit:NAL212_2038 NUDIX hydrolase; NUDIX hydrolase 1707450..1707893 Nitrosomonas sp. Is79A3 10933699 YP_004694824.1 CDS Nit79A3_1607 NC_015731.1 1707903 1709171 R PFAM: Sulphate transporter; KEGG: nit:NAL212_0858 sulfate transporter; sulfate transporter complement(1707903..1709171) Nitrosomonas sp. Is79A3 10933700 YP_004694825.1 CDS Nit79A3_1608 NC_015731.1 1709355 1709588 R hypothetical protein complement(1709355..1709588) Nitrosomonas sp. Is79A3 10933701 YP_004694826.1 CDS Nit79A3_1609 NC_015731.1 1709888 1710937 R KEGG: din:Selin_1106 hypothetical protein; hypothetical protein complement(1709888..1710937) Nitrosomonas sp. Is79A3 10933702 YP_004694827.1 CDS Nit79A3_1610 NC_015731.1 1710980 1712485 R KEGG: nhl:Nhal_2893 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase, chain M complement(1710980..1712485) Nitrosomonas sp. Is79A3 10933703 YP_004694828.1 CDS Nit79A3_1611 NC_015731.1 1712487 1714079 R KEGG: nhl:Nhal_2894 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase, chain M complement(1712487..1714079) Nitrosomonas sp. Is79A3 10933704 YP_004694829.1 CDS Nit79A3_1612 NC_015731.1 1714087 1715655 R PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; KEGG: nhl:Nhal_2895 NADH/ubiquinone/plastoquinone (complex I); NADH/Ubiquinone/plastoquinone (complex I) complement(1714087..1715655) Nitrosomonas sp. Is79A3 10933705 YP_004694830.1 CDS Nit79A3_1613 NC_015731.1 1715657 1718932 R KEGG: mca:MCA0512 hypothetical protein; HAMAP: UPF0753 protein; PFAM: Protein of unknown function DUF2309; hypothetical protein complement(1715657..1718932) Nitrosomonas sp. Is79A3 10933706 YP_004694831.1 CDS Nit79A3_1614 NC_015731.1 1718943 1720415 R KEGG: nhl:Nhal_2897 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase, chain M complement(1718943..1720415) Nitrosomonas sp. Is79A3 10933707 YP_004694832.1 CDS Nit79A3_1615 NC_015731.1 1721027 1722061 D KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase 1721027..1722061 Nitrosomonas sp. Is79A3 10933708 YP_004694833.1 CDS Nit79A3_1616 NC_015731.1 1722236 1722535 R hypothetical protein complement(1722236..1722535) Nitrosomonas sp. Is79A3 10933709 YP_004694834.1 CDS Nit79A3_1617 NC_015731.1 1722538 1723500 D PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 1722538..1723500 Nitrosomonas sp. Is79A3 10933710 YP_004694835.1 CDS Nit79A3_1618 NC_015731.1 1723751 1725061 D PFAM: SEFIR; KEGG: cyj:Cyan7822_0499 purine or other phosphorylase 1; SEFIR domain-containing protein 1723751..1725061 Nitrosomonas sp. Is79A3 10933711 YP_004694836.1 CDS Nit79A3_1619 NC_015731.1 1725068 1726228 D SMART: ATPase, AAA+ type, core; KEGG: ter:Tery_2060 ATPase-like protein; ATPase AAA 1725068..1726228 Nitrosomonas sp. Is79A3 10933712 YP_004694837.1 CDS Nit79A3_1620 NC_015731.1 1726238 1729369 D PFAM: Sulphatase-modifying factor; KEGG: gsu:GSU0897 hypothetical protein; sulfatase-modifying factor protein 1726238..1729369 Nitrosomonas sp. Is79A3 10933713 YP_004694838.1 CDS Nit79A3_1621 NC_015731.1 1729703 1730791 D PFAM: Sulphatase-modifying factor; KEGG: app:CAP2UW1_2883 hypothetical protein; sulfatase-modifying factor protein 1729703..1730791 Nitrosomonas sp. Is79A3 10933714 YP_004694839.1 CDS Nit79A3_1622 NC_015731.1 1731106 1731633 R KEGG: nit:NAL212_1780 hypothetical protein; hypothetical protein complement(1731106..1731633) Nitrosomonas sp. Is79A3 10933715 YP_004694840.1 CDS Nit79A3_1623 NC_015731.1 1731896 1733671 D PFAM: Regulator of K+ conductance, C-terminal; Divalent ion symporter; KEGG: nit:NAL212_1779 citrate transporter; TrkA-C domain-containing protein 1731896..1733671 Nitrosomonas sp. Is79A3 10933716 YP_004694841.1 CDS Nit79A3_1625 NC_015731.1 1736171 1737178 D PFAM: Ribonuclease T2; KEGG: nit:NAL212_0941 ribonuclease T2; ribonuclease T2 1736171..1737178 Nitrosomonas sp. Is79A3 10933718 YP_004694842.1 CDS Nit79A3_1626 NC_015731.1 1737236 1738501 R KEGG: pfo:Pfl01_3363 Epralysin. Metallo peptidase. MEROPS family M10B; PFAM: Peptidase M10A/M12B, matrixin/adamalysin; Haemolysin-type calcium-binding region; SMART: Peptidase, metallopeptidases; peptidase M10A and M12B matrixin and adamalysin complement(1737236..1738501) Nitrosomonas sp. Is79A3 10933719 YP_004694843.1 CDS Nit79A3_1627 NC_015731.1 1738999 1739829 D KEGG: neu:NE2218 hypothetical protein; hypothetical protein 1738999..1739829 Nitrosomonas sp. Is79A3 10933720 YP_004694844.1 CDS Nit79A3_1628 NC_015731.1 1740225 1740818 D KEGG: nit:NAL212_0896 cytochrome P460; cytochrome P460 1740225..1740818 Nitrosomonas sp. Is79A3 10933721 YP_004694845.1 CDS Nit79A3_1629 NC_015731.1 1741020 1741793 R KEGG: nit:NAL212_2801 hydroxyacylglutathione hydrolase; TIGRFAM: Hydroxyacylglutathione hydrolase; HAMAP: Hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase complement(1741020..1741793) Nitrosomonas sp. Is79A3 10933722 YP_004694846.1 CDS Nit79A3_1630 NC_015731.1 1741879 1742652 D PFAM: Methyltransferase type 11; KEGG: nit:NAL212_2800 methyltransferase type 11; type 11 methyltransferase 1741879..1742652 Nitrosomonas sp. Is79A3 10933723 YP_004694847.1 CDS Nit79A3_1631 NC_015731.1 1742663 1743127 D KEGG: nit:NAL212_2799 ribonuclease H; HAMAP: Ribonuclease H; PFAM: Ribonuclease H; Ribonuclease H 1742663..1743127 Nitrosomonas sp. Is79A3 10933724 YP_004694848.1 CDS Nit79A3_1632 NC_015731.1 1743140 1743883 D TIGRFAM: DNA polymerase 3, epsilon subunit; DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; KEGG: nit:NAL212_2798 DNA polymerase III, epsilon subunit; SMART: Exonuclease; DNA polymerase III subunit epsilon 1743140..1743883 Nitrosomonas sp. Is79A3 10933725 YP_004694849.1 CDS Nit79A3_1633 NC_015731.1 1744018 1744776 R PFAM: Chemotaxis phosphatase, CheZ; KEGG: nit:NAL212_2371 chemotaxis phosphatase, CheZ; chemotaxis protein CheZ complement(1744018..1744776) Nitrosomonas sp. Is79A3 10933726 YP_004694850.1 CDS Nit79A3_1634 NC_015731.1 1744818 1745219 R KEGG: nit:NAL212_2370 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein complement(1744818..1745219) Nitrosomonas sp. Is79A3 10933727 YP_004694851.1 CDS Nit79A3_1636 NC_015731.1 1745792 1746820 R TIGRFAM: Tetraacyldisaccharide 4'-kinase; HAMAP: Tetraacyldisaccharide 4'-kinase; KEGG: nit:NAL212_1514 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4'-kinase complement(1745792..1746820) Nitrosomonas sp. Is79A3 10933729 YP_004694852.1 CDS Nit79A3_1637 NC_015731.1 1747000 1747890 D KEGG: nit:NAL212_1515 esterase/lipase/thioesterase; esterase 1747000..1747890 Nitrosomonas sp. Is79A3 10933730 YP_004694853.1 CDS Nit79A3_1638 NC_015731.1 1748300 1749475 D KEGG: neu:NE2353 molybdopterin/thiamine biosynthesis family protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; Rhodanese-like; SMART: Rhodanese-like; UBA/THIF-type NAD/FAD binding protein 1748300..1749475 Nitrosomonas sp. Is79A3 10933731 YP_004694854.1 CDS Nit79A3_1639 NC_015731.1 1749623 1750066 D KEGG: neu:NE2352 Mov34 family protein; PFAM: Mov34/MPN/PAD-1; SMART: Mov34/MPN/PAD-1; Mov34/MPN/PAD-1 family protein 1749623..1750066 Nitrosomonas sp. Is79A3 10933732 YP_004694855.1 CDS Nit79A3_1640 NC_015731.1 1750164 1750481 D PFAM: ThiamineS; KEGG: neu:NE2351 hypothetical protein; sulfur transfer protein ThiS 1750164..1750481 Nitrosomonas sp. Is79A3 10933733 YP_004694856.1 CDS Nit79A3_1641 NC_015731.1 1750530 1752416 D PFAM: CoA-transferase III; KEGG: neu:NE2350 L-carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F 1750530..1752416 Nitrosomonas sp. Is79A3 10933734 YP_004694857.1 CDS Nit79A3_1642 NC_015731.1 1752413 1754095 D PFAM: AMP-dependent synthetase/ligase; KEGG: neu:NE2349 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 1752413..1754095 Nitrosomonas sp. Is79A3 10933735 YP_004694858.1 CDS Nit79A3_1643 NC_015731.1 1754095 1755297 D PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal; KEGG: neu:NE2348 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 1754095..1755297 Nitrosomonas sp. Is79A3 10933736 YP_004694859.1 CDS Nit79A3_1644 NC_015731.1 1755355 1756557 D PFAM: Major facilitator superfamily MFS-1; KEGG: neu:NE2347 general substrate transporters; major facilitator superfamily protein 1755355..1756557 Nitrosomonas sp. Is79A3 10933737 YP_004694860.1 CDS Nit79A3_1645 NC_015731.1 1756589 1757374 R PFAM: Alpha/beta hydrolase fold-1; KEGG: neu:NE2346 hydrolase; alpha/beta hydrolase complement(1756589..1757374) Nitrosomonas sp. Is79A3 10933738 YP_004694861.1 CDS Nit79A3_1646 NC_015731.1 1757563 1758678 R PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein complement(1757563..1758678) Nitrosomonas sp. Is79A3 10933739 YP_004694862.1 CDS Nit79A3_1647 NC_015731.1 1758808 1760256 D KEGG: neu:NE2345 hypothetical protein; hypothetical protein 1758808..1760256 Nitrosomonas sp. Is79A3 10933740 YP_004694863.1 CDS Nit79A3_1648 NC_015731.1 1760271 1761404 D PFAM: Glycosyl hydrolase, family 88; KEGG: nmu:Nmul_A0964 unsaturated glucuronyl hydrolase; glycosyl hydrolase 88 1760271..1761404 Nitrosomonas sp. Is79A3 10933741 YP_004694864.1 CDS Nit79A3_1649 NC_015731.1 1761438 1762712 D PFAM: Amidohydrolase 1; KEGG: nmu:Nmul_A0963 amidohydrolase; amidohydrolase 1761438..1762712 Nitrosomonas sp. Is79A3 10933742 YP_004694865.1 CDS Nit79A3_1650 NC_015731.1 1763345 1764175 D KEGG: nit:NAL212_1278 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1763345..1764175 Nitrosomonas sp. Is79A3 10933743 YP_004694866.1 CDS Nit79A3_1651 NC_015731.1 1764392 1766596 D PFAM: Di-haem cytochrome c peroxidase; KEGG: nit:NAL212_1277 di-heme cytochrome c peroxidase; Di-heme cytochrome c peroxidase 1764392..1766596 Nitrosomonas sp. Is79A3 10933744 YP_004694867.1 CDS Nit79A3_1652 NC_015731.1 1766890 1767705 D KEGG: nmu:Nmul_A1190 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1766890..1767705 Nitrosomonas sp. Is79A3 10933745 YP_004694868.1 CDS Nit79A3_1653 NC_015731.1 1768122 1769651 D PFAM: Amidohydrolase 1; KEGG: nit:NAL212_1813 amidohydrolase; amidohydrolase 1768122..1769651 Nitrosomonas sp. Is79A3 10933746 YP_004694869.1 CDS Nit79A3_1654 NC_015731.1 1769847 1771553 R KEGG: nit:NAL212_1516 hypothetical protein; hypothetical protein complement(1769847..1771553) Nitrosomonas sp. Is79A3 10933747 YP_004694870.1 CDS Nit79A3_1655 NC_015731.1 1771921 1772781 R PFAM: Radical SAM; KEGG: nit:NAL212_1517 radical SAM domain-containing protein; Radical SAM domain-containing protein complement(1771921..1772781) Nitrosomonas sp. Is79A3 10933748 YP_004694871.1 CDS Nit79A3_1656 NC_015731.1 1772827 1773276 D KEGG: nit:NAL212_1518 queuosine biosynthesis protein QueD; TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; queuosine biosynthesis protein QueD 1772827..1773276 Nitrosomonas sp. Is79A3 10933749 YP_004694872.1 CDS Nit79A3_1657 NC_015731.1 1773299 1774084 D KEGG: nit:NAL212_1519 hydrolase, TatD family; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related; TatD family hydrolase 1773299..1774084 Nitrosomonas sp. Is79A3 10933750 YP_004694873.1 CDS Nit79A3_1658 NC_015731.1 1774065 1774721 D PFAM: Ankyrin repeat; KEGG: nit:NAL212_1520 ankyrin; Ankyrin 1774065..1774721 Nitrosomonas sp. Is79A3 10933751 YP_004694874.1 CDS Nit79A3_1659 NC_015731.1 1774756 1775496 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nit:NAL212_1521 3-oxoacyl-(acyl-carrier-protein) reductase; short-chain dehydrogenase/reductase SDR 1774756..1775496 Nitrosomonas sp. Is79A3 10933752 YP_004694875.1 CDS Nit79A3_1660 NC_015731.1 1775518 1776633 D KEGG: nit:NAL212_1522 alanine dehydrogenase; TIGRFAM: Alanine dehydrogenase/pyridine nucleotide transhydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; alanine dehydrogenase 1775518..1776633 Nitrosomonas sp. Is79A3 10933753 YP_004694876.1 CDS Nit79A3_1661 NC_015731.1 1776691 1777575 R PFAM: Metal-dependent hydrolase HDOD; KEGG: nit:NAL212_1337 signal transduction protein; signal transduction protein complement(1776691..1777575) Nitrosomonas sp. Is79A3 10933754 YP_004694877.1 CDS Nit79A3_1663 NC_015731.1 1777800 1778114 R TIGRFAM: Addiction module antidote protein, HigA; PFAM: Helix-turn-helix type 3; KEGG: tgr:Tgr7_1105 XRE family plasmid maintenance system antidote protein; SMART: Helix-turn-helix type 3; XRE family transcriptional regulator complement(1777800..1778114) Nitrosomonas sp. Is79A3 10933756 YP_004694878.1 CDS Nit79A3_1664 NC_015731.1 1778130 1778423 R PFAM: Plasmid maintenance system killer; KEGG: cyj:Cyan7822_2340 plasmid maintenance system killer; plasmid maintenance system killer complement(1778130..1778423) Nitrosomonas sp. Is79A3 10933757 YP_004694879.1 CDS Nit79A3_1665 NC_015731.1 1778587 1779252 R hypothetical protein complement(1778587..1779252) Nitrosomonas sp. Is79A3 10933758 YP_004694880.1 CDS Nit79A3_1666 NC_015731.1 1779366 1780232 R KEGG: nit:NAL212_2310 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: YicC-like, N-terminal; Domain of unknown function DUF1732; hypothetical protein complement(1779366..1780232) Nitrosomonas sp. Is79A3 10933759 YP_004694881.1 CDS Nit79A3_1667 NC_015731.1 1780247 1781293 R KEGG: nit:NAL212_2309 hypothetical protein; hypothetical protein complement(1780247..1781293) Nitrosomonas sp. Is79A3 10933760 YP_004694882.1 CDS Nit79A3_1668 NC_015731.1 1781303 1782913 R TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; HAMAP: Peptide chain release factor 3; KEGG: nit:NAL212_2308 peptide chain release factor 3; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; peptide chain release factor 3 complement(1781303..1782913) Nitrosomonas sp. Is79A3 10933761 YP_004694883.1 CDS Nit79A3_1669 NC_015731.1 1782903 1784981 R SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: nit:NAL212_2307 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase complement(1782903..1784981) Nitrosomonas sp. Is79A3 10933762 YP_004694884.1 CDS Nit79A3_1670 NC_015731.1 1784978 1786492 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: nit:NAL212_2306 ABC-type transporter, integral membrane subunit; ABC transporter permease complement(1784978..1786492) Nitrosomonas sp. Is79A3 10933763 YP_004694885.1 CDS Nit79A3_1671 NC_015731.1 1787034 1787747 D KEGG: nit:NAL212_1590 hemolysin-type calcium-binding region; hypothetical protein 1787034..1787747 Nitrosomonas sp. Is79A3 10933764 YP_004694886.1 CDS Nit79A3_1672 NC_015731.1 1787902 1789065 D KEGG: nit:NAL212_2071 hypothetical protein; hypothetical protein 1787902..1789065 Nitrosomonas sp. Is79A3 10933765 YP_004694887.1 CDS Nit79A3_1673 NC_015731.1 1789111 1789686 R KEGG: nit:NAL212_1924 hypothetical protein; hypothetical protein complement(1789111..1789686) Nitrosomonas sp. Is79A3 10933766 YP_004694888.1 CDS Nit79A3_1674 NC_015731.1 1789779 1790318 R PFAM: Glutathione peroxidase; KEGG: nit:NAL212_1923 glutathione peroxidase; glutathione peroxidase complement(1789779..1790318) Nitrosomonas sp. Is79A3 10933767 YP_004694889.1 CDS Nit79A3_1675 NC_015731.1 1790390 1791649 R PFAM: Phosphate-selective porin O/P; KEGG: nit:NAL212_1922 phosphate-selective porin O and P; phosphate-selective porin O and P complement(1790390..1791649) Nitrosomonas sp. Is79A3 10933768 YP_004694890.1 CDS Nit79A3_1676 NC_015731.1 1791849 1793048 R PFAM: Protein of unknown function DUF214, permase predicted; KEGG: nit:NAL212_1921 hypothetical protein; hypothetical protein complement(1791849..1793048) Nitrosomonas sp. Is79A3 10933769 YP_004694891.1 CDS Nit79A3_1677 NC_015731.1 1793437 1794990 D hypothetical protein 1793437..1794990 Nitrosomonas sp. Is79A3 10933770 YP_004694892.1 CDS Nit79A3_1678 NC_015731.1 1795081 1796406 D KEGG: Extracellular ligand-binding receptor; hypothetical protein 1795081..1796406 Nitrosomonas sp. Is79A3 10933771 YP_004694893.1 CDS Nit79A3_1679 NC_015731.1 1796582 1797565 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: nit:NAL212_0168 endonuclease/exonuclease/phosphatase; hypothetical protein complement(1796582..1797565) Nitrosomonas sp. Is79A3 10933772 YP_004694894.1 CDS Nit79A3_1680 NC_015731.1 1797947 1798144 D KEGG: nit:NAL212_1957 hypothetical protein; hypothetical protein 1797947..1798144 Nitrosomonas sp. Is79A3 10933773 YP_004694895.1 CDS Nit79A3_1681 NC_015731.1 1798165 1799367 R PFAM: Protein of unknown function DUF214, permase predicted; KEGG: nit:NAL212_1955 hypothetical protein; hypothetical protein complement(1798165..1799367) Nitrosomonas sp. Is79A3 10933774 YP_004694896.1 CDS Nit79A3_1682 NC_015731.1 1799354 1800037 R KEGG: nit:NAL212_1954 phosphonate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter complement(1799354..1800037) Nitrosomonas sp. Is79A3 10933775 YP_004694897.1 CDS Nit79A3_1683 NC_015731.1 1800034 1801185 R KEGG: nit:NAL212_1953 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(1800034..1801185) Nitrosomonas sp. Is79A3 10933776 YP_004694898.1 CDS Nit79A3_1684 NC_015731.1 1801317 1802951 D KEGG: nit:NAL212_1952 DNA mismatch repair protein MutS domain-containing protein; PFAM: DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS domain-containing protein 1801317..1802951 Nitrosomonas sp. Is79A3 10933777 YP_004694899.1 CDS Nit79A3_1685 NC_015731.1 1802948 1803178 D KEGG: gpb:HDN1F_31430 hypothetical protein; hypothetical protein 1802948..1803178 Nitrosomonas sp. Is79A3 10933778 YP_004694900.1 CDS Nit79A3_1686 NC_015731.1 1803337 1804101 D KEGG: dat:HRM2_03850 ferric uptake regulation protein; ferric uptake regulation protein 1803337..1804101 Nitrosomonas sp. Is79A3 10933779 YP_004694901.1 CDS Nit79A3_1687 NC_015731.1 1804253 1805428 D TIGRFAM: Succinyl-CoA synthetase, beta subunit; HAMAP: Succinyl-CoA ligase [ADP-forming] subunit beta; KEGG: nit:NAL212_1323 succinyl-CoA synthetase, beta subunit; PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; Succinyl-CoA ligase (ADP-forming) subunit beta 1804253..1805428 Nitrosomonas sp. Is79A3 10933780 YP_004694902.1 CDS Nit79A3_1688 NC_015731.1 1805463 1806338 D KEGG: nit:NAL212_1322 succinyl-CoA synthetase, alpha subunit; TIGRFAM: Succinyl-CoA ligase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding; succinyl-CoA synthetase subunit alpha 1805463..1806338 Nitrosomonas sp. Is79A3 10933781 YP_004694903.1 CDS Nit79A3_1689 NC_015731.1 1806374 1806682 D KEGG: nit:NAL212_1321 hypothetical protein; hypothetical protein 1806374..1806682 Nitrosomonas sp. Is79A3 10933782 YP_004694904.1 CDS Nit79A3_1690 NC_015731.1 1806705 1808147 D KEGG: nit:NAL212_1320 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 1806705..1808147 Nitrosomonas sp. Is79A3 10933783 YP_004694905.1 CDS Nit79A3_1691 NC_015731.1 1808416 1809006 D PFAM: Cystathionine beta-synthase, core; KEGG: nit:NAL212_1319 CBS domain containing protein; CBS domain containing protein 1808416..1809006 Nitrosomonas sp. Is79A3 10933784 YP_004694906.1 CDS Nit79A3_1693 NC_015731.1 1809415 1810449 R KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase complement(1809415..1810449) Nitrosomonas sp. Is79A3 10933786 YP_004694907.1 CDS Nit79A3_1694 NC_015731.1 1810898 1813972 D PFAM: Patatin; KEGG: sus:Acid_6439 hypothetical protein; Patatin 1810898..1813972 Nitrosomonas sp. Is79A3 10933787 YP_004694908.1 CDS Nit79A3_1695 NC_015731.1 1814021 1815493 R KEGG: nit:NAL212_0544 anthranilate synthase component I; TIGRFAM: Anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; anthranilate synthase component I complement(1814021..1815493) Nitrosomonas sp. Is79A3 10933788 YP_004694909.1 CDS Nit79A3_1696 NC_015731.1 1815503 1816231 R KEGG: nit:NAL212_0545 phosphoglycolate phosphatase; TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; phosphoglycolate phosphatase complement(1815503..1816231) Nitrosomonas sp. Is79A3 10933789 YP_004694910.1 CDS Nit79A3_1697 NC_015731.1 1816277 1816954 R KEGG: nit:NAL212_0546 ribulose-phosphate 3-epimerase; TIGRFAM: Ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(1816277..1816954) Nitrosomonas sp. Is79A3 10933790 YP_004694911.1 CDS Nit79A3_1698 NC_015731.1 1817099 1817485 D KEGG: nit:NAL212_0549 ApaG domain-containing protein; HAMAP: Protein ApaG; PFAM: ApaG; Protein ApaG 1817099..1817485 Nitrosomonas sp. Is79A3 10933791 YP_004694912.1 CDS Nit79A3_1699 NC_015731.1 1817545 1818249 D PFAM: Tetrapyrrole methylase; KEGG: nit:NAL212_0550 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 1817545..1818249 Nitrosomonas sp. Is79A3 10933792 YP_004694913.1 CDS Nit79A3_1700 NC_015731.1 1818299 1818688 R KEGG: nit:NAL212_0551 lactoylglutathione lyase; TIGRFAM: Glyoxalase I; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase complement(1818299..1818688) Nitrosomonas sp. Is79A3 10933793 YP_004694914.1 CDS Nit79A3_1701 NC_015731.1 1818689 1818877 R PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: nit:NAL212_0552 rubredoxin-type Fe(Cys)4 protein; Rubredoxin-type Fe(Cys)4 protein complement(1818689..1818877) Nitrosomonas sp. Is79A3 10933794 YP_004694915.1 CDS Nit79A3_1702 NC_015731.1 1818930 1819805 D PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: nit:NAL212_0553 phosphomethylpyrimidine kinase; Phosphomethylpyrimidine kinase type-1 1818930..1819805 Nitrosomonas sp. Is79A3 10933795 YP_004694916.1 CDS Nit79A3_1703 NC_015731.1 1819786 1820418 D TIGRFAM: Thiamine monophosphate synthase; HAMAP: Thiamine-phosphate pyrophosphorylase; KEGG: nit:NAL212_0554 thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase; Thiamine-phosphate pyrophosphorylase 1819786..1820418 Nitrosomonas sp. Is79A3 10933796 YP_004694917.1 CDS Nit79A3_1704 NC_015731.1 1820467 1821747 D TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; HAMAP: Glutamate-1-semialdehyde 2,1-aminomutase; KEGG: nit:NAL212_0555 glutamate-1-semialdehyde-2,1-aminomutase; PFAM: Aminotransferase class-III; Glutamate-1-semialdehyde 2,1-aminomutase 1820467..1821747 Nitrosomonas sp. Is79A3 10933797 YP_004694918.1 CDS Nit79A3_1705 NC_015731.1 1821829 1822473 R PFAM: Cytochrome c, class I; KEGG: nit:NAL212_0556 cytochrome c class I; cytochrome c class I complement(1821829..1822473) Nitrosomonas sp. Is79A3 10933798 YP_004694919.1 CDS Nit79A3_1706 NC_015731.1 1822607 1823203 D KEGG: nit:NAL212_0557 sporulation domain-containing protein; sporulation domain-containing protein 1822607..1823203 Nitrosomonas sp. Is79A3 10933799 YP_004694920.1 CDS Nit79A3_1707 NC_015731.1 1823302 1824108 D KEGG: nit:NAL212_0558 methionine aminopeptidase, type I; TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; PFAM: Peptidase M24, structural domain; methionine aminopeptidase, type I 1823302..1824108 Nitrosomonas sp. Is79A3 10933800 YP_004694921.1 CDS Nit79A3_1708 NC_015731.1 1824136 1824873 D TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: nit:NAL212_0559 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Ribonuclease PH 1824136..1824873 Nitrosomonas sp. Is79A3 10933801 YP_004694922.1 CDS Nit79A3_1709 NC_015731.1 1824866 1825468 D TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase rdgB; KEGG: nit:NAL212_0560 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; PFAM: Ham1-like protein; Nucleoside-triphosphatase rdgB 1824866..1825468 Nitrosomonas sp. Is79A3 10933802 YP_004694923.1 CDS Nit79A3_1710 NC_015731.1 1825869 1826102 D KEGG: nit:NAL212_0958 RNA recognition motif domain containing protein; hypothetical protein 1825869..1826102 Nitrosomonas sp. Is79A3 10933803 YP_004694924.1 CDS Nit79A3_1711 NC_015731.1 1826215 1826322 D hypothetical protein 1826215..1826322 Nitrosomonas sp. Is79A3 10933804 YP_004694925.1 CDS Nit79A3_1712 NC_015731.1 1826462 1826749 D hypothetical protein 1826462..1826749 Nitrosomonas sp. Is79A3 10933805 YP_004694926.1 CDS Nit79A3_1713 NC_015731.1 1827123 1827965 R manually curated; TIGRFAM: S-formylglutathione hydrolase; KEGG: nit:NAL212_0567 S-formylglutathione hydrolase; PFAM: esterase; S-formylglutathione hydrolase complement(1827123..1827965) Nitrosomonas sp. Is79A3 10933806 YP_004694927.1 CDS Nit79A3_1714 NC_015731.1 1827968 1829074 R KEGG: nit:NAL212_0568 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase complement(1827968..1829074) Nitrosomonas sp. Is79A3 10933807 YP_004694928.1 CDS Nit79A3_1715 NC_015731.1 1829074 1829574 R KEGG: nit:NAL212_0569 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase complement(1829074..1829574) Nitrosomonas sp. Is79A3 10933808 YP_004694929.1 CDS Nit79A3_1716 NC_015731.1 1830033 1830350 D KEGG: nit:NAL212_1778 hypothetical protein; hypothetical protein 1830033..1830350 Nitrosomonas sp. Is79A3 10933809 YP_004694930.1 CDS Nit79A3_1717 NC_015731.1 1830491 1830970 R PFAM: YkuD domain; KEGG: nit:NAL212_0409 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(1830491..1830970) Nitrosomonas sp. Is79A3 10933810 YP_004694931.1 CDS Nit79A3_1718 NC_015731.1 1830960 1831451 R PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: nit:NAL212_0408 CMP/dCMP deaminase zinc-binding protein; CMP/dCMP deaminase zinc-binding protein complement(1830960..1831451) Nitrosomonas sp. Is79A3 10933811 YP_004694932.1 CDS Nit79A3_1719 NC_015731.1 1831607 1832506 D KEGG: nit:NAL212_0407 protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific; TIGRFAM: Ribosomal protein L3-specific, glutamine-N5-methyltransferase; Modification methylase HemK; PFAM: Methyltransferase small; protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific 1831607..1832506 Nitrosomonas sp. Is79A3 10933812 YP_004694933.1 CDS Nit79A3_1720 NC_015731.1 1832638 1832895 D KEGG: nit:NAL212_0566 hypothetical protein; hypothetical protein 1832638..1832895 Nitrosomonas sp. Is79A3 10933813 YP_004694934.1 CDS Nit79A3_1721 NC_015731.1 1832892 1833116 D KEGG: nit:NAL212_0565 hypothetical protein; hypothetical protein 1832892..1833116 Nitrosomonas sp. Is79A3 10933814 YP_004694935.1 CDS Nit79A3_1722 NC_015731.1 1833147 1833833 D KEGG: rcu:RCOM_0354920 hypothetical protein; hypothetical protein 1833147..1833833 Nitrosomonas sp. Is79A3 10933815 YP_004694936.1 CDS Nit79A3_1723 NC_015731.1 1834024 1834863 R TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: nit:NAL212_1615 pseudouridine synthase Rsu; SMART: RNA-binding S4; pseudouridine synthase complement(1834024..1834863) Nitrosomonas sp. Is79A3 10933816 YP_004694937.1 CDS Nit79A3_1724 NC_015731.1 1835080 1840581 R KEGG: nit:NAL212_1616 hemolysin-type calcium-binding region; Hemolysin-type calcium-binding protein complement(1835080..1840581) Nitrosomonas sp. Is79A3 10933817 YP_004694938.1 CDS Nit79A3_1725 NC_015731.1 1840719 1841042 R TIGRFAM: Uncharacterised protein family UPF0133; HAMAP: Uncharacterised protein family UPF0133; KEGG: nit:NAL212_1617 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; hypothetical protein complement(1840719..1841042) Nitrosomonas sp. Is79A3 10933818 YP_004694939.1 CDS Nit79A3_1726 NC_015731.1 1841057 1842661 R TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: ATPase, AAA-type, core; KEGG: nit:NAL212_1618 DNA polymerase III, subunits gamma and tau; SMART: ATPase, AAA+ type, core; DNA polymerase III subunits gamma and tau complement(1841057..1842661) Nitrosomonas sp. Is79A3 10933819 YP_004694940.1 CDS Nit79A3_1727 NC_015731.1 1842976 1844133 D KEGG: nmu:Nmul_A1663 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 1842976..1844133 Nitrosomonas sp. Is79A3 10933821 YP_004694941.1 CDS Nit79A3_1728 NC_015731.1 1844231 1845685 D TIGRFAM: RecB family nuclease, TM0106, KEGG: nit:NAL212_1619 RecB family nuclease; RecB family nuclease 1844231..1845685 Nitrosomonas sp. Is79A3 10933822 YP_004694942.1 CDS Nit79A3_1729 NC_015731.1 1845729 1847168 R KEGG: nit:NAL212_1620 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; Nucleotidyl transferase; mannose-1-phosphate guanylyltransferase complement(1845729..1847168) Nitrosomonas sp. Is79A3 10933823 YP_004694943.1 CDS Nit79A3_1730 NC_015731.1 1847595 1848857 D KEGG: nit:NAL212_0828 hypothetical protein; hypothetical protein 1847595..1848857 Nitrosomonas sp. Is79A3 10933824 YP_004694944.1 CDS Nit79A3_1731 NC_015731.1 1849035 1850264 D hypothetical protein 1849035..1850264 Nitrosomonas sp. Is79A3 10933825 YP_004694945.1 CDS Nit79A3_1732 NC_015731.1 1850160 1850387 R hypothetical protein complement(1850160..1850387) Nitrosomonas sp. Is79A3 10933826 YP_004694946.1 CDS Nit79A3_1733 NC_015731.1 1850457 1852262 R KEGG: nit:NAL212_1406 hypothetical protein; hypothetical protein complement(1850457..1852262) Nitrosomonas sp. Is79A3 10933827 YP_004694947.1 CDS Nit79A3_1734 NC_015731.1 1852393 1853790 D PFAM: DNA-repair protein, UmuC-like; KEGG: nit:NAL212_2528 DNA-directed DNA polymerase; UMUC domain-containing protein DNA-repair protein 1852393..1853790 Nitrosomonas sp. Is79A3 10933828 YP_004694948.1 CDS Nit79A3_1735 NC_015731.1 1853855 1855219 D PFAM: Aldehyde dehydrogenase; KEGG: nit:NAL212_2796 succinate-semialdehyde dehydrogenase (NAD(P)(+)); aldehyde dehydrogenase 1853855..1855219 Nitrosomonas sp. Is79A3 10933829 YP_004694949.1 CDS Nit79A3_1736 NC_015731.1 1855308 1856324 D PFAM: Sulphatase-modifying factor; KEGG: mms:mma_1908 hypothetical protein; sulfatase-modifying factor protein 1855308..1856324 Nitrosomonas sp. Is79A3 10933830 YP_004694950.1 CDS Nit79A3_1737 NC_015731.1 1856504 1856956 R PFAM: Chromate resistance exported protein; KEGG: pop:POPTR_946650 hypothetical protein; Chromate resistance exported protein complement(1856504..1856956) Nitrosomonas sp. Is79A3 10933831 YP_004694951.1 CDS Nit79A3_1738 NC_015731.1 1856965 1858329 R KEGG: dar:Daro_3555 chromate transporter; TIGRFAM: Chromate transporter; PFAM: Chromate transporter region; chromate transporter complement(1856965..1858329) Nitrosomonas sp. Is79A3 10933832 YP_004694952.1 CDS Nit79A3_1739 NC_015731.1 1858329 1859267 R PFAM: Chromate resistance exported protein; KEGG: rfr:Rfer_2446 chromate resistance exported protein; Chromate resistance exported protein complement(1858329..1859267) Nitrosomonas sp. Is79A3 10933833 YP_004694953.1 CDS Nit79A3_1740 NC_015731.1 1859450 1860058 D PFAM: NADH:ubiquinone oxidoreductase intermediate-associated protein 30; KEGG: gca:Galf_1674 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 1859450..1860058 Nitrosomonas sp. Is79A3 10933834 YP_004694954.1 CDS Nit79A3_1741 NC_015731.1 1860106 1861836 R PFAM: Dak kinase; Dak phosphatase; KEGG: nit:NAL212_1378 glycerone kinase; Dak kinase complement(1860106..1861836) Nitrosomonas sp. Is79A3 10933835 YP_004694955.1 CDS Nit79A3_1742 NC_015731.1 1861948 1863165 R PFAM: Metallophosphoesterase; metallophosphoesterase complement(1861948..1863165) Nitrosomonas sp. Is79A3 10933836 YP_004694956.1 CDS Nit79A3_1743 NC_015731.1 1864225 1865619 R KEGG: nit:NAL212_0934 glutamyl-tRNA synthetase; TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl-tRNA synthetase complement(1864225..1865619) Nitrosomonas sp. Is79A3 10933839 YP_004694957.1 CDS Nit79A3_1744 NC_015731.1 1865817 1867403 D KEGG: nit:NAL212_0935 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated; TIGRFAM: Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated; PFAM: AMP-dependent synthetase/ligase; acyl-CoA ligase 1865817..1867403 Nitrosomonas sp. Is79A3 10933840 YP_004694958.1 CDS Nit79A3_1745 NC_015731.1 1867400 1868635 D KEGG: nit:NAL212_0936 pyridoxal-dependent decarboxylase, exosortase system type 1 associated; TIGRFAM: Pyridoxal-dependent decarboxylase, exosortase system type 1 associated; PFAM: Orn/DAP/Arg decarboxylase 2; pyridoxal-dependent decarboxylase, exosortase system type 1 associated 1867400..1868635 Nitrosomonas sp. Is79A3 10933841 YP_004694959.1 CDS Nit79A3_1746 NC_015731.1 1869076 1869846 D TIGRFAM: PEP-CTERM/exosortase system-associated acyltransferase; KEGG: nit:NAL212_0937 PEP-Cterm/exosortase system-associated acyltransferase; PEP-CTERM/exosortase system-associated acyltransferase 1869076..1869846 Nitrosomonas sp. Is79A3 10933842 YP_004694960.1 CDS Nit79A3_1747 NC_015731.1 1869915 1870361 D KEGG: nit:NAL212_0938 hypothetical protein; hypothetical protein 1869915..1870361 Nitrosomonas sp. Is79A3 10933843 YP_004694961.1 CDS Nit79A3_1748 NC_015731.1 1870384 1871739 D KEGG: nit:NAL212_0939 hypothetical protein; hypothetical protein 1870384..1871739 Nitrosomonas sp. Is79A3 10933844 YP_004694962.1 CDS Nit79A3_1749 NC_015731.1 1871756 1874668 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: nit:NAL212_0940 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1871756..1874668 Nitrosomonas sp. Is79A3 10933845 YP_004694963.1 CDS Nit79A3_1750 NC_015731.1 1874866 1876263 R PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: nit:NAL212_1874 beta-Casp domain; RNA-metabolising metallo-beta-lactamase complement(1874866..1876263) Nitrosomonas sp. Is79A3 10933846 YP_004694964.1 CDS Nit79A3_1751 NC_015731.1 1876287 1877654 R KEGG: nit:NAL212_1873 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(1876287..1877654) Nitrosomonas sp. Is79A3 10933847 YP_004694965.1 CDS Nit79A3_1752 NC_015731.1 1877791 1879131 D KEGG: nit:NAL212_1872 hypothetical protein; hypothetical protein 1877791..1879131 Nitrosomonas sp. Is79A3 10933848 YP_004694966.1 CDS Nit79A3_1753 NC_015731.1 1879397 1880773 D KEGG: nit:NAL212_1279 adenylosuccinate lyase; TIGRFAM: Adenylosuccinate lyase; PFAM: Adenylosuccinate lyase C-terminal; Fumarate lyase; adenylosuccinate lyase 1879397..1880773 Nitrosomonas sp. Is79A3 10933849 YP_004694967.1 CDS Nit79A3_1754 NC_015731.1 1880913 1881506 D KEGG: nit:NAL212_1280 GrpE protein; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor; Protein grpE 1880913..1881506 Nitrosomonas sp. Is79A3 10933850 YP_004694968.1 CDS Nit79A3_1755 NC_015731.1 1881574 1883508 D TIGRFAM: Chaperone DnaK; HAMAP: Chaperone DnaK; KEGG: nit:NAL212_1281 chaperone protein DnaK; PFAM: Heat shock protein 70; molecular chaperone DnaK 1881574..1883508 Nitrosomonas sp. Is79A3 10933851 YP_004694969.1 CDS Nit79A3_1756 NC_015731.1 1883656 1884768 D SMART: Heat shock protein DnaJ, N-terminal; TIGRFAM: Chaperone DnaJ; KEGG: nit:NAL212_1282 chaperone protein DnaJ; HAMAP: Chaperone protein dnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, cysteine-rich region; Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 1883656..1884768 Nitrosomonas sp. Is79A3 10933852 YP_004694970.1 CDS Nit79A3_1757 NC_015731.1 1885125 1886534 D PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 1885125..1886534 Nitrosomonas sp. Is79A3 10933853 YP_004694971.1 CDS Nit79A3_1761 NC_015731.1 1888863 1889366 D KEGG: afe:Lferr_0146 hypothetical protein; hypothetical protein 1888863..1889366 Nitrosomonas sp. Is79A3 10933856 YP_004694972.1 CDS Nit79A3_1762 NC_015731.1 1889339 1889923 D KEGG: afe:Lferr_0145 transposase; hypothetical protein 1889339..1889923 Nitrosomonas sp. Is79A3 10933857 YP_004694973.1 CDS Nit79A3_1763 NC_015731.1 1890187 1890480 R PFAM: Transposase IS3/IS911; KEGG: gca:Galf_0832 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(1890187..1890480) Nitrosomonas sp. Is79A3 10933858 YP_004694974.1 CDS Nit79A3_1764 NC_015731.1 1890503 1891396 R PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; KEGG: afr:AFE_3183 ISAfe1, transposase; transposase IS116/IS110/IS902 family protein complement(1890503..1891396) Nitrosomonas sp. Is79A3 10933859 YP_004694975.1 CDS Nit79A3_1765 NC_015731.1 1892065 1892604 D hypothetical protein 1892065..1892604 Nitrosomonas sp. Is79A3 10933860 YP_004694976.1 CDS Nit79A3_1766 NC_015731.1 1892578 1893996 R PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein complement(1892578..1893996) Nitrosomonas sp. Is79A3 10933861 YP_004694977.1 CDS Nit79A3_1767 NC_015731.1 1894481 1894735 D hypothetical protein 1894481..1894735 Nitrosomonas sp. Is79A3 10933862 YP_004694978.1 CDS Nit79A3_1768 NC_015731.1 1894741 1895169 R KEGG: nit:NAL212_1665 hypothetical protein; hypothetical protein complement(1894741..1895169) Nitrosomonas sp. Is79A3 10933863 YP_004694979.1 CDS Nit79A3_1769 NC_015731.1 1895858 1896424 R hypothetical protein complement(1895858..1896424) Nitrosomonas sp. Is79A3 10933864 YP_004694980.1 CDS Nit79A3_1770 NC_015731.1 1896469 1898007 R PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein complement(1896469..1898007) Nitrosomonas sp. Is79A3 10933865 YP_004694981.1 CDS Nit79A3_1771 NC_015731.1 1898141 1899253 R KEGG: nit:NAL212_2316 magnesium and cobalt transport protein CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; magnesium and cobalt transport protein CorA complement(1898141..1899253) Nitrosomonas sp. Is79A3 10933866 YP_004694982.1 CDS Nit79A3_1772 NC_015731.1 1899407 1899604 R KEGG: nit:NAL212_2315 hypothetical protein; hypothetical protein complement(1899407..1899604) Nitrosomonas sp. Is79A3 10933867 YP_004694983.1 CDS Nit79A3_1773 NC_015731.1 1899804 1900382 D KEGG: nit:NAL212_2314 hypothetical protein; hypothetical protein 1899804..1900382 Nitrosomonas sp. Is79A3 10933868 YP_004694984.1 CDS Nit79A3_1774 NC_015731.1 1900726 1901619 R KEGG: nit:NAL212_1830 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase complement(1900726..1901619) Nitrosomonas sp. Is79A3 10933869 YP_004694985.1 CDS Nit79A3_1775 NC_015731.1 1901698 1902723 R KEGG: nit:NAL212_1831 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase complement(1901698..1902723) Nitrosomonas sp. Is79A3 10933870 YP_004694986.1 CDS Nit79A3_1776 NC_015731.1 1902799 1903755 R KEGG: nit:NAL212_1832 hypothetical protein; hypothetical protein complement(1902799..1903755) Nitrosomonas sp. Is79A3 10933871 YP_004694987.1 CDS Nit79A3_1777 NC_015731.1 1903828 1905738 R PFAM: Adenylylsulphate kinase, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; TIGRFAM: Sulphate adenylyltransferase, large subunit; Adenylylsulphate kinase, C-terminal; HAMAP: Sulfate adenylyltransferase subunit 1; KEGG: nit:NAL212_1833 sulfate adenylyltransferase, large subunit; Sulfate adenylyltransferase subunit 1 complement(1903828..1905738) Nitrosomonas sp. Is79A3 10933872 YP_004694988.1 CDS Nit79A3_1778 NC_015731.1 1905738 1906634 R TIGRFAM: Sulphate adenylyltransferase, small subunit; HAMAP: Sulfate adenylyltransferase subunit 2; KEGG: nit:NAL212_1834 sulfate adenylyltransferase, small subunit; PFAM: Phosphoadenosine phosphosulphate reductase; Sulfate adenylyltransferase subunit 2 complement(1905738..1906634) Nitrosomonas sp. Is79A3 10933873 YP_004694989.1 CDS Nit79A3_1780 NC_015731.1 1908118 1909248 R KEGG: hoh:Hoch_1738 hypothetical protein; hypothetical protein complement(1908118..1909248) Nitrosomonas sp. Is79A3 10933876 YP_004694990.1 CDS Nit79A3_1781 NC_015731.1 1909982 1910587 D KEGG: nmu:Nmul_A1259 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1909982..1910587 Nitrosomonas sp. Is79A3 10933877 YP_004694991.1 CDS Nit79A3_1782 NC_015731.1 1911010 1912071 D KEGG: nit:NAL212_0962 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1911010..1912071 Nitrosomonas sp. Is79A3 10933878 YP_004694992.1 CDS Nit79A3_1783 NC_015731.1 1912525 1913292 R KEGG: nit:NAL212_1086 hypothetical protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal; hypothetical protein complement(1912525..1913292) Nitrosomonas sp. Is79A3 10933879 YP_004694993.1 CDS Nit79A3_1784 NC_015731.1 1913298 1913675 R KEGG: nit:NAL212_1085 hypothetical protein; hypothetical protein complement(1913298..1913675) Nitrosomonas sp. Is79A3 10933880 YP_004694994.1 CDS Nit79A3_1785 NC_015731.1 1913690 1915798 R TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; HAMAP: Methionyl-tRNA synthetase; KEGG: nit:NAL212_1084 methionyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding region; Methionyl-tRNA synthetase complement(1913690..1915798) Nitrosomonas sp. Is79A3 10933881 YP_004694995.1 CDS Nit79A3_1786 NC_015731.1 1915922 1917010 D PFAM: ATPase-like, ParA/MinD; Protein of unknown function DUF59; KEGG: nit:NAL212_1083 ATPase-like, ParA/MinD; chromosome partitioning protein ParA 1915922..1917010 Nitrosomonas sp. Is79A3 10933882 YP_004694996.1 CDS Nit79A3_1787 NC_015731.1 1917024 1917590 D manually curated; TIGRFAM: Deoxycytidine triphosphate deaminase; KEGG: nit:NAL212_1082 deoxycytidine triphosphate deaminase; HAMAP: Deoxycytidine triphosphate deaminase; Deoxycytidine triphosphate deaminase 1917024..1917590 Nitrosomonas sp. Is79A3 10933883 YP_004694997.1 CDS Nit79A3_1788 NC_015731.1 1917605 1918888 D TIGRFAM: hypothetical protein; KEGG: nit:NAL212_1081 hypothetical protein; hypothetical protein 1917605..1918888 Nitrosomonas sp. Is79A3 10933884 YP_004694998.1 CDS Nit79A3_1789 NC_015731.1 1919255 1920430 D PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: nit:NAL212_1080 ornithine decarboxylase; Orn/DAP/Arg decarboxylase 2 1919255..1920430 Nitrosomonas sp. Is79A3 10933885 YP_004694999.1 CDS Nit79A3_1790 NC_015731.1 1920547 1921065 R PFAM: Dihydrofolate reductase region; KEGG: nit:NAL212_1079 dihydrofolate reductase region; dihydrofolate reductase region complement(1920547..1921065) Nitrosomonas sp. Is79A3 10933886 YP_004695000.1 CDS Nit79A3_1791 NC_015731.1 1921062 1921856 R TIGRFAM: Thymidylate synthase, C-terminal; HAMAP: Thymidylate synthase; KEGG: nit:NAL212_1078 thymidylate synthase; PFAM: Thymidylate synthase, C-terminal; thymidylate synthase complement(1921062..1921856) Nitrosomonas sp. Is79A3 10933887 YP_004695001.1 CDS Nit79A3_1792 NC_015731.1 1922026 1923483 D PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; KEGG: nit:NAL212_1077 peptidase M17 leucyl aminopeptidase domain-containing protein; peptidase M17 leucyl aminopeptidase domain-containing protein 1922026..1923483 Nitrosomonas sp. Is79A3 10933888 YP_004695002.1 CDS Nit79A3_1793 NC_015731.1 1923506 1924795 R KEGG: nit:NAL212_1076 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; lytic transglycosylase complement(1923506..1924795) Nitrosomonas sp. Is79A3 10933889 YP_004695003.1 CDS Nit79A3_1794 NC_015731.1 1924951 1925370 R TIGRFAM: Nitrile oxidoreductase, NADPH-dependent, QueF; HAMAP: Nitrile oxidoreductase, NADPH-dependent, QueF; KEGG: nit:NAL212_1075 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; NADPH-dependent 7-cyano-7-deazaguanine reductase complement(1924951..1925370) Nitrosomonas sp. Is79A3 10933890 YP_004695004.1 CDS Nit79A3_1795 NC_015731.1 1925465 1929010 D KEGG: nit:NAL212_1074 chromosome segregation protein SMC; TIGRFAM: Chromosome segregation protein SMC; PFAM: RecF/RecN/SMC protein, N-terminal; SMCs flexible hinge; chromosome segregation protein SMC 1925465..1929010 Nitrosomonas sp. Is79A3 10933891 YP_004695005.1 CDS Nit79A3_1796 NC_015731.1 1929097 1930281 D SMART: ZipA, C-terminal FtsZ-binding region; KEGG: nit:NAL212_1073 ZipA FtsZ-binding region protein; ZipA FtsZ-binding region protein 1929097..1930281 Nitrosomonas sp. Is79A3 10933892 YP_004695006.1 CDS Nit79A3_1797 NC_015731.1 1930533 1930778 D PFAM: Iron sulphur domain-containing, CDGSH-type; KEGG: bra:BRADO2030 hypothetical protein; Iron sulfur domain-containing, CDGSH-type 1930533..1930778 Nitrosomonas sp. Is79A3 10933893 YP_004695007.1 CDS Nit79A3_1798 NC_015731.1 1930913 1931110 D KEGG: nit:NAL212_1072 hypothetical protein; hypothetical protein 1930913..1931110 Nitrosomonas sp. Is79A3 10933894 YP_004695008.1 CDS Nit79A3_1799 NC_015731.1 1931103 1931402 D PFAM: Cell division protein ZapA-like; KEGG: nit:NAL212_1071 hypothetical protein; hypothetical protein 1931103..1931402 Nitrosomonas sp. Is79A3 10933895 YP_004695009.1 CDS Nit79A3_1800 NC_015731.1 1931683 1932309 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: ipa:Isop_0707 HAD-superfamily hydrolase; HAD-superfamily hydrolase 1931683..1932309 Nitrosomonas sp. Is79A3 10933897 YP_004695010.1 CDS Nit79A3_1801 NC_015731.1 1932349 1933002 R KEGG: nit:NAL212_1677 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase complement(1932349..1933002) Nitrosomonas sp. Is79A3 10933898 YP_004695011.1 CDS Nit79A3_1802 NC_015731.1 1933117 1933557 D PFAM: Uncharacterised protein family UPF0310; KEGG: nit:NAL212_1678 hypothetical protein; hypothetical protein 1933117..1933557 Nitrosomonas sp. Is79A3 10933899 YP_004695012.1 CDS Nit79A3_1803 NC_015731.1 1933607 1934404 D PFAM: Protein of unknown function DUF81; KEGG: nit:NAL212_1679 hypothetical protein; hypothetical protein 1933607..1934404 Nitrosomonas sp. Is79A3 10933900 YP_004695013.1 CDS Nit79A3_1805 NC_015731.1 1935241 1937142 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: nit:NAL212_0942 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase complement(1935241..1937142) Nitrosomonas sp. Is79A3 10933902 YP_004695014.1 CDS Nit79A3_1806 NC_015731.1 1937453 1938448 D PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: nit:NAL212_1555 NADPH:quinone reductase; alcohol dehydrogenase 1937453..1938448 Nitrosomonas sp. Is79A3 10933903 YP_004695015.1 CDS Nit79A3_1807 NC_015731.1 1938745 1940049 D PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 1938745..1940049 Nitrosomonas sp. Is79A3 10933904 YP_004695016.1 CDS Nit79A3_1809 NC_015731.1 1942690 1943925 D KEGG: nit:NAL212_2625 hypothetical protein; hypothetical protein 1942690..1943925 Nitrosomonas sp. Is79A3 10933906 YP_004695017.1 CDS Nit79A3_1812 NC_015731.1 1945730 1946824 R PFAM: Glycosyl transferase, group 1; KEGG: nit:NAL212_1316 glycosyl transferase group 1; group 1 glycosyl transferase complement(1945730..1946824) Nitrosomonas sp. Is79A3 10933909 YP_004695018.1 CDS Nit79A3_1813 NC_015731.1 1946828 1947742 R KEGG: nit:NAL212_1318 sulfotransferase; sulfotransferase complement(1946828..1947742) Nitrosomonas sp. Is79A3 10933910 YP_004695019.1 CDS Nit79A3_1815 NC_015731.1 1948679 1949995 R PFAM: Transposase, IS4-like; KEGG: gur:Gura_1234 hypothetical protein; transposase IS4 family protein complement(1948679..1949995) Nitrosomonas sp. Is79A3 10933912 YP_004695020.1 CDS Nit79A3_1816 NC_015731.1 1950188 1950520 D hypothetical protein 1950188..1950520 Nitrosomonas sp. Is79A3 10933913 YP_004695021.1 CDS Nit79A3_1817 NC_015731.1 1950609 1951913 R PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein complement(1950609..1951913) Nitrosomonas sp. Is79A3 10933914 YP_004695022.1 CDS Nit79A3_1818 NC_015731.1 1952108 1952728 R KEGG: nit:NAL212_2982 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(1952108..1952728) Nitrosomonas sp. Is79A3 10933915 YP_004695023.1 CDS Nit79A3_1819 NC_015731.1 1953149 1953571 R KEGG: nit:NAL212_0086 hypothetical protein; hypothetical protein complement(1953149..1953571) Nitrosomonas sp. Is79A3 10933916 YP_004695024.1 CDS Nit79A3_1820 NC_015731.1 1954045 1954539 R KEGG: noc:Noc_1605 hypothetical protein; TIGRFAM: YbhB/YbcL; PFAM: Phosphatidylethanolamine-binding protein PEBP; hypothetical protein complement(1954045..1954539) Nitrosomonas sp. Is79A3 10933917 YP_004695025.1 CDS Nit79A3_1821 NC_015731.1 1954701 1955351 D PFAM: Nitroreductase-like; KEGG: rfr:Rfer_0382 hypothetical protein; nitroreductase 1954701..1955351 Nitrosomonas sp. Is79A3 10933918 YP_004695026.1 CDS Nit79A3_1822 NC_015731.1 1955471 1955887 D PFAM: Class I peptide chain release factor; KEGG: nit:NAL212_2262 class I peptide chain release factor; Class I peptide chain release factor 1955471..1955887 Nitrosomonas sp. Is79A3 10933919 YP_004695027.1 CDS Nit79A3_1823 NC_015731.1 1956080 1956673 D PFAM: Protein of unknown function DUF1415; KEGG: slt:Slit_2349 hypothetical protein; hypothetical protein 1956080..1956673 Nitrosomonas sp. Is79A3 10933920 YP_004695028.1 CDS Nit79A3_1824 NC_015731.1 1956676 1957656 D KEGG: slt:Slit_2348 aminoglycoside phosphotransferase; manually curated; PFAM: Aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 1956676..1957656 Nitrosomonas sp. Is79A3 10933921 YP_004695029.1 CDS Nit79A3_1825 NC_015731.1 1958007 1959161 R KEGG: dol:Dole_2268 hypothetical protein; hypothetical protein complement(1958007..1959161) Nitrosomonas sp. Is79A3 10933922 YP_004695030.1 CDS Nit79A3_1826 NC_015731.1 1959430 1959645 R KEGG: nit:NAL212_3025 viral A-type inclusion protein repeat containing protein; viral A-type inclusion protein repeat containing protein complement(1959430..1959645) Nitrosomonas sp. Is79A3 10933923 YP_004695031.1 CDS Nit79A3_1827 NC_015731.1 1959593 1959865 R KEGG: ctt:CtCNB1_2990 hypothetical protein; hypothetical protein complement(1959593..1959865) Nitrosomonas sp. Is79A3 10933924 YP_004695032.1 CDS Nit79A3_1828 NC_015731.1 1959873 1960244 R KEGG: nit:NAL212_3069 hypothetical protein; hypothetical protein complement(1959873..1960244) Nitrosomonas sp. Is79A3 10933925 YP_004695033.1 CDS Nit79A3_1829 NC_015731.1 1960241 1961857 R KEGG: dak:DaAHT2_2156 hypothetical protein; hypothetical protein complement(1960241..1961857) Nitrosomonas sp. Is79A3 10933926 YP_004695034.1 CDS Nit79A3_1830 NC_015731.1 1961854 1962267 R KEGG: nit:NAL212_3066 hypothetical protein; hypothetical protein complement(1961854..1962267) Nitrosomonas sp. Is79A3 10933927 YP_004695035.1 CDS Nit79A3_1831 NC_015731.1 1962270 1962503 R KEGG: net:Neut_1124 hypothetical protein; hypothetical protein complement(1962270..1962503) Nitrosomonas sp. Is79A3 10933928 YP_004695036.1 CDS Nit79A3_1832 NC_015731.1 1962672 1963214 R KEGG: pna:Pnap_2646 hypothetical protein; hypothetical protein complement(1962672..1963214) Nitrosomonas sp. Is79A3 10933929 YP_004695037.1 CDS Nit79A3_1833 NC_015731.1 1963314 1964525 R PFAM: Integrase, catalytic core, phage; KEGG: net:Neut_1755 phage integrase; integrase complement(1963314..1964525) Nitrosomonas sp. Is79A3 10933930 YP_004695038.1 CDS Nit79A3_1834 NC_015731.1 1965231 1965524 R KEGG: nit:NAL212_2788 hypothetical protein; hypothetical protein complement(1965231..1965524) Nitrosomonas sp. Is79A3 10933931 YP_004695039.1 CDS Nit79A3_1835 NC_015731.1 1966264 1966410 D hypothetical protein 1966264..1966410 Nitrosomonas sp. Is79A3 10933932 YP_004695040.1 CDS Nit79A3_1836 NC_015731.1 1966486 1966806 R KEGG: nit:NAL212_0956 hypothetical protein; hypothetical protein complement(1966486..1966806) Nitrosomonas sp. Is79A3 10933933 YP_004695041.1 CDS Nit79A3_1837 NC_015731.1 1966833 1967741 R KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit complement(1966833..1967741) Nitrosomonas sp. Is79A3 10933934 YP_004695042.1 CDS Nit79A3_1838 NC_015731.1 1967738 1968061 R PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein complement(1967738..1968061) Nitrosomonas sp. Is79A3 10933935 YP_004695043.1 CDS Nit79A3_1839 NC_015731.1 1968092 1968445 R hypothetical protein complement(1968092..1968445) Nitrosomonas sp. Is79A3 10933936 YP_004695044.1 CDS Nit79A3_1840 NC_015731.1 1968589 1971267 R PFAM: Glycosyl transferase, family 2; GtrA-like protein; Glycosyl transferase, family 39; KEGG: nmu:Nmul_A1764 dolichyl-phosphate beta-D-mannosyltransferase; glycosyl transferase 2 complement(1968589..1971267) Nitrosomonas sp. Is79A3 10933937 YP_004695045.1 CDS Nit79A3_1841 NC_015731.1 1971405 1971896 R hypothetical protein complement(1971405..1971896) Nitrosomonas sp. Is79A3 10933938 YP_004695046.1 CDS Nit79A3_1842 NC_015731.1 1971932 1972843 R KEGG: nda:Ndas_3717 methyltransferase type 12; hypothetical protein complement(1971932..1972843) Nitrosomonas sp. Is79A3 10933939 YP_004695047.1 CDS Nit79A3_1843 NC_015731.1 1972871 1974238 R KEGG: nmu:Nmul_A0618 cytochrome c1 signal peptide protein; hypothetical protein complement(1972871..1974238) Nitrosomonas sp. Is79A3 10933940 YP_004695048.1 CDS Nit79A3_1844 NC_015731.1 1974625 1975059 D KEGG: nmu:Nmul_A1496 hypothetical protein; hypothetical protein 1974625..1975059 Nitrosomonas sp. Is79A3 10933941 YP_004695049.1 CDS Nit79A3_1846 NC_015731.1 1976532 1977296 D manually curated; KEGG: nit:NAL212_0007 hypothetical protein; hypothetical protein 1976532..1977296 Nitrosomonas sp. Is79A3 10933943 YP_004695050.1 CDS Nit79A3_1847 NC_015731.1 1977323 1977673 D KEGG: nit:NAL212_0008 hypothetical protein; hypothetical protein 1977323..1977673 Nitrosomonas sp. Is79A3 10933944 YP_004695051.1 CDS Nit79A3_1848 NC_015731.1 1977748 1978098 R KEGG: nit:NAL212_0009 hypothetical protein; hypothetical protein complement(1977748..1978098) Nitrosomonas sp. Is79A3 10933945 YP_004695052.1 CDS Nit79A3_1849 NC_015731.1 1978169 1978279 R hypothetical protein complement(1978169..1978279) Nitrosomonas sp. Is79A3 10933946 YP_004695053.1 CDS Nit79A3_1851 NC_015731.1 1979609 1979932 D PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein 1979609..1979932 Nitrosomonas sp. Is79A3 10933948 YP_004695054.1 CDS Nit79A3_1852 NC_015731.1 1979929 1980837 D KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 1979929..1980837 Nitrosomonas sp. Is79A3 10933949 YP_004695055.1 CDS Nit79A3_1853 NC_015731.1 1980834 1981058 R KEGG: net:Neut_2405 transposase, mutator type; transposase, mutator type complement(1980834..1981058) Nitrosomonas sp. Is79A3 10933950 YP_004695056.1 CDS Nit79A3_1854 NC_015731.1 1981196 1981702 D PFAM: Protein of unknown function DUF1917; KEGG: nit:NAL212_0075 hypothetical protein; hypothetical protein 1981196..1981702 Nitrosomonas sp. Is79A3 10933951 YP_004695057.1 CDS Nit79A3_1855 NC_015731.1 1981727 1982017 D KEGG: nit:NAL212_0074 DNA methylase; DNA methylase 1981727..1982017 Nitrosomonas sp. Is79A3 10933952 YP_004695058.1 CDS Nit79A3_1856 NC_015731.1 1982253 1982504 R KEGG: nit:NAL212_0145 regulatory protein, FmdB family; TIGRFAM: Regulatory protein, FmdB, PFAM: Regulatory protein, FmdB; FmdB family regulatory protein complement(1982253..1982504) Nitrosomonas sp. Is79A3 10933953 YP_004695059.1 CDS Nit79A3_1857 NC_015731.1 1982603 1983400 R PFAM: Carbonic anhydrase; KEGG: nit:NAL212_0146 carbonic anhydrase; carbonic anhydrase complement(1982603..1983400) Nitrosomonas sp. Is79A3 10933954 YP_004695060.1 CDS Nit79A3_1858 NC_015731.1 1983517 1985079 D KEGG: nit:NAL212_0147 sigma54 specific transcriptional regulator, Fis family; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; Fis family transcriptional regulator 1983517..1985079 Nitrosomonas sp. Is79A3 10933955 YP_004695061.1 CDS Nit79A3_1859 NC_015731.1 1985112 1987559 D KEGG: reu:Reut_A1185 ATPase, E1-E2 type; TIGRFAM: ATPase, P-type, plasma-membrane proton-efflux; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; plasma-membrane proton-efflux P-type ATPase 1985112..1987559 Nitrosomonas sp. Is79A3 10933956 YP_004695062.1 CDS Nit79A3_1860 NC_015731.1 1987870 1988922 D PFAM: Di-haem cytochrome c peroxidase; KEGG: net:Neut_1521 cytochrome-c peroxidase; Di-heme cytochrome c peroxidase 1987870..1988922 Nitrosomonas sp. Is79A3 10933957 YP_004695063.1 CDS Nit79A3_1861 NC_015731.1 1988971 1989324 D PFAM: Sulphur relay, DsrE-like protein; KEGG: nhl:Nhal_2753 DsrE family protein; DsrE family protein 1988971..1989324 Nitrosomonas sp. Is79A3 10933958 YP_004695064.1 CDS Nit79A3_1862 NC_015731.1 1989479 1990729 D PFAM: Ferric reductase-like transmembrane component, N-terminal; Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding; KEGG: app:CAP2UW1_2674 ferric reductase domain-containing protein protein transmembrane component domain-containing protein; ferric reductase 1989479..1990729 Nitrosomonas sp. Is79A3 10933959 YP_004695065.1 CDS Nit79A3_1864 NC_015731.1 1990971 1991957 R TIGRFAM: Phosphate binding protein; KEGG: nit:NAL212_2082 phosphate binding protein; phosphate binding protein complement(1990971..1991957) Nitrosomonas sp. Is79A3 10933961 YP_004695066.1 CDS Nit79A3_1865 NC_015731.1 1992026 1993288 R KEGG: tbd:Tbd_2610 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; integral membrane sensor signal transduction histidine kinase complement(1992026..1993288) Nitrosomonas sp. Is79A3 10933962 