-- dump date 20140619_164620 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_004693309.1 339481523 10935671 62..1435 1 NC_015731.1 SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; TIGRFAM: Chromosomal replication control, initiator DnaA; KEGG: nit:NAL212_0165 chromosomal replication initiator protein DnaA; HAMAP: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; chromosome replication initiator DnaA 1435 10935671 Nit79A3_0001 Nitrosomonas sp. Is79A3 chromosome replication initiator DnaA YP_004693309.1 62 D 261292 CDS YP_004693310.1 339481524 10932074 1626..2741 1 NC_015731.1 TIGRFAM: DNA polymerase III, beta chain; PFAM: DNA polymerase III, beta chain; KEGG: nit:NAL212_0166 DNA polymerase III, beta subunit; SMART: DNA polymerase III, beta chain; DNA polymerase III subunit beta 2741 10932074 Nit79A3_0002 Nitrosomonas sp. Is79A3 DNA polymerase III subunit beta YP_004693310.1 1626 D 261292 CDS YP_004693311.1 339481525 10932075 2824..5244 1 NC_015731.1 TIGRFAM: DNA gyrase, subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; KEGG: nit:NAL212_0167 DNA gyrase, B subunit; SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; DNA gyrase subunit B 5244 10932075 Nit79A3_0003 Nitrosomonas sp. Is79A3 DNA gyrase subunit B YP_004693311.1 2824 D 261292 CDS YP_004693312.1 339481526 10932076 5350..8253 1 NC_015731.1 KEGG: SNF2-like protein; PFAM: SNF2-related; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SNF2-like protein 8253 10932076 Nit79A3_0004 Nitrosomonas sp. Is79A3 SNF2-like protein YP_004693312.1 5350 D 261292 CDS YP_004693313.1 339481527 10932077 8253..10058 1 NC_015731.1 PFAM: Abortive phage infection; KEGG: abortive phage infection protein; Abortive phage infection protein 10058 10932077 Nit79A3_0005 Nitrosomonas sp. Is79A3 Abortive phage infection protein YP_004693313.1 8253 D 261292 CDS YP_004693314.1 339481528 10932078 10069..10185 1 NC_015731.1 hypothetical protein 10185 10932078 Nit79A3_0006 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693314.1 10069 D 261292 CDS YP_004693315.1 339481529 10932079 10182..11237 1 NC_015731.1 PFAM: Protein of unknown function DUF1016; KEGG: gpb:HDN1F_08370 protein of unknown function DUF1016; hypothetical protein 11237 10932079 Nit79A3_0007 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693315.1 10182 D 261292 CDS YP_004693316.1 339481530 10932080 11234..12922 1 NC_015731.1 PFAM: DNA methylase N-4/N-6; KEGG: avn:Avin_52350 adenine specific DNA methylase N-4/N-6; DNA methylase N-4/N-6 domain-containing protein 12922 10932080 Nit79A3_0008 Nitrosomonas sp. Is79A3 DNA methylase N-4/N-6 domain-containing protein YP_004693316.1 11234 D 261292 CDS YP_004693317.1 339481531 10932081 12922..13959 1 NC_015731.1 KEGG: gpb:HDN1F_08410 hypothetical protein; hypothetical protein 13959 10932081 Nit79A3_0009 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693317.1 12922 D 261292 CDS YP_004693318.1 339481532 10932082 13956..16682 1 NC_015731.1 PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: type III restriction protein res subunit; type III restriction protein res subunit 16682 10932082 Nit79A3_0010 Nitrosomonas sp. Is79A3 type III restriction protein res subunit YP_004693318.1 13956 D 261292 CDS YP_004693319.1 339481533 10932083 16948..18027 1 NC_015731.1 PFAM: WD40-like Beta Propeller; KEGG: neu:NE1761 hypothetical protein; hypothetical protein 18027 10932083 Nit79A3_0011 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693319.1 16948 D 261292 CDS YP_004693320.1 339481534 10932084 complement(18087..19901) 1 NC_015731.1 KEGG: nit:NAL212_0169 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; GTP-binding protein TypA 19901 10932084 Nit79A3_0012 Nitrosomonas sp. Is79A3 GTP-binding protein TypA YP_004693320.1 18087 R 261292 CDS YP_004693321.1 339481535 10932085 20272..20664 1 NC_015731.1 KEGG: bba:Bd3611 hypothetical protein; hypothetical protein 20664 10932085 Nit79A3_0013 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693321.1 20272 D 261292 CDS YP_004693322.1 339481536 10932086 complement(20757..20948) 1 NC_015731.1 KEGG: nit:NAL212_0171 hypothetical protein; hypothetical protein 20948 10932086 Nit79A3_0014 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693322.1 20757 R 261292 CDS YP_004693323.1 339481537 10932087 21109..21435 1 NC_015731.1 KEGG: nit:NAL212_0172 CutA1 divalent ion tolerance protein; manually curated; PFAM: Divalent ion tolerance protein, CutA1; CutA1 divalent ion tolerance protein 21435 10932087 Nit79A3_0015 Nitrosomonas sp. Is79A3 CutA1 divalent ion tolerance protein YP_004693323.1 21109 D 261292 CDS YP_004693324.1 339481538 10932088 21452..23389 1 NC_015731.1 KEGG: nit:NAL212_0173 protein-disulfide reductase; HAMAP: Thiol:disulfide interchange protein dsbD; PFAM: Cytochrome c assembly protein, transmembrane region; Thioredoxin domain; thiol:disulfide interchange protein DsbD 23389 10932088 Nit79A3_0016 Nitrosomonas sp. Is79A3 thiol:disulfide interchange protein DsbD YP_004693324.1 21452 D 261292 CDS YP_004693325.1 339481539 10932089 23449..24039 1 NC_015731.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: nit:NAL212_0174 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 24039 10932089 Nit79A3_0017 Nitrosomonas sp. Is79A3 alkyl hydroperoxide reductase YP_004693325.1 23449 D 261292 CDS YP_004693326.1 339481540 10932090 24757..25086 1 NC_015731.1 PFAM: Transport-associated; KEGG: nit:NAL212_0175 transport-associated protein; transport-associated protein 25086 10932090 Nit79A3_0018 Nitrosomonas sp. Is79A3 transport-associated protein YP_004693326.1 24757 D 261292 CDS YP_004693327.1 339481541 10932091 25115..25492 1 NC_015731.1 KEGG: nit:NAL212_0176 hypothetical protein; hypothetical protein 25492 10932091 Nit79A3_0019 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693327.1 25115 D 261292 CDS YP_004693328.1 339481542 10932092 complement(25493..26398) 1 NC_015731.1 KEGG: nit:NAL212_0177 PP-loop domain-containing protein; HAMAP: tRNA 2-thiocytidine biosynthesis protein TtcA; PFAM: PP-loop; tRNA 2-thiocytidine biosynthesis protein TtcA 26398 10932092 Nit79A3_0020 Nitrosomonas sp. Is79A3 tRNA 2-thiocytidine biosynthesis protein TtcA YP_004693328.1 25493 R 261292 CDS YP_004693329.1 339481543 10932093 26562..27014 1 NC_015731.1 PFAM: Blue (type 1) copper domain; KEGG: nit:NAL212_0178 blue (type 1) copper domain-containing protein; blue (type 1) copper domain-containing protein 27014 10932093 Nit79A3_0021 Nitrosomonas sp. Is79A3 blue (type 1) copper domain-containing protein YP_004693329.1 26562 D 261292 CDS YP_004693330.1 339481544 10932094 27011..27550 1 NC_015731.1 PFAM: Protein of unknown function DUF411; KEGG: nit:NAL212_0179 hypothetical protein; hypothetical protein 27550 10932094 Nit79A3_0022 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693330.1 27011 D 261292 CDS YP_004693331.1 339481545 10932095 27563..28030 1 NC_015731.1 PFAM: Cytochrome c, class I; KEGG: nit:NAL212_0180 cytochrome c class I; cytochrome c class I 28030 10932095 Nit79A3_0023 Nitrosomonas sp. Is79A3 cytochrome c class I YP_004693331.1 27563 D 261292 CDS YP_004693332.1 339481546 10932096 complement(28154..28543) 1 NC_015731.1 KEGG: nit:NAL212_0181 hypothetical protein; hypothetical protein 28543 10932096 Nit79A3_0024 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693332.1 28154 R 261292 CDS YP_004693333.1 339481547 10932097 28809..29123 1 NC_015731.1 KEGG: net:Neut_0492 transport-associated; PFAM: Transport-associated; SMART: Transport-associated and nodulation region, bacteria; transport-associated protein 29123 10932097 Nit79A3_0025 Nitrosomonas sp. Is79A3 transport-associated protein YP_004693333.1 28809 D 261292 CDS YP_004693334.1 339481548 10932098 29743..38709 1 NC_015731.1 PFAM: Glycosyltransferase 36; carbohydrate binding; Glycosyltransferase 36 associated; KEGG: net:Neut_1665 glycosyltransferase 36; glycosyltransferase 36 38709 10932098 Nit79A3_0026 Nitrosomonas sp. Is79A3 glycosyltransferase 36 YP_004693334.1 29743 D 261292 CDS YP_004693335.1 339481549 10932099 38684..39760 1 NC_015731.1 KEGG: net:Neut_2089 transaldolase; TIGRFAM: Transaldolase subfamily; PFAM: Transaldolase; transaldolase 39760 10932099 Nit79A3_0027 Nitrosomonas sp. Is79A3 transaldolase YP_004693335.1 38684 D 261292 CDS YP_004693336.1 339481550 10932100 39887..40192 1 NC_015731.1 PFAM: Protein of unknown function DUF1840; KEGG: net:Neut_0486 hypothetical protein; hypothetical protein 40192 10932100 Nit79A3_0028 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693336.1 39887 D 261292 CDS YP_004693337.1 339481551 10932101 40288..41310 1 NC_015731.1 KEGG: fri:FraEuI1c_1222 6-phosphogluconate dehydrogenase, decarboxylating; TIGRFAM: 6-phosphogluconate dehydrogenase related protein; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase 41310 10932101 Nit79A3_0029 Nitrosomonas sp. Is79A3 6-phosphogluconate dehydrogenase YP_004693337.1 40288 D 261292 CDS YP_004693338.1 339481552 10932102 41312..42736 1 NC_015731.1 KEGG: rfr:Rfer_4034 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: Glucose-6-phosphate dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 42736 10932102 Nit79A3_0030 Nitrosomonas sp. Is79A3 glucose-6-phosphate 1-dehydrogenase YP_004693338.1 41312 D 261292 CDS YP_004693339.1 339481553 10932103 42797..43102 1 NC_015731.1 PFAM: Protein of unknown function DUF1840; KEGG: net:Neut_0486 hypothetical protein; hypothetical protein 43102 10932103 Nit79A3_0031 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693339.1 42797 D 261292 CDS YP_004693340.1 339481554 10932104 43434..45200 1 NC_015731.1 KEGG: rfr:Rfer_1145 phosphoglucomutase; TIGRFAM: Phosphoglucomutase, alpha-D-glucose specific; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; phosphoglucomutase, alpha-D-glucose phosphate-specific 45200 10932104 Nit79A3_0032 Nitrosomonas sp. Is79A3 phosphoglucomutase, alpha-D-glucose phosphate-specific YP_004693340.1 43434 D 261292 CDS YP_004693341.1 339481555 10932105 45243..47789 1 NC_015731.1 KEGG: dat:HRM2_24160 GlgP3; TIGRFAM: Alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; alpha-glucan phosphorylase 47789 10932105 Nit79A3_0033 Nitrosomonas sp. Is79A3 alpha-glucan phosphorylase YP_004693341.1 45243 D 261292 CDS YP_004693342.1 339481556 10932106 47908..50541 1 NC_015731.1 KEGG: magnesium-importing ATPase; TIGRFAM: ATPase, P-type, magnesium-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; magnesium-translocating P-type ATPase 50541 10932106 Nit79A3_0034 Nitrosomonas sp. Is79A3 magnesium-translocating P-type ATPase YP_004693342.1 47908 D 261292 CDS YP_004693343.1 339481557 10932107 50531..51772 1 NC_015731.1 TIGRFAM: Acetate kinase; HAMAP: Acetate kinase; KEGG: nha:Nham_4372 acetate kinase; PFAM: Acetate/butyrate kinase; Acetate kinase 51772 10932107 Nit79A3_0035 Nitrosomonas sp. Is79A3 Acetate kinase YP_004693343.1 50531 D 261292 CDS YP_004693344.1 339481558 10932108 51775..54144 1 NC_015731.1 KEGG: dba:Dbac_1358 phosphoketolase; HAMAP: phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal; phosphoketolase 54144 10932108 Nit79A3_0036 Nitrosomonas sp. Is79A3 phosphoketolase YP_004693344.1 51775 D 261292 CDS YP_004693345.1 339481559 10932109 54175..55431 1 NC_015731.1 KEGG: dba:Dbac_0953 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2254, membrane; hypothetical protein 55431 10932109 Nit79A3_0037 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693345.1 54175 D 261292 CDS YP_004693346.1 339481560 10932110 55463..56902 1 NC_015731.