YP_004695067.1 CDS Nit79A3_1866 NC_015731.1 1993275 1993958 R KEGG: response regulator, OmpR family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator complement(1993275..1993958) Nitrosomonas sp. Is79A3 10933963 YP_004695068.1 CDS Nit79A3_1867 NC_015731.1 1994404 1995291 D KEGG: nit:NAL212_2282 hypothetical protein; hypothetical protein 1994404..1995291 Nitrosomonas sp. Is79A3 10933964 YP_004695069.1 CDS Nit79A3_1868 NC_015731.1 1995392 1995805 D KEGG: nit:NAL212_0893 hypothetical protein; hypothetical protein 1995392..1995805 Nitrosomonas sp. Is79A3 10933965 YP_004695070.1 CDS Nit79A3_1869 NC_015731.1 1995928 1996512 D KEGG: rpd:RPD_2508 hypothetical protein; hypothetical protein 1995928..1996512 Nitrosomonas sp. Is79A3 10933966 YP_004695071.1 CDS Nit79A3_1871 NC_015731.1 1997129 1997473 R KEGG: nit:NAL212_1820 hypothetical protein; hypothetical protein complement(1997129..1997473) Nitrosomonas sp. Is79A3 10933968 YP_004695072.1 CDS Nit79A3_1872 NC_015731.1 1997600 1998205 R KEGG: neu:NE1752 hypothetical protein; hypothetical protein complement(1997600..1998205) Nitrosomonas sp. Is79A3 10933969 YP_004695073.1 CDS Nit79A3_1873 NC_015731.1 1998512 1999021 D KEGG: neu:NE1179 transmembrane protein; transmembrane protein 1998512..1999021 Nitrosomonas sp. Is79A3 10933970 YP_004695074.1 CDS Nit79A3_1874 NC_015731.1 1999084 1999449 R KEGG: nit:NAL212_1773 hypothetical protein; hypothetical protein complement(1999084..1999449) Nitrosomonas sp. Is79A3 10933971 YP_004695075.1 CDS Nit79A3_1875 NC_015731.1 1999625 2000524 R KEGG: dol:Dole_2710 hypothetical protein; hypothetical protein complement(1999625..2000524) Nitrosomonas sp. Is79A3 10933972 YP_004695076.1 CDS Nit79A3_1876 NC_015731.1 2000720 2001835 D PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein 2000720..2001835 Nitrosomonas sp. Is79A3 10933973 YP_004695077.1 CDS Nit79A3_1880 NC_015731.1 2004977 2006206 R KEGG: nit:NAL212_1513 aspartate kinase; TIGRFAM: Aspartate kinase region; Aspartate kinase, monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; aspartate kinase complement(2004977..2006206) Nitrosomonas sp. Is79A3 10933978 YP_004695078.1 CDS Nit79A3_1881 NC_015731.1 2006607 2007392 R PFAM: Class II aldolase/adducin, N-terminal; KEGG: nit:NAL212_0867 class II aldolase/adducin family protein; class II aldolase/adducin family protein complement(2006607..2007392) Nitrosomonas sp. Is79A3 10933979 YP_004695079.1 CDS Nit79A3_1882 NC_015731.1 2007453 2007857 R KEGG: nit:NAL212_0866 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4; RNA-binding S4 domain-containing protein complement(2007453..2007857) Nitrosomonas sp. Is79A3 10933980 YP_004695080.1 CDS Nit79A3_1883 NC_015731.1 2007865 2009097 R PFAM: Peroxiredoxin, OsmC-like protein; KEGG: nit:NAL212_0865 OsmC family protein; OsmC family protein complement(2007865..2009097) Nitrosomonas sp. Is79A3 10933981 YP_004695081.1 CDS Nit79A3_1884 NC_015731.1 2009331 2010197 R KEGG: nit:NAL212_0864 hypothetical protein; hypothetical protein complement(2009331..2010197) Nitrosomonas sp. Is79A3 10933982 YP_004695082.1 CDS Nit79A3_1885 NC_015731.1 2010387 2011319 D PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; KEGG: slt:Slit_2280 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein 2010387..2011319 Nitrosomonas sp. Is79A3 10933983 YP_004695083.1 CDS Nit79A3_1886 NC_015731.1 2011604 2012524 D KEGG: nit:NAL212_0855 branched-chain amino acid aminotransferase; TIGRFAM: Branched-chain amino acid aminotransferase I; PFAM: Aminotransferase, class IV; branched-chain amino acid aminotransferase 2011604..2012524 Nitrosomonas sp. Is79A3 10933984 YP_004695084.1 CDS Nit79A3_1887 NC_015731.1 2012550 2012753 D KEGG: nit:NAL212_0854 hypothetical protein; hypothetical protein 2012550..2012753 Nitrosomonas sp. Is79A3 10933985 YP_004695085.1 CDS Nit79A3_1888 NC_015731.1 2012867 2014243 D PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; KEGG: nit:NAL212_0853 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II 2012867..2014243 Nitrosomonas sp. Is79A3 10933986 YP_004695086.1 CDS Nit79A3_1889 NC_015731.1 2014433 2016061 D KEGG: nit:NAL212_0852 NAD+ synthetase; TIGRFAM: NAD+ synthase; PFAM: NAD+ synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthetase 2014433..2016061 Nitrosomonas sp. Is79A3 10933987 YP_004695087.1 CDS Nit79A3_1890 NC_015731.1 2016106 2017617 D PFAM: Peptidase M48, Ste24p; KEGG: nit:NAL212_0851 peptidase M48 Ste24p; peptidase M48 Ste24p 2016106..2017617 Nitrosomonas sp. Is79A3 10933988 YP_004695088.1 CDS Nit79A3_1891 NC_015731.1 2017722 2018870 D KEGG: nit:NAL212_0850 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 2017722..2018870 Nitrosomonas sp. Is79A3 10933989 YP_004695089.1 CDS Nit79A3_1892 NC_015731.1 2018870 2019628 D KEGG: nit:NAL212_0849 phosphonate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 2018870..2019628 Nitrosomonas sp. Is79A3 10933990 YP_004695090.1 CDS Nit79A3_1893 NC_015731.1 2019692 2020915 D PFAM: Protein of unknown function DUF214, permase predicted; KEGG: nit:NAL212_0848 hypothetical protein; hypothetical protein 2019692..2020915 Nitrosomonas sp. Is79A3 10933991 YP_004695091.1 CDS Nit79A3_1894 NC_015731.1 2020971 2021582 D PFAM: Exopolysaccharide synthesis, ExoD; KEGG: nit:NAL212_0212 exopolysaccharide synthesis ExoD; Exopolysaccharide synthesis ExoD 2020971..2021582 Nitrosomonas sp. Is79A3 10933992 YP_004695092.1 CDS Nit79A3_1895 NC_015731.1 2021675 2024560 D KEGG: nit:NAL212_1945 signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; signal transduction histidine kinase 2021675..2024560 Nitrosomonas sp. Is79A3 10933993 YP_004695093.1 CDS Nit79A3_1896 NC_015731.1 2024562 2025215 D KEGG: nit:NAL212_1946 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 2024562..2025215 Nitrosomonas sp. Is79A3 10933994 YP_004695094.1 CDS Nit79A3_1897 NC_015731.1 2025336 2025848 D KEGG: nit:NAL212_1947 hypothetical protein; hypothetical protein 2025336..2025848 Nitrosomonas sp. Is79A3 10933995 YP_004695095.1 CDS Nit79A3_1898 NC_015731.1 2026064 2027413 D PFAM: Protein of unknown function DUF1597; KEGG: nit:NAL212_1948 hypothetical protein; hypothetical protein 2026064..2027413 Nitrosomonas sp. Is79A3 10933996 YP_004695096.1 CDS Nit79A3_1899 NC_015731.1 2027495 2027917 R KEGG: nit:NAL212_1949 hypothetical protein; hypothetical protein complement(2027495..2027917) Nitrosomonas sp. Is79A3 10933997 YP_004695097.1 CDS Nit79A3_1900 NC_015731.1 2028209 2029522 D PFAM: Protein of unknown function DUF1597; KEGG: nit:NAL212_1950 hypothetical protein; hypothetical protein 2028209..2029522 Nitrosomonas sp. Is79A3 10933998 YP_004695098.1 CDS Nit79A3_1901 NC_015731.1 2029558 2031012 R KEGG: nit:NAL212_1586 ribonuclease, Rne/Rng family; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain; ribonuclease, Rne/Rng family complement(2029558..2031012) Nitrosomonas sp. Is79A3 10933999 YP_004695099.1 CDS Nit79A3_1902 NC_015731.1 2031148 2031768 R TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: nit:NAL212_1585 maf protein; PFAM: Maf-like protein; Septum formation protein Maf complement(2031148..2031768) Nitrosomonas sp. Is79A3 10934000 YP_004695100.1 CDS Nit79A3_1903 NC_015731.1 2031868 2032338 R PFAM: SPOUT methyltransferase, predicted; manually curated; TIGRFAM: Conserved hypothetical protein CHP00246; KEGG: nit:NAL212_1584 SPOUT methyltransferase; HAMAP: Ribosomal RNA large subunit methyltransferase H; Ribosomal RNA large subunit methyltransferase H complement(2031868..2032338) Nitrosomonas sp. Is79A3 10934001 YP_004695101.1 CDS Nit79A3_1904 NC_015731.1 2032396 2032722 R KEGG: nit:NAL212_1583 iojap-like protein; TIGRFAM: Iojap-related protein; PFAM: Iojap-related protein; iojap-like protein complement(2032396..2032722) Nitrosomonas sp. Is79A3 10934002 YP_004695102.1 CDS Nit79A3_1905 NC_015731.1 2032719 2033396 R TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; HAMAP: nicotinate-nucleotide adenylyltransferase; KEGG: nit:NAL212_1582 nicotinate-nucleotide adenylyltransferase; PFAM: Cytidylyltransferase; nicotinate-nucleotide adenylyltransferase complement(2032719..2033396) Nitrosomonas sp. Is79A3 10934003 YP_004695103.1 CDS Nit79A3_1906 NC_015731.1 2033430 2034740 R PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; KEGG: nit:NAL212_1581 dihydrolipoyllysine-residue acetyltransferase; hypothetical protein complement(2033430..2034740) Nitrosomonas sp. Is79A3 10934004 YP_004695104.1 CDS Nit79A3_1907 NC_015731.1 2034835 2037495 R KEGG: nit:NAL212_1580 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; PFAM: Transketolase, N-terminal; 2-oxo-acid dehydrogenase E1 complement(2034835..2037495) Nitrosomonas sp. Is79A3 10934005 YP_004695105.1 CDS Nit79A3_1908 NC_015731.1 2037527 2038393 R KEGG: nit:NAL212_1579 methylenetetrahydrofolate dehydrogenase (NADP(+)); HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; Bifunctional protein folD complement(2037527..2038393) Nitrosomonas sp. Is79A3 10934006 YP_004695106.1 CDS Nit79A3_1909 NC_015731.1 2038482 2039171 R KEGG: nit:NAL212_1578 hypothetical protein; hypothetical protein complement(2038482..2039171) Nitrosomonas sp. Is79A3 10934007 YP_004695107.1 CDS Nit79A3_1910 NC_015731.1 2039317 2040177 R KEGG: nit:NAL212_1577 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase complement(2039317..2040177) Nitrosomonas sp. Is79A3 10934008 YP_004695108.1 CDS Nit79A3_1911 NC_015731.1 2040325 2041758 R TIGRFAM: S-adenosyl-L-homocysteine hydrolase; HAMAP: Adenosylhomocysteinase; KEGG: nit:NAL212_1576 adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding; adenosylhomocysteinase complement(2040325..2041758) Nitrosomonas sp. Is79A3 10934009 YP_004695109.1 CDS Nit79A3_1912 NC_015731.1 2041903 2043066 R TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; KEGG: nit:NAL212_1575 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthase complement(2041903..2043066) Nitrosomonas sp. Is79A3 10934010 YP_004695110.1 CDS Nit79A3_1913 NC_015731.1 2043184 2044641 R KEGG: pbr:PB2503_07429 hypothetical protein; hypothetical protein complement(2043184..2044641) Nitrosomonas sp. Is79A3 10934011 YP_004695111.1 CDS Nit79A3_1914 NC_015731.1 2044642 2045706 R PFAM: Alpha/beta hydrolase fold-1; KEGG: pbr:PB2503_07499 hydrolase; alpha/beta hydrolase complement(2044642..2045706) Nitrosomonas sp. Is79A3 10934012 YP_004695112.1 CDS Nit79A3_1915 NC_015731.1 2045712 2047310 R PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; KEGG: gvi:gll4223 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase complement(2045712..2047310) Nitrosomonas sp. Is79A3 10934013 YP_004695113.1 CDS Nit79A3_1916 NC_015731.1 2047325 2047618 R KEGG: gvi:gsl4224 acyl carrier protein; acyl carrier protein complement(2047325..2047618) Nitrosomonas sp. Is79A3 10934014 YP_004695114.1 CDS Nit79A3_1917 NC_015731.1 2047643 2052397 R PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; 4'-phosphopantetheinyl transferase; KEGG: gvi:gll4225 glycolipid synthase; beta-ketoacyl synthase complement(2047643..2052397) Nitrosomonas sp. Is79A3 10934015 YP_004695115.1 CDS Nit79A3_1918 NC_015731.1 2052397 2060673 R TIGRFAM: Polyketide-type polyunsaturated fatty acid synthase, PfaA; KEGG: pbr:PB2503_07474 modular polyketide synthase; PFAM: Beta-ketoacyl synthase, N-terminal; 2-nitropropane dioxygenase, NPD; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding; Polyketide synthase, KR; polyketide-type polyunsaturated fatty acid synthase PfaA complement(2052397..2060673) Nitrosomonas sp. Is79A3 10934016 YP_004695116.1 CDS Nit79A3_1919 NC_015731.1 2061376 2061816 R KEGG: eba:ebA563 transposition helper protein; manually curated; PFAM: Transposase IS200-like; transposase IS200-family protein complement(2061376..2061816) Nitrosomonas sp. Is79A3 10934017 YP_004695117.1 CDS Nit79A3_1920 NC_015731.1 2062264 2063130 R PFAM: Phospholipase/carboxylesterase; KEGG: dsh:Dshi_0713 poly(3-hydroxybutyrate) depolymerase-like protein; phospholipase/Carboxylesterase complement(2062264..2063130) Nitrosomonas sp. Is79A3 10934018 YP_004695118.1 CDS Nit79A3_1921 NC_015731.1 2063477 2064124 R TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; KEGG: nit:NAL212_2318 PEP motif anchor domain-containing protein; PEP motif anchor domain-containing protein complement(2063477..2064124) Nitrosomonas sp. Is79A3 10934019 YP_004695119.1 CDS Nit79A3_1922 NC_015731.1 2064480 2065787 D KEGG: nfa:nfa33950 hypothetical protein; hypothetical protein 2064480..2065787 Nitrosomonas sp. Is79A3 10934020 YP_004695120.1 CDS Nit79A3_1923 NC_015731.1 2066087 2067346 D KEGG: gvi:glr4232 hypothetical protein; hypothetical protein 2066087..2067346 Nitrosomonas sp. Is79A3 10934021 YP_004695121.1 CDS Nit79A3_1924 NC_015731.1 2067633 2068232 R PFAM: CDP-alcohol phosphatidyltransferase; KEGG: nit:NAL212_2512 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase complement(2067633..2068232) Nitrosomonas sp. Is79A3 10934022 YP_004695122.1 CDS Nit79A3_1925 NC_015731.1 2068669 2069424 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: nit:NAL212_2514 endonuclease/exonuclease/phosphatase; hypothetical protein 2068669..2069424 Nitrosomonas sp. Is79A3 10934023 YP_004695123.1 CDS Nit79A3_1926 NC_015731.1 2069473 2071884 R TIGRFAM: Peptidase S16, ATP-dependent protease La; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core; KEGG: nit:NAL212_2515 anti-sigma H sporulation factor, LonB; SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; anti-sigma H sporulation factor, LonB complement(2069473..2071884) Nitrosomonas sp. Is79A3 10934024 YP_004695124.1 CDS Nit79A3_1927 NC_015731.1 2072037 2073314 R SMART: ATPase, AAA+ type, core; TIGRFAM: Clp protease, ATP-binding subunit ClpX; KEGG: nit:NAL212_2516 ATP-dependent Clp protease, ATP-binding subunit ClpX; HAMAP: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase associated with various cellular activities, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; ATP-dependent Clp protease ATP-binding subunit ClpX complement(2072037..2073314) Nitrosomonas sp. Is79A3 10934025 YP_004695125.1 CDS Nit79A3_1928 NC_015731.1 2073381 2074022 R TIGRFAM: Peptidase S14, ClpP; HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: nit:NAL212_2517 ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: Peptidase S14, ClpP; ATP-dependent Clp protease proteolytic subunit complement(2073381..2074022) Nitrosomonas sp. Is79A3 10934026 YP_004695126.1 CDS Nit79A3_1929 NC_015731.1 2074024 2075328 R TIGRFAM: Trigger factor; HAMAP: Trigger factor; KEGG: nit:NAL212_2518 trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type; Trigger factor, C-terminal, bacterial; Trigger factor complement(2074024..2075328) Nitrosomonas sp. Is79A3 10934027 YP_004695127.1 CDS Nit79A3_1930 NC_015731.1 2075592 2076338 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nit:NAL212_2519 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2075592..2076338) Nitrosomonas sp. Is79A3 10934029 YP_004695128.1 CDS Nit79A3_1931 NC_015731.1 2076500 2078152 R TIGRFAM: Chaperonin Cpn60; HAMAP: 60 kDa chaperonin; KEGG: nit:NAL212_2520 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; molecular chaperone GroEL complement(2076500..2078152) Nitrosomonas sp. Is79A3 10934030 YP_004695129.1 CDS Nit79A3_1932 NC_015731.1 2078210 2078500 R KEGG: nit:NAL212_2521 chaperonin Cpn10; HAMAP: Chaperonin Cpn10, subgroup; PFAM: Chaperonin Cpn10; molecular chaperone GroES complement(2078210..2078500) Nitrosomonas sp. Is79A3 10934031 YP_004695130.1 CDS Nit79A3_1933 NC_015731.1 2078878 2080044 R PFAM: Transposase, IS4-like; KEGG: dar:Daro_2223 transposase IS4; transposase IS4 family protein complement(2078878..2080044) Nitrosomonas sp. Is79A3 10934032 YP_004695131.1 CDS Nit79A3_1934 NC_015731.1 2080636 2082030 R TIGRFAM: PAS; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor region; PAS fold; ATP-binding region, ATPase-like; KEGG: nit:NAL212_1749 signal transduction histidine kinase; SMART: PAS; PAC motif; ATP-binding region, ATPase-like; signal transduction histidine kinase complement(2080636..2082030) Nitrosomonas sp. Is79A3 10934033 YP_004695132.1 CDS Nit79A3_1935 NC_015731.1 2082074 2084515 R TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: nit:NAL212_1748 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) complement(2082074..2084515) Nitrosomonas sp. Is79A3 10934034 YP_004695133.1 CDS Nit79A3_1936 NC_015731.1 2084936 2085970 R KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase complement(2084936..2085970) Nitrosomonas sp. Is79A3 10934035 YP_004695134.1 CDS Nit79A3_1937 NC_015731.1 2086549 2087292 R PFAM: TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C; KEGG: nit:NAL212_1610 TenA/THI-4 domain-containing protein; TENA/THI-4 domain-containing protein complement(2086549..2087292) Nitrosomonas sp. Is79A3 10934036 YP_004695135.1 CDS Nit79A3_1938 NC_015731.1 2087369 2089663 R TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; HAMAP: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; KEGG: nit:NAL212_1609 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase complement(2087369..2089663) Nitrosomonas sp. Is79A3 10934037 YP_004695136.1 CDS Nit79A3_1939 NC_015731.1 2089769 2090668 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nit:NAL212_1608 transcriptional regulator, LysR family; LysR family transcriptional regulator 2089769..2090668 Nitrosomonas sp. Is79A3 10934038 YP_004695137.1 CDS Nit79A3_1940 NC_015731.1 2090683 2092638 R KEGG: mts:MTES_0753 hypothetical protein; hypothetical protein complement(2090683..2092638) Nitrosomonas sp. Is79A3 10934039 YP_004695138.1 CDS Nit79A3_1941 NC_015731.1 2093260 2093679 D KEGG: nit:NAL212_1035 hypothetical protein; hypothetical protein 2093260..2093679 Nitrosomonas sp. Is79A3 10934040 YP_004695139.1 CDS Nit79A3_1942 NC_015731.1 2093746 2094054 R KEGG: nit:NAL212_1034 glutaredoxin-like protein; TIGRFAM: Glutaredoxin-related protein; PFAM: Glutaredoxin; glutaredoxin-like protein complement(2093746..2094054) Nitrosomonas sp. Is79A3 10934041 YP_004695140.1 CDS Nit79A3_1943 NC_015731.1 2094140 2094976 R KEGG: nit:NAL212_1033 protein-(glutamine-N5) methyltransferase, release factor-specific; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; PFAM: Methyltransferase small; protein-(glutamine-N5) methyltransferase, release factor-specific complement(2094140..2094976) Nitrosomonas sp. Is79A3 10934042 YP_004695141.1 CDS Nit79A3_1944 NC_015731.1 2094999 2096078 R TIGRFAM: Peptide chain release factor 1; HAMAP: Peptide chain release factor 1; KEGG: nit:NAL212_1032 peptide chain release factor 1; PFAM: Class I peptide chain release factor; Peptide chain release factor; peptide chain release factor 1 complement(2094999..2096078) Nitrosomonas sp. Is79A3 10934043 YP_004695142.1 CDS Nit79A3_1945 NC_015731.1 2096075 2097328 R TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; KEGG: nit:NAL212_1031 glutamyl-tRNA reductase; PFAM: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal; Glutamyl-tRNA reductase complement(2096075..2097328) Nitrosomonas sp. Is79A3 10934044 YP_004695143.1 CDS Nit79A3_1946 NC_015731.1 2097458 2097958 R PFAM: CreA; KEGG: nit:NAL212_1030 CreA family protein; CreA family protein complement(2097458..2097958) Nitrosomonas sp. Is79A3 10934045 YP_004695144.1 CDS Nit79A3_1947 NC_015731.1 2098432 2099211 R PFAM: Carbonic anhydrase; KEGG: nit:NAL212_0011 carbonic anhydrase; carbonic anhydrase complement(2098432..2099211) Nitrosomonas sp. Is79A3 10934047 YP_004695145.1 CDS Nit79A3_1948 NC_015731.1 2099549 2099992 D KEGG: nit:NAL212_1029 hypothetical protein; hypothetical protein 2099549..2099992 Nitrosomonas sp. Is79A3 10934048 YP_004695146.1 CDS Nit79A3_1949 NC_015731.1 2100069 2101529 R KEGG: nit:NAL212_1028 dihydrolipoamide dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoamide dehydrogenase complement(2100069..2101529) Nitrosomonas sp. Is79A3 10934049 YP_004695147.1 CDS Nit79A3_1950 NC_015731.1 2101629 2102681 R PFAM: Glycoside hydrolase, family 3, N-terminal; KEGG: nit:NAL212_1027 glycoside hydrolase 3 domain-containing protein; glycoside hydrolase 3 domain-containing protein complement(2101629..2102681) Nitrosomonas sp. Is79A3 10934050 YP_004695148.1 CDS Nit79A3_1951 NC_015731.1 2102684 2103061 R TIGRFAM: Phosphopantethiene-protein transferase; Holo-[acyl carrier protein] synthase; HAMAP: Holo-[acyl-carrier-protein] synthase; KEGG: nit:NAL212_1026 holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; holo-ACP synthase complement(2102684..2103061) Nitrosomonas sp. Is79A3 10934051 YP_004695149.1 CDS Nit79A3_1952 NC_015731.1 2103058 2103783 R TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; KEGG: nit:NAL212_1025 pyridoxal phosphate biosynthetic protein PdxJ; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; Pyridoxine 5'-phosphate synthase complement(2103058..2103783) Nitrosomonas sp. Is79A3 10934052 YP_004695150.1 CDS Nit79A3_1953 NC_015731.1 2103832 2104725 R TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; HAMAP: GTP-binding protein Era; KEGG: nit:NAL212_1024 GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; GTP-binding protein Era complement(2103832..2104725) Nitrosomonas sp. Is79A3 10934053 YP_004695151.1 CDS Nit79A3_1954 NC_015731.1 2104764 2105480 R SMART: Ribonuclease III; Double-stranded RNA binding; TIGRFAM: Ribonuclease III, bacterial; KEGG: nit:NAL212_1023 ribonuclease III; HAMAP: Ribonuclease III, bacterial; PFAM: Ribonuclease III; Double-stranded RNA binding; Ribonuclease 3 complement(2104764..2105480) Nitrosomonas sp. Is79A3 10934054 YP_004695152.1 CDS Nit79A3_1955 NC_015731.1 2105495 2105866 R KEGG: nit:NAL212_1022 transmembrane protein; transmembrane protein complement(2105495..2105866) Nitrosomonas sp. Is79A3 10934055 YP_004695153.1 CDS Nit79A3_1956 NC_015731.1 2105901 2106704 R KEGG: nit:NAL212_1021 signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I complement(2105901..2106704) Nitrosomonas sp. Is79A3 10934056 YP_004695154.1 CDS Nit79A3_1957 NC_015731.1 2106701 2106796 R hypothetical protein complement(2106701..2106796) Nitrosomonas sp. Is79A3 10934057 YP_004695155.1 CDS Nit79A3_1958 NC_015731.1 2106796 2108589 R TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; HAMAP: GTP-binding protein lepA; KEGG: nit:NAL212_1020 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; GTP-binding protein LepA complement(2106796..2108589) Nitrosomonas sp. Is79A3 10934058 YP_004695156.1 CDS Nit79A3_1959 NC_015731.1 2108691 2108981 R PFAM: Glutaredoxin 2; KEGG: nit:NAL212_1019 glutaredoxin 2; glutaredoxin 2 complement(2108691..2108981) Nitrosomonas sp. Is79A3 10934059 YP_004695157.1 CDS Nit79A3_1960 NC_015731.1 2108965 2110380 R TIGRFAM: Peptidase S1C, Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; KEGG: nit:NAL212_1018 protease Do; SMART: PDZ/DHR/GLGF; protease Do complement(2108965..2110380) Nitrosomonas sp. Is79A3 10934060 YP_004695158.1 CDS Nit79A3_1961 NC_015731.1 2110622 2111626 R PFAM: MucB/RseB; KEGG: nit:NAL212_1017 sigma E regulatory protein, MucB/RseB; sigma E regulatory protein, MucB/RseB complement(2110622..2111626) Nitrosomonas sp. Is79A3 10934061 YP_004695159.1 CDS Nit79A3_1962 NC_015731.1 2111623 2112171 R PFAM: Anti sigma-E protein RseA, N-terminal; KEGG: nit:NAL212_1016 anti sigma-E protein, RseA; Anti sigma-E protein RseA family protein complement(2111623..2112171) Nitrosomonas sp. Is79A3 10934062 YP_004695160.1 CDS Nit79A3_1963 NC_015731.1 2112173 2112772 R KEGG: nit:NAL212_1015 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70 RpoE type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(2112173..2112772) Nitrosomonas sp. Is79A3 10934063 YP_004695161.1 CDS Nit79A3_1964 NC_015731.1 2113049 2114647 D KEGG: nit:NAL212_1014 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; L-aspartate oxidase 2113049..2114647 Nitrosomonas sp. Is79A3 10934064 YP_004695162.1 CDS Nit79A3_1965 NC_015731.1 2114819 2115331 D PFAM: MEKHLA; KEGG: nit:NAL212_1013 MEKHLA domain-containing protein; MEKHLA domain-containing protein 2114819..2115331 Nitrosomonas sp. Is79A3 10934065 YP_004695163.1 CDS Nit79A3_1966 NC_015731.1 2116316 2116537 D hypothetical protein 2116316..2116537 Nitrosomonas sp. Is79A3 10934067 YP_004695164.1 CDS Nit79A3_1967 NC_015731.1 2116534 2116920 D KEGG: gme:Gmet_1436 hypothetical protein; hypothetical protein 2116534..2116920 Nitrosomonas sp. Is79A3 10934068 YP_004695165.1 CDS Nit79A3_1969 NC_015731.1 2118275 2118433 R hypothetical protein complement(2118275..2118433) Nitrosomonas sp. Is79A3 10934070 YP_004695166.1 CDS Nit79A3_1970 NC_015731.1 2118948 2120735 D TIGRFAM: ATPase, K+ transporting, A subunit; HAMAP: ATPase, K+ transporting, A subunit; KEGG: dar:Daro_1087 potassium-transporting ATPase subunit A; PFAM: ATPase, K+ transporting, A subunit; Potassium-transporting ATPase A chain 2118948..2120735 Nitrosomonas sp. Is79A3 10934071 YP_004695167.1 CDS Nit79A3_1971 NC_015731.1 2120751 2122814 D TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; HAMAP: Potassium-transporting ATPase, B chain; KEGG: lhk:LHK_01573 K+transporting ATPase, B subunit; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; potassium-transporting ATPase subunit B 2120751..2122814 Nitrosomonas sp. Is79A3 10934072 YP_004695168.1 CDS Nit79A3_1972 NC_015731.1 2122834 2123409 D TIGRFAM: Potassium transporting ATPase, C subunit; HAMAP: Potassium transporting ATPase, C subunit; KEGG: dar:Daro_1085 potassium-transporting ATPase subunit C; PFAM: Potassium transporting ATPase, C subunit; potassium-transporting ATPase subunit C 2122834..2123409 Nitrosomonas sp. Is79A3 10934073 YP_004695169.1 CDS Nit79A3_1973 NC_015731.1 2123409 2126078 D KEGG: bph:Bphy_2054 osmosensitive K+ channel signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal; UspA; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; osmosensitive K+ channel signal transduction histidine kinase 2123409..2126078 Nitrosomonas sp. Is79A3 10934074 YP_004695170.1 CDS Nit79A3_1974 NC_015731.1 2126075 2126758 D KEGG: bgl:bglu_1g26240 two component transcriptional regulator, winged helix family protein; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator 2126075..2126758 Nitrosomonas sp. Is79A3 10934075 YP_004695171.1 CDS Nit79A3_1975 NC_015731.1 2126946 2128607 D KEGG: dar:Daro_1624 hypothetical protein; hypothetical protein 2126946..2128607 Nitrosomonas sp. Is79A3 10934076 YP_004695172.1 CDS Nit79A3_1976 NC_015731.1 2128650 2129195 R hypothetical protein complement(2128650..2129195) Nitrosomonas sp. Is79A3 10934077 YP_004695173.1 CDS Nit79A3_1978 NC_015731.1 2131086 2131232 R KEGG: dar:Daro_2699 hypothetical protein; hypothetical protein complement(2131086..2131232) Nitrosomonas sp. Is79A3 10934079 YP_004695174.1 CDS Nit79A3_1979 NC_015731.1 2132311 2133567 R PFAM: Integrase, catalytic core, phage; KEGG: dar:Daro_1675 phage integrase; integrase complement(2132311..2133567) Nitrosomonas sp. Is79A3 10934080 YP_004695175.1 CDS Nit79A3_1980 NC_015731.1 2133801 2134247 R KEGG: llo:LLO_1648 hypothetical protein; hypothetical protein complement(2133801..2134247) Nitrosomonas sp. Is79A3 10934081 YP_004695176.1 CDS Nit79A3_1981 NC_015731.1 2134464 2135288 R KEGG: nit:NAL212_1329 hypothetical protein; hypothetical protein complement(2134464..2135288) Nitrosomonas sp. Is79A3 10934082 YP_004695177.1 CDS Nit79A3_1983 NC_015731.1 2135807 2136745 R hypothetical protein complement(2135807..2136745) Nitrosomonas sp. Is79A3 10934084 YP_004695178.1 CDS Nit79A3_1984 NC_015731.1 2136888 2137787 R TIGRFAM: SAICAR synthetase; HAMAP: Phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: nit:NAL212_1554 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; Phosphoribosylaminoimidazole-succinocarboxamide synthase complement(2136888..2137787) Nitrosomonas sp. Is79A3 10934085 YP_004695179.1 CDS Nit79A3_1985 NC_015731.1 2137792 2138931 R KEGG: nit:NAL212_1553 phosphoribosylaminoimidazole carboxylase, ATPase subunit; TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; phosphoribosylaminoimidazole carboxylase, ATPase subunit complement(2137792..2138931) Nitrosomonas sp. Is79A3 10934086 YP_004695180.1 CDS Nit79A3_1986 NC_015731.1 2138931 2139419 R KEGG: nit:NAL212_1552 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase, catalytic subunit complement(2138931..2139419) Nitrosomonas sp. Is79A3 10934087 YP_004695181.1 CDS Nit79A3_1987 NC_015731.1 2139665 2140096 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: nit:NAL212_1551 biopolymer transport protein ExbD/TolR; Biopolymer transport protein ExbD/TolR 2139665..2140096 Nitrosomonas sp. Is79A3 10934088 YP_004695182.1 CDS Nit79A3_1988 NC_015731.1 2140172 2140813 D PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; KEGG: nit:NAL212_1550 superoxide dismutase; Manganese/iron superoxide dismutase 2140172..2140813 Nitrosomonas sp. Is79A3 10934089 YP_004695183.1 CDS Nit79A3_1989 NC_015731.1 2140825 2141469 D TIGRFAM: ATP phosphoribosyltransferase, catalytic region; HAMAP: ATP phosphoribosyltransferase; KEGG: nit:NAL212_1549 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase, catalytic region; ATP phosphoribosyltransferase 2140825..2141469 Nitrosomonas sp. Is79A3 10934090 YP_004695184.1 CDS Nit79A3_1990 NC_015731.1 2141511 2142815 D TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; HAMAP: Histidinol dehydrogenase, prokaryotic-type; KEGG: nit:NAL212_1548 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase, prokaryotic-type; Histidinol dehydrogenase 2141511..2142815 Nitrosomonas sp. Is79A3 10934091 YP_004695185.1 CDS Nit79A3_1991 NC_015731.1 2142865 2143689 D PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: nit:NAL212_1547 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 2142865..2143689 Nitrosomonas sp. Is79A3 10934092 YP_004695186.1 CDS Nit79A3_1992 NC_015731.1 2143741 2144088 D KEGG: nit:NAL212_1546 hypothetical protein; hypothetical protein 2143741..2144088 Nitrosomonas sp. Is79A3 10934093 YP_004695187.1 CDS Nit79A3_1993 NC_015731.1 2144095 2146158 R SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; TIGRFAM: Excinuclease ABC, B subunit; KEGG: nit:NAL212_1545 UvrABC system protein B; HAMAP: Excinuclease ABC, B subunit; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein; UvrABC system protein B complement(2144095..2146158) Nitrosomonas sp. Is79A3 10934094 YP_004695188.1 CDS Nit79A3_1994 NC_015731.1 2146205 2147398 D PFAM: Aminotransferase, class I/II; KEGG: nit:NAL212_1544 aspartate transaminase; class I and II aminotransferase 2146205..2147398 Nitrosomonas sp. Is79A3 10934095 YP_004695189.1 CDS Nit79A3_1995 NC_015731.1 2147433 2147969 R PFAM: Flagellar transcriptional activator FlhC; KEGG: nit:NAL212_1543 flagellar transcriptional activator FlhC; flagellar transcriptional activator FlhC complement(2147433..2147969) Nitrosomonas sp. Is79A3 10934096 YP_004695190.1 CDS Nit79A3_1997 NC_015731.1 2148517 2150229 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: net:Neut_2285 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; diguanylate cyclase/phosphodiesterase complement(2148517..2150229) Nitrosomonas sp. Is79A3 10934098 YP_004695191.1 CDS Nit79A3_1998 NC_015731.1 2150716 2151804 R KEGG: meh:M301_2344 integrase; manually curated; PFAM: Integrase, catalytic core, phage; integrase complement(2150716..2151804) Nitrosomonas sp. Is79A3 10934100 YP_004695192.1 CDS Nit79A3_2000 NC_015731.1 2152019 2153401 R KEGG: nit:NAL212_0325 replication initiation factor; replication initiation factor complement(2152019..2153401) Nitrosomonas sp. Is79A3 10934102 YP_004695193.1 CDS Nit79A3_2001 NC_015731.1 2153507 2154343 R KEGG: dar:Daro_1040 hypothetical protein; hypothetical protein complement(2153507..2154343) Nitrosomonas sp. Is79A3 10934103 YP_004695194.1 CDS Nit79A3_2002 NC_015731.1 2154600 2157611 D KEGG: dak:DaAHT2_2022 hypothetical protein; hypothetical protein 2154600..2157611 Nitrosomonas sp. Is79A3 10934104 YP_004695195.1 CDS Nit79A3_2003 NC_015731.1 2157710 2158672 R PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein complement(2157710..2158672) Nitrosomonas sp. Is79A3 10934105 YP_004695196.1 CDS Nit79A3_2004 NC_015731.1 2158675 2159562 D KEGG: plt:Plut_1823 hypothetical protein; hypothetical protein 2158675..2159562 Nitrosomonas sp. Is79A3 10934106 YP_004695197.1 CDS Nit79A3_2005 NC_015731.1 2159584 2160144 D hypothetical protein 2159584..2160144 Nitrosomonas sp. Is79A3 10934107 YP_004695198.1 CDS Nit79A3_2006 NC_015731.1 2160334 2162532 R hypothetical protein complement(2160334..2162532) Nitrosomonas sp. Is79A3 10934108 YP_004695199.1 CDS Nit79A3_2007 NC_015731.1 2162547 2162762 R manually curated; hypothetical protein complement(2162547..2162762) Nitrosomonas sp. Is79A3 10934109 YP_004695200.1 CDS Nit79A3_2008 NC_015731.1 2163473 2163799 R TIGRFAM: Addiction module antidote protein, HI1420; KEGG: dpr:Despr_0176 addiction module antidote protein; addiction module antidote protein complement(2163473..2163799) Nitrosomonas sp. Is79A3 10934110 YP_004695201.1 CDS Nit79A3_2009 NC_015731.1 2163792 2164130 R KEGG: nit:NAL212_0344 addiction module killer protein; TIGRFAM: Addiction module killer protein, HI1419; PFAM: Protein of unknown function DUF891; addiction module killer protein complement(2163792..2164130) Nitrosomonas sp. Is79A3 10934111 YP_004695202.1 CDS Nit79A3_2012 NC_015731.1 2165265 2166044 R SMART: Ribosomal RNA adenine methylase transferase, N-terminal; TIGRFAM: Ribosomal RNA adenine dimethylase; KEGG: nit:NAL212_0827 dimethyladenosine transferase; HAMAP: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine methylase transferase; Ribosomal RNA small subunit methyltransferase A complement(2165265..2166044) Nitrosomonas sp. Is79A3 10934114 YP_004695203.1 CDS Nit79A3_2013 NC_015731.1 2166034 2167041 R TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; KEGG: nit:NAL212_0826 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase complement(2166034..2167041) Nitrosomonas sp. Is79A3 10934115 YP_004695204.1 CDS Nit79A3_2014 NC_015731.1 2167044 2168366 R KEGG: nit:NAL212_0825 SurA domain; HAMAP: Chaperone surA; PFAM: SurA N-terminal; Peptidyl-prolyl cis-trans isomerase, PpiC-type; Chaperone surA complement(2167044..2168366) Nitrosomonas sp. Is79A3 10934116 YP_004695205.1 CDS Nit79A3_2015 NC_015731.1 2168411 2170645 R KEGG: nit:NAL212_0824 organic solvent tolerance protein; HAMAP: LPS-assembly protein lptD; PFAM: Organic solvent tolerance protein; OstA-like protein; LPS-assembly protein lptD complement(2168411..2170645) Nitrosomonas sp. Is79A3 10934117 YP_004695206.1 CDS Nit79A3_2016 NC_015731.1 2171088 2171549 D KEGG: nit:NAL212_2425 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: ISC system FeS cluster assembly, IscR transcription factor; Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2; BadM/Rrf2 family transcriptional regulator 2171088..2171549 Nitrosomonas sp. Is79A3 10934118 YP_004695207.1 CDS Nit79A3_2017 NC_015731.1 2171751 2172101 D KEGG: nit:NAL212_2424 iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; iron-sulfur cluster assembly accessory protein 2171751..2172101 Nitrosomonas sp. Is79A3 10934119 YP_004695208.1 CDS Nit79A3_2018 NC_015731.1 2172213 2173649 D KEGG: nit:NAL212_2423 FeS assembly protein SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD; FeS assembly protein SufB 2172213..2173649 Nitrosomonas sp. Is79A3 10934120 YP_004695209.1 CDS Nit79A3_2019 NC_015731.1 2173646 2174437 D TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: nit:NAL212_2422 FeS assembly ATPase SufC; SMART: ATPase, AAA+ type, core; FeS assembly ATPase SufC 2173646..2174437 Nitrosomonas sp. Is79A3 10934121 YP_004695210.1 CDS Nit79A3_2020 NC_015731.1 2174434 2175744 D KEGG: nit:NAL212_2421 FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: SUF system FeS cluster assembly, SufBD; FeS assembly protein SufD 2174434..2175744 Nitrosomonas sp. Is79A3 10934122 YP_004695211.1 CDS Nit79A3_2021 NC_015731.1 2175747 2177009 D KEGG: nit:NAL212_2420 cysteine desulfurase, SufS subfamily; TIGRFAM: Cysteine desulfurase, SufS; PFAM: Aminotransferase, class V/Cysteine desulfurase; SufS subfamily cysteine desulfurase 2175747..2177009 Nitrosomonas sp. Is79A3 10934123 YP_004695212.1 CDS Nit79A3_2022 NC_015731.1 2177009 2177491 D KEGG: nit:NAL212_2419 SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS cluster assembly, SufU scaffold; PFAM: NIF system FeS cluster assembly, NifU, N-terminal; SUF system FeS assembly protein, NifU family 2177009..2177491 Nitrosomonas sp. Is79A3 10934124 YP_004695213.1 CDS Nit79A3_2023 NC_015731.1 2177620 2178180 D PFAM: NIF system FeS cluster assembly, NifU-like scaffold, N-terminal; NIF system FeS cluster assembly, NifU, C-terminal; KEGG: nit:NAL212_2418 scaffold protein Nfu/NifU; Scaffold protein Nfu/NifU 2177620..2178180 Nitrosomonas sp. Is79A3 10934125 YP_004695214.1 CDS Nit79A3_2024 NC_015731.1 2178229 2178792 R TIGRFAM: Translation elongation factor P; HAMAP: Translation elongation factor P; KEGG: nit:NAL212_2417 translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor P/YeiP, central; Translation elongation factor, KOW-like; Elongation factor P complement(2178229..2178792) Nitrosomonas sp. Is79A3 10934126 YP_004695215.1 CDS Nit79A3_2025 NC_015731.1 2178871 2180007 R PFAM: Uncharacterised conserved protein UCP015557; KEGG: nit:NAL212_2416 hypothetical protein; hypothetical protein complement(2178871..2180007) Nitrosomonas sp. Is79A3 10934127 YP_004695216.1 CDS Nit79A3_2026 NC_015731.1 2180102 2180884 R KEGG: nit:NAL212_2415 hypothetical protein; hypothetical protein complement(2180102..2180884) Nitrosomonas sp. Is79A3 10934128 YP_004695217.1 CDS Nit79A3_2027 NC_015731.1 2180976 2181422 R PFAM: UspA; KEGG: nmu:Nmul_A0904 hypothetical protein; UspA domain-containing protein complement(2180976..2181422) Nitrosomonas sp. Is79A3 10934129 YP_004695218.1 CDS Nit79A3_2028 NC_015731.1 2181823 2182650 D PFAM: SH3, type 3; KEGG: nit:NAL212_2226 SH3 type 3 domain-containing protein; SH3 type 3 domain-containing protein 2181823..2182650 Nitrosomonas sp. Is79A3 10934130 YP_004695219.1 CDS Nit79A3_2029 NC_015731.1 2182657 2184279 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; HAMP linker domain; KEGG: nit:NAL212_2227 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; HAMP linker domain; diguanylate cyclase complement(2182657..2184279) Nitrosomonas sp. Is79A3 10934131 YP_004695220.1 CDS Nit79A3_2030 NC_015731.1 2184342 2184746 R PFAM: Globin, truncated bacterial-like; KEGG: nit:NAL212_2228 globin; globin complement(2184342..2184746) Nitrosomonas sp. Is79A3 10934132 YP_004695221.1 CDS Nit79A3_2031 NC_015731.1 2184962 2186611 D PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; KEGG: nit:NAL212_2229 malic protein NAD-binding protein; malic protein NAD-binding protein 2184962..2186611 Nitrosomonas sp. Is79A3 10934133 YP_004695222.1 CDS Nit79A3_2032 NC_015731.1 2186644 2187474 R KEGG: nit:NAL212_2230 phosphoserine phosphatase SerB; TIGRFAM: Phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB, PSPase-like; PFAM: Haloacid dehalogenase-like hydrolase; phosphoserine phosphatase SerB complement(2186644..2187474) Nitrosomonas sp. Is79A3 10934134 YP_004695223.1 CDS Nit79A3_2033 NC_015731.1 2187523 2188986 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Metal-dependent hydrolase HDOD; KEGG: nit:NAL212_2231 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase complement(2187523..2188986) Nitrosomonas sp. Is79A3 10934135 YP_004695224.1 CDS Nit79A3_2034 NC_015731.1 2189296 2190792 D KEGG: nit:NAL212_2232 cytosol aminopeptidase; HAMAP: cytosol aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal; cytosol aminopeptidase 2189296..2190792 Nitrosomonas sp. Is79A3 10934136 YP_004695225.1 CDS Nit79A3_2035 NC_015731.1 2190936 2191358 D PFAM: DNA polymerase III chi subunit, HolC; KEGG: nit:NAL212_2233 DNA polymerase III chi subunit HolC; DNA polymerase III chi subunit HolC 2190936..2191358 Nitrosomonas sp. Is79A3 10934137 YP_004695226.1 CDS Nit79A3_2036 NC_015731.1 2191379 2191738 D KEGG: nit:NAL212_2234 hypothetical protein; hypothetical protein 2191379..2191738 Nitrosomonas sp. Is79A3 10934138 YP_004695227.1 CDS Nit79A3_2037 NC_015731.1 2191852 2194671 D TIGRFAM: Valyl-tRNA synthetase, class Ia; HAMAP: Valyl-tRNA synthetase; KEGG: nit:NAL212_2235 valyl-tRNA synthetase; valyl-tRNA synthetase 2191852..2194671 Nitrosomonas sp. Is79A3 10934139 YP_004695228.1 CDS Nit79A3_2038 NC_015731.1 2194781 2195416 R KEGG: mep:MPQ_2006 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(2194781..2195416) Nitrosomonas sp. Is79A3 10934140 YP_004695229.1 CDS Nit79A3_2039 NC_015731.1 2195770 2195943 D hypothetical protein 2195770..2195943 Nitrosomonas sp. Is79A3 10934141 YP_004695230.1 CDS Nit79A3_2040 NC_015731.1 2196501 2197847 D PFAM: Integrase, catalytic core, phage; KEGG: nit:NAL212_3061 integrase; integrase 2196501..2197847 Nitrosomonas sp. Is79A3 10934142 YP_004695231.1 CDS Nit79A3_2041 NC_015731.1 2197934 2198386 D hypothetical protein 2197934..2198386 Nitrosomonas sp. Is79A3 10934143 YP_004695232.1 CDS Nit79A3_2042 NC_015731.1 2198490 2199155 D KEGG: nit:NAL212_3063 hypothetical protein; hypothetical protein 2198490..2199155 Nitrosomonas sp. Is79A3 10934144 YP_004695233.1 CDS Nit79A3_2043 NC_015731.1 2199314 2199565 D KEGG: ajs:Ajs_3336 hypothetical protein; hypothetical protein 2199314..2199565 Nitrosomonas sp. Is79A3 10934145 YP_004695234.1 CDS Nit79A3_2044 NC_015731.1 2199606 2199764 D hypothetical protein 2199606..2199764 Nitrosomonas sp. Is79A3 10934146 YP_004695235.1 CDS Nit79A3_2045 NC_015731.1 2200218 2200574 D KEGG: nit:NAL212_3066 hypothetical protein; hypothetical protein 2200218..2200574 Nitrosomonas sp. Is79A3 10934147 YP_004695236.1 CDS Nit79A3_2046 NC_015731.1 2200571 2201059 D KEGG: rsc:RCFBP_11467 DNA primase-like protein; DNA primase-like protein 2200571..2201059 Nitrosomonas sp. Is79A3 10934148 YP_004695237.1 CDS Nit79A3_2047 NC_015731.1 2201111 2202145 D KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase 2201111..2202145 Nitrosomonas sp. Is79A3 10934149 YP_004695238.1 CDS Nit79A3_2048 NC_015731.1 2202155 2203237 D KEGG: rsc:RCFBP_11467 DNA primase-like protein; DNA primase-like protein 2202155..2203237 Nitrosomonas sp. Is79A3 10934150 YP_004695239.1 CDS Nit79A3_2049 NC_015731.1 2203241 2203606 D KEGG: nit:NAL212_3069 hypothetical protein; hypothetical protein 2203241..2203606 Nitrosomonas sp. Is79A3 10934151 YP_004695240.1 CDS Nit79A3_2050 NC_015731.1 2203729 2204262 D KEGG: nit:NAL212_3071 hypothetical protein; hypothetical protein 2203729..2204262 Nitrosomonas sp. Is79A3 10934152 YP_004695241.1 CDS Nit79A3_2051 NC_015731.1 2204371 2204562 D KEGG: nit:NAL212_3072 hypothetical protein; hypothetical protein 2204371..2204562 Nitrosomonas sp. Is79A3 10934153 YP_004695242.1 CDS Nit79A3_2052 NC_015731.1 2204920 2205162 D hypothetical protein 2204920..2205162 Nitrosomonas sp. Is79A3 10934154 YP_004695243.1 CDS Nit79A3_2053 NC_015731.1 2205469 2206335 R KEGG: nit:NAL212_2461 RIO-like kinase; PFAM: RIO-like kinase; SMART: RIO kinase; RIO-like kinase complement(2205469..2206335) Nitrosomonas sp. Is79A3 10934156 YP_004695244.1 CDS Nit79A3_2054 NC_015731.1 2206884 2208032 D KEGG: nit:NAL212_2460 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 2206884..2208032 Nitrosomonas sp. Is79A3 10934157 YP_004695245.1 CDS Nit79A3_2055 NC_015731.1 2208054 2209301 R PFAM: Sodium:dicarboxylate symporter; KEGG: nit:NAL212_2459 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter complement(2208054..2209301) Nitrosomonas sp. Is79A3 10934158 YP_004695246.1 CDS Nit79A3_2056 NC_015731.1 2209351 2210247 R KEGG: nit:NAL212_2458 coproporphyrinogen oxidase; HAMAP: Coproporphyrinogen-III oxidase, aerobic; PFAM: Coproporphyrinogen III oxidase; Coproporphyrinogen-III oxidase, aerobic complement(2209351..2210247) Nitrosomonas sp. Is79A3 10934159 YP_004695247.1 CDS Nit79A3_2057 NC_015731.1 2210307 2210426 R hypothetical protein complement(2210307..2210426) Nitrosomonas sp. Is79A3 10934160 YP_004695248.1 CDS Nit79A3_2058 NC_015731.1 2210584 2211759 D KEGG: nit:NAL212_0953 chorismate synthase; TIGRFAM: Chorismate synthase; PFAM: Chorismate synthase; chorismate synthase 2210584..2211759 Nitrosomonas sp. Is79A3 10934161 YP_004695249.1 CDS Nit79A3_2059 NC_015731.1 2211855 2212970 D PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein 2211855..2212970 Nitrosomonas sp. Is79A3 10934162 YP_004695250.1 CDS Nit79A3_2060 NC_015731.1 2213573 2213836 R KEGG: nit:NAL212_3141 hypothetical protein; hypothetical protein complement(2213573..2213836) Nitrosomonas sp. Is79A3 10934165 YP_004695251.1 CDS Nit79A3_2061 NC_015731.1 2214426 2214953 R KEGG: nit:NAL212_1959 hypothetical protein; hypothetical protein complement(2214426..2214953) Nitrosomonas sp. Is79A3 10934166 YP_004695252.1 CDS Nit79A3_2062 NC_015731.1 2215090 2215323 R KEGG: nit:NAL212_3070 hypothetical protein; hypothetical protein complement(2215090..2215323) Nitrosomonas sp. Is79A3 10934167 YP_004695253.1 CDS Nit79A3_2064 NC_015731.1 2216235 2216813 D PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; KEGG: app:CAP2UW1_0999 hydrogen dehydrogenase; NADH ubiquinone oxidoreductase 20 kDa subunit 2216235..2216813 Nitrosomonas sp. Is79A3 10934169 YP_004695254.1 CDS Nit79A3_2065 NC_015731.1 2216819 2218294 D PFAM: Nickel-dependent hydrogenase, large subunit; KEGG: mca:MCA0114 NAD-reducing hydrogenase, beta subunit; nickel-dependent hydrogenase large subunit 2216819..2218294 Nitrosomonas sp. Is79A3 10934170 YP_004695255.1 CDS Nit79A3_2066 NC_015731.1 2218481 2219467 D KEGG: amr:AM1_2585 hypothetical protein; hypothetical protein 2218481..2219467 Nitrosomonas sp. Is79A3 10934171 YP_004695256.1 CDS Nit79A3_2067 NC_015731.1 2219436 2219600 D hypothetical protein 2219436..2219600 Nitrosomonas sp. Is79A3 10934172 YP_004695257.1 CDS Nit79A3_2068 NC_015731.1 2219706 2219906 R KEGG: nit:NAL212_0888 hypothetical protein; hypothetical protein complement(2219706..2219906) Nitrosomonas sp. Is79A3 10934173 YP_004695258.1 CDS Nit79A3_2069 NC_015731.1 2219947 2220462 R PFAM: Lipocalin-like; KEGG: nit:NAL212_0887 lipocalin family protein; Lipocalin family protein complement(2219947..2220462) Nitrosomonas sp. Is79A3 10934174 YP_004695259.1 CDS Nit79A3_2071 NC_015731.1 2221798 2222016 D KEGG: nit:NAL212_0884 hypothetical protein; hypothetical protein 2221798..2222016 Nitrosomonas sp. Is79A3 10934176 YP_004695260.1 CDS Nit79A3_2072 NC_015731.1 2222106 2222324 D KEGG: nit:NAL212_0884 hypothetical protein; hypothetical protein 2222106..2222324 Nitrosomonas sp. Is79A3 10934177 YP_004695261.1 CDS Nit79A3_2073 NC_015731.1 2222436 2223404 R KEGG: nit:NAL212_0883 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein complement(2222436..2223404) Nitrosomonas sp. Is79A3 10934178 YP_004695262.1 CDS Nit79A3_2074 NC_015731.1 2223454 2225424 R TIGRFAM: Acetate--CoA ligase; HAMAP: Acetyl-coenzyme A synthetase; KEGG: nit:NAL212_0882 acetate/CoA ligase; PFAM: AMP-dependent synthetase/ligase; Acetyl-coenzyme A synthetase complement(2223454..2225424) Nitrosomonas sp. Is79A3 10934179 YP_004695263.1 CDS Nit79A3_2075 NC_015731.1 2225637 2226122 D KEGG: nit:NAL212_0881 hypothetical protein; HAMAP: Uncharacterised protein family UPF0090, bacteria; PFAM: Uncharacterised protein family UPF0090; Ribosome maturation factor rimP 2225637..2226122 Nitrosomonas sp. Is79A3 10934180 YP_004695264.1 CDS Nit79A3_2076 NC_015731.1 2226149 2227621 D KEGG: nit:NAL212_0880 NusA antitermination factor; TIGRFAM: Transcription termination factor NusA; Transcription termination factor NusA, C-terminal duplication; PFAM: Transcription factor NusA, N-terminal; Ribosomal protein S1, RNA binding domain; NusA antitermination factor 2226149..2227621 Nitrosomonas sp. Is79A3 10934181 YP_004695265.1 CDS Nit79A3_2077 NC_015731.1 2227703 2230351 D KEGG: nit:NAL212_0879 translation initiation factor IF-2; TIGRFAM: Initiation factor 2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Initiation factor 2 associated region, bacterial; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; translation initiation factor IF-2 2227703..2230351 Nitrosomonas sp. Is79A3 10934182 YP_004695266.1 CDS Nit79A3_2078 NC_015731.1 2230379 2230771 D TIGRFAM: Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; KEGG: nit:NAL212_0878 ribosome-binding factor A; PFAM: Ribosome-binding factor A; Ribosome-binding factor A 2230379..2230771 Nitrosomonas sp. Is79A3 10934183 YP_004695267.1 CDS Nit79A3_2079 NC_015731.1 2230784 2231755 D TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: nit:NAL212_0877 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; Pseudouridine synthase II, TruB, subfamily 1, C-terminal, bacterial-type; tRNA pseudouridine synthase B 2230784..2231755 Nitrosomonas sp. Is79A3 10934184 YP_004695268.1 CDS Nit79A3_2080 NC_015731.1 2231841 2232185 R PFAM: Protein of unknown function DUF486; KEGG: nit:NAL212_0823 hypothetical protein; hypothetical protein complement(2231841..2232185) Nitrosomonas sp. Is79A3 10934185 YP_004695269.1 CDS Nit79A3_2081 NC_015731.1 2232190 2232429 R hypothetical protein complement(2232190..2232429) Nitrosomonas sp. Is79A3 10934186 YP_004695270.1 CDS Nit79A3_2082 NC_015731.1 2232530 2233993 R TIGRFAM: Carboxylyase-related; HAMAP: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; KEGG: nit:NAL212_0822 UbiD family decarboxylase; PFAM: Carboxylyase-related; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(2232530..2233993) Nitrosomonas sp. Is79A3 10934187 YP_004695271.1 CDS Nit79A3_2083 NC_015731.1 2234005 2234874 R TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; HAMAP: 4-hydroxybenzoate octaprenyltransferase; KEGG: nit:NAL212_0821 4-hydroxybenzoate octaprenyltransferase; PFAM: UbiA prenyltransferase; 4-hydroxybenzoate octaprenyltransferase complement(2234005..2234874) Nitrosomonas sp. Is79A3 10934188 YP_004695272.1 CDS Nit79A3_2084 NC_015731.1 2234871 2235413 R KEGG: nit:NAL212_0820 chorismate--pyruvate lyase; HAMAP: Chorismate--pyruvate lyase; PFAM: Chorismate--pyruvate lyase; chorismate--pyruvate lyase complement(2234871..2235413) Nitrosomonas sp. Is79A3 10934189 YP_004695273.1 CDS Nit79A3_2085 NC_015731.1 2235687 2236187 R hypothetical protein complement(2235687..2236187) Nitrosomonas sp. Is79A3 10934190 YP_004695274.1 CDS Nit79A3_2086 NC_015731.1 2236411 2237280 R KEGG: pcr:Pcryo_1229 hypothetical protein; hypothetical protein complement(2236411..2237280) Nitrosomonas sp. Is79A3 10934191 YP_004695275.1 CDS Nit79A3_2087 NC_015731.1 2237416 2239455 R TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: nit:NAL212_1861 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; ATP-dependent DNA helicase RecG complement(2237416..2239455) Nitrosomonas sp. Is79A3 10934192 YP_004695276.1 CDS Nit79A3_2088 NC_015731.1 2239498 2239887 R KEGG: nit:NAL212_1860 endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP complement(2239498..2239887) Nitrosomonas sp. Is79A3 10934193 YP_004695277.1 CDS Nit79A3_2089 NC_015731.1 2240078 2241331 D TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: nit:NAL212_1859 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2240078..2241331 Nitrosomonas sp. Is79A3 10934194 YP_004695278.1 CDS Nit79A3_2090 NC_015731.1 2241420 2242034 R KEGG: nit:NAL212_1858 hypothetical protein; hypothetical protein complement(2241420..2242034) Nitrosomonas sp. Is79A3 10934195 YP_004695279.1 CDS Nit79A3_2091 NC_015731.1 2242369 2243829 D TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: nit:NAL212_1857 argininosuccinate lyase; PFAM: Fumarate lyase; Argininosuccinate lyase 2242369..2243829 Nitrosomonas sp. Is79A3 10934196 YP_004695280.1 CDS Nit79A3_2092 NC_015731.1 2243866 2244750 D PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: nit:NAL212_1856 fructosamine/ketosamine-3-kinase; Fructosamine/Ketosamine-3-kinase 2243866..2244750 Nitrosomonas sp. Is79A3 10934197 YP_004695281.1 CDS Nit79A3_2093 NC_015731.1 2244840 2246516 D TIGRFAM: CTP synthase; HAMAP: CTP synthase; KEGG: nit:NAL212_1855 CTP synthase; PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; CTP synthase 2244840..2246516 Nitrosomonas sp. Is79A3 10934198 YP_004695282.1 CDS Nit79A3_2094 NC_015731.1 2246582 2247865 D TIGRFAM: Enolase; HAMAP: Enolase; KEGG: nit:NAL212_1854 enolase; PFAM: Enolase, C-terminal; Enolase, N-terminal; enolase 2246582..2247865 Nitrosomonas sp. Is79A3 10934199 YP_004695283.1 CDS Nit79A3_2095 NC_015731.1 2247865 2248158 D KEGG: nit:NAL212_1853 septum formation initiator; HAMAP: Cell division protein ftsB-like protein; PFAM: Septum formation initiator; Cell division protein ftsB-like protein 2247865..2248158 Nitrosomonas sp. Is79A3 10934200 YP_004695284.1 CDS Nit79A3_2096 NC_015731.1 2248403 2249284 D HAMAP: protease htpX; KEGG: nit:NAL212_1852 peptidase M48 Ste24p; protease htpX 2248403..2249284 Nitrosomonas sp. Is79A3 10934201 YP_004695285.1 CDS Nit79A3_2097 NC_015731.1 2249379 2249723 R KEGG: nit:NAL212_1851 hypothetical protein; hypothetical protein complement(2249379..2249723) Nitrosomonas sp. Is79A3 10934202 YP_004695286.1 CDS Nit79A3_2098 NC_015731.1 2250046 2251329 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: tkm:TK90_1372 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase 2250046..2251329 Nitrosomonas sp. Is79A3 10934203 YP_004695287.1 CDS Nit79A3_2099 NC_015731.1 2251355 2253112 R KEGG: nit:NAL212_0404 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(2251355..2253112) Nitrosomonas sp. Is79A3 10934204 YP_004695288.1 CDS Nit79A3_2100 NC_015731.1 2253369 2253662 D hypothetical protein 2253369..2253662 Nitrosomonas sp. Is79A3 10934205 YP_004695289.1 CDS Nit79A3_2101 NC_015731.1 2253883 2254071 D PFAM: YcfA-like; KEGG: nhl:Nhal_0117 YcfA family protein; hypothetical protein 2253883..2254071 Nitrosomonas sp. Is79A3 10934206 YP_004695290.1 CDS Nit79A3_2102 NC_015731.1 2254075 2254287 D PFAM: Uncharacterised protein family UPF0150; KEGG: alv:Alvin_0648 hypothetical protein; hypothetical protein 2254075..2254287 Nitrosomonas sp. Is79A3 10934207 YP_004695291.1 CDS Nit79A3_2103 NC_015731.1 2254365 2255117 R PFAM: Alpha/beta hydrolase fold-1; KEGG: nit:NAL212_0398 alpha/beta hydrolase fold protein; alpha/beta hydrolase complement(2254365..2255117) Nitrosomonas sp. Is79A3 10934208 YP_004695292.1 CDS Nit79A3_2104 NC_015731.1 2255114 2256142 R PFAM: Peptidase M14, carboxypeptidase A; KEGG: hch:HCH_05013 zinc carboxypeptidase-related protein; peptidase M14 carboxypeptidase A complement(2255114..2256142) Nitrosomonas sp. Is79A3 10934209 YP_004695293.1 CDS Nit79A3_2105 NC_015731.1 2256353 2257162 D PFAM: Metallophosphoesterase; KEGG: nit:NAL212_0396 metallophosphoesterase; metallophosphoesterase 2256353..2257162 Nitrosomonas sp. Is79A3 10934210 YP_004695294.1 CDS Nit79A3_2106 NC_015731.1 2257169 2258092 D PFAM: Patatin; KEGG: nit:NAL212_0395 patatin; Patatin 2257169..2258092 Nitrosomonas sp. Is79A3 10934211 YP_004695295.1 CDS Nit79A3_2107 NC_015731.1 2258382 2259425 D TIGRFAM: Conserved hypothetical protein CHP00661; KEGG: nit:NAL212_0394 hypothetical protein; hypothetical protein 2258382..2259425 Nitrosomonas sp. Is79A3 10934212 YP_004695296.1 CDS Nit79A3_2108 NC_015731.1 2259496 2260500 D PFAM: Diacylglycerol kinase, catalytic region; KEGG: nit:NAL212_0393 diacylglycerol kinase catalytic region; diacylglycerol kinase catalytic region 2259496..2260500 Nitrosomonas sp. Is79A3 10934213 YP_004695297.1 CDS Nit79A3_2109 NC_015731.1 2260884 2261708 D KEGG: gvi:glr1903 hypothetical protein; hypothetical protein 2260884..2261708 Nitrosomonas sp. Is79A3 10934214 YP_004695298.1 CDS Nit79A3_2110 NC_015731.1 2261720 2262634 D KEGG: pbr:PB2503_07444 hypothetical protein; hypothetical protein 2261720..2262634 Nitrosomonas sp. Is79A3 10934215 YP_004695299.1 CDS Nit79A3_2111 NC_015731.1 2262665 2263075 D hypothetical protein 2262665..2263075 Nitrosomonas sp. Is79A3 10934216 YP_004695300.1 CDS Nit79A3_2112 NC_015731.1 2263280 2263438 D KEGG: nit:NAL212_0847 34 kDa membrane antigen; hypothetical protein 2263280..2263438 Nitrosomonas sp. Is79A3 10934217 YP_004695301.1 CDS Nit79A3_2113 NC_015731.1 2263595 2264896 R PFAM: Major facilitator superfamily MFS-1; KEGG: nit:NAL212_2498 major facilitator transporter; major facilitator superfamily protein complement(2263595..2264896) Nitrosomonas sp. Is79A3 10934218 YP_004695302.1 CDS Nit79A3_2114 NC_015731.1 2264931 2266316 R TIGRFAM: Fumarate hydratase, class II; HAMAP: Fumarate hydratase class II; KEGG: nit:NAL212_2499 fumarate hydratase, class II; PFAM: Fumarate lyase; Fumarase C, C-terminal; Fumarate hydratase class II complement(2264931..2266316) Nitrosomonas sp. Is79A3 10934219 YP_004695303.1 CDS Nit79A3_2115 NC_015731.1 2266399 2266731 R KEGG: nit:NAL212_2500 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein complement(2266399..2266731) Nitrosomonas sp. Is79A3 10934220 YP_004695304.1 CDS Nit79A3_2116 NC_015731.1 2266715 2266972 R PFAM: Plasmid stabilisation system; KEGG: nit:NAL212_2501 plasmid stabilization system; plasmid stabilization system complement(2266715..2266972) Nitrosomonas sp. Is79A3 10934221 YP_004695305.1 CDS Nit79A3_2118 NC_015731.1 2267578 2267760 R KEGG: eca:ECA2896 hypothetical protein; hypothetical protein complement(2267578..2267760) Nitrosomonas sp. Is79A3 10934223 YP_004695306.1 CDS Nit79A3_2119 NC_015731.1 2267868 2268545 R KEGG: cpc:Cpar_1103 hypothetical protein; hypothetical protein complement(2267868..2268545) Nitrosomonas sp. Is79A3 10934224 YP_004695307.1 CDS Nit79A3_2120 NC_015731.1 2268629 2269825 R PFAM: Ribonucleotide reductase; KEGG: nit:NAL212_2505 ribonucleoside-diphosphate reductase; ribonucleotide reductase complement(2268629..2269825) Nitrosomonas sp. Is79A3 10934225 YP_004695308.1 CDS Nit79A3_2121 NC_015731.1 2269860 2272724 R KEGG: nit:NAL212_2506 ribonucleoside-diphosphate reductase, alpha subunit; TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ATP-cone; ribonucleoside-diphosphate reductase subunit alpha complement(2269860..2272724) Nitrosomonas sp. Is79A3 10934226 YP_004695309.1 CDS Nit79A3_2122 NC_015731.1 2273383 2274174 R PFAM: Carbonic anhydrase, alpha-class, catalytic domain; KEGG: nit:NAL212_1475 carbonate dehydratase; carbonic anhydrase complement(2273383..2274174) Nitrosomonas sp. Is79A3 10934227 YP_004695310.1 CDS Nit79A3_2123 NC_015731.1 2274214 2274450 R KEGG: nit:NAL212_1476 hypothetical protein; hypothetical protein complement(2274214..2274450) Nitrosomonas sp. Is79A3 10934228 YP_004695311.1 CDS Nit79A3_2124 NC_015731.1 2274603 2275775 R PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: nit:NAL212_0930 ornithine decarboxylase; Orn/DAP/Arg decarboxylase 2 complement(2274603..2275775) Nitrosomonas sp. Is79A3 10934229 YP_004695312.1 CDS Nit79A3_2125 NC_015731.1 2275961 2276293 R KEGG: nit:NAL212_2551 hypothetical protein; hypothetical protein complement(2275961..2276293) Nitrosomonas sp. Is79A3 10934230 YP_004695313.1 CDS Nit79A3_2126 NC_015731.1 2276799 2277089 D KEGG: nit:NAL212_2553 hypothetical protein; hypothetical protein 2276799..2277089 Nitrosomonas sp. Is79A3 10934231 YP_004695314.1 CDS Nit79A3_2127 NC_015731.1 2277739 2279124 R KEGG: dar:Daro_2081 phospholipase D/transphosphatidylase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; phospholipase D/Transphosphatidylase complement(2277739..2279124) Nitrosomonas sp. Is79A3 10934232 YP_004695315.1 CDS Nit79A3_2128 NC_015731.1 2279559 2279996 D PFAM: Collagen-binding surface protein Cna-like, B region; KEGG: nmu:Nmul_A1517 hypothetical protein; Cna B domain-containing protein 2279559..2279996 Nitrosomonas sp. Is79A3 10934233 YP_004695316.1 CDS Nit79A3_2130 NC_015731.1 2280484 2280681 R hypothetical protein complement(2280484..2280681) Nitrosomonas sp. Is79A3 10934235 YP_004695317.1 CDS Nit79A3_2131 NC_015731.1 2280931 2282706 R TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: dar:Daro_1362 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(2280931..2282706) Nitrosomonas sp. Is79A3 10934236 YP_004695318.1 CDS Nit79A3_2132 NC_015731.1 2283034 2283513 D PFAM: ABC transporter-like; KEGG: nmu:Nmul_A0982 spermidine/putrescine ABC transporter ATP-binding subunit; ABC transporter 2283034..2283513 Nitrosomonas sp. Is79A3 10934237 YP_004695319.1 CDS Nit79A3_2133 NC_015731.1 2283802 2284587 R PFAM: Carbonic anhydrase, alpha-class, catalytic domain; KEGG: nit:NAL212_1475 carbonate dehydratase; carbonic anhydrase complement(2283802..2284587) Nitrosomonas sp. Is79A3 10934238 YP_004695320.1 CDS Nit79A3_2134 NC_015731.1 2284619 2284840 R KEGG: nit:NAL212_1476 hypothetical protein; hypothetical protein complement(2284619..2284840) Nitrosomonas sp. Is79A3 10934239 YP_004695321.1 CDS Nit79A3_2136 NC_015731.1 2285412 2289488 R KEGG: plt:Plut_1811 hypothetical protein; hypothetical protein complement(2285412..2289488) Nitrosomonas sp. Is79A3 10934241 YP_004695322.1 CDS Nit79A3_2137 NC_015731.1 2289961 2290548 D KEGG: nit:NAL212_1915 hypothetical protein; hypothetical protein 2289961..2290548 Nitrosomonas sp. Is79A3 10934242 YP_004695323.1 CDS Nit79A3_2140 NC_015731.1 2292295 2292849 R hypothetical protein complement(2292295..2292849) Nitrosomonas sp. Is79A3 10934245 YP_004695324.1 CDS Nit79A3_2141 NC_015731.1 2292987 2293505 R PFAM: GCN5-related N-acetyltransferase; KEGG: nit:NAL212_1936 GCN5-like N-acetyltransferase; GCN5-like N-acetyltransferase complement(2292987..2293505) Nitrosomonas sp. Is79A3 10934246 YP_004695325.1 CDS Nit79A3_2142 NC_015731.1 2293555 2293935 R PFAM: Invasion gene expression up-regulator, SirB; KEGG: nit:NAL212_1937 invasion gene expression up-regulator SirB; Invasion gene expression up-regulator SirB complement(2293555..2293935) Nitrosomonas sp. Is79A3 10934247 YP_004695326.1 CDS Nit79A3_2143 NC_015731.1 2293938 2294423 R KEGG: nit:NAL212_1938 hypothetical protein; hypothetical protein complement(2293938..2294423) Nitrosomonas sp. Is79A3 10934248 YP_004695327.1 CDS Nit79A3_2144 NC_015731.1 2294540 2294896 R KEGG: nit:NAL212_1939 hypothetical protein; hypothetical protein complement(2294540..2294896) Nitrosomonas sp. Is79A3 10934249 YP_004695328.1 CDS Nit79A3_2145 NC_015731.1 2294982 2295827 R PFAM: Protein of unknown function DUF6, transmembrane; KEGG: nit:NAL212_1940 hypothetical protein; hypothetical protein complement(2294982..2295827) Nitrosomonas sp. Is79A3 10934250 YP_004695329.1 CDS Nit79A3_2146 NC_015731.1 2295887 2296993 R PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: nit:NAL212_1941 rieske (2Fe-2S) iron-sulfur domain; Rieske (2Fe-2S) iron-sulfur domain-containing protein complement(2295887..2296993) Nitrosomonas sp. Is79A3 10934251 YP_004695330.1 CDS Nit79A3_2147 NC_015731.1 2297218 2298642 D KEGG: nit:NAL212_1942 hypothetical protein; hypothetical protein 2297218..2298642 Nitrosomonas sp. Is79A3 10934252 YP_004695331.1 CDS Nit79A3_2148 NC_015731.1 2298878 2301064 D TIGRFAM: Primosomal protein n; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: nit:NAL212_1943 primosomal protein N'; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; primosomal protein N' 2298878..2301064 Nitrosomonas sp. Is79A3 10934253 YP_004695332.1 CDS Nit79A3_2149 NC_015731.1 2301140 2301376 D PFAM: Protein of unknown function DUF465; KEGG: nit:NAL212_1556 hypothetical protein; hypothetical protein 2301140..2301376 Nitrosomonas sp. Is79A3 10934254 YP_004695333.1 CDS Nit79A3_2150 NC_015731.1 2301465 2301905 R KEGG: nit:NAL212_2507 hypothetical protein; HAMAP: Protein of unknown function DUF188; PFAM: Protein of unknown function DUF188; hypothetical protein complement(2301465..2301905) Nitrosomonas sp. Is79A3 10934255 YP_004695334.1 CDS Nit79A3_2151 NC_015731.1 2301936 2302520 R KEGG: nit:NAL212_2508 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase complement(2301936..2302520) Nitrosomonas sp. Is79A3 10934256 YP_004695335.1 CDS Nit79A3_2152 NC_015731.1 2302585 2304402 R SMART: Excinuclease ABC, C subunit, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; TIGRFAM: Excinuclease ABC, C subunit; KEGG: nit:NAL212_2509 UvrABC system protein C; HAMAP: UvrABC system protein C; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; Helix-hairpin-helix motif; UvrABC system protein C complement(2302585..2304402) Nitrosomonas sp. Is79A3 10934257 YP_004695336.1 CDS Nit79A3_2153 NC_015731.1 2304408 2304596 R PFAM: 4-oxalocrotonate tautomerase; KEGG: nit:NAL212_2510 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(2304408..2304596) Nitrosomonas sp. Is79A3 10934258 YP_004695337.1 CDS Nit79A3_2154 NC_015731.1 2304630 2305304 R PFAM: Uracil-DNA glycosylase-like; KEGG: nit:NAL212_2511 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase complement(2304630..2305304) Nitrosomonas sp. Is79A3 10934259 YP_004695338.1 CDS Nit79A3_2155 NC_015731.1 2305464 2307251 D PFAM: Bacterial surface antigen (D15); Surface antigen variable number; KEGG: nit:NAL212_1792 surface antigen (D15); surface antigen (D15) 2305464..2307251 Nitrosomonas sp. Is79A3 10934260 YP_004695339.1 CDS Nit79A3_2156 NC_015731.1 2307261 2311097 D PFAM: Protein of unknown function DUF490; KEGG: nit:NAL212_1791 hypothetical protein; hypothetical protein 2307261..2311097 Nitrosomonas sp. Is79A3 10934261 YP_004695340.1 CDS Nit79A3_2157 NC_015731.1 2311275 2311556 D PFAM: Plasmid maintenance system killer; KEGG: gur:Gura_0413 plasmid maintenance system killer; plasmid maintenance system killer 2311275..2311556 Nitrosomonas sp. Is79A3 10934262 YP_004695341.1 CDS Nit79A3_2158 NC_015731.1 2311568 2311864 D TIGRFAM: Addiction module antidote protein, HigA; PFAM: Helix-turn-helix type 3; KEGG: geb:GM18_1267 XRE family plasmid maintenance system antidote protein; SMART: Helix-turn-helix type 3; XRE family transcriptional regulator 2311568..2311864 Nitrosomonas sp. Is79A3 10934263 YP_004695342.1 CDS Nit79A3_2159 NC_015731.1 2312261 2312674 D KEGG: nit:NAL212_1951 hypothetical protein; hypothetical protein 2312261..2312674 Nitrosomonas sp. Is79A3 10934264 YP_004695343.1 CDS Nit79A3_2160 NC_015731.1 2312743 2315580 D KEGG: nit:NAL212_1951 hypothetical protein; hypothetical protein 2312743..2315580 Nitrosomonas sp. Is79A3 10934265 YP_004695344.1 CDS Nit79A3_2161 NC_015731.1 2315635 2317032 R TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; HAMAP: GTP-binding, EngA; KEGG: nit:NAL212_1231 ribosome-associated GTPase EngA; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein engA complement(2315635..2317032) Nitrosomonas sp. Is79A3 10934266 YP_004695345.1 CDS Nit79A3_2162 NC_015731.1 2317291 2318430 R TIGRFAM: Outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat; KEGG: nit:NAL212_1230 outer membrane assembly lipoprotein YfgL; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; outer membrane assembly lipoprotein YfgL complement(2317291..2318430) Nitrosomonas sp. Is79A3 10934267 YP_004695346.1 CDS Nit79A3_2163 NC_015731.1 2318531 2319169 R PFAM: Protein of unknown function DUF2133; KEGG: nit:NAL212_1229 hypothetical protein; hypothetical protein complement(2318531..2319169) Nitrosomonas sp. Is79A3 10934268 YP_004695347.1 CDS Nit79A3_2164 NC_015731.1 2319258 2320526 R TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: nit:NAL212_1228 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; Histidyl-tRNA synthetase complement(2319258..2320526) Nitrosomonas sp. Is79A3 10934269 YP_004695348.1 CDS Nit79A3_2165 NC_015731.1 2320526 2321764 R TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; KEGG: nit:NAL212_1227 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(2320526..2321764) Nitrosomonas sp. Is79A3 10934270 YP_004695349.1 CDS Nit79A3_2166 NC_015731.1 2321806 2323038 R SMART: Helix-turn-helix type 3; KEGG: nit:NAL212_1226 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(2321806..2323038) Nitrosomonas sp. Is79A3 10934271 YP_004695350.1 CDS Nit79A3_2167 NC_015731.1 2323038 2323823 R KEGG: nit:NAL212_1225 type IV pilus biogenesis/stability protein PilW; TIGRFAM: Pilus biogenesis/stability type IV, PilW; PFAM: Tetratricopeptide TPR-1; type IV pilus biogenesis/stability protein PilW complement(2323038..2323823) Nitrosomonas sp. Is79A3 10934272 YP_004695351.1 CDS Nit79A3_2168 NC_015731.1 2323820 2324920 R TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; KEGG: nit:NAL212_1224 ribosomal RNA large subunit methyltransferase N; PFAM: Radical SAM; Ribosomal RNA large subunit methyltransferase N complement(2323820..2324920) Nitrosomonas sp. Is79A3 10934273 YP_004695352.1 CDS Nit79A3_2169 NC_015731.1 2324941 2325366 R HAMAP: Nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase, core; KEGG: nit:NAL212_1223 nucleoside-diphosphate kinase; SMART: Nucleoside diphosphate kinase, core; Nucleoside diphosphate kinase complement(2324941..2325366) Nitrosomonas sp. Is79A3 10934274 YP_004695353.1 CDS Nit79A3_2170 NC_015731.1 2325519 2325974 R KEGG: tgr:Tgr7_0713 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; Rhodanese-like protein complement(2325519..2325974) Nitrosomonas sp. Is79A3 10934275 YP_004695354.1 CDS Nit79A3_2171 NC_015731.1 2326019 2326852 R KEGG: nit:NAL212_1221 hypothetical protein; hypothetical protein complement(2326019..2326852) Nitrosomonas sp. Is79A3 10934276 YP_004695355.1 CDS Nit79A3_2172 NC_015731.1 2326894 2327640 R PFAM: Protein of unknown function DUF540; KEGG: nit:NAL212_1220 hypothetical protein; hypothetical protein complement(2326894..2327640) Nitrosomonas sp. Is79A3 10934277 YP_004695356.1 CDS Nit79A3_2173 NC_015731.1 2327948 2328253 D KEGG: nit:NAL212_1219 flagellar biosynthesis anti-sigma factor protein FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor protein FlgM; PFAM: Anti-sigma-28 factor, FlgM; flagellar biosynthesis anti-sigma factor protein FlgM 2327948..2328253 Nitrosomonas sp. Is79A3 10934278 YP_004695357.1 CDS Nit79A3_2174 NC_015731.1 2328253 2328708 D PFAM: FlgN; KEGG: nit:NAL212_1218 FlgN family protein; FlgN family protein 2328253..2328708 Nitrosomonas sp. Is79A3 10934279 YP_004695358.1 CDS Nit79A3_2175 NC_015731.1 2328717 2329511 R PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: nit:NAL212_1217 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein complement(2328717..2329511) Nitrosomonas sp. Is79A3 10934280 YP_004695359.1 CDS Nit79A3_2176 NC_015731.1 2329558 2330316 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: nit:NAL212_1216 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(2329558..2330316) Nitrosomonas sp. Is79A3 10934281 YP_004695360.1 CDS Nit79A3_2177 NC_015731.1 2330359 2331075 R KEGG: nit:NAL212_1215 RNA polymerase, sigma 28 subunit, FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase, sigma 28 subunit, FliA/WhiG complement(2330359..2331075) Nitrosomonas sp. Is79A3 10934282 YP_004695361.1 CDS Nit79A3_2178 NC_015731.1 2331082 2331978 R KEGG: nit:NAL212_1214 cobyrinic acid ac-diamide synthase; cobyrinic acid ac-diamide synthase complement(2331082..2331978) Nitrosomonas sp. Is79A3 10934283 YP_004695362.1 CDS Nit79A3_2179 NC_015731.1 2331971 2333260 R TIGRFAM: Signal-recognition particle (SRP)-type GTPase; PFAM: Signal recognition particle, SRP54 subunit, GTPase; KEGG: nit:NAL212_1213 flagellar biosynthetic protein FlhF; SMART: ATPase, AAA+ type, core; flagellar biosynthetic protein FlhF complement(2331971..2333260) Nitrosomonas sp. Is79A3 10934284 YP_004695363.1 CDS Nit79A3_2180 NC_015731.1 2333257 2335341 R KEGG: nit:NAL212_1212 flagellar biosynthesis protein FlhA; TIGRFAM: Flagellar biosynthesis protein FlhA; PFAM: Type III secretion system FHIPEP; flagellar biosynthesis protein FlhA complement(2333257..2335341) Nitrosomonas sp. Is79A3 10934285 YP_004695364.1 CDS Nit79A3_2181 NC_015731.1 2335402 2336544 R KEGG: nit:NAL212_1211 flagellar biosynthetic protein FlhB; TIGRFAM: Flagellar biosynthetic protein FlhB; PFAM: Type III secretion exporter; flagellar biosynthetic protein FlhB complement(2335402..2336544) Nitrosomonas sp. Is79A3 10934286 YP_004695365.1 CDS Nit79A3_2182 NC_015731.1 2336767 2339154 D PFAM: Peptidase S45, penicillin amidase; KEGG: nit:NAL212_1210 acyl-homoserine-lactone acylase; peptidase S45 penicillin amidase 2336767..2339154 Nitrosomonas sp. Is79A3 10934287 YP_004695366.1 CDS Nit79A3_2183 NC_015731.1 2339443 2340750 D KEGG: nit:NAL212_1380 hypothetical protein; hypothetical protein 2339443..2340750 Nitrosomonas sp. Is79A3 10934288 YP_004695367.1 CDS Nit79A3_2184 NC_015731.1 2340747 2342192 D KEGG: nit:NAL212_1381 undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; UDP-phosphate glucose phosphotransferase 2340747..2342192 Nitrosomonas sp. Is79A3 10934289 YP_004695368.1 CDS Nit79A3_2185 NC_015731.1 2342392 2342784 R KEGG: nit:NAL212_1056 hypothetical protein; hypothetical protein complement(2342392..2342784) Nitrosomonas sp. Is79A3 10934290 YP_004695369.1 CDS Nit79A3_2186 NC_015731.1 2343177 2343785 D PFAM: LemA; KEGG: nit:NAL212_2014 LemA family protein; LemA family protein 2343177..2343785 Nitrosomonas sp. Is79A3 10934291 YP_004695370.1 CDS Nit79A3_2187 NC_015731.1 2343848 2344744 D PFAM: Protein of unknown function DUF477; KEGG: nit:NAL212_2015 hypothetical protein; hypothetical protein 2343848..2344744 Nitrosomonas sp. Is79A3 10934292 YP_004695371.1 CDS Nit79A3_2188 NC_015731.1 2344745 2345248 D PFAM: Protein of unknown function DUF477; KEGG: nit:NAL212_2016 hypothetical protein; hypothetical protein 2344745..2345248 Nitrosomonas sp. Is79A3 10934293 YP_004695372.1 CDS Nit79A3_2189 NC_015731.1 2345302 2345745 D TIGRFAM: Peptidase A31, hydrogen uptake protein; KEGG: nmu:Nmul_A1675 HoxW protein; hydrogenase maturation protease 2345302..2345745 Nitrosomonas sp. Is79A3 10934294 YP_004695373.1 CDS Nit79A3_2190 NC_015731.1 2345742 2346356 D KEGG: gca:Galf_1580 HupE/UreJ protein; HupE/UreJ protein 2345742..2346356 Nitrosomonas sp. Is79A3 10934295 YP_004695374.1 CDS Nit79A3_2191 NC_015731.1 2346375 2346716 D TIGRFAM: Hydrogenase nickel incorporation protein HypA/HybF; HAMAP: Hydrogenase nickel incorporation protein HypA/HybF; KEGG: slt:Slit_2425 hydrogenase nickel insertion protein HypA; PFAM: Hydrogenase nickel incorporation protein HypA/HybF; hydrogenase nickel incorporation protein hypA 2346375..2346716 Nitrosomonas sp. Is79A3 10934296 YP_004695375.1 CDS Nit79A3_2192 NC_015731.1 2346727 2347641 D KEGG: slt:Slit_2424 hydrogenase accessory protein HypB; TIGRFAM: Hydrogenase accessory protein HypB; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; hydrogenase accessory protein HypB 2346727..2347641 Nitrosomonas sp. Is79A3 10934297 YP_004695376.1 CDS Nit79A3_2194 NC_015731.1 2348790 2349644 D PFAM: Heat shock protein Hsp33 protein; KEGG: nit:NAL212_1286 HSP33 protein; heat shock protein 33 2348790..2349644 Nitrosomonas sp. Is79A3 10934299 YP_004695377.1 CDS Nit79A3_2195 NC_015731.1 2349829 2353110 D KEGG: nhl:Nhal_1559 hypothetical protein; hypothetical protein 2349829..2353110 Nitrosomonas sp. Is79A3 10934300 YP_004695378.1 CDS Nit79A3_2196 NC_015731.1 2353358 2353747 D KEGG: nit:NAL212_1285 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 2353358..2353747 Nitrosomonas sp. Is79A3 10934301 YP_004695379.1 CDS Nit79A3_2197 NC_015731.1 2353769 2355196 D KEGG: nit:NAL212_1284 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; integral membrane sensor signal transduction histidine kinase 2353769..2355196 Nitrosomonas sp. Is79A3 10934302 YP_004695380.1 CDS Nit79A3_2198 NC_015731.1 2355253 2357646 R KEGG: nit:NAL212_1283 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 complement(2355253..2357646) Nitrosomonas sp. Is79A3 10934303 YP_004695381.1 CDS Nit79A3_2199 NC_015731.1 2357757 2360678 D SMART: MCP methyltransferase, CheR-type; PAS; TIGRFAM: PAS; KEGG: naz:Aazo_2376 signal transduction histidine kinase with CheB and CheR activity; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; MCP methyltransferase, CheR-type; PAS fold; chemotaxis protein CheR 2357757..2360678 Nitrosomonas sp. Is79A3 10934304 YP_004695382.1 CDS Nit79A3_2200 NC_015731.1 2360682 2361890 D KEGG: mfa:Mfla_0814 signal transduction histidine kinase, glucose-6-phosphate specific; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; PAS; PAS/PAC sensor signal transduction histidine kinase 2360682..2361890 Nitrosomonas sp. Is79A3 10934305 YP_004695383.1 CDS Nit79A3_2201 NC_015731.1 2361859 2362500 D KEGG: mmb:Mmol_1373 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 2361859..2362500 Nitrosomonas sp. Is79A3 10934306 YP_004695384.1 CDS Nit79A3_2202 NC_015731.1 2362784 2363833 D PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: nit:NAL212_1723 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 2362784..2363833 Nitrosomonas sp. Is79A3 10934307 YP_004695385.1 CDS Nit79A3_2203 NC_015731.1 2363919 2364593 R KEGG: nit:NAL212_1724 Sel1 domain-containing protein repeat-containing protein; PFAM: Sel1-like; SMART: Sel1-like; Sel1 domain-containing protein complement(2363919..2364593) Nitrosomonas sp. Is79A3 10934308 YP_004695386.1 CDS Nit79A3_2204 NC_015731.1 2364678 2365427 R PFAM: Ankyrin repeat; KEGG: nit:NAL212_1725 ankyrin; Ankyrin complement(2364678..2365427) Nitrosomonas sp. Is79A3 10934309 YP_004695387.1 CDS Nit79A3_2205 NC_015731.1 2365766 2366938 D KEGG: nit:NAL212_1726 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: FAD dependent oxidoreductase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 2365766..2366938 Nitrosomonas sp. Is79A3 10934310 YP_004695388.1 CDS Nit79A3_2206 NC_015731.1 2367114 2368121 D KEGG: nit:NAL212_1727 TIM-barrel protein, nifR3 family; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; PFAM: tRNA-dihydrouridine synthase; nitrogen regulator protein NIfR3 2367114..2368121 Nitrosomonas sp. Is79A3 10934311 YP_004695389.1 CDS Nit79A3_2207 NC_015731.1 2368125 2368367 D PFAM: Helix-turn-helix, Fis-type; KEGG: nit:NAL212_1728 transcriptional regulator, Fis family; Fis family transcriptional regulator 2368125..2368367 Nitrosomonas sp. Is79A3 10934312 YP_004695390.1 CDS Nit79A3_2208 NC_015731.1 2368364 2369923 D SMART: AICARFT/IMPCHase bienzyme, formylation region; TIGRFAM: AICARFT/IMPCHase bienzyme; KEGG: nit:NAL212_1729 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; HAMAP: Bifunctional purine biosynthesis protein purH; PFAM: AICARFT/IMPCHase bienzyme, formylation region; MGS-like; Bifunctional purine biosynthesis protein purH 2368364..2369923 Nitrosomonas sp. Is79A3 10934313 YP_004695391.1 CDS Nit79A3_2209 NC_015731.1 2369940 2371247 D TIGRFAM: Phosphoribosylglycinamide synthetase; HAMAP: Phosphoribosylglycinamide synthetase; KEGG: nit:NAL212_1730 phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; Phosphoribosylamine--glycine ligase 2369940..2371247 Nitrosomonas sp. Is79A3 10934314 YP_004695392.1 CDS Nit79A3_2210 NC_015731.1 2371271 2372479 R KEGG: gca:Galf_1053 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; flagellar hook-associated protein 3 complement(2371271..2372479) Nitrosomonas sp. Is79A3 10934315 YP_004695393.1 CDS Nit79A3_2211 NC_015731.1 2372503 2374419 R KEGG: nit:NAL212_1733 flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; flagellar hook-associated protein FlgK complement(2372503..2374419) Nitrosomonas sp. Is79A3 10934316 YP_004695394.1 CDS Nit79A3_2212 NC_015731.1 2374502 2375509 R TIGRFAM: Flagellar protein FlgJ type-2; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ, N-terminal; KEGG: nit:NAL212_1734 flagellar rod assembly protein/muramidase FlgJ; SMART: Lysozyme subfamily 2; flagellar rod assembly protein/muramidase FlgJ complement(2374502..2375509) Nitrosomonas sp. Is79A3 10934317 YP_004695395.1 CDS Nit79A3_2213 NC_015731.1 2375528 2376637 R KEGG: nit:NAL212_1735 flagellar P-ring protein; HAMAP: Flagellar P-ring protein; PFAM: Flagellar P-ring protein; Flagellar P-ring protein complement(2375528..2376637) Nitrosomonas sp. Is79A3 10934318 YP_004695396.1 CDS Nit79A3_2214 NC_015731.1 2376688 2377404 R KEGG: nit:NAL212_1736 flagellar L-ring protein; HAMAP: Flagellar L-ring protein; PFAM: Flagellar L-ring protein; Flagellar L-ring protein complement(2376688..2377404) Nitrosomonas sp. Is79A3 10934319 YP_004695397.1 CDS Nit79A3_2215 NC_015731.1 2377431 2378213 R KEGG: nit:NAL212_1737 flagellar basal-body rod protein FlgG; TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; flagellar basal-body rod protein FlgG complement(2377431..2378213) Nitrosomonas sp. Is79A3 10934320 YP_004695398.1 CDS Nit79A3_2216 NC_015731.1 2378244 2378987 R KEGG: nit:NAL212_1738 flagellar basal-body rod protein FlgF; TIGRFAM: Flagellar basal-body rod FlgF; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body rod protein, N-terminal; Ribosomal protein L6, alpha-beta domain; flagellar basal body rod protein FlgF complement(2378244..2378987) Nitrosomonas sp. Is79A3 10934321 YP_004695399.1 CDS Nit79A3_2217 NC_015731.1 2379016 2380284 R KEGG: nit:NAL212_1739 fagellar hook-basal body protein; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body FlaE; Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal; flagellar hook-basal body protein complement(2379016..2380284) Nitrosomonas sp. Is79A3 10934322 YP_004695400.1 CDS Nit79A3_2218 NC_015731.1 2380298 2380963 R PFAM: Flagellar hook capping protein; KEGG: nit:NAL212_1740 flagellar hook capping protein; flagellar hook capping protein complement(2380298..2380963) Nitrosomonas sp. Is79A3 10934323 YP_004695401.1 CDS Nit79A3_2219 NC_015731.1 2380975 2381379 R KEGG: nit:NAL212_1741 flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; flagellar basal body rod protein FlgC complement(2380975..2381379) Nitrosomonas sp. Is79A3 10934324 YP_004695402.1 CDS Nit79A3_2220 NC_015731.1 2381382 2381792 R KEGG: nit:NAL212_1743 flagellar basal-body rod protein FlgB; TIGRFAM: Flagellar basal-body rod protein FlgB; PFAM: Flagellar basal body rod protein, N-terminal; flagellar basal-body rod protein FlgB complement(2381382..2381792) Nitrosomonas sp. Is79A3 10934325 YP_004695403.1 CDS Nit79A3_2221 NC_015731.1 2382020 2382721 D KEGG: nit:NAL212_1744 flagella basal body P-ring formation protein FlgA; TIGRFAM: Flagella basal body P-ring formation protein FlgA; PFAM: SAF domain; flagellar basal body P-ring biosynthesis protein FlgA 2382020..2382721 Nitrosomonas sp. Is79A3 10934326 YP_004695404.1 CDS Nit79A3_2222 NC_015731.1 2382864 2383157 D KEGG: nit:NAL212_1745 hypothetical protein; hypothetical protein 2382864..2383157 Nitrosomonas sp. Is79A3 10934327 YP_004695405.1 CDS Nit79A3_2223 NC_015731.1 2383265 2383633 D PFAM: Protein of unknown function DUF498; KEGG: nit:NAL212_1746 hypothetical protein; hypothetical protein 2383265..2383633 Nitrosomonas sp. Is79A3 10934328 YP_004695406.1 CDS Nit79A3_2224 NC_015731.1 2383844 2384071 D KEGG: nit:NAL212_2372 hypothetical protein; hypothetical protein 2383844..2384071 Nitrosomonas sp. Is79A3 10934329 YP_004695407.1 CDS Nit79A3_2225 NC_015731.1 2384784 2385611 D PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; KEGG: nit:NAL212_2373 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 2384784..2385611 Nitrosomonas sp. Is79A3 10934330 YP_004695408.1 CDS Nit79A3_2226 NC_015731.1 2385624 2387129 R PFAM: Peptidase M32, carboxypeptidase Taq metallopeptidase; KEGG: nit:NAL212_2374 carboxypeptidase Taq; peptidase M32 carboxypeptidase Taq metallopeptidase complement(2385624..2387129) Nitrosomonas sp. Is79A3 10934331 YP_004695409.1 CDS Nit79A3_2227 NC_015731.1 2387250 2387687 D KEGG: nit:NAL212_2375 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00701; PFAM: Uncharacterised protein family UPF0093; hypothetical protein 2387250..2387687 Nitrosomonas sp. Is79A3 10934332 YP_004695410.1 CDS Nit79A3_2228 NC_015731.1 2387757 2388041 R KEGG: nit:NAL212_2376 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein complement(2387757..2388041) Nitrosomonas sp. Is79A3 10934333 YP_004695411.1 CDS Nit79A3_2229 NC_015731.1 2388038 2388391 R PFAM: Protein of unknown function DUF891; KEGG: pph:Ppha_2124 protein of unknown function DUF891; hypothetical protein complement(2388038..2388391) Nitrosomonas sp. Is79A3 10934334 YP_004695412.1 CDS Nit79A3_2230 NC_015731.1 2388493 2389080 R hypothetical protein complement(2388493..2389080) Nitrosomonas sp. Is79A3 10934335 YP_004695413.1 CDS Nit79A3_2231 NC_015731.1 2389132 2389665 R TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: nit:NAL212_2409 peptide deformylase; PFAM: Formylmethionine deformylase; peptide deformylase complement(2389132..2389665) Nitrosomonas sp. Is79A3 10934336 YP_004695414.1 CDS Nit79A3_2232 NC_015731.1 2389655 2390401 R PFAM: Nucleoside phosphorylase; KEGG: nit:NAL212_2410 S-methyl-5'-thioadenosine phosphorylase; purine or other phosphorylase 1 complement(2389655..2390401) Nitrosomonas sp. Is79A3 10934337 YP_004695415.1 CDS Nit79A3_2233 NC_015731.1 2390414 2390959 R PFAM: Phosphoribosyltransferase; KEGG: nit:NAL212_2411 phosphoribosyltransferase; phosphoribosyltransferase complement(2390414..2390959) Nitrosomonas sp. Is79A3 10934338 YP_004695416.1 CDS Nit79A3_2234 NC_015731.1 2390974 2393073 R SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT; TIGRFAM: NAD-dependent DNA ligase; KEGG: nit:NAL212_2412 DNA ligase, NAD-dependent; HAMAP: DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; Helix-hairpin-helix motif; BRCT; DNA ligase complement(2390974..2393073) Nitrosomonas sp. Is79A3 10934339 YP_004695417.1 CDS Nit79A3_2235 NC_015731.1 2393124 2393951 D KEGG: nit:NAL212_2413 hypothetical protein; hypothetical protein 2393124..2393951 Nitrosomonas sp. Is79A3 10934340 YP_004695418.1 CDS Nit79A3_2236 NC_015731.1 2393992 2394537 D PFAM: NUDIX hydrolase domain; KEGG: nit:NAL212_2414 NUDIX hydrolase; NUDIX hydrolase 2393992..2394537 Nitrosomonas sp. Is79A3 10934341 YP_004695419.1 CDS Nit79A3_2237 NC_015731.1 2394587 2395744 D PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal; KEGG: nit:NAL212_2325 beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 2394587..2395744 Nitrosomonas sp. Is79A3 10934342 YP_004695420.1 CDS Nit79A3_2238 NC_015731.1 2395775 2396647 D PFAM: Aminotransferase, class IV; KEGG: nit:NAL212_2326 D-amino-acid transaminase; class IV aminotransferase 2395775..2396647 Nitrosomonas sp. Is79A3 10934343 YP_004695421.1 CDS Nit79A3_2239 NC_015731.1 2396689 2396955 D KEGG: nit:NAL212_2327 hypothetical protein; HAMAP: Protein of unknown function DUF493; PFAM: Protein of unknown function DUF493; hypothetical protein 2396689..2396955 Nitrosomonas sp. Is79A3 10934344 YP_004695422.1 CDS Nit79A3_2240 NC_015731.1 2396952 2397632 D TIGRFAM: Octanoyltransferase; HAMAP: Octanoyltransferase; KEGG: nit:NAL212_2328 lipoate-protein ligase B; PFAM: Biotin/lipoate A/B protein ligase; Octanoyltransferase 2396952..2397632 Nitrosomonas sp. Is79A3 10934345 YP_004695423.1 CDS Nit79A3_2241 NC_015731.1 2397622 2398566 D SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Lipoate synthase; KEGG: nit:NAL212_2329 lipoic acid synthetase; HAMAP: Lipoate synthase; PFAM: Radical SAM; Lipoyl synthase 2397622..2398566 Nitrosomonas sp. Is79A3 10934346 YP_004695424.1 CDS Nit79A3_2242 NC_015731.1 2398862 2399233 D hypothetical protein 2398862..2399233 Nitrosomonas sp. Is79A3 10934347 YP_004695425.1 CDS Nit79A3_2243 NC_015731.1 2399452 2399868 R PFAM: Peroxiredoxin, OsmC-like protein; KEGG: nit:NAL212_2330 OsmC family protein; OsmC family protein complement(2399452..2399868) Nitrosomonas sp. Is79A3 10934348 YP_004695426.1 CDS Nit79A3_2244 NC_015731.1 2399972 2400283 R PFAM: Cytochrome c, class I; KEGG: nit:NAL212_2331 cytochrome c class I; cytochrome c class I complement(2399972..2400283) Nitrosomonas sp. Is79A3 10934349 YP_004695427.1 CDS Nit79A3_2245 NC_015731.1 2400526 2402199 R TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: nit:NAL212_2332 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; Dihydroxy-acid dehydratase complement(2400526..2402199) Nitrosomonas sp. Is79A3 10934350 YP_004695428.1 CDS Nit79A3_2246 NC_015731.1 2402306 2403127 D TIGRFAM: Prolipoprotein diacylglyceryl transferase; HAMAP: Prolipoprotein diacylglyceryl transferase; KEGG: nit:NAL212_2333 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 2402306..2403127 Nitrosomonas sp. Is79A3 10934351 YP_004695429.1 CDS Nit79A3_2247 NC_015731.1 2403207 2403356 R hypothetical protein complement(2403207..2403356) Nitrosomonas sp. Is79A3 10934352 YP_004695430.1 CDS Nit79A3_2248 NC_015731.1 2403576 2403959 D KEGG: nit:NAL212_0469 hypothetical protein; hypothetical protein 2403576..2403959 Nitrosomonas sp. Is79A3 10934353 YP_004695431.1 CDS Nit79A3_2249 NC_015731.1 2404036 2405652 R PFAM: Transposase, IS4-like; KEGG: nit:NAL212_3145 IS5 family transposase; transposase IS4 family protein complement(2404036..2405652) Nitrosomonas sp. Is79A3 10934354 YP_004695432.1 CDS Nit79A3_2250 NC_015731.1 2406024 2407331 R TIGRFAM: Signal transduction histidine kinase, phosphate regulon sensor PhoR; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; KEGG: nit:NAL212_2335 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAS/PAC sensor signal transduction histidine kinase complement(2406024..2407331) Nitrosomonas sp. Is79A3 10934355 YP_004695433.1 CDS Nit79A3_2251 NC_015731.1 2407481 2408203 R TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein phoB; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; KEGG: nit:NAL212_2336 two component transcriptional regulator PhoB, winged helix family; SMART: Signal transduction response regulator, receiver region; two component transcriptional regulator PhoB, winged helix family complement(2407481..2408203) Nitrosomonas sp. Is79A3 10934356 YP_004695434.1 CDS Nit79A3_2252 NC_015731.1 2408298 2408708 D PFAM: Protein of unknown function DUF971; KEGG: nit:NAL212_2337 hypothetical protein; hypothetical protein 2408298..2408708 Nitrosomonas sp. Is79A3 10934357 YP_004695435.1 CDS Nit79A3_2253 NC_015731.1 2408801 2409535 D TIGRFAM: UbiE/COQ5 methyltransferase; HAMAP: UbiE/COQ5 methyltransferase; KEGG: nit:NAL212_2338 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Ubiquinone/menaquinone biosynthesis methyltransferase ubiE 2408801..2409535 Nitrosomonas sp. Is79A3 10934358 YP_004695436.1 CDS Nit79A3_2254 NC_015731.1 2410061 2412484 R KEGG: pbr:PB2503_07504 hypothetical protein; hypothetical protein complement(2410061..2412484) Nitrosomonas sp. Is79A3 10934359 YP_004695437.1 CDS Nit79A3_2255 NC_015731.1 2412484 2413929 R KEGG: app:CAP2UW1_1523 NodT family RND efflux system, outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; RND efflux system, outer membrane lipoprotein, NodT family complement(2412484..2413929) Nitrosomonas sp. Is79A3 10934360 YP_004695438.1 CDS Nit79A3_2256 NC_015731.1 2414108 2414218 R hypothetical protein complement(2414108..2414218) Nitrosomonas sp. Is79A3 10934361 YP_004695439.1 CDS Nit79A3_2257 NC_015731.1 2414394 2415656 R KEGG: gvi:gll1319 hypothetical protein; hypothetical protein complement(2414394..2415656) Nitrosomonas sp. Is79A3 10934362 YP_004695440.1 CDS Nit79A3_2258 NC_015731.1 2416038 2417117 R TIGRFAM: tRNA-specific 2-thiouridylase; HAMAP: tRNA-specific 2-thiouridylase; KEGG: nit:NAL212_2547 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like; tRNA-specific 2-thiouridylase mnmA complement(2416038..2417117) Nitrosomonas sp. Is79A3 10934363 YP_004695441.1 CDS Nit79A3_2259 NC_015731.1 2417122 2417577 R PFAM: NUDIX hydrolase domain; KEGG: nit:NAL212_2548 NUDIX hydrolase; NUDIX hydrolase complement(2417122..2417577) Nitrosomonas sp. Is79A3 10934364 YP_004695442.1 CDS Nit79A3_2260 NC_015731.1 2417715 2419517 R KEGG: mmw:Mmwyl1_1181 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor hybrid histidine kinase complement(2417715..2419517) Nitrosomonas sp. Is79A3 10934365 YP_004695443.1 CDS Nit79A3_2262 NC_015731.1 2421201 2421929 D PFAM: Transposase, mutator type; KEGG: net:Neut_2405 transposase, mutator type; transposase mutator type 2421201..2421929 Nitrosomonas sp. Is79A3 10934368 YP_004695444.1 CDS Nit79A3_2263 NC_015731.1 2421968 2422204 D hypothetical protein 2421968..2422204 Nitrosomonas sp. Is79A3 10934369 YP_004695445.1 CDS Nit79A3_2264 NC_015731.1 2422544 2424355 R KEGG: hch:HCH_04215 hypothetical protein; hypothetical protein complement(2422544..2424355) Nitrosomonas sp. Is79A3 10934370 YP_004695446.1 CDS Nit79A3_2265 NC_015731.1 2424352 2425494 R KEGG: rde:RD1_0863 hypothetical protein; hypothetical protein complement(2424352..2425494) Nitrosomonas sp. Is79A3 10934371 YP_004695447.1 CDS Nit79A3_2266 NC_015731.1 2425960 2427273 R PFAM: Transposase, IS4-like; KEGG: gur:Gura_1234 hypothetical protein; transposase IS4 family protein complement(2425960..2427273) Nitrosomonas sp. Is79A3 10934372 YP_004695448.1 CDS Nit79A3_2267 NC_015731.1 2427765 2428526 D KEGG: aex:Astex_1811 hypothetical protein; hypothetical protein 2427765..2428526 Nitrosomonas sp. Is79A3 10934373 YP_004695449.1 CDS Nit79A3_2268 NC_015731.1 2428523 2429392 D PFAM: Protein of unknown function DUF900, hydrolase-like; KEGG: aex:Astex_1810 hypothetical protein; hypothetical protein 2428523..2429392 Nitrosomonas sp. Is79A3 10934374 YP_004695450.1 CDS Nit79A3_2270 NC_015731.1 2429929 2430942 D KEGG: rpe:RPE_4585 hypothetical protein; hypothetical protein 2429929..2430942 Nitrosomonas sp. Is79A3 10934376 YP_004695451.1 CDS Nit79A3_2271 NC_015731.1 2431139 2431426 D KEGG: dac:Daci_3140 hypothetical protein; hypothetical protein 2431139..2431426 Nitrosomonas sp. Is79A3 10934377 YP_004695452.1 CDS Nit79A3_2272 NC_015731.1 2431426 2431833 D KEGG: dac:Daci_3141 hypothetical protein; hypothetical protein 2431426..2431833 Nitrosomonas sp. Is79A3 10934378 YP_004695453.1 CDS Nit79A3_2273 NC_015731.1 2431936 2433315 R PFAM: SEC-C motif; KEGG: app:CAP2UW1_3119 sec-C motif domain-containing protein; SEC-C motif domain-containing protein complement(2431936..2433315) Nitrosomonas sp. Is79A3 10934379 YP_004695454.1 CDS Nit79A3_2274 NC_015731.1 2433548 2434510 D PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 2433548..2434510 Nitrosomonas sp. Is79A3 10934380 YP_004695455.1 CDS Nit79A3_2276 NC_015731.1 2436579 2437544 R KEGG: nit:NAL212_2546 magnesium and cobalt transport protein CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; magnesium and cobalt transport protein CorA complement(2436579..2437544) Nitrosomonas sp. Is79A3 10934382 YP_004695456.1 CDS Nit79A3_2277 NC_015731.1 2437775 2438098 D PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein 2437775..2438098 Nitrosomonas sp. Is79A3 10934383 YP_004695457.1 CDS Nit79A3_2278 NC_015731.1 2438095 2439003 D KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 2438095..2439003 Nitrosomonas sp. Is79A3 10934384 YP_004695458.1 CDS Nit79A3_2279 NC_015731.1 2439071 2439169 D hypothetical protein 2439071..2439169 Nitrosomonas sp. Is79A3 10934385 YP_004695459.1 CDS Nit79A3_2280 NC_015731.1 2439599 2440177 D PFAM: Haemolysin-type calcium-binding region; KEGG: nit:NAL212_1895 5'-nucleotidase; Hemolysin-type calcium-binding protein 2439599..2440177 Nitrosomonas sp. Is79A3 10934386 YP_004695460.1 CDS Nit79A3_2281 NC_015731.1 2440407 2440733 D KEGG: nit:NAL212_2023 hypothetical protein; hypothetical protein 2440407..2440733 Nitrosomonas sp. Is79A3 10934387 YP_004695461.1 CDS Nit79A3_2282 NC_015731.1 2440938 2442782 D PFAM: Uncharacterised protein family UPF0118; KEGG: nit:NAL212_2698 hypothetical protein; hypothetical protein 2440938..2442782 Nitrosomonas sp. Is79A3 10934388 YP_004695462.1 CDS Nit79A3_2284 NC_015731.1 2444793 2445755 D PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 2444793..2445755 Nitrosomonas sp. Is79A3 10934390 YP_004695463.1 CDS Nit79A3_2286 NC_015731.1 2446237 2448024 R KEGG: mgm:Mmc1_3076 hypothetical protein; hypothetical protein complement(2446237..2448024) Nitrosomonas sp. Is79A3 10934392 YP_004695464.1 CDS Nit79A3_2287 NC_015731.1 2448149 2449711 R KEGG: hoh:Hoch_6445 thiol oxidoreductase-like protein; thiol oxidoreductase complement(2448149..2449711) Nitrosomonas sp. Is79A3 10934393 YP_004695465.1 CDS Nit79A3_2288 NC_015731.1 2450373 2451116 R PFAM: Integral membrane protein TerC; KEGG: nit:NAL212_2785 integral membrane protein TerC; integral membrane protein TerC complement(2450373..2451116) Nitrosomonas sp. Is79A3 10934394 YP_004695466.1 CDS Nit79A3_2289 NC_015731.1 2451390 2451860 D KEGG: nit:NAL212_2225 hypothetical protein; hypothetical protein 2451390..2451860 Nitrosomonas sp. Is79A3 10934395 YP_004695467.1 CDS Nit79A3_2290 NC_015731.1 2451989 2452981 R KEGG: nit:NAL212_1763 ribonuclease BN; TIGRFAM: Ribonuclease BN; PFAM: Ribonuclease BN-related; ribonuclease BN complement(2451989..2452981) Nitrosomonas sp. Is79A3 10934396 YP_004695468.1 CDS Nit79A3_2291 NC_015731.1 2453234 2453617 D KEGG: nit:NAL212_0931 hypothetical protein; hypothetical protein 2453234..2453617 Nitrosomonas sp. Is79A3 10934397 YP_004695469.1 CDS Nit79A3_2292 NC_015731.1 2453795 2454265 R KEGG: nit:NAL212_1490 hypothetical protein; hypothetical protein complement(2453795..2454265) Nitrosomonas sp. Is79A3 10934398 YP_004695470.1 CDS Nit79A3_2294 NC_015731.1 2454649 2455557 R KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit complement(2454649..2455557) Nitrosomonas sp. Is79A3 10934399 YP_004695471.1 CDS Nit79A3_2295 NC_015731.1 2455554 2455877 R PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein complement(2455554..2455877) Nitrosomonas sp. Is79A3 10934400 YP_004695472.1 CDS Nit79A3_2296 NC_015731.1 2457213 2458175 R PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein complement(2457213..2458175) Nitrosomonas sp. Is79A3 10934401 YP_004695473.1 CDS Nit79A3_2298 NC_015731.1 2458963 2460255 R PFAM: DNA-repair protein, UmuC-like; KEGG: nit:NAL212_2528 DNA-directed DNA polymerase; UMUC domain-containing protein DNA-repair protein complement(2458963..2460255) Nitrosomonas sp. Is79A3 10934403 YP_004695474.1 CDS Nit79A3_2299 NC_015731.1 2460248 2461639 R TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; KEGG: nit:NAL212_2527 DNA polymerase III, epsilon subunit; SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; DNA polymerase III subunit epsilon complement(2460248..2461639) Nitrosomonas sp. Is79A3 10934404 YP_004695475.1 CDS Nit79A3_2300 NC_015731.1 2461636 2462241 R PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: nit:NAL212_2526 peptidase S24/S26A/S26B, conserved region; peptidase S24/S26A/S26B complement(2461636..2462241) Nitrosomonas sp. Is79A3 10934405 YP_004695476.1 CDS Nit79A3_2301 NC_015731.1 2462293 2462520 R KEGG: msm:MSMEG_5583 HNH endonuclease; hypothetical protein complement(2462293..2462520) Nitrosomonas sp. Is79A3 10934406 YP_004695477.1 CDS Nit79A3_2305 NC_015731.1 2463458 2464624 R PFAM: Transposase, IS4-like; KEGG: dar:Daro_2223 transposase IS4; transposase IS4 family protein complement(2463458..2464624) Nitrosomonas sp. Is79A3 10934410 YP_004695478.1 CDS Nit79A3_2306 NC_015731.1 2464706 2464885 R hypothetical protein complement(2464706..2464885) Nitrosomonas sp. Is79A3 10934411 YP_004695479.1 CDS Nit79A3_2307 NC_015731.1 2464912 2466858 R PFAM: AsmA; KEGG: nit:NAL212_2018 AsmA family protein; AsmA family protein complement(2464912..2466858) Nitrosomonas sp. Is79A3 10934412 YP_004695480.1 CDS Nit79A3_2308 NC_015731.1 2467004 2467210 R KEGG: nit:NAL212_0955 hypothetical protein; hypothetical protein complement(2467004..2467210) Nitrosomonas sp. Is79A3 10934413 YP_004695481.1 CDS Nit79A3_2309 NC_015731.1 2467698 2468060 R KEGG: nit:NAL212_2551 hypothetical protein; hypothetical protein complement(2467698..2468060) Nitrosomonas sp. Is79A3 10934414 YP_004695482.1 CDS Nit79A3_2310 NC_015731.1 2468057 2468335 R PFAM: CsbD-like; KEGG: dar:Daro_2060 CsbD-like; CsbD family protein complement(2468057..2468335) Nitrosomonas sp. Is79A3 10934415 YP_004695483.1 CDS Nit79A3_2311 NC_015731.1 2468392 2468634 R hypothetical protein complement(2468392..2468634) Nitrosomonas sp. Is79A3 10934416 YP_004695484.1 CDS Nit79A3_2312 NC_015731.1 2468920 2469480 R PFAM: Haemerythrin/HHE cation-binding motif; KEGG: nit:NAL212_0423 hemerythrin HHE cation binding domain-containing protein; Hemerythrin HHE cation binding domain-containing protein complement(2468920..2469480) Nitrosomonas sp. Is79A3 10934417 YP_004695485.1 CDS Nit79A3_2313 NC_015731.1 2469672 2470547 R PFAM: Integrase, catalytic core; KEGG: rso:RSp0548 ISRSO8-transposase orfB protein; Integrase catalytic subunit complement(2469672..2470547) Nitrosomonas sp. Is79A3 10934418 YP_004695486.1 CDS Nit79A3_2315 NC_015731.1 2471388 2472518 D KEGG: hoh:Hoch_1738 hypothetical protein; hypothetical protein 2471388..2472518 Nitrosomonas sp. Is79A3 10934420 YP_004695487.1 CDS Nit79A3_2316 NC_015731.1 2472766 2472990 D hypothetical protein 2472766..2472990 Nitrosomonas sp. Is79A3 10934421 YP_004695488.1 CDS Nit79A3_2317 NC_015731.1 2473235 2473381 R KEGG: dar:Daro_2699 hypothetical protein; hypothetical protein complement(2473235..2473381) Nitrosomonas sp. Is79A3 10934422 YP_004695489.1 CDS Nit79A3_2318 NC_015731.1 2474490 2475761 D PFAM: Integrase, catalytic core, phage; KEGG: lpf:lpl0065 hypothetical protein; integrase 2474490..2475761 Nitrosomonas sp. Is79A3 10934423 YP_004695490.1 CDS Nit79A3_2319 NC_015731.1 2475786 2476052 D PFAM: Plasmid stabilisation system; KEGG: nit:NAL212_0367 plasmid stabilization system; plasmid stabilization system 2475786..2476052 Nitrosomonas sp. Is79A3 10934424 YP_004695491.1 CDS Nit79A3_2320 NC_015731.1 2476049 2476381 D PFAM: Helix-turn-helix type 3; KEGG: nit:NAL212_0368 helix-turn-helix domain-containing protein; helix-turn-helix domain-containing protein 2476049..2476381 Nitrosomonas sp. Is79A3 10934425 YP_004695492.1 CDS Nit79A3_2321 NC_015731.1 2476407 2477105 D KEGG: YecA family protein; TIGRFAM: YgfB/YecA protein; PFAM: SEC-C motif; hypothetical protein 2476407..2477105 Nitrosomonas sp. Is79A3 10934426 YP_004695493.1 CDS Nit79A3_2322 NC_015731.1 2477236 2477475 R hypothetical protein complement(2477236..2477475) Nitrosomonas sp. Is79A3 10934427 YP_004695494.1 CDS Nit79A3_2323 NC_015731.1 2477764 2478438 D KEGG: nit:NAL212_0371 hypothetical protein; hypothetical protein 2477764..2478438 Nitrosomonas sp. Is79A3 10934428 YP_004695495.1 CDS Nit79A3_2324 NC_015731.1 2478624 2478818 D KEGG: nit:NAL212_0372 hypothetical protein; hypothetical protein 2478624..2478818 Nitrosomonas sp. Is79A3 10934429 YP_004695496.1 CDS Nit79A3_2325 NC_015731.1 2478827 2480521 D PFAM: Replication endonuclease, probable, phage; KEGG: nit:NAL212_0373 replication protein A; replication gene A 2478827..2480521 Nitrosomonas sp. Is79A3 10934430 YP_004695497.1 CDS Nit79A3_2326 NC_015731.1 2480524 2482404 R hypothetical protein complement(2480524..2482404) Nitrosomonas sp. Is79A3 10934431 YP_004695498.1 CDS Nit79A3_2327 NC_015731.1 2482769 2482993 R hypothetical protein complement(2482769..2482993) Nitrosomonas sp. Is79A3 10934432 YP_004695499.1 CDS Nit79A3_2328 NC_015731.1 2483888 2485144 R PFAM: Integrase, catalytic core, phage; KEGG: dar:Daro_1675 phage integrase; integrase complement(2483888..2485144) Nitrosomonas sp. Is79A3 10934433 YP_004695500.1 CDS Nit79A3_2329 NC_015731.1 2485350 2485802 R TIGRFAM: PAS; PFAM: PAS fold; KEGG: nit:NAL212_2384 PAS sensor protein; SMART: PAC motif; PAS; PAS sensor protein complement(2485350..2485802) Nitrosomonas sp. Is79A3 10934434 YP_004695501.1 CDS Nit79A3_2330 NC_015731.1 2485864 2486343 R KEGG: nit:NAL212_2385 polyketide cyclase/dehydrase; polyketide cyclase/dehydrase complement(2485864..2486343) Nitrosomonas sp. Is79A3 10934435 YP_004695502.1 CDS Nit79A3_2331 NC_015731.1 2486372 2487535 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nit:NAL212_2386 FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2486372..2487535) Nitrosomonas sp. Is79A3 10934436 YP_004695503.1 CDS Nit79A3_2332 NC_015731.1 2487729 2488622 R TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase; HAMAP: Glutamyl-Q tRNA(Asp) synthetase; KEGG: nit:NAL212_2387 glutamyl-Q tRNA(Asp) synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl-Q tRNA(Asp) synthetase complement(2487729..2488622) Nitrosomonas sp. Is79A3 10934437 YP_004695504.1 CDS Nit79A3_2333 NC_015731.1 2488807 2490195 D KEGG: nit:NAL212_2390 UDP-N-acetylmuramate; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; UDP-N-acetylmuramate:l-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 2488807..2490195 Nitrosomonas sp. Is79A3 10934438 YP_004695505.1 CDS Nit79A3_2334 NC_015731.1 2490231 2490758 R TIGRFAM: Adenine phosphoribosyl transferase; HAMAP: Adenine phosphoribosyl transferase; KEGG: nit:NAL212_2391 adenine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; adenine phosphoribosyltransferase complement(2490231..2490758) Nitrosomonas sp. Is79A3 10934439 YP_004695506.1 CDS Nit79A3_2335 NC_015731.1 2490885 2491982 R KEGG: nit:NAL212_2392 nitrite reductase, copper-containing; TIGRFAM: Nitrite reductase, copper containing; PFAM: Multicopper oxidase, type 1; Multicopper oxidase, type 3; nitrite reductase, copper-containing complement(2490885..2491982) Nitrosomonas sp. Is79A3 10934440 YP_004695507.1 CDS Nit79A3_2336 NC_015731.1 2492230 2494212 R KEGG: tbd:Tbd_0539 antiporter-2, CPA2 family monovalent cation/proton antiporter; TIGRFAM: K+/H+ exchanger; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; potassium efflux system protein complement(2492230..2494212) Nitrosomonas sp. Is79A3 10934441 YP_004695508.1 CDS Nit79A3_2337 NC_015731.1 2494331 2495629 D KEGG: nit:NAL212_2393 glutamate/cysteine ligase; TIGRFAM: Glutamate--cysteine ligase GshA; PFAM: Glutamate--cysteine ligase GshA; glutamate/cysteine ligase 2494331..2495629 Nitrosomonas sp. Is79A3 10934442 YP_004695509.1 CDS Nit79A3_2338 NC_015731.1 2495637 2496584 D TIGRFAM: Glutathione synthetase, prokaryotic; HAMAP: Glutathione synthetase, prokaryotic; KEGG: nit:NAL212_2394 glutathione synthetase; PFAM: Prokaryotic glutathione synthetase, ATP-binding; Prokaryotic glutathione synthetase, N-terminal; Glutathione synthetase 2495637..2496584 Nitrosomonas sp. Is79A3 10934443 YP_004695510.1 CDS Nit79A3_2339 NC_015731.1 2496633 2498462 R TIGRFAM: Peptidase M41, FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; KEGG: nit:NAL212_2396 ATP-dependent metalloprotease FtsH; SMART: ATPase, AAA+ type, core; ATP-dependent metalloprotease FtsH complement(2496633..2498462) Nitrosomonas sp. Is79A3 10934444 YP_004695511.1 CDS Nit79A3_2340 NC_015731.1 2498603 2499886 R PFAM: Membrane protein, aromatic hydrocarbon degradation; KEGG: nit:NAL212_2397 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein complement(2498603..2499886) Nitrosomonas sp. Is79A3 10934445 YP_004695512.1 CDS Nit79A3_2341 NC_015731.1 2500285 2502825 D TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: nit:NAL212_2398 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2500285..2502825 Nitrosomonas sp. Is79A3 10934446 YP_004695513.1 CDS Nit79A3_2342 NC_015731.1 2502815 2502964 D hypothetical protein 2502815..2502964 Nitrosomonas sp. Is79A3 10934447 YP_004695514.1 CDS Nit79A3_2343 NC_015731.1 2503122 2504069 D SMART: LamG-like jellyroll fold; KEGG: glo:Glov_2915 cell wall/surface repeat protein; LamG domain-containing protein jellyroll fold domain-containing protein 2503122..2504069 Nitrosomonas sp. Is79A3 10934448 YP_004695515.1 CDS Nit79A3_2344 NC_015731.1 2504419 2505588 R PFAM: Aminotransferase, class I/II; KEGG: nit:NAL212_2291 cystathionine beta-lyase; class I and II aminotransferase complement(2504419..2505588) Nitrosomonas sp. Is79A3 10934449 YP_004695516.1 CDS Nit79A3_2345 NC_015731.1 2505585 2507789 R PFAM: Sulphatase-modifying factor; Methyltransferase type 12; KEGG: nit:NAL212_2290 sulfatase-modifying factor protein; sulfatase-modifying factor protein complement(2505585..2507789) Nitrosomonas sp. Is79A3 10934450 YP_004695517.1 CDS Nit79A3_2346 NC_015731.1 2507829 2508518 D PFAM: Protein of unknown function DUF2064; KEGG: nit:NAL212_2036 hypothetical protein; hypothetical protein 2507829..2508518 Nitrosomonas sp. Is79A3 10934451 YP_004695518.1 CDS Nit79A3_2347 NC_015731.1 2508511 2509200 D PFAM: Glycosyl transferase, family 2; KEGG: nit:NAL212_2035 glycosyl transferase 2; glycosyl transferase 2 2508511..2509200 Nitrosomonas sp. Is79A3 10934452 YP_004695519.1 CDS Nit79A3_2348 NC_015731.1 2509240 2510286 D PFAM: Methyltransferase type 11; KEGG: nit:NAL212_2034 arsenite methyltransferase; type 11 methyltransferase 2509240..2510286 Nitrosomonas sp. Is79A3 10934453 YP_004695520.1 CDS Nit79A3_2349 NC_015731.1 2510289 2511242 D PFAM: Radical SAM; KEGG: nit:NAL212_2033 radical SAM domain-containing protein; Radical SAM domain-containing protein 2510289..2511242 Nitrosomonas sp. Is79A3 10934454 YP_004695521.1 CDS Nit79A3_2350 NC_015731.1 2511245 2513395 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SNARE associated Golgi protein; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; KEGG: nit:NAL212_1630 dihydrolipoyl dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2511245..2513395 Nitrosomonas sp. Is79A3 10934455 YP_004695522.1 CDS Nit79A3_2351 NC_015731.1 2513358 2513648 D hypothetical protein 2513358..2513648 Nitrosomonas sp. Is79A3 10934456 YP_004695523.1 CDS Nit79A3_2352 NC_015731.1 2513640 2516951 R PFAM: Metallophosphoesterase; KEGG: pph:Ppha_1047 signal transduction protein with NACHT domain; metallophosphoesterase complement(2513640..2516951) Nitrosomonas sp. Is79A3 10934457 YP_004695524.1 CDS Nit79A3_2353 NC_015731.1 2517220 2517420 R PFAM: YcfA-like; KEGG: cyc:PCC7424_4650 YcfA family protein; hypothetical protein complement(2517220..2517420) Nitrosomonas sp. Is79A3 10934458 YP_004695525.1 CDS Nit79A3_2354 NC_015731.1 2517413 2517619 R PFAM: Uncharacterised protein family UPF0150; KEGG: neu:NE1268 hypothetical protein; hypothetical protein complement(2517413..2517619) Nitrosomonas sp. Is79A3 10934459 YP_004695526.1 CDS Nit79A3_2355 NC_015731.1 2517824 2518408 D PFAM: AMP-dependent synthetase/ligase; KEGG: dps:DP1202 acyl-CoA synthetase; AMP-dependent synthetase/ligase 2517824..2518408 Nitrosomonas sp. Is79A3 10934460 YP_004695527.1 CDS Nit79A3_2356 NC_015731.1 2518585 2519052 R KEGG: nit:NAL212_3095 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein; bacterioferritin complement(2518585..2519052) Nitrosomonas sp. Is79A3 