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Alternate ATPase, F1 complex, beta subunit; ATPase, F1 complex, beta subunit; KEGG: rfr:Rfer_1161 F0F1 ATP synthase subunit beta; HAMAP: ATPase, F1 complex, beta subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit beta 56902 10932110 Nit79A3_0038 Nitrosomonas sp. Is79A3 ATP synthase subunit beta YP_004693346.1 55463 D 261292 CDS YP_004693347.1 339481561 10932111 56877..57281 1 NC_015731.1 KEGG: rfr:Rfer_1162 F0F1 ATP synthase subunit epsilon; TIGRFAM: alternate F1F0 ATPase, F1 subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; alternate F1F0 ATPase, F1 subunit epsilon 57281 10932111 Nit79A3_0039 Nitrosomonas sp. Is79A3 alternate F1F0 ATPase, F1 subunit epsilon YP_004693347.1 56877 D 261292 CDS YP_004693348.1 339481562 10932112 57274..57612 1 NC_015731.1 KEGG: mmw:Mmwyl1_1956 F0F1-ATPase subunit; TIGRFAM: F0F1-ATPase subunit, PFAM: F0F1-ATPase subunit; F0F1-ATPase subunit 57612 10932112 Nit79A3_0040 Nitrosomonas sp. Is79A3 F0F1-ATPase subunit YP_004693348.1 57274 D 261292 CDS YP_004693349.1 339481563 10932113 57605..57916 1 NC_015731.1 TIGRFAM: ATPase, F1/F0 complex, subunit 2, Methanosarcina type; KEGG: dba:Dbac_0949 F1/F0 ATPase; F1/F0 ATPase, Methanosarcina type subunit 2 57916 10932113 Nit79A3_0041 Nitrosomonas sp. Is79A3 F1/F0 ATPase, Methanosarcina type subunit 2 YP_004693349.1 57605 D 261292 CDS YP_004693350.1 339481564 10932114 57906..58607 1 NC_015731.1 TIGRFAM: Alternate ATPase, F0 complex, subunit A; ATPase, F0 complex, subunit A; HAMAP: ATP synthase subunit a; KEGG: rfr:Rfer_1165 F0F1 ATP synthase subunit A; PFAM: ATPase, F0 complex, subunit A; ATP synthase subunit a 58607 10932114 Nit79A3_0042 Nitrosomonas sp. Is79A3 ATP synthase subunit a YP_004693350.1 57906 D 261292 CDS YP_004693351.1 339481565 10932115 58632..58913 1 NC_015731.1 TIGRFAM: Alternate ATPase, F0 complex, subunit C; ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: mmw:Mmwyl1_1959 F0F1 ATP synthase subunit C; PFAM: ATPase, F0/V0 complex, subunit C; ATP synthase subunit c 58913 10932115 Nit79A3_0043 Nitrosomonas sp. Is79A3 ATP synthase subunit c YP_004693351.1 58632 D 261292 CDS YP_004693352.1 339481566 10932116 58917..59957 1 NC_015731.1 TIGRFAM: Alternate ATPase, F0 complex, subunit B; HAMAP: ATP synthase subunit b; KEGG: rfr:Rfer_1167 H+-transporting two-sector ATPase, B/B' subunit; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; ATP synthase subunit b 59957 10932116 Nit79A3_0044 Nitrosomonas sp. Is79A3 ATP synthase subunit b YP_004693352.1 58917 D 261292 CDS YP_004693353.1 339481567 10932117 59960..61561 1 NC_015731.1 TIGRFAM: Alternate ATPase, F1 complex, alpha subunit; ATPase, F1 complex, alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; KEGG: rfr:Rfer_1168 F0F1 ATP synthase subunit alpha; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit alpha 61561 10932117 Nit79A3_0045 Nitrosomonas sp. Is79A3 ATP synthase subunit alpha YP_004693353.1 59960 D 261292 CDS YP_004693354.1 339481568 10932118 61558..62505 1 NC_015731.1 KEGG: dba:Dbac_0944 alternate F1F0 ATPase, F1 subunit gamma; TIGRFAM: Alternate ATPase, F1 complex, subunit gamma; PFAM: ATPase, F1 complex, gamma subunit; alternate F1F0 ATPase, F1 subunit gamma 62505 10932118 Nit79A3_0046 Nitrosomonas sp. Is79A3 alternate F1F0 ATPase, F1 subunit gamma YP_004693354.1 61558 D 261292 CDS YP_004693355.1 339481569 10932119 62610..63488 1 NC_015731.1 KEGG: app:CAP2UW1_3404 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase 63488 10932119 Nit79A3_0047 Nitrosomonas sp. Is79A3 UTP-glucose-1-phosphate uridylyltransferase YP_004693355.1 62610 D 261292 CDS YP_004693356.1 339481570 10932120 complement(63716..64339) 1 NC_015731.1 PFAM: Cell wall hydrolase, SleB; KEGG: nit:NAL212_3139 cell wall hydrolase SleB; cell wall hydrolase SleB 64339 10932120 Nit79A3_0048 Nitrosomonas sp. Is79A3 cell wall hydrolase SleB YP_004693356.1 63716 R 261292 CDS YP_004693357.1 339481571 10932121 complement(64567..66150) 1 NC_015731.1 KEGG: nit:NAL212_0062 transposase IS66; manually curated; PFAM: Transposase, IS66; transposase IS66 66150 10932121 Nit79A3_0049 Nitrosomonas sp. Is79A3 transposase IS66 YP_004693357.1 64567 R 261292 CDS YP_004693358.1 339481572 10932122 complement(66200..66547) 1 NC_015731.1 KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein 66547 10932122 Nit79A3_0050 Nitrosomonas sp. Is79A3 IS66 Orf2 family protein YP_004693358.1 66200 R 261292 CDS YP_004693359.1 339481573 10932123 complement(66538..66828) 1 NC_015731.1 KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein 66828 10932123 Nit79A3_0051 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693359.1 66538 R 261292 CDS YP_004693360.1 339481574 10932125 complement(67487..68041) 1 NC_015731.1 KEGG: nit:NAL212_1338 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 68041 10932125 Nit79A3_0053 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004693360.1 67487 R 261292 CDS YP_004693361.1 339481575 10932127 complement(69143..70342) 1 NC_015731.1 KEGG: nit:NAL212_2784 catalase related subgroup domain-containing protein; catalase related subgroup domain-containing protein 70342 10932127 Nit79A3_0055 Nitrosomonas sp. Is79A3 catalase related subgroup domain-containing protein YP_004693361.1 69143 R 261292 CDS YP_004693362.1 339481576 10932128 complement(70384..71586) 1 NC_015731.1 PFAM: Protein of unknown function DUF1207; KEGG: neu:NE1230 hypothetical protein; hypothetical protein 71586 10932128 Nit79A3_0056 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693362.1 70384 R 261292 CDS YP_004693363.1 339481577 10932129 71919..72131 1 NC_015731.1 KEGG: har:HEAR2625 lipoprotein; lipoprotein 72131 10932129 Nit79A3_0057 Nitrosomonas sp. Is79A3 lipoprotein YP_004693363.1 71919 D 261292 CDS YP_004693364.1 339481578 10932130 72279..74411 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; Signal transduction response regulator, receiver region; KEGG: tsa:AciPR4_0617 response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 74411 10932130 Nit79A3_0058 Nitrosomonas sp. Is79A3 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) YP_004693364.1 72279 D 261292 CDS YP_004693365.1 339481579 10932131 75506..76381 1 NC_015731.1 PFAM: Protein of unknown function DUF2063; Protein of unknown function DUF692; KEGG: nmu:Nmul_A2549 hypothetical protein; hypothetical protein 76381 10932131 Nit79A3_0059 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693365.1 75506 D 261292 CDS YP_004693366.1 339481580 10932132 76501..77541 1 NC_015731.1 KEGG: mca:MCA0084 hypothetical protein; hypothetical protein 77541 10932132 Nit79A3_0060 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693366.1 76501 D 261292 CDS YP_004693367.1 339481581 10932133 complement(77738..78598) 1 NC_015731.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: shw:Sputw3181_2243 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 78598 10932133 Nit79A3_0061 Nitrosomonas sp. Is79A3 OmpA/MotB domain-containing protein YP_004693367.1 77738 R 261292 CDS YP_004693368.1 339481582 10932134 complement(78595..79011) 1 NC_015731.1 KEGG: hypothetical protein; hypothetical protein 79011 10932134 Nit79A3_0062 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693368.1 78595 R 261292 CDS YP_004693369.1 339481583 10932135 complement(79473..80213) 1 NC_015731.1 PFAM: Cyclic nucleotide-binding; KEGG: cyclic nucleotide-binding domain-containing protein; Crp/Fnr family transcriptional regulator 80213 10932135 Nit79A3_0063 Nitrosomonas sp. Is79A3 Crp/Fnr family transcriptional regulator YP_004693369.1 79473 R 261292 CDS YP_004693370.1 339481584 10932136 complement(80452..81180) 1 NC_015731.1 KEGG: net:Neut_0491 transcriptional regulator, Crp/Fnr family protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; Crp/Fnr family transcriptional regulator 81180 10932136 Nit79A3_0064 Nitrosomonas sp. Is79A3 Crp/Fnr family transcriptional regulator YP_004693370.1 80452 R 261292 CDS YP_004693371.1 339481585 10932137 81538..81681 1 NC_015731.1 KEGG: cli:Clim_0907 hypothetical protein; hypothetical protein 81681 10932137 Nit79A3_0065 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693371.1 81538 D 261292 CDS YP_004693372.1 339481586 10932138 81736..81954 1 NC_015731.1 KEGG: har:HEAR0765 hypothetical protein; hypothetical protein 81954 10932138 Nit79A3_0066 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693372.1 81736 D 261292 CDS YP_004693373.1 339481587 10932139 82255..82485 1 NC_015731.1 KEGG: net:Neut_0490 hypothetical protein; hypothetical protein 82485 10932139 Nit79A3_0067 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693373.1 82255 D 261292 CDS YP_004693374.1 339481588 10932140 82552..82854 1 NC_015731.1 KEGG: net:Neut_0488 hypothetical protein; hypothetical protein 82854 10932140 Nit79A3_0068 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693374.1 82552 D 261292 CDS YP_004693375.1 339481589 10932141 83069..84265 1 NC_015731.1 KEGG: nit:NAL212_1623 hypothetical protein; hypothetical protein 84265 10932141 Nit79A3_0069 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693375.1 83069 D 261292 CDS YP_004693376.1 339481590 10932142 84536..85642 1 NC_015731.1 PFAM: Uncharacterised protein family UPF0118; KEGG: nit:NAL212_2783 hypothetical protein; hypothetical protein 85642 10932142 Nit79A3_0070 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693376.1 84536 D 261292 CDS YP_004693377.1 339481591 10932143 86165..86452 1 NC_015731.1 PFAM: Protein of unknown function DUF883, ElaB; KEGG: nit:NAL212_2781 hypothetical protein; hypothetical protein 86452 10932143 Nit79A3_0071 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693377.1 86165 D 261292 CDS YP_004693378.1 339481592 10932144 86466..86945 1 NC_015731.1 KEGG: nit:NAL212_2780 hypothetical protein; hypothetical protein 86945 10932144 Nit79A3_0072 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693378.1 86466 D 261292 CDS YP_004693379.1 339481593 10932145 87054..88076 1 NC_015731.1 PFAM: Ketopantoate reductase ApbA/PanE, C-terminal; Ketopantoate reductase ApbA/PanE, N-terminal; KEGG: nit:NAL212_1794 ketopantoate reductase ApbA/PanE domain-containing protein; Ketopantoate reductase ApbA/PanE domain-containing protein 88076 10932145 Nit79A3_0073 Nitrosomonas sp. Is79A3 Ketopantoate reductase ApbA/PanE domain-containing protein YP_004693379.1 87054 D 261292 CDS YP_004693380.1 339481594 10932146 88073..89059 1 NC_015731.