10934461 YP_004695528.1 CDS Nit79A3_2357 NC_015731.1 2519258 2520481 R PFAM: Aminotransferase, class I/II; KEGG: sat:SYN_00565 2-amino-3-ketobutyrate coenzyme A ligase; class I and II aminotransferase complement(2519258..2520481) Nitrosomonas sp. Is79A3 10934462 YP_004695529.1 CDS Nit79A3_2358 NC_015731.1 2520494 2521450 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: sat:SYN_00564 L-threonine 3-dehydrogenase; NAD-dependent epimerase/dehydratase complement(2520494..2521450) Nitrosomonas sp. Is79A3 10934463 YP_004695530.1 CDS Nit79A3_2359 NC_015731.1 2521815 2522177 D KEGG: nit:NAL212_2722 hypothetical protein; hypothetical protein 2521815..2522177 Nitrosomonas sp. Is79A3 10934464 YP_004695531.1 CDS Nit79A3_2360 NC_015731.1 2522425 2523045 D KEGG: azl:AZL_d03580 glycoside hydrolase; PFAM: Glycoside hydrolase, family 25; SMART: Glycoside hydrolase, family 25 subgroup; glycoside hydrolase 25 2522425..2523045 Nitrosomonas sp. Is79A3 10934465 YP_004695532.1 CDS Nit79A3_2361 NC_015731.1 2523125 2523487 R KEGG: net:Neut_0707 transcriptional regulator, LysR family protein; hypothetical protein complement(2523125..2523487) Nitrosomonas sp. Is79A3 10934466 YP_004695533.1 CDS Nit79A3_2362 NC_015731.1 2523956 2524138 R KEGG: nit:NAL212_1979 hypothetical protein; hypothetical protein complement(2523956..2524138) Nitrosomonas sp. Is79A3 10934467 YP_004695534.1 CDS Nit79A3_2363 NC_015731.1 2524261 2526060 R TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: nit:NAL212_1980 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; ATP-dependent DNA helicase RecQ complement(2524261..2526060) Nitrosomonas sp. Is79A3 10934468 YP_004695535.1 CDS Nit79A3_2364 NC_015731.1 2526072 2526311 R hypothetical protein complement(2526072..2526311) Nitrosomonas sp. Is79A3 10934469 YP_004695536.1 CDS Nit79A3_2365 NC_015731.1 2526388 2527797 D KEGG: nit:NAL212_1981 glutamine synthetase, type I; TIGRFAM: Glutamine synthetase type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp; glutamine synthetase, type I 2526388..2527797 Nitrosomonas sp. Is79A3 10934470 YP_004695537.1 CDS Nit79A3_2366 NC_015731.1 2528169 2528597 D KEGG: nit:NAL212_1982 hypothetical protein; hypothetical protein 2528169..2528597 Nitrosomonas sp. Is79A3 10934471 YP_004695538.1 CDS Nit79A3_2367 NC_015731.1 2528635 2529084 D KEGG: nit:NAL212_1983 hypothetical protein; hypothetical protein 2528635..2529084 Nitrosomonas sp. Is79A3 10934472 YP_004695539.1 CDS Nit79A3_2368 NC_015731.1 2529258 2530031 R KEGG: nit:NAL212_1984 exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III complement(2529258..2530031) Nitrosomonas sp. Is79A3 10934473 YP_004695540.1 CDS Nit79A3_2369 NC_015731.1 2530117 2530275 R KEGG: mgm:Mmc1_3076 hypothetical protein; hypothetical protein complement(2530117..2530275) Nitrosomonas sp. Is79A3 10934474 YP_004695541.1 CDS Nit79A3_2370 NC_015731.1 2530347 2532281 R SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal; KEGG: nit:NAL212_1985 DEAD/DEAH box helicase domain-containing protein; helicase c2 complement(2530347..2532281) Nitrosomonas sp. Is79A3 10934475 YP_004695542.1 CDS Nit79A3_2371 NC_015731.1 2532534 2532836 R KEGG: nit:NAL212_1986 hypothetical protein; HAMAP: Protein rnfH; PFAM: Uncharacterised protein family UPF0125; Protein rnfH complement(2532534..2532836) Nitrosomonas sp. Is79A3 10934476 YP_004695543.1 CDS Nit79A3_2372 NC_015731.1 2532833 2533270 R PFAM: Streptomyces cyclase/dehydrase; KEGG: nit:NAL212_1987 cyclase/dehydrase; cyclase complement(2532833..2533270) Nitrosomonas sp. Is79A3 10934477 YP_004695544.1 CDS Nit79A3_2373 NC_015731.1 2533361 2533804 D TIGRFAM: SsrA-binding protein; HAMAP: SsrA-binding protein; KEGG: nit:NAL212_1988 SsrA-binding protein; PFAM: SsrA-binding protein; SsrA-binding protein 2533361..2533804 Nitrosomonas sp. Is79A3 10934478 YP_004695545.1 CDS Nit79A3_2374 NC_015731.1 2533865 2534878 D KEGG: nit:NAL212_1989 heme A synthase; HAMAP: Heme A synthase; PFAM: Cytochrome oxidase assembly; Heme A synthase 2533865..2534878 Nitrosomonas sp. Is79A3 10934479 YP_004695546.1 CDS Nit79A3_2375 NC_015731.1 2534969 2536384 R KEGG: nit:NAL212_2313 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; Fis family transcriptional regulator complement(2534969..2536384) Nitrosomonas sp. Is79A3 10934480 YP_004695547.1 CDS Nit79A3_2376 NC_015731.1 2536375 2538021 R KEGG: nit:NAL212_2312 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase complement(2536375..2538021) Nitrosomonas sp. Is79A3 10934481 YP_004695548.1 CDS Nit79A3_2377 NC_015731.1 2538032 2538292 R KEGG: nit:NAL212_2311 hypothetical protein; hypothetical protein complement(2538032..2538292) Nitrosomonas sp. Is79A3 10934482 YP_004695549.1 CDS Nit79A3_2378 NC_015731.1 2538736 2539704 R KEGG: nit:NAL212_1045 trans-hexaprenyltranstransferase; manually curated; PFAM: Polyprenyl synthetase; polyprenyl synthetase complement(2538736..2539704) Nitrosomonas sp. Is79A3 10934483 YP_004695550.1 CDS Nit79A3_2379 NC_015731.1 2539852 2540163 D TIGRFAM: Ribosomal protein L21; HAMAP: Ribosomal protein L21; KEGG: nit:NAL212_1044 50S ribosomal protein L21; PFAM: Ribosomal protein L21; 50S ribosomal protein L21 2539852..2540163 Nitrosomonas sp. Is79A3 10934484 YP_004695551.1 CDS Nit79A3_2380 NC_015731.1 2540174 2540431 D TIGRFAM: Ribosomal protein L27; HAMAP: Ribosomal protein L27; KEGG: nit:NAL212_1043 50S ribosomal protein L27; PFAM: Ribosomal protein L27; 50S ribosomal protein L27 2540174..2540431 Nitrosomonas sp. Is79A3 10934485 YP_004695552.1 CDS Nit79A3_2381 NC_015731.1 2540536 2541597 D TIGRFAM: GTP-binding protein Obg/CgtA; HAMAP: GTPase obg; KEGG: nit:NAL212_1042 GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; GTPase obg 2540536..2541597 Nitrosomonas sp. Is79A3 10934486 YP_004695553.1 CDS Nit79A3_2382 NC_015731.1 2541594 2542703 D SMART: Pseudouridine synthase/archaeosine transglycosylase; TIGRFAM: Glutamate 5-kinase, ProB-related; KEGG: nit:NAL212_1041 glutamate 5-kinase; HAMAP: Glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; Glutamate 5-kinase 2541594..2542703 Nitrosomonas sp. Is79A3 10934487 YP_004695554.1 CDS Nit79A3_2383 NC_015731.1 2542769 2543881 D KEGG: nit:NAL212_1040 hypothetical protein; hypothetical protein 2542769..2543881 Nitrosomonas sp. Is79A3 10934488 YP_004695555.1 CDS Nit79A3_2384 NC_015731.1 2543941 2545983 D PFAM: NAD+ synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rrs:RoseRS_2679 NAD synthetase; NAD synthetase 2543941..2545983 Nitrosomonas sp. Is79A3 10934489 YP_004695556.1 CDS Nit79A3_2385 NC_015731.1 2546061 2546987 R KEGG: pbs:Plabr_1147 hypothetical protein; hypothetical protein complement(2546061..2546987) Nitrosomonas sp. Is79A3 10934490 YP_004695557.1 CDS Nit79A3_2386 NC_015731.1 2547196 2548242 R hypothetical protein complement(2547196..2548242) Nitrosomonas sp. Is79A3 10934491 YP_004695558.1 CDS Nit79A3_2387 NC_015731.1 2548351 2548536 R PFAM: Protein of unknown function DUF2130; KEGG: rfr:Rfer_0075 hypothetical protein; hypothetical protein complement(2548351..2548536) Nitrosomonas sp. Is79A3 10934492 YP_004695559.1 CDS Nit79A3_2388 NC_015731.1 2549072 2549434 D KEGG: nit:NAL212_2030 hypothetical protein; hypothetical protein 2549072..2549434 Nitrosomonas sp. Is79A3 10934493 YP_004695560.1 CDS Nit79A3_2389 NC_015731.1 2549526 2551958 R hypothetical protein complement(2549526..2551958) Nitrosomonas sp. Is79A3 10934494 YP_004695561.1 CDS Nit79A3_2390 NC_015731.1 2551961 2552275 R hypothetical protein complement(2551961..2552275) Nitrosomonas sp. Is79A3 10934495 YP_004695562.1 CDS Nit79A3_2391 NC_015731.1 2552337 2552855 R hypothetical protein complement(2552337..2552855) Nitrosomonas sp. Is79A3 10934496 YP_004695563.1 CDS Nit79A3_2392 NC_015731.1 2552895 2553218 R KEGG: net:Neut_1453 hypothetical protein; hypothetical protein complement(2552895..2553218) Nitrosomonas sp. Is79A3 10934497 YP_004695564.1 CDS Nit79A3_2393 NC_015731.1 2553235 2553531 R hypothetical protein complement(2553235..2553531) Nitrosomonas sp. Is79A3 10934498 YP_004695565.1 CDS Nit79A3_2394 NC_015731.1 2553595 2554152 R KEGG: bge:BC1002_6565 hypothetical protein; hypothetical protein complement(2553595..2554152) Nitrosomonas sp. Is79A3 10934499 YP_004695566.1 CDS Nit79A3_2395 NC_015731.1 2554154 2555872 R KEGG: bcm:Bcenmc03_6476 YadA domain-containing protein; hypothetical protein complement(2554154..2555872) Nitrosomonas sp. Is79A3 10934500 YP_004695567.1 CDS Nit79A3_2396 NC_015731.1 2555876 2556814 R KEGG: bav:BAV1474 phage protein; hypothetical protein complement(2555876..2556814) Nitrosomonas sp. Is79A3 10934501 YP_004695568.1 CDS Nit79A3_2397 NC_015731.1 2556811 2560398 R PFAM: Phage tail tape measure protein TP901, core region; KEGG: mms:mma_2719 tail length tape measure protein; tail tape measure protein TP901 core region complement(2556811..2560398) Nitrosomonas sp. Is79A3 10934502 YP_004695569.1 CDS Nit79A3_2398 NC_015731.1 2560398 2560751 R PFAM: Protein of unknown function DUF1799, phage-related; KEGG: hypothetical protein; hypothetical protein complement(2560398..2560751) Nitrosomonas sp. Is79A3 10934503 YP_004695570.1 CDS Nit79A3_2399 NC_015731.1 2560769 2561095 R PFAM: Protein of unknown function DUF1789; hypothetical protein complement(2560769..2561095) Nitrosomonas sp. Is79A3 10934504 YP_004695571.1 CDS Nit79A3_2400 NC_015731.1 2561151 2562083 R KEGG: bpy:Bphyt_1177 hypothetical protein; hypothetical protein complement(2561151..2562083) Nitrosomonas sp. Is79A3 10934505 YP_004695572.1 CDS Nit79A3_2401 NC_015731.1 2562096 2562440 R hypothetical protein complement(2562096..2562440) Nitrosomonas sp. Is79A3 10934506 YP_004695573.1 CDS Nit79A3_2402 NC_015731.1 2562455 2562937 R TIGRFAM: Phage protein, HK97, gp10; KEGG: bmj:BMULJ_04631 bacteriophage protein; phage protein, HK97 gp10 family complement(2562455..2562937) Nitrosomonas sp. Is79A3 10934507 YP_004695574.1 CDS Nit79A3_2403 NC_015731.1 2562927 2563274 R TIGRFAM: Conserved hypothetical protein CHP01563; KEGG: phage head-tail adaptor; phage head-tail adaptor complement(2562927..2563274) Nitrosomonas sp. Is79A3 10934508 YP_004695575.1 CDS Nit79A3_2404 NC_015731.1 2563275 2563844 R KEGG: net:Neut_1467 hypothetical protein; hypothetical protein complement(2563275..2563844) Nitrosomonas sp. Is79A3 10934509 YP_004695576.1 CDS Nit79A3_2405 NC_015731.1 2563902 2564177 R hypothetical protein complement(2563902..2564177) Nitrosomonas sp. Is79A3 10934510 YP_004695577.1 CDS Nit79A3_2406 NC_015731.1 2564191 2564406 R hypothetical protein complement(2564191..2564406) Nitrosomonas sp. Is79A3 10934511 YP_004695578.1 CDS Nit79A3_2407 NC_015731.1 2564480 2564902 R KEGG: mpt:Mpe_A0539 hypothetical protein; hypothetical protein complement(2564480..2564902) Nitrosomonas sp. Is79A3 10934512 YP_004695579.1 CDS Nit79A3_2408 NC_015731.1 2564973 2566346 R KEGG: dbr:Deba_2547 phage major capsid protein, HK97 family; TIGRFAM: Phage major capsid protein, HK97; PFAM: Phage major capsid protein, HK97; phage major capsid protein, HK97 family complement(2564973..2566346) Nitrosomonas sp. Is79A3 10934513 YP_004695580.1 CDS Nit79A3_2409 NC_015731.1 2566362 2567060 R KEGG: dvm:DvMF_1656 phage prohead protease, HK97 family; TIGRFAM: Peptidase U35, phage prohead HK97; PFAM: Peptidase U35, phage prohead HK97; phage prohead protease, HK97 family complement(2566362..2567060) Nitrosomonas sp. Is79A3 10934514 YP_004695581.1 CDS Nit79A3_2410 NC_015731.1 2567053 2568351 R KEGG: dbr:Deba_2549 phage portal protein, HK97 family; TIGRFAM: Phage portal protein, HK97; PFAM: Phage portal protein; phage portal protein, HK97 family complement(2567053..2568351) Nitrosomonas sp. Is79A3 10934515 YP_004695582.1 CDS Nit79A3_2411 NC_015731.1 2568366 2570090 R PFAM: Phage Terminase; KEGG: dbr:Deba_2550 terminase; Terminase complement(2568366..2570090) Nitrosomonas sp. Is79A3 10934516 YP_004695583.1 CDS Nit79A3_2412 NC_015731.1 2570075 2570593 R KEGG: dvu:DVU1504 terminase small subunit; TIGRFAM: Phage terminase, small subunit, , P27; PFAM: Phage terminase, small subunit, , P27; phage terminase, small subunit P27 family complement(2570075..2570593) Nitrosomonas sp. Is79A3 10934517 YP_004695584.1 CDS Nit79A3_2413 NC_015731.1 2570688 2571113 R manually curated; PFAM: HNH endonuclease; KEGG: bss:BSUW23_09635 HNH endonuclease; SMART: HNH nuclease; HNH endonuclease complement(2570688..2571113) Nitrosomonas sp. Is79A3 10934518 YP_004695585.1 CDS Nit79A3_2414 NC_015731.1 2571237 2571662 R KEGG: net:Neut_1475 hypothetical protein; hypothetical protein complement(2571237..2571662) Nitrosomonas sp. Is79A3 10934519 YP_004695586.1 CDS Nit79A3_2415 NC_015731.1 2571676 2571882 R hypothetical protein complement(2571676..2571882) Nitrosomonas sp. Is79A3 10934520 YP_004695587.1 CDS Nit79A3_2416 NC_015731.1 2571872 2572099 R hypothetical protein complement(2571872..2572099) Nitrosomonas sp. Is79A3 10934521 YP_004695588.1 CDS Nit79A3_2417 NC_015731.1 2572381 2574750 R PFAM: Virulence-associated E; KEGG: net:Neut_1478 virulence-associated E family protein; virulence-associated E family protein complement(2572381..2574750) Nitrosomonas sp. Is79A3 10934522 YP_004695589.1 CDS Nit79A3_2418 NC_015731.1 2574754 2575134 R hypothetical protein complement(2574754..2575134) Nitrosomonas sp. Is79A3 10934523 YP_004695590.1 CDS Nit79A3_2419 NC_015731.1 2575134 2575463 R hypothetical protein complement(2575134..2575463) Nitrosomonas sp. Is79A3 10934524 YP_004695591.1 CDS Nit79A3_2420 NC_015731.1 2575465 2575569 R hypothetical protein complement(2575465..2575569) Nitrosomonas sp. Is79A3 10934525 YP_004695592.1 CDS Nit79A3_2421 NC_015731.1 2575566 2576036 R KEGG: bmj:BMULJ_04653 bacteriophage protein; hypothetical protein complement(2575566..2576036) Nitrosomonas sp. Is79A3 10934526 YP_004695593.1 CDS Nit79A3_2422 NC_015731.1 2576190 2576474 D hypothetical protein 2576190..2576474 Nitrosomonas sp. Is79A3 10934527 YP_004695594.1 CDS Nit79A3_2423 NC_015731.1 2576736 2577026 R KEGG: abm:ABSDF1321 hypothetical protein; hypothetical protein complement(2576736..2577026) Nitrosomonas sp. Is79A3 10934528 YP_004695595.1 CDS Nit79A3_2424 NC_015731.1 2577124 2577504 D KEGG: ppg:PputGB1_3443 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 2577124..2577504 Nitrosomonas sp. Is79A3 10934529 YP_004695596.1 CDS Nit79A3_2425 NC_015731.1 2577573 2577989 D KEGG: nit:NAL212_2567 nuclease (SNase domain-containing protein); PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like); nuclease 2577573..2577989 Nitrosomonas sp. Is79A3 10934530 YP_004695597.1 CDS Nit79A3_2426 NC_015731.1 2578406 2579275 D KEGG: sit:TM1040_1659 hypothetical protein; hypothetical protein 2578406..2579275 Nitrosomonas sp. Is79A3 10934531 YP_004695598.1 CDS Nit79A3_2427 NC_015731.1 2579803 2580321 R hypothetical protein complement(2579803..2580321) Nitrosomonas sp. Is79A3 10934532 YP_004695599.1 CDS Nit79A3_2428 NC_015731.1 2580387 2580659 D hypothetical protein 2580387..2580659 Nitrosomonas sp. Is79A3 10934533 YP_004695600.1 CDS Nit79A3_2429 NC_015731.1 2580951 2581250 D hypothetical protein 2580951..2581250 Nitrosomonas sp. Is79A3 10934534 YP_004695601.1 CDS Nit79A3_2430 NC_015731.1 2581312 2581653 D KEGG: rsc:RCFBP_20372 hypothetical protein; hypothetical protein 2581312..2581653 Nitrosomonas sp. Is79A3 10934535 YP_004695602.1 CDS Nit79A3_2431 NC_015731.1 2581656 2582510 D PFAM: Protein of unknown function DUF2303; KEGG: rsc:RCFBP_20373 hypothetical protein; hypothetical protein 2581656..2582510 Nitrosomonas sp. Is79A3 10934536 YP_004695603.1 CDS Nit79A3_2432 NC_015731.1 2582553 2583140 D KEGG: tkm:TK90_2683 hypothetical protein; hypothetical protein 2582553..2583140 Nitrosomonas sp. Is79A3 10934537 YP_004695604.1 CDS Nit79A3_2433 NC_015731.1 2583137 2583319 D hypothetical protein 2583137..2583319 Nitrosomonas sp. Is79A3 10934538 YP_004695605.1 CDS Nit79A3_2434 NC_015731.1 2583336 2584316 D KEGG: srt:Srot_1186 hypothetical protein; hypothetical protein 2583336..2584316 Nitrosomonas sp. Is79A3 10934539 YP_004695606.1 CDS Nit79A3_2435 NC_015731.1 2584586 2584765 D hypothetical protein 2584586..2584765 Nitrosomonas sp. Is79A3 10934540 YP_004695607.1 CDS Nit79A3_2436 NC_015731.1 2584830 2586047 D PFAM: AntA/AntB antirepressor; KEGG: ect:ECIAI39_2659 phage anti-repressor protein; AntA/AntB antirepressor domain-containing protein 2584830..2586047 Nitrosomonas sp. Is79A3 10934541 YP_004695608.1 CDS Nit79A3_2437 NC_015731.1 2586312 2586620 D hypothetical protein 2586312..2586620 Nitrosomonas sp. Is79A3 10934542 YP_004695609.1 CDS Nit79A3_2438 NC_015731.1 2586628 2586885 D hypothetical protein 2586628..2586885 Nitrosomonas sp. Is79A3 10934543 YP_004695610.1 CDS Nit79A3_2439 NC_015731.1 2586885 2587331 D KEGG: nit:NAL212_0698 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding; single-strand binding protein 2586885..2587331 Nitrosomonas sp. Is79A3 10934544 YP_004695611.1 CDS Nit79A3_2440 NC_015731.1 2587374 2587589 D hypothetical protein 2587374..2587589 Nitrosomonas sp. Is79A3 10934545 YP_004695612.1 CDS Nit79A3_2441 NC_015731.1 2587586 2588593 D PFAM: Integrase, catalytic core, phage; KEGG: meh:M301_0128 integrase; integrase 2587586..2588593 Nitrosomonas sp. Is79A3 10934546 YP_004695613.1 CDS Nit79A3_2442 NC_015731.1 2588650 2589516 R KEGG: ote:Oter_2237 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein; hypothetical protein complement(2588650..2589516) Nitrosomonas sp. Is79A3 10934547 YP_004695614.1 CDS Nit79A3_2443 NC_015731.1 2589733 2591013 R KEGG: nit:NAL212_1473 hypothetical protein; hypothetical protein complement(2589733..2591013) Nitrosomonas sp. Is79A3 10934548 YP_004695615.1 CDS Nit79A3_2444 NC_015731.1 2591239 2593473 R KEGG: kko:Kkor_1038 hypothetical protein; hypothetical protein complement(2591239..2593473) Nitrosomonas sp. Is79A3 10934549 YP_004695616.1 CDS Nit79A3_2445 NC_015731.1 2594060 2594761 D PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: nit:NAL212_1471 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 2594060..2594761 Nitrosomonas sp. Is79A3 10934550 YP_004695617.1 CDS Nit79A3_2446 NC_015731.1 2594761 2595972 D SMART: ATPase, AAA+ type, core; KEGG: nit:NAL212_1470 type II secretion system protein E; ATPase AAA 2594761..2595972 Nitrosomonas sp. Is79A3 10934551 YP_004695618.1 CDS Nit79A3_2447 NC_015731.1 2596091 2596564 R TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; KEGG: nit:NAL212_1883 PEP motif anchor domain-containing protein; PEP motif anchor domain-containing protein complement(2596091..2596564) Nitrosomonas sp. Is79A3 10934552 YP_004695619.1 CDS Nit79A3_2448 NC_015731.1 2597047 2597529 R KEGG: nit:NAL212_1947 hypothetical protein; hypothetical protein complement(2597047..2597529) Nitrosomonas sp. Is79A3 10934553 YP_004695620.1 CDS Nit79A3_2449 NC_015731.1 2597691 2597912 R KEGG: nit:NAL212_2797 hypothetical protein; hypothetical protein complement(2597691..2597912) Nitrosomonas sp. Is79A3 10934554 YP_004695621.1 CDS Nit79A3_2450 NC_015731.1 2597997 2598581 R PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: pca:Pcar_0660 cytosine/adenosine deaminase; CMP/dCMP deaminase zinc-binding protein complement(2597997..2598581) Nitrosomonas sp. Is79A3 10934555 YP_004695622.1 CDS Nit79A3_2451 NC_015731.1 2598927 2600846 D KEGG: nit:NAL212_0997 hypothetical protein; hypothetical protein 2598927..2600846 Nitrosomonas sp. Is79A3 10934556 YP_004695623.1 CDS Nit79A3_2452 NC_015731.1 2600902 2602620 D PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; KEGG: nit:NAL212_0996 sodium/hydrogen exchanger; sodium/hydrogen exchanger 2600902..2602620 Nitrosomonas sp. Is79A3 10934557 YP_004695624.1 CDS Nit79A3_2453 NC_015731.1 2602686 2602988 D KEGG: nit:NAL212_0995 hypothetical protein; hypothetical protein 2602686..2602988 Nitrosomonas sp. Is79A3 10934558 YP_004695625.1 CDS Nit79A3_2454 NC_015731.1 2602985 2603389 R KEGG: nit:NAL212_0994 hypothetical protein; hypothetical protein complement(2602985..2603389) Nitrosomonas sp. Is79A3 10934559 YP_004695626.1 CDS Nit79A3_2455 NC_015731.1 2603594 2604871 D KEGG: nit:NAL212_0993 NRAMP-family transporter; NRAMP-family transporter 2603594..2604871 Nitrosomonas sp. Is79A3 10934560 YP_004695627.1 CDS Nit79A3_2456 NC_015731.1 2604895 2606685 D KEGG: nit:NAL212_0992 xenobiotic-transporting ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; ABC transporter 2604895..2606685 Nitrosomonas sp. Is79A3 10934561 YP_004695628.1 CDS Nit79A3_2457 NC_015731.1 2606997 2607857 D TIGRFAM: flagellar motor stator protein MotA; KEGG: nit:NAL212_0991 flagellar motor stator protein MotA; flagellar motor stator protein MotA 2606997..2607857 Nitrosomonas sp. Is79A3 10934562 YP_004695629.1 CDS Nit79A3_2458 NC_015731.1 2607899 2608825 D PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: nit:NAL212_0990 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 2607899..2608825 Nitrosomonas sp. Is79A3 10934563 YP_004695630.1 CDS Nit79A3_2459 NC_015731.1 2608842 2609594 D KEGG: nit:NAL212_0989 hypothetical protein; hypothetical protein 2608842..2609594 Nitrosomonas sp. Is79A3 10934564 YP_004695631.1 CDS Nit79A3_2460 NC_015731.1 2609615 2610997 R KEGG: nit:NAL212_0988 cysteinyl-tRNA synthetase; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR; cysteinyl-tRNA synthetase complement(2609615..2610997) Nitrosomonas sp. Is79A3 10934565 YP_004695632.1 CDS Nit79A3_2461 NC_015731.1 2611146 2611739 D PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: nit:NAL212_0987 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 2611146..2611739 Nitrosomonas sp. Is79A3 10934566 YP_004695633.1 CDS Nit79A3_2462 NC_015731.1 2611769 2612260 D PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: nit:NAL212_0986 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 2611769..2612260 Nitrosomonas sp. Is79A3 10934567 YP_004695634.1 CDS Nit79A3_2463 NC_015731.1 2612325 2613500 R KEGG: nit:NAL212_0985 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; O-succinylhomoserine sulfhydrylase complement(2612325..2613500) Nitrosomonas sp. Is79A3 10934568 YP_004695635.1 CDS Nit79A3_2464 NC_015731.1 2613614 2615134 R KEGG: nit:NAL212_0984 amidophosphoribosyltransferase; TIGRFAM: Amidophosphoribosyl transferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase; amidophosphoribosyltransferase complement(2613614..2615134) Nitrosomonas sp. Is79A3 10934569 YP_004695636.1 CDS Nit79A3_2465 NC_015731.1 2615254 2615760 R PFAM: Colicin V production protein; KEGG: nit:NAL212_0983 colicin V production protein; Colicin V production protein complement(2615254..2615760) Nitrosomonas sp. Is79A3 10934570 YP_004695637.1 CDS Nit79A3_2466 NC_015731.1 2615862 2616551 R PFAM: Sporulation/cell division region, bacteria; KEGG: nit:NAL212_0982 sporulation domain-containing protein; Sporulation domain-containing protein complement(2615862..2616551) Nitrosomonas sp. Is79A3 10934571 YP_004695638.1 CDS Nit79A3_2467 NC_015731.1 2616568 2617872 R KEGG: nit:NAL212_0981 FolC bifunctional protein; TIGRFAM: Folylpolyglutamate synthetase; PFAM: Mur ligase, central; Mur ligase, C-terminal; FolC bifunctional protein complement(2616568..2617872) Nitrosomonas sp. Is79A3 10934572 YP_004695639.1 CDS Nit79A3_2468 NC_015731.1 2617931 2618800 R TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; KEGG: nit:NAL212_0980 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta complement(2617931..2618800) Nitrosomonas sp. Is79A3 10934573 YP_004695640.1 CDS Nit79A3_2469 NC_015731.1 2618837 2619700 R TIGRFAM: Tryptophan synthase, alpha chain; HAMAP: Tryptophan synthase, alpha chain; KEGG: nit:NAL212_0979 tryptophan synthase, alpha subunit; PFAM: Tryptophan synthase, alpha chain; tryptophan synthase subunit alpha complement(2618837..2619700) Nitrosomonas sp. Is79A3 10934574 YP_004695641.1 CDS Nit79A3_2470 NC_015731.1 2619766 2620965 R TIGRFAM: Tryptophan synthase, beta chain; HAMAP: Tryptophan synthase beta chain; KEGG: nit:NAL212_0978 tryptophan synthase beta chain; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; tryptophan synthase subunit beta complement(2619766..2620965) Nitrosomonas sp. Is79A3 10934575 YP_004695642.1 CDS Nit79A3_2471 NC_015731.1 2620962 2621579 R PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: nit:NAL212_0977 phosphoribosylanthranilate isomerase; N-(5'-phosphoribosyl)anthranilate isomerase complement(2620962..2621579) Nitrosomonas sp. Is79A3 10934576 YP_004695643.1 CDS Nit79A3_2472 NC_015731.1 2621605 2622402 R TIGRFAM: Pseudouridine synthase I, TruA; HAMAP: Pseudouridine synthase I, TruA; KEGG: nit:NAL212_0976 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; tRNA pseudouridine synthase A complement(2621605..2622402) Nitrosomonas sp. Is79A3 10934577 YP_004695644.1 CDS Nit79A3_2473 NC_015731.1 2622467 2624977 R TIGRFAM: Motility protein FimV, N-terminal; Motility protein FimV, C-terminal; KEGG: nit:NAL212_0975 FimV N-terminal domain; FimV N-terminal domain-containing protein complement(2622467..2624977) Nitrosomonas sp. Is79A3 10934578 YP_004695645.1 CDS Nit79A3_2474 NC_015731.1 2625279 2626391 R KEGG: nit:NAL212_0974 aspartate-semialdehyde dehydrogenase; TIGRFAM: Aspartate-semialdehyde dehydrogenase, proteobacteria; PFAM: Semialdehyde dehydrogenase, dimerisation region; Semialdehyde dehydrogenase, NAD-binding; aspartate-semialdehyde dehydrogenase complement(2625279..2626391) Nitrosomonas sp. Is79A3 10934579 YP_004695646.1 CDS Nit79A3_2475 NC_015731.1 2626550 2627611 R TIGRFAM: Isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; KEGG: nit:NAL212_0973 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase complement(2626550..2627611) Nitrosomonas sp. Is79A3 10934580 YP_004695647.1 CDS Nit79A3_2476 NC_015731.1 2627638 2628276 R TIGRFAM: 3-isopropylmalate dehydratase, small subunit region; HAMAP: 3-isopropylmalate dehydratase, small subunit region; KEGG: nit:NAL212_0972 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; 3-isopropylmalate dehydratase small subunit complement(2627638..2628276) Nitrosomonas sp. Is79A3 10934581 YP_004695648.1 CDS Nit79A3_2477 NC_015731.1 2628293 2629702 R TIGRFAM: 3-isopropylmalate dehydratase, large subunit region; HAMAP: 3-isopropylmalate dehydratase, large subunit region; KEGG: nit:NAL212_0971 3-isopropylmalate dehydratase, large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; 3-isopropylmalate dehydratase large subunit complement(2628293..2629702) Nitrosomonas sp. Is79A3 10934582 YP_004695649.1 CDS Nit79A3_2478 NC_015731.1 2629782 2630930 R PFAM: Major facilitator superfamily MFS-1; KEGG: nit:NAL212_0970 major facilitator transporter; major facilitator superfamily protein complement(2629782..2630930) Nitrosomonas sp. Is79A3 10934583 YP_004695650.1 CDS Nit79A3_2479 NC_015731.1 2631425 2631844 D PFAM: Rubrerythrin; KEGG: nit:NAL212_0969 rubrerythrin; Rubrerythrin 2631425..2631844 Nitrosomonas sp. Is79A3 10934584 YP_004695651.1 CDS Nit79A3_2480 NC_015731.1 2631959 2633947 D KEGG: nit:NAL212_0968 hypothetical protein; hypothetical protein 2631959..2633947 Nitrosomonas sp. Is79A3 10934585 YP_004695652.1 CDS Nit79A3_2481 NC_015731.1 2633944 2634453 D PFAM: Protein of unknown function CNP1-like; KEGG: nit:NAL212_0967 hypothetical protein; hypothetical protein 2633944..2634453 Nitrosomonas sp. Is79A3 10934586 YP_004695653.1 CDS Nit79A3_2482 NC_015731.1 2634549 2644187 R KEGG: PA14 domain-containing protein; hypothetical protein complement(2634549..2644187) Nitrosomonas sp. Is79A3 10934587 YP_004695654.1 CDS Nit79A3_2483 NC_015731.1 2644582 2644836 D KEGG: tkm:TK90_1567 transcriptional regulator, AbrB family; TIGRFAM: Transcription regulator AbrB; PFAM: Transcription regulator AbrB/SpoV, predicted; AbrB family transcriptional regulator 2644582..2644836 Nitrosomonas sp. Is79A3 10934588 YP_004695655.1 CDS Nit79A3_2484 NC_015731.1 2644833 2645213 D PFAM: PilT protein, N-terminal; KEGG: tkm:TK90_1566 PilT protein domain protein; twitching motility protein PilT 2644833..2645213 Nitrosomonas sp. Is79A3 10934589 YP_004695656.1 CDS Nit79A3_2485 NC_015731.1 2645271 2645471 D hypothetical protein 2645271..2645471 Nitrosomonas sp. Is79A3 10934590 YP_004695657.1 CDS Nit79A3_2486 NC_015731.1 2645692 2646222 R KEGG: nit:NAL212_0603 transposase IS200-family protein; transposase IS200-family protein complement(2645692..2646222) Nitrosomonas sp. Is79A3 10934591 YP_004695658.1 CDS Nit79A3_2487 NC_015731.1 2646264 2646650 R KEGG: eba:ebB104 transposase, fragment; hypothetical protein complement(2646264..2646650) Nitrosomonas sp. Is79A3 10934592 YP_004695659.1 CDS Nit79A3_2489 NC_015731.1 2654804 2655712 R KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit complement(2654804..2655712) Nitrosomonas sp. Is79A3 10934594 YP_004695660.1 CDS Nit79A3_2490 NC_015731.1 2655709 2656032 R PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein complement(2655709..2656032) Nitrosomonas sp. Is79A3 10934595 YP_004695661.1 CDS Nit79A3_2491 NC_015731.1 2656776 2658149 D PFAM: Ammonium transporter; KEGG: nit:NAL212_0965 ammonium transporter; ammonium transporter 2656776..2658149 Nitrosomonas sp. Is79A3 10934596 YP_004695662.1 CDS Nit79A3_2492 NC_015731.1 2658217 2658576 R PFAM: Helix-turn-helix, HxlR type; KEGG: nit:NAL212_0964 transcriptional regulator, HxlR family; HxlR family transcriptional regulator complement(2658217..2658576) Nitrosomonas sp. Is79A3 10934597 YP_004695663.1 CDS Nit79A3_2493 NC_015731.1 2658719 2659429 D KEGG: nit:NAL212_0963 glutathione S-transferase; glutathione S-transferase 2658719..2659429 Nitrosomonas sp. Is79A3 10934598 YP_004695664.1 CDS Nit79A3_2494 NC_015731.1 2659380 2659670 D hypothetical protein 2659380..2659670 Nitrosomonas sp. Is79A3 10934599 YP_004695665.1 CDS Nit79A3_2495 NC_015731.1 2659766 2661718 R KEGG: nit:NAL212_0461 Amylosucrase; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; alpha amylase complement(2659766..2661718) Nitrosomonas sp. Is79A3 10934600 YP_004695666.1 CDS Nit79A3_2496 NC_015731.1 2661737 2663905 R TIGRFAM: Sucrose-phosphate synthase, glycosyltransferase region; HAD-superfamily hydrolase, subfamily IIB; Sucrose phosphate synthase, sucrose phosphatase-like region; KEGG: nit:NAL212_0460 sucrose-phosphate synthase; PFAM: Sucrose-6F-phosphate phosphohydrolase, plant/cyanobacteria; Glycosyl transferase, group 1; sucrose-phosphate synthase complement(2661737..2663905) Nitrosomonas sp. Is79A3 10934601 YP_004695667.1 CDS Nit79A3_2497 NC_015731.1 2663902 2664816 R PFAM: Carbohydrate/purine kinase; KEGG: nit:NAL212_0459 PfkB domain-containing protein; PfkB domain-containing protein complement(2663902..2664816) Nitrosomonas sp. Is79A3 10934602 YP_004695668.1 CDS Nit79A3_2498 NC_015731.1 2664842 2665345 R PFAM: HPP; KEGG: nmu:Nmul_A0073 hypothetical protein; HPP family protein complement(2664842..2665345) Nitrosomonas sp. Is79A3 10934603 YP_004695669.1 CDS Nit79A3_2499 NC_015731.1 2665565 2667073 R KEGG: nit:NAL212_2793 hypothetical protein; hypothetical protein complement(2665565..2667073) Nitrosomonas sp. Is79A3 10934604 YP_004695670.1 CDS Nit79A3_2500 NC_015731.1 2667239 2667532 D PFAM: Transposase IS3/IS911; KEGG: gca:Galf_0832 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2667239..2667532 Nitrosomonas sp. Is79A3 10934605 YP_004695671.1 CDS Nit79A3_2501 NC_015731.1 2667529 2668455 D PFAM: Integrase, catalytic core; KEGG: rso:RSp0548 ISRSO8-transposase orfB protein; Integrase catalytic subunit 2667529..2668455 Nitrosomonas sp. Is79A3 10934606 YP_004695672.1 CDS Nit79A3_2503 NC_015731.1 2669754 2670842 R PFAM: Transposase, IS4-like; KEGG: psa:PST_2220 transposase; transposase IS4 family protein complement(2669754..2670842) Nitrosomonas sp. Is79A3 10934608 YP_004695673.1 CDS Nit79A3_2504 NC_015731.1 2670941 2673277 R PFAM: Glucodextranase N; Glycoside hydrolase 15-related; KEGG: afr:AFE_2224 glycosyl hydrolase, family 15; Glucodextranase N complement(2670941..2673277) Nitrosomonas sp. Is79A3 10934609 YP_004695674.1 CDS Nit79A3_2505 NC_015731.1 2673306 2675399 R KEGG: afw:Anae109_2025 transketolase; TIGRFAM: Transketolase, bacterial-like; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; transketolase complement(2673306..2675399) Nitrosomonas sp. Is79A3 10934610 YP_004695675.1 CDS Nit79A3_2506 NC_015731.1 2675532 2676218 R PFAM: ROK; KEGG: nha:Nham_2098 polyphosphate glucokinase; ROK family protein complement(2675532..2676218) Nitrosomonas sp. Is79A3 10934611 YP_004695676.1 CDS Nit79A3_2507 NC_015731.1 2676365 2677783 R KEGG: rfr:Rfer_4034 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: Glucose-6-phosphate dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase complement(2676365..2677783) Nitrosomonas sp. Is79A3 10934612 YP_004695677.1 CDS Nit79A3_2508 NC_015731.1 2677785 2678807 R KEGG: fri:FraEuI1c_1222 6-phosphogluconate dehydrogenase, decarboxylating; TIGRFAM: 6-phosphogluconate dehydrogenase related protein; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase complement(2677785..2678807) Nitrosomonas sp. Is79A3 10934613 YP_004695678.1 CDS Nit79A3_2509 NC_015731.1 2679414 2679803 R KEGG: nmu:Nmul_A2165 hypothetical protein; hypothetical protein complement(2679414..2679803) Nitrosomonas sp. Is79A3 10934614 YP_004695679.1 CDS Nit79A3_2510 NC_015731.1 2679899 2680783 R KEGG: nit:NAL212_2282 hypothetical protein; hypothetical protein complement(2679899..2680783) Nitrosomonas sp. Is79A3 10934615 YP_004695680.1 CDS Nit79A3_2511 NC_015731.1 2680973 2681449 R KEGG: meh:M301_1660 hypothetical protein; hypothetical protein complement(2680973..2681449) Nitrosomonas sp. Is79A3 10934616 YP_004695681.1 CDS Nit79A3_2512 NC_015731.1 2681446 2681646 R KEGG: meh:M301_1661 hypothetical protein; hypothetical protein complement(2681446..2681646) Nitrosomonas sp. Is79A3 10934617 YP_004695682.1 CDS Nit79A3_2513 NC_015731.1 2681909 2683360 D TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-3; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: nit:NAL212_2281 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS/PAC sensor signal transduction histidine kinase 2681909..2683360 Nitrosomonas sp. Is79A3 10934618 YP_004695683.1 CDS Nit79A3_2514 NC_015731.1 2683454 2685070 R PFAM: Transposase, IS4-like; KEGG: nit:NAL212_3145 IS5 family transposase; transposase IS4 family protein complement(2683454..2685070) Nitrosomonas sp. Is79A3 10934619 YP_004695684.1 CDS Nit79A3_2515 NC_015731.1 2685467 2685778 R KEGG: nit:NAL212_2284 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(2685467..2685778) Nitrosomonas sp. Is79A3 10934620 YP_004695685.1 CDS Nit79A3_2516 NC_015731.1 2686106 2687098 R PFAM: Protein of unknown function DUF897; KEGG: nit:NAL212_2283 hypothetical protein; hypothetical protein complement(2686106..2687098) Nitrosomonas sp. Is79A3 10934621 YP_004695686.1 CDS Nit79A3_2517 NC_015731.1 2687126 2687263 R hypothetical protein complement(2687126..2687263) Nitrosomonas sp. Is79A3 10934622 YP_004695687.1 CDS Nit79A3_2518 NC_015731.1 2687705 2689165 D TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-3; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: nit:NAL212_2281 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAS/PAC sensor signal transduction histidine kinase 2687705..2689165 Nitrosomonas sp. Is79A3 10934623 YP_004695688.1 CDS Nit79A3_2519 NC_015731.1 2689162 2689779 D KEGG: nit:NAL212_2280 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 2689162..2689779 Nitrosomonas sp. Is79A3 10934624 YP_004695689.1 CDS Nit79A3_2520 NC_015731.1 2689967 2690671 D PFAM: Major intrinsic protein; KEGG: nit:NAL212_1624 major intrinsic protein; major intrinsic protein 2689967..2690671 Nitrosomonas sp. Is79A3 10934625 YP_004695690.1 CDS Nit79A3_2521 NC_015731.1 2690805 2694590 R TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated region; DNA/RNA helicase, C-terminal; Domain of unknown function DUF1605; KEGG: nit:NAL212_2554 ATP-dependent helicase HrpA; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; ATP-dependent helicase HrpA complement(2690805..2694590) Nitrosomonas sp. Is79A3 10934626 YP_004695691.1 CDS Nit79A3_2522 NC_015731.1 2694764 2695981 R PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; KEGG: nhl:Nhal_1988 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein complement(2694764..2695981) Nitrosomonas sp. Is79A3 10934627 YP_004695692.1 CDS Nit79A3_2524 NC_015731.1 2696574 2697449 D manually curated; KEGG: pph:Ppha_2823 hypothetical protein; hypothetical protein 2696574..2697449 Nitrosomonas sp. Is79A3 10934629 YP_004695693.1 CDS Nit79A3_2525 NC_015731.1 2697512 2698360 D KEGG: nhl:Nhal_0251 protein of unknown function DUF1568; hypothetical protein 2697512..2698360 Nitrosomonas sp. Is79A3 10934630 YP_004695694.1 CDS Nit79A3_2526 NC_015731.1 2698670 2700853 D KEGG: swd:Swoo_3928 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03549; YcaO-like; PFAM: YcaO-like; Peroxiredoxin, OsmC-like protein; hypothetical protein 2698670..2700853 Nitrosomonas sp. Is79A3 10934631 YP_004695695.1 CDS Nit79A3_2528 NC_015731.1 2701368 2702369 R PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nit:NAL212_2027 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2701368..2702369) Nitrosomonas sp. Is79A3 10934633 YP_004695696.1 CDS Nit79A3_2529 NC_015731.1 2702503 2703372 D PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: nit:NAL212_2026 pirin domain-containing protein; pirin 2702503..2703372 Nitrosomonas sp. Is79A3 10934634 YP_004695697.1 CDS Nit79A3_2530 NC_015731.1 2703397 2703777 D PFAM: DoxX; KEGG: neu:NE1546 hypothetical protein; DoxX family protein 2703397..2703777 Nitrosomonas sp. Is79A3 10934635 YP_004695698.1 CDS Nit79A3_2531 NC_015731.1 2704086 2704475 D KEGG: nit:NAL212_2002 succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, cytochrome b556 subunit 2704086..2704475 Nitrosomonas sp. Is79A3 10934636 YP_004695699.1 CDS Nit79A3_2532 NC_015731.1 2704469 2704822 D KEGG: nmu:Nmul_A0862 succinate dehydrogenase, cytochrome b subunit; TIGRFAM: Succinate dehydrogenase, hydrophobic membrane anchor; PFAM: Succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, hydrophobic membrane anchor protein 2704469..2704822 Nitrosomonas sp. Is79A3 10934637 YP_004695700.1 CDS Nit79A3_2533 NC_015731.1 2704824 2706587 D KEGG: nit:NAL212_2000 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; succinate dehydrogenase, flavoprotein subunit 2704824..2706587 Nitrosomonas sp. Is79A3 10934638 YP_004695701.1 CDS Nit79A3_2534 NC_015731.1 2706652 2707692 R KEGG: sme:SM_b20914 hypothetical protein; hypothetical protein complement(2706652..2707692) Nitrosomonas sp. Is79A3 10934639 YP_004695702.1 CDS Nit79A3_2535 NC_015731.1 2707863 2708732 D PFAM: UspA; KEGG: bav:BAV3184 universal stress protein; UspA domain-containing protein 2707863..2708732 Nitrosomonas sp. Is79A3 10934640 YP_004695703.1 CDS Nit79A3_2536 NC_015731.1 2708764 2711478 R KEGG: hch:HCH_06855 cation transport ATPase; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; P-type HAD superfamily ATPase complement(2708764..2711478) Nitrosomonas sp. Is79A3 10934641 YP_004695704.1 CDS Nit79A3_2537 NC_015731.1 2711558 2711992 R PFAM: UspA; KEGG: app:CAP2UW1_3847 UspA domain-containing protein; UspA domain-containing protein complement(2711558..2711992) Nitrosomonas sp. Is79A3 10934642 YP_004695705.1 CDS Nit79A3_2538 NC_015731.1 2712299 2713117 D KEGG: tsa:AciPR4_2812 hypothetical protein; hypothetical protein 2712299..2713117 Nitrosomonas sp. Is79A3 10934643 YP_004695706.1 CDS Nit79A3_2539 NC_015731.1 2713344 2713778 R PFAM: UspA; KEGG: app:CAP2UW1_0552 UspA domain-containing protein; UspA domain-containing protein complement(2713344..2713778) Nitrosomonas sp. Is79A3 10934644 YP_004695707.1 CDS Nit79A3_2541 NC_015731.1 2714192 2715028 R KEGG: nit:NAL212_2578 nuclease (SNase domain-containing protein); PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like); nuclease complement(2714192..2715028) Nitrosomonas sp. Is79A3 10934646 YP_004695708.1 CDS Nit79A3_2542 NC_015731.1 2715339 2716790 D KEGG: cpb:Cphamn1_2069 amino acid carrier protein; TIGRFAM: Sodium:alanine symporter; PFAM: Sodium:alanine symporter; amino acid carrier protein 2715339..2716790 Nitrosomonas sp. Is79A3 10934647 YP_004695709.1 CDS Nit79A3_2543 NC_015731.1 2716906 2717718 D KEGG: nit:NAL212_2577 sulfate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 2716906..2717718 Nitrosomonas sp. Is79A3 10934648 YP_004695710.1 CDS Nit79A3_2544 NC_015731.1 2717711 2718508 D KEGG: nit:NAL212_2576 hypothetical protein; TIGRFAM: Protein of unknown function DUF140; PFAM: Protein of unknown function DUF140; hypothetical protein 2717711..2718508 Nitrosomonas sp. Is79A3 10934649 YP_004695711.1 CDS Nit79A3_2545 NC_015731.1 2718508 2718975 D PFAM: Mammalian cell entry related; KEGG: nit:NAL212_2575 mammalian cell entry related domain-containing protein; Mammalian cell entry related domain-containing protein 2718508..2718975 Nitrosomonas sp. Is79A3 10934650 YP_004695712.1 CDS Nit79A3_2546 NC_015731.1 2719050 2719670 D PFAM: Toluene tolerance; KEGG: nit:NAL212_2574 toluene tolerance family protein; toluene tolerance family protein 2719050..2719670 Nitrosomonas sp. Is79A3 10934651 YP_004695713.1 CDS Nit79A3_2547 NC_015731.1 2719680 2720018 D PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: nit:NAL212_2573 sulfate transporter/antisigma-factor antagonist STAS; Sulfate transporter/antisigma-factor antagonist STAS 2719680..2720018 Nitrosomonas sp. Is79A3 10934652 YP_004695714.1 CDS Nit79A3_2548 NC_015731.1 2720081 2720998 D KEGG: nit:NAL212_2572 sulfate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 2720081..2720998 Nitrosomonas sp. Is79A3 10934653 YP_004695715.1 CDS Nit79A3_2549 NC_015731.1 2720995 2721750 D PFAM: ABC-2 type transporter; KEGG: nit:NAL212_2571 ABC-2 type transporter; ABC transporter 2720995..2721750 Nitrosomonas sp. Is79A3 10934654 YP_004695716.1 CDS Nit79A3_2550 NC_015731.1 2721814 2722056 D PFAM: BolA-like protein; KEGG: nit:NAL212_2570 BolA family protein; BolA family protein 2721814..2722056 Nitrosomonas sp. Is79A3 10934655 YP_004695717.1 CDS Nit79A3_2551 NC_015731.1 2722167 2722955 D KEGG: nit:NAL212_2569 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 2722167..2722955 Nitrosomonas sp. Is79A3 10934656 YP_004695718.1 CDS Nit79A3_2552 NC_015731.1 2723102 2723710 D PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: nit:NAL212_2568 glutathione S-transferase domain; Glutathione S-transferase domain-containing protein 2723102..2723710 Nitrosomonas sp. Is79A3 10934657 YP_004695719.1 CDS Nit79A3_2553 NC_015731.1 2723772 2724308 R KEGG: psl:Psta_2573 hypothetical protein; hypothetical protein complement(2723772..2724308) Nitrosomonas sp. Is79A3 10934658 YP_004695720.1 CDS Nit79A3_2554 NC_015731.1 2724765 2725928 R KEGG: nde:NIDE1370 hypothetical protein; hypothetical protein complement(2724765..2725928) Nitrosomonas sp. Is79A3 10934659 YP_004695721.1 CDS Nit79A3_2555 NC_015731.1 2726356 2727573 R PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; KEGG: nhl:Nhal_1988 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein complement(2726356..2727573) Nitrosomonas sp. Is79A3 10934660 YP_004695722.1 CDS Nit79A3_2556 NC_015731.1 2728006 2728893 R PFAM: SEC-C motif; KEGG: hypothetical protein; SEC-C motif domain-containing protein complement(2728006..2728893) Nitrosomonas sp. Is79A3 10934661 YP_004695723.1 CDS Nit79A3_2557 NC_015731.1 2729163 2730380 D PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; KEGG: nhl:Nhal_1988 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 2729163..2730380 Nitrosomonas sp. Is79A3 10934662 YP_004695724.1 CDS Nit79A3_2558 NC_015731.1 2730502 2732535 R PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; KEGG: nit:NAL212_0946 peptidase M1 membrane alanine aminopeptidase; peptidase M1 membrane alanine aminopeptidase complement(2730502..2732535) Nitrosomonas sp. Is79A3 10934663 YP_004695725.1 CDS Nit79A3_2559 NC_015731.1 2732554 2733783 R KEGG: nit:NAL212_0945 hypothetical protein; PFAM: Protein of unknown function DUF399; SMART: PDZ/DHR/GLGF; hypothetical protein complement(2732554..2733783) Nitrosomonas sp. Is79A3 10934664 YP_004695726.1 CDS Nit79A3_2560 NC_015731.1 2733900 2737910 R TIGRFAM: Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria; HAMAP: Phosphoribosylformylglycinamidine synthase; KEGG: nit:NAL212_0944 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; Phosphoribosylformylglycinamidine synthase complement(2733900..2737910) Nitrosomonas sp. Is79A3 10934665 YP_004695727.1 CDS Nit79A3_2561 NC_015731.1 2737996 2739513 D KEGG: nit:NAL212_0943 YjeF-like protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; PFAM: YjeF-related protein, N-terminal; Uncharacterised protein family, carbohydrate kinase-related; hypothetical protein 2737996..2739513 Nitrosomonas sp. Is79A3 10934666 YP_004695728.1 CDS Nit79A3_2562 NC_015731.1 2739564 2740457 R PFAM: ROK; KEGG: dar:Daro_0037 N-acetylglucosamine kinase; ROK family protein complement(2739564..2740457) Nitrosomonas sp. Is79A3 10934667 YP_004695729.1 CDS Nit79A3_2563 NC_015731.1 2740683 2741366 R KEGG: nmu:Nmul_A2026 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(2740683..2741366) Nitrosomonas sp. Is79A3 10934668 YP_004695730.1 CDS Nit79A3_2564 NC_015731.1 2741939 2742568 R KEGG: tbd:Tbd_1584 hypothetical protein; hypothetical protein complement(2741939..2742568) Nitrosomonas sp. Is79A3 10934669 YP_004695731.1 CDS Nit79A3_2565 NC_015731.1 2742565 2743662 R PFAM: Radical SAM; KEGG: nit:NAL212_1536 radical SAM domain-containing protein; Radical SAM domain-containing protein complement(2742565..2743662) Nitrosomonas sp. Is79A3 10934670 YP_004695732.1 CDS Nit79A3_2566 NC_015731.1 2743655 2744248 R KEGG: nit:NAL212_1535 AMMECR1 domain-containing protein; TIGRFAM: AMMECR1; PFAM: AMMECR1; AMMECR1 domain-containing protein complement(2743655..2744248) Nitrosomonas sp. Is79A3 10934671 YP_004695733.1 CDS Nit79A3_2567 NC_015731.1 2744263 2745045 R PFAM: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related; KEGG: nit:NAL212_1534 hypothetical protein; hypothetical protein complement(2744263..2745045) Nitrosomonas sp. Is79A3 10934672 YP_004695734.1 CDS Nit79A3_2568 NC_015731.1 2745158 2745895 R KEGG: sat:SYN_02040 cytoplasmic protein; cytoplasmic protein complement(2745158..2745895) Nitrosomonas sp. Is79A3 10934673 YP_004695735.1 CDS Nit79A3_2569 NC_015731.1 2745944 2747131 R KEGG: nit:NAL212_1533 lipase class 3; lipase class 3 complement(2745944..2747131) Nitrosomonas sp. Is79A3 10934674 YP_004695736.1 CDS Nit79A3_2570 NC_015731.1 2747776 2748315 D KEGG: meh:M301_2279 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 2747776..2748315 Nitrosomonas sp. Is79A3 10934675 YP_004695737.1 CDS Nit79A3_2571 NC_015731.1 2748519 2749433 R PFAM: ApbE-like lipoprotein; KEGG: nit:NAL212_1532 ApbE family lipoprotein; ApbE family lipoprotein complement(2748519..2749433) Nitrosomonas sp. Is79A3 10934676 YP_004695738.1 CDS Nit79A3_2572 NC_015731.1 2749498 2752197 R KEGG: nit:NAL212_1531 hypothetical protein; hypothetical protein complement(2749498..2752197) Nitrosomonas sp. Is79A3 10934677 YP_004695739.1 CDS Nit79A3_2573 NC_015731.1 2752255 2752509 R KEGG: nit:NAL212_1530 arginine decarboxylase; arginine decarboxylase complement(2752255..2752509) Nitrosomonas sp. Is79A3 10934678 YP_004695740.1 CDS Nit79A3_2574 NC_015731.1 2752512 2753018 R PFAM: Redoxin; KEGG: nit:NAL212_0020 redoxin domain-containing protein; Redoxin domain-containing protein complement(2752512..2753018) Nitrosomonas sp. Is79A3 10934679 YP_004695741.1 CDS Nit79A3_2575 NC_015731.1 2753075 2753533 R KEGG: nit:NAL212_1528 hypothetical protein; hypothetical protein complement(2753075..2753533) Nitrosomonas sp. Is79A3 10934680 YP_004695742.1 CDS Nit79A3_2576 NC_015731.1 2753677 2754453 R KEGG: nit:NAL212_1527 hypothetical protein; hypothetical protein complement(2753677..2754453) Nitrosomonas sp. Is79A3 10934681 YP_004695743.1 CDS Nit79A3_2577 NC_015731.1 2754593 2755327 R KEGG: nit:NAL212_1527 hypothetical protein; hypothetical protein complement(2754593..2755327) Nitrosomonas sp. Is79A3 10934682 YP_004695744.1 CDS Nit79A3_2578 NC_015731.1 2755819 2757372 D KEGG: nit:NAL212_1814 hypothetical protein; hypothetical protein 2755819..2757372 Nitrosomonas sp. Is79A3 10934683 YP_004695745.1 CDS Nit79A3_2579 NC_015731.1 2757390 2759066 R KEGG: nit:NAL212_1816 DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC protein, N-terminal; DNA repair protein RecN complement(2757390..2759066) Nitrosomonas sp. Is79A3 10934684 YP_004695746.1 CDS Nit79A3_2580 NC_015731.1 2759089 2759961 R KEGG: nit:NAL212_1817 ATP-NAD/AcoX kinase; HAMAP: inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD/AcoX kinase; inorganic polyphosphate/ATP-NAD kinase complement(2759089..2759961) Nitrosomonas sp. Is79A3 10934685 YP_004695747.1 CDS Nit79A3_2581 NC_015731.1 2760262 2761281 D TIGRFAM: Negative regulator of class I heat shock protein; HAMAP: Negative regulator of class I heat shock protein; KEGG: nit:NAL212_1818 heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; heat-inducible transcription repressor HrcA 2760262..2761281 Nitrosomonas sp. Is79A3 10934686 YP_004695748.1 CDS Nit79A3_2582 NC_015731.1 2761380 2762465 D TIGRFAM: Ferrochelatase; HAMAP: Ferrochelatase; KEGG: nit:NAL212_1819 ferrochelatase; PFAM: Ferrochelatase; ferrochelatase 2761380..2762465 Nitrosomonas sp. Is79A3 10934687 YP_004695749.1 CDS Nit79A3_2583 NC_015731.1 2762513 2762857 R KEGG: nit:NAL212_1820 hypothetical protein; hypothetical protein complement(2762513..2762857) Nitrosomonas sp. Is79A3 10934688 YP_004695750.1 CDS Nit79A3_2584 NC_015731.1 2763248 2763562 D KEGG: nit:NAL212_1245 hypothetical protein; hypothetical protein 2763248..2763562 Nitrosomonas sp. Is79A3 10934689 YP_004695751.1 CDS Nit79A3_2585 NC_015731.1 2763643 2763936 D PFAM: Peptidase M4, propeptide, PepSY; KEGG: nit:NAL212_1246 peptidase; Propeptide PepSY amd peptidase M4 2763643..2763936 Nitrosomonas sp. Is79A3 10934690 YP_004695752.1 CDS Nit79A3_2586 NC_015731.1 2763973 2764659 D KEGG: nit:NAL212_1247 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator 2763973..2764659 Nitrosomonas sp. Is79A3 10934691 YP_004695753.1 CDS Nit79A3_2587 NC_015731.1 2764656 2765990 D KEGG: nit:NAL212_1248 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 2764656..2765990 Nitrosomonas sp. Is79A3 10934692 YP_004695754.1 CDS Nit79A3_2588 NC_015731.1 2766009 2766281 R PFAM: Uncharacterised protein family UPF0016; KEGG: nit:NAL212_1251 hypothetical protein; hypothetical protein complement(2766009..2766281) Nitrosomonas sp. Is79A3 10934693 YP_004695755.1 CDS Nit79A3_2589 NC_015731.1 2766533 2769316 R TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; PAS fold; PAS fold-4; KEGG: slt:Slit_0879 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAC motif; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(2766533..2769316) Nitrosomonas sp. Is79A3 10934694 YP_004695756.1 CDS Nit79A3_2590 NC_015731.1 2769562 2772387 R KEGG: ddf:DEFDS_0291 hypothetical protein; hypothetical protein complement(2769562..2772387) Nitrosomonas sp. Is79A3 10934695 YP_004695757.1 CDS Nit79A3_2591 NC_015731.1 2772380 2773318 R KEGG: bal:BACI_pCIXO100200 hypothetical protein; hypothetical protein complement(2772380..2773318) Nitrosomonas sp. Is79A3 10934696 YP_004695758.1 CDS Nit79A3_2592 NC_015731.1 2773315 2773779 R KEGG: nhl:Nhal_3964 N-6 DNA methylase; N-6 DNA methylase complement(2773315..2773779) Nitrosomonas sp. Is79A3 10934697 YP_004695759.1 CDS Nit79A3_2593 NC_015731.1 2774331 2775554 D PFAM: Integrase, catalytic core, phage; KEGG: bxe:Bxe_A2541 CP4-like integrase; integrase 2774331..2775554 Nitrosomonas sp. Is79A3 10934698 YP_004695760.1 CDS Nit79A3_2594 NC_015731.1 2776172 2776429 D KEGG: har:HEAR3024 DNA-binding; repressor; transcription; transcription regulation; hypothetical protein 2776172..2776429 Nitrosomonas sp. Is79A3 10934699 YP_004695761.1 CDS Nit79A3_2595 NC_015731.1 2776769 2777713 D hypothetical protein 2776769..2777713 Nitrosomonas sp. Is79A3 10934700 YP_004695762.1 CDS Nit79A3_2596 NC_015731.1 2777847 2778095 D PFAM: Prophage CP4-57 regulatory; KEGG: nmu:Nmul_A2182 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA 2777847..2778095 Nitrosomonas sp. Is79A3 10934701 YP_004695763.1 CDS Nit79A3_2597 NC_015731.1 2778092 2778466 D hypothetical protein 2778092..2778466 Nitrosomonas sp. Is79A3 10934702 YP_004695764.1 CDS Nit79A3_2598 NC_015731.1 2778727 2779329 D KEGG: rpi:Rpic_2741 hypothetical protein; hypothetical protein 2778727..2779329 Nitrosomonas sp. Is79A3 10934703 YP_004695765.1 CDS Nit79A3_2599 NC_015731.1 2779307 2782162 D PFAM: Protein of unknown function DUF927; KEGG: pfl:PFL_4979 hypothetical protein; hypothetical protein 2779307..2782162 Nitrosomonas sp. Is79A3 10934704 YP_004695766.1 CDS Nit79A3_2600 NC_015731.1 2782125 2782796 D hypothetical protein 2782125..2782796 Nitrosomonas sp. Is79A3 10934705 YP_004695767.1 CDS Nit79A3_2601 NC_015731.1 2783221 2785464 D TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria; PFAM: Ribonuclease II/R; Ribonuclease B, OB region N-terminal; Ribosomal protein S1, RNA binding domain; KEGG: nit:NAL212_1357 ribonuclease R; SMART: Cold shock protein; ribonuclease R 2783221..2785464 Nitrosomonas sp. Is79A3 10934707 YP_004695768.1 CDS Nit79A3_2602 NC_015731.1 2785616 2786356 D KEGG: nit:NAL212_1356 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; TrmH family RNA methyltransferase 2785616..2786356 Nitrosomonas sp. Is79A3 10934708 YP_004695769.1 CDS Nit79A3_2603 NC_015731.1 2786461 2788218 D TIGRFAM: Arginyl-tRNA synthetase, class Ic; HAMAP: Arginyl-tRNA synthetase, class Ic; KEGG: nit:NAL212_1355 arginyl-tRNA synthetase; arginyl-tRNA synthetase 2786461..2788218 Nitrosomonas sp. Is79A3 10934709 YP_004695770.1 CDS Nit79A3_2604 NC_015731.1 2788243 2789031 D PFAM: Sporulation/cell division region, bacteria; KEGG: nit:NAL212_1354 sporulation domain-containing protein; Sporulation domain-containing protein 2788243..2789031 Nitrosomonas sp. Is79A3 10934710 YP_004695771.1 CDS Nit79A3_2605 NC_015731.1 2789130 2789768 D PFAM: DSBA oxidoreductase; KEGG: nit:NAL212_1353 DsbA oxidoreductase; DSBA oxidoreductase 2789130..2789768 Nitrosomonas sp. Is79A3 10934711 YP_004695772.1 CDS Nit79A3_2606 NC_015731.1 2789843 2790307 D TIGRFAM: Peptide methionine sulphoxide reductase MsrA; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: nit:NAL212_1352 peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA; peptide methionine sulfoxide reductase 2789843..2790307 Nitrosomonas sp. Is79A3 10934712 YP_004695773.1 CDS Nit79A3_2607 NC_015731.1 2790457 2792070 D PFAM: Metal-dependent hydrolase HDOD; KEGG: nit:NAL212_1351 signal transduction protein; signal transduction protein 2790457..2792070 Nitrosomonas sp. Is79A3 10934713 YP_004695774.1 CDS Nit79A3_2608 NC_015731.1 2792111 2792728 D SMART: Guanylate kinase/L-type calcium channel region; TIGRFAM: Guanylate kinase, sub-group; KEGG: nit:NAL212_1350 guanylate kinase; HAMAP: Guanylate kinase, sub-group; PFAM: Guanylate kinase; guanylate kinase 2792111..2792728 Nitrosomonas sp. Is79A3 10934714 YP_004695775.1 CDS Nit79A3_2609 NC_015731.1 2792814 2793020 D TIGRFAM: DNA-directed RNA polymerase, omega subunit; HAMAP: DNA-directed RNA polymerase, omega subunit; KEGG: nit:NAL212_1349 DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; DNA-directed RNA polymerase subunit omega 2792814..2793020 Nitrosomonas sp. Is79A3 10934715 YP_004695776.1 CDS Nit79A3_2610 NC_015731.1 2793254 2795359 D TIGRFAM: RelA/SpoT protein; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD region, subdomain; TGS; Amino acid-binding ACT; KEGG: nit:NAL212_1348 (p)ppGpp synthetase I, SpoT/RelA; SMART: Metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA 2793254..2795359 Nitrosomonas sp. Is79A3 10934716 YP_004695777.1 CDS Nit79A3_2611 NC_015731.1 2795436 2796395 R PFAM: Cytochrome c assembly protein; KEGG: nit:NAL212_1457 cytochrome c assembly protein; cytochrome c assembly protein complement(2795436..2796395) Nitrosomonas sp. Is79A3 10934717 YP_004695778.1 CDS Nit79A3_2612 NC_015731.1 2796417 2797766 D TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; KEGG: nit:NAL212_1456 signal recognition particle protein; SMART: ATPase, AAA+ type, core; signal recognition particle protein 2796417..2797766 Nitrosomonas sp. Is79A3 10934718 YP_004695779.1 CDS Nit79A3_2613 NC_015731.1 2797985 2798434 R TIGRFAM: DeoxyUTP pyrophosphatase domain, subfamily 1,; HAMAP: Deoxyuridine 5'-triphosphate nucleotidohydrolase; KEGG: nit:NAL212_1454 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: DeoxyUTP pyrophosphatase domain; Deoxyuridine 5'-triphosphate nucleotidohydrolase complement(2797985..2798434) Nitrosomonas sp. Is79A3 10934719 YP_004695780.1 CDS Nit79A3_2614 NC_015731.1 2798460 2799662 R KEGG: nit:NAL212_1453 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase complement(2798460..2799662) Nitrosomonas sp. Is79A3 10934720 YP_004695781.1 CDS Nit79A3_2615 NC_015731.1 2799887 2800561 D KEGG: nit:NAL212_1452 DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like; PFAM: DNA repair, RadC-like; DNA repair protein RadC 2799887..2800561 Nitrosomonas sp. Is79A3 10934721 YP_004695782.1 CDS Nit79A3_2616 NC_015731.1 2800728 2800964 D TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: nit:NAL212_1451 50S ribosomal protein L28; PFAM: Ribosomal protein L28; 50S ribosomal protein L28 2800728..2800964 Nitrosomonas sp. Is79A3 10934722 YP_004695783.1 CDS Nit79A3_2617 NC_015731.1 2800999 2801154 D TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: net:Neut_0780 50S ribosomal protein L33; PFAM: Ribosomal protein L33; 50S ribosomal protein L33 2800999..2801154 Nitrosomonas sp. Is79A3 10934723 YP_004695784.1 CDS Nit79A3_2618 NC_015731.1 2801239 2802429 R PFAM: Fatty acid desaturase, type 1; KEGG: nit:NAL212_1449 fatty acid desaturase; fatty acid desaturase complement(2801239..2802429) Nitrosomonas sp. Is79A3 10934724 YP_004695785.1 CDS Nit79A3_2619 NC_015731.1 2802724 2803281 R KEGG: nit:NAL212_1448 pseudouridine synthase Rsu; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; pseudouridine synthase complement(2802724..2803281) Nitrosomonas sp. Is79A3 10934725 YP_004695786.1 CDS Nit79A3_2620 NC_015731.1 2803321 2803773 R PFAM: Phosphoglycerate mutase; KEGG: nit:NAL212_1447 phosphohistidine phosphatase, SixA; phosphohistidine phosphatase, SixA complement(2803321..2803773) Nitrosomonas sp. Is79A3 10934726 YP_004695787.1 CDS Nit79A3_2621 NC_015731.1 2803806 2804102 R TIGRFAM: Conserved hypothetical protein CHP00251; HAMAP: Protein of unknown function DUF167; KEGG: nit:NAL212_1446 hypothetical protein; PFAM: Protein of unknown function DUF167; hypothetical protein complement(2803806..2804102) Nitrosomonas sp. Is79A3 10934727 YP_004695788.1 CDS Nit79A3_2622 NC_015731.1 2804118 2804693 R PFAM: Protein of unknown function YGGT; KEGG: nit:NAL212_1445 hypothetical protein; hypothetical protein complement(2804118..2804693) Nitrosomonas sp. Is79A3 10934728 YP_004695789.1 CDS Nit79A3_2623 NC_015731.1 2804756 2805568 R KEGG: nit:NAL212_1444 pyrroline-5-carboxylate reductase; TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; pyrroline-5-carboxylate reductase complement(2804756..2805568) Nitrosomonas sp. Is79A3 10934729 YP_004695790.1 CDS Nit79A3_2624 NC_015731.1 2805682 2806512 R TIGRFAM: DNA glycosylase/AP lyase; HAMAP: Formamidopyrimidine-DNA glycosylase; KEGG: nit:NAL212_1443 formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase complement(2805682..2806512) Nitrosomonas sp. Is79A3 10934730 YP_004695791.1 CDS Nit79A3_2625 NC_015731.1 2806512 2807384 R manually curated; KEGG: nit:NAL212_1442 hypothetical protein; hypothetical protein complement(2806512..2807384) Nitrosomonas sp. Is79A3 10934731 YP_004695792.1 CDS Nit79A3_2626 NC_015731.1 2807387 2808745 R PFAM: ABC-type uncharacterised transport system; KEGG: nit:NAL212_1441 ABC transporter; ABC transporter complement(2807387..2808745) Nitrosomonas sp. Is79A3 10934732 YP_004695793.1 CDS Nit79A3_2627 NC_015731.1 2808763 2809506 R KEGG: nit:NAL212_1440 ABC-2 type transport system permease; ABC-2 type transport system permease complement(2808763..2809506) Nitrosomonas sp. Is79A3 10934733 YP_004695794.1 CDS Nit79A3_2628 NC_015731.1 2809529 2810257 R KEGG: nit:NAL212_1439 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter complement(2809529..2810257) Nitrosomonas sp. Is79A3 10934734 YP_004695795.1 CDS Nit79A3_2629 NC_015731.1 2810812 2811501 D PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: nit:NAL212_1438 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 2810812..2811501 Nitrosomonas sp. Is79A3 10934735 YP_004695796.1 CDS Nit79A3_2630 NC_015731.1 2811579 2812910 D KEGG: nit:NAL212_1437 S-adenosylhomocysteine deaminase; HAMAP: 5-methylthioadenosine/S-adenosylhomocysteine deaminase; PFAM: Amidohydrolase 1; 5-methylthioadenosine/S-adenosylhomocysteine deaminase 2811579..2812910 Nitrosomonas sp. Is79A3 10934736 YP_004695797.1 CDS Nit79A3_2631 NC_015731.1 2812930 2813637 D TIGRFAM: Ubiquinone biosynthesis O-methyltransferase; HAMAP: 3-demethylubiquinone-9 3-methyltransferase; KEGG: nit:NAL212_1436 ubiquinone biosynthesis O-methyltransferase; PFAM: Methyltransferase type 11; 3-demethylubiquinone-9 3-methyltransferase 2812930..2813637 Nitrosomonas sp. Is79A3 10934737 YP_004695798.1 CDS Nit79A3_2632 NC_015731.1 2813800 2814447 D KEGG: nit:NAL212_1435 phosphoglycolate phosphatase; TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; phosphoglycolate phosphatase 2813800..2814447 Nitrosomonas sp. Is79A3 10934738 YP_004695799.1 CDS Nit79A3_2633 NC_015731.1 2815161 2816873 D PFAM: Replication endonuclease, probable, phage; KEGG: nit:NAL212_1434 replication protein A; replication gene A 2815161..2816873 Nitrosomonas sp. Is79A3 10934740 YP_004695800.1 CDS Nit79A3_2634 NC_015731.1 2816851 2817123 D KEGG: nit:NAL212_1433 hypothetical protein; hypothetical protein 2816851..2817123 Nitrosomonas sp. Is79A3 10934741 YP_004695801.1 CDS Nit79A3_2635 NC_015731.1 2817201 2817614 D KEGG: nit:NAL212_1432 hypothetical protein; hypothetical protein 2817201..2817614 Nitrosomonas sp. Is79A3 10934742 YP_004695802.1 CDS Nit79A3_2636 NC_015731.1 2817611 2817805 D PFAM: HTH transcriptional regulator, MerR; KEGG: nit:NAL212_1431 hypothetical protein; regulatory protein MerR 2817611..2817805 Nitrosomonas sp. Is79A3 10934743 YP_004695803.1 CDS Nit79A3_2637 NC_015731.1 2817781 2818866 D PFAM: Integrase, catalytic core, phage; KEGG: nit:NAL212_1430 hypothetical protein; integrase 2817781..2818866 Nitrosomonas sp. Is79A3 10934744 YP_004695804.1 CDS Nit79A3_2638 NC_015731.1 2818903 2819205 D PFAM: Protein of unknown function DUF2136; KEGG: nit:NAL212_1429 hypothetical protein; hypothetical protein 2818903..2819205 Nitrosomonas sp. Is79A3 10934745 YP_004695805.1 CDS Nit79A3_2639 NC_015731.1 2819226 2819600 D PFAM: Helix-turn-helix type 3; KEGG: neu:NE1587 helix-hairpin-helix DNA-binding motif-containing protein; XRE family transcriptional regulator 2819226..2819600 Nitrosomonas sp. Is79A3 10934746 YP_004695806.1 CDS Nit79A3_2640 NC_015731.1 2819887 2822346 D KEGG: hypothetical protein; hypothetical protein 2819887..2822346 Nitrosomonas sp. Is79A3 10934747 YP_004695807.1 CDS Nit79A3_2641 NC_015731.1 2822712 2822870 D hypothetical protein 2822712..2822870 Nitrosomonas sp. Is79A3 10934748 YP_004695808.1 CDS Nit79A3_2642 NC_015731.1 2822943 2823191 R hypothetical protein complement(2822943..2823191) Nitrosomonas sp. Is79A3 10934749 YP_004695809.1 CDS Nit79A3_2643 NC_015731.1 2823753 2824457 R PFAM: Glutaredoxin; KEGG: amr:AM1_3463 membrane associated glutaredoxin; glutaredoxin complement(2823753..2824457) Nitrosomonas sp. Is79A3 10934750 YP_004695810.1 CDS Nit79A3_2644 NC_015731.1 2824643 2826373 R PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; KEGG: nit:NAL212_0932 pyruvate dehydrogenase (cytochrome); thiamine pyrophosphate TPP-binding domain-containing protein complement(2824643..2826373) Nitrosomonas sp. Is79A3 10934751 YP_004695811.1 CDS Nit79A3_2645 NC_015731.1 2826984 2827142 R KEGG: gur:Gura_2402 hypothetical protein; hypothetical protein complement(2826984..2827142) Nitrosomonas sp. Is79A3 10934752 YP_004695812.1 CDS Nit79A3_2646 NC_015731.1 2827207 2827413 R KEGG: bpy:Bphyt_0354 hypothetical protein; hypothetical protein complement(2827207..2827413) Nitrosomonas sp. Is79A3 10934753 YP_004695813.1 CDS Nit79A3_2647 NC_015731.1 2827659 2828009 D PFAM: CsbD-like; KEGG: nmu:Nmul_A1602 CsbD-like; CsbD family protein 2827659..2828009 Nitrosomonas sp. Is79A3 10934754 YP_004695814.1 CDS Nit79A3_2648 NC_015731.1 2828142 2828267 D PFAM: Entericidin EcnAB; KEGG: nmu:Nmul_A1920 entericidin EcnAB; entericidin A/B 2828142..2828267 Nitrosomonas sp. Is79A3 10934755 YP_004695815.1 CDS Nit79A3_2649 NC_015731.1 2828352 2828675 D PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein 2828352..2828675 Nitrosomonas sp. Is79A3 10934756 YP_004695816.1 CDS Nit79A3_2650 NC_015731.1 2828672 2829580 D KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 2828672..2829580 Nitrosomonas sp. Is79A3 10934757 YP_004695817.1 CDS Nit79A3_2653 NC_015731.1 2831569 2832477 R KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit complement(2831569..2832477) Nitrosomonas sp. Is79A3 10934759 YP_004695818.1 CDS Nit79A3_2654 NC_015731.1 2832474 2832797 R KEGG: net:Neut_2500 transposase IS3/IS911; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein complement(2832474..2832797) Nitrosomonas sp. Is79A3 10934760 YP_004695819.1 CDS Nit79A3_2655 NC_015731.1 2833646 2833855 D KEGG: nit:NAL212_2601 transposase IS200-family protein; transposase IS200-family protein 2833646..2833855 Nitrosomonas sp. Is79A3 10934761 YP_004695820.1 CDS Nit79A3_2656 NC_015731.1 2833902 2834495 D PFAM: Domain of unknown function DUF1994; KEGG: abo:ABO_2551 hypothetical protein; hypothetical protein 2833902..2834495 Nitrosomonas sp. Is79A3 10934762 YP_004695821.1 CDS Nit79A3_2657 NC_015731.1 2834711 2834986 D PFAM: Excinuclease ABC, C subunit, N-terminal; KEGG: gpb:HDN1F_24460 predicted endonuclease containing URI domain; excinuclease ABC subunit C 2834711..2834986 Nitrosomonas sp. Is79A3 10934763 YP_004695822.1 CDS Nit79A3_2658 NC_015731.1 2835172 2835675 D KEGG: nit:NAL212_2279 hypothetical protein; hypothetical protein 2835172..2835675 Nitrosomonas sp. Is79A3 10934764 YP_004695823.1 CDS Nit79A3_2659 NC_015731.1 2835690 2836241 D KEGG: nit:NAL212_2278 hypothetical protein; hypothetical protein 2835690..2836241 Nitrosomonas sp. Is79A3 10934765 YP_004695824.1 CDS Nit79A3_2661 NC_015731.1 2836484 2837425 R KEGG: nit:NAL212_0005 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter complement(2836484..2837425) Nitrosomonas sp. Is79A3 10934767 YP_004695825.1 CDS Nit79A3_2662 NC_015731.1 2837614 2837823 R hypothetical protein complement(2837614..2837823) Nitrosomonas sp. Is79A3 10934768 YP_004695826.1 CDS Nit79A3_2663 NC_015731.1 2838127 2838303 R hypothetical protein complement(2838127..2838303) Nitrosomonas sp. Is79A3 10934769 YP_004695827.1 CDS Nit79A3_2664 NC_015731.1 2838386 2839204 R PFAM: Protein of unknown function DUF81; KEGG: nit:NAL212_2587 hypothetical protein; hypothetical protein complement(2838386..2839204) Nitrosomonas sp. Is79A3 10934770 YP_004695828.1 CDS Nit79A3_2665 NC_015731.1 2839209 2840897 R KEGG: neu:NE2567 hypothetical protein; TIGRFAM: Beta-lactamase hydrolase-like; PFAM: Beta-lactamase hydrolase-like; Lycopene beta/epsilon cyclase; beta-lactamase hydrolase-family protein complement(2839209..2840897) Nitrosomonas sp. Is79A3 10934771 YP_004695829.1 CDS Nit79A3_2666 NC_015731.1 2841003 2841410 R KEGG: neu:NE2568 ArsR family regulatory protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR complement(2841003..2841410) Nitrosomonas sp. Is79A3 10934772 YP_004695830.1 CDS Nit79A3_2667 NC_015731.1 2841475 2841915 R PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: nmu:Nmul_A1684 YeeE/YedE; hypothetical protein complement(2841475..2841915) Nitrosomonas sp. Is79A3 10934773 YP_004695831.1 CDS Nit79A3_2668 NC_015731.1 2841941 2842372 R PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: net:Neut_2529 protein of unknown function DUF395, YeeE/YedE; hypothetical protein complement(2841941..2842372) Nitrosomonas sp. Is79A3 10934774 YP_004695832.1 CDS Nit79A3_2669 NC_015731.1 2842476 2843336 D KEGG: neu:NE2571 metallo-beta-lactamase superfamily protein; metallo-beta-lactamase superfamily protein 2842476..2843336 Nitrosomonas sp. Is79A3 10934775 YP_004695833.1 CDS Nit79A3_2670 NC_015731.1 2843477 2845933 D KEGG: reu:Reut_A1185 ATPase, E1-E2 type; TIGRFAM: ATPase, P-type, plasma-membrane proton-efflux; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; plasma-membrane proton-efflux P-type ATPase 2843477..2845933 Nitrosomonas sp. Is79A3 10934776 YP_004695834.1 CDS Nit79A3_2672 NC_015731.1 2846161 2846484 R KEGG: net:Neut_1719 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(2846161..2846484) Nitrosomonas sp. Is79A3 10934778 YP_004695835.1 CDS Nit79A3_2674 NC_015731.1 2847441 2847731 D KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein 2847441..2847731 Nitrosomonas sp. Is79A3 10934779 YP_004695836.1 CDS Nit79A3_2675 NC_015731.1 2847722 2848069 D KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein 2847722..2848069 Nitrosomonas sp. Is79A3 10934780 YP_004695837.1 CDS Nit79A3_2676 NC_015731.1 2848119 2849702 D KEGG: nit:NAL212_0062 transposase IS66; manually curated; PFAM: Transposase, IS66; transposase IS66 2848119..2849702 Nitrosomonas sp. Is79A3 10934781 YP_004695838.1 CDS Nit79A3_2677 NC_015731.1 2850132 2850539 R KEGG: nit:NAL212_0951 hypothetical protein; hypothetical protein complement(2850132..2850539) Nitrosomonas sp. Is79A3 10934782 YP_004695839.1 CDS Nit79A3_2678 NC_015731.1 2850536 2850769 R hypothetical protein complement(2850536..2850769) Nitrosomonas sp. Is79A3 10934783 YP_004695840.1 CDS Nit79A3_2679 NC_015731.1 2851499 2852182 D KEGG: scl:sce3476 hypothetical protein; hypothetical protein 2851499..2852182 Nitrosomonas sp. Is79A3 10934784 YP_004695841.1 CDS Nit79A3_2680 NC_015731.1 2852445 2853050 R PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: nit:NAL212_2526 peptidase S24/S26A/S26B, conserved region; peptidase S24/S26A/S26B complement(2852445..2853050) Nitrosomonas sp. Is79A3 10934785 YP_004695842.1 CDS Nit79A3_2682 NC_015731.1 2853619 2853732 D hypothetical protein 2853619..2853732 Nitrosomonas sp. Is79A3 10934787 YP_004695843.1 CDS Nit79A3_2686 NC_015731.1 2854359 2855321 D PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 2854359..2855321 Nitrosomonas sp. Is79A3 10934790 YP_004695844.1 CDS Nit79A3_2687 NC_015731.1 2856728 2856928 R KEGG: nit:NAL212_0154 ATPase, P-type (transporting), HAD superfamily, subfamily IC; hypothetical protein complement(2856728..2856928) Nitrosomonas sp. Is79A3 10934791 YP_004695845.1 CDS Nit79A3_2688 NC_015731.1 2857029 2857583 R PFAM: Methyltransferase type 11; KEGG: nit:NAL212_0155 methyltransferase type 11; type 11 methyltransferase complement(2857029..2857583) Nitrosomonas sp. Is79A3 10934792 YP_004695846.1 CDS Nit79A3_2689 NC_015731.1 2857580 2860726 R KEGG: nit:NAL212_0156 heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; CzcA family heavy metal efflux pump complement(2857580..2860726) Nitrosomonas sp. Is79A3 10934793 YP_004695847.1 CDS Nit79A3_2690 NC_015731.1 2860728 2862320 R TIGRFAM: Secretion protein HlyD; KEGG: nit:NAL212_0157 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit complement(2860728..2862320) Nitrosomonas sp. Is79A3 10934794 YP_004695848.1 CDS Nit79A3_2691 NC_015731.1 2862345 2863691 R PFAM: Outer membrane efflux protein; KEGG: nit:NAL212_0158 outer membrane efflux protein; outer membrane efflux protein complement(2862345..2863691) Nitrosomonas sp. Is79A3 10934795 YP_004695849.1 CDS Nit79A3_2692 NC_015731.1 2863908 2864291 R KEGG: nit:NAL212_0160 hypothetical protein; hypothetical protein complement(2863908..2864291) Nitrosomonas sp. Is79A3 10934796 YP_004695850.1 CDS Nit79A3_2693 NC_015731.1 2864351 2865949 R KEGG: nit:NAL212_0216 TPR repeat-containing protein; TPR repeat-containing protein complement(2864351..2865949) Nitrosomonas sp. Is79A3 10934797 YP_004695851.1 CDS Nit79A3_2694 NC_015731.1 2866024 2866488 R TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: nit:NAL212_0215 transcriptional regulator, MerR family; SMART: HTH transcriptional regulator, MerR; MarR family transcriptional regulator complement(2866024..2866488) Nitrosomonas sp. Is79A3 10934798 YP_004695852.1 CDS Nit79A3_2695 NC_015731.1 2866498 2866974 R KEGG: nit:NAL212_0214 hypothetical protein; hypothetical protein complement(2866498..2866974) Nitrosomonas sp. Is79A3 10934799 YP_004695853.1 CDS Nit79A3_2697 NC_015731.1 2867533 2868348 R PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nmu:Nmul_A0101 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2867533..2868348) Nitrosomonas sp. Is79A3 10934801 YP_004695854.1 CDS Nit79A3_2698 NC_015731.1 2868866 2869738 D PFAM: CoA-binding; KEGG: rfr:Rfer_1518 CoA-binding; CoA-binding domain-containing protein 2868866..2869738 Nitrosomonas sp. Is79A3 10934802 YP_004695855.1 CDS Nit79A3_2699 NC_015731.1 2869742 2870776 D TIGRFAM: RNA 3'-terminal phosphate cyclase, subgroup; HAMAP: RNA 3'-terminal phosphate cyclase predicted; KEGG: nmu:Nmul_A2158 RNA 3'-terminal-phosphate cyclase; PFAM: RNA 3'-terminal phosphate cyclase-like; RNA 3'-terminal phosphate cyclase, insert region; RNA 3'-terminal phosphate cyclase 2869742..2870776 Nitrosomonas sp. Is79A3 10934803 YP_004695856.1 CDS Nit79A3_2700 NC_015731.1 2870779 2871069 D PFAM: Uncharacterised protein family UPF0248; KEGG: tbd:Tbd_1579 hypothetical protein; hypothetical protein 2870779..2871069 Nitrosomonas sp. Is79A3 10934804 YP_004695857.1 CDS Nit79A3_2701 NC_015731.1 2871066 2871635 R KEGG: afr:AFE_2093 hypothetical protein; hypothetical protein complement(2871066..2871635) Nitrosomonas sp. Is79A3 10934805 YP_004695858.1 CDS Nit79A3_2702 NC_015731.1 2871628 2873211 R KEGG: nit:NAL212_0062 transposase IS66; manually curated; PFAM: Transposase, IS66; transposase IS66 complement(2871628..2873211) Nitrosomonas sp. Is79A3 10934806 YP_004695859.1 CDS Nit79A3_2703 NC_015731.1 2873261 2873608 R KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein complement(2873261..2873608) Nitrosomonas sp. Is79A3 10934807 YP_004695860.1 CDS Nit79A3_2704 NC_015731.1 2873599 2873889 R KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein complement(2873599..2873889) Nitrosomonas sp. Is79A3 10934808 YP_004695861.1 CDS Nit79A3_2705 NC_015731.1 2873938 2875068 R PFAM: Transposase, IS4-like; KEGG: bxe:Bxe_C1199 hypothetical protein; transposase IS4 family protein complement(2873938..2875068) Nitrosomonas sp. Is79A3 10934809 YP_004695862.1 CDS Nit79A3_2706 NC_015731.1 2875523 2875921 D KEGG: nmu:Nmul_A0025 TraR/DksA family transcriptional regulator; TraR/DksA family transcriptional regulator 2875523..2875921 Nitrosomonas sp. Is79A3 10934810 YP_004695863.1 CDS Nit79A3_2707 NC_015731.1 2876546 2877094 D PFAM: FecR protein; KEGG: nit:NAL212_1117 FecR protein; anti-FecI sigma factor FecR 2876546..2877094 Nitrosomonas sp. Is79A3 10934811 YP_004695864.1 CDS Nit79A3_2709 NC_015731.1 2877627 2878862 R PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; Sporulation/cell division region, bacteria; KEGG: nit:NAL212_1397 serine-type D-Ala-D-Ala carboxypeptidase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 complement(2877627..2878862) Nitrosomonas sp. Is79A3 10934813 YP_004695865.1 CDS Nit79A3_2710 NC_015731.1 2879355 2881268 D KEGG: gvi:gll0213 hypothetical protein; PFAM: Cell surface receptor IPT/TIG; SMART: Cell surface receptor IPT/TIG; cell surface receptor IPT/TIG domain-containing protein 2879355..2881268 Nitrosomonas sp. Is79A3 10934814 YP_004695866.1 CDS Nit79A3_2711 NC_015731.1 2881722 2882234 D KEGG: neu:NE1865 CheW-like domain-containing protein; PFAM: CheW-like protein; SMART: CheW-like protein; chemotaxis protein CheW 2881722..2882234 Nitrosomonas sp. Is79A3 10934815 YP_004695867.1 CDS Nit79A3_2712 NC_015731.1 2882279 2884006 D KEGG: nit:NAL212_0266 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; methyl-accepting chemotaxis sensory transducer 2882279..2884006 Nitrosomonas sp. Is79A3 10934816 YP_004695868.1 CDS Nit79A3_2713 NC_015731.1 2884619 2885131 D KEGG: neu:NE1865 CheW-like domain-containing protein; PFAM: CheW-like protein; SMART: CheW-like protein; chemotaxis protein CheW 2884619..2885131 Nitrosomonas sp. Is79A3 10934817 YP_004695869.1 CDS Nit79A3_2714 NC_015731.1 2885177 2886901 D KEGG: nit:NAL212_0266 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; methyl-accepting chemotaxis sensory transducer 2885177..2886901 Nitrosomonas sp. Is79A3 10934818 YP_004695870.1 CDS Nit79A3_2715 NC_015731.1 2887779 2888291 D KEGG: nit:NAL212_0265 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; chemotaxis protein CheW 2887779..2888291 Nitrosomonas sp. Is79A3 10934819 YP_004695871.1 CDS Nit79A3_2716 NC_015731.1 2888355 2890091 D KEGG: nit:NAL212_0266 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; methyl-accepting chemotaxis sensory transducer 2888355..2890091 Nitrosomonas sp. Is79A3 10934820 YP_004695872.1 CDS Nit79A3_2717 NC_015731.1 2890163 2890456 D PFAM: Transposase IS3/IS911; KEGG: gca:Galf_0832 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2890163..2890456 Nitrosomonas sp. Is79A3 10934821 YP_004695873.1 CDS Nit79A3_2718 NC_015731.1 2890453 2891331 D PFAM: Integrase, catalytic core; KEGG: rso:RSp0548 ISRSO8-transposase orfB protein; Integrase catalytic subunit 2890453..2891331 Nitrosomonas sp. Is79A3 10934822 YP_004695874.1 CDS Nit79A3_2719 NC_015731.1 2891525 2893252 R KEGG: nit:NAL212_0266 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; methyl-accepting chemotaxis sensory transducer complement(2891525..2893252) Nitrosomonas sp. Is79A3 10934823 YP_004695875.1 CDS Nit79A3_2720 NC_015731.1 2893297 2893809 R KEGG: nit:NAL212_0265 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; chemotaxis protein CheW complement(2893297..2893809) Nitrosomonas sp. Is79A3 10934824 YP_004695876.1 CDS Nit79A3_2721 NC_015731.1 2894223 2894609 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nit:NAL212_0264 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 2894223..2894609 Nitrosomonas sp. Is79A3 10934825 YP_004695877.1 CDS Nit79A3_2722 NC_015731.1 2894614 2895399 R PFAM: Peptidase M48, Ste24p; KEGG: nit:NAL212_0263 peptidase M48 Ste24p; peptidase M48 Ste24p complement(2894614..2895399) Nitrosomonas sp. Is79A3 10934826 YP_004695878.1 CDS Nit79A3_2723 NC_015731.1 2895565 2895771 D PFAM: Dodecin flavoprotein; KEGG: nit:NAL212_0262 hypothetical protein; hypothetical protein 2895565..2895771 Nitrosomonas sp. Is79A3 10934827 YP_004695879.1 CDS Nit79A3_2724 NC_015731.1 2896086 2896322 D KEGG: fbl:Fbal_0566 hypothetical protein; hypothetical protein 2896086..2896322 Nitrosomonas sp. Is79A3 10934828 YP_004695880.1 CDS Nit79A3_2725 NC_015731.1 2896387 2898987 D TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: nit:NAL212_0261 leucyl-tRNA synthetase; leucyl-tRNA synthetase 2896387..2898987 Nitrosomonas sp. Is79A3 10934829 YP_004695881.1 CDS Nit79A3_2726 NC_015731.1 2899005 2899505 D KEGG: nit:NAL212_0260 rare lipoprotein B; rare lipoprotein B 2899005..2899505 Nitrosomonas sp. Is79A3 10934830 YP_004695882.1 CDS Nit79A3_2727 NC_015731.1 2899531 2900571 D KEGG: nit:NAL212_0259 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta 2899531..2900571 Nitrosomonas sp. Is79A3 10934831 YP_004695883.1 CDS Nit79A3_2728 NC_015731.1 2900587 2900823 D hypothetical protein 2900587..2900823 Nitrosomonas sp. Is79A3 10934832 YP_004695884.1 CDS Nit79A3_2729 NC_015731.1 2900763 2901089 D hypothetical protein 2900763..2901089 Nitrosomonas sp. Is79A3 10934833 YP_004695885.1 CDS Nit79A3_2730 NC_015731.1 2901166 2902782 D PFAM: Transposase, IS4-like; KEGG: nit:NAL212_3145 IS5 family transposase; transposase IS4 family protein 2901166..2902782 Nitrosomonas sp. Is79A3 10934834 YP_004695886.1 CDS Nit79A3_2731 NC_015731.1 2902949 2903407 D hypothetical protein 2902949..2903407 Nitrosomonas sp. Is79A3 10934835 YP_004695887.1 CDS Nit79A3_2732 NC_015731.1 2903454 2907164 R KEGG: nit:NAL212_0438 methionine synthase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: Homocysteine S-methyltransferase; Dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12 dependent methionine synthase, activation region; methionine synthase complement(2903454..2907164) Nitrosomonas sp. Is79A3 10934836 YP_004695888.1 CDS Nit79A3_2733 NC_015731.1 2907890 2908705 R TIGRFAM: Zinc finger/thioredoxin KEGG: nit:NAL212_0385 hypothetical protein; hypothetical protein complement(2907890..2908705) Nitrosomonas sp. Is79A3 10934837 YP_004695889.1 CDS Nit79A3_2734 NC_015731.1 2908823 2909740 R TIGRFAM: Ribosomal protein L11 methyltransferase; HAMAP: Ribosomal protein L11 methyltransferase; KEGG: nit:NAL212_0384 50S ribosomal protein L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase; 50S ribosomal protein L11 methyltransferase complement(2908823..2909740) Nitrosomonas sp. Is79A3 10934838 YP_004695890.1 CDS Nit79A3_2735 NC_015731.1 2909794 2911149 R KEGG: nit:NAL212_0383 acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; acetyl-CoA carboxylase, biotin carboxylase complement(2909794..2911149) Nitrosomonas sp. Is79A3 10934839 YP_004695891.1 CDS Nit79A3_2736 NC_015731.1 2911175 2911657 R KEGG: nit:NAL212_0382 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin/lipoyl attachment; acetyl-CoA carboxylase, biotin carboxyl carrier protein complement(2911175..2911657) Nitrosomonas sp. Is79A3 10934840 YP_004695892.1 CDS Nit79A3_2737 NC_015731.1 2911808 2912260 R TIGRFAM: Dehydroquinase, class II; HAMAP: Dehydroquinase, class II; KEGG: nit:NAL212_0381 3-dehydroquinate dehydratase, type II; PFAM: Dehydroquinase, class II; 3-dehydroquinate dehydratase complement(2911808..2912260) Nitrosomonas sp. Is79A3 10934841 YP_004695893.1 CDS Nit79A3_2738 NC_015731.1 2912707 2913618 R PFAM: Restriction endonuclease, type IV-like, Mrr; KEGG: hse:Hsero_1214 5-methylcytosine-specific restriction endonuclease; restriction endonuclease complement(2912707..2913618) Nitrosomonas sp. Is79A3 10934843 YP_004695894.1 CDS Nit79A3_2739 NC_015731.1 2913903 2914973 D PFAM: Integrase, catalytic core, phage; KEGG: lpp:lpp2123 hypothetical protein; integrase 2913903..2914973 Nitrosomonas sp. Is79A3 10934844 YP_004695895.1 CDS Nit79A3_2740 NC_015731.1 2914982 2915911 D hypothetical protein 2914982..2915911 Nitrosomonas sp. Is79A3 10934845 YP_004695896.1 CDS Nit79A3_2741 NC_015731.1 2916041 2916328 D KEGG: noc:Noc_0050 hypothetical protein; hypothetical protein 2916041..2916328 Nitrosomonas sp. Is79A3 10934846 YP_004695897.1 CDS Nit79A3_2744 NC_015731.1 2917640 2918944 D PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 2917640..2918944 Nitrosomonas sp. Is79A3 10934849 YP_004695898.1 CDS Nit79A3_2745 NC_015731.1 2920440 2920700 D KEGG: ctt:CtCNB1_2990 hypothetical protein; hypothetical protein 2920440..2920700 Nitrosomonas sp. Is79A3 10934850 YP_004695899.1 CDS Nit79A3_2746 NC_015731.1 2920697 2920903 D hypothetical protein 2920697..2920903 Nitrosomonas sp. Is79A3 10934851 YP_004695900.1 CDS Nit79A3_2747 NC_015731.1 2921301 2921591 D KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein 2921301..2921591 Nitrosomonas sp. Is79A3 10934852 YP_004695901.1 CDS Nit79A3_2748 NC_015731.1 2921582 2921929 D KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein 2921582..2921929 Nitrosomonas sp. Is79A3 10934853 YP_004695902.1 CDS Nit79A3_2749 NC_015731.1 2921979 2923562 D KEGG: nit:NAL212_0062 transposase IS66; manually curated; PFAM: Transposase, IS66; transposase IS66 2921979..2923562 Nitrosomonas sp. Is79A3 10934854 YP_004695903.1 CDS Nit79A3_2750 NC_015731.1 2924000 2924836 R KEGG: hypothetical protein; hypothetical protein complement(2924000..2924836) Nitrosomonas sp. Is79A3 10934855 YP_004695904.1 CDS Nit79A3_2751 NC_015731.1 2925030 2926547 R hypothetical protein complement(2925030..2926547) Nitrosomonas sp. Is79A3 10934856 YP_004695905.1 CDS Nit79A3_2752 NC_015731.1 2926880 2927485 R KEGG: pph:Ppha_0795 hypothetical protein; hypothetical protein complement(2926880..2927485) Nitrosomonas sp. Is79A3 10934857 YP_004695906.1 CDS Nit79A3_2753 NC_015731.1 2928006 2929172 R PFAM: Transposase, IS4-like; KEGG: dar:Daro_2223 transposase IS4; transposase IS4 family protein complement(2928006..2929172) Nitrosomonas sp. Is79A3 10934858 YP_004695907.1 CDS Nit79A3_2754 NC_015731.1 2929366 2929746 D hypothetical protein 2929366..2929746 Nitrosomonas sp. Is79A3 10934859 YP_004695908.1 CDS Nit79A3_2755 NC_015731.1 2929824 2930144 R KEGG: nit:NAL212_1538 hypothetical protein; hypothetical protein complement(2929824..2930144) Nitrosomonas sp. Is79A3 10934860 YP_004695909.1 CDS Nit79A3_2756 NC_015731.1 2930629 2930781 R hypothetical protein complement(2930629..2930781) Nitrosomonas sp. Is79A3 10934861 YP_004695910.1 CDS Nit79A3_2757 NC_015731.1 2931011 2931658 R KEGG: rsl:RPSI07_mp0498 cob(II)yrinic acid a,c-diamide reductase (blub); TIGRFAM: Cob(II)yrinic acid a,c-diamide reductase; PFAM: Nitroreductase-like; cob(II)yrinic acid a,c-diamide reductase complement(2931011..2931658) Nitrosomonas sp. Is79A3 10934862 YP_004695911.1 CDS Nit79A3_2758 NC_015731.1 2931945 2932388 R KEGG: nit:NAL212_2432 hypothetical protein; hypothetical protein complement(2931945..2932388) Nitrosomonas sp. Is79A3 10934863 YP_004695912.1 CDS Nit79A3_2759 NC_015731.1 2933308 2933547 D hypothetical protein 2933308..2933547 Nitrosomonas sp. Is79A3 10934864 YP_004695913.1 CDS Nit79A3_2760 NC_015731.1 2933554 2933754 R hypothetical protein complement(2933554..2933754) Nitrosomonas sp. Is79A3 10934865 YP_004695914.1 CDS Nit79A3_2761 NC_015731.1 2933902 2934144 D hypothetical protein 2933902..2934144 Nitrosomonas sp. Is79A3 10934866 YP_004695915.1 CDS Nit79A3_2762 NC_015731.1 2934275 2934973 R KEGG: YecA family protein; TIGRFAM: YgfB/YecA protein; PFAM: SEC-C motif; hypothetical protein complement(2934275..2934973) Nitrosomonas sp. Is79A3 10934867 YP_004695916.1 CDS Nit79A3_2763 NC_015731.1 2934999 2935331 R PFAM: Helix-turn-helix type 3; KEGG: nit:NAL212_0368 helix-turn-helix domain-containing protein; helix-turn-helix domain-containing protein complement(2934999..2935331) Nitrosomonas sp. Is79A3 10934868 YP_004695917.1 CDS Nit79A3_2766 NC_015731.1 2936524 2937558 R KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase complement(2936524..2937558) Nitrosomonas sp. Is79A3 10934871 YP_004695918.1 CDS Nit79A3_2767 NC_015731.1 2937727 2938704 D KEGG: neu:NE0744 hypothetical protein; hypothetical protein 2937727..2938704 Nitrosomonas sp. Is79A3 10934872 YP_004695919.1 CDS Nit79A3_2768 NC_015731.1 2938759 2939466 R KEGG: lch:Lcho_2324 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(2938759..2939466) Nitrosomonas sp. Is79A3 10934873 YP_004695920.1 CDS Nit79A3_2769 NC_015731.1 2939805 2940311 R KEGG: cyj:Cyan7822_2864 hypothetical protein; hypothetical protein complement(2939805..2940311) Nitrosomonas sp. Is79A3 10934874 YP_004695921.1 CDS Nit79A3_2770 NC_015731.1 2940397 2940780 R KEGG: nit:NAL212_1188 hypothetical protein; hypothetical protein complement(2940397..2940780) Nitrosomonas sp. Is79A3 10934875 YP_004695922.1 CDS Nit79A3_2771 NC_015731.1 2940805 2941017 R KEGG: nit:NAL212_1187 hypothetical protein; hypothetical protein complement(2940805..2941017) Nitrosomonas sp. Is79A3 10934876 YP_004695923.1 CDS Nit79A3_2773 NC_015731.1 2942006 2942377 R PFAM: Protein of unknown function DUF202; KEGG: gpb:HDN1F_14580 protein of unknown function DUF202; hypothetical protein complement(2942006..2942377) Nitrosomonas sp. Is79A3 10934878 YP_004695924.1 CDS Nit79A3_2774 NC_015731.1 2942693 2943331 R KEGG: nit:NAL212_1181 hypothetical protein; hypothetical protein complement(2942693..2943331) Nitrosomonas sp. Is79A3 10934879 YP_004695925.1 CDS Nit79A3_2775 NC_015731.1 2943379 2943669 R KEGG: nit:NAL212_1180 hypothetical protein; hypothetical protein complement(2943379..2943669) Nitrosomonas sp. Is79A3 10934880 YP_004695926.1 CDS Nit79A3_2776 NC_015731.1 2943723 2944832 R PFAM: Lipase, class 3; KEGG: ppr:PBPRA1385 hypothetical protein; lipase class 3 complement(2943723..2944832) Nitrosomonas sp. Is79A3 10934881 YP_004695927.1 CDS Nit79A3_2777 NC_015731.1 2945067 2945738 R TIGRFAM: Dethiobiotin synthase; HAMAP: Dethiobiotin synthase; KEGG: nit:NAL212_1178 dethiobiotin synthase; PFAM: Cobyrinic acid a,c-diamide synthase; Dethiobiotin synthetase complement(2945067..2945738) Nitrosomonas sp. Is79A3 10934882 YP_004695928.1 CDS Nit79A3_2778 NC_015731.1 2945749 2946630 R KEGG: nit:NAL212_1177 biotin biosynthesis protein BioC; TIGRFAM: Biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; biotin biosynthesis protein BioC complement(2945749..2946630) Nitrosomonas sp. Is79A3 10934883 YP_004695929.1 CDS Nit79A3_2779 NC_015731.1 2946608 2947378 R TIGRFAM: BioH; HAMAP: Carboxylesterase bioH; KEGG: nit:NAL212_1176 BioH protein; PFAM: Alpha/beta hydrolase fold-1; Carboxylesterase bioH complement(2946608..2947378) Nitrosomonas sp. Is79A3 10934884 YP_004695930.1 CDS Nit79A3_2780 NC_015731.1 2947375 2948541 R TIGRFAM: 8-amino-7-oxononanoate synthase; HAMAP: 8-amino-7-oxononanoate synthase; KEGG: nit:NAL212_1175 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/II; 8-amino-7-oxononanoate synthase complement(2947375..2948541) Nitrosomonas sp. Is79A3 10934885 YP_004695931.1 CDS Nit79A3_2781 NC_015731.1 2948545 2949549 R SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Biotin synthase; KEGG: nit:NAL212_1174 biotin synthase; HAMAP: Biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; Biotin synthase complement(2948545..2949549) Nitrosomonas sp. Is79A3 10934886 YP_004695932.1 CDS Nit79A3_2782 NC_015731.1 2949681 2950376 D PFAM: Phosphoribosyltransferase; KEGG: nit:NAL212_1173 phosphoribosyltransferase; phosphoribosyltransferase 2949681..2950376 Nitrosomonas sp. Is79A3 10934887 YP_004695933.1 CDS Nit79A3_2783 NC_015731.1 2950402 2950866 D PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: nit:NAL212_1172 RNA methyltransferase, TrmH family, group 2; tRNA/rRNA methyltransferase SpoU 2950402..2950866 Nitrosomonas sp. Is79A3 10934888 YP_004695934.1 CDS Nit79A3_2784 NC_015731.1 2950874 2952970 R KEGG: nit:NAL212_1171 type IV pilus secretin PilQ; TIGRFAM: Type IV pilus secretin PilQ; PFAM: Type II/III secretion system; Secretin/TonB, short N-terminal; type IV pilus secretin PilQ complement(2950874..2952970) Nitrosomonas sp. Is79A3 10934889 YP_004695935.1 CDS Nit79A3_2785 NC_015731.1 2952981 2953499 R PFAM: Pilus assembly protein PilP; KEGG: nit:NAL212_1170 pilus assembly protein PilP; Pilus assembly protein PilP complement(2952981..2953499) Nitrosomonas sp. Is79A3 10934890 YP_004695936.1 CDS Nit79A3_2786 NC_015731.1 2953503 2954117 R PFAM: Pilus assembly protein, PilO; KEGG: nit:NAL212_1169 fimbrial type-4 assembly membrane transmembrane protein; Pilus assembly protein PilO complement(2953503..2954117) Nitrosomonas sp. Is79A3 10934891 YP_004695937.1 CDS Nit79A3_2787 NC_015731.1 2954131 2954721 R PFAM: Fimbrial assembly; KEGG: nit:NAL212_1168 fimbrial assembly family protein; Fimbrial assembly family protein complement(2954131..2954721) Nitrosomonas sp. Is79A3 10934892 YP_004695938.1 CDS Nit79A3_2788 NC_015731.1 2954718 2955821 R TIGRFAM: Type IV pilus assembly protein PilM; KEGG: nit:NAL212_1167 type IV pilus assembly protein PilM; type IV pilus assembly protein PilM complement(2954718..2955821) Nitrosomonas sp. Is79A3 10934893 YP_004695939.1 CDS Nit79A3_2789 NC_015731.1 2956045 2958363 D KEGG: nit:NAL212_1166 penicillin-binding protein, 1A family; TIGRFAM: Penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; penicillin-binding protein, 1A family 2956045..2958363 Nitrosomonas sp. Is79A3 10934894 YP_004695940.1 CDS Nit79A3_2790 NC_015731.1 2958396 2959361 R PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; KEGG: nit:NAL212_1165 porphobilinogen synthase; delta-aminolevulinic acid dehydratase complement(2958396..2959361) Nitrosomonas sp. Is79A3 10934895 YP_004695941.1 CDS Nit79A3_2791 NC_015731.1 2959616 2960212 R TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC; KEGG: nit:NAL212_1164 ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein engB complement(2959616..2960212) Nitrosomonas sp. Is79A3 10934896 YP_004695942.1 CDS Nit79A3_2792 NC_015731.1 2960246 2960980 R TIGRFAM: Bordetella pertussis Bvg accessory factor; HAMAP: Type III pantothenate kinase; KEGG: nit:NAL212_1163 transcriptional acitvator, Baf family; PFAM: Bordetella pertussis Bvg accessory factor; transcriptional acitvator, Baf family complement(2960246..2960980) Nitrosomonas sp. Is79A3 10934897 YP_004695943.1 CDS Nit79A3_2793 NC_015731.1 2960988 2961977 R KEGG: nit:NAL212_1162 biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11; Biotin protein ligase, C-terminal; biotin/acetyl-CoA-carboxylase ligase complement(2960988..2961977) Nitrosomonas sp. Is79A3 10934898 YP_004695944.1 CDS Nit79A3_2794 NC_015731.1 2962075 2962470 R TIGRFAM: Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; KEGG: nit:NAL212_1161 50S ribosomal protein L17; PFAM: Ribosomal protein L17; 50S ribosomal protein L17 complement(2962075..2962470) Nitrosomonas sp. Is79A3 10934899 YP_004695945.1 CDS Nit79A3_2795 NC_015731.1 2962457 2963461 R SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; KEGG: nit:NAL212_1160 DNA-directed RNA polymerase, alpha subunit; HAMAP: DNA-directed RNA polymerase, alpha subunit; PFAM: DNA-directed RNA polymerase, insert; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal; DNA-directed RNA polymerase subunit alpha complement(2962457..2963461) Nitrosomonas sp. Is79A3 10934900 YP_004695946.1 CDS Nit79A3_2796 NC_015731.1 2963504 2964175 R TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: Ribosomal protein S4; RNA-binding S4; KEGG: nit:NAL212_1159 30S ribosomal protein S4; SMART: RNA-binding S4; 30S ribosomal protein S4 complement(2963504..2964175) Nitrosomonas sp. Is79A3 10934901 YP_004695947.1 CDS Nit79A3_2797 NC_015731.1 2964141 2964530 R KEGG: nit:NAL212_1158 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; PFAM: Ribosomal protein S11; 30S ribosomal protein S11 complement(2964141..2964530) Nitrosomonas sp. Is79A3 10934902 YP_004695948.1 CDS Nit79A3_2798 NC_015731.1 2964581 2964940 R KEGG: nit:NAL212_1157 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13; 30S ribosomal protein S13 complement(2964581..2964940) Nitrosomonas sp. Is79A3 10934903 YP_004695949.1 CDS Nit79A3_2799 NC_015731.1 2964979 2965092 R PFAM: Ribosomal protein L36; manually curated; TIGRFAM: Ribosomal protein L36; KEGG: ftn:FTN_0260 50S ribosomal protein L36; HAMAP: Ribosomal protein L36; 50S ribosomal protein L36 complement(2964979..2965092) Nitrosomonas sp. Is79A3 10934904 YP_004695950.1 CDS Nit79A3_2800 NC_015731.1 2965152 2965370 R TIGRFAM: Translation initiation factor IF-1; HAMAP: Translation initiation factor IF-1; KEGG: nit:NAL212_1156 translation initiation factor IF-1; PFAM: S1, IF1 type; Translation initiation factor IF-1 complement(2965152..2965370) Nitrosomonas sp. Is79A3 10934905 YP_004695951.1 CDS Nit79A3_2801 NC_015731.1 2965388 2966719 R KEGG: nit:NAL212_1155 preprotein translocase, SecY subunit; TIGRFAM: SecY protein; PFAM: SecY protein; preprotein translocase subunit SecY complement(2965388..2966719) Nitrosomonas sp. Is79A3 10934906 YP_004695952.1 CDS Nit79A3_2802 NC_015731.1 2966737 2967168 R KEGG: nit:NAL212_1154 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; PFAM: Ribosomal protein L15; 50S ribosomal protein L15 complement(2966737..2967168) Nitrosomonas sp. Is79A3 10934907 YP_004695953.1 CDS Nit79A3_2803 NC_015731.1 2967170 2967358 R KEGG: dia:Dtpsy_0391 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30p/L7e, conserved region; 50S ribosomal protein L30 complement(2967170..2967358) Nitrosomonas sp. Is79A3 10934908 YP_004695954.1 CDS Nit79A3_2804 NC_015731.1 2967351 2967893 R KEGG: nit:NAL212_1152 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, C-terminal; Ribosomal protein S5, N-terminal; 30S ribosomal protein S5 complement(2967351..2967893) Nitrosomonas sp. Is79A3 10934909 YP_004695955.1 CDS Nit79A3_2805 NC_015731.1 2967908 2968264 R KEGG: nit:NAL212_1151 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal protein L18/L5; 50S ribosomal protein L18 complement(2967908..2968264) Nitrosomonas sp. Is79A3 10934910 YP_004695956.1 CDS Nit79A3_2806 NC_015731.1 2968276 2968815 R KEGG: nit:NAL212_1150 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6, alpha-beta domain; 50S ribosomal protein L6 complement(2968276..2968815) Nitrosomonas sp. Is79A3 10934911 YP_004695957.1 CDS Nit79A3_2807 NC_015731.1 2968832 2969227 R PFAM: Ribosomal protein S8; KEGG: nmu:Nmul_A0781 ribosomal protein S8; 30S ribosomal protein S8 complement(2968832..2969227) Nitrosomonas sp. Is79A3 10934912 YP_004695958.1 CDS Nit79A3_2808 NC_015731.1 2969318 2969623 R KEGG: nit:NAL212_1148 30S ribosomal protein S14; HAMAP: 30S ribosomal protein S14; PFAM: Ribosomal protein S14; 30S ribosomal protein S14 complement(2969318..2969623) Nitrosomonas sp. Is79A3 10934913 YP_004695959.1 CDS Nit79A3_2809 NC_015731.1 2969633 2970172 R PFAM: Ribosomal protein L5; KEGG: nit:NAL212_1147 50S ribosomal protein L5; 50S ribosomal protein L5 complement(2969633..2970172) Nitrosomonas sp. Is79A3 10934914 YP_004695960.1 CDS Nit79A3_2810 NC_015731.1 2970190 2970507 R KEGG: nit:NAL212_1146 50S ribosomal protein L24; TIGRFAM: Ribosomal protein L24; SMART: KOW; 50S ribosomal protein L24 complement(2970190..2970507) Nitrosomonas sp. Is79A3 10934915 YP_004695961.1 CDS Nit79A3_2811 NC_015731.1 2970527 2970895 R manually curated; TIGRFAM: Ribosomal protein L14, bacterial-type; KEGG: nit:NAL212_1145 50S ribosomal protein L14; PFAM: Ribosomal protein L14b/L23e; 50S ribosomal protein L14 complement(2970527..2970895) Nitrosomonas sp. Is79A3 10934916 YP_004695962.1 CDS Nit79A3_2812 NC_015731.1 2971073 2971336 R KEGG: nit:NAL212_1144 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17; 30S ribosomal protein S17 complement(2971073..2971336) Nitrosomonas sp. Is79A3 10934917 YP_004695963.1 CDS Nit79A3_2813 NC_015731.1 2971329 2971526 R KEGG: nit:NAL212_1143 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29; 50S ribosomal protein L29 complement(2971329..2971526) Nitrosomonas sp. Is79A3 10934918 YP_004695964.1 CDS Nit79A3_2814 NC_015731.1 2971529 2971945 R TIGRFAM: Ribosomal protein L16; HAMAP: Ribosomal protein L16; KEGG: nit:NAL212_1142 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; 50S ribosomal protein L16 complement(2971529..2971945) Nitrosomonas sp. Is79A3 10934919 YP_004695965.1 CDS Nit79A3_2815 NC_015731.1 2971929 2972723 R TIGRFAM: Ribosomal protein S3, bacterial; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; KEGG: nit:NAL212_1141 30S ribosomal protein S3; SMART: K Homology; 30S ribosomal protein S3 complement(2971929..2972723) Nitrosomonas sp. Is79A3 10934920 YP_004695966.1 CDS Nit79A3_2816 NC_015731.1 2972738 2973085 R KEGG: nmu:Nmul_A0772 ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22/L17; 50S ribosomal protein L22 complement(2972738..2973085) Nitrosomonas sp. Is79A3 10934921 YP_004695967.1 CDS Nit79A3_2817 NC_015731.1 2973095 2973376 R KEGG: nit:NAL212_1139 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19/S15; 30S ribosomal protein S19 complement(2973095..2973376) Nitrosomonas sp. Is79A3 10934922 YP_004695968.1 CDS Nit79A3_2818 NC_015731.1 2973384 2974217 R KEGG: nit:NAL212_1138 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal protein L2; 50S ribosomal protein L2 complement(2973384..2974217) Nitrosomonas sp. Is79A3 10934923 YP_004695969.1 CDS Nit79A3_2819 NC_015731.1 2974217 2974552 R PFAM: Ribosomal protein L25/L23; KEGG: nit:NAL212_1137 50S ribosomal protein L25/L23; 50S ribosomal protein L25 complement(2974217..2974552) Nitrosomonas sp. Is79A3 10934924 YP_004695970.1 CDS Nit79A3_2820 NC_015731.1 2974549 2975169 R PFAM: Ribosomal protein L4/L1e; KEGG: nit:NAL212_1136 50S ribosomal protein L4/L1e; 50S ribosomal protein L4 complement(2974549..2975169) Nitrosomonas sp. Is79A3 10934925 YP_004695971.1 CDS Nit79A3_2821 NC_015731.1 2975202 2975849 R KEGG: nit:NAL212_1135 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3; 50S ribosomal protein L3 complement(2975202..2975849) Nitrosomonas sp. Is79A3 10934926 YP_004695972.1 CDS Nit79A3_2822 NC_015731.1 2975938 2976246 R TIGRFAM: Ribosomal protein S10, bacterial; HAMAP: 30S ribosomal protein S10; KEGG: neu:NE0400 30S ribosomal protein S10; PFAM: Ribosomal protein S10; 30S ribosomal protein S10 complement(2975938..2976246) Nitrosomonas sp. Is79A3 10934927 YP_004695973.1 CDS Nit79A3_2823 NC_015731.1 2976317 2977507 R KEGG: nit:NAL212_2147 translation elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; translation elongation factor Tu complement(2976317..2977507) Nitrosomonas sp. Is79A3 10934928 YP_004695974.1 CDS Nit79A3_2824 NC_015731.1 2977539 2979629 R KEGG: nit:NAL212_1132 translation elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; translation elongation factor G complement(2977539..2979629) Nitrosomonas sp. Is79A3 10934929 YP_004695975.1 CDS Nit79A3_2825 NC_015731.1 2979691 2980161 R KEGG: nit:NAL212_1131 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7; 30S ribosomal protein S7 complement(2979691..2980161) Nitrosomonas sp. Is79A3 10934930 YP_004695976.1 CDS Nit79A3_2826 NC_015731.1 2980226 2980603 R KEGG: nit:NAL212_1130 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacterial-type; PFAM: Ribosomal protein S12/S23; 30S ribosomal protein S12 complement(2980226..2980603) Nitrosomonas sp. Is79A3 10934931 YP_004695977.1 CDS Nit79A3_2827 NC_015731.1 2980863 2981348 R KEGG: nit:NAL212_1129 hypothetical protein; HAMAP: UPF0234 protein yajQ; PFAM: Protein of unknown function DUF520; hypothetical protein complement(2980863..2981348) Nitrosomonas sp. Is79A3 10934932 YP_004695978.1 CDS Nit79A3_2828 NC_015731.1 2981408 2982634 R TIGRFAM: Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; KEGG: nit:NAL212_1128 argininosuccinate synthase; PFAM: Argininosuccinate synthase; argininosuccinate synthase complement(2981408..2982634) Nitrosomonas sp. Is79A3 10934933 YP_004695979.1 CDS Nit79A3_2829 NC_015731.1 2982695 2983621 R TIGRFAM: Ornithine carbamoyltransferase; HAMAP: Ornithine carbamoyltransferase; KEGG: nit:NAL212_1127 ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; Ornithine carbamoyltransferase complement(2982695..2983621) Nitrosomonas sp. Is79A3 10934934 YP_004695980.1 CDS Nit79A3_2830 NC_015731.1 2983669 2984829 R TIGRFAM: Acetylornithine/succinylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: nit:NAL212_1126 acetylornithine and succinylornithine aminotransferase; PFAM: Aminotransferase class-III; Acetylornithine/succinyldiaminopimelate aminotransferase complement(2983669..2984829) Nitrosomonas sp. Is79A3 10934935 YP_004695981.1 CDS Nit79A3_2831 NC_015731.1 2985121 2987691 D TIGRFAM: DNA gyrase, subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; KEGG: nit:NAL212_1125 DNA gyrase, A subunit; SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase subunit A 2985121..2987691 Nitrosomonas sp. Is79A3 10934936 YP_004695982.1 CDS Nit79A3_2832 NC_015731.1 2987749 2988840 D TIGRFAM: Phosphoserine aminotransferase; HAMAP: Phosphoserine aminotransferase; KEGG: nit:NAL212_1124 phosphoserine aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase; Phosphoserine aminotransferase 2987749..2988840 Nitrosomonas sp. Is79A3 10934937 YP_004695983.1 CDS Nit79A3_2833 NC_015731.1 2988833 2990029 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; KEGG: nit:NAL212_1123 phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 2988833..2990029 Nitrosomonas sp. Is79A3 10934938 YP_004695984.1 CDS Nit79A3_2834 NC_015731.1 2990077 2991147 D KEGG: nit:NAL212_1122 chorismate mutase; TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT; chorismate mutase 2990077..2991147 Nitrosomonas sp. Is79A3 10934939 YP_004695985.1 CDS Nit79A3_2835 NC_015731.1 2991232 2992350 D TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: nit:NAL212_1121 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/II; Histidinol-phosphate aminotransferase 2991232..2992350 Nitrosomonas sp. Is79A3 10934940 YP_004695986.1 CDS Nit79A3_2836 NC_015731.1 2992347 2993363 D KEGG: nmu:Nmul_A2194 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 2992347..2993363 Nitrosomonas sp. Is79A3 10934941 YP_004695987.1 CDS Nit79A3_2837 NC_015731.1 2993385 2994272 D PFAM: Prephenate dehydrogenase; KEGG: nit:NAL212_1120 prephenate dehydrogenase; Prephenate dehydrogenase 2993385..2994272 Nitrosomonas sp. Is79A3 10934942 YP_004695988.1 CDS Nit79A3_2838 NC_015731.1 2994363 2994575 D hypothetical protein 2994363..2994575 Nitrosomonas sp. Is79A3 10934943 YP_004695989.1 CDS Nit79A3_2839 NC_015731.1 2994867 2995664 D KEGG: nit:NAL212_1119 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 2994867..2995664 Nitrosomonas sp. Is79A3 10934944 YP_004695990.1 CDS Nit79A3_2840 NC_015731.1 2996096 3000127 D SMART: Diguanylate phosphodiesterase, predicted; MCP methyltransferase, CheR-type; PAC motif; Diguanylate cyclase, predicted; TIGRFAM: Diguanylate cyclase, predicted; PAS; KEGG: nit:NAL212_2095 diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; MCP methyltransferase, CheR-type; PAS fold-3; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2996096..3000127 Nitrosomonas sp. Is79A3 10934945 YP_004695991.1 CDS Nit79A3_2841 NC_015731.1 3000224 3000523 R KEGG: nit:NAL212_1407 hypothetical protein; hypothetical protein complement(3000224..3000523) Nitrosomonas sp. Is79A3 10934946 YP_004695992.1 CDS Nit79A3_2842 NC_015731.1 3000639 3001616 R PFAM: Insertion element protein; KEGG: neu:NE0744 hypothetical protein; Insertion element protein complement(3000639..3001616) Nitrosomonas sp. Is79A3 10934947 YP_004695993.1 CDS Nit79A3_2843 NC_015731.1 3001869 3002903 R KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase complement(3001869..3002903) Nitrosomonas sp. Is79A3 10934948 YP_004695994.1 CDS Nit79A3_2844 NC_015731.1 3003186 3003539 D PFAM: Sulphur relay, DsrE-like protein; KEGG: nhl:Nhal_2753 DsrE family protein; DsrE family protein 3003186..3003539 Nitrosomonas sp. Is79A3 10934949 YP_004695995.1 CDS Nit79A3_2845 NC_015731.1 3003805 3004584 D KEGG: nmu:Nmul_A0910 hypothetical protein; hypothetical protein 3003805..3004584 Nitrosomonas sp. Is79A3 10934950 YP_004695996.1 CDS Nit79A3_2846 NC_015731.1 3004581 3006053 D PFAM: ATP-grasp fold, RimK-type; KEGG: tbd:Tbd_1453 glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase); RimK domain-containing protein ATP-grasp 3004581..3006053 Nitrosomonas sp. Is79A3 10934951 YP_004695997.1 CDS Nit79A3_2847 NC_015731.1 3006050 3007300 D PFAM: Glutamate--cysteine ligase, GCS2; KEGG: nmu:Nmul_A0909 glutamate--cysteine ligase, GCS2; glutamate--cysteine ligase GCS2 3006050..3007300 Nitrosomonas sp. Is79A3 10934952 YP_004695998.1 CDS Nit79A3_2848 NC_015731.1 3007317 3008024 D PFAM: N-formylglutamate amidohydrolase; KEGG: nmu:Nmul_A0908 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 3007317..3008024 Nitrosomonas sp. Is79A3 10934953 YP_004695999.1 CDS Nit79A3_2849 NC_015731.1 3008093 3008611 D KEGG: nit:NAL212_1591 methionine-R-sulfoxide reductase; TIGRFAM: Methionine sulphoxide reductase B; PFAM: Methionine sulphoxide reductase B; methionine-R-sulfoxide reductase 3008093..3008611 Nitrosomonas sp. Is79A3 10934954 YP_004696000.1 CDS Nit79A3_2850 NC_015731.1 3008642 3009193 R PFAM: Lipid A 3-O-deacylase-related; KEGG: hdn:Hden_3314 lipid A 3-O-deacylase-related protein; Lipid A 3-O-deacylase-like protein complement(3008642..3009193) Nitrosomonas sp. Is79A3 10934955 YP_004696001.1 CDS Nit79A3_2851 NC_015731.1 3009591 3010361 R SMART: Toll-Interleukin receptor; KEGG: gca:Galf_1496 TIR protein; TIR protein complement(3009591..3010361) Nitrosomonas sp. Is79A3 10934956 YP_004696002.1 CDS Nit79A3_2852 NC_015731.1 3010637 3011176 R PFAM: SNARE associated Golgi protein; KEGG: ppw:PputW619_5041 hypothetical protein; hypothetical protein complement(3010637..3011176) Nitrosomonas sp. Is79A3 10934957 YP_004696003.1 CDS Nit79A3_2853 NC_015731.1 3011198 3012547 R TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: nit:NAL212_0582 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(3011198..3012547) Nitrosomonas sp. Is79A3 10934958 YP_004696004.1 CDS Nit79A3_2854 NC_015731.1 3012647 3013360 R PFAM: Carbonic anhydrase; KEGG: sku:Sulku_0484 carbonic anhydrase; carbonic anhydrase complement(3012647..3013360) Nitrosomonas sp. Is79A3 10934959 YP_004696005.1 CDS Nit79A3_2855 NC_015731.1 3013662 3014351 D PFAM: Protein of unknown function DUF125, transmembrane; KEGG: nit:NAL212_1328 hypothetical protein; hypothetical protein 3013662..3014351 Nitrosomonas sp. Is79A3 10934960 YP_004696006.1 CDS Nit79A3_2856 NC_015731.1 3014399 3014761 R KEGG: nit:NAL212_1327 hypothetical protein; hypothetical protein complement(3014399..3014761) Nitrosomonas sp. Is79A3 10934961 YP_004696007.1 CDS Nit79A3_2857 NC_015731.1 3014843 3015256 R KEGG: glo:Glov_2674 hypothetical protein; hypothetical protein complement(3014843..3015256) Nitrosomonas sp. Is79A3 10934962 YP_004696008.1 CDS Nit79A3_2858 NC_015731.1 3015335 3015847 R PFAM: Domain of unknown function DUF1993; KEGG: nit:NAL212_1326 hypothetical protein; hypothetical protein complement(3015335..3015847) Nitrosomonas sp. Is79A3 10934963 YP_004696009.1 CDS Nit79A3_2859 NC_015731.1 3016082 3016903 D KEGG: sbp:Sbal223_2521 hypothetical protein; hypothetical protein 3016082..3016903 Nitrosomonas sp. Is79A3 10934964 YP_004696010.1 CDS Nit79A3_2860 NC_015731.1 3016900 3017820 D KEGG: she:Shewmr4_1552 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 3016900..3017820 Nitrosomonas sp. Is79A3 10934965 YP_004696011.1 CDS Nit79A3_2861 