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: nit:NAL212_1793 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 89059 10932146 Nit79A3_0074 Nitrosomonas sp. Is79A3 NAD-dependent epimerase/dehydratase YP_004693380.1 88073 D 261292 CDS YP_004693381.1 339481595 10932147 complement(89097..91052) 1 NC_015731.1 KEGG: net:Neut_2188 arginine decarboxylase; TIGRFAM: Arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; arginine decarboxylase 91052 10932147 Nit79A3_0075 Nitrosomonas sp. Is79A3 arginine decarboxylase YP_004693381.1 89097 R 261292 CDS YP_004693382.1 339481596 10932148 complement(91049..92002) 1 NC_015731.1 KEGG: net:Neut_2187 agmatinase; TIGRFAM: agmatinase; PFAM: Ureohydrolase; agmatinase 92002 10932148 Nit79A3_0076 Nitrosomonas sp. Is79A3 agmatinase YP_004693382.1 91049 R 261292 CDS YP_004693383.1 339481597 10932149 complement(92294..92758) 1 NC_015731.1 KEGG: nit:NAL212_2786 hypothetical protein; hypothetical protein 92758 10932149 Nit79A3_0077 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693383.1 92294 R 261292 CDS YP_004693384.1 339481598 10932150 93400..93813 1 NC_015731.1 KEGG: dar:Daro_2088 hypothetical protein; hypothetical protein 93813 10932150 Nit79A3_0078 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693384.1 93400 D 261292 CDS YP_004693385.1 339481599 10932151 94251..94670 1 NC_015731.1 PFAM: PRC-barrel; KEGG: net:Neut_2352 PRC-barrel domain-containing protein; PRC-barrel domain-containing protein 94670 10932151 Nit79A3_0079 Nitrosomonas sp. Is79A3 PRC-barrel domain-containing protein YP_004693385.1 94251 D 261292 CDS YP_004693386.1 339481600 10932152 95252..95539 1 NC_015731.1 PFAM: Protein of unknown function DUF883, ElaB; KEGG: nit:NAL212_2781 hypothetical protein; hypothetical protein 95539 10932152 Nit79A3_0080 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693386.1 95252 D 261292 CDS YP_004693387.1 339481601 10932153 complement(95798..96691) 1 NC_015731.1 KEGG: nmu:Nmul_A2420 hypothetical protein; hypothetical protein 96691 10932153 Nit79A3_0081 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693387.1 95798 R 261292 CDS YP_004693388.1 339481602 10932154 complement(97022..97180) 1 NC_015731.1 KEGG: rfr:Rfer_1879 hypothetical protein; hypothetical protein 97180 10932154 Nit79A3_0082 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693388.1 97022 R 261292 CDS YP_004693389.1 339481603 10932155 complement(97202..98392) 1 NC_015731.1 PFAM: Fatty acid desaturase, type 1; KEGG: net:Neut_0779 fatty acid desaturase; fatty acid desaturase 98392 10932155 Nit79A3_0083 Nitrosomonas sp. Is79A3 fatty acid desaturase YP_004693389.1 97202 R 261292 CDS YP_004693390.1 339481604 10932156 98612..99355 1 NC_015731.1 KEGG: mep:MPQ_2599 transcriptional regulator, crp/fnr family; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 99355 10932156 Nit79A3_0084 Nitrosomonas sp. Is79A3 Crp/Fnr family transcriptional regulator YP_004693390.1 98612 D 261292 CDS YP_004693391.1 339481605 10932157 complement(99431..100108) 1 NC_015731.1 TIGRFAM: ABC transporter ATP-binding subunit, DevA type; PFAM: ABC transporter-like; KEGG: cyh:Cyan8802_3799 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; DevA family ABC exporter ATP-binding subunit 100108 10932157 Nit79A3_0085 Nitrosomonas sp. Is79A3 DevA family ABC exporter ATP-binding subunit YP_004693391.1 99431 R 261292 CDS YP_004693392.1 339481606 10932158 complement(100119..101282) 1 NC_015731.1 KEGG: ana:alr3711 heterocyst specific ABC-transporter, membrane spanning subunit; TIGRFAM: DevC protein; PFAM: Protein of unknown function DUF214, permase predicted; DevC protein 101282 10932158 Nit79A3_0086 Nitrosomonas sp. Is79A3 DevC protein YP_004693392.1 100119 R 261292 CDS YP_004693393.1 339481607 10932159 complement(101285..102181) 1 NC_015731.1 TIGRFAM: ABC transporter membrane fusion protein, DevB type; KEGG: cyn:Cyan7425_0330 DevB family ABC exporter membrane fusion protein; DevB family ABC exporter membrane fusion protein 102181 10932159 Nit79A3_0087 Nitrosomonas sp. Is79A3 DevB family ABC exporter membrane fusion protein YP_004693393.1 101285 R 261292 CDS YP_004693394.1 339481608 10932160 complement(102271..105876) 1 NC_015731.1 PFAM: Sulphatase-modifying factor; NACHT nucleoside triphosphatase; KEGG: app:CAP2UW1_2323 hypothetical protein; sulfatase-modifying factor protein 105876 10932160 Nit79A3_0088 Nitrosomonas sp. Is79A3 sulfatase-modifying factor protein YP_004693394.1 102271 R 261292 CDS YP_004693395.1 339481609 10932161 106122..106451 1 NC_015731.1 PFAM: NTP pyrophosphohydrolase MazG, catalytic core; KEGG: nit:NAL212_3178 MazG nucleotide pyrophosphohydrolase; nucleotide pyrophosphohydrolase 106451 10932161 Nit79A3_0089 Nitrosomonas sp. Is79A3 nucleotide pyrophosphohydrolase YP_004693395.1 106122 D 261292 CDS YP_004693396.1 339481610 10932162 complement(106478..107626) 1 NC_015731.1 PFAM: Methyltransferase small; KEGG: nit:NAL212_3177 methyltransferase small; methyltransferase small 107626 10932162 Nit79A3_0090 Nitrosomonas sp. Is79A3 methyltransferase small YP_004693396.1 106478 R 261292 CDS YP_004693397.1 339481611 10932163 107843..109180 1 NC_015731.1 KEGG: nit:NAL212_3176 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 109180 10932163 Nit79A3_0091 Nitrosomonas sp. Is79A3 DEAD/DEAH box helicase domain-containing protein YP_004693397.1 107843 D 261292 CDS YP_004693398.1 339481612 10932164 complement(109216..109740) 1 NC_015731.1 PFAM: Protein of unknown function DUF192; KEGG: nit:NAL212_3175 hypothetical protein; hypothetical protein 109740 10932164 Nit79A3_0092 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693398.1 109216 R 261292 CDS YP_004693399.1 339481613 10932165 complement(109750..112956) 1 NC_015731.1 KEGG: nit:NAL212_3174 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 112956 10932165 Nit79A3_0093 Nitrosomonas sp. Is79A3 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004693399.1 109750 R 261292 CDS YP_004693400.1 339481614 10932166 complement(112953..114194) 1 NC_015731.1 KEGG: nit:NAL212_3173 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 114194 10932166 Nit79A3_0094 Nitrosomonas sp. Is79A3 RND family efflux transporter MFP subunit YP_004693400.1 112953 R 261292 CDS YP_004693401.1 339481615 10932167 complement(114344..115738) 1 NC_015731.1 KEGG: nit:NAL212_3171 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; RND efflux system, outer membrane lipoprotein, NodT family 115738 10932167 Nit79A3_0095 Nitrosomonas sp. Is79A3 RND efflux system, outer membrane lipoprotein, NodT family YP_004693401.1 114344 R 261292 CDS YP_004693402.1 339481616 10932168 116032..117834 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; GAF; KEGG: eba:ebA163 sensory box/GGDEF family protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; GAF; GAF sensor-containing diguanylate cyclase/phosphodiesterase 117834 10932168 Nit79A3_0096 Nitrosomonas sp. Is79A3 GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_004693402.1 116032 D 261292 CDS YP_004693403.1 339481617 10932169 118137..120035 1 NC_015731.1 TIGRFAM: Glucose-inhibited division protein A; HAMAP: Glucose-inhibited division protein A; KEGG: nit:NAL212_3161 glucose inhibited division protein A; PFAM: Glucose-inhibited division protein A-related; tRNA uridine 5-carboxymethylaminomethyl modification protein mnmG 120035 10932169 Nit79A3_0097 Nitrosomonas sp. Is79A3 tRNA uridine 5-carboxymethylaminomethyl modification protein mnmG YP_004693403.1 118137 D 261292 CDS YP_004693404.1 339481618 10932170 120032..120670 1 NC_015731.1 TIGRFAM: rRNA small subunit methyltransferase G; HAMAP: rRNA small subunit methyltransferase G; KEGG: nit:NAL212_3160 methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G; Ribosomal RNA small subunit methyltransferase G 120670 10932170 Nit79A3_0098 Nitrosomonas sp. Is79A3 Ribosomal RNA small subunit methyltransferase G YP_004693404.1 120032 D 261292 CDS YP_004693405.1 339481619 10932171 120730..121488 1 NC_015731.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: nit:NAL212_3159 cobyrinic acid ac-diamide synthase; Cobyrinic acid ac-diamide synthase 121488 10932171 Nit79A3_0099 Nitrosomonas sp. Is79A3 Cobyrinic acid ac-diamide synthase YP_004693405.1 120730 D 261292 CDS YP_004693406.1 339481620 10932172 121513..122352 1 NC_015731.1 TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: nit:NAL212_3158 ParB-like partition protein; SMART: ParB-like nuclease; parB-like partition protein 122352 10932172 Nit79A3_0100 Nitrosomonas sp. Is79A3 parB-like partition protein YP_004693406.1 121513 D 261292 CDS YP_004693407.1 339481621 10932173 122393..122575 1 NC_015731.1 KEGG: nit:NAL212_3157 hypothetical protein; HAMAP: UPF0434 protein ycaR; PFAM: Protein of unknown function DUF343; hypothetical protein 122575 10932173 Nit79A3_0101 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693407.1 122393 D 261292 CDS YP_004693408.1 339481622 10932174 122597..123565 1 NC_015731.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: nit:NAL212_3156 ADP-ribosylation/crystallin J1; ADP-ribosylation/Crystallin J1 123565 10932174 Nit79A3_0102 Nitrosomonas sp. Is79A3 ADP-ribosylation/Crystallin J1 YP_004693408.1 122597 D 261292 CDS YP_004693409.1 339481623 10932175 123840..124790 1 NC_015731.1 PFAM: HpcH/HpaI aldolase; KEGG: nit:NAL212_0420 citryl-CoA lyase; HpcH/HpaI aldolase 124790 10932175 Nit79A3_0103 Nitrosomonas sp. Is79A3 HpcH/HpaI aldolase YP_004693409.1 123840 D 261292 CDS YP_004693410.1 339481624 10932176 125031..126212 1 NC_015731.1 TIGRFAM: Succinyl-CoA synthetase, beta subunit; HAMAP: Succinyl-CoA ligase [ADP-forming] subunit beta; KEGG: nit:NAL212_0421 succinyl-CoA ligase (ADP-forming) subunit beta; PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; Succinyl-CoA ligase (ADP-forming) subunit beta 126212 10932176 Nit79A3_0104 Nitrosomonas sp. Is79A3 Succinyl-CoA ligase (ADP-forming) subunit beta YP_004693410.1 125031 D 261292 CDS YP_004693411.1 339481625 10932177 126222..127109 1 NC_015731.1 KEGG: nit:NAL212_0422 succinyl-CoA synthetase, alpha subunit; TIGRFAM: Succinyl-CoA ligase, alpha subunit; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit alpha 127109 10932177 Nit79A3_0105 Nitrosomonas sp. Is79A3 succinyl-CoA synthetase subunit alpha YP_004693411.1 126222 D 261292 CDS YP_004693412.1 339481626 10932178 127229..127855 1 NC_015731.1 TIGRFAM: Uncharacterised protein family UPF0114, bacteria; HAMAP: Uncharacterised protein family UPF0114, gammaproteobacteria; KEGG: nit:NAL212_0425 hypothetical protein; PFAM: Uncharacterised protein family UPF0114, prokaryotic; hypothetical protein 127855 10932178 Nit79A3_0106 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693412.1 127229 D 261292 CDS YP_004693413.1 339481627 10932179 complement(127873..128403) 1 NC_015731.1 KEGG: nit:NAL212_0427 CinA domain-containing protein; TIGRFAM: CinA, C-terminal; PFAM: CinA, C-terminal; CinA domain-containing protein 128403 10932179 Nit79A3_0107 Nitrosomonas sp. Is79A3 CinA domain-containing protein YP_004693413.1 127873 R 261292 CDS YP_004693414.1 339481628 10932180 128539..129651 1 NC_015731.1 PFAM: Acyltransferase 3; KEGG: mms:mma_0056 hypothetical protein; acyltransferase 129651 10932180 Nit79A3_0108 Nitrosomonas sp. Is79A3 acyltransferase YP_004693414.1 128539 D 261292 CDS YP_004693415.1 339481629 10932181 129797..130330 1 NC_015731.1 KEGG: mpt:Mpe_A2251 hypothetical protein; hypothetical protein 130330 10932181 Nit79A3_0109 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693415.1 129797 D 261292 CDS YP_004693416.1 339481630 10932182 complement(130375..131199) 1 NC_015731.