NC_015731.1 3018013 3019761 R PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-4; KEGG: nit:NAL212_1928 hypothetical protein; hypothetical protein complement(3018013..3019761) Nitrosomonas sp. Is79A3 10934966 YP_004696012.1 CDS Nit79A3_2862 NC_015731.1 3019821 3020099 R KEGG: nit:NAL212_1929 hypothetical protein; hypothetical protein complement(3019821..3020099) Nitrosomonas sp. Is79A3 10934967 YP_004696013.1 CDS Nit79A3_2863 NC_015731.1 3020302 3020898 R PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nit:NAL212_1930 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3020302..3020898) Nitrosomonas sp. Is79A3 10934968 YP_004696014.1 CDS Nit79A3_2864 NC_015731.1 3021140 3022660 D KEGG: cch:Cag_0529 hypothetical protein; hypothetical protein 3021140..3022660 Nitrosomonas sp. Is79A3 10934969 YP_004696015.1 CDS Nit79A3_2865 NC_015731.1 3022876 3024198 D PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; GCN5-related N-acetyltransferase; KEGG: nit:NAL212_2071 hypothetical protein; hypothetical protein 3022876..3024198 Nitrosomonas sp. Is79A3 10934970 YP_004696016.1 CDS Nit79A3_2866 NC_015731.1 3024535 3025047 D KEGG: nit:NAL212_1933 hypothetical protein; hypothetical protein 3024535..3025047 Nitrosomonas sp. Is79A3 10934971 YP_004696017.1 CDS Nit79A3_2867 NC_015731.1 3025056 3025625 D KEGG: net:Neut_1937 hypothetical protein; hypothetical protein 3025056..3025625 Nitrosomonas sp. Is79A3 10934972 YP_004696018.1 CDS Nit79A3_2868 NC_015731.1 3025807 3027036 D KEGG: nit:NAL212_1934 response regulator receiver modulated diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region; SMART: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate phosphodiesterase 3025807..3027036 Nitrosomonas sp. Is79A3 10934973 YP_004696019.1 CDS Nit79A3_2869 NC_015731.1 3027081 3030824 R TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; PAS fold; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: nit:NAL212_1379 multi-sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; PAS; Signal transduction response regulator, receiver region; multi-sensor hybrid histidine kinase complement(3027081..3030824) Nitrosomonas sp. Is79A3 10934974 YP_004696020.1 CDS Nit79A3_2870 NC_015731.1 3031199 3032506 D KEGG: nit:NAL212_1380 hypothetical protein; hypothetical protein 3031199..3032506 Nitrosomonas sp. Is79A3 10934975 YP_004696021.1 CDS Nit79A3_2871 NC_015731.1 3032503 3033948 D KEGG: nit:NAL212_1381 undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; UDP-phosphate glucose phosphotransferase 3032503..3033948 Nitrosomonas sp. Is79A3 10934976 YP_004696022.1 CDS Nit79A3_2872 NC_015731.1 3033972 3034652 R PFAM: Phospholipase/carboxylesterase; KEGG: nit:NAL212_1574 carboxylesterase; phospholipase/Carboxylesterase complement(3033972..3034652) Nitrosomonas sp. Is79A3 10934977 YP_004696023.1 CDS Nit79A3_2873 NC_015731.1 3034737 3035855 D KEGG: nit:NAL212_1573 transglutaminase domain-containing protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like; transglutaminase domain-containing protein 3034737..3035855 Nitrosomonas sp. Is79A3 10934978 YP_004696024.1 CDS Nit79A3_2874 NC_015731.1 3036377 3038212 D KEGG: nit:NAL212_1569 TonB-dependent vitamin B12 receptor; TIGRFAM: TonB-dependent vitamin B12 receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; TonB-dependent vitamin B12 receptor 3036377..3038212 Nitrosomonas sp. Is79A3 10934979 YP_004696025.1 CDS Nit79A3_2875 NC_015731.1 3038226 3038810 D KEGG: nit:NAL212_1568 hypothetical protein; hypothetical protein 3038226..3038810 Nitrosomonas sp. Is79A3 10934980 YP_004696026.1 CDS Nit79A3_2876 NC_015731.1 3038815 3039420 D KEGG: nit:NAL212_1567 cob(I)alamin adenosyltransferase; TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; cob(I)alamin adenosyltransferase 3038815..3039420 Nitrosomonas sp. Is79A3 10934981 YP_004696027.1 CDS Nit79A3_2877 NC_015731.1 3039425 3040906 D TIGRFAM: Cobyric acid synthase CobQ; HAMAP: Cobyric acid synthase CobQ; KEGG: pst:PSPTO_1713 cobyric acid synthase; PFAM: CobB/CobQ-like glutamine amidotransferase; Cobyrinic acid a,c-diamide synthase; Cobyric acid synthase 3039425..3040906 Nitrosomonas sp. Is79A3 10934982 YP_004696028.1 CDS Nit79A3_2878 NC_015731.1 3040903 3041433 D PFAM: Cobinamide kinase/cobinamide phosphate guanyltransferase; KEGG: pae:PA1278 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; cobalbumin biosynthesis protein 3040903..3041433 Nitrosomonas sp. Is79A3 10934983 YP_004696029.1 CDS Nit79A3_2879 NC_015731.1 3041430 3042494 D TIGRFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, core, prokaryotic; HAMAP: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, core, prokaryotic; KEGG: tkm:TK90_1454 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like, core; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3041430..3042494 Nitrosomonas sp. Is79A3 10934984 YP_004696030.1 CDS Nit79A3_2880 NC_015731.1 3042508 3043104 D PFAM: Phosphoglycerate mutase; KEGG: psa:PST_1300 alpha-ribazole-5'-phosphate phosphatase; Phosphoglycerate mutase 3042508..3043104 Nitrosomonas sp. Is79A3 10934985 YP_004696031.1 CDS Nit79A3_2881 NC_015731.1 3043101 3043877 D TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; HAMAP: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; KEGG: acd:AOLE_10485 cobalamin 5'-phosphate synthase; PFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; Cobalamin synthase 3043101..3043877 Nitrosomonas sp. Is79A3 10934986 YP_004696032.1 CDS Nit79A3_2882 NC_015731.1 3044569 3045150 R KEGG: nit:NAL212_2602 hypothetical protein; hypothetical protein complement(3044569..3045150) Nitrosomonas sp. Is79A3 10934987 YP_004696033.1 CDS Nit79A3_2883 NC_015731.1 3045217 3045801 R KEGG: nit:NAL212_2603 hypothetical protein; hypothetical protein complement(3045217..3045801) Nitrosomonas sp. Is79A3 10934988 YP_004696034.1 CDS Nit79A3_2884 NC_015731.1 3045971 3047233 R KEGG: nit:NAL212_2604 methane monooxygenase/ammonia monooxygenase, subunit B; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; methane monooxygenase/ammonia monooxygenase subunit B complement(3045971..3047233) Nitrosomonas sp. Is79A3 10934989 YP_004696035.1 CDS Nit79A3_2885 NC_015731.1 3047233 3048057 R KEGG: nit:NAL212_2605 methane monooxygenase/ammonia monooxygenase, subunit A; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; methane monooxygenase/ammonia monooxygenase subunit A complement(3047233..3048057) Nitrosomonas sp. Is79A3 10934990 YP_004696036.1 CDS Nit79A3_2886 NC_015731.1 3048238 3049047 R KEGG: nit:NAL212_2606 methane monooxygenase/ammonia monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; methane monooxygenase/ammonia monooxygenase subunit C complement(3048238..3049047) Nitrosomonas sp. Is79A3 10934991 YP_004696037.1 CDS Nit79A3_2887 NC_015731.1 3049539 3050072 R hypothetical protein complement(3049539..3050072) Nitrosomonas sp. Is79A3 10934992 YP_004696038.1 CDS Nit79A3_2888 NC_015731.1 3050237 3051403 D PFAM: Transposase, IS4-like; KEGG: dar:Daro_2223 transposase IS4; transposase IS4 family protein 3050237..3051403 Nitrosomonas sp. Is79A3 10934993 YP_004696039.1 CDS Nit79A3_2889 NC_015731.1 3051396 3052118 R PFAM: Peptidase M10A/M12B, matrixin/adamalysin; peptidase M10A and M12B matrixin and adamalysin complement(3051396..3052118) Nitrosomonas sp. Is79A3 10934994 YP_004696040.1 CDS Nit79A3_2890 NC_015731.1 3052314 3053618 D PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 3052314..3053618 Nitrosomonas sp. Is79A3 10934995 YP_004696041.1 CDS Nit79A3_2891 NC_015731.1 3053785 3055029 R KEGG: nit:NAL212_2010 hypothetical protein; TIGRFAM: HI0933-like protein; PFAM: HI0933-like protein; hypothetical protein complement(3053785..3055029) Nitrosomonas sp. Is79A3 10934996 YP_004696042.1 CDS Nit79A3_2892 NC_015731.1 3055057 3055245 R manually curated; KEGG: nit:NAL212_2009 transmembrane protein; transmembrane protein complement(3055057..3055245) Nitrosomonas sp. Is79A3 10934997 YP_004696043.1 CDS Nit79A3_2893 NC_015731.1 3055404 3056366 D TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA dimethylallyltransferase; KEGG: nit:NAL212_2008 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA dimethylallyltransferase 3055404..3056366 Nitrosomonas sp. Is79A3 10934998 YP_004696044.1 CDS Nit79A3_2894 NC_015731.1 3056563 3056898 D PFAM: Transport-associated; KEGG: nit:NAL212_2007 transport-associated protein; transport-associated protein 3056563..3056898 Nitrosomonas sp. Is79A3 10934999 YP_004696045.1 CDS Nit79A3_2895 NC_015731.1 3056968 3057789 R KEGG: nit:NAL212_2006 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; HAMAP: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(3056968..3057789) Nitrosomonas sp. Is79A3 10935000 YP_004696046.1 CDS Nit79A3_2896 NC_015731.1 3057812 3059008 R KEGG: nit:NAL212_2005 succinyldiaminopimelate transaminase; TIGRFAM: Succinyldiaminopimelate transaminase, beta/gammaproteobacteria; PFAM: Aminotransferase, class I/II; succinyldiaminopimelate transaminase complement(3057812..3059008) Nitrosomonas sp. Is79A3 10935001 YP_004696047.1 CDS Nit79A3_2897 NC_015731.1 3059196 3061217 R PFAM: Copper resistance D; Cytochrome c, class I; KEGG: nit:NAL212_1916 copper resistance D domain-containing protein; copper resistance D domain-containing protein complement(3059196..3061217) Nitrosomonas sp. Is79A3 10935002 YP_004696048.1 CDS Nit79A3_2898 NC_015731.1 3061424 3062296 R PFAM: Protein of unknown function DUF519; KEGG: gca:Galf_1543 hypothetical protein; hypothetical protein complement(3061424..3062296) Nitrosomonas sp. Is79A3 10935003 YP_004696049.1 CDS Nit79A3_2899 NC_015731.1 3062507 3063205 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nit:NAL212_1708 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3062507..3063205 Nitrosomonas sp. Is79A3 10935004 YP_004696050.1 CDS Nit79A3_2900 NC_015731.1 3063314 3063757 D KEGG: vei:Veis_3132 hypothetical protein; hypothetical protein 3063314..3063757 Nitrosomonas sp. Is79A3 10935005 YP_004696051.1 CDS Nit79A3_2901 NC_015731.1 3063754 3064515 D PFAM: Domain of unknown function DUF1829; Domain of unknown function DUF1828; KEGG: vei:Veis_3133 Lj965 prophage protein; hypothetical protein 3063754..3064515 Nitrosomonas sp. Is79A3 10935006 YP_004696052.1 CDS Nit79A3_2902 NC_015731.1 3064664 3065113 R KEGG: nit:NAL212_1540 hypothetical protein; hypothetical protein complement(3064664..3065113) Nitrosomonas sp. Is79A3 10935007 YP_004696053.1 CDS Nit79A3_2903 NC_015731.1 3065235 3065735 R KEGG: nmu:Nmul_A0896 hypothetical protein; hypothetical protein complement(3065235..3065735) Nitrosomonas sp. Is79A3 10935008 YP_004696054.1 CDS Nit79A3_2904 NC_015731.1 3065781 3066425 R PFAM: Phosphoribosyltransferase; KEGG: nmu:Nmul_A0900 phosphoribosyltransferase; phosphoribosyltransferase complement(3065781..3066425) Nitrosomonas sp. Is79A3 10935009 YP_004696055.1 CDS Nit79A3_2905 NC_015731.1 3066444 3068177 R KEGG: nmu:Nmul_A0901 PHP-like; PFAM: PHP, C-terminal; SMART: DNA-directed DNA polymerase, family X; Helix-hairpin-helix DNA-binding motif, class 1; Polymerase/histidinol phosphatase, N-terminal; PHP domain-containing protein complement(3066444..3068177) Nitrosomonas sp. Is79A3 10935010 YP_004696056.1 CDS Nit79A3_2906 NC_015731.1 3068313 3068720 D PFAM: Archease, tRNA m5C methyltransferase chaperone; KEGG: nmu:Nmul_A0902 hypothetical protein; hypothetical protein 3068313..3068720 Nitrosomonas sp. Is79A3 10935011 YP_004696057.1 CDS Nit79A3_2907 NC_015731.1 3068717 3070144 D PFAM: Uncharacterised protein family UPF0027; KEGG: nmu:Nmul_A0903 hypothetical protein; hypothetical protein 3068717..3070144 Nitrosomonas sp. Is79A3 10935012 YP_004696058.1 CDS Nit79A3_2908 NC_015731.1 3070191 3070751 D KEGG: nmu:Nmul_A0905 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Cold-shock protein, DNA-binding; ribosomal subunit interface protein 3070191..3070751 Nitrosomonas sp. Is79A3 10935013 YP_004696059.1 CDS Nit79A3_2909 NC_015731.1 3070787 3071371 D KEGG: rfr:Rfer_0828 isochorismatase hydrolase; manually curated; PFAM: Isochorismatase-like; isochorismatase hydrolase 3070787..3071371 Nitrosomonas sp. Is79A3 10935014 YP_004696060.1 CDS Nit79A3_2910 NC_015731.1 3071368 3072726 D KEGG: nmu:Nmul_A0907 nicotinate phosphoribosyltransferase; TIGRFAM: Nicotinate phosphoribosyltransferase PFAM: Nicotinate phosphoribosyltransferase-like; nicotinate phosphoribosyltransferase 3071368..3072726 Nitrosomonas sp. Is79A3 10935015 YP_004696061.1 CDS Nit79A3_2911 NC_015731.1 3072831 3076091 R PFAM: Haemolysin-type calcium-binding region; KEGG: azl:AZL_a06050 rhizobiocin/RTX toxin and hemolysin-type calcium binding protein; Hemolysin-type calcium-binding protein complement(3072831..3076091) Nitrosomonas sp. Is79A3 10935016 YP_004696062.1 CDS Nit79A3_2912 NC_015731.1 3076571 3077074 D KEGG: nmu:Nmul_A1168 hypothetical protein; hypothetical protein 3076571..3077074 Nitrosomonas sp. Is79A3 10935017 YP_004696063.1 CDS Nit79A3_2913 NC_015731.1 3077240 3077689 D KEGG: nit:NAL212_1539 signal transduction protein with CBS domains; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; signal transduction protein with CBS domains 3077240..3077689 Nitrosomonas sp. Is79A3 10935018 YP_004696064.1 CDS Nit79A3_2914 NC_015731.1 3077842 3080217 D TIGRFAM: Peptidase S16, ATP-dependent protease La; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core; KEGG: neu:NE1278 ATP-dependent proteinase La 1 (lon) (class III heat-shock protein); SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; anti-sigma H sporulation factor, LonB 3077842..3080217 Nitrosomonas sp. Is79A3 10935019 YP_004696065.1 CDS Nit79A3_2915 NC_015731.1 3080607 3080951 D KEGG: nit:NAL212_1538 hypothetical protein; hypothetical protein 3080607..3080951 Nitrosomonas sp. Is79A3 10935020 YP_004696066.1 CDS Nit79A3_2916 NC_015731.1 3081051 3081524 D KEGG: nit:NAL212_2723 disulfide bond formation protein DsbB; HAMAP: Disulfide bond formation protein B; PFAM: Disulphide bond formation protein DsbB; Disulfide bond formation protein B 3081051..3081524 Nitrosomonas sp. Is79A3 10935021 YP_004696067.1 CDS Nit79A3_2917 NC_015731.1 3081535 3082446 R TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerD; KEGG: nit:NAL212_2724 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; Tyrosine recombinase xerD complement(3081535..3082446) Nitrosomonas sp. Is79A3 10935022 YP_004696068.1 CDS Nit79A3_2918 NC_015731.1 3082433 3082936 R KEGG: nit:NAL212_2725 methylated-DNA/protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; methylated-DNA/protein-cysteine methyltransferase complement(3082433..3082936) Nitrosomonas sp. Is79A3 10935023 YP_004696069.1 CDS Nit79A3_2919 NC_015731.1 3083096 3085006 R HAMAP: Chaperone protein htpG; PFAM: Heat shock protein Hsp90, C-terminal; ATP-binding region, ATPase-like; KEGG: nmu:Nmul_A1109 heat shock protein 90; SMART: ATP-binding region, ATPase-like; Chaperone protein htpG complement(3083096..3085006) Nitrosomonas sp. Is79A3 10935024 YP_004696070.1 CDS Nit79A3_2920 NC_015731.1 3085248 3086693 R TIGRFAM: NADH-quinone oxidoreductase, chain N; HAMAP: NAD(P)H-quinone oxidoreductase subunit 2; KEGG: nit:NAL212_2728 proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NAD(P)H-quinone oxidoreductase subunit 2 complement(3085248..3086693) Nitrosomonas sp. Is79A3 10935025 YP_004696071.1 CDS Nit79A3_2921 NC_015731.1 3086744 3088228 R KEGG: nit:NAL212_2729 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase, chain M complement(3086744..3088228) Nitrosomonas sp. Is79A3 10935026 YP_004696072.1 CDS Nit79A3_2922 NC_015731.1 3088321 3090261 R KEGG: nit:NAL212_2730 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; proton-translocating NADH-quinone oxidoreductase, chain L complement(3088321..3090261) Nitrosomonas sp. Is79A3 10935027 YP_004696073.1 CDS Nit79A3_2923 NC_015731.1 3090321 3090626 R KEGG: nit:NAL212_2731 NAD(P)H-quinone oxidoreductase subunit 4L; HAMAP: NAD(P)H-quinone oxidoreductase subunit 4L; PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; NAD(P)H-quinone oxidoreductase subunit 4L complement(3090321..3090626) Nitrosomonas sp. Is79A3 10935028 YP_004696074.1 CDS Nit79A3_2924 NC_015731.1 3090682 3091287 R PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: nit:NAL212_2732 NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 complement(3090682..3091287) Nitrosomonas sp. Is79A3 10935029 YP_004696075.1 CDS Nit79A3_2925 NC_015731.1 3091307 3091795 R TIGRFAM: NADH-quinone oxidoreductase, chain I; HAMAP: NADH-quinone oxidoreductase, chain I; KEGG: nit:NAL212_2733 NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; NAD(P)H-quinone oxidoreductase subunit I complement(3091307..3091795) Nitrosomonas sp. Is79A3 10935030 YP_004696076.1 CDS Nit79A3_2926 NC_015731.1 3091811 3092908 R KEGG: nit:NAL212_2734 NADH dehydrogenase (quinone); HAMAP: NAD(P)H-quinone oxidoreductase subunit 1; PFAM: NADH:ubiquinone oxidoreductase, subunit 1; NAD(P)H-quinone oxidoreductase subunit 1 complement(3091811..3092908) Nitrosomonas sp. Is79A3 10935031 YP_004696077.1 CDS Nit79A3_2927 NC_015731.1 3092931 3095342 R KEGG: nit:NAL212_2735 NADH-quinone oxidoreductase, chain G; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; Molybdopterin oxidoreductase; NADH-quinone oxidoreductase, chain G complement(3092931..3095342) Nitrosomonas sp. Is79A3 10935032 YP_004696078.1 CDS Nit79A3_2928 NC_015731.1 3095412 3096689 R KEGG: nit:NAL212_2736 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH ubiquinone oxidoreductase, F subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH-quinone oxidoreductase subunit F complement(3095412..3096689) Nitrosomonas sp. Is79A3 10935033 YP_004696079.1 CDS Nit79A3_2929 NC_015731.1 3096686 3097162 R KEGG: nit:NAL212_2737 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; NADH-quinone oxidoreductase subunit E complement(3096686..3097162) Nitrosomonas sp. Is79A3 10935034 YP_004696080.1 CDS Nit79A3_2930 NC_015731.1 3097169 3098422 R TIGRFAM: NADH dehydrogenase I, D subunit; HAMAP: NAD(P)H-quinone oxidoreductase subunit H; KEGG: nit:NAL212_2738 NADH dehydrogenase I, D subunit; PFAM: NADH-quinone oxidoreductase, subunit D; NAD(P)H-quinone oxidoreductase subunit H complement(3097169..3098422) Nitrosomonas sp. Is79A3 10935035 YP_004696081.1 CDS Nit79A3_2931 NC_015731.1 3098483 3099103 R TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; HAMAP: NAD(P)H-quinone oxidoreductase subunit J; KEGG: nit:NAL212_2739 NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit; NAD(P)H-quinone oxidoreductase subunit J complement(3098483..3099103) Nitrosomonas sp. Is79A3 10935036 YP_004696082.1 CDS Nit79A3_2932 NC_015731.1 3099109 3099585 R TIGRFAM: NADH:ubiquinone oxidoreductase, 20kDa subunit; HAMAP: NAD(P)H-quinone oxidoreductase subunit K; KEGG: nit:NAL212_2740 NADH-quinone oxidoreductase, B subunit; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; NAD(P)H-quinone oxidoreductase subunit K complement(3099109..3099585) Nitrosomonas sp. Is79A3 10935037 YP_004696083.1 CDS Nit79A3_2933 NC_015731.1 3099590 3099946 R KEGG: nit:NAL212_2741 NAD(P)H-quinone oxidoreductase subunit 3; HAMAP: NAD(P)H-quinone oxidoreductase subunit 3; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3; NAD(P)H-quinone oxidoreductase subunit 3 complement(3099590..3099946) Nitrosomonas sp. Is79A3 10935038 YP_004696084.1 CDS Nit79A3_2934 NC_015731.1 3100166 3100549 R KEGG: nmu:Nmul_A1090 preprotein translocase subunit SecG; TIGRFAM: Preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG complement(3100166..3100549) Nitrosomonas sp. Is79A3 10935040 YP_004696085.1 CDS Nit79A3_2935 NC_015731.1 3100568 3101323 R KEGG: nit:NAL212_2743 triosephosphate isomerase; TIGRFAM: Triosephosphate isomerase; PFAM: Triosephosphate isomerase; triosephosphate isomerase complement(3100568..3101323) Nitrosomonas sp. Is79A3 10935041 YP_004696086.1 CDS Nit79A3_2936 NC_015731.1 3101578 3102432 R TIGRFAM: Phosphate transport system permease 1; PFAM: ABC transporter-like; KEGG: nit:NAL212_2744 phosphate ABC transporter, ATPase subunit; SMART: ATPase, AAA+ type, core; phosphate ABC transporter ATPase complement(3101578..3102432) Nitrosomonas sp. Is79A3 10935042 YP_004696087.1 CDS Nit79A3_2937 NC_015731.1 3102380 3103306 R KEGG: nit:NAL212_2745 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease 2; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease complement(3102380..3103306) Nitrosomonas sp. Is79A3 10935043 YP_004696088.1 CDS Nit79A3_2938 NC_015731.1 3103399 3104331 R KEGG: nit:NAL212_2746 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: Phosphate ABC transporter, permease PstC; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease complement(3103399..3104331) Nitrosomonas sp. Is79A3 10935044 YP_004696089.1 CDS Nit79A3_2939 NC_015731.1 3104628 3105302 R PFAM: NapC/NirT cytochrome c, N-terminal; KEGG: nit:NAL212_2747 NapC/NirT cytochrome c domain-containing protein; NapC/NirT cytochrome c domain-containing protein complement(3104628..3105302) Nitrosomonas sp. Is79A3 10935045 YP_004696090.1 CDS Nit79A3_2940 NC_015731.1 3105302 3106021 R KEGG: nit:NAL212_2748 cytochrome c-554; cytochrome c-554 complement(3105302..3106021) Nitrosomonas sp. Is79A3 10935046 YP_004696091.1 CDS Nit79A3_2941 NC_015731.1 3106181 3107215 R KEGG: nit:NAL212_2749 hypothetical protein; hypothetical protein complement(3106181..3107215) Nitrosomonas sp. Is79A3 10935047 YP_004696092.1 CDS Nit79A3_2942 NC_015731.1 3107212 3108924 R KEGG: nit:NAL212_2750 hydroxylamine oxidase; hydroxylamine oxidase complement(3107212..3108924) Nitrosomonas sp. Is79A3 10935048 YP_004696093.1 CDS Nit79A3_2943 NC_015731.1 3109107 3109877 R KEGG: nit:NAL212_2751 hypothetical protein; hypothetical protein complement(3109107..3109877) Nitrosomonas sp. Is79A3 10935049 YP_004696094.1 CDS Nit79A3_2944 NC_015731.1 3110183 3111433 R PFAM: Cysteine-rich region, CCG; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: nit:NAL212_2158 hypothetical protein; hypothetical protein complement(3110183..3111433) Nitrosomonas sp. Is79A3 10935050 YP_004696095.1 CDS Nit79A3_2945 NC_015731.1 3111434 3112507 R PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; KEGG: nit:NAL212_2159 FAD linked oxidase domain-containing protein; FAD linked oxidase domain-containing protein complement(3111434..3112507) Nitrosomonas sp. Is79A3 10935051 YP_004696096.1 CDS Nit79A3_2946 NC_015731.1 3112513 3113967 R PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; KEGG: nit:NAL212_2160 D-lactate dehydrogenase (cytochrome); FAD linked oxidase domain-containing protein complement(3112513..3113967) Nitrosomonas sp. Is79A3 10935052 YP_004696097.1 CDS Nit79A3_2947 NC_015731.1 3113972 3114877 R KEGG: nit:NAL212_2161 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 2-hydroxy-3-oxopropionate reductase complement(3113972..3114877) Nitrosomonas sp. Is79A3 10935053 YP_004696098.1 CDS Nit79A3_2948 NC_015731.1 3114959 3115879 R PFAM: Bile acid:sodium symporter; KEGG: nit:NAL212_2211 bile acid:sodium symporter; Bile acid:sodium symporter complement(3114959..3115879) Nitrosomonas sp. Is79A3 10935054 YP_004696099.1 CDS Nit79A3_2949 NC_015731.1 3115905 3116618 R PFAM: Methyltransferase type 12; KEGG: nmu:Nmul_A1634 hypothetical protein; type 12 methyltransferase complement(3115905..3116618) Nitrosomonas sp. Is79A3 10935055 YP_004696100.1 CDS Nit79A3_2950 NC_015731.1 3116796 3117806 R KEGG: npu:Npun_DR029 lipoprotein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; SMP-30/Gluconolaconase/LRE-like region; PEP motif anchor domain-containing protein complement(3116796..3117806) Nitrosomonas sp. Is79A3 10935056 YP_004696101.1 CDS Nit79A3_2951 NC_015731.1 3117906 3118652 R KEGG: psl:Psta_3067 autotransporter-associated beta strand repeat-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(3117906..3118652) Nitrosomonas sp. Is79A3 10935057 YP_004696102.1 CDS Nit79A3_2952 NC_015731.1 3118731 3119255 R KEGG: nit:NAL212_0962 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; C-type lectin; PEP motif anchor domain-containing protein complement(3118731..3119255) Nitrosomonas sp. Is79A3 10935058 YP_004696103.1 CDS Nit79A3_2953 NC_015731.1 3119399 3120565 D PFAM: Transposase, IS4-like; KEGG: dar:Daro_2223 transposase IS4; transposase IS4 family protein 3119399..3120565 Nitrosomonas sp. Is79A3 10935059 YP_004696104.1 CDS Nit79A3_2954 NC_015731.1 3121124 3122311 D KEGG: nit:NAL212_2858 ErfK/YbiS/YcfS/YnhG family protein; PFAM: YkuD domain; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; ErfK/YbiS/YcfS/YnhG family protein 3121124..3122311 Nitrosomonas sp. Is79A3 10935060 YP_004696105.1 CDS Nit79A3_2955 NC_015731.1 3122358 3123281 R KEGG: gsu:GSU1898 hypothetical protein; hypothetical protein complement(3122358..3123281) Nitrosomonas sp. Is79A3 10935061 YP_004696106.1 CDS Nit79A3_2956 NC_015731.1 3123420 3124277 R KEGG: gur:Gura_1727 hypothetical protein; hypothetical protein complement(3123420..3124277) Nitrosomonas sp. Is79A3 10935062 YP_004696107.1 CDS Nit79A3_2957 NC_015731.1 3124541 3125035 D hypothetical protein 3124541..3125035 Nitrosomonas sp. Is79A3 10935063 YP_004696108.1 CDS Nit79A3_2958 NC_015731.1 3125115 3126089 D PFAM: Peptidase T2, asparaginase 2; KEGG: nit:NAL212_2859 beta-aspartyl-peptidase; peptidase T2 asparaginase 2 3125115..3126089 Nitrosomonas sp. Is79A3 10935064 YP_004696109.1 CDS Nit79A3_2959 NC_015731.1 3126114 3127955 R KEGG: rmr:Rmar_0342 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent complement(3126114..3127955) Nitrosomonas sp. Is79A3 10935065 YP_004696110.1 CDS Nit79A3_2960 NC_015731.1 3128093 3128332 D KEGG: rva:Rvan_1424 histone H1; histone H1 3128093..3128332 Nitrosomonas sp. Is79A3 10935066 YP_004696111.1 CDS Nit79A3_2961 NC_015731.1 3128315 3129316 R PFAM: Domain of unknown function P63C; KEGG: adn:Alide_4388 hypothetical protein; hypothetical protein complement(3128315..3129316) Nitrosomonas sp. Is79A3 10935067 YP_004696112.1 CDS Nit79A3_2963 NC_015731.1 3130363 3130701 R hypothetical protein complement(3130363..3130701) Nitrosomonas sp. Is79A3 10935069 YP_004696113.1 CDS Nit79A3_2964 NC_015731.1 3130698 3130964 R hypothetical protein complement(3130698..3130964) Nitrosomonas sp. Is79A3 10935070 YP_004696114.1 CDS Nit79A3_2965 NC_015731.1 3131248 3132066 D KEGG: aeh:Mlg_0098 PEP motif-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 3131248..3132066 Nitrosomonas sp. Is79A3 10935071 YP_004696115.1 CDS Nit79A3_2966 NC_015731.1 3132224 3133042 D KEGG: nit:NAL212_2860 polyphosphate:nucleotide phosphotransferase, PPK2 family; TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; PFAM: Polyphosphate kinase 2; polyphosphate:nucleotide phosphotransferase, PPK2 family 3132224..3133042 Nitrosomonas sp. Is79A3 10935072 YP_004696116.1 CDS Nit79A3_2967 NC_015731.1 3133095 3134585 D PFAM: CHAD; Adenylate cyclase; KEGG: nit:NAL212_2861 CHAD domain containing protein; CHAD domain containing protein 3133095..3134585 Nitrosomonas sp. Is79A3 10935073 YP_004696117.1 CDS Nit79A3_2970 NC_015731.1 3135674 3136603 R KEGG: nit:NAL212_2862 E3 ubiquitin ligase; E3 ubiquitin ligase complement(3135674..3136603) Nitrosomonas sp. Is79A3 10935075 YP_004696118.1 CDS Nit79A3_2971 NC_015731.1 3136618 3137190 R PFAM: LemA; KEGG: nit:NAL212_2863 LemA family protein; LemA family protein complement(3136618..3137190) Nitrosomonas sp. Is79A3 10935076 YP_004696119.1 CDS Nit79A3_2972 NC_015731.1 3137399 3137770 D KEGG: nit:NAL212_2864 hypothetical protein; hypothetical protein 3137399..3137770 Nitrosomonas sp. Is79A3 10935077 YP_004696120.1 CDS Nit79A3_2973 NC_015731.1 3137810 3138166 R KEGG: nit:NAL212_2866 hypothetical protein; hypothetical protein complement(3137810..3138166) Nitrosomonas sp. Is79A3 10935078 YP_004696121.1 CDS Nit79A3_2974 NC_015731.1 3138271 3138966 R KEGG: nit:NAL212_2867 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator complement(3138271..3138966) Nitrosomonas sp. Is79A3 10935079 YP_004696122.1 CDS Nit79A3_2975 NC_015731.1 3139217 3140143 D HAMAP: UPF0176 protein yceA; PFAM: Rhodanese-like; KEGG: slo:Shew_1781 hypothetical protein; SMART: Rhodanese-like; hypothetical protein 3139217..3140143 Nitrosomonas sp. Is79A3 10935080 YP_004696123.1 CDS Nit79A3_2976 NC_015731.1 3140197 3140712 R KEGG: nit:NAL212_0143 cytochrome c family protein; cytochrome c family protein complement(3140197..3140712) Nitrosomonas sp. Is79A3 10935081 YP_004696124.1 CDS Nit79A3_2977 NC_015731.1 3140789 3142288 R PFAM: Transglutaminase-like; KEGG: hypothetical protein; transglutaminase domain-containing protein complement(3140789..3142288) Nitrosomonas sp. Is79A3 10935082 YP_004696125.1 CDS Nit79A3_2978 NC_015731.1 3142683 3144110 R PFAM: Metal-dependent hydrolase HDOD; KEGG: bug:BC1001_1292 signal transduction protein; signal transduction protein complement(3142683..3144110) Nitrosomonas sp. Is79A3 10935083 YP_004696126.1 CDS Nit79A3_2979 NC_015731.1 3144107 3145747 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: nit:NAL212_1597 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; diguanylate cyclase/phosphodiesterase complement(3144107..3145747) Nitrosomonas sp. Is79A3 10935084 YP_004696127.1 CDS Nit79A3_2980 NC_015731.1 3146425 3147624 R TIGRFAM: Thiolase; KEGG: nit:NAL212_1990 acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase complement(3146425..3147624) Nitrosomonas sp. Is79A3 10935085 YP_004696128.1 CDS Nit79A3_2981 NC_015731.1 3147683 3150211 R PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG: nit:NAL212_1991 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; 3-hydroxyacyl-CoA dehydrogenase complement(3147683..3150211) Nitrosomonas sp. Is79A3 10935086 YP_004696129.1 CDS Nit79A3_2982 NC_015731.1 3150386 3150739 R KEGG: nit:NAL212_1992 ArsC family protein; TIGRFAM: Conserved hypothetical protein, ArsC related; PFAM: Arsenate reductase-like; ArsC family protein complement(3150386..3150739) Nitrosomonas sp. Is79A3 10935087 YP_004696130.1 CDS Nit79A3_2983 NC_015731.1 3150781 3151119 R PFAM: Cupin 2, conserved barrel; KEGG: nit:NAL212_1993 cupin 2 barrel domain-containing protein; cupin complement(3150781..3151119) Nitrosomonas sp. Is79A3 10935088 YP_004696131.1 CDS Nit79A3_2984 NC_015731.1 3151584 3151904 R hypothetical protein complement(3151584..3151904) Nitrosomonas sp. Is79A3 10935089 YP_004696132.1 CDS Nit79A3_2985 NC_015731.1 3151947 3152831 R KEGG: dba:Dbac_0811 hypothetical protein; hypothetical protein complement(3151947..3152831) Nitrosomonas sp. Is79A3 10935090 YP_004696133.1 CDS Nit79A3_2986 NC_015731.1 3153312 3154604 R PFAM: Protein of unknown function DUF1234; KEGG: nit:NAL212_1995 alpha/beta hydrolase, N-terminal protein; hypothetical protein complement(3153312..3154604) Nitrosomonas sp. Is79A3 10935091 YP_004696134.1 CDS Nit79A3_2987 NC_015731.1 3154782 3155129 R KEGG: dak:DaAHT2_0488 hypothetical protein; hypothetical protein complement(3154782..3155129) Nitrosomonas sp. Is79A3 10935092 YP_004696135.1 CDS Nit79A3_2988 NC_015731.1 3155110 3155406 R KEGG: tmz:Tmz1t_0495 hypothetical protein; hypothetical protein complement(3155110..3155406) Nitrosomonas sp. Is79A3 10935093 YP_004696136.1 CDS Nit79A3_2989 NC_015731.1 3155667 3155921 R PFAM: Phosphopantetheine-binding; KEGG: nit:NAL212_1588 phosphopantetheine-binding protein; phosphopantetheine-binding protein complement(3155667..3155921) Nitrosomonas sp. Is79A3 10935094 YP_004696137.1 CDS Nit79A3_2991 NC_015731.1 3157239 3158201 R PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein complement(3157239..3158201) Nitrosomonas sp. Is79A3 10935096 YP_004696138.1 CDS Nit79A3_2992 NC_015731.1 3158463 3159341 R KEGG: nit:NAL212_1491 hypothetical protein; hypothetical protein complement(3158463..3159341) Nitrosomonas sp. Is79A3 10935097 YP_004696139.1 CDS Nit79A3_2993 NC_015731.1 3159520 3160599 R KEGG: sus:Acid_6890 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(3159520..3160599) Nitrosomonas sp. Is79A3 10935098 YP_004696140.1 CDS Nit79A3_2994 NC_015731.1 3160742 3163000 D PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: nit:NAL212_1489 TonB-dependent receptor; TonB-dependent receptor 3160742..3163000 Nitrosomonas sp. Is79A3 10935099 YP_004696141.1 CDS Nit79A3_2995 NC_015731.1 3163077 3164201 D KEGG: nit:NAL212_1485 glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase 3163077..3164201 Nitrosomonas sp. Is79A3 10935100 YP_004696142.1 CDS Nit79A3_2996 NC_015731.1 3164486 3166561 D TIGRFAM: polyphosphate kinase 1; HAMAP: Polyphosphate kinase; KEGG: nit:NAL212_1484 polyphosphate kinase; PFAM: Polyphosphate kinase; polyphosphate kinase 3164486..3166561 Nitrosomonas sp. Is79A3 10935101 YP_004696143.1 CDS Nit79A3_2997 NC_015731.1 3166558 3168042 R KEGG: nit:NAL212_1483 Ppx/GppA phosphatase; TIGRFAM: exopolyphosphatase; PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase complement(3166558..3168042) Nitrosomonas sp. Is79A3 10935102 YP_004696144.1 CDS Nit79A3_2998 NC_015731.1 3168101 3168625 D KEGG: nit:NAL212_1482 phosphohistidine phosphatase, SixA; TIGRFAM: Phosphohistidine phosphatase SixA, subgroup; PFAM: Phosphoglycerate mutase; phosphohistidine phosphatase, SixA 3168101..3168625 Nitrosomonas sp. Is79A3 10935103 YP_004696145.1 CDS Nit79A3_2999 NC_015731.1 3168671 3169132 R KEGG: nit:NAL212_1481 hypothetical protein; hypothetical protein complement(3168671..3169132) Nitrosomonas sp. Is79A3 10935104 YP_004696146.1 CDS Nit79A3_3000 NC_015731.1 3169323 3169682 R KEGG: nit:NAL212_1480 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease complement(3169323..3169682) Nitrosomonas sp. Is79A3 10935105 YP_004696147.1 CDS Nit79A3_3001 NC_015731.1 3169851 3171680 R PFAM: AMP-dependent synthetase/ligase; KEGG: nit:NAL212_1478 long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase/ligase complement(3169851..3171680) Nitrosomonas sp. Is79A3 10935106 YP_004696148.1 CDS Nit79A3_3002 NC_015731.1 3171750 3174221 R PFAM: Protein of unknown function DUF1974; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: nit:NAL212_1477 hypothetical protein; hypothetical protein complement(3171750..3174221) Nitrosomonas sp. Is79A3 10935107 YP_004696149.1 CDS Nit79A3_3003 NC_015731.1 3174463 3175665 D TIGRFAM: Succinyl-diaminopimelate desuccinylase, proteobacteria; HAMAP: Succinyl-diaminopimelate desuccinylase, proteobacteria; KEGG: nit:NAL212_2292 succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation; Succinyl-diaminopimelate desuccinylase 3174463..3175665 Nitrosomonas sp. Is79A3 10935108 YP_004696150.1 CDS Nit79A3_3004 NC_015731.1 3175737 3176546 R hypothetical protein complement(3175737..3176546) Nitrosomonas sp. Is79A3 10935109 YP_004696151.1 CDS Nit79A3_3005 NC_015731.1 3176650 3177291 R manually curated; KEGG: nit:NAL212_1049 hypothetical protein; hypothetical protein complement(3176650..3177291) Nitrosomonas sp. Is79A3 10935110 YP_004696152.1 CDS Nit79A3_3006 NC_015731.1 3177458 3178393 D KEGG: nit:NAL212_2003 lipoprotein; lipoprotein 3177458..3178393 Nitrosomonas sp. Is79A3 10935111 YP_004696153.1 CDS Nit79A3_3007 NC_015731.1 3178840 3179175 R KEGG: dps:DP2299 hypothetical protein; hypothetical protein complement(3178840..3179175) Nitrosomonas sp. Is79A3 10935112 YP_004696154.1 CDS Nit79A3_3008 NC_015731.1 3179196 3179567 R KEGG: xac:XACa0008 hypothetical protein; hypothetical protein complement(3179196..3179567) Nitrosomonas sp. Is79A3 10935113 YP_004696155.1 CDS Nit79A3_3010 NC_015731.1 3180194 3181156 D PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 3180194..3181156 Nitrosomonas sp. Is79A3 10935115 YP_004696156.1 CDS Nit79A3_3011 NC_015731.1 3181255 3181539 R PFAM: Conserved hypothetical protein CHP02241, phage tail region protein; KEGG: ppd:Ppro_0372 phage tail protein; hypothetical protein complement(3181255..3181539) Nitrosomonas sp. Is79A3 10935116 YP_004696157.1 CDS Nit79A3_3012 NC_015731.1 3181601 3183121 R PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, KEGG: nit:NAL212_1342 hypothetical protein; hypothetical protein complement(3181601..3183121) Nitrosomonas sp. Is79A3 10935117 YP_004696158.1 CDS Nit79A3_3013 NC_015731.1 3183324 3184328 D KEGG: nit:NAL212_1341 glucokinase; TIGRFAM: Glucokinase; PFAM: Glucokinase; glucokinase 3183324..3184328 Nitrosomonas sp. Is79A3 10935118 YP_004696159.1 CDS Nit79A3_3014 NC_015731.1 3184420 3186972 D KEGG: nit:NAL212_1340 alpha-glucan phosphorylase; TIGRFAM: Alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; alpha-glucan phosphorylase 3184420..3186972 Nitrosomonas sp. Is79A3 10935119 YP_004696160.1 CDS Nit79A3_3015 NC_015731.1 3187058 3187411 D PFAM: Transposase IS3/IS911; KEGG: gca:Galf_0832 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 3187058..3187411 Nitrosomonas sp. Is79A3 10935120 YP_004696161.1 CDS Nit79A3_3017 NC_015731.1 3188502 3191804 R KEGG: sli:Slin_5300 hypothetical protein; hypothetical protein complement(3188502..3191804) Nitrosomonas sp. Is79A3 10935122 YP_004696162.1 CDS Nit79A3_3019 NC_015731.1 3192232 3192348 R hypothetical protein complement(3192232..3192348) Nitrosomonas sp. Is79A3 10935124 YP_004696163.1 CDS Nit79A3_3020 NC_015731.1 3192502 3193083 R hypothetical protein complement(3192502..3193083) Nitrosomonas sp. Is79A3 10935125 YP_004696164.1 CDS Nit79A3_3021 NC_015731.1 3193080 3194273 R TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; KEGG: meh:M301_0202 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthase complement(3193080..3194273) Nitrosomonas sp. Is79A3 10935126 YP_004696165.1 CDS Nit79A3_3023 NC_015731.1 3199129 3200022 D KEGG: rpe:RPE_4585 hypothetical protein; hypothetical protein 3199129..3200022 Nitrosomonas sp. Is79A3 10935128 YP_004696166.1 CDS Nit79A3_3024 NC_015731.1 3200591 3201679 D KEGG: sus:Acid_4088 OmpA/MotB domain-containing protein; hypothetical protein 3200591..3201679 Nitrosomonas sp. Is79A3 10935129 YP_004696167.1 CDS Nit79A3_3025 NC_015731.1 3201837 3202769 R KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit complement(3201837..3202769) Nitrosomonas sp. Is79A3 10935130 YP_004696168.1 CDS Nit79A3_3028 NC_015731.1 3204383 3206581 R hypothetical protein complement(3204383..3206581) Nitrosomonas sp. Is79A3 10935133 YP_004696169.1 CDS Nit79A3_3029 NC_015731.1 3206649 3208667 R KEGG: sus:Acid_7631 hypothetical protein; hypothetical protein complement(3206649..3208667) Nitrosomonas sp. Is79A3 10935134 YP_004696170.1 CDS Nit79A3_3030 NC_015731.1 3208744 3209688 R KEGG: nmu:Nmul_A2047 hypothetical protein; hypothetical protein complement(3208744..3209688) Nitrosomonas sp. Is79A3 10935135 YP_004696171.1 CDS Nit79A3_3031 NC_015731.1 3209906 3210325 R KEGG: ana:alr2947 hypothetical protein; hypothetical protein complement(3209906..3210325) Nitrosomonas sp. Is79A3 10935136 YP_004696172.1 CDS Nit79A3_3032 NC_015731.1 3210363 3210869 R TIGRFAM: Conserved hypothetical protein CHP02594; KEGG: mdi:METDI4352 hypothetical protein; hypothetical protein complement(3210363..3210869) Nitrosomonas sp. Is79A3 10935137 YP_004696173.1 CDS Nit79A3_3033 NC_015731.1 3210990 3211508 R hypothetical protein complement(3210990..3211508) Nitrosomonas sp. Is79A3 10935138 YP_004696174.1 CDS Nit79A3_3034 NC_015731.1 3211736 3213742 D KEGG: bpy:Bphyt_2129 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; integral membrane sensor hybrid histidine kinase 3211736..3213742 Nitrosomonas sp. Is79A3 10935139 YP_004696175.1 CDS Nit79A3_3035 NC_015731.1 3213670 3214416 R KEGG: bja:blr7015 two-component response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(3213670..3214416) Nitrosomonas sp. Is79A3 10935140 YP_004696176.1 CDS Nit79A3_3036 NC_015731.1 3214588 3215994 D KEGG: nit:NAL212_2397 membrane protein involved in aromatic hydrocarbon degradation; manually curated; PFAM: Membrane protein, aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 3214588..3215994 Nitrosomonas sp. Is79A3 10935141 YP_004696177.1 CDS Nit79A3_3038 NC_015731.1 3216884 3218689 D KEGG: bge:BC1002_7116 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; integral membrane sensor hybrid histidine kinase 3216884..3218689 Nitrosomonas sp. Is79A3 10935143 YP_004696178.1 CDS Nit79A3_3039 NC_015731.1 3218679 3219332 R KEGG: slt:Slit_2581 LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator complement(3218679..3219332) Nitrosomonas sp. Is79A3 10935144 YP_004696179.1 CDS Nit79A3_3040 NC_015731.1 3219657 3221864 R SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: 1,4-alpha-glucan branching enzyme, core region; KEGG: nit:NAL212_2770 1,4-alpha-glucan branching enzyme; HAMAP: 1,4-alpha-glucan branching enzyme, core region; PFAM: Alpha-amylase, C-terminal all beta; Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region; 1,4-alpha-glucan branching enzyme complement(3219657..3221864) Nitrosomonas sp. Is79A3 10935145 YP_004696180.1 CDS Nit79A3_3041 NC_015731.1 3222022 3223341 D TIGRFAM: Glucose-1-phosphate adenylyltransferase; HAMAP: Glucose-1-phosphate adenylyltransferase; KEGG: nit:NAL212_2769 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; Glucose-1-phosphate adenylyltransferase 3222022..3223341 Nitrosomonas sp. Is79A3 10935146 YP_004696181.1 CDS Nit79A3_3042 NC_015731.1 3223369 3225072 D PFAM: Glycoside hydrolase, family 57, core; KEGG: nit:NAL212_2768 glycoside hydrolase 57; glycoside hydrolase 57 3223369..3225072 Nitrosomonas sp. Is79A3 10935147 YP_004696182.1 CDS Nit79A3_3043 NC_015731.1 3225162 3227174 D PFAM: Alpha-amylase/4-alpha-glucanotransferase, prokaryotic; Domain of unknown function DUF1925; Glycoside hydrolase, family 57, core; KEGG: nit:NAL212_2767 4-alpha-glucanotransferase; hypothetical protein 3225162..3227174 Nitrosomonas sp. Is79A3 10935148 YP_004696183.1 CDS Nit79A3_3044 NC_015731.1 3227278 3228912 D KEGG: nit:NAL212_2766 glucose-6-phosphate isomerase; HAMAP: Phosphoglucose isomerase (PGI); PFAM: Phosphoglucose isomerase (PGI); Glucose-6-phosphate isomerase 3227278..3228912 Nitrosomonas sp. Is79A3 10935149 YP_004696184.1 CDS Nit79A3_3045 NC_015731.1 3228923 3230398 D TIGRFAM: Glycogen/starch synthases, ADP-glucose type; HAMAP: Glycogen/starch synthases, ADP-glucose type; KEGG: nit:NAL212_2765 glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic region; Glycosyl transferase, group 1; Glycogen synthase 3228923..3230398 Nitrosomonas sp. Is79A3 10935150 YP_004696185.1 CDS Nit79A3_3046 NC_015731.1 3230448 3231863 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; KEGG: nit:NAL212_1391 dihydrolipoyl dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3230448..3231863) Nitrosomonas sp. Is79A3 10935151 YP_004696186.1 CDS Nit79A3_3047 NC_015731.1 3231915 3232325 R KEGG: pol:Bpro_2306 hypothetical protein; hypothetical protein complement(3231915..3232325) Nitrosomonas sp. Is79A3 10935152 YP_004696187.1 CDS Nit79A3_3048 NC_015731.1 3232388 3232642 R KEGG: nit:NAL212_2550 nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC complement(3232388..3232642) Nitrosomonas sp. Is79A3 10935153 YP_004696188.1 CDS Nit79A3_3049 NC_015731.1 3232706 3233044 R PFAM: Protein of unknown function DUF326; KEGG: nmu:Nmul_A1745 hypothetical protein; hypothetical protein complement(3232706..3233044) Nitrosomonas sp. Is79A3 10935154 YP_004696189.1 CDS Nit79A3_3050 NC_015731.1 3233267 3234040 D KEGG: nit:NAL212_2399 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; SMART: HTH transcriptional regulator, Crp; Crp/Fnr family transcriptional regulator 3233267..3234040 Nitrosomonas sp. Is79A3 10935155 YP_004696190.1 CDS Nit79A3_3051 NC_015731.1 3234061 3234591 R PFAM: Redoxin; KEGG: hoh:Hoch_6651 redoxin; Redoxin domain-containing protein complement(3234061..3234591) Nitrosomonas sp. Is79A3 10935156 YP_004696191.1 CDS Nit79A3_3052 NC_015731.1 3234727 3235197 R PFAM: Ferritin/Dps protein; KEGG: nhl:Nhal_1435 ferritin Dps family protein; ferritin complement(3234727..3235197) Nitrosomonas sp. Is79A3 10935157 YP_004696192.1 CDS Nit79A3_3053 NC_015731.1 3235301 3235615 R PFAM: BolA-like protein; KEGG: nit:NAL212_1373 BolA family protein; BolA family protein complement(3235301..3235615) Nitrosomonas sp. Is79A3 10935158 YP_004696193.1 CDS Nit79A3_3054 NC_015731.1 3235710 3235988 R PFAM: CsbD-like; KEGG: mms:mma_1042 hypothetical protein; CsbD family protein complement(3235710..3235988) Nitrosomonas sp. Is79A3 10935159 YP_004696194.1 CDS Nit79A3_3055 NC_015731.1 3236193 3237308 R PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein complement(3236193..3237308) Nitrosomonas sp. Is79A3 10935160 YP_004696195.1 CDS Nit79A3_3056 NC_015731.1 3237499 3239298 D KEGG: nit:NAL212_2764 hypothetical protein; hypothetical protein 3237499..3239298 Nitrosomonas sp. Is79A3 10935161 YP_004696196.1 CDS Nit79A3_3057 NC_015731.1 3239437 3240342 R KEGG: sma:SAV_4164 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(3239437..3240342) Nitrosomonas sp. Is79A3 10935162 YP_004696197.1 CDS Nit79A3_3059 NC_015731.1 3241171 3241605 D PFAM: 3-demethylubiquinone-9 3-O-methyltransferase; KEGG: nit:NAL212_2762 hypothetical protein; 3-demethylubiquinone-9 3-methyltransferase 3241171..3241605 Nitrosomonas sp. Is79A3 10935164 YP_004696198.1 CDS Nit79A3_3060 NC_015731.1 3241602 3241826 D KEGG: nit:NAL212_2761 hypothetical protein; hypothetical protein 3241602..3241826 Nitrosomonas sp. Is79A3 10935165 YP_004696199.1 CDS Nit79A3_3061 NC_015731.1 3241823 3242185 D KEGG: nit:NAL212_2760 hypothetical protein; hypothetical protein 3241823..3242185 Nitrosomonas sp. Is79A3 10935166 YP_004696200.1 CDS Nit79A3_3062 NC_015731.1 3242362 3243057 D KEGG: gme:Gmet_1207 hypothetical protein; hypothetical protein 3242362..3243057 Nitrosomonas sp. Is79A3 10935167 YP_004696201.1 CDS Nit79A3_3063 NC_015731.1 3243347 3244564 D PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; KEGG: nhl:Nhal_1988 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 3243347..3244564 Nitrosomonas sp. Is79A3 10935168 YP_004696202.1 CDS Nit79A3_3064 NC_015731.1 3244802 3245125 D KEGG: nit:NAL212_0856 hypothetical protein; hypothetical protein 3244802..3245125 Nitrosomonas sp. Is79A3 10935169 YP_004696203.1 CDS Nit79A3_3065 NC_015731.1 3245139 3245288 D hypothetical protein 3245139..3245288 Nitrosomonas sp. Is79A3 10935170 YP_004696204.1 CDS Nit79A3_3066 NC_015731.1 3245378 3246232 R KEGG: nit:NAL212_2757 hypothetical protein; hypothetical protein complement(3245378..3246232) Nitrosomonas sp. Is79A3 10935171 YP_004696205.1 CDS Nit79A3_3067 NC_015731.1 3246682 3247326 D hypothetical protein 3246682..3247326 Nitrosomonas sp. Is79A3 10935172 YP_004696206.1 CDS Nit79A3_3068 NC_015731.1 3247875 3249437 D KEGG: hoh:Hoch_6445 thiol oxidoreductase-like protein; thiol oxidoreductase 3247875..3249437 Nitrosomonas sp. Is79A3 10935173 YP_004696207.1 CDS Nit79A3_3069 NC_015731.1 3249713 3250840 D PFAM: NADPH-dependent FMN reductase; KEGG: pna:Pnap_0016 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 3249713..3250840 Nitrosomonas sp. Is79A3 10935174 YP_004696208.1 CDS Nit79A3_3070 NC_015731.1 3251099 3252364 D TIGRFAM: Gamma-glutamyl phosphate reductase GPR; HAMAP: Glutamate-5-semialdehyde dehydrogenase; KEGG: nit:NAL212_1336 gamma-glutamyl phosphate reductase; PFAM: Aldehyde dehydrogenase; Gamma-glutamyl phosphate reductase 3251099..3252364 Nitrosomonas sp. Is79A3 10935175 YP_004696209.1 CDS Nit79A3_3071 NC_015731.1 3252419 3254185 D KEGG: nit:NAL212_1335 dihydrolipoamide dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Biotin/lipoyl attachment; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoamide dehydrogenase 3252419..3254185 Nitrosomonas sp. Is79A3 10935176 YP_004696210.1 CDS Nit79A3_3072 NC_015731.1 3254275 3254676 D KEGG: nit:NAL212_1334 hypothetical protein; hypothetical protein 3254275..3254676 Nitrosomonas sp. Is79A3 10935177 YP_004696211.1 CDS Nit79A3_3073 NC_015731.1 3254771 3255574 D PFAM: Protein of unknown function DUF785; KEGG: nit:NAL212_1333 hypothetical protein; hypothetical protein 3254771..3255574 Nitrosomonas sp. Is79A3 10935178 YP_004696212.1 CDS Nit79A3_3074 NC_015731.1 3255574 3257127 D KEGG: nit:NAL212_1332 hypothetical protein; hypothetical protein 3255574..3257127 Nitrosomonas sp. Is79A3 10935179 YP_004696213.1 CDS Nit79A3_3075 NC_015731.1 3257108 3258109 D TIGRFAM: Alpha-L-glutamate ligase-related protein; KEGG: nit:NAL212_1331 alpha-L-glutamate ligase-like protein; alpha-L-glutamate ligase 3257108..3258109 Nitrosomonas sp. Is79A3 10935180 YP_004696214.1 CDS Nit79A3_3076 NC_015731.1 3258148 3259812 R TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction histidine kinase, phosphotransfer (Hpt) region; Signal transduction response regulator, receiver region; KEGG: nit:NAL212_1330 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase complement(3258148..3259812) Nitrosomonas sp. Is79A3 10935181 YP_004696215.1 CDS Nit79A3_3078 NC_015731.1 3260239 3261108 D KEGG: nit:NAL212_1116 esterase/lipase/thioesterase; esterase 3260239..3261108 Nitrosomonas sp. Is79A3 10935183 YP_004696216.1 CDS Nit79A3_3079 NC_015731.1 3261230 3261679 D PFAM: UspA; KEGG: nit:NAL212_1115 UspA domain-containing protein; UspA domain-containing protein 3261230..3261679 Nitrosomonas sp. Is79A3 10935184 YP_004696217.1 CDS Nit79A3_3080 NC_015731.1 3261706 3262482 R TIGRFAM: Outer membrane assembly lipoprotein YfiO; KEGG: nit:NAL212_1114 outer membrane assembly lipoprotein YfiO; outer membrane assembly lipoprotein YfiO complement(3261706..3262482) Nitrosomonas sp. Is79A3 10935185 YP_004696218.1 CDS Nit79A3_3081 NC_015731.1 3262508 3263539 D KEGG: nit:NAL212_1113 pseudouridine synthase, RluA family; TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; pseudouridine synthase 3262508..3263539 Nitrosomonas sp. Is79A3 10935186 YP_004696219.1 CDS Nit79A3_3082 NC_015731.1 3263606 3264979 R PFAM: Protein of unknown function DUF1597; KEGG: nit:NAL212_1112 hypothetical protein; hypothetical protein complement(3263606..3264979) Nitrosomonas sp. Is79A3 10935187 YP_004696220.1 CDS Nit79A3_3083 NC_015731.1 3265621 3266496 D PFAM: Type IV pilus assembly PilZ; KEGG: nit:NAL212_1111 type IV pilus assembly PilZ; type IV pilus assembly PilZ 3265621..3266496 Nitrosomonas sp. Is79A3 10935188 YP_004696221.1 CDS Nit79A3_3084 NC_015731.1 3266526 3267191 R KEGG: nit:NAL212_1110 CAAX prenyl protease-like protein; TIGRFAM: Prenyl protease-related; PFAM: Abortive infection protein; CAAX prenyl protease-like protein complement(3266526..3267191) Nitrosomonas sp. Is79A3 10935189 YP_004696222.1 CDS Nit79A3_3085 NC_015731.1 3267363 3268544 R KEGG: nit:NAL212_1109 DNA-directed DNA polymerase; HAMAP: DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like; DNA polymerase IV complement(3267363..3268544) Nitrosomonas sp. Is79A3 10935190 YP_004696223.1 CDS Nit79A3_3086 NC_015731.1 3268588 3268998 D HAMAP: UPF0225 protein ychJ; KEGG: nmu:Nmul_A1106 hypothetical protein; hypothetical protein 3268588..3268998 Nitrosomonas sp. Is79A3 10935191 YP_004696224.1 CDS Nit79A3_3087 NC_015731.1 3269055 3270317 R PFAM: Protein of unknown function DUF2279, periplasmic lipoprotein; KEGG: nmu:Nmul_A2261 hypothetical protein; hypothetical protein complement(3269055..3270317) Nitrosomonas sp. Is79A3 10935192 YP_004696225.1 CDS Nit79A3_3088 NC_015731.1 3270399 3270947 R TIGRFAM: Transcription elongation factor GreB, prokaryotic; HAMAP: Transcription elongation factor greA; KEGG: nit:NAL212_2202 transcription elongation factor GreB; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; transcription elongation factor GreB complement(3270399..3270947) Nitrosomonas sp. Is79A3 10935193 YP_004696226.1 CDS Nit79A3_3089 NC_015731.1 3271110 3272426 D KEGG: amr:AM1_6060 histidine decarboxylase; histidine decarboxylase 3271110..3272426 Nitrosomonas sp. Is79A3 10935194 YP_004696227.1 CDS Nit79A3_3090 NC_015731.1 3272433 3272765 R PFAM: Small multidrug resistance protein; KEGG: nit:NAL212_2771 small multidrug resistance protein; small multidrug resistance protein complement(3272433..3272765) Nitrosomonas sp. Is79A3 10935195 YP_004696228.1 CDS Nit79A3_3091 NC_015731.1 3272796 3273764 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; KEGG: nit:NAL212_0587 phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(3272796..3273764) Nitrosomonas sp. Is79A3 10935196 YP_004696229.1 CDS Nit79A3_3092 NC_015731.1 3273976 3274449 R KEGG: sde:Sde_2290 hypothetical protein; hypothetical protein complement(3273976..3274449) Nitrosomonas sp. Is79A3 10935197 YP_004696230.1 CDS Nit79A3_3093 NC_015731.1 3274739 3275956 R KEGG: nit:NAL212_0581 hypothetical protein; hypothetical protein complement(3274739..3275956) Nitrosomonas sp. Is79A3 10935198 YP_004696231.1 CDS Nit79A3_3094 NC_015731.1 3275946 3276782 R PFAM: Abortive infection protein; KEGG: cvi:CV_3749 hypothetical protein; Abortive infection protein complement(3275946..3276782) Nitrosomonas sp. Is79A3 10935199 YP_004696232.1 CDS Nit79A3_3095 NC_015731.1 3276977 3278362 R TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: nit:NAL212_0580 replicative DNA helicase; SMART: ATPase, AAA+ type, core; replicative DNA helicase complement(3276977..3278362) Nitrosomonas sp. Is79A3 10935200 YP_004696233.1 CDS Nit79A3_3096 NC_015731.1 3278480 3278935 R TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; HAMAP: Ribosomal protein L9, bacteria/chloroplast; KEGG: nit:NAL212_0579 50S ribosomal protein L9; PFAM: Ribosomal protein L9, N-terminal; Ribosomal protein L9, C-terminal; 50S ribosomal protein L9 complement(3278480..3278935) Nitrosomonas sp. Is79A3 10935201 YP_004696234.1 CDS Nit79A3_3097 NC_015731.1 3278947 3279228 R TIGRFAM: Ribosomal protein S18; HAMAP: 30S ribosomal protein S18; KEGG: nit:NAL212_0578 30S ribosomal protein S18; PFAM: Ribosomal protein S18; 30S ribosomal protein S18 complement(3278947..3279228) Nitrosomonas sp. Is79A3 10935202 YP_004696235.1 CDS Nit79A3_3098 NC_015731.1 3279248 3279544 R KEGG: nit:NAL212_0577 single-strand binding protein/primosomal replication protein N; manually curated; PFAM: Primosome PriB/single-strand DNA-binding; single-strand binding protein/Primosomal replication protein n complement(3279248..3279544) Nitrosomonas sp. Is79A3 10935203 YP_004696236.1 CDS Nit79A3_3099 NC_015731.1 3279557 3279997 R TIGRFAM: Ribosomal protein S6; HAMAP: Ribosomal protein S6, bacterial-like; KEGG: nit:NAL212_0576 30S ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; 30S ribosomal protein S6 complement(3279557..3279997) Nitrosomonas sp. Is79A3 10935204 YP_004696237.1 CDS Nit79A3_3100 NC_015731.1 3280291 3280854 D KEGG: nit:NAL212_0575 glutamine amidotransferase of anthranilate synthase; TIGRFAM: Glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I, C-terminal; glutamine amidotransferase of anthranilate synthase 3280291..3280854 Nitrosomonas sp. Is79A3 10935205 YP_004696238.1 CDS Nit79A3_3101 NC_015731.1 3280882 3281907 D TIGRFAM: Anthranilate phosphoribosyl transferase; HAMAP: Anthranilate phosphoribosyl transferase; KEGG: nit:NAL212_0574 anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; Anthranilate phosphoribosyltransferase 3280882..3281907 Nitrosomonas sp. Is79A3 10935206 YP_004696239.1 CDS Nit79A3_3102 NC_015731.1 3281915 3282751 D PFAM: Indole-3-glycerol phosphate synthase; KEGG: nit:NAL212_0573 indole-3-glycerol-phosphate synthase; indole-3-glycerol phosphate synthase 3281915..3282751 Nitrosomonas sp. Is79A3 10935207 YP_004696240.1 CDS Nit79A3_3103 NC_015731.1 3282900 3283748 D PFAM: Metal-dependent hydrolase HDOD; KEGG: nit:NAL212_0572 metal-dependent hydrolase HDOD; Metal-dependent hydrolase HDOD 3282900..3283748 Nitrosomonas sp. Is79A3 10935208 YP_004696241.1 CDS Nit79A3_3104 NC_015731.1 3283989 3285788 R KEGG: sea:SeAg_B2870 hypothetical protein; hypothetical protein complement(3283989..3285788) Nitrosomonas sp. Is79A3 10935209 YP_004696242.1 CDS Nit79A3_3105 NC_015731.1 3286595 3287050 D hypothetical protein 3286595..3287050 Nitrosomonas sp. Is79A3 10935210 YP_004696243.1 CDS Nit79A3_3106 NC_015731.1 3287512 3288396 D KEGG: sbm:Shew185_4132 hypothetical protein; hypothetical protein 3287512..3288396 Nitrosomonas sp. Is79A3 10935211 YP_004696244.1 CDS Nit79A3_3107 NC_015731.1 3289143 3290153 D hypothetical protein 3289143..3290153 Nitrosomonas sp. Is79A3 10935212 YP_004696245.1 CDS Nit79A3_3108 NC_015731.1 3290298 3290639 D hypothetical protein 3290298..3290639 Nitrosomonas sp. Is79A3 10935213 YP_004696246.1 CDS Nit79A3_3109 NC_015731.1 3291134 3291970 D KEGG: dar:Daro_1040 hypothetical protein; hypothetical protein 3291134..3291970 Nitrosomonas sp. Is79A3 10935214 YP_004696247.1 CDS Nit79A3_3110 NC_015731.1 3292076 3293458 D KEGG: nit:NAL212_0325 replication initiation factor; replication initiation factor 3292076..3293458 Nitrosomonas sp. Is79A3 10935215 YP_004696248.1 CDS Nit79A3_3111 NC_015731.1 3293455 3293784 D KEGG: nit:NAL212_2472 DNA binding protein, excisionase; DNA binding protein, excisionase 3293455..3293784 Nitrosomonas sp. Is79A3 10935216 YP_004696249.1 CDS Nit79A3_3112 NC_015731.1 3293661 3294698 D KEGG: nit:NAL212_0327 integrase; manually curated; PFAM: Integrase, catalytic core, phage; integrase 3293661..3294698 Nitrosomonas sp. Is79A3 10935217 YP_004696250.1 CDS Nit79A3_3113 NC_015731.1 3294819 3295247 R PFAM: Stringent starvation protein B; KEGG: nit:NAL212_2477 stringent starvation protein B; Stringent starvation protein B complement(3294819..3295247) Nitrosomonas sp. Is79A3 10935219 YP_004696251.1 CDS Nit79A3_3114 NC_015731.1 3295244 3295843 R PFAM: Glutathione S-transferase, N-terminal; KEGG: nit:NAL212_2478 glutathione S-transferase domain; Glutathione S-transferase domain-containing protein complement(3295244..3295843) Nitrosomonas sp. Is79A3 10935220 YP_004696252.1 CDS Nit79A3_3115 NC_015731.1 3295891 3296613 R PFAM: Cytochrome c1; KEGG: nit:NAL212_2479 cytochrome c1; cytochrome c1 complement(3295891..3296613) Nitrosomonas sp. Is79A3 10935221 YP_004696253.1 CDS Nit79A3_3116 NC_015731.1 3296618 3297853 R PFAM: Cytochrome b/b6, N-terminal; Cytochrome b/b6, C-terminal; KEGG: nit:NAL212_2480 cytochrome b/b6 domain; Cytochrome b/b6 domain-containing protein complement(3296618..3297853) Nitrosomonas sp. Is79A3 10935222 YP_004696254.1 CDS Nit79A3_3117 NC_015731.1 3297854 3298462 R KEGG: nit:NAL212_2481 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: Ubiquinol-cytochrome c reductase, iron-sulphur subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; ubiquinol-cytochrome c reductase, iron-sulfur subunit complement(3297854..3298462) Nitrosomonas sp. Is79A3 10935223 YP_004696255.1 CDS Nit79A3_3118 NC_015731.1 3298680 3301412 R TIGRFAM: SecA protein; HAMAP: Protein translocase subunit secA; KEGG: nit:NAL212_2482 preprotein translocase, SecA subunit; PFAM: SecA DEAD-like; SecA preprotein cross-linking region; SecA Wing/Scaffold; SEC-C motif; Protein translocase subunit secA complement(3298680..3301412) Nitrosomonas sp. Is79A3 10935224 YP_004696256.1 CDS Nit79A3_3119 NC_015731.1 3301670 3302587 R PFAM: Peptidase M23; KEGG: nit:NAL212_2483 peptidase M23; peptidase M23 complement(3301670..3302587) Nitrosomonas sp. Is79A3 10935225 YP_004696257.1 CDS Nit79A3_3120 NC_015731.1 3302622 3303086 D PFAM: Protein of unknown function DUF721; KEGG: nit:NAL212_2484 hypothetical protein; hypothetical protein 3302622..3303086 Nitrosomonas sp. Is79A3 10935226 YP_004696258.1 CDS Nit79A3_3121 NC_015731.1 3303371 3305227 D PFAM: Ribonuclease II/R; KEGG: nit:NAL212_2487 ribonuclease II; ribonuclease II 3303371..3305227 Nitrosomonas sp. Is79A3 10935227 YP_004696259.1 CDS Nit79A3_3122 NC_015731.1 3305317 3306234 D TIGRFAM: TonB, C-terminal; KEGG: nit:NAL212_2488 TonB family protein; TonB family protein 3305317..3306234 Nitrosomonas sp. Is79A3 10935228 YP_004696260.1 CDS Nit79A3_3123 NC_015731.1 3306295 3307110 D TIGRFAM: Quinate/shikimate 5-dehydrogenase; HAMAP: Shikimate dehydrogenase; KEGG: nit:NAL212_2489 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Shikimate dehydrogenase 3306295..3307110 Nitrosomonas sp. Is79A3 10935229 YP_004696261.1 CDS Nit79A3_3124 NC_015731.1 3307445 3308884 D KEGG: nit:NAL212_2490 magnesium transporter; TIGRFAM: Divalent cation transporter; PFAM: Magnesium transporter, MgtE intracellular region; Cystathionine beta-synthase, core; MgtE integral membrane region; magnesium transporter 3307445..3308884 Nitrosomonas sp. Is79A3 10935230 YP_004696262.1 CDS Nit79A3_3125 NC_015731.1 3308895 3309407 D KEGG: eba:ebA6029 hypothetical protein; hypothetical protein 3308895..3309407 Nitrosomonas sp. Is79A3 10935231 YP_004696263.1 CDS Nit79A3_3126 NC_015731.1 3309512 3310180 D PFAM: NADPH-dependent FMN reductase; KEGG: aeh:Mlg_2714 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 3309512..3310180 Nitrosomonas sp. Is79A3 10935232 YP_004696264.1 CDS Nit79A3_3127 NC_015731.1 3310428 3310673 D PFAM: Protein of unknown function DUF2132; KEGG: psa:PST_1146 hypothetical protein; hypothetical protein 3310428..3310673 Nitrosomonas sp. Is79A3 10935233 YP_004696265.1 CDS Nit79A3_3128 NC_015731.1 3310670 3310882 D KEGG: pca:Pcar_2636 RNA-binding protein; RNA-binding protein 3310670..3310882 Nitrosomonas sp. Is79A3 10935234 YP_004696266.1 CDS Nit79A3_3129 NC_015731.1 3310963 3313158 D KEGG: nit:NAL212_1707 rRNA (guanine-N(2)-)-methyltransferase; HAMAP: S-adenosyl-L-dependent RNA methyltransferase, bacteria,; PFAM: RNA methylase; THUMP; Ribosomal RNA large subunit methyltransferase L 3310963..3313158 Nitrosomonas sp. Is79A3 10935235 YP_004696267.1 CDS Nit79A3_3130 NC_015731.1 3313326 3313520 D KEGG: nit:NAL212_0164 CopG family protein; CopG family transcriptional regulator 3313326..3313520 Nitrosomonas sp. Is79A3 10935236 YP_004696268.1 CDS Nit79A3_3131 NC_015731.1 3313549 3313890 D KEGG: nit:NAL212_0163 transcriptional modulator of MazE/toxin, MazF; manually curated; PFAM: PemK-like protein; transcriptional modulator of MazE/toxin, MazF 3313549..3313890 Nitrosomonas sp. Is79A3 10935237 YP_004696269.1 CDS Nit79A3_3132 NC_015731.1 3313969 3317121 R KEGG: nit:NAL212_0660 heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; CzcA family heavy metal efflux pump complement(3313969..3317121) Nitrosomonas sp. Is79A3 10935238 YP_004696270.1 CDS Nit79A3_3133 NC_015731.1 3317160 3318659 R KEGG: nit:NAL212_0661 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(3317160..3318659) Nitrosomonas sp. Is79A3 10935239 YP_004696271.1 CDS Nit79A3_3134 NC_015731.1 3318678 3320111 R PFAM: Outer membrane efflux protein; KEGG: nit:NAL212_0016 outer membrane efflux protein; outer membrane efflux protein complement(3318678..3320111) Nitrosomonas sp. Is79A3 10935240 YP_004696272.1 CDS Nit79A3_3135 NC_015731.1 3320224 3320610 R KEGG: nit:NAL212_0663 hypothetical protein; hypothetical protein complement(3320224..3320610) Nitrosomonas sp. Is79A3 10935241 YP_004696273.1 CDS Nit79A3_3136 NC_015731.1 3320826 3321422 R TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: nit:NAL212_0664 septum formation protein Maf; PFAM: Maf-like protein; Septum formation protein Maf complement(3320826..3321422) Nitrosomonas sp. Is79A3 10935242 YP_004696274.1 CDS Nit79A3_3137 NC_015731.1 3321490 3322005 D PFAM: Protein of unknown function DUF177; KEGG: nit:NAL212_0665 hypothetical protein; hypothetical protein 3321490..3322005 Nitrosomonas sp. Is79A3 10935243 YP_004696275.1 CDS Nit79A3_3138 NC_015731.1 3322024 3322203 D TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: nit:NAL212_0666 50S ribosomal protein L32; PFAM: Ribosomal protein L32p; 50S ribosomal protein L32 3322024..3322203 Nitrosomonas sp. Is79A3 10935244 YP_004696276.1 CDS Nit79A3_3139 NC_015731.1 3322270 3323310 D TIGRFAM: Phospholipid biosynthesis protein, PlsX like; HAMAP: Phospholipid biosynthesis protein, PlsX like; KEGG: nit:NAL212_0667 phosphate acyltransferase; PFAM: Fatty acid synthesis plsX protein; Phosphate acyltransferase 3322270..3323310 Nitrosomonas sp. Is79A3 10935245 YP_004696277.1 CDS Nit79A3_3140 NC_015731.1 3323310 3324266 D TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: nit:NAL212_0668 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-ACP synthase 3323310..3324266 Nitrosomonas sp. Is79A3 10935246 YP_004696278.1 CDS Nit79A3_3141 NC_015731.1 3324270 3325214 D KEGG: nit:NAL212_0669 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; malonyl CoA-ACP transacylase 3324270..3325214 Nitrosomonas sp. Is79A3 10935247 YP_004696279.1 CDS Nit79A3_3142 NC_015731.1 3325263 3326006 D KEGG: nit:NAL212_0670 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 3325263..3326006 Nitrosomonas sp. Is79A3 10935248 YP_004696280.1 CDS Nit79A3_3143 NC_015731.1 3326124 3326360 D TIGRFAM: Acyl carrier protein (ACP); HAMAP: Acyl carrier protein (ACP); KEGG: nit:NAL212_0671 acyl carrier protein; PFAM: Phosphopantetheine-binding; acyl carrier protein 3326124..3326360 Nitrosomonas sp. Is79A3 10935249 YP_004696281.1 CDS Nit79A3_3144 NC_015731.1 3326397 3327638 D KEGG: nit:NAL212_0672 3-oxoacyl-(acyl-carrier-protein) synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; 3-oxoacyl-ACP synthase 3326397..3327638 Nitrosomonas sp. Is79A3 10935250 YP_004696282.1 CDS Nit79A3_3145 NC_015731.1 3327662 3328657 D KEGG: nit:NAL212_0673 aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family YceG-like; PFAM: Uncharacterised protein family YceG-like; aminodeoxychorismate lyase 3327662..3328657 Nitrosomonas sp. Is79A3 10935251 YP_004696283.1 CDS Nit79A3_3146 NC_015731.1 3328705 3331293 D PFAM: Glycosyl transferase, family 2; GtrA-like protein; Glycosyl transferase, family 39; KEGG: nit:NAL212_0674 dolichyl-phosphate beta-D-mannosyltransferase; glycosyl transferase 2 3328705..3331293 Nitrosomonas sp. Is79A3 10935252 YP_004696284.1 CDS Nit79A3_3147 NC_015731.1 3331515 3331931 R KEGG: nit:NAL212_2635 hypothetical protein; hypothetical protein complement(3331515..3331931) Nitrosomonas sp. Is79A3 10935253 YP_004696285.1 CDS Nit79A3_3148 NC_015731.1 3331980 3332780 R PFAM: Zinc/iron permease; KEGG: nit:NAL212_2634 zinc/iron permease; zinc/iron permease complement(3331980..3332780) Nitrosomonas sp. Is79A3 10935254 YP_004696286.1 CDS Nit79A3_3149 NC_015731.1 3332853 3333599 R KEGG: nit:NAL212_2633 multi-copper polyphenol oxidoreductase, laccase; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase; Multi-copper polyphenol oxidoreductase, laccase complement(3332853..3333599) Nitrosomonas sp. Is79A3 10935255 YP_004696287.1 CDS Nit79A3_3150 NC_015731.1 3333832 3334992 D PFAM: Ankyrin repeat; KEGG: nit:NAL212_2632 ankyrin; Ankyrin 3333832..3334992 Nitrosomonas sp. Is79A3 10935256 YP_004696288.1 CDS Nit79A3_3151 NC_015731.1 3335007 3335759 D PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: nit:NAL212_2631 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 3335007..3335759 Nitrosomonas sp. Is79A3 10935257 YP_004696289.1 CDS Nit79A3_3152 NC_015731.1 3335756 3337345 D PFAM: FAD dependent oxidoreductase; KEGG: nit:NAL212_2630 glycerol-3-phosphate dehydrogenase; FAD dependent oxidoreductase 3335756..3337345 Nitrosomonas sp. Is79A3 10935258 YP_004696290.1 CDS Nit79A3_3153 NC_015731.1 3337330 3338736 D PFAM: Carbohydrate kinase, FGGY, N-terminal; KEGG: nit:NAL212_2629 glycerol kinase; carbohydrate kinase 3337330..3338736 Nitrosomonas sp. Is79A3 10935259 YP_004696291.1 CDS Nit79A3_3154 NC_015731.1 3338925 3339515 D KEGG: nit:NAL212_2628 hypothetical protein; hypothetical protein 3338925..3339515 Nitrosomonas sp. Is79A3 10935260 YP_004696292.1 CDS Nit79A3_3155 NC_015731.1 3339603 3340328 D PFAM: Glycosyl transferase, family 2; KEGG: nit:NAL212_2627 glycosyl transferase 2; glycosyl transferase 2 3339603..3340328 Nitrosomonas sp. Is79A3 10935261 YP_004696293.1 CDS Nit79A3_3156 NC_015731.1 3340627 3342066 D KEGG: ade:Adeh_2940 hypothetical protein; hypothetical protein 3340627..3342066 Nitrosomonas sp. Is79A3 10935262 YP_004696294.1 CDS Nit79A3_3157 NC_015731.1 3342516 3343907 D KEGG: dre:798921 si:ch211-217k17.9; hypothetical protein 3342516..3343907 Nitrosomonas sp. Is79A3 10935263 YP_004696295.1 CDS Nit79A3_3158 NC_015731.1 3344132 3346849 R KEGG: nit:NAL212_2584 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; P-type HAD superfamily ATPase complement(3344132..3346849) Nitrosomonas sp. Is79A3 10935264 YP_004696296.1 CDS Nit79A3_3159 NC_015731.1 3346949 3347506 D PFAM: Beta-lactamase hydrolase-like; KEGG: nit:NAL212_2585 beta-lactamase hydrolase-family protein; beta-lactamase hydrolase-family protein 3346949..3347506 Nitrosomonas sp. Is79A3 10935265 YP_004696297.1 CDS Nit79A3_3162 NC_015731.1 3350052 3350384 R KEGG: nit:NAL212_2589 regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR complement(3350052..3350384) Nitrosomonas sp. Is79A3 10935268 YP_004696298.1 CDS Nit79A3_3163 NC_015731.1 3350505 3350918 R PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: nit:NAL212_2590 hypothetical protein; hypothetical protein complement(3350505..3350918) Nitrosomonas sp. Is79A3 10935269 YP_004696299.1 CDS Nit79A3_3165 NC_015731.1 3351507 3352367 D KEGG: nit:NAL212_2592 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein 3351507..3352367 Nitrosomonas sp. Is79A3 10935271 YP_004696300.1 CDS Nit79A3_3166 NC_015731.1 3352491 3353504 R PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; KEGG: nit:NAL212_2593 heat shock protein DnaJ domain-containing protein; molecular chaperone DnaJ complement(3352491..3353504) Nitrosomonas sp. Is79A3 10935272 YP_004696301.1 CDS Nit79A3_3167 NC_015731.1 3353583 3353834 R hypothetical protein complement(3353583..3353834) Nitrosomonas sp. Is79A3 10935273 YP_004696302.1 CDS Nit79A3_3168 NC_015731.1 3353854 3354039 D PFAM: Hemin uptake protein hemP; KEGG: nit:NAL212_2594 hemin uptake protein HemP; Hemin uptake protein hemP 3353854..3354039 Nitrosomonas sp. Is79A3 10935274 YP_004696303.1 CDS Nit79A3_3169 NC_015731.1 3354255 3354719 D KEGG: nit:NAL212_2595 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein; bacterioferritin 3354255..3354719 Nitrosomonas sp. Is79A3 10935275 YP_004696304.1 CDS Nit79A3_3170 NC_015731.1 3354840 3355508 D KEGG: nit:NAL212_2596 hypothetical protein; hypothetical protein 3354840..3355508 Nitrosomonas sp. Is79A3 10935276 YP_004696305.1 CDS Nit79A3_3171 NC_015731.1 3355844 3356050 D KEGG: nit:NAL212_0699 hypothetical protein; hypothetical protein 3355844..3356050 Nitrosomonas sp. Is79A3 10935277 YP_004696306.1 CDS Nit79A3_3172 NC_015731.1 3356064 3356513 R KEGG: nit:NAL212_0698 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding; single-strand binding protein complement(3356064..3356513) Nitrosomonas sp. Is79A3 10935278 YP_004696307.1 CDS Nit79A3_3173 NC_015731.1 3356514 3357872 R PFAM: Major facilitator superfamily MFS-1; KEGG: nit:NAL212_0697 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(3356514..3357872) Nitrosomonas sp. Is79A3 10935279 YP_004696308.1 CDS Nit79A3_3174 NC_015731.1 3357966 3360785 D TIGRFAM: Excinuclease ABC, A subunit; HAMAP: UvrABC system protein A; KEGG: nit:NAL212_0696 excinuclease ABC, A subunit; PFAM: ABC transporter-like; UvrABC system protein A 3357966..3360785 Nitrosomonas sp. Is79A3 10935280 YP_004696309.1 CDS Nit79A3_3175 NC_015731.1 3360782 3362053 D PFAM: MOFRL; KEGG: nit:NAL212_0695 hydroxypyruvate reductase; MOFRL domain-containing protein 3360782..3362053 Nitrosomonas sp. Is79A3 10935281 YP_004696310.1 CDS Nit79A3_3176 NC_015731.1 3362043 3362609 R manually curated; KEGG: nit:NAL212_0694 hypothetical protein; hypothetical protein complement(3362043..3362609) Nitrosomonas sp. Is79A3 10935282 YP_004696311.1 CDS Nit79A3_3177 NC_015731.1 3362617 3363063 R KEGG: nit:NAL212_0693 hypothetical protein; hypothetical protein complement(3362617..3363063) Nitrosomonas sp. Is79A3 10935283 YP_004696312.1 CDS Nit79A3_3178 NC_015731.1 3363207 3364418 R PFAM: Porin, Gram-negative type; KEGG: nit:NAL212_0692 porin; porin complement(3363207..3364418) Nitrosomonas sp. Is79A3 10935284 YP_004696313.1 CDS Nit79A3_3179 NC_015731.1 3365258 3366250 D PFAM: YkuD domain; KEGG: nit:NAL212_0691 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 3365258..3366250 Nitrosomonas sp. Is79A3 10935285 YP_004696314.1 CDS Nit79A3_3180 NC_015731.1 3366355 3366645 R KEGG: nit:NAL212_0690 hypothetical protein; hypothetical protein complement(3366355..3366645) Nitrosomonas sp. Is79A3 10935286 YP_004696315.1 CDS Nit79A3_3182 NC_015731.1 3368509 3369015 R PFAM: YkuD domain; KEGG: nit:NAL212_0689 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(3368509..3369015) Nitrosomonas sp. Is79A3 10935288 YP_004696316.1 CDS Nit79A3_3183 NC_015731.1 3369158 3369403 D KEGG: gca:Galf_1570 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC; hydrogenase assembly chaperone hypC/hupF 3369158..3369403 Nitrosomonas sp. Is79A3 10935289 YP_004696317.1 CDS Nit79A3_3184 NC_015731.1 3369414 3370562 D KEGG: dar:Daro_3966 hydrogenase formation HypD protein; TIGRFAM: Hydrogenase formation HypD protein; PFAM: Hydrogenase formation HypD protein; hydrogenase expression/formation protein HypD 3369414..3370562 Nitrosomonas sp. Is79A3 10935290 YP_004696318.1 CDS Nit79A3_3185 NC_015731.1 3370562 3371620 D KEGG: rme:Rmet_1540 hydrogenase expression/formation protein HypE; TIGRFAM: Hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; hydrogenase expression/formation protein HypE 3370562..3371620 Nitrosomonas sp. Is79A3 10935291 YP_004696319.1 CDS Nit79A3_3186 NC_015731.1 3371592 3373331 D PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; Crotonase, core; KEGG: rme:Rmet_1541 formyl transferase-like protein; formyl transferase domain-containing protein 3371592..3373331 Nitrosomonas sp. Is79A3 10935292 YP_004696320.1 CDS Nit79A3_3187 NC_015731.1 3373360 3373803 R KEGG: nit:NAL212_0688 hypothetical protein; hypothetical protein complement(3373360..3373803) Nitrosomonas sp. Is79A3 10935293 YP_004696321.1 CDS Nit79A3_3188 NC_015731.1 3374265 3374819 R KEGG: nit:NAL212_1338 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(3374265..3374819) Nitrosomonas sp. Is79A3 10935294 YP_004696322.1 CDS Nit79A3_3189 NC_015731.1 3375314 3376555 D KEGG: nit:NAL212_0687 TraB family protein; TIGRFAM: Pheromone shutdown, TraB; PFAM: Pheromone shutdown-related, TraB; TraB family protein 3375314..3376555 Nitrosomonas sp. Is79A3 10935295 YP_004696323.1 CDS Nit79A3_3190 NC_015731.1 3376562 3378412 D KEGG: nit:NAL212_0686 xenobiotic-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 3376562..3378412 Nitrosomonas sp. Is79A3 10935296 YP_004696324.1 CDS Nit79A3_3191 NC_015731.1 3379075 3379599 D KEGG: nit:NAL212_0684 hypothetical protein; hypothetical protein 3379075..3379599 Nitrosomonas sp. Is79A3 10935297 YP_004696325.1 CDS Nit79A3_3192 NC_015731.1 3379907 3381919 D PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: nit:NAL212_0685 TonB-dependent receptor; TonB-dependent receptor 3379907..3381919 Nitrosomonas sp. Is79A3 10935298 YP_004696326.1 CDS Nit79A3_3193 NC_015731.1 3381990 3382586 D KEGG: nit:NAL212_0684 hypothetical protein; hypothetical protein 3381990..3382586 Nitrosomonas sp. Is79A3 10935299 YP_004696327.1 CDS Nit79A3_3194 NC_015731.1 3382586 3385351 D KEGG: nit:NAL212_0683 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; multi-sensor hybrid histidine kinase 3382586..3385351 Nitrosomonas sp. Is79A3 10935300 YP_004696328.1 CDS Nit79A3_3195 NC_015731.1 3385348 3387468 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: tbd:Tbd_1269 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase/phosphodiesterase 3385348..3387468 Nitrosomonas sp. Is79A3 10935301 YP_004696329.1 CDS Nit79A3_3196 NC_015731.1 3387455 3389392 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Metal-dependent hydrolase HDOD; Signal transduction response regulator, receiver region; KEGG: nit:NAL212_0682 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase 3387455..3389392 Nitrosomonas sp. Is79A3 10935302 YP_004696330.1 CDS Nit79A3_3197 NC_015731.1 3389560 3391638 D PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: gme:Gmet_1669 TonB-dependent receptor, plug; TonB-dependent receptor plug 3389560..3391638 Nitrosomonas sp. Is79A3 10935303 YP_004696331.1 CDS Nit79A3_3198 NC_015731.1 3391654 3392229 D KEGG: nit:NAL212_0684 hypothetical protein; hypothetical protein 3391654..3392229 Nitrosomonas sp. Is79A3 10935304 YP_004696332.1 CDS Nit79A3_3199 NC_015731.1 3392394 3393524 D PFAM: TonB-dependent receptor, plug; KEGG: gme:Gmet_1669 TonB-dependent receptor, plug; TonB-dependent receptor plug 3392394..3393524 Nitrosomonas sp. Is79A3 10935305 YP_004696333.1 CDS Nit79A3_3200 NC_015731.1 3393521 3395641 D PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: gme:Gmet_1669 TonB-dependent receptor, plug; TonB-dependent receptor plug 3393521..3395641 Nitrosomonas sp. Is79A3 10935306 YP_004696334.1 CDS Nit79A3_3201 NC_015731.1 3395641 3396237 D KEGG: nit:NAL212_0684 hypothetical protein; hypothetical protein 3395641..3396237 Nitrosomonas sp. Is79A3 10935307 YP_004696335.1 CDS Nit79A3_3202 NC_015731.1 3396522 3397403 D KEGG: nit:NAL212_1623 hypothetical protein; hypothetical protein 3396522..3397403 Nitrosomonas sp. Is79A3 10935308 YP_004696336.1 CDS Nit79A3_3203 NC_015731.1 3397457 3399103 R KEGG: rfr:Rfer_0477 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver region; Tetratricopeptide TPR-4; Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Signal transduction response regulator, receiver region; Tetratricopeptide repeat; response regulator receiver protein complement(3397457..3399103) Nitrosomonas sp. Is79A3 10935309 YP_004696337.1 CDS Nit79A3_3204 NC_015731.1 3399126 3399833 R KEGG: rfr:Rfer_0478 histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; histidine kinase complement(3399126..3399833) Nitrosomonas sp. Is79A3 10935310 YP_004696338.1 CDS Nit79A3_3205 NC_015731.1 3399941 3400729 R PFAM: Protein of unknown function DUF2063; KEGG: nhl:Nhal_2720 hypothetical protein; hypothetical protein complement(3399941..3400729) Nitrosomonas sp. Is79A3 10935311 YP_004696339.1 CDS Nit79A3_3206 NC_015731.1 3400707 3401564 R KEGG: nit:NAL212_0680 hypothetical protein; HAMAP: UPF0276 protein; PFAM: Protein of unknown function DUF692; hypothetical protein complement(3400707..3401564) Nitrosomonas sp. Is79A3 10935312 YP_004696340.1 CDS Nit79A3_3207 NC_015731.1 3401577 3401912 R KEGG: nit:NAL212_0679 hypothetical protein; hypothetical protein complement(3401577..3401912) Nitrosomonas sp. Is79A3 10935313 YP_004696341.1 CDS Nit79A3_3208 NC_015731.1 3402187 3402909 D KEGG: nit:NAL212_0678 hypothetical protein; hypothetical protein 3402187..3402909 Nitrosomonas sp. Is79A3 10935314 YP_004696342.1 CDS Nit79A3_3209 NC_015731.1 3403170 3404708 D manually curated; TIGRFAM: Flagellin assembly, membrane protein MviN; KEGG: nit:NAL212_0677 integral membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN; integral membrane protein MviN 3403170..3404708 Nitrosomonas sp. Is79A3 10935315 YP_004696343.1 CDS Nit79A3_3210 NC_015731.1 3404723 3405529 R KEGG: nit:NAL212_2662 hypothetical protein; TIGRFAM: Protein of unknown function DUF198; PFAM: Protein of unknown function DUF198; hypothetical protein complement(3404723..3405529) Nitrosomonas sp. Is79A3 10935316 YP_004696344.1 CDS Nit79A3_3211 NC_015731.1 3405633 3407477 R TIGRFAM: Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; KEGG: nit:NAL212_2663 deoxyxylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; Transketolase, C-terminal; 1-deoxy-D-xylulose-5-phosphate synthase complement(3405633..3407477) Nitrosomonas sp. Is79A3 10935317 YP_004696345.1 CDS Nit79A3_3212 NC_015731.1 3407514 3408407 R PFAM: Polyprenyl synthetase; KEGG: nit:NAL212_2664 geranyltranstransferase; polyprenyl synthetase complement(3407514..3408407) Nitrosomonas sp. Is79A3 10935318 YP_004696346.1 CDS Nit79A3_3213 NC_015731.1 3408397 3408648 R TIGRFAM: Exonuclease VII, small subunit; HAMAP: Exonuclease VII, small subunit; KEGG: nit:NAL212_2665 exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; Exodeoxyribonuclease 7 small subunit complement(3408397..3408648) Nitrosomonas sp. Is79A3 10935319 YP_004696347.1 CDS Nit79A3_3214 NC_015731.1 3409134 3409619 D KEGG: nit:NAL212_2666 hypothetical protein; hypothetical protein 3409134..3409619 Nitrosomonas sp. Is79A3 10935320 YP_004696348.1 CDS Nit79A3_3215 NC_015731.1 3409898 3411049 D KEGG: nit:NAL212_2667 hypothetical protein; hypothetical protein 3409898..3411049 Nitrosomonas sp. Is79A3 10935321 YP_004696349.1 CDS Nit79A3_3216 NC_015731.1 3411046 3411891 D KEGG: nit:NAL212_2668 hypothetical protein; hypothetical protein 3411046..3411891 Nitrosomonas sp. Is79A3 10935322 YP_004696350.1 CDS Nit79A3_3217 NC_015731.1 3411955 3413031 D PFAM: Permease YjgP/YjgQ, predicted; KEGG: nit:NAL212_2669 permease YjgP/YjgQ family protein; permease YjgP/YjgQ family protein 3411955..3413031 Nitrosomonas sp. Is79A3 10935323 YP_004696351.1 CDS Nit79A3_3218 NC_015731.1 3413028 3414089 D PFAM: Permease YjgP/YjgQ, predicted; KEGG: nit:NAL212_2670 permease YjgP/YjgQ family protein; permease YjgP/YjgQ family protein 3413028..3414089 Nitrosomonas sp. Is79A3 10935324 YP_004696352.1 CDS Nit79A3_3219 NC_015731.1 3414212 3415450 D KEGG: nit:NAL212_2671 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 3414212..3415450 Nitrosomonas sp. Is79A3 10935325 YP_004696353.1 CDS Nit79A3_3220 NC_015731.1 3415471 3417465 D PFAM: Diacylglycerol kinase, catalytic region; KEGG: nit:NAL212_2672 diacylglycerol kinase catalytic region; diacylglycerol kinase catalytic region 3415471..3417465 Nitrosomonas sp. Is79A3 10935326 YP_004696354.1 CDS Nit79A3_3221 NC_015731.1 3417537 3418181 D KEGG: nit:NAL212_2673 hypothetical protein; hypothetical protein 3417537..3418181 Nitrosomonas sp. Is79A3 10935327 YP_004696355.1 CDS Nit79A3_3222 NC_015731.1 3418321 3418857 D PFAM: YaeQ; KEGG: nit:NAL212_2674 YaeQ family protein; YaeQ family protein 3418321..3418857 Nitrosomonas sp. Is79A3 10935328 YP_004696356.1 CDS Nit79A3_3223 NC_015731.1 3419040 3419996 R hypothetical protein complement(3419040..3419996) Nitrosomonas sp. Is79A3 10935329 YP_004696357.1 CDS Nit79A3_3224 NC_015731.1 3420133 3420501 R KEGG: nit:NAL212_2676 hypothetical protein; hypothetical protein complement(3420133..3420501) Nitrosomonas sp. Is79A3 10935330 YP_004696358.1 CDS Nit79A3_3225 NC_015731.1 3420984 3421631 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: nit:NAL212_2677 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 3420984..3421631 Nitrosomonas sp. Is79A3 10935331 YP_004696359.1 CDS Nit79A3_3226 NC_015731.1 3421618 3422019 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: nit:NAL212_2678 biopolymer transport protein ExbD/TolR; Biopolymer transport protein ExbD/TolR 3421618..3422019 Nitrosomonas sp. Is79A3 10935332 YP_004696360.1 CDS Nit79A3_3227 NC_015731.1 3422031 3422906 D KEGG: nit:NAL212_2679 hypothetical protein; hypothetical protein 3422031..3422906 Nitrosomonas sp. Is79A3 10935333 YP_004696361.1 CDS Nit79A3_3228 NC_015731.1 3422918 3423433 R KEGG: nit:NAL212_2686 hypothetical protein; hypothetical protein complement(3422918..3423433) Nitrosomonas sp. Is79A3 10935334 YP_004696362.1 CDS Nit79A3_3229 NC_015731.1 3423430 3424032 R PFAM: Glycoside hydrolase, family 19, catalytic; KEGG: nit:NAL212_2687 glycoside hydrolase 19; glycoside hydrolase 19 complement(3423430..3424032) Nitrosomonas sp. Is79A3 10935335 YP_004696363.1 CDS Nit79A3_3230 NC_015731.1 3424133 3425926 D TIGRFAM: DNA mismatch repair protein, N-terminal; HAMAP: DNA mismatch repair protein mutL; KEGG: nit:NAL212_2688 DNA mismatch repair protein MutL; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATP-binding region, ATPase-like; DNA mismatch repair protein mutL 3424133..3425926 Nitrosomonas sp. Is79A3 10935336 YP_004696364.1 CDS Nit79A3_3231 NC_015731.1 3426043 3427449 D KEGG: ttu:TERTU_4249 hypothetical protein; hypothetical protein 3426043..3427449 Nitrosomonas sp. Is79A3 10935337 YP_004696365.1 CDS Nit79A3_3232 NC_015731.1 3427583 3428413 R KEGG: nit:NAL212_2939 hypothetical protein; HAMAP: Protein of unknown function DUF299, phosphotransferase, predicted; PFAM: Protein of unknown function DUF299, phosphotransferase, predicted; phosphotransferase ydiA complement(3427583..3428413) Nitrosomonas sp. Is79A3 10935338 YP_004696366.1 CDS Nit79A3_3233 NC_015731.1 3428410 3430788 R KEGG: nit:NAL212_2940 phosphoenolpyruvate synthase; TIGRFAM: Phosphoenolpyruvate synthase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; PEP-utilising enzyme; phosphoenolpyruvate synthase complement(3428410..3430788) Nitrosomonas sp. Is79A3 10935339 YP_004696367.1 CDS Nit79A3_3234 NC_015731.1 3430821 3431774 R PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nit:NAL212_2941 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3430821..3431774) Nitrosomonas sp. Is79A3 10935340 YP_004696368.1 CDS Nit79A3_3235 NC_015731.1 3431952 3433427 D KEGG: nit:NAL212_2942 ribulose-bisphosphate carboxylase; HAMAP: Ribulose bisphosphate carboxylase large chain; PFAM: Ribulose bisphosphate carboxylase, large subunit, C-terminal; Ribulose bisphosphate carboxylase, large subunit, N-terminal; Ribulose bisphosphate carboxylase large chain 3431952..3433427 Nitrosomonas sp. Is79A3 10935341 YP_004696369.1 CDS Nit79A3_3236 NC_015731.1 3433448 3433882 D PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: nit:NAL212_2943 ribulose-bisphosphate carboxylase; ribulose bisphosphate carboxylase small chain 3433448..3433882 Nitrosomonas sp. Is79A3 10935342 YP_004696370.1 CDS Nit79A3_3237 NC_015731.1 3434048 3434989 D TIGRFAM: CbxX/CfqX, monofunctional; PFAM: ATPase, AAA-type, core; KEGG: nit:NAL212_2944 CbbX protein; SMART: ATPase, AAA+ type, core; CbbX protein 3434048..3434989 Nitrosomonas sp. Is79A3 10935343 YP_004696371.1 CDS Nit79A3_3238 NC_015731.1 3435016 3435360 D KEGG: nit:NAL212_2945 hypothetical protein; hypothetical protein 3435016..3435360 Nitrosomonas sp. Is79A3 10935344 YP_004696372.1 CDS Nit79A3_3239 NC_015731.1 3435399 3436619 D KEGG: nit:NAL212_2946 ketose-bisphosphate aldolase; TIGRFAM: Ketose-bisphosphate aldolase, class-II; PFAM: Ketose-bisphosphate aldolase, class-II; ketose-bisphosphate aldolase 3435399..3436619 Nitrosomonas sp. Is79A3 10935345 YP_004696373.1 CDS Nit79A3_3240 NC_015731.1 3436718 3437413 R KEGG: mpo:Mpop_2666 peptidoglycan-binding domain 1 protein; TIGRFAM: Conserved hypothetical protein CHP02594; PFAM: Peptidoglycan binding-like; hypothetical protein complement(3436718..3437413) Nitrosomonas sp. Is79A3 10935346 YP_004696374.1 CDS Nit79A3_3241 NC_015731.1 3437504 3442093 R KEGG: nit:NAL212_0414 CheA signal transduction histidine kinase; PFAM: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; CheW-like protein; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; CheW-like protein; CheA signal transduction histidine kinase complement(3437504..3442093) Nitrosomonas sp. Is79A3 10935347 YP_004696375.1 CDS Nit79A3_3242 NC_015731.1 3442135 3444243 R KEGG: nit:NAL212_0413 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; methyl-accepting chemotaxis sensory transducer complement(3442135..3444243) Nitrosomonas sp. Is79A3 10935348 YP_004696376.1 CDS Nit79A3_3243 NC_015731.1 3444516 3446027 R KEGG: nit:NAL212_0412 threonine dehydratase, biosynthetic; TIGRFAM: Threonine dehydratase I; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal; threonine dehydratase complement(3444516..3446027) Nitrosomonas sp. Is79A3 10935349 YP_004696377.1 CDS Nit79A3_3244 NC_015731.1 3446260 3446550 D PFAM: Nucleotidyltransferase; KEGG: nhl:Nhal_0891 DNA polymerase beta domain protein region; DNA polymerase beta domain-containing protein 3446260..3446550 Nitrosomonas sp. Is79A3 10935350 YP_004696378.1 CDS Nit79A3_3245 NC_015731.1 3446543 3446899 D PFAM: Protein of unknown function DUF86; KEGG: nhl:Nhal_0890 protein of unknown function DUF86; hypothetical protein 3446543..3446899 Nitrosomonas sp. Is79A3 10935351 YP_004696379.1 CDS Nit79A3_3246 NC_015731.1 3446991 3447287 D hypothetical protein 3446991..3447287 Nitrosomonas sp. Is79A3 10935352 YP_004696380.1 CDS Nit79A3_3247 NC_015731.1 3447290 3448324 R KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase complement(3447290..3448324) Nitrosomonas sp. Is79A3 10935353 YP_004696381.1 CDS Nit79A3_3248 NC_015731.1 3448336 3449052 D hypothetical protein 3448336..3449052 Nitrosomonas sp. Is79A3 10935354 YP_004696382.1 CDS Nit79A3_3249 NC_015731.1 3449064 3450497 R PFAM: Exonuclease C-terminal; Exonuclease, RNase T/DNA polymerase III; KEGG: nit:NAL212_2927 exodeoxyribonuclease I; exonuclease complement(3449064..3450497) Nitrosomonas sp. Is79A3 10935355 YP_004696383.1 CDS Nit79A3_3250 NC_015731.1 3450615 3451004 D PFAM: Endoribonuclease L-PSP; KEGG: nit:NAL212_2926 endoribonuclease L-PSP; endoribonuclease L-PSP 3450615..3451004 Nitrosomonas sp. Is79A3 10935356 YP_004696384.1 CDS Nit79A3_3251 NC_015731.1 3451144 3451986 R KEGG: nit:NAL212_2925 hypothetical protein; hypothetical protein complement(3451144..3451986) Nitrosomonas sp. Is79A3 10935357 YP_004696385.1 CDS Nit79A3_3252 NC_015731.1 3452026 3452409 R PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal; KEGG: nit:NAL212_2924 type II secretion system protein G; type II secretion system protein G complement(3452026..3452409) Nitrosomonas sp. Is79A3 10935358 YP_004696386.1 CDS Nit79A3_3253 NC_015731.1 3452415 3452927 R KEGG: nit:NAL212_2923 general secretion pathway GspG related transmembrane protein; general secretion pathway GspG related transmembrane protein complement(3452415..3452927) Nitrosomonas sp. Is79A3 10935359 YP_004696387.1 CDS Nit79A3_3254 NC_015731.1 3452935 3455220 R PFAM: Type II/III secretion system; Secretin/TonB, short N-terminal; NolW-like; KEGG: nit:NAL212_2922 type II and III secretion system protein; type II and III secretion system protein complement(3452935..3455220) Nitrosomonas sp. Is79A3 10935360 YP_004696388.1 CDS Nit79A3_3255 NC_015731.1 3455217 3455777 R KEGG: nit:NAL212_2921 prolin-rich transmembrane protein; prolin-rich transmembrane protein complement(3455217..3455777) Nitrosomonas sp. Is79A3 10935361 YP_004696389.1 CDS Nit79A3_3256 NC_015731.1 3455783 3456379 R KEGG: nit:NAL212_2920 transmembrane protein; transmembrane protein complement(3455783..3456379) Nitrosomonas sp. Is79A3 10935362 YP_004696390.1 CDS Nit79A3_3257 NC_015731.1 3456361 3456912 R KEGG: nit:NAL212_2919 fimbrial assembly family protein; fimbrial assembly family protein complement(3456361..3456912) Nitrosomonas sp. Is79A3 10935363 YP_004696391.1 CDS Nit79A3_3258 NC_015731.1 3456900 3457733 R KEGG: nit:NAL212_2918 hypothetical protein; hypothetical protein complement(3456900..3457733) Nitrosomonas sp. Is79A3 10935364 YP_004696392.1 CDS Nit79A3_3259 NC_015731.1 3457714 3459405 R PFAM: Type II secretion system protein E; KEGG: nit:NAL212_2917 type II secretion system protein E; type II secretion system protein E complement(3457714..3459405) Nitrosomonas sp. Is79A3 10935365 YP_004696393.1 CDS Nit79A3_3260 NC_015731.1 3459402 3460586 R PFAM: Type II secretion system F domain; KEGG: nit:NAL212_2916 type II secretion system F domain; Type II secretion system F domain-containing protein complement(3459402..3460586) Nitrosomonas sp. Is79A3 10935366 YP_004696394.1 CDS Nit79A3_3261 NC_015731.1 3460596 3461030 R KEGG: nit:NAL212_2915 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal; general secretion pathway protein G complement(3460596..3461030) Nitrosomonas sp. Is79A3 10935367 YP_004696395.1 CDS Nit79A3_3262 NC_015731.1 3461180 3461863 R PFAM: Peptidase, membrane zinc metallopeptidase, KEGG: nit:NAL212_2914 peptidase membrane zinc metallopeptidase; peptidase membrane zinc metallopeptidase complement(3461180..3461863) Nitrosomonas sp. Is79A3 10935368 YP_004696396.1 CDS Nit79A3_3263 NC_015731.1 3462727 3466767 D TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; MASE1; PAS fold-4; PAS fold-3; PAS fold; Signal transduction response regulator, receiver region; KEGG: shl:Shal_0720 multi-sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS; Signal transduction response regulator, receiver region; multi-sensor hybrid histidine kinase 3462727..3466767 Nitrosomonas sp. Is79A3 10935369 YP_004696397.1 CDS Nit79A3_3264 NC_015731.1 3466810 3467040 D PFAM: SirA-like; KEGG: nit:NAL212_2870 SirA-like domain-containing protein; SirA-like domain-containing protein 3466810..3467040 Nitrosomonas sp. Is79A3 10935370 YP_004696398.1 CDS Nit79A3_3265 NC_015731.1 3467234 3468592 R PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: nit:NAL212_3080 peptidase U62 modulator of DNA gyrase; peptidase U62 complement(3467234..3468592) Nitrosomonas sp. Is79A3 10935371 YP_004696399.1 CDS Nit79A3_3266 NC_015731.1 3468726 3469238 D KEGG: nit:NAL212_3079 hypothetical protein; HAMAP: UPF0307 protein yjgA; PFAM: Uncharacterised protein family UPF0307; hypothetical protein 3468726..3469238 Nitrosomonas sp. Is79A3 10935372 YP_004696400.1 CDS Nit79A3_3267 NC_015731.1 3469418 3469945 D hypothetical protein 3469418..3469945 Nitrosomonas sp. Is79A3 10935373 YP_004696401.1 CDS Nit79A3_3268 NC_015731.1 3470329 3471378 D KEGG: nit:NAL212_3093 hypothetical protein; hypothetical protein 3470329..3471378 Nitrosomonas sp. Is79A3 10935374 YP_004696402.1 CDS Nit79A3_3269 NC_015731.1 3471483 3472886 R PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: ddr:Deide_01740 peptidase S8/S53 subtilisin kexin sedolisin; peptidase S8 and S53 subtilisin kexin sedolisin complement(3471483..3472886) Nitrosomonas sp. Is79A3 10935375 YP_004696403.1 CDS Nit79A3_3270 NC_015731.1 3473021 3473494 R PFAM: Ion transport 2; KEGG: nit:NAL212_0194 ion transport 2 domain-containing protein; Ion transport 2 domain-containing protein complement(3473021..3473494) Nitrosomonas sp. Is79A3 10935376 YP_004696404.1 CDS Nit79A3_3271 NC_015731.1 3473665 3474477 D KEGG: nit:NAL212_0193 hypothetical protein; hypothetical protein 3473665..3474477 Nitrosomonas sp. Is79A3 10935377 YP_004696405.1 CDS Nit79A3_3272 NC_015731.1 3474523 3478692 R TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; MASE1; PAS fold-3; PAS fold-4; KEGG: nit:NAL212_0894 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAC motif; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(3474523..3478692) Nitrosomonas sp. Is79A3 10935378 YP_004696406.1 CDS Nit79A3_3273 NC_015731.1 3478949 3479077 D hypothetical protein 3478949..3479077 Nitrosomonas sp. Is79A3 10935379 YP_004696407.1 CDS Nit79A3_3274 NC_015731.1 3479055 3480791 R KEGG: nit:NAL212_2971 xenobiotic-transporting ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; ABC transporter complement(3479055..3480791) Nitrosomonas sp. Is79A3 10935380 YP_004696408.1 CDS Nit79A3_3275 NC_015731.1 3480842 3481531 R TIGRFAM: Lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter-like; KEGG: nit:NAL212_2970 lipoprotein releasing system, ATP-binding protein; SMART: ATPase, AAA+ type, core; lipoprotein releasing system, ATP-binding protein complement(3480842..3481531) Nitrosomonas sp. Is79A3 10935381 YP_004696409.1 CDS Nit79A3_3276 NC_015731.1 3481524 3482771 R KEGG: nit:NAL212_2969 lipoprotein releasing system, transmembrane protein, LolC/E family; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Protein of unknown function DUF214, permase predicted; lipoprotein releasing system, transmembrane protein, LolC/E family complement(3481524..3482771) Nitrosomonas sp. Is79A3 10935382 YP_004696410.1 CDS Nit79A3_3277 NC_015731.1 3482881 3483600 R KEGG: nit:NAL212_2968 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; Crp/Fnr family transcriptional regulator complement(3482881..3483600) Nitrosomonas sp. Is79A3 10935383 YP_004696411.1 CDS Nit79A3_3278 NC_015731.1 3483853 3485262 D PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 3483853..3485262 Nitrosomonas sp. Is79A3 10935384 YP_004696412.1 CDS Nit79A3_3279 NC_015731.1 3485418 3486071 D KEGG: sbm:Shew185_3408 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver 3485418..3486071 Nitrosomonas sp. Is79A3 10935385 YP_004696413.1 CDS Nit79A3_3280 NC_015731.1 3486088 3486591 R KEGG: nit:NAL212_2967 rare lipoprotein A; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Rare lipoprotein A; rare lipoprotein A complement(3486088..3486591) Nitrosomonas sp. Is79A3 10935386 YP_004696414.1 CDS Nit79A3_3282 NC_015731.1 3486983 3488038 R PFAM: Secretion protein HlyD; KEGG: nit:NAL212_0608 secretion protein HlyD family protein; secretion protein HlyD family protein complement(3486983..3488038) Nitrosomonas sp. Is79A3 10935388 YP_004696415.1 CDS Nit79A3_3283 NC_015731.1 3488022 3490205 R KEGG: nit:NAL212_0609 hypothetical protein; hypothetical protein complement(3488022..3490205) Nitrosomonas sp. Is79A3 10935389 YP_004696416.1 CDS Nit79A3_3284 NC_015731.1 3490202 3491530 R PFAM: Glycosyl transferase, family 2; KEGG: nit:NAL212_0610 glycosyl transferase 2; glycosyl transferase 2 complement(3490202..3491530) Nitrosomonas sp. Is79A3 10935390 YP_004696417.1 CDS Nit79A3_3285 NC_015731.1 3491534 3492961 R KEGG: nit:NAL212_0611 hypothetical protein; hypothetical protein complement(3491534..3492961) Nitrosomonas sp. Is79A3 10935391 YP_004696418.1 CDS Nit79A3_3287 NC_015731.1 3494070 3495332 R PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: nit:NAL212_0833 subtilisin; peptidase S8 and S53 subtilisin kexin sedolisin complement(3494070..3495332) Nitrosomonas sp. Is79A3 10935393 YP_004696419.1 CDS Nit79A3_3288 NC_015731.1 3495342 3496043 R KEGG: nit:NAL212_0834 hypothetical protein; hypothetical protein complement(3495342..3496043) Nitrosomonas sp. Is79A3 10935394 YP_004696420.1 CDS Nit79A3_3289 NC_015731.1 3496046 3496648 R KEGG: nit:NAL212_0835 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(3496046..3496648) Nitrosomonas sp. Is79A3 10935395 YP_004696421.1 CDS Nit79A3_3290 NC_015731.1 3496756 3497496 R TIGRFAM: Conserved hypothetical protein CHP02001; KEGG: nit:NAL212_0836 hypothetical protein; hypothetical protein complement(3496756..3497496) Nitrosomonas sp. Is79A3 10935396 YP_004696422.1 CDS Nit79A3_3292 NC_015731.1 3498021 3498185 D hypothetical protein 3498021..3498185 Nitrosomonas sp. Is79A3 10935398 YP_004696423.1 CDS Nit79A3_3293 NC_015731.1 3498143 3499990 D KEGG: nit:NAL212_2961 multicopper oxidase type 1; multicopper oxidase type 1 3498143..3499990 Nitrosomonas sp. Is79A3 10935399 YP_004696424.1 CDS Nit79A3_3294 NC_015731.1 3500075 3500728 D KEGG: nit:NAL212_2960 hypothetical protein; hypothetical protein 3500075..3500728 Nitrosomonas sp. Is79A3 10935400 YP_004696425.1 CDS Nit79A3_3295 NC_015731.1 3500846 3501919 D KEGG: kse:Ksed_21480 hypothetical protein; hypothetical protein 3500846..3501919 Nitrosomonas sp. Is79A3 10935401 YP_004696426.1 CDS Nit79A3_3296 NC_015731.1 3501948 3503684 D KEGG: aar:Acear_0669 ABC transporter; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; ABC transporter 3501948..3503684 Nitrosomonas sp. Is79A3 10935402 YP_004696427.1 CDS Nit79A3_3297 NC_015731.1 3503711 3504553 D KEGG: amd:AMED_5380 hypothetical protein; hypothetical protein 3503711..3504553 Nitrosomonas sp. Is79A3 10935403 YP_004696428.1 CDS Nit79A3_3298 NC_015731.1 3504661 3506001 D PFAM: Phosphate-selective porin O/P; KEGG: mei:Msip34_2149 phosphate-selective porin O and P; phosphate-selective porin O and P 3504661..3506001 Nitrosomonas sp. Is79A3 10935404 YP_004696429.1 CDS Nit79A3_3299 NC_015731.1 3506157 3506675 D PFAM: Polyketide cyclase/dehydrase; KEGG: nit:NAL212_0676 polyketide cyclase/dehydrase; polyketide cyclase/dehydrase 3506157..3506675 Nitrosomonas sp. Is79A3 10935405 YP_004696430.1 CDS Nit79A3_3300 NC_015731.1 3506675 3507709 D PFAM: O-methyltransferase, family 2; KEGG: nhl:Nhal_1752 O-methyltransferase 2; O-methyltransferase 2 3506675..3507709 Nitrosomonas sp. Is79A3 10935406 YP_004696431.1 CDS Nit79A3_3301 NC_015731.1 3507777 3509189 R PFAM: GTP-binding protein, HSR1-related; KEGG: nit:NAL212_2911 hypothetical protein; GTP-binding protein HSR1-like protein complement(3507777..3509189) Nitrosomonas sp. Is79A3 10935407 YP_004696432.1 CDS Nit79A3_3302 NC_015731.1 3509193 3510575 R KEGG: nit:NAL212_2910 hypothetical protein; hypothetical protein complement(3509193..3510575) Nitrosomonas sp. Is79A3 10935408 YP_004696433.1 CDS Nit79A3_3303 NC_015731.1 3510744 3511445 D PFAM: Glutamine amidotransferase class-I, C-terminal; KEGG: nit:NAL212_2909 glutamine amidotransferase class-I; glutamine amidotransferase class-I 3510744..3511445 Nitrosomonas sp. Is79A3 10935409 YP_004696434.1 CDS Nit79A3_3304 NC_015731.1 3511468 3511728 R KEGG: neu:NE1352 hypothetical protein; TIGRFAM: Addiction module toxin, Txe/YoeB; PFAM: Addiction module toxin, Txe/YoeB; Txe/YoeB family addiction module toxin complement(3511468..3511728) Nitrosomonas sp. Is79A3 10935410 YP_004696435.1 CDS Nit79A3_3305 NC_015731.1 3511728 3511970 R TIGRFAM: Prevent-host-death protein; KEGG: nwa:Nwat_1548 prevent-host-death family protein; prevent-host-death family protein complement(3511728..3511970) Nitrosomonas sp. Is79A3 10935411 YP_004696436.1 CDS Nit79A3_3306 NC_015731.1 3512083 3514881 R PFAM: Sulphatase-modifying factor; KEGG: app:CAP2UW1_2305 hypothetical protein; sulfatase-modifying factor protein complement(3512083..3514881) Nitrosomonas sp. Is79A3 10935412 YP_004696437.1 CDS Nit79A3_3307 NC_015731.1 3515232 3516482 R KEGG: mca:MCA1289 hypothetical protein; hypothetical protein complement(3515232..3516482) Nitrosomonas sp. Is79A3 10935413 YP_004696438.1 CDS Nit79A3_3308 NC_015731.1 3516691 3517527 R KEGG: mme:Marme_2705 hypothetical protein; hypothetical protein complement(3516691..3517527) Nitrosomonas sp. Is79A3 10935414 YP_004696439.1 CDS Nit79A3_3309 NC_015731.1 3517597 3518607 R PFAM: Protein of unknown function DUF457, transmembrane; KEGG: nit:NAL212_2873 hypothetical protein; hypothetical protein complement(3517597..3518607) Nitrosomonas sp. Is79A3 10935415 YP_004696440.1 CDS Nit79A3_3310 NC_015731.1 3518754 3520181 R KEGG: pat:Patl_2702 alkaline phosphatase; alkaline phosphatase complement(3518754..3520181) Nitrosomonas sp. Is79A3 10935416 YP_004696441.1 CDS Nit79A3_3311 NC_015731.1 3520417 3522969 D KEGG: nit:NAL212_2974 dicarboxylate transport; dicarboxylate transport 3520417..3522969 Nitrosomonas sp. Is79A3 10935417 YP_004696442.1 CDS Nit79A3_3312 NC_015731.1 3523071 3523286 D KEGG: nit:NAL212_2973 hypothetical protein; hypothetical protein 3523071..3523286 Nitrosomonas sp. Is79A3 10935418 YP_004696443.1 CDS Nit79A3_3313 NC_015731.1 3523312 3523662 D PFAM: Uncharacterised conserved protein UCP025560; KEGG: nit:NAL212_2972 hypothetical protein; hypothetical protein 3523312..3523662 Nitrosomonas sp. Is79A3 10935419 YP_004696444.1 CDS Nit79A3_3314 NC_015731.1 3523964 3525052 D PFAM: Haemolysin-type calcium-binding region; KEGG: nit:NAL212_0192 hypothetical protein; Hemolysin-type calcium-binding protein 3523964..3525052 Nitrosomonas sp. Is79A3 10935420 YP_004696445.1 CDS Nit79A3_3315 NC_015731.1 3525122 3526354 R KEGG: nit:NAL212_0191 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; HAMAP: Multifunctional CCA protein; PFAM: Polynucleotide adenylyltransferase region; Metal-dependent phosphohydrolase, HD region, subdomain; polynucleotide adenylyltransferase complement(3525122..3526354) Nitrosomonas sp. Is79A3 10935421 YP_004696446.1 CDS Nit79A3_3316 NC_015731.1 3526397 3528313 R PFAM: Lytic transglycosylase-like, catalytic; KEGG: nit:NAL212_0190 lytic transglycosylase catalytic; lytic transglycosylase complement(3526397..3528313) Nitrosomonas sp. Is79A3 10935422 YP_004696447.1 CDS Nit79A3_3317 NC_015731.1 3528471 3529814 R PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; KEGG: nit:NAL212_0189 glutamate dehydrogenase (NADP(+)); Glu/Leu/Phe/Val dehydrogenase complement(3528471..3529814) Nitrosomonas sp. Is79A3 10935423 YP_004696448.1 CDS Nit79A3_3318 NC_015731.1 3530244 3534629 D KEGG: see:SNSL254_p_0173 rhs family protein; TIGRFAM: RHS repeat-associated core domain-containing protein; YD repeat; PFAM: YD repeat; RHS repeat-associated core domain-containing protein 3530244..3534629 Nitrosomonas sp. Is79A3 10935424 YP_004696449.1 CDS Nit79A3_3319 NC_015731.1 3534632 3535135 D KEGG: ecl:EcolC_0116 hypothetical protein; hypothetical protein 3534632..3535135 Nitrosomonas sp. Is79A3 10935425 YP_004696450.1 CDS Nit79A3_3321 NC_015731.1 3535614 3536126 D hypothetical protein 3535614..3536126 Nitrosomonas sp. Is79A3 10935427 YP_004696451.1 CDS Nit79A3_3322 NC_015731.1 3536229 3536546 D hypothetical protein 3536229..3536546 Nitrosomonas sp. Is79A3 10935428 YP_004696452.1 CDS Nit79A3_3323 NC_015731.1 3536543 3537019 D hypothetical protein 3536543..3537019 Nitrosomonas sp. Is79A3 10935429 YP_004696453.1 CDS Nit79A3_3324 NC_015731.1 3537383 3537892 D KEGG: xal:XALc_2110 hypothetical protein; hypothetical protein 3537383..3537892 Nitrosomonas sp. Is79A3 10935430 YP_004696454.1 CDS Nit79A3_3325 NC_015731.1 3537980 3538243 D hypothetical protein 3537980..3538243 Nitrosomonas sp. Is79A3 10935431 YP_004696455.1 CDS Nit79A3_3326 NC_015731.1 3538830 3540038 D KEGG: nit:NAL212_3097 hypothetical protein; hypothetical protein 3538830..3540038 Nitrosomonas sp. Is79A3 10935432 YP_004696456.1 CDS Nit79A3_3327 NC_015731.1 3540688 3542490 R TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; KEGG: rfr:Rfer_1870 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ; SMART: HAMP linker domain; PAS; ATP-binding region, ATPase-like; multi-sensor signal transduction histidine kinase complement(3540688..3542490) Nitrosomonas sp. Is79A3 10935433 YP_004696457.1 CDS Nit79A3_3329 NC_015731.1 3543170 3543679 D KEGG: net:Neut_1845 transmembrane protein; transmembrane protein 3543170..3543679 Nitrosomonas sp. Is79A3 10935435 YP_004696458.1 CDS Nit79A3_3330 NC_015731.1 3543781 3544368 D PFAM: MTH538 TIR-like domain; KEGG: gca:Galf_1431 hypothetical protein; hypothetical protein 3543781..3544368 Nitrosomonas sp. Is79A3 10935436 YP_004696459.1 CDS Nit79A3_3331 NC_015731.1 3544713 3545006 R KEGG: nit:NAL212_2828 hypothetical protein; hypothetical protein complement(3544713..3545006) Nitrosomonas sp. Is79A3 10935437 YP_004696460.1 CDS Nit79A3_3332 NC_015731.1 3545283 3545630 R PFAM: Protein of unknown function DUF488; KEGG: blb:BBMN68_520 protein; hypothetical protein complement(3545283..3545630) Nitrosomonas sp. Is79A3 10935438 YP_004696461.1 CDS Nit79A3_3333 NC_015731.1 3545627 3545842 R hypothetical protein complement(3545627..3545842) Nitrosomonas sp. Is79A3 10935439 YP_004696462.1 CDS Nit79A3_3334 NC_015731.1 3546077 3546196 R hypothetical protein complement(3546077..3546196) Nitrosomonas sp. Is79A3 10935440 YP_004696463.1 CDS Nit79A3_3335 NC_015731.1 3546334 3546543 R KEGG: nit:NAL212_1377 hypothetical protein; hypothetical protein complement(3546334..3546543) Nitrosomonas sp. Is79A3 10935441 YP_004696464.1 CDS Nit79A3_3336 NC_015731.1 3546880 3547791 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nit:NAL212_1375 transcriptional regulator, LysR family; LysR family transcriptional regulator 3546880..3547791 Nitrosomonas sp. Is79A3 10935442 YP_004696465.1 CDS Nit79A3_3337 NC_015731.1 3548125 3548583 D KEGG: nit:NAL212_1947 hypothetical protein; hypothetical protein 3548125..3548583 Nitrosomonas sp. Is79A3 10935443 YP_004696466.1 CDS Nit79A3_3338 NC_015731.1 3548918 3550240 D PFAM: Protein of unknown function DUF1597; KEGG: nit:NAL212_2794 hypothetical protein; hypothetical protein 3548918..3550240 Nitrosomonas sp. Is79A3 10935444 YP_004696467.1 CDS Nit79A3_3339 NC_015731.1 3550879 3551541 D PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; KEGG: nit:NAL212_2981 protocatechuate 3,4-dioxygenase; intradiol ring-cleavage dioxygenase 3550879..3551541 Nitrosomonas sp. Is79A3 10935445 YP_004696468.1 CDS Nit79A3_3340 NC_015731.1 3551545 3552495 D KEGG: nit:NAL212_2980 thioredoxin reductase; TIGRFAM: Thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 3551545..3552495 Nitrosomonas sp. Is79A3 10935446 YP_004696469.1 CDS Nit79A3_3341 NC_015731.1 3552552 3553100 D KEGG: nit:NAL212_2979 Smr protein/MutS2; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal; Smr protein/MutS2 3552552..3553100 Nitrosomonas sp. Is79A3 10935447 YP_004696470.1 CDS Nit79A3_3342 NC_015731.1 3553121 3553492 R KEGG: nit:NAL212_2978 transcriptional regulator, TraR/DksA family; TraR/DksA family transcriptional regulator complement(3553121..3553492) Nitrosomonas sp. Is79A3 10935448 YP_004696471.1 CDS Nit79A3_3343 NC_015731.1 3553596 3554129 R PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: nit:NAL212_2977 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase complement(3553596..3554129) Nitrosomonas sp. Is79A3 10935449 YP_004696472.1 CDS Nit79A3_3344 NC_015731.1 3554145 3555377 R PFAM: Major facilitator superfamily MFS-1; KEGG: nmu:Nmul_A0026 major facilitator transporter; major facilitator superfamily protein complement(3554145..3555377) Nitrosomonas sp. Is79A3 10935450 YP_004696473.1 CDS Nit79A3_3345 NC_015731.1 3555688 3556395 R PFAM: Restriction endonuclease, type IV-like, Mrr; KEGG: vfm:VFMJ11_A0652 restriction endonuclease; restriction endonuclease complement(3555688..3556395) Nitrosomonas sp. Is79A3 10935452 YP_004696474.1 CDS Nit79A3_3347 NC_015731.1 3556991 3558076 R TIGRFAM: Addiction module antidote protein, HigA; PFAM: Helix-turn-helix type 3; Protein of unknown function DUF955; KEGG: cyt:cce_1126 hypothetical protein; SMART: Helix-turn-helix type 3; XRE family transcriptional regulator complement(3556991..3558076) Nitrosomonas sp. Is79A3 10935454 YP_004696475.1 CDS Nit79A3_3348 NC_015731.1 3558066 3558371 R PFAM: Plasmid maintenance system killer; KEGG: cki:Calkr_0087 hypothetical protein; plasmid maintenance system killer complement(3558066..3558371) Nitrosomonas sp. Is79A3 10935455 YP_004696476.1 CDS Nit79A3_3350 NC_015731.1 3559631 3560248 R KEGG: rsc:RCFBP_11248 hypothetical protein; hypothetical protein complement(3559631..3560248) Nitrosomonas sp. Is79A3 10935457 YP_004696477.1 CDS Nit79A3_3351 NC_015731.1 3560320 3561903 R KEGG: nit:NAL212_0062 transposase IS66; manually curated; PFAM: Transposase, IS66; transposase IS66 complement(3560320..3561903) Nitrosomonas sp. Is79A3 10935458 YP_004696478.1 CDS Nit79A3_3352 NC_015731.1 3561953 3562300 R KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein complement(3561953..3562300) Nitrosomonas sp. Is79A3 10935459 YP_004696479.1 CDS Nit79A3_3353 NC_015731.1 3562291 3562581 R KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein complement(3562291..3562581) Nitrosomonas sp. Is79A3 10935460 YP_004696480.1 CDS Nit79A3_3354 NC_015731.1 3562630 3564465 R PFAM: Protein of unknown function DUF262; Protein of unknown function DUF1524 RloF; KEGG: dol:Dole_2238 hypothetical protein; hypothetical protein complement(3562630..3564465) Nitrosomonas sp. Is79A3 10935461 YP_004696481.1 CDS Nit79A3_3356 NC_015731.1 3567674 3568096 R TIGRFAM: Protein of unknown function DUF132; PFAM: PilT protein, N-terminal; KEGG: aca:ACP_3427 conserved hypothetical protein TIGR00305; SMART: Nucleotide binding protein, PINc; hypothetical protein complement(3567674..3568096) Nitrosomonas sp. Is79A3 10935463 YP_004696482.1 CDS Nit79A3_3357 NC_015731.1 3568083 3568358 R TIGRFAM: Prevent-host-death protein; KEGG: aca:ACP_3428 prevent-host-death family protein; prevent-host-death family protein complement(3568083..3568358) Nitrosomonas sp. Is79A3 10935464 YP_004696483.1 CDS Nit79A3_3358 NC_015731.1 3568408 3569799 R PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: mjl:Mjls_2226 restriction modification system DNA specificity subunit; restriction modification system DNA specificity domain-containing protein complement(3568408..3569799) Nitrosomonas sp. Is79A3 10935465 YP_004696484.1 CDS Nit79A3_3359 NC_015731.1 3569796 3570218 R KEGG: glo:Glov_2071 PilT protein domain protein; twitching motility protein PilT complement(3569796..3570218) Nitrosomonas sp. Is79A3 10935466 YP_004696485.1 CDS Nit79A3_3360 NC_015731.1 3570208 3570489 R hypothetical protein complement(3570208..3570489) Nitrosomonas sp. Is79A3 10935467 YP_004696486.1 CDS Nit79A3_3362 NC_015731.1 3572690 3573022 D KEGG: nit:NAL212_0067 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; histone family protein DNA-binding protein 3572690..3573022 Nitrosomonas sp. Is79A3 10935469 YP_004696487.1 CDS Nit79A3_3364 NC_015731.1 3573578 3573805 R hypothetical protein complement(3573578..3573805) Nitrosomonas sp. Is79A3 10935471 YP_004696488.1 CDS Nit79A3_3365 NC_015731.1 3573802 3574521 R PFAM: Phage antirepressor protein; Phage regulatory protein, Rha-like; KEGG: epy:EpC_20720 pahge-related protein; phage antirepressor protein complement(3573802..3574521) Nitrosomonas sp. Is79A3 10935472 YP_004696489.1 CDS Nit79A3_3366 NC_015731.1 3574723 3575271 R KEGG: xcv:XCV2222 hypothetical protein; hypothetical protein complement(3574723..3575271) Nitrosomonas sp. Is79A3 10935473 YP_004696490.1 CDS Nit79A3_3367 NC_015731.1 3575349 3575579 R KEGG: sbn:Sbal195_3111 hypothetical protein; hypothetical protein complement(3575349..3575579) Nitrosomonas sp. Is79A3 10935474 YP_004696491.1 CDS Nit79A3_3368 NC_015731.1 3575724 3576425 R KEGG: nmu:Nmul_A2183 hypothetical protein; hypothetical protein complement(3575724..3576425) Nitrosomonas sp. Is79A3 10935475 YP_004696492.1 CDS Nit79A3_3369 NC_015731.1 3576437 3577624 R PFAM: Integrase, catalytic core, phage; KEGG: rpf:Rpic12D_1016 integrase; integrase complement(3576437..3577624) Nitrosomonas sp. Is79A3 10935476 YP_004696493.1 CDS Nit79A3_3370 NC_015731.1 3578260 3578826 D KEGG: app:CAP2UW1_2168 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 3578260..3578826 Nitrosomonas sp. Is79A3 10935477 YP_004696494.1 CDS Nit79A3_3371 NC_015731.1 3579162 3579545 R KEGG: nit:NAL212_2339 hypothetical protein; hypothetical protein complement(3579162..3579545) Nitrosomonas sp. Is79A3 10935478 YP_004696495.1 CDS Nit79A3_3372 NC_015731.1 3579718 3582081 D KEGG: nit:NAL212_0226 type I site-specific deoxyribonuclease; PFAM: Restriction endonuclease, type I, EcoEI, R subunit/Type III, Res subunit, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; EcoEI R domain-containing protein 3579718..3582081 Nitrosomonas sp. Is79A3 10935479 YP_004696496.1 CDS Nit79A3_3373 NC_015731.1 3582120 3583589 D PFAM: DNA methylase, adenine-specific; KEGG: nit:NAL212_0225 site-specific DNA-methyltransferase (adenine-specific); N-6 DNA methylase 3582120..3583589 Nitrosomonas sp. Is79A3 10935480 YP_004696497.1 CDS Nit79A3_3374 NC_015731.1 3583830 3585029 D SMART: ATPase, AAA+ type, core; KEGG: nit:NAL212_0224 AAA ATPase; ATPase AAA 3583830..3585029 Nitrosomonas sp. Is79A3 10935481 YP_004696498.1 CDS Nit79A3_3375 NC_015731.1 3585026 3586795 D PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: ecl:EcolC_3719 restriction modification system DNA specificity subunit; restriction modification system DNA specificity domain-containing protein 3585026..3586795 Nitrosomonas sp. Is79A3 10935482 YP_004696499.1 CDS Nit79A3_3376 NC_015731.1 3586942 3588423 D KEGG: nit:NAL212_2273 hypothetical protein; HAMAP: UPF0061 protein ydiU; PFAM: Uncharacterised protein family UPF0061; hypothetical protein 3586942..3588423 Nitrosomonas sp. Is79A3 10935483 YP_004696500.1 CDS Nit79A3_3377 NC_015731.1 3588525 3589907 R PFAM: NAD(P) transhydrogenase, beta subunit; KEGG: nit:NAL212_0651 NAD(P)(+) transhydrogenase (AB-specific); NAD(P) transhydrogenase subunit beta complement(3588525..3589907) Nitrosomonas sp. Is79A3 10935484 YP_004696501.1 CDS Nit79A3_3378 NC_015731.1 3589908 3590216 R KEGG: nit:NAL212_0650 transmembrane NAD(P) transhydrogenase (alpha subunit part 2); transmembrane NAD(P) transhydrogenase (subunit alpha part 2) complement(3589908..3590216) Nitrosomonas sp. Is79A3 10935485 YP_004696502.1 CDS Nit79A3_3379 NC_015731.1 3590296 3591423 R PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; KEGG: nit:NAL212_0649 NAD(P)(+) transhydrogenase (AB-specific); alanine dehydrogenase complement(3590296..3591423) Nitrosomonas sp. Is79A3 10935486 YP_004696503.1 CDS Nit79A3_3380 NC_015731.1 3591741 3592127 R KEGG: nit:NAL212_0648 Hpt domain-containing protein; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: Signal transduction histidine kinase, phosphotransfer (Hpt) region; Hpt domain-containing protein complement(3591741..3592127) Nitrosomonas sp. Is79A3 10935487 YP_004696504.1 CDS Nit79A3_3381 NC_015731.1 3592342 3595887 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nit:NAL212_0647 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3592342..3595887) Nitrosomonas sp. Is79A3 10935488 YP_004696505.1 CDS Nit79A3_3382 NC_015731.1 3596000 3597211 R KEGG: hch:HCH_00967 FOG EAL domain-containing protein; PFAM: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region; SMART: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate phosphodiesterase complement(3596000..3597211) Nitrosomonas sp. Is79A3 10935489 YP_004696506.1 CDS Nit79A3_3383 NC_015731.1 3597303 3597743 R KEGG: nit:NAL212_0646 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein complement(3597303..3597743) Nitrosomonas sp. Is79A3 10935490 YP_004696507.1 CDS Nit79A3_3384 NC_015731.1 3597819 3599096 R TIGRFAM: Sulphate adenylyltransferase, large subunit; Small GTP-binding protein; HAMAP: Sulfate adenylyltransferase subunit 1; KEGG: nmu:Nmul_A1149 sulfate adenylyltransferase, large subunit; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Sulfate adenylyltransferase subunit 1 complement(3597819..3599096) Nitrosomonas sp. Is79A3 10935491 YP_004696508.1 CDS Nit79A3_3385 NC_015731.1 3599228 3600133 R KEGG: nmu:Nmul_A1148 sulfate adenylyltransferase subunit 2; TIGRFAM: Sulphate adenylyltransferase, small subunit; PFAM: Phosphoadenosine phosphosulphate reductase; sulfate adenylyltransferase, small subunit complement(3599228..3600133) Nitrosomonas sp. Is79A3 10935492 YP_004696509.1 CDS Nit79A3_3386 NC_015731.1 3600219 3600917 R KEGG: nit:NAL212_0644 adenylylsulfate reductase, thioredoxin dependent; TIGRFAM: Adenylylsulphate reductase, thioredoxin dependent; Phosphoadenosine phosphosulphate reductase CysH-type; PFAM: Phosphoadenosine phosphosulphate reductase; adenylylsulfate reductase, thioredoxin dependent complement(3600219..3600917) Nitrosomonas sp. Is79A3 10935493 YP_004696510.1 CDS Nit79A3_3387 NC_015731.1 3600910 3601443 R PFAM: Uncharacterised conserved protein UCP030820; KEGG: nit:NAL212_0643 hypothetical protein; hypothetical protein complement(3600910..3601443) Nitrosomonas sp. Is79A3 10935494 YP_004696511.1 CDS Nit79A3_3388 NC_015731.1 3601450 3603192 R PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; KEGG: nit:NAL212_0642 ferredoxin--nitrite reductase; nitrite and sulfite reductase 4Fe-4S region complement(3601450..3603192) Nitrosomonas sp. Is79A3 10935495 YP_004696512.1 CDS Nit79A3_3389 NC_015731.1 3603279 3603509 R KEGG: nit:NAL212_0641 hypothetical protein; hypothetical protein complement(3603279..3603509) Nitrosomonas sp. Is79A3 10935496 YP_004696513.1 CDS Nit79A3_3390 NC_015731.1 3604073 3605071 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nit:NAL212_0640 transcriptional regulator, LysR family; LysR family transcriptional regulator 3604073..3605071 Nitrosomonas sp. Is79A3 10935497 YP_004696514.1 CDS Nit79A3_3391 NC_015731.1 3605068 3605619 D KEGG: nit:NAL212_0639 hypothetical protein; hypothetical protein 3605068..3605619 Nitrosomonas sp. Is79A3 10935498 YP_004696515.1 CDS Nit79A3_3392 NC_015731.1 3605690 3606118 D KEGG: nit:NAL212_0638 hypothetical protein; hypothetical protein 3605690..3606118 Nitrosomonas sp. Is79A3 10935499 YP_004696516.1 CDS Nit79A3_3393 NC_015731.1 3606261 3607133 D PFAM: Mitochondrial inner membrane translocase complex, subunit Tim44-related; KEGG: nit:NAL212_0637 import inner membrane translocase subunit Tim44; import inner membrane translocase subunit Tim44 3606261..3607133 Nitrosomonas sp. Is79A3 10935500 YP_004696517.1 CDS Nit79A3_3394 NC_015731.1 3607424 3607918 D PFAM: Protein of unknown function DUF2165, transmembrane; KEGG: nit:NAL212_0636 hypothetical protein; hypothetical protein 3607424..3607918 Nitrosomonas sp. Is79A3 10935501 YP_004696518.1 CDS Nit79A3_3395 NC_015731.1 3608060 3608467 R PFAM: Protein of unknown function DUF336; KEGG: nit:NAL212_0634 hypothetical protein; hypothetical protein complement(3608060..3608467) Nitrosomonas sp. Is79A3 10935502 YP_004696519.1 CDS Nit79A3_3396 NC_015731.1 3608604 3609557 R manually curated; KEGG: nit:NAL212_0633 serine O-acetyltransferase; serine O-acetyltransferase complement(3608604..3609557) Nitrosomonas sp. Is79A3 10935503 YP_004696520.1 CDS Nit79A3_3397 NC_015731.1 3609554 3610534 R KEGG: nit:NAL212_0632 cysteine synthase; TIGRFAM: Cysteine synthase A; Cysteine synthase K/M; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; cysteine synthase A complement(3609554..3610534) Nitrosomonas sp. Is79A3 10935504 YP_004696521.1 CDS Nit79A3_3398 NC_015731.1 3611114 3611902 D KEGG: cce:Ccel_1543 cellulosome anchoring protein cohesin region; TIGRFAM: PEP-CTERM anchor; PFAM: Thrombospondin, C-terminal; PEP-CTERM bacterial; PEP motif anchor domain-containing protein 3611114..3611902 Nitrosomonas sp. Is79A3 10935505 YP_004696522.1 CDS Nit79A3_3399 NC_015731.1 3612267 3612926 D PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal; KEGG: bge:BC1002_4939 peroxidase; alkyl hydroperoxide reductase 3612267..3612926 Nitrosomonas sp. Is79A3 10935506 YP_004696523.1 CDS Nit79A3_3400 NC_015731.1 3612981 3613367 R hypothetical protein complement(3612981..3613367) Nitrosomonas sp. Is79A3 10935507 YP_004696524.1 CDS Nit79A3_3401 NC_015731.1 3613784 3614548 D PFAM: Protein of unknown function DUF980; KEGG: nmu:Nmul_A1873 hypothetical protein; hypothetical protein 3613784..3614548 Nitrosomonas sp. Is79A3 10935508 YP_004696525.1 CDS Nit79A3_3402 NC_015731.1 3614563 3615225 R KEGG: bcd:BARCL_0364 hypothetical protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase complement(3614563..3615225) Nitrosomonas sp. Is79A3 10935509 YP_004696526.1 CDS Nit79A3_3403 NC_015731.1 3615268 3616542 R hypothetical protein complement(3615268..3616542) Nitrosomonas sp. Is79A3 10935510 YP_004696527.1 CDS Nit79A3_3404 NC_015731.1 3616820 3617344 R PFAM: Phosphoglycerate mutase; KEGG: rca:Rcas_2324 phosphoglycerate mutase; Phosphoglycerate mutase complement(3616820..3617344) Nitrosomonas sp. Is79A3 10935511 YP_004696528.1 CDS Nit79A3_3405 NC_015731.1 3617554 3617802 D TIGRFAM: Prevent-host-death protein; KEGG: ppd:Ppro_2533 prevent-host-death family protein; prevent-host-death family protein 3617554..3617802 Nitrosomonas sp. Is79A3 10935512 YP_004696529.1 CDS Nit79A3_3406 NC_015731.1 3617799 3618083 D KEGG: geb:GM18_1754 hypothetical protein; hypothetical protein 3617799..3618083 Nitrosomonas sp. Is79A3 10935513 YP_004696530.1 CDS Nit79A3_3407 NC_015731.1 3618064 3618342 D hypothetical protein 3618064..3618342 Nitrosomonas sp. Is79A3 10935514 YP_004696531.1 CDS Nit79A3_3408 NC_015731.1 3618277 3618540 R TIGRFAM: Prevent-host-death protein; KEGG: mag:amb1707 antitoxin of toxin-antitoxin stability system; prevent-host-death family protein complement(3618277..3618540) Nitrosomonas sp. Is79A3 10935515 YP_004696532.1 CDS Nit79A3_3409 NC_015731.1 3618708 3618983 D KEGG: lch:Lcho_4295 hypothetical protein; hypothetical protein 3618708..3618983 Nitrosomonas sp. Is79A3 10935516 YP_004696533.1 CDS Nit79A3_3410 NC_015731.1 3619000 3619155 D hypothetical protein 3619000..3619155 Nitrosomonas sp. Is79A3 10935517 YP_004696534.1 CDS Nit79A3_3411 NC_015731.1 3619221 3619829 R hypothetical protein complement(3619221..3619829) Nitrosomonas sp. Is79A3 10935518 YP_004696535.1 CDS Nit79A3_3412 NC_015731.1 3619973 3621199 R PFAM: NnrS; KEGG: nit:NAL212_0293 NnrS family protein; NnrS family protein complement(3619973..3621199) Nitrosomonas sp. Is79A3 10935519 YP_004696536.1 CDS Nit79A3_3413 NC_015731.1 3621472 3622329 D KEGG: nit:NAL212_0291 PHP domain-containing protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; PHP domain-containing protein 3621472..3622329 Nitrosomonas sp. Is79A3 10935520 YP_004696537.1 CDS Nit79A3_3414 NC_015731.1 3622381 3623013 D KEGG: nit:NAL212_0290 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; Sua5/YciO/YrdC/YwlC family protein 3622381..3623013 Nitrosomonas sp. Is79A3 10935521 YP_004696538.1 CDS Nit79A3_3415 NC_015731.1 3623006 3623671 D PFAM: Peptidase M50; KEGG: nit:NAL212_0289 peptidase M50; peptidase M50 3623006..3623671 Nitrosomonas sp. Is79A3 10935522 YP_004696539.1 CDS Nit79A3_3416 NC_015731.1 3623698 3624900 D KEGG: nit:NAL212_0288 tryptophanyl-tRNA synthetase; TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; PFAM: Aminoacyl-tRNA synthetase, class Ib; tryptophanyl-tRNA synthetase 3623698..3624900 Nitrosomonas sp. Is79A3 10935523 YP_004696540.1 CDS Nit79A3_3417 NC_015731.1 3624959 3625771 D KEGG: nit:NAL212_0287 chromosome segregation and condensation protein ScpA; HAMAP: Segregation and condensation protein A; PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; Segregation and condensation protein A 3624959..3625771 Nitrosomonas sp. Is79A3 10935524 YP_004696541.1 CDS Nit79A3_3418 NC_015731.1 3625737 3626366 D KEGG: nit:NAL212_0286 chromosome segregation and condensation protein, ScpB; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote; chromosome segregation and condensation protein ScpB 3625737..3626366 Nitrosomonas sp. Is79A3 10935525 YP_004696542.1 CDS Nit79A3_3419 NC_015731.1 3626360 3627181 R PFAM: Inositol monophosphatase; KEGG: nit:NAL212_0282 inositol-phosphate phosphatase; inositol monophosphatase complement(3626360..3627181) Nitrosomonas sp. Is79A3 10935526 YP_004696543.1 CDS Nit79A3_3420 NC_015731.1 3627404 3627958 R KEGG: nit:NAL212_1338 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein complement(3627404..3627958) Nitrosomonas sp. Is79A3 10935527 YP_004696544.1 CDS Nit79A3_3421 NC_015731.1 3628694 3629374 D KEGG: nit:NAL212_0281 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; LuxR family transcriptional regulator 3628694..3629374 Nitrosomonas sp. Is79A3 10935528 YP_004696545.1 CDS Nit79A3_3422 NC_015731.1 3629614 3630339 D KEGG: nit:NAL212_0281 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; LuxR family transcriptional regulator 3629614..3630339 Nitrosomonas sp. Is79A3 10935529 YP_004696546.1 CDS Nit79A3_3423 NC_015731.1 3630575 3631597 D PFAM: Multicopper oxidase, type 3; KEGG: nit:NAL212_0280 multicopper oxidase type 3; multicopper oxidase type 3 3630575..3631597 Nitrosomonas sp. Is79A3 10935530 YP_004696547.1 CDS Nit79A3_3424 NC_015731.1 3631587 3634388 D PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; KEGG: nit:NAL212_0279 multicopper oxidase type 3; multicopper oxidase type 3 3631587..3634388 Nitrosomonas sp. Is79A3 10935531 YP_004696548.1 CDS Nit79A3_3425 NC_015731.1 3634650 3635765 D PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein 3634650..3635765 Nitrosomonas sp. Is79A3 10935532 YP_004696549.1 CDS Nit79A3_3427 NC_015731.1 3637471 3638388 R KEGG: nit:NAL212_2959 hypothetical protein; hypothetical protein complement(3637471..3638388) Nitrosomonas sp. Is79A3 10935534 YP_004696550.1 CDS Nit79A3_3428 NC_015731.1 3638533 3639231 D TIGRFAM: Leucyl/phenylalanyl-tRNA-protein transferase; HAMAP: Leucyl/phenylalanyl-tRNA-protein transferase; KEGG: nit:NAL212_0205 leucyl/phenylalanyl-tRNA/protein transferase; PFAM: Leucyl/phenylalanyl-tRNA-protein transferase; Leucyl/phenylalanyl-tRNA--protein transferase 3638533..3639231 Nitrosomonas sp. Is79A3 10935535 YP_004696551.1 CDS Nit79A3_3429 NC_015731.1 3639244 3639951 D KEGG: nit:NAL212_0204 arginyl-tRNA--protein transferase; HAMAP: Arginine-tRNA-protein transferase, predicted, prokaryotic; PFAM: Arginine-tRNA-protein transferase, C-terminal; Arginine-tRNA-protein transferase, N-terminal; arginyl-tRNA-protein transferase 3639244..3639951 Nitrosomonas sp. Is79A3 10935536 YP_004696552.1 CDS Nit79A3_3430 NC_015731.1 3639992 3641032 D TIGRFAM: Dihydroorotate dehydrogenase, class 2; HAMAP: Dihydroorotate dehydrogenase; KEGG: nit:NAL212_0203 dihydroorotate dehydrogenase; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; Dihydroorotate dehydrogenase 3639992..3641032 Nitrosomonas sp. Is79A3 10935537 YP_004696553.1 CDS Nit79A3_3431 NC_015731.1 3641035 3641718 D KEGG: nit:NAL212_0202 electron transport complex, RnfABCDGE type, B subunit; TIGRFAM: Electron transport complex, RnfB; PFAM: Fe-S cluster; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; RnfABCDGE type electron transport complex subunit B 3641035..3641718 Nitrosomonas sp. Is79A3 10935538 YP_004696554.1 CDS Nit79A3_3432 NC_015731.1 3641715 3642347 D TIGRFAM: Endonuclease III/Nth; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; KEGG: nit:NAL212_0201 endonuclease III; SMART: HhH-GPD domain; Helix-hairpin-helix DNA-binding motif, class 1; Endonuclease III-like, iron-sulphur cluster loop motif; endonuclease III 3641715..3642347 Nitrosomonas sp. Is79A3 10935539 YP_004696555.1 CDS Nit79A3_3433 NC_015731.1 3642361 3642798 D PFAM: Protein of unknown function DUF1841; KEGG: nit:NAL212_0200 hypothetical protein; hypothetical protein 3642361..3642798 Nitrosomonas sp. Is79A3 10935540 YP_004696556.1 CDS Nit79A3_3434 NC_015731.1 3642873 3643202 R PFAM: Cytochrome c, class I; KEGG: nit:NAL212_0199 cytochrome c class I; cytochrome c class I complement(3642873..3643202) Nitrosomonas sp. Is79A3 10935541 YP_004696557.1 CDS Nit79A3_3435 NC_015731.1 3643230 3643556 R KEGG: nit:NAL212_0198 cytochrome c class I; cytochrome c class I complement(3643230..3643556) Nitrosomonas sp. Is79A3 10935542 YP_004696558.1 CDS Nit79A3_3436 NC_015731.1 3643664 3645589 R KEGG: nit:NAL212_0197 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter complement(3643664..3645589) Nitrosomonas sp. Is79A3 10935543 YP_004696559.1 CDS Nit79A3_3437 NC_015731.1 3645865 3646290 R PFAM: Heat shock protein Hsp20; KEGG: nit:NAL212_0196 heat shock protein HSP20; heat shock protein Hsp20 complement(3645865..3646290) Nitrosomonas sp. Is79A3 10935544 YP_004696560.1 CDS Nit79A3_3438 NC_015731.1 3646489 3647136 R KEGG: nit:NAL212_0195 hypothetical protein; hypothetical protein complement(3646489..3647136) Nitrosomonas sp. Is79A3 10935545 YP_004696561.1 CDS Nit79A3_3439 NC_015731.1 3647217 3647363 D hypothetical protein 3647217..3647363 Nitrosomonas sp. Is79A3 10935546 YP_004696562.1 CDS Nit79A3_3440 NC_015731.1 3647378 3647611 R KEGG: nwa:Nwat_2429 hypothetical protein; hypothetical protein complement(3647378..3647611) Nitrosomonas sp. Is79A3 10935547 YP_004696563.1 CDS Nit79A3_3441 NC_015731.1 3647616 3648029 R KEGG: yps:YPTB1833 hypothetical protein; hypothetical protein complement(3647616..3648029) Nitrosomonas sp. Is79A3 10935548 YP_004696564.1 CDS Nit79A3_3442 NC_015731.1 3648194 3648895 R PFAM: Protein of unknown function DUF45; KEGG: nit:NAL212_3099 hypothetical protein; hypothetical protein complement(3648194..3648895) Nitrosomonas sp. Is79A3 10935549 YP_004696565.1 CDS Nit79A3_3443 NC_015731.1 3648898 3649638 R KEGG: nit:NAL212_3100 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(3648898..3649638) Nitrosomonas sp. Is79A3 10935550 YP_004696566.1 CDS Nit79A3_3444 NC_015731.1 3649635 3650174 R KEGG: nit:NAL212_3101 histidinol-phosphate phosphatase; TIGRFAM: Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; PFAM: Haloacid dehalogenase-like hydrolase; histidinol-phosphate phosphatase complement(3649635..3650174) Nitrosomonas sp. Is79A3 10935551 YP_004696567.1 CDS Nit79A3_3445 NC_015731.1 3650176 3652365 R TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit; HAMAP: Glycyl-tRNA synthetase beta subunit; KEGG: nit:NAL212_3102 glycyl-tRNA synthetase, beta subunit; Glycyl-tRNA synthetase subunit beta complement(3650176..3652365) Nitrosomonas sp. Is79A3 10935552 YP_004696568.1 CDS Nit79A3_3446 NC_015731.1 3652362 3653285 R TIGRFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Glycyl-tRNA synthetase, class IIc, alpha subunit; KEGG: nit:NAL212_3103 glycyl-tRNA synthetase, alpha subunit; PFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; Glycyl-tRNA synthetase subunit alpha complement(3652362..3653285) Nitrosomonas sp. Is79A3 10935553 YP_004696569.1 CDS Nit79A3_3447 NC_015731.1 3653332 3654843 R TIGRFAM: Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; KEGG: nit:NAL212_3104 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Apolipoprotein N-acyltransferase complement(3653332..3654843) Nitrosomonas sp. Is79A3 10935554 YP_004696570.1 CDS Nit79A3_3448 NC_015731.1 3655227 3656963 D PFAM: Tetratricopeptide TPR-1; KEGG: nit:NAL212_3105 hypothetical protein; hypothetical protein 3655227..3656963 Nitrosomonas sp. Is79A3 10935555 YP_004696571.1 CDS Nit79A3_3449 NC_015731.1 3657072 3657821 D TIGRFAM: Septum formation inhibitor MinC; HAMAP: Septum formation inhibitor MinC; KEGG: nit:NAL212_3106 septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC, C-terminal; Septum formation inhibitor MinC, N-terminal; septum site-determining protein minC 3657072..3657821 Nitrosomonas sp. Is79A3 10935556 YP_004696572.1 CDS Nit79A3_3450 NC_015731.1 3657846 3658658 D KEGG: nit:NAL212_3107 septum site-determining protein MinD; TIGRFAM: Septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; septum site-determining protein MinD 3657846..3658658 Nitrosomonas sp. Is79A3 10935557 YP_004696573.1 CDS Nit79A3_3451 NC_015731.1 3658655 3658933 D TIGRFAM: Septum formation topological specificity factor MinE; HAMAP: Septum formation topological specificity factor MinE; KEGG: nit:NAL212_3108 cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; Cell division topological specificity factor 3658655..3658933 Nitrosomonas sp. Is79A3 10935558 YP_004696574.1 CDS Nit79A3_3452 NC_015731.1 3658956 3659660 D TIGRFAM: Outer membrane lipoprotein LolB; HAMAP: Outer-membrane lipoprotein lolB; KEGG: nit:NAL212_3109 outer-membrane lipoprotein LolB; PFAM: Outer membrane lipoprotein LolB; Outer-membrane lipoprotein lolB 3658956..3659660 Nitrosomonas sp. Is79A3 10935559 YP_004696575.1 CDS Nit79A3_3453 NC_015731.1 3659707 3660546 D TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: nit:NAL212_3110 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 3659707..3660546 Nitrosomonas sp. Is79A3 10935560 YP_004696576.1 CDS Nit79A3_3454 NC_015731.1 3660741 3661691 D KEGG: nit:NAL212_3111 ribose-phosphate pyrophosphokinase; TIGRFAM: Phosphoribosyl pyrophosphokinase; PFAM: Phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 3660741..3661691 Nitrosomonas sp. Is79A3 10935562 YP_004696577.1 CDS Nit79A3_3455 NC_015731.1 3661757 3662380 D TIGRFAM: Ribosomal protein L25; HAMAP: 50S ribosomal protein L25; Ribosomal protein L25; KEGG: nit:NAL212_3112 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25, N-terminal; 50S ribosomal protein L25 3661757..3662380 Nitrosomonas sp. Is79A3 10935563 YP_004696578.1 CDS Nit79A3_3456 NC_015731.1 3662502 3663071 D TIGRFAM: Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; KEGG: nit:NAL212_3113 peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 3662502..3663071 Nitrosomonas sp. Is79A3 10935564 YP_004696579.1 CDS Nit79A3_3457 NC_015731.1 3663131 3664222 D KEGG: nit:NAL212_3114 GTP-binding protein YchF; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Protein of unknown function DUF933; GTP-binding protein, HSR1-related; GTP-binding protein YchF 3663131..3664222 Nitrosomonas sp. Is79A3 10935565 YP_004696580.1 CDS Nit79A3_3458 NC_015731.1 3664325 3665440 D PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: nit:NAL212_3115 filamentation induced by cAMP protein Fic; Fic family protein 3664325..3665440 Nitrosomonas sp. Is79A3 10935566 YP_004696581.1 CDS Nit79A3_3459 NC_015731.1 3665517 3666164 D KEGG: ajs:Ajs_0195 type III restriction system methylase; type III restriction system methylase 3665517..3666164 Nitrosomonas sp. Is79A3 10935567 YP_004696582.1 CDS Nit79A3_3460 NC_015731.1 3666161 3667810 D KEGG: ajs:Ajs_0197 Eco57I restriction endonuclease; Eco57I restriction endonuclease 3666161..3667810 Nitrosomonas sp. Is79A3 10935568 YP_004696583.1 CDS Nit79A3_3461 NC_015731.1 3667803 3670340 D KEGG: cpb:Cphamn1_0745 hypothetical protein; hypothetical protein 3667803..3670340 Nitrosomonas sp. Is79A3 10935569 YP_004696584.1 CDS Nit79A3_3463 NC_015731.1 3671589 3671888 R KEGG: nla:NLA_6641 hypothetical protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal; excinuclease ABC subunit C complement(3671589..3671888) Nitrosomonas sp. Is79A3 10935571 YP_004696585.1 CDS Nit79A3_3464 NC_015731.1 3672026 3674929 R KEGG: nit:NAL212_3117 RNA polymerase recycling-like protein; PFAM: SNF2-related; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SNF2-like protein complement(3672026..3674929) Nitrosomonas sp. Is79A3 10935572 YP_004696586.1 CDS Nit79A3_3465 NC_015731.1 3675187 3675939 R PFAM: Protein of unknown function DUF2490; KEGG: nit:NAL212_3118 hypothetical protein; hypothetical protein complement(3675187..3675939) Nitrosomonas sp. Is79A3 10935573 YP_004696587.1 CDS Nit79A3_3466 NC_015731.1 3676628 3676936 D PFAM: Cytochrome c, class I; KEGG: nit:NAL212_3121 cytochrome c, class I; cytochrome c class I 3676628..3676936 Nitrosomonas sp. Is79A3 10935574 YP_004696588.1 CDS Nit79A3_3467 NC_015731.1 3676982 3678391 R TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN; PFAM: HemN, C-terminal; Radical SAM; KEGG: nit:NAL212_3122 coproporphyrinogen dehydrogenase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase complement(3676982..3678391) Nitrosomonas sp. Is79A3 10935575 YP_004696589.1 CDS Nit79A3_3468 NC_015731.1 3678632 3679384 D KEGG: nit:NAL212_3123 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 3678632..3679384 Nitrosomonas sp. Is79A3 10935576 YP_004696590.1 CDS Nit79A3_3469 NC_015731.1 3679675 3680394 D KEGG: nit:NAL212_3124 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2; 30S ribosomal protein S2 3679675..3680394 Nitrosomonas sp. Is79A3 10935577 YP_004696591.1 CDS Nit79A3_3470 NC_015731.1 3680566 3681450 D TIGRFAM: Translation elongation factor EFTs/EF1B; HAMAP: Elongation factor Ts; KEGG: nit:NAL212_3125 translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; Elongation factor Ts 3680566..3681450 Nitrosomonas sp. Is79A3 10935578 YP_004696592.1 CDS Nit79A3_3471 NC_015731.1 3681481 3682197 D KEGG: nit:NAL212_3126 uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; PFAM: Aspartate/glutamate/uridylate kinase; uridylate kinase 3681481..3682197 Nitrosomonas sp. Is79A3 10935579 YP_004696593.1 CDS Nit79A3_3472 NC_015731.1 3682247 3682804 D TIGRFAM: Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; KEGG: nit:NAL212_3127 ribosome recycling factor; PFAM: Ribosome recycling factor; Ribosome-recycling factor 3682247..3682804 Nitrosomonas sp. Is79A3 10935580 YP_004696594.1 CDS Nit79A3_3473 NC_015731.1 3682806 3683573 D TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Undecaprenyl pyrophosphate synthase; KEGG: nit:NAL212_3128 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; UDP pyrophosphate synthase 3682806..3683573 Nitrosomonas sp. Is79A3 10935581 YP_004696595.1 CDS Nit79A3_3474 NC_015731.1 3683588 3684409 D PFAM: Phosphatidate cytidylyltransferase; KEGG: nit:NAL212_3129 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 3683588..3684409 Nitrosomonas sp. Is79A3 10935582 YP_004696596.1 CDS Nit79A3_3475 NC_015731.1 3684409 3685596 D TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: nit:NAL212_3130 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3684409..3685596 Nitrosomonas sp. Is79A3 10935583 YP_004696597.1 CDS Nit79A3_3476 NC_015731.1 3685708 3687075 D KEGG: nit:NAL212_3131 membrane-associated zinc metalloprotease; TIGRFAM: Peptidase M50, membrane-associated zinc metallopeptidase; PFAM: Peptidase M50; PDZ/DHR/GLGF; zinc metalloprotease 3685708..3687075 Nitrosomonas sp. Is79A3 10935584 YP_004696598.1 CDS Nit79A3_3477 NC_015731.1 3687079 3689352 D KEGG: nit:NAL212_3132 outer membrane protein assembly complex, YaeT protein; TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; outer membrane protein assembly complex, YaeT protein 3687079..3689352 Nitrosomonas sp. Is79A3 10935585 YP_004696599.1 CDS Nit79A3_3478 NC_015731.1 3689383 3689910 D KEGG: nit:NAL212_3133 outer membrane chaperone Skp (OmpH); manually curated; PFAM: Outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 3689383..3689910 Nitrosomonas sp. Is79A3 10935586 YP_004696600.1 CDS Nit79A3_3479 NC_015731.1 3689976 3690419 D TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; HAMAP: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; KEGG: nit:NAL212_3134 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; (3R)-hydroxymyristoyl-ACP dehydratase 3689976..3690419 Nitrosomonas sp. Is79A3 10935587 YP_004696601.1 CDS Nit79A3_3480 NC_015731.1 3690621 3691229 D PFAM: Ribonuclease HII/HIII; KEGG: nit:NAL212_3135 ribonuclease H; ribonuclease HII/HIII 3690621..3691229 Nitrosomonas sp. Is79A3 10935588 YP_004696602.1 CDS Nit79A3_3481 NC_015731.1 3691389 3691868 D KEGG: nit:NAL212_3136 peptidylprolyl isomerase FKBP-type; FKBP-type peptidylprolyl isomerase 3691389..3691868 Nitrosomonas sp. Is79A3 10935589 YP_004696603.1 CDS Nit79A3_3482 NC_015731.1 3691899 3694499 R SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; TIGRFAM: DNA mismatch repair protein MutS, type 1; KEGG: nit:NAL212_3137 DNA mismatch repair protein MutS; HAMAP: DNA mismatch repair protein MutS, type 1; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp; DNA mismatch repair protein mutS complement(3691899..3694499) Nitrosomonas sp. Is79A3 10935590 YP_004696604.1 CDS Nit79A3_3483 NC_015731.1 3694955 3696061 R PFAM: Glutaredoxin; KEGG: tmz:Tmz1t_0130 glutaredoxin; glutaredoxin complement(3694955..3696061) Nitrosomonas sp. Is79A3 10935591 YP_004696605.1 CDS Nit79A3_3485 NC_015731.1 3696558 3697067 R KEGG: neu:NE1179 transmembrane protein; transmembrane protein complement(3696558..3697067) Nitrosomonas sp. Is79A3 10935593 YP_004696606.1 CDS Nit79A3_3486 NC_015731.1 3697210 3698262 R PFAM: Di-haem cytochrome c peroxidase; KEGG: net:Neut_1521 cytochrome-c peroxidase; Di-heme cytochrome c peroxidase complement(3697210..3698262) Nitrosomonas sp. Is79A3 10935594 YP_004696607.1 CDS Nit79A3_3487 NC_015731.1 3698445 3699284 R hypothetical protein complement(3698445..3699284) Nitrosomonas sp. Is79A3 10935595 YP_004696608.1 CDS Nit79A3_3488 NC_015731.1 3699494 3701203 R KEGG: cyp:PCC8801_3794 hypothetical protein; hypothetical protein complement(3699494..3701203) Nitrosomonas sp. Is79A3 10935596 YP_004696609.1 CDS Nit79A3_3489 NC_015731.1 3701700 3703082 R KEGG: net:Neut_2275 hypothetical protein; hypothetical protein complement(3701700..3703082) Nitrosomonas sp. Is79A3 10935597 YP_004696610.1 CDS Nit79A3_3490 NC_015731.1 3703475 3704551 D PFAM: Peptidase M4, thermolysin C-terminal; Peptidase M4, thermolysin; KEGG: pfs:PFLU4216 metalloprotease; peptidase M4 thermolysin 3703475..3704551 Nitrosomonas sp. Is79A3 10935598 YP_004696611.1 CDS Nit79A3_3491 NC_015731.1 3704576 3704914 D KEGG: mxa:MXAN_4012 hypothetical protein; hypothetical protein 3704576..3704914 Nitrosomonas sp. Is79A3 10935599 YP_004696612.1 CDS Nit79A3_3492 NC_015731.1 3705061 3705513 R SMART: Rhodanese-like; KEGG: nit:NAL212_3186 rhodanese-like protein; Rhodanese-like protein complement(3705061..3705513) Nitrosomonas sp. Is79A3 10935600 YP_004696613.1 CDS Nit79A3_3493 NC_015731.1 3705620 3706351 D TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: nit:NAL212_3185 pseudouridine synthase Rsu; SMART: RNA-binding S4; pseudouridine synthase 3705620..3706351 Nitrosomonas sp. Is79A3 10935601 YP_004696614.1 CDS Nit79A3_3494 NC_015731.1 3706419 3707693 D PFAM: Methyltransferase type 12; KEGG: rrj:RrIowa_0829 methyltransferase; type 12 methyltransferase 3706419..3707693 Nitrosomonas sp. Is79A3 10935602 YP_004696615.1 CDS Nit79A3_3495 NC_015731.1 3707709 3707942 D KEGG: nit:NAL212_3184 hypothetical protein; hypothetical protein 3707709..3707942 Nitrosomonas sp. Is79A3 10935603 YP_004696616.1 CDS Nit79A3_3496 NC_015731.1 3708033 3709697 D TIGRFAM: ATP-binding cassette protein, ChvD family; PFAM: ABC transporter-like; KEGG: nit:NAL212_3183 ATP-binding cassette protein, ChvD family; SMART: ATPase, AAA+ type, core; ATP-binding cassette protein, ChvD family 3708033..3709697 Nitrosomonas sp. Is79A3 10935604 YP_004696617.1 CDS Nit79A3_3497 NC_015731.1 3709743 3709922 D KEGG: tgr:Tgr7_1278 hypothetical protein; hypothetical protein 3709743..3709922 Nitrosomonas sp. Is79A3 10935605 YP_004696618.1 CDS Nit79A3_3498 NC_015731.1 3709973 3710206 D PFAM: CopG-like DNA-binding; KEGG: mrb:Mrub_0379 CopG domain-containing protein DNA-binding domain-containing protein; CopG family transcriptional regulator 3709973..3710206 Nitrosomonas sp. Is79A3 10935606 YP_004696619.1 CDS Nit79A3_3499 NC_015731.1 3710184 3711287 D PFAM: RecF/RecN/SMC protein, N-terminal; KEGG: gvi:gll1843 hypothetical protein; SMC domain-containing protein 3710184..3711287 Nitrosomonas sp. Is79A3 10935607 YP_004696620.1 CDS Nit79A3_3500 NC_015731.1 3711256 3711984 D KEGG: gvi:gll1842 hypothetical protein; hypothetical protein 3711256..3711984 Nitrosomonas sp. Is79A3 10935608 YP_004696621.1 CDS Nit79A3_3501 NC_015731.1 3712131 3715307 R PFAM: Protein of unknown function DUF748; KEGG: nit:NAL212_2894 hypothetical protein; hypothetical protein complement(3712131..3715307) Nitrosomonas sp. Is79A3 10935609 YP_004696622.1 CDS Nit79A3_3502 NC_015731.1 3715489 3715953 R PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: nit:NAL212_2893 peptidylprolyl isomerase; FKBP-type peptidylprolyl isomerase complement(3715489..3715953) Nitrosomonas sp. Is79A3 10935610 YP_004696623.1 CDS Nit79A3_3503 NC_015731.1 3716144 3716611 D PFAM: Protein of unknown function DUF454; KEGG: nit:NAL212_2892 hypothetical protein; hypothetical protein 3716144..3716611 Nitrosomonas sp. Is79A3 10935611 YP_004696624.1 CDS Nit79A3_3504 NC_015731.1 3716772 3716984 D hypothetical protein 3716772..3716984 Nitrosomonas sp. Is79A3 10935612 YP_004696625.1 CDS Nit79A3_3505 NC_015731.1 3717077 3718594 D TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3; KEGG: nit:NAL212_0245 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: Chemotaxis methyl-accepting receptor, signalling; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 3717077..3718594 Nitrosomonas sp. Is79A3 10935613 YP_004696626.1 CDS Nit79A3_3506 NC_015731.1 3718805 3719038 D KEGG: psa:PST_1428 lipoprotein; hypothetical protein 3718805..3719038 Nitrosomonas sp. Is79A3 10935614 YP_004696627.1 CDS Nit79A3_3507 NC_015731.1 3719035 3719394 D KEGG: nhl:Nhal_2691 hypothetical protein; hypothetical protein 3719035..3719394 Nitrosomonas sp. Is79A3 10935615 YP_004696628.1 CDS Nit79A3_3508 NC_015731.1 3719484 3720947 D KEGG: nit:NAL212_2891 hypothetical protein; hypothetical protein 3719484..3720947 Nitrosomonas sp. Is79A3 10935616 YP_004696629.1 CDS Nit79A3_3509 NC_015731.1 3721088 3722233 D TIGRFAM: Diguanylate cyclase, predicted; Haemerythrin-like, metal-binding; PFAM: Diguanylate cyclase, predicted; Haemerythrin/HHE cation-binding motif; KEGG: ttu:TERTU_4682 HHE/GGDEF domain-containing protein; SMART: Diguanylate cyclase, predicted; diguanylate cyclase with hemerythrin-like metal-binding domain 3721088..3722233 Nitrosomonas sp. Is79A3 10935617 YP_004696630.1 CDS Nit79A3_3510 NC_015731.1 3722286 3723308 R PFAM: VanZ like protein; KEGG: nit:NAL212_2886 VanZ family protein; VanZ family protein complement(3722286..3723308) Nitrosomonas sp. Is79A3 10935618 YP_004696631.1 CDS Nit79A3_3511 NC_015731.1 3723671 3724201 R KEGG: nit:NAL212_2885 T/U mismatch-specific DNA glycosylase; T/U mismatch-specific DNA glycosylase complement(3723671..3724201) Nitrosomonas sp. Is79A3 10935619 YP_004696632.1 CDS Nit79A3_3512 NC_015731.1 3724214 3724954 R TIGRFAM: Phosphoglycerate mutase 1; HAMAP: Phosphoglycerate mutase 1; KEGG: nit:NAL212_2884 phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase complement(3724214..3724954) Nitrosomonas sp. Is79A3 10935620 YP_004696633.1 CDS Nit79A3_3513 NC_015731.1 3724960 3726024 R PFAM: Fatty acid desaturase, type 1; KEGG: nit:NAL212_2883 fatty acid desaturase; fatty acid desaturase complement(3724960..3726024) Nitrosomonas sp. Is79A3 10935621 YP_004696634.1 CDS Nit79A3_3514 NC_015731.1 3726047 3726508 R KEGG: nit:NAL212_2882 hypothetical protein; hypothetical protein complement(3726047..3726508) Nitrosomonas sp. Is79A3 10935622 YP_004696635.1 CDS Nit79A3_3515 NC_015731.1 3726505 3727275 R PFAM: Nucleotidyl transferase; KEGG: nit:NAL212_2881 nucleotidyl transferase; Nucleotidyl transferase complement(3726505..3727275) Nitrosomonas sp. Is79A3 10935623 YP_004696636.1 CDS Nit79A3_3516 NC_015731.1 3727300 3728475 R PFAM: Aminotransferase, class V/Cysteine desulfurase; KEGG: nit:NAL212_2880 cysteine desulfurase; class V aminotransferase complement(3727300..3728475) Nitrosomonas sp. Is79A3 10935624 YP_004696637.1 CDS Nit79A3_3517 NC_015731.1 3728640 3729698 D KEGG: hba:Hbal_2404 hypothetical protein; hypothetical protein 3728640..3729698 Nitrosomonas sp. Is79A3 10935625 YP_004696638.1 CDS Nit79A3_3518 NC_015731.1 3729832 3731121 D KEGG: nha:Nham_1072 tetratricopeptide TPR_2; hypothetical protein 3729832..3731121 Nitrosomonas sp. Is79A3 10935626 YP_004696639.1 CDS Nit79A3_3519 NC_015731.1 3731183 3732856 D PFAM: Regulator of K+ conductance, N-terminal; KEGG: mpd:MCP_2384 hypothetical protein; TrkA-N domain-containing protein 3731183..3732856 Nitrosomonas sp. Is79A3 10935627 YP_004696640.1 CDS Nit79A3_3520 NC_015731.1 3732849 3734930 D KEGG: bxe:Bxe_C1257 hypothetical protein; hypothetical protein 3732849..3734930 Nitrosomonas sp. Is79A3 10935628 YP_004696641.1 CDS Nit79A3_3521 NC_015731.1 3735110 3736138 R SMART: Toll-Interleukin receptor; KEGG: pph:Ppha_1040 protein of unknown function DUF323; TIR protein complement(3735110..3736138) Nitrosomonas sp. Is79A3 10935629 YP_004696642.1 CDS Nit79A3_3522 NC_015731.1 3736412 3737014 R PFAM: Rickettsia 17kDa surface antigen; KEGG: net:Neut_2403 OmpA/MotB domain-containing protein; hypothetical protein complement(3736412..3737014) Nitrosomonas sp. Is79A3 10935630 YP_004696643.1 CDS Nit79A3_3523 NC_015731.1 3737044 3738387 R KEGG: azo:azo3774 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; serine/threonine protein kinase complement(3737044..3738387) Nitrosomonas sp. Is79A3 10935631 YP_004696644.1 CDS Nit79A3_3524 NC_015731.1 3738416 3739255 R KEGG: gau:GAU_3833 phosphoprotein phosphatase; PFAM: Protein phosphatase 2C, N-terminal; SMART: Protein phosphatase 2C-related; Ser/Thr phosphatase complement(3738416..3739255) Nitrosomonas sp. Is79A3 10935632 YP_004696645.1 CDS Nit79A3_3525 NC_015731.1 3739280 3741007 R KEGG: gau:GAU_3831 hypothetical protein; PFAM: Forkhead-associated; SMART: Forkhead-associated; Forkhead-associated protein complement(3739280..3741007) Nitrosomonas sp. Is79A3 10935633 YP_004696646.1 CDS Nit79A3_3526 NC_015731.1 3741438 3742133 R KEGG: nit:NAL212_0228 HhH-GPD family protein; PFAM: HhH-GPD domain; SMART: HhH-GPD domain; HhH-GPD family protein complement(3741438..3742133) Nitrosomonas sp. Is79A3 10935634 YP_004696647.1 CDS Nit79A3_3527 NC_015731.1 3742373 3742819 D TIGRFAM: MraZ; HAMAP: MraZ; KEGG: nit:NAL212_0229 MraZ protein; PFAM: MraZ domain; Protein mraZ 3742373..3742819 Nitrosomonas sp. Is79A3 10935635 YP_004696648.1 CDS Nit79A3_3528 NC_015731.1 3742840 3743778 D TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; KEGG: nit:NAL212_0230 S-adenosyl-methyltransferase MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; Ribosomal RNA small subunit methyltransferase H 3742840..3743778 Nitrosomonas sp. Is79A3 10935636 YP_004696649.1 CDS Nit79A3_3529 NC_015731.1 3743783 3744085 D KEGG: nit:NAL212_0231 cell division protein FtsL; TIGRFAM: Cell division protein, FtsL -like; PFAM: Cell division protein FtsL; cell division protein FtsL 3743783..3744085 Nitrosomonas sp. Is79A3 10935637 YP_004696650.1 CDS Nit79A3_3530 NC_015731.1 3744082 3745812 D PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: nit:NAL212_0232 peptidoglycan glycosyltransferase; penicillin-binding protein transpeptidase 3744082..3745812 Nitrosomonas sp. Is79A3 10935638 YP_004696651.1 CDS Nit79A3_3531 NC_015731.1 3745818 3747359 D TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; HAMAP: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: nit:NAL212_0233 UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 3745818..3747359 Nitrosomonas sp. Is79A3 10935639 YP_004696652.1 CDS Nit79A3_3532 NC_015731.1 3747362 3748765 D KEGG: nit:NAL212_0234 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 3747362..3748765 Nitrosomonas sp. Is79A3 10935640 YP_004696653.1 CDS Nit79A3_3533 NC_015731.1 3748756 3749841 D TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; KEGG: nit:NAL212_0235 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; Phospho-N-acetylmuramoyl-pentapeptide- transferase 3748756..3749841 Nitrosomonas sp. Is79A3 10935641 YP_004696654.1 CDS Nit79A3_3534 NC_015731.1 3749784 3751253 D TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; KEGG: nit:NAL212_0236 UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal; UDP-N-acetylmuramoylalanine--D-glutamate ligase 3749784..3751253 Nitrosomonas sp. Is79A3 10935642 YP_004696655.1 CDS Nit79A3_3535 NC_015731.1 3751257 3752417 D KEGG: nit:NAL212_0237 cell division protein FtsW; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein; cell division protein FtsW 3751257..3752417 Nitrosomonas sp. Is79A3 10935643 YP_004696656.1 CDS Nit79A3_3536 NC_015731.1 3752414 3753505 D TIGRFAM: N-acetylglucosaminyltransferase, MurG; HAMAP: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: nit:NAL212_0238 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyl transferase, family 28, C-terminal; Glycosyl transferase, family 28; UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 3752414..3753505 Nitrosomonas sp. Is79A3 10935644 YP_004696657.1 CDS Nit79A3_3537 NC_015731.1 3753495 3754922 D TIGRFAM: UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; KEGG: nit:NAL212_0239 UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; UDP-N-acetylmuramate--L-alanine ligase 3753495..3754922 Nitrosomonas sp. Is79A3 10935645 YP_004696658.1 CDS Nit79A3_3538 NC_015731.1 3754912 3755925 D TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: nit:NAL212_0240 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; UDP-N-acetylenolpyruvoylglucosamine reductase 3754912..3755925 Nitrosomonas sp. Is79A3 10935646 YP_004696659.1 CDS Nit79A3_3539 NC_015731.1 3755925 3756842 D TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: nit:NAL212_0241 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; D-alanine--D-alanine ligase 3755925..3756842 Nitrosomonas sp. Is79A3 10935647 YP_004696660.1 CDS Nit79A3_3540 NC_015731.1 3756832 3757608 D PFAM: Cell division protein FtsQ; Polypeptide-transport-associated, FtsQ-type; KEGG: nit:NAL212_0242 cell division protein FtsQ; cell division protein FtsQ 3756832..3757608 Nitrosomonas sp. Is79A3 10935648 YP_004696661.1 CDS Nit79A3_3541 NC_015731.1 3757629 3758867 D KEGG: nit:NAL212_0243 cell division protein FtsA; TIGRFAM: Cell division protein family FtsA; PFAM: Cell division protein FtsA domain; cell division protein FtsA 3757629..3758867 Nitrosomonas sp. Is79A3 10935649 YP_004696662.1 CDS Nit79A3_3542 NC_015731.1 3758936 3760087 D KEGG: nit:NAL212_0244 cell division protein FtsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; cell division protein FtsZ 3758936..3760087 Nitrosomonas sp. Is79A3 10935650 YP_004696663.1 CDS Nit79A3_3543 NC_015731.1 3760204 3762801 R PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; MCP methyltransferase, CheR-type; PAS fold-4; KEGG: aeh:Mlg_1118 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; SMART: MCP methyltransferase, CheR-type; chemotaxis protein CheR complement(3760204..3762801) Nitrosomonas sp. Is79A3 10935651 YP_004696664.1 CDS Nit79A3_3544 NC_015731.1 3762873 3763484 R KEGG: aeh:Mlg_1115 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator complement(3762873..3763484) Nitrosomonas sp. Is79A3 10935652 YP_004696665.1 CDS Nit79A3_3546 NC_015731.1 3763942 3765525 R KEGG: nit:NAL212_0062 transposase IS66; manually curated; PFAM: Transposase, IS66; transposase IS66 complement(3763942..3765525) Nitrosomonas sp. Is79A3 10935654 YP_004696666.1 CDS Nit79A3_3547 NC_015731.1 3765575 3765922 R KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein complement(3765575..3765922) Nitrosomonas sp. Is79A3 10935655 YP_004696667.1 CDS Nit79A3_3548 NC_015731.1 3765913 3766203 R KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein complement(3765913..3766203) Nitrosomonas sp. Is79A3 10935656 YP_004696668.1 CDS Nit79A3_3549 NC_015731.1 3766252 3766527 R KEGG: aeh:Mlg_1117 PAS/PAC sensor protein; hypothetical protein complement(3766252..3766527) Nitrosomonas sp. Is79A3 10935657 YP_004696669.1 CDS Nit79A3_3550 NC_015731.1 3766739 3767191 R KEGG: neu:NE2057 hypothetical protein; hypothetical protein complement(3766739..3767191) Nitrosomonas sp. Is79A3 10935658 YP_004696670.1 CDS Nit79A3_3551 NC_015731.1 3767252 3769273 R PFAM: Copper resistance D; Cytochrome c, class I; KEGG: neu:NE2058 cytochrome c, class IC:cytochrome c, class I; copper resistance D domain-containing protein complement(3767252..3769273) Nitrosomonas sp. Is79A3 10935659 YP_004696671.1 CDS Nit79A3_3552 NC_015731.1 3769280 3769684 R PFAM: Copper resistance protein CopC, core; KEGG: nmu:Nmul_A2761 copper resistance protein CopC; copper resistance protein CopC complement(3769280..3769684) Nitrosomonas sp. Is79A3 10935660 YP_004696672.1 CDS Nit79A3_3553 NC_015731.1 3770461 3771285 R TIGRFAM: Bacitracin resistance protein BacA; HAMAP: Undecaprenyl-diphosphatase; KEGG: nit:NAL212_3187 undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; UDP-diphosphatase complement(3770461..3771285) Nitrosomonas sp. Is79A3 10935661 YP_004696673.1 CDS Nit79A3_3554 NC_015731.1 3771346 3773241 R TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: nit:NAL212_3188 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC; Phosphomethylpyrimidine synthase complement(3771346..3773241) Nitrosomonas sp. Is79A3 10935662 YP_004696674.1 CDS Nit79A3_3555 NC_015731.1 3773451 3774104 D KEGG: nit:NAL212_3189 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; SMART: Ribosomal RNA adenine methylase transferase, N-terminal; protein-L-isoaspartate(D-aspartate) O-methyltransferase 3773451..3774104 Nitrosomonas sp. Is79A3 10935663 YP_004696675.1 CDS Nit79A3_3556 NC_015731.1 3774193 3775509 D KEGG: nit:NAL212_3190 type I secretion outer membrane protein, TolC family; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein; type I secretion outer membrane protein, TolC family 3774193..3775509 Nitrosomonas sp. Is79A3 10935664 YP_004696676.1 CDS Nit79A3_3557 NC_015731.1 3775697 3779110 R PFAM: Mechanosensitive ion channel MscS; KEGG: nit:NAL212_3191 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS complement(3775697..3779110) Nitrosomonas sp. Is79A3 10935665 YP_004696677.1 CDS Nit79A3_3558 NC_015731.1 3779845 3781239 D KEGG: nit:NAL212_3192 poly(A) polymerase; TIGRFAM: Poly(A) polymerase, PcnB; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase 3779845..3781239 Nitrosomonas sp. Is79A3 10935667 YP_004696678.1 CDS Nit79A3_3559 NC_015731.1 3781252 3781746 D KEGG: nit:NAL212_3193 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3781252..3781746 Nitrosomonas sp. Is79A3 10935668 YP_004696679.1 CDS Nit79A3_3560 NC_015731.1 3781803 3782594 D TIGRFAM: Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; KEGG: nit:NAL212_3194 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3781803..3782594 Nitrosomonas sp. Is79A3 10935669 YP_004696680.1 CDS Nit79A3_3561 NC_015731.1 3782609 3783433 D TIGRFAM: Pantoate-beta-alanine ligase; Cytidyltransferase-related; HAMAP: Pantoate-beta-alanine ligase; KEGG: nit:NAL212_3195 pantothenate synthetase; PFAM: Pantoate-beta-alanine ligase; Pantothenate synthetase 3782609..3783433 Nitrosomonas sp. Is79A3 10935670 Nit79A3_R0001 tRNA Nit79A3_R0001 NC_015731.1 167944 168020 D tRNA-Arg 167944..168020 Nitrosomonas sp. Is79A3 10932212 Nit79A3_R0002 tRNA Nit79A3_R0002 NC_015731.1 243519 243594 R tRNA-Met complement(243519..243594) Nitrosomonas sp. Is79A3 10932283 Nit79A3_R0003 tRNA Nit79A3_R0003 NC_015731.1 293415 293491 R tRNA-Met complement(293415..293491) Nitrosomonas sp. Is79A3 10932330 Nit79A3_R0004 tRNA Nit79A3_R0004 NC_015731.1 378925 379017 R tRNA-Ser complement(378925..379017) Nitrosomonas sp. Is79A3 10932421 Nit79A3_R0005 tRNA Nit79A3_R0005 NC_015731.1 516991 517077 D tRNA-Leu 516991..517077 Nitrosomonas sp. Is79A3 10932558 Nit79A3_R0007 tRNA Nit79A3_R0007 NC_015731.1 634480 634556 D tRNA-Ile 634480..634556 Nitrosomonas sp. Is79A3 10932673 Nit79A3_R0008 tRNA Nit79A3_R0008 NC_015731.1 634565 634640 D tRNA-Ala 634565..634640 Nitrosomonas sp. Is79A3 10932674 Nit79A3_R0011 tRNA Nit79A3_R0011 NC_015731.1 701054 701129 D tRNA-Val 701054..701129 Nitrosomonas sp. Is79A3 10932732 Nit79A3_R0012 tRNA Nit79A3_R0012 NC_015731.1 701154 701230 D tRNA-Asp 701154..701230 Nitrosomonas sp. Is79A3 10932733 Nit79A3_R0013 tRNA Nit79A3_R0013 NC_015731.1 890630 890714 D tRNA-Tyr 890630..890714 Nitrosomonas sp. Is79A3 10932897 Nit79A3_R0014 tRNA Nit79A3_R0014 NC_015731.1 890811 890884 D tRNA-Gly 890811..890884 Nitrosomonas sp. Is79A3 10932898 Nit79A3_R0015 tRNA Nit79A3_R0015 NC_015731.1 890934 891008 D tRNA-Thr 890934..891008 Nitrosomonas sp. Is79A3 10932899 Nit79A3_R0016 tRNA Nit79A3_R0016 NC_015731.1 892331 892406 D tRNA-Trp 892331..892406 Nitrosomonas sp. Is79A3 10932901 Nit79A3_R0017 tRNA Nit79A3_R0017 NC_015731.1 917855 917931 D tRNA-Pro 917855..917931 Nitrosomonas sp. Is79A3 10932923 Nit79A3_R0018 tRNA Nit79A3_R0018 NC_015731.1 1078491 1078580 R tRNA-Leu complement(1078491..1078580) Nitrosomonas sp. Is79A3 10933079 Nit79A3_R0019 tRNA Nit79A3_R0019 NC_015731.1 1078600 1078673 R tRNA-Cys complement(1078600..1078673) Nitrosomonas sp. Is79A3 10933080 Nit79A3_R0020 tRNA Nit79A3_R0020 NC_015731.1 1078787 1078861 R tRNA-Gly complement(1078787..1078861) Nitrosomonas sp. Is79A3 10933081 Nit79A3_R0021 tRNA Nit79A3_R0021 NC_015731.1 1475848 1475923 R tRNA-His complement(1475848..1475923) Nitrosomonas sp. Is79A3 10933438 Nit79A3_R0022 tRNA Nit79A3_R0022 NC_015731.1 1476001 1476077 R tRNA-Arg complement(1476001..1476077) Nitrosomonas sp. Is79A3 10933439 Nit79A3_R0023 tRNA Nit79A3_R0023 NC_015731.1 1476113 1476189 R tRNA-Pro complement(1476113..1476189) Nitrosomonas sp. Is79A3 10933440 Nit79A3_R0025 tRNA Nit79A3_R0025 NC_015731.1 1863981 1864056 R tRNA-Glu complement(1863981..1864056) Nitrosomonas sp. Is79A3 10933837 Nit79A3_R0026 tRNA Nit79A3_R0026 NC_015731.1 1864096 1864171 R tRNA-Ala complement(1864096..1864171) Nitrosomonas sp. Is79A3 10933838 Nit79A3_R0027 tRNA Nit79A3_R0027 NC_015731.1 1907532 1907607 D tRNA-Lys 1907532..1907607 Nitrosomonas sp. Is79A3 10933874 Nit79A3_R0029 tRNA Nit79A3_R0029 NC_015731.1 2004837 2004929 R tRNA-Ser complement(2004837..2004929) Nitrosomonas sp. Is79A3 10933977 Nit79A3_R0030 tRNA Nit79A3_R0030 NC_015731.1 2075436 2075520 R tRNA-Leu complement(2075436..2075520) Nitrosomonas sp. Is79A3 10934028 Nit79A3_R0031 tRNA Nit79A3_R0031 NC_015731.1 2098259 2098335 R tRNA-Val complement(2098259..2098335) Nitrosomonas sp. Is79A3 10934046 Nit79A3_R0032 tRNA Nit79A3_R0032 NC_015731.1 2115336 2115427 D tRNA-Ser 2115336..2115427 Nitrosomonas sp. Is79A3 10934066 Nit79A3_R0033 tRNA Nit79A3_R0033 NC_015731.1 2150639 2150714 D tRNA-Asn 2150639..2150714 Nitrosomonas sp. Is79A3 10934099 Nit79A3_R0034 tRNA Nit79A3_R0034 NC_015731.1 2205313 2205389 R tRNA-Met complement(2205313..2205389) Nitrosomonas sp. Is79A3 10934155 Nit79A3_R0035 tRNA Nit79A3_R0035 NC_015731.1 2213206 2213282 D tRNA-Arg 2213206..2213282 Nitrosomonas sp. Is79A3 10934163 Nit79A3_R0036 tRNA Nit79A3_R0036 NC_015731.1 2213354 2213429 D tRNA-Phe 2213354..2213429 Nitrosomonas sp. Is79A3 10934164 Nit79A3_R0037 tRNA Nit79A3_R0037 NC_015731.1 2419788 2419877 D tRNA-Ser 2419788..2419877 Nitrosomonas sp. Is79A3 10934366 Nit79A3_R0038 tRNA Nit79A3_R0038 NC_015731.1 2783079 2783163 R tRNA-Leu complement(2783079..2783163) Nitrosomonas sp. Is79A3 10934706 Nit79A3_R0040 tRNA Nit79A3_R0040 NC_015731.1 2912488 2912563 D tRNA-Thr 2912488..2912563 Nitrosomonas sp. Is79A3 10934842 Nit79A3_R0041 tRNA Nit79A3_R0041 NC_015731.1 3100025 3100109 R tRNA-Leu complement(3100025..3100109) Nitrosomonas sp. Is79A3 10935039 Nit79A3_R0042 tRNA Nit79A3_R0042 NC_015731.1 3294712 3294787 R tRNA-Thr complement(3294712..3294787) Nitrosomonas sp. Is79A3 10935218 Nit79A3_R0043 tRNA Nit79A3_R0043 NC_015731.1 3555408 3555483 D tRNA-Arg 3555408..3555483 Nitrosomonas sp. Is79A3 10935451 Nit79A3_R0044 tRNA Nit79A3_R0044 NC_015731.1 3660553 3660627 D tRNA-Gln 3660553..3660627 Nitrosomonas sp. Is79A3 10935561 Nit79A3_R0006 rRNA Nit79A3_R0006 NC_015731.1 632833 634358 D 16S ribosomal RNA 632833..634358 Nitrosomonas sp. Is79A3 10932672 Nit79A3_R0009 rRNA Nit79A3_R0009 NC_015731.1 634907 637834 D 23S ribosomal RNA 634907..637834 Nitrosomonas sp. Is79A3 10932675 Nit79A3_R0010 rRNA Nit79A3_R0010 NC_015731.1 637955 638067 D 5S ribosomal RNA 637955..638067 Nitrosomonas sp. Is79A3 10932676