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: nit:NAL212_0428 hypothetical protein; alpha/beta hydrolase 131199 10932182 Nit79A3_0110 Nitrosomonas sp. Is79A3 alpha/beta hydrolase YP_004693416.1 130375 R 261292 CDS YP_004693417.1 339481631 10932183 complement(131210..131752) 1 NC_015731.1 PFAM: Protein of unknown function DUF2141; KEGG: nit:NAL212_0429 hypothetical protein; hypothetical protein 131752 10932183 Nit79A3_0111 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693417.1 131210 R 261292 CDS YP_004693418.1 339481632 10932184 131819..133885 1 NC_015731.1 PFAM: DNA methylase, adenine-specific; KEGG: slt:Slit_2437 N-6 DNA methylase; N-6 DNA methylase 133885 10932184 Nit79A3_0112 Nitrosomonas sp. Is79A3 N-6 DNA methylase YP_004693418.1 131819 D 261292 CDS YP_004693419.1 339481633 10932185 133885..135090 1 NC_015731.1 PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: gfo:GFO_2591 type I restriction-modification system DNA specificity subunit; restriction modification system DNA specificity domain-containing protein 135090 10932185 Nit79A3_0113 Nitrosomonas sp. Is79A3 restriction modification system DNA specificity domain-containing protein YP_004693419.1 133885 D 261292 CDS YP_004693420.1 339481634 10932186 complement(135110..135532) 1 NC_015731.1 PFAM: PilT protein, N-terminal; KEGG: nit:NAL212_0432 PilT protein domain-containing protein; twitching motility protein PilT 135532 10932186 Nit79A3_0114 Nitrosomonas sp. Is79A3 twitching motility protein PilT YP_004693420.1 135110 R 261292 CDS YP_004693421.1 339481635 10932187 complement(135529..135780) 1 NC_015731.1 TIGRFAM: Prevent-host-death protein; KEGG: nit:NAL212_0433 prevent-host-death family protein; prevent-host-death family protein 135780 10932187 Nit79A3_0115 Nitrosomonas sp. Is79A3 prevent-host-death family protein YP_004693421.1 135529 R 261292 CDS YP_004693422.1 339481636 10932188 135915..137048 1 NC_015731.1 PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: cch:Cag_2003 fic family protein; Fic family protein 137048 10932188 Nit79A3_0116 Nitrosomonas sp. Is79A3 Fic family protein YP_004693422.1 135915 D 261292 CDS YP_004693423.1 339481637 10932189 137121..140348 1 NC_015731.1 TIGRFAM: Restriction endonuclease, type I, EcoRI, R subunit; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: nit:NAL212_0436 type I site-specific deoxyribonuclease, HsdR family; SMART: DEAD-like helicase, N-terminal; type I site-specific deoxyribonuclease, HsdR family 140348 10932189 Nit79A3_0117 Nitrosomonas sp. Is79A3 type I site-specific deoxyribonuclease, HsdR family YP_004693423.1 137121 D 261292 CDS YP_004693424.1 339481638 10932190 complement(140366..141502) 1 NC_015731.1 KEGG: nit:NAL212_2929 twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; twitching motility protein 141502 10932190 Nit79A3_0118 Nitrosomonas sp. Is79A3 twitching motility protein YP_004693424.1 140366 R 261292 CDS YP_004693425.1 339481639 10932191 complement(141536..142579) 1 NC_015731.1 TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: nit:NAL212_2928 twitching motility protein; SMART: ATPase, AAA+ type, core; twitching motility protein 142579 10932191 Nit79A3_0119 Nitrosomonas sp. Is79A3 twitching motility protein YP_004693425.1 141536 R 261292 CDS YP_004693426.1 339481640 10932192 complement(142809..144053) 1 NC_015731.1 PFAM: Diguanylate phosphodiesterase, predicted; Metal-dependent hydrolase HDOD; KEGG: nit:NAL212_0455 diguanylate phosphodiesterase metal dependent hydrolase domain; diguanylate phosphodiesterase with metal dependent hydrolase domain 144053 10932192 Nit79A3_0120 Nitrosomonas sp. Is79A3 diguanylate phosphodiesterase with metal dependent hydrolase domain YP_004693426.1 142809 R 261292 CDS YP_004693427.1 339481641 10932193 complement(144290..145201) 1 NC_015731.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: nit:NAL212_0454 metal dependent phosphohydrolase; signal transduction protein 145201 10932193 Nit79A3_0121 Nitrosomonas sp. Is79A3 signal transduction protein YP_004693427.1 144290 R 261292 CDS YP_004693428.1 339481642 10932194 complement(145393..145644) 1 NC_015731.1 PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: nit:NAL212_0453 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 145644 10932194 Nit79A3_0122 Nitrosomonas sp. Is79A3 4Fe-4S ferredoxin YP_004693428.1 145393 R 261292 CDS YP_004693429.1 339481643 10932195 complement(145658..146137) 1 NC_015731.1 TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; HAMAP: Coenzyme A biosynthesis protein; KEGG: nit:NAL212_0452 pantetheine-phosphate adenylyltransferase; PFAM: Cytidylyltransferase; Phosphopantetheine adenylyltransferase 146137 10932195 Nit79A3_0123 Nitrosomonas sp. Is79A3 Phosphopantetheine adenylyltransferase YP_004693429.1 145658 R 261292 CDS YP_004693430.1 339481644 10932196 complement(146130..146684) 1 NC_015731.1 KEGG: nit:NAL212_0451 methyltransferase; TIGRFAM: Conserved hypothetical protein CHP00095; PFAM: Protein of unknown function methylase; methyltransferase 146684 10932196 Nit79A3_0124 Nitrosomonas sp. Is79A3 methyltransferase YP_004693430.1 146130 R 261292 CDS YP_004693431.1 339481645 10932197 complement(146696..148000) 1 NC_015731.1 PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: nit:NAL212_0450 peptidase M16 domain-containing protein; peptidase M16 domain-containing protein 148000 10932197 Nit79A3_0125 Nitrosomonas sp. Is79A3 peptidase M16 domain-containing protein YP_004693431.1 146696 R 261292 CDS YP_004693432.1 339481646 10932198 complement(148044..150839) 1 NC_015731.1 KEGG: nit:NAL212_0449 phosphoenolpyruvate carboxylase; HAMAP: Phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase; Phosphoenolpyruvate carboxylase 150839 10932198 Nit79A3_0126 Nitrosomonas sp. Is79A3 Phosphoenolpyruvate carboxylase YP_004693432.1 148044 R 261292 CDS YP_004693433.1 339481647 10932199 150962..151918 1 NC_015731.1 TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: nit:NAL212_0448 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; porphobilinogen deaminase 151918 10932199 Nit79A3_0127 Nitrosomonas sp. Is79A3 porphobilinogen deaminase YP_004693433.1 150962 D 261292 CDS YP_004693434.1 339481648 10932200 151921..152715 1 NC_015731.1 PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; KEGG: nit:NAL212_0447 uroporphyrinogen III synthase HEM4; Uroporphyrinogen III synthase HEM4 152715 10932200 Nit79A3_0128 Nitrosomonas sp. Is79A3 Uroporphyrinogen III synthase HEM4 YP_004693434.1 151921 D 261292 CDS YP_004693435.1 339481649 10932201 152858..154033 1 NC_015731.1 PFAM: HemY, N-terminal; KEGG: nit:NAL212_0446 HemY domain-containing protein; HemY domain-containing protein 154033 10932201 Nit79A3_0129 Nitrosomonas sp. Is79A3 HemY domain-containing protein YP_004693435.1 152858 D 261292 CDS YP_004693436.1 339481650 10932202 complement(154039..155094) 1 NC_015731.1 PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; Ferredoxin; KEGG: nit:NAL212_0445 ferredoxin--NAD(+) reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein 155094 10932202 Nit79A3_0130 Nitrosomonas sp. Is79A3 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_004693436.1 154039 R 261292 CDS YP_004693437.1 339481651 10932203 155142..156038 1 NC_015731.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: nit:NAL212_0444 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 156038 10932203 Nit79A3_0131 Nitrosomonas sp. Is79A3 NAD-dependent epimerase/dehydratase YP_004693437.1 155142 D 261292 CDS YP_004693438.1 339481652 10932204 156225..157448 1 NC_015731.1 PFAM: Type II secretion system F domain; KEGG: nit:NAL212_0443 type II secretion system F domain; Type II secretion system F domain-containing protein 157448 10932204 Nit79A3_0132 Nitrosomonas sp. Is79A3 Type II secretion system F domain-containing protein YP_004693438.1 156225 D 261292 CDS YP_004693439.1 339481653 10932205 157502..158347 1 NC_015731.1 PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV; KEGG: nit:NAL212_0442 prepilin peptidase; peptidase A24A domain-containing protein 158347 10932205 Nit79A3_0133 Nitrosomonas sp. Is79A3 peptidase A24A domain-containing protein YP_004693439.1 157502 D 261292 CDS YP_004693440.1 339481654 10932206 158351..158971 1 NC_015731.1 KEGG: nit:NAL212_0441 dephospho-CoA kinase; TIGRFAM: Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; Dephospho-CoA kinase 158971 10932206 Nit79A3_0134 Nitrosomonas sp. Is79A3 Dephospho-CoA kinase YP_004693440.1 158351 D 261292 CDS YP_004693441.1 339481655 10932207 159073..159828 1 NC_015731.1 KEGG: nit:NAL212_0440 hypothetical protein; HAMAP: UPF0289 protein yacF; PFAM: Protein of unknown function DUF1342; hypothetical protein 159828 10932207 Nit79A3_0135 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693441.1 159073 D 261292 CDS YP_004693442.1 339481656 10932208 complement(160018..162591) 1 NC_015731.1 KEGG: nit:NAL212_0456 cyanophycin synthetase; TIGRFAM: Cyanophycin synthetase; PFAM: Mur ligase, central; ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; Mur ligase, C-terminal; cyanophycin synthetase 162591 10932208 Nit79A3_0136 Nitrosomonas sp. Is79A3 cyanophycin synthetase YP_004693442.1 160018 R 261292 CDS YP_004693443.1 339481657 10932209 complement(162588..164918) 1 NC_015731.1 KEGG: nit:NAL212_0457 cyanophycin synthetase; TIGRFAM: Cyanophycin synthetase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Mur ligase, central; cyanophycin synthetase 164918 10932209 Nit79A3_0137 Nitrosomonas sp. Is79A3 cyanophycin synthetase YP_004693443.1 162588 R 261292 CDS YP_004693444.1 339481658 10932210 165223..166287 1 NC_015731.1 PFAM: Integrase, catalytic core; KEGG: ppu:PP_4459 transposase; Integrase catalytic subunit 166287 10932210 Nit79A3_0138 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004693444.1 165223 D 261292 CDS YP_004693445.1 339481659 10932211 166510..167793 1 NC_015731.1 PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; KEGG: nit:NAL212_0458 hypothetical protein; hypothetical protein 167793 10932211 Nit79A3_0139 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693445.1 166510 D 261292 CDS YP_004693446.1 339481660 10932213 168203..168802 1 NC_015731.1 KEGG: nit:NAL212_0462 riboflavin synthase, alpha subunit; TIGRFAM: Lumazine-binding protein; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha 168802 10932213 Nit79A3_0140 Nitrosomonas sp. Is79A3 riboflavin synthase subunit alpha YP_004693446.1 168203 D 261292 CDS YP_004693447.1 339481661 10932214 168825..169925 1 NC_015731.1 TIGRFAM: DHBP synthase RibB; HAMAP: 3,4-dihydroxy-2-butanone 4-phosphate synthase; KEGG: nit:NAL212_0463 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: DHBP synthase RibB; GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 169925 10932214 Nit79A3_0141 Nitrosomonas sp. Is79A3 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_004693447.1 168825 D 261292 CDS YP_004693448.1 339481662 10932215 169989..170471 1 NC_015731.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: nit:NAL212_0464 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 170471 10932215 Nit79A3_0142 Nitrosomonas sp. Is79A3 6,7-dimethyl-8-ribityllumazine synthase YP_004693448.1 169989 D 261292 CDS YP_004693449.1 339481663 10932216 170468..170968 1 NC_015731.1 TIGRFAM: NusB antitermination factor; HAMAP: N utilization substance protein B-like protein; KEGG: nit:NAL212_0465 NusB antitermination factor; PFAM: NusB/RsmB/TIM44; NusB antitermination factor 170968 10932216 Nit79A3_0143 Nitrosomonas sp. Is79A3 NusB antitermination factor YP_004693449.1 170468 D 261292 CDS YP_004693450.1 339481664 10932217 170981..171952 1 NC_015731.1 KEGG: nit:NAL212_0466 thiamine-monophosphate kinase; TIGRFAM: Thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; thiamine-monophosphate kinase 171952 10932217 Nit79A3_0144 Nitrosomonas sp. Is79A3 thiamine-monophosphate kinase YP_004693450.1 170981 D 261292 CDS YP_004693451.1 339481665 10932218 171933..172481 1 NC_015731.1 PFAM: Phosphatidylglycerophosphatase A; KEGG: nit:NAL212_0467 phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 172481 10932218 Nit79A3_0145 Nitrosomonas sp. Is79A3 phosphatidylglycerophosphatase A YP_004693451.1 171933 D 261292 CDS YP_004693452.1 339481666 10932219 complement(172511..172711) 1 NC_015731.1 PFAM: Protein of unknown function DUF466; KEGG: nit:NAL212_0284 hypothetical protein; hypothetical protein 172711 10932219 Nit79A3_0146 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693452.1 172511 R 261292 CDS YP_004693453.1 339481667 10932220 complement(172730..174802) 1 NC_015731.1 PFAM: Carbon starvation protein CstA; KEGG: nit:NAL212_0285 carbon starvation protein CstA; carbon starvation protein CstA 174802 10932220 Nit79A3_0147 Nitrosomonas sp. Is79A3 carbon starvation protein CstA YP_004693453.1 172730 R 261292 CDS YP_004693454.1 339481668 10932221 complement(174854..176236) 1 NC_015731.1 KEGG: nit:NAL212_0468 anion transporter; TIGRFAM: Sodium/sulphate symporter; PFAM: Sodium/sulphate symporter; anion transporter 176236 10932221 Nit79A3_0148 Nitrosomonas sp. Is79A3 anion transporter YP_004693454.1 174854 R 261292 CDS YP_004693455.1 339481669 10932222 complement(176626..178128) 1 NC_015731.1 KEGG: nit:NAL212_0653 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; PAS fold-4; SMART: Diguanylate phosphodiesterase, predicted; diguanylate phosphodiesterase 178128 10932222 Nit79A3_0149 Nitrosomonas sp. Is79A3 diguanylate phosphodiesterase YP_004693455.1 176626 R 261292 CDS YP_004693456.1 339481670 10932223 complement(178147..179190) 1 NC_015731.1 PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; KEGG: nit:NAL212_0654 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 179190 10932223 Nit79A3_0150 Nitrosomonas sp. Is79A3 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_004693456.1 178147 R 261292 CDS YP_004693457.1 339481671 10932224 179522..180769 1 NC_015731.1 KEGG: nit:NAL212_0655 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: Isocitrate dehydrogenase NADP-dependent, prokaryotic; PFAM: Isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase, NADP-dependent 180769 10932224 Nit79A3_0151 Nitrosomonas sp. Is79A3 isocitrate dehydrogenase, NADP-dependent YP_004693457.1 179522 D 261292 CDS YP_004693458.1 339481672 10932225 complement(180983..181186) 1 NC_015731.1 KEGG: nmu:Nmul_A2246 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 181186 10932225 Nit79A3_0152 Nitrosomonas sp. Is79A3 cold-shock DNA-binding domain-containing protein YP_004693458.1 180983 R 261292 CDS YP_004693459.1 339481673 10932226 181475..181783 1 NC_015731.1 KEGG: nit:NAL212_0658 ATP-dependent Clp protease adaptor protein ClpS; HAMAP: ATP-dependent Clp protease adapter protein clpS; PFAM: Adaptor protein ClpS, core; ATP-dependent Clp protease adapter protein clpS 181783 10932226 Nit79A3_0153 Nitrosomonas sp. Is79A3 ATP-dependent Clp protease adapter protein clpS YP_004693459.1 181475 D 261292 CDS YP_004693460.1 339481674 10932227 181785..184043 1 NC_015731.1 TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: nit:NAL212_0659 ATP-dependent Clp protease, ATP-binding subunit ClpA; SMART: ATPase, AAA+ type, core; ATP-dependent Clp protease ATP-binding subunit ClpA 184043 10932227 Nit79A3_0154 Nitrosomonas sp. Is79A3 ATP-dependent Clp protease ATP-binding subunit ClpA YP_004693460.1 181785 D 261292 CDS YP_004693461.1 339481675 10932228 184275..185627 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: tin:Tint_1940 transposase IS4 family protein; transposase IS4 family protein 185627 10932228 Nit79A3_0155 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004693461.1 184275 D 261292 CDS YP_004693462.1 339481676 10932229 complement(185893..187191) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: afe:Lferr_1749 hypothetical protein; transposase IS4 family protein 187191 10932229 Nit79A3_0156 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004693462.1 185893 R 261292 CDS YP_004693463.1 339481677 10932230 complement(187145..187528) 1 NC_015731.1 KEGG: afr:AFE_2095 hypothetical protein; hypothetical protein 187528 10932230 Nit79A3_0157 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693463.1 187145 R 261292 CDS YP_004693464.1 339481678 10932231 complement(187521..188912) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: gur:Gura_1234 hypothetical protein; transposase IS4 family protein 188912 10932231 Nit79A3_0158 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004693464.1 187521 R 261292 CDS YP_004693465.1 339481679 10932232 complement(189146..190108) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 190108 10932232 Nit79A3_0159 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004693465.1 189146 R 261292 CDS YP_004693466.1 339481680 10932233 complement(190603..190806) 1 NC_015731.1 hypothetical protein 190806 10932233 Nit79A3_0160 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693466.1 190603 R 261292 CDS YP_004693467.1 339481681 10932234 191068..192315 1 NC_015731.1 PFAM: Serine hydroxymethyltransferase; KEGG: nit:NAL212_2908 glycine hydroxymethyltransferase; glycine hydroxymethyltransferase 192315 10932234 Nit79A3_0161 Nitrosomonas sp. Is79A3 glycine hydroxymethyltransferase YP_004693467.1 191068 D 261292 CDS YP_004693468.1 339481682 10932235 192382..192840 1 NC_015731.1 TIGRFAM: Ribonucleotide reductase regulator NrdR-like; HAMAP: Transcriptional repressor nrdR; KEGG: nit:NAL212_2907 ribonucleotide reductase regulator NrdR-like protein; PFAM: ATP-cone; Transcriptional repressor nrdR 192840 10932235 Nit79A3_0162 Nitrosomonas sp. Is79A3 Transcriptional repressor nrdR YP_004693468.1 192382 D 261292 CDS YP_004693469.1 339481683 10932236 192949..194040 1 NC_015731.1 TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: nit:NAL212_2906 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding; riboflavin biosynthesis protein RibD 194040 10932236 Nit79A3_0163 Nitrosomonas sp. Is79A3 riboflavin biosynthesis protein RibD YP_004693469.1 192949 D 261292 CDS YP_004693470.1 339481684 10932237 complement(194052..194612) 1 NC_015731.1 KEGG: nit:NAL212_2905 two component transcriptional regulator, Fis family; PFAM: Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; Fis family transcriptional regulator 194612 10932237 Nit79A3_0164 Nitrosomonas sp. Is79A3 Fis family transcriptional regulator YP_004693470.1 194052 R 261292 CDS YP_004693471.1 339481685 10932238 complement(194618..195877) 1 NC_015731.1 KEGG: nit:NAL212_2904 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 195877 10932238 Nit79A3_0165 Nitrosomonas sp. Is79A3 integral membrane sensor signal transduction histidine kinase YP_004693471.1 194618 R 261292 CDS YP_004693472.1 339481686 10932239 196208..197326 1 NC_015731.1 PFAM: DAHP synthetase I/KDSA; KEGG: nit:NAL212_2903 3-deoxy-7-phosphoheptulonate synthase; DAHP synthetase I/KDSA 197326 10932239 Nit79A3_0166 Nitrosomonas sp. Is79A3 DAHP synthetase I/KDSA YP_004693472.1 196208 D 261292 CDS YP_004693473.1 339481687 10932240 197429..198373 1 NC_015731.1 TIGRFAM: LytB protein; HAMAP: LytB protein; KEGG: nit:NAL212_2902 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 198373 10932240 Nit79A3_0167 Nitrosomonas sp. Is79A3 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_004693473.1 197429 D 261292 CDS YP_004693474.1 339481688 10932241 complement(198359..199486) 1 NC_015731.1 KEGG: nit:NAL212_2901 glycine oxidase ThiO; TIGRFAM: Glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; glycine oxidase ThiO 199486 10932241 Nit79A3_0168 Nitrosomonas sp. Is79A3 glycine oxidase ThiO YP_004693474.1 198359 R 261292 CDS YP_004693475.1 339481689 10932242 199750..200274 1 NC_015731.1 KEGG: nit:NAL212_2900 general secretion pathway, GspH; general secretion pathway, GspH 200274 10932242 Nit79A3_0169 Nitrosomonas sp. Is79A3 general secretion pathway, GspH YP_004693475.1 199750 D 261292 CDS YP_004693476.1 339481690 10932243 200268..200780 1 NC_015731.1 TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG: nit:NAL212_2899 type IV pilus modification protein PilV; type IV pilus modification protein PilV 200780 10932243 Nit79A3_0170 Nitrosomonas sp. Is79A3 type IV pilus modification protein PilV YP_004693476.1 200268 D 261292 CDS YP_004693477.1 339481691 10932244 200817..201575 1 NC_015731.1 KEGG: nit:NAL212_2898 Tfp pilus assembly protein PilW; Tfp pilus assembly protein PilW 201575 10932244 Nit79A3_0171 Nitrosomonas sp. Is79A3 Tfp pilus assembly protein PilW YP_004693477.1 200817 D 261292 CDS YP_004693478.1 339481692 10932245 201572..202141 1 NC_015731.1 KEGG: nit:NAL212_2897 hypothetical protein; hypothetical protein 202141 10932245 Nit79A3_0172 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693478.1 201572 D 261292 CDS YP_004693479.1 339481693 10932246 202176..205688 1 NC_015731.1 PFAM: Neisseria PilC; KEGG: nit:NAL212_2896 PilC domain-containing protein; Neisseria PilC domain-containing protein 205688 10932246 Nit79A3_0173 Nitrosomonas sp. Is79A3 Neisseria PilC domain-containing protein YP_004693479.1 202176 D 261292 CDS YP_004693480.1 339481694 10932247 205795..206253 1 NC_015731.1 KEGG: nit:NAL212_2895 fimbrial protein pilin; fimbrial protein pilin 206253 10932247 Nit79A3_0174 Nitrosomonas sp. Is79A3 fimbrial protein pilin YP_004693480.1 205795 D 261292 CDS YP_004693481.1 339481695 10932248 complement(206288..206995) 1 NC_015731.1 KEGG: nit:NAL212_0182 phosphate uptake regulator, PhoU; TIGRFAM: PhoU; PFAM: PhoU; phosphate uptake regulator PhoU 206995 10932248 Nit79A3_0175 Nitrosomonas sp. Is79A3 phosphate uptake regulator PhoU YP_004693481.1 206288 R 261292 CDS YP_004693482.1 339481696 10932249 complement(207067..207726) 1 NC_015731.1 TIGRFAM: Ribose 5-phosphate isomerase; HAMAP: Ribose-5-phosphate isomerase, subgroup; KEGG: nit:NAL212_0183 ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; Ribose-5-phosphate isomerase A 207726 10932249 Nit79A3_0176 Nitrosomonas sp. Is79A3 Ribose-5-phosphate isomerase A YP_004693482.1 207067 R 261292 CDS YP_004693483.1 339481697 10932250 208055..209359 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 209359 10932250 Nit79A3_0177 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004693483.1 208055 D 261292 CDS YP_004693484.1 339481698 10932251 complement(209532..210644) 1 NC_015731.1 KEGG: rpf:Rpic12D_1515 heat shock protein DnaJ domain-containing protein; molecular chaperone DnaJ 210644 10932251 Nit79A3_0178 Nitrosomonas sp. Is79A3 molecular chaperone DnaJ YP_004693484.1 209532 R 261292 CDS YP_004693485.1 339481699 10932252 complement(210854..211219) 1 NC_015731.1 PFAM: Protein of unknown function DUF1486; KEGG: nit:NAL212_0470 hypothetical protein; hypothetical protein 211219 10932252 Nit79A3_0179 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693485.1 210854 R 261292 CDS YP_004693486.1 339481700 10932253 complement(211262..212044) 1 NC_015731.1 KEGG: nit:NAL212_0471 hypothetical protein; HAMAP: UPF0246 protein yaaA; PFAM: Protein of unknown function DUF328; hypothetical protein 212044 10932253 Nit79A3_0180 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693486.1 211262 R 261292 CDS YP_004693487.1 339481701 10932254 212187..213353 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: cph:Cpha266_2339 transposase, IS4 family protein; transposase IS4 family protein 213353 10932254 Nit79A3_0181 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004693487.1 212187 D 261292 CDS YP_004693488.1 339481702 10932255 213670..215160 1 NC_015731.1 TIGRFAM: Peptidase S1C, Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; KEGG: nhl:Nhal_1160 protease Do; SMART: PDZ/DHR/GLGF; protease Do 215160 10932255 Nit79A3_0182 Nitrosomonas sp. Is79A3 protease Do YP_004693488.1 213670 D 261292 CDS YP_004693489.1 339481703 10932256 215376..216551 1 NC_015731.1 KEGG: nit:NAL212_0594 amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; amidohydrolase 216551 10932256 Nit79A3_0183 Nitrosomonas sp. Is79A3 amidohydrolase YP_004693489.1 215376 D 261292 CDS YP_004693490.1 339481704 10932257 216701..216949 1 NC_015731.1 TIGRFAM: Prevent-host-death protein; KEGG: nit:NAL212_0596 prevent-host-death family protein; prevent-host-death family protein 216949 10932257 Nit79A3_0184 Nitrosomonas sp. Is79A3 prevent-host-death family protein YP_004693490.1 216701 D 261292 CDS YP_004693491.1 339481705 10932258 216939..217235 1 NC_015731.1 KEGG: neu:NE1584 hypothetical protein; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system; RelE/StbE family addiction module toxin 217235 10932258 Nit79A3_0185 Nitrosomonas sp. Is79A3 RelE/StbE family addiction module toxin YP_004693491.1 216939 D 261292 CDS YP_004693492.1 339481706 10932259 complement(217434..217679) 1 NC_015731.1 KEGG: ava:Ava_0768 hypothetical protein; hypothetical protein 217679 10932259 Nit79A3_0186 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693492.1 217434 R 261292 CDS YP_004693493.1 339481707 10932260 complement(217666..217938) 1 NC_015731.1 PFAM: Protein of unknown function DUF497; KEGG: cyc:PCC7424_5048 protein of unknown function DUF497; hypothetical protein 217938 10932260 Nit79A3_0187 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693493.1 217666 R 261292 CDS YP_004693494.1 339481708 10932261 complement(217998..218120) 1 NC_015731.1 hypothetical protein 218120 10932261 Nit79A3_0188 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693494.1 217998 R 261292 CDS YP_004693495.1 339481709 10932262 complement(218120..218314) 1 NC_015731.1 PFAM: Protein of unknown function DUF2191; KEGG: nhl:Nhal_3638 hypothetical protein; hypothetical protein 218314 10932262 Nit79A3_0189 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693495.1 218120 R 261292 CDS YP_004693496.1 339481710 10932263 complement(218524..219729) 1 NC_015731.1 KEGG: ccs:CCNA_01861 hypothetical protein; hypothetical protein 219729 10932263 Nit79A3_0190 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693496.1 218524 R 261292 CDS YP_004693497.1 339481711 10932264 complement(219829..223290) 1 NC_015731.1 TIGRFAM: Transcription-repair coupling factor; PFAM: Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Transcription-repair-coupling factor; KEGG: nit:NAL212_0605 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; transcription-repair coupling factor 223290 10932264 Nit79A3_0191 Nitrosomonas sp. Is79A3 transcription-repair coupling factor YP_004693497.1 219829 R 261292 CDS YP_004693498.1 339481712 10932265 223559..224392 1 NC_015731.1 KEGG: nit:NAL212_0606 hypothetical protein; hypothetical protein 224392 10932265 Nit79A3_0192 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693498.1 223559 D 261292 CDS YP_004693499.1 339481713 10932266 224513..225112 1 NC_015731.1 PFAM: Phosphoglycerate mutase; KEGG: nit:NAL212_0607 phosphoglycerate mutase; Phosphoglycerate mutase 225112 10932266 Nit79A3_0193 Nitrosomonas sp. Is79A3 Phosphoglycerate mutase YP_004693499.1 224513 D 261292 CDS YP_004693500.1 339481714 10932267 225303..225548 1 NC_015731.1 TIGRFAM: Prevent-host-death protein; KEGG: gur:Gura_2397 prevent-host-death family protein; prevent-host-death family protein 225548 10932267 Nit79A3_0194 Nitrosomonas sp. Is79A3 prevent-host-death family protein YP_004693500.1 225303 D 261292 CDS YP_004693501.1 339481715 10932268 225532..225933 1 NC_015731.1 PFAM: PilT protein, N-terminal; KEGG: gur:Gura_2398 PilT domain-containing protein; twitching motility protein PilT 225933 10932268 Nit79A3_0195 Nitrosomonas sp. Is79A3 twitching motility protein PilT YP_004693501.1 225532 D 261292 CDS YP_004693502.1 339481716 10932269 complement(226033..227292) 1 NC_015731.1 PFAM: MgtC/SapB transporter; KEGG: nit:NAL212_0496 MgtC/SapB transporter; MgtC/SapB transporter 227292 10932269 Nit79A3_0196 Nitrosomonas sp. Is79A3 MgtC/SapB transporter YP_004693502.1 226033 R 261292 CDS YP_004693503.1 339481717 10932270 complement(227282..229060) 1 NC_015731.1 KEGG: nit:NAL212_0497 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: Bacterial RecJ exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; single-stranded-DNA-specific exonuclease RecJ 229060 10932270 Nit79A3_0197 Nitrosomonas sp. Is79A3 single-stranded-DNA-specific exonuclease RecJ YP_004693503.1 227282 R 261292 CDS YP_004693504.1 339481718 10932271 complement(229105..229953) 1 NC_015731.1 PFAM: Cystathionine beta-synthase, core; Transporter-associated region; KEGG: nit:NAL212_0498 transporter-associated region; CBS domain containing protein 229953 10932271 Nit79A3_0198 Nitrosomonas sp. Is79A3 CBS domain containing protein YP_004693504.1 229105 R 261292 CDS YP_004693505.1 339481719 10932272 complement(230040..230501) 1 NC_015731.1 TIGRFAM: Uncharacterised protein family UPF0054; HAMAP: Uncharacterised protein family UPF0054; KEGG: nit:NAL212_0499 hypothetical protein; PFAM: Uncharacterised protein family UPF0054; metalloprotease ybeY 230501 10932272 Nit79A3_0199 Nitrosomonas sp. Is79A3 metalloprotease ybeY YP_004693505.1 230040 R 261292 CDS YP_004693506.1 339481720 10932273 complement(230514..231509) 1 NC_015731.1 PFAM: PhoH-like protein; KEGG: nit:NAL212_0500 PhoH family protein; PhoH family protein 231509 10932273 Nit79A3_0200 Nitrosomonas sp. Is79A3 PhoH family protein YP_004693506.1 230514 R 261292 CDS YP_004693507.1 339481721 10932274 complement(231585..232913) 1 NC_015731.1 KEGG: nit:NAL212_0501 (dimethylallyl)adenosine tRNA methylthiotransferase MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; manually curated; TIGRFAM: tRNA-i(6)A37 modification enzyme MiaB; Methylthiotransferase; SMART: Elongator protein 3/MiaB/NifB; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; (dimethylallyl)adenosine tRNA methylthiotransferase 232913 10932274 Nit79A3_0201 Nitrosomonas sp. Is79A3 (dimethylallyl)adenosine tRNA methylthiotransferase YP_004693507.1 231585 R 261292 CDS YP_004693508.1 339481722 10932275 complement(232932..233300) 1 NC_015731.1 KEGG: nit:NAL212_0502 hypothetical protein; hypothetical protein 233300 10932275 Nit79A3_0202 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693508.1 232932 R 261292 CDS YP_004693509.1 339481723 10932276 233652..236465 1 NC_015731.1 KEGG: noc:Noc_1205 hypothetical protein; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SMART: DEAD-like helicase, N-terminal; type III restriction protein res subunit 236465 10932276 Nit79A3_0203 Nitrosomonas sp. Is79A3 type III restriction protein res subunit YP_004693509.1 233652 D 261292 CDS YP_004693510.1 339481724 10932277 236465..238141 1 NC_015731.1 PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: ipo:Ilyop_0907 restriction modification system DNA specificity domain protein; restriction modification system DNA specificity domain-containing protein 238141 10932277 Nit79A3_0204 Nitrosomonas sp. Is79A3 restriction modification system DNA specificity domain-containing protein YP_004693510.1 236465 D 261292 CDS YP_004693511.1 339481725 10932278 238226..238867 1 NC_015731.1 KEGG: app:CAP2UW1_4295 hypothetical protein; hypothetical protein 238867 10932278 Nit79A3_0205 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693511.1 238226 D 261292 CDS YP_004693512.1 339481726 10932279 238883..239941 1 NC_015731.1 KEGG: app:CAP2UW1_4296 Appr-1-p processing domain-containing protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing; Appr-1-p processing domain-containing protein 239941 10932279 Nit79A3_0206 Nitrosomonas sp. Is79A3 Appr-1-p processing domain-containing protein YP_004693512.1 238883 D 261292 CDS YP_004693513.1 339481727 10932280 240256..241737 1 NC_015731.1 PFAM: DNA methylase, adenine-specific; KEGG: noc:Noc_1201 N-6 DNA methylase; N-6 DNA methylase 241737 10932280 Nit79A3_0207 Nitrosomonas sp. Is79A3 N-6 DNA methylase YP_004693513.1 240256 D 261292 CDS YP_004693514.1 339481728 10932281 complement(241883..242254) 1 NC_015731.1 hypothetical protein 242254 10932281 Nit79A3_0208 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693514.1 241883 R 261292 CDS YP_004693515.1 339481729 10932282 complement(242573..243169) 1 NC_015731.1 TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; KEGG: nit:NAL212_3091 hypothetical protein; PEP motif anchor domain-containing protein 243169 10932282 Nit79A3_0209 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004693515.1 242573 R 261292 CDS YP_004693516.1 339481730 10932284 243863..245032 1 NC_015731.1 KEGG: nit:NAL212_0631 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: FAD dependent oxidoreductase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 245032 10932284 Nit79A3_0210 Nitrosomonas sp. Is79A3 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_004693516.1 243863 D 261292 CDS YP_004693517.1 339481731 10932285 245059..245781 1 NC_015731.1 PFAM: Disulphide bond isomerase, DsbC/G, N-terminal; KEGG: nit:NAL212_0630 disulfide bond isomerase, DsbC/G; Disulfide bond isomerase, DsbC/G 245781 10932285 Nit79A3_0211 Nitrosomonas sp. Is79A3 Disulfide bond isomerase, DsbC/G YP_004693517.1 245059 D 261292 CDS YP_004693518.1 339481732 10932286 245922..247556 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: afe:Lferr_1749 hypothetical protein; transposase IS4 family protein 247556 10932286 Nit79A3_0212 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004693518.1 245922 D 261292 CDS YP_004693519.1 339481733 10932287 complement(247572..248774) 1 NC_015731.1 PFAM: MltA; 3D; KEGG: nit:NAL212_0629 MltA domain-containing protein; MltA domain-containing protein 248774 10932287 Nit79A3_0213 Nitrosomonas sp. Is79A3 MltA domain-containing protein YP_004693519.1 247572 R 261292 CDS YP_004693520.1 339481734 10932288 complement(249003..249749) 1 NC_015731.1 KEGG: nit:NAL212_0628 NGG1p interacting factor 3 protein, NIF3; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3; NGG1p interacting factor 3 protein, NIF3 249749 10932288 Nit79A3_0214 Nitrosomonas sp. Is79A3 NGG1p interacting factor 3 protein, NIF3 YP_004693520.1 249003 R 261292 CDS YP_004693521.1 339481735 10932289 249824..250966 1 NC_015731.1 KEGG: nit:NAL212_0627 HtrA2 peptidase; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; peptidase S1 and S6 chymotrypsin/Hap 250966 10932289 Nit79A3_0215 Nitrosomonas sp. Is79A3 peptidase S1 and S6 chymotrypsin/Hap YP_004693521.1 249824 D 261292 CDS YP_004693522.1 339481736 10932290 251007..252659 1 NC_015731.1 KEGG: nit:NAL212_0626 biopterin transport-like protein BT1; biopterin transport-like protein BT1 252659 10932290 Nit79A3_0216 Nitrosomonas sp. Is79A3 biopterin transport-like protein BT1 YP_004693522.1 251007 D 261292 CDS YP_004693523.1 339481737 10932291 252882..253169 1 NC_015731.1 TIGRFAM: Competence protein ComEA, helix-hairpin-helix region; PFAM: Helix-hairpin-helix motif; KEGG: nit:NAL212_0625 competence protein ComEA helix-hairpin-helix repeat-containing protein; SMART: Helix-hairpin-helix DNA-binding motif, class 1; competence protein ComEA helix-hairpin-helix repeat protein 253169 10932291 Nit79A3_0217 Nitrosomonas sp. Is79A3 competence protein ComEA helix-hairpin-helix repeat protein YP_004693523.1 252882 D 261292 CDS YP_004693524.1 339481738 10932292 253300..254187 1 NC_015731.1 KEGG: nit:NAL212_0624 cysteine synthase; TIGRFAM: Cysteine synthase B; Cysteine synthase K/M; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; cysteine synthase B 254187 10932292 Nit79A3_0218 Nitrosomonas sp. Is79A3 cysteine synthase B YP_004693524.1 253300 D 261292 CDS YP_004693525.1 339481739 10932293 254496..254906 1 NC_015731.1 KEGG: nit:NAL212_0623 tol-pal system-associated acyl-CoA thioesterase; TIGRFAM: Tol-Pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily; tol-pal system-associated acyl-CoA thioesterase 254906 10932293 Nit79A3_0219 Nitrosomonas sp. Is79A3 tol-pal system-associated acyl-CoA thioesterase YP_004693525.1 254496 D 261292 CDS YP_004693526.1 339481740 10932294 254903..255583 1 NC_015731.1 KEGG: nit:NAL212_0622 protein TolQ; TIGRFAM: Tol-Pal system, TolQ; PFAM: MotA/TolQ/ExbB proton channel; protein TolQ 255583 10932294 Nit79A3_0220 Nitrosomonas sp. Is79A3 protein TolQ YP_004693526.1 254903 D 261292 CDS YP_004693527.1 339481741 10932295 255603..256016 1 NC_015731.1 KEGG: nit:NAL212_0621 protein TolR; TIGRFAM: Biopolymer transport, TolR; PFAM: Biopolymer transport protein ExbD/TolR; protein TolR 256016 10932295 Nit79A3_0221 Nitrosomonas sp. Is79A3 protein TolR YP_004693527.1 255603 D 261292 CDS YP_004693528.1 339481742 10932296 256027..257067 1 NC_015731.1 TIGRFAM: Tol-Pal system, TolA; KEGG: nit:NAL212_0620 protein TolA; protein TolA 257067 10932296 Nit79A3_0222 Nitrosomonas sp. Is79A3 protein TolA YP_004693528.1 256027 D 261292 CDS YP_004693529.1 339481743 10932297 257064..258413 1 NC_015731.1 TIGRFAM: Tol-Pal system beta propeller repeat-containing protein, TolB; HAMAP: Tol-Pal system beta propeller repeat-containing protein, TolB; KEGG: nit:NAL212_0619 Tol-Pal system beta propeller repeat-containing protein TolB; PFAM: TolB, N-terminal; WD40-like Beta Propeller; Protein tolB 258413 10932297 Nit79A3_0223 Nitrosomonas sp. Is79A3 Protein tolB YP_004693529.1 257064 D 261292 CDS YP_004693530.1 339481744 10932298 258443..258961 1 NC_015731.1 KEGG: nit:NAL212_0618 peptidoglycan-associated lipoprotein; TIGRFAM: Peptidoglycan-associated lipoprotein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; peptidoglycan-associated lipoprotein 258961 10932298 Nit79A3_0224 Nitrosomonas sp. Is79A3 peptidoglycan-associated lipoprotein YP_004693530.1 258443 D 261292 CDS YP_004693531.1 339481745 10932299 258964..259869 1 NC_015731.1 TIGRFAM: Tol-Pal system, YbgF; KEGG: nit:NAL212_0617 tol-pal system protein YbgF; tol-pal system protein YbgF 259869 10932299 Nit79A3_0225 Nitrosomonas sp. Is79A3 tol-pal system protein YbgF YP_004693531.1 258964 D 261292 CDS YP_004693532.1 339481746 10932300 259970..260626 1 NC_015731.1 PFAM: Radical SAM; KEGG: nit:NAL212_0616 radical SAM domain-containing protein; Radical SAM domain-containing protein 260626 10932300 Nit79A3_0226 Nitrosomonas sp. Is79A3 Radical SAM domain-containing protein YP_004693532.1 259970 D 261292 CDS YP_004693533.1 339481747 10932301 260644..261324 1 NC_015731.1 KEGG: nit:NAL212_0615 ExsB protein; TIGRFAM: Exoenzyme S synthesis protein B/queuosine synthesis; PFAM: Queuosine synthesis-like; exoenzyme S synthesis protein B 261324 10932301 Nit79A3_0227 Nitrosomonas sp. Is79A3 exoenzyme S synthesis protein B YP_004693533.1 260644 D 261292 CDS YP_004693534.1 339481748 10932302 262073..262501 1 NC_015731.1 KEGG: nit:NAL212_3147 ferric uptake regulator, Fur family; Fur family ferric uptake regulator 262501 10932302 Nit79A3_0228 Nitrosomonas sp. Is79A3 Fur family ferric uptake regulator YP_004693534.1 262073 D 261292 CDS YP_004693535.1 339481749 10932303 262571..262894 1 NC_015731.1 KEGG: nit:NAL212_3148 hypothetical protein; hypothetical protein 262894 10932303 Nit79A3_0229 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693535.1 262571 D 261292 CDS YP_004693536.1 339481750 10932304 263018..265069 1 NC_015731.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: nit:NAL212_3150 TonB-dependent receptor; TonB-dependent receptor 265069 10932304 Nit79A3_0230 Nitrosomonas sp. Is79A3 TonB-dependent receptor YP_004693536.1 263018 D 261292 CDS YP_004693537.1 339481751 10932305 265184..267445 1 NC_015731.1 KEGG: nit:NAL212_2874 adenylate/guanylate cyclase with CHASE sensor; PFAM: CHASE2; Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; guanylate cyclase 267445 10932305 Nit79A3_0231 Nitrosomonas sp. Is79A3 guanylate cyclase YP_004693537.1 265184 D 261292 CDS YP_004693538.1 339481752 10932306 267763..271128 1 NC_015731.1 PFAM: TonB-dependent receptor, beta-barrel; FecR protein; Tetratricopeptide TPR-1; KEGG: nit:NAL212_2875 FecR protein; TonB-dependent receptor 271128 10932306 Nit79A3_0232 Nitrosomonas sp. Is79A3 TonB-dependent receptor YP_004693538.1 267763 D 261292 CDS YP_004693539.1 339481753 10932307 271142..271468 1 NC_015731.1 hypothetical protein 271468 10932307 Nit79A3_0233 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693539.1 271142 D 261292 CDS YP_004693540.1 339481754 10932308 complement(271653..273710) 1 NC_015731.1 TIGRFAM: Inorganic H+ pyrophosphatase; HAMAP: Pyrophosphate-energized proton pump; KEGG: nit:NAL212_2938 V-type H(+)-translocating pyrophosphatase; PFAM: Inorganic H+ pyrophosphatase; Pyrophosphate-energized proton pump 273710 10932308 Nit79A3_0234 Nitrosomonas sp. Is79A3 Pyrophosphate-energized proton pump YP_004693540.1 271653 R 261292 CDS YP_004693541.1 339481755 10932309 complement(273944..275203) 1 NC_015731.1 PFAM: Phosphofructokinase; KEGG: nit:NAL212_2937 phosphofructokinase; phosphofructokinase 275203 10932309 Nit79A3_0235 Nitrosomonas sp. Is79A3 phosphofructokinase YP_004693541.1 273944 R 261292 CDS YP_004693542.1 339481756 10932310 complement(275352..276011) 1 NC_015731.1 PFAM: Adenylate kinase; Adenylate kinase, zinc-finger lid region; manually curated; TIGRFAM: Adenylate kinase, subfamily; KEGG: nit:NAL212_2936 adenylate kinase; HAMAP: Adenylate kinase; adenylate kinase 276011 10932310 Nit79A3_0236 Nitrosomonas sp. Is79A3 adenylate kinase YP_004693542.1 275352 R 261292 CDS YP_004693543.1 339481757 10932311 276222..277286 1 NC_015731.1 SMART: ATPase, AAA+ type, core; TIGRFAM: DNA recombination and repair protein RecA; KEGG: nit:NAL212_2935 RecA protein; HAMAP: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA; recombinase A 277286 10932311 Nit79A3_0237 Nitrosomonas sp. Is79A3 recombinase A YP_004693543.1 276222 D 261292 CDS YP_004693544.1 339481758 10932312 277292..277750 1 NC_015731.1 KEGG: nit:NAL212_2934 regulatory protein RecX; HAMAP: Regulatory protein recX; PFAM: Regulatory protein RecX; Regulatory protein recX 277750 10932312 Nit79A3_0238 Nitrosomonas sp. Is79A3 Regulatory protein recX YP_004693544.1 277292 D 261292 CDS YP_004693545.1 339481759 10932313 277747..278112 1 NC_015731.1 KEGG: nit:NAL212_2933 hypothetical protein; hypothetical protein 278112 10932313 Nit79A3_0239 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693545.1 277747 D 261292 CDS YP_004693546.1 339481760 10932314 278109..280706 1 NC_015731.1 KEGG: nit:NAL212_2932 alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1; alanyl-tRNA synthetase 280706 10932314 Nit79A3_0240 Nitrosomonas sp. Is79A3 alanyl-tRNA synthetase YP_004693546.1 278109 D 261292 CDS YP_004693547.1 339481761 10932316 284700..285038 1 NC_015731.1 PFAM: Polyketide cyclase/dehydrase; KEGG: mms:mma_1843 hypothetical protein; polyketide cyclase/dehydrase 285038 10932316 Nit79A3_0242 Nitrosomonas sp. Is79A3 polyketide cyclase/dehydrase YP_004693547.1 284700 D 261292 CDS YP_004693548.1 339481762 10932317 285481..286779 1 NC_015731.1 PFAM: Integrase, catalytic core, phage; KEGG: nit:NAL212_3061 integrase; integrase 286779 10932317 Nit79A3_0243 Nitrosomonas sp. Is79A3 integrase YP_004693548.1 285481 D 261292 CDS YP_004693549.1 339481763 10932318 286821..287147 1 NC_015731.1 KEGG: slt:Slit_1766 addiction module killer protein; TIGRFAM: Addiction module killer protein, HI1419; PFAM: Protein of unknown function DUF891; addiction module killer protein 287147 10932318 Nit79A3_0244 Nitrosomonas sp. Is79A3 addiction module killer protein YP_004693549.1 286821 D 261292 CDS YP_004693550.1 339481764 10932319 287144..287446 1 NC_015731.1 TIGRFAM: Addiction module antidote protein, HI1420; KEGG: dma:DMR_p1_00500 hypothetical protein; addiction module antidote protein 287446 10932319 Nit79A3_0245 Nitrosomonas sp. Is79A3 addiction module antidote protein YP_004693550.1 287144 D 261292 CDS YP_004693551.1 339481765 10932320 287493..288179 1 NC_015731.1 hypothetical protein 288179 10932320 Nit79A3_0246 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693551.1 287493 D 261292 CDS YP_004693552.1 339481766 10932321 288315..288539 1 NC_015731.1 KEGG: tin:Tint_1141 hypothetical protein; hypothetical protein 288539 10932321 Nit79A3_0247 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693552.1 288315 D 261292 CDS YP_004693553.1 339481767 10932322 288539..289108 1 NC_015731.1 KEGG: nit:NAL212_3065 hypothetical protein; hypothetical protein 289108 10932322 Nit79A3_0248 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693553.1 288539 D 261292 CDS YP_004693554.1 339481768 10932323 289182..289649 1 NC_015731.1 KEGG: pth:PTH_2877 hypothetical protein; hypothetical protein 289649 10932323 Nit79A3_0249 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693554.1 289182 D 261292 CDS YP_004693555.1 339481769 10932324 289646..290629 1 NC_015731.1 KEGG: wch:wcw_0673 hypothetical protein; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SMART: ATPase, AAA+ type, core; Sigma-70 region 4 type 2 290629 10932324 Nit79A3_0250 Nitrosomonas sp. Is79A3 Sigma-70 region 4 type 2 YP_004693555.1 289646 D 261292 CDS YP_004693556.1 339481770 10932325 290626..291027 1 NC_015731.1 hypothetical protein 291027 10932325 Nit79A3_0251 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693556.1 290626 D 261292 CDS YP_004693557.1 339481771 10932326 291182..291706 1 NC_015731.1 KEGG: nit:NAL212_1959 hypothetical protein; hypothetical protein 291706 10932326 Nit79A3_0252 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693557.1 291182 D 261292 CDS YP_004693558.1 339481772 10932327 291820..292017 1 NC_015731.1 KEGG: nit:NAL212_3072 hypothetical protein; hypothetical protein 292017 10932327 Nit79A3_0253 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693558.1 291820 D 261292 CDS YP_004693559.1 339481773 10932328 complement(292078..292686) 1 NC_015731.1 KEGG: msl:Msil_3100 protein of unknown function DUF955; hypothetical protein 292686 10932328 Nit79A3_0254 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693559.1 292078 R 261292 CDS YP_004693560.1 339481774 10932329 complement(292723..292941) 1 NC_015731.1 hypothetical protein 292941 10932329 Nit79A3_0255 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693560.1 292723 R 261292 CDS YP_004693561.1 339481775 10932331 complement(293504..295744) 1 NC_015731.1 KEGG: nit:NAL212_3075 RNA polymerase, sigma 70 subunit, RpoD; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, non-essential region; RNA polymerase sigma factor 70, region 1.1; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4; RNA polymerase, sigma 70 subunit, RpoD 295744 10932331 Nit79A3_0256 Nitrosomonas sp. Is79A3 RNA polymerase, sigma 70 subunit, RpoD YP_004693561.1 293504 R 261292 CDS YP_004693562.1 339481776 10932332 complement(295833..297632) 1 NC_015731.1 KEGG: nit:NAL212_3076 DNA primase; TIGRFAM: DNA primase, DnaG; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; DNA primase, DnaB-helicase binding domain; DNA primase DnaG, DnaB-binding; DNA primase 297632 10932332 Nit79A3_0257 Nitrosomonas sp. Is79A3 DNA primase YP_004693562.1 295833 R 261292 CDS YP_004693563.1 339481777 10932333 complement(297731..298177) 1 NC_015731.1 KEGG: nit:NAL212_3077 hypothetical protein; hypothetical protein 298177 10932333 Nit79A3_0258 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693563.1 297731 R 261292 CDS YP_004693564.1 339481778 10932334 complement(298277..298489) 1 NC_015731.1 TIGRFAM: Ribosomal protein S21; HAMAP: Ribosomal protein S21; KEGG: nit:NAL212_3078 30S ribosomal protein S21; PFAM: Ribosomal protein S21; 30S ribosomal protein S21 298489 10932334 Nit79A3_0259 Nitrosomonas sp. Is79A3 30S ribosomal protein S21 YP_004693564.1 298277 R 261292 CDS YP_004693565.1 339481779 10932335 299629..299922 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: gca:Galf_0832 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 299922 10932335 Nit79A3_0260 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004693565.1 299629 D 261292 CDS YP_004693566.1 339481780 10932336 299919..300794 1 NC_015731.1 PFAM: Integrase, catalytic core; KEGG: rso:RSp0548 ISRSO8-transposase orfB protein; Integrase catalytic subunit 300794 10932336 Nit79A3_0261 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004693566.1 299919 D 261292 CDS YP_004693567.1 339481781 10932337 301052..301651 1 NC_015731.1 KEGG: lch:Lcho_2324 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 301651 10932337 Nit79A3_0262 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004693567.1 301052 D 261292 CDS YP_004693568.1 339481782 10932338 302183..303424 1 NC_015731.1 PFAM: Integrase, catalytic core, phage; KEGG: nit:NAL212_2454 integrase; integrase 303424 10932338 Nit79A3_0263 Nitrosomonas sp. Is79A3 integrase YP_004693568.1 302183 D 261292 CDS YP_004693569.1 339481783 10932340 303765..304073 1 NC_015731.1 KEGG: nit:NAL212_2452 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 304073 10932340 Nit79A3_0265 Nitrosomonas sp. Is79A3 helix-turn-helix domain-containing protein YP_004693569.1 303765 D 261292 CDS YP_004693570.1 339481784 10932341 304213..304572 1 NC_015731.1 KEGG: nit:NAL212_0371 hypothetical protein; hypothetical protein 304572 10932341 Nit79A3_0266 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693570.1 304213 D 261292 CDS YP_004693571.1 339481785 10932342 complement(304815..305693) 1 NC_015731.1 PFAM: Integrase, catalytic core; KEGG: rso:RSp0548 ISRSO8-transposase orfB protein; Integrase catalytic subunit 305693 10932342 Nit79A3_0267 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004693571.1 304815 R 261292 CDS YP_004693572.1 339481786 10932343 complement(305690..305983) 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: gca:Galf_0832 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 305983 10932343 Nit79A3_0268 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004693572.1 305690 R 261292 CDS YP_004693573.1 339481787 10932344 complement(306179..306640) 1 NC_015731.1 KEGG: nmu:Nmul_A1577 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02284; PFAM: Protein of unknown function DUF2383; hypothetical protein 306640 10932344 Nit79A3_0269 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693573.1 306179 R 261292 CDS YP_004693574.1 339481788 10932345 306852..307049 1 NC_015731.1 hypothetical protein 307049 10932345 Nit79A3_0270 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693574.1 306852 D 261292 CDS YP_004693575.1 339481789 10932347 complement(307742..308065) 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein 308065 10932347 Nit79A3_0272 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004693575.1 307742 R 261292 CDS YP_004693576.1 339481790 10932349 complement(308583..308903) 1 NC_015731.1 PFAM: Plasmid stabilisation system; KEGG: nit:NAL212_3030 plasmid stabilization system; plasmid stabilization system 308903 10932349 Nit79A3_0274 Nitrosomonas sp. Is79A3 plasmid stabilization system YP_004693576.1 308583 R 261292 CDS YP_004693577.1 339481791 10932350 complement(308903..309163) 1 NC_015731.1 KEGG: nit:NAL212_3029 addiction module antidote protein, CC2985 family; TIGRFAM: addiction module antidote protein, CC2985; PFAM: addiction module antidote protein, CC2985; addiction module antidote protein 309163 10932350 Nit79A3_0275 Nitrosomonas sp. Is79A3 addiction module antidote protein YP_004693577.1 308903 R 261292 CDS YP_004693578.1 339481792 10932352 310213..310740 1 NC_015731.1 KEGG: nmu:Nmul_A1247 hypothetical protein; hypothetical protein 310740 10932352 Nit79A3_0277 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693578.1 310213 D 261292 CDS YP_004693579.1 339481793 10932356 complement(312696..312938) 1 NC_015731.1 hypothetical protein 312938 10932356 Nit79A3_0281 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693579.1 312696 R 261292 CDS YP_004693580.1 339481794 10932359 314639..314737 1 NC_015731.1 hypothetical protein 314737 10932359 Nit79A3_0284 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693580.1 314639 D 261292 CDS YP_004693581.1 339481795 10932360 complement(314805..315242) 1 NC_015731.1 KEGG: hil:HICON_17510 hypothetical protein; hypothetical protein 315242 10932360 Nit79A3_0285 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693581.1 314805 R 261292 CDS YP_004693582.1 339481796 10932361 complement(315414..316016) 1 NC_015731.1 PFAM: Sel1-like; KEGG: gur:Gura_1985 Sel1 domain-containing protein; Sel1 domain-containing protein 316016 10932361 Nit79A3_0286 Nitrosomonas sp. Is79A3 Sel1 domain-containing protein YP_004693582.1 315414 R 261292 CDS YP_004693583.1 339481797 10932362 316036..316359 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein 316359 10932362 Nit79A3_0287 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004693583.1 316036 D 261292 CDS YP_004693584.1 339481798 10932363 316356..317264 1 NC_015731.1 KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 317264 10932363 Nit79A3_0288 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004693584.1 316356 D 261292 CDS YP_004693585.1 339481799 10932364 complement(317232..317564) 1 NC_015731.1 KEGG: hiq:CGSHiGG_00130 Sel1 domain-containing protein; PFAM: Sel1-like; SMART: Sel1-like; Sel1 domain-containing protein 317564 10932364 Nit79A3_0289 Nitrosomonas sp. Is79A3 Sel1 domain-containing protein YP_004693585.1 317232 R 261292 CDS YP_004693586.1 339481800 10932365 complement(317904..318104) 1 NC_015731.1 PFAM: Protein of unknown function DUF466; KEGG: nit:NAL212_0284 hypothetical protein; hypothetical protein 318104 10932365 Nit79A3_0290 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693586.1 317904 R 261292 CDS YP_004693587.1 339481801 10932366 complement(318153..320192) 1 NC_015731.1 PFAM: Carbon starvation protein CstA; KEGG: nit:NAL212_0285 carbon starvation protein CstA; carbon starvation protein CstA 320192 10932366 Nit79A3_0291 Nitrosomonas sp. Is79A3 carbon starvation protein CstA YP_004693587.1 318153 R 261292 CDS YP_004693588.1 339481802 10932367 complement(320185..320340) 1 NC_015731.1 hypothetical protein 320340 10932367 Nit79A3_0292 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693588.1 320185 R 261292 CDS YP_004693589.1 339481803 10932368 complement(320474..320902) 1 NC_015731.1 KEGG: lipoprotein; lipoprotein 320902 10932368 Nit79A3_0293 Nitrosomonas sp. Is79A3 lipoprotein YP_004693589.1 320474 R 261292 CDS YP_004693590.1 339481804 10932369 complement(321070..321819) 1 NC_015731.1 KEGG: hch:HCH_00819 hypothetical protein; hypothetical protein 321819 10932369 Nit79A3_0294 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693590.1 321070 R 261292 CDS YP_004693591.1 339481805 10932370 322371..323990 1 NC_015731.1 KEGG: prw:PsycPRwf_0663 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 323990 10932370 Nit79A3_0295 Nitrosomonas sp. Is79A3 response regulator receiver protein YP_004693591.1 322371 D 261292 CDS YP_004693592.1 339481806 10932371 324097..325389 1 NC_015731.1 PFAM: Cache, type 2; ATP-binding region, ATPase-like; KEGG: rpi:Rpic_3728 integral membrane sensor signal transduction histidine kinase; cache sensor protein 325389 10932371 Nit79A3_0296 Nitrosomonas sp. Is79A3 cache sensor protein YP_004693592.1 324097 D 261292 CDS YP_004693593.1 339481807 10932372 325368..326300 1 NC_015731.1 KEGG: rxy:Rxyl_0160 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; LuxR family transcriptional regulator 326300 10932372 Nit79A3_0297 Nitrosomonas sp. Is79A3 LuxR family transcriptional regulator YP_004693593.1 325368 D 261292 CDS YP_004693594.1 339481808 10932373 326552..327730 1 NC_015731.1 KEGG: gvi:gll2699 hypothetical protein; hypothetical protein 327730 10932373 Nit79A3_0298 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693594.1 326552 D 261292 CDS YP_004693595.1 339481809 10932374 327900..328955 1 NC_015731.1 KEGG: sin:YN1551_1251 glyceraldehyde-3-phosphate dehydrogenase; hypothetical protein 328955 10932374 Nit79A3_0299 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693595.1 327900 D 261292 CDS YP_004693596.1 339481810 10932376 329822..330862 1 NC_015731.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; KEGG: gca:Galf_0971 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 330862 10932376 Nit79A3_0301 Nitrosomonas sp. Is79A3 transposase IS116/IS110/IS902 family protein YP_004693596.1 329822 D 261292 CDS YP_004693597.1 339481811 10932378 331719..332681 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 332681 10932378 Nit79A3_0303 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004693597.1 331719 D 261292 CDS YP_004693598.1 339481812 10932379 333934..334755 1 NC_015731.1 KEGG: nit:NAL212_2598 IstB domain-containing protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 334755 10932379 Nit79A3_0304 Nitrosomonas sp. Is79A3 IstB domain-containing protein ATP-binding protein YP_004693598.1 333934 D 261292 CDS YP_004693599.1 339481813 10932381 complement(336196..336492) 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: net:Neut_2194 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 336492 10932381 Nit79A3_0306 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004693599.1 336196 R 261292 CDS YP_004693600.1 339481814 10932382 337077..337463 1 NC_015731.1 KEGG: dba:Dbac_1517 lipoprotein; lipoprotein 337463 10932382 Nit79A3_0307 Nitrosomonas sp. Is79A3 lipoprotein YP_004693600.1 337077 D 261292 CDS YP_004693601.1 339481815 10932383 337675..338346 1 NC_015731.1 hypothetical protein 338346 10932383 Nit79A3_0308 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693601.1 337675 D 261292 CDS YP_004693602.1 339481816 10932384 338397..338591 1 NC_015731.1 hypothetical protein 338591 10932384 Nit79A3_0309 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693602.1 338397 D 261292 CDS YP_004693603.1 339481817 10932386 complement(339011..340813) 1 NC_015731.1 PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; KEGG: cbe:Cbei_3785 two component LuxR family transcriptional regulator; LuxR family transcriptional regulator 340813 10932386 Nit79A3_0311 Nitrosomonas sp. Is79A3 LuxR family transcriptional regulator YP_004693603.1 339011 R 261292 CDS YP_004693604.1 339481818 10932387 complement(340834..342102) 1 NC_015731.1 PFAM: ATP-binding region, ATPase-like; Cache, type 2; KEGG: nwa:Nwat_1013 integral membrane sensor signal transduction histidine kinase; cache sensor protein 342102 10932387 Nit79A3_0312 Nitrosomonas sp. Is79A3 cache sensor protein YP_004693604.1 340834 R 261292 CDS YP_004693605.1 339481819 10932388 complement(342532..343875) 1 NC_015731.1 PFAM: Sodium:dicarboxylate symporter; KEGG: vpe:Varpa_1261 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 343875 10932388 Nit79A3_0313 Nitrosomonas sp. Is79A3 sodium:dicarboxylate symporter YP_004693605.1 342532 R 261292 CDS YP_004693606.1 339481820 10932391 complement(345181..345813) 1 NC_015731.1 PFAM: Phosphoadenosine phosphosulphate reductase; KEGG: ote:Oter_2431 phosphoadenylyl-sulfate reductase (thioredoxin); phosphoadenosine phosphosulfate reductase 345813 10932391 Nit79A3_0316 Nitrosomonas sp. Is79A3 phosphoadenosine phosphosulfate reductase YP_004693606.1 345181 R 261292 CDS YP_004693607.1 339481821 10932392 346003..346605 1 NC_015731.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal; KEGG: nmu:Nmul_A2387 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 346605 10932392 Nit79A3_0317 Nitrosomonas sp. Is79A3 alkyl hydroperoxide reductase YP_004693607.1 346003 D 261292 CDS YP_004693608.1 339481822 10932394 346942..347316 1 NC_015731.1 PFAM: thiol-disulphide oxidoreductase DCC; KEGG: nit:NAL212_1192 thiol-disulfide oxidoreductase DCC; thiol-disulfide oxidoreductase 347316 10932394 Nit79A3_0319 Nitrosomonas sp. Is79A3 thiol-disulfide oxidoreductase YP_004693608.1 346942 D 261292 CDS YP_004693609.1 339481823 10932395 347317..347424 1 NC_015731.1 hypothetical protein 347424 10932395 Nit79A3_0320 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693609.1 347317 D 261292 CDS YP_004693610.1 339481824 10932396 complement(347859..349130) 1 NC_015731.1 KEGG: dar:Daro_1641 hypothetical protein; hypothetical protein 349130 10932396 Nit79A3_0321 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693610.1 347859 R 261292 CDS YP_004693611.1 339481825 10932397 complement(349600..349869) 1 NC_015731.1 PFAM: Prophage CP4-57 regulatory; KEGG: shm:Shewmr7_1765 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA 349869 10932397 Nit79A3_0322 Nitrosomonas sp. Is79A3 phage transcriptional regulator AlpA YP_004693611.1 349600 R 261292 CDS YP_004693612.1 339481826 10932398 complement(350710..351618) 1 NC_015731.1 KEGG: hypothetical protein; hypothetical protein 351618 10932398 Nit79A3_0323 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693612.1 350710 R 261292 CDS YP_004693613.1 339481827 10932399 complement(351684..352691) 1 NC_015731.1 KEGG: phage-type endonuclease; TIGRFAM: phage-type endonuclease; PFAM: YqaJ viral recombinase; phage-type endonuclease 352691 10932399 Nit79A3_0324 Nitrosomonas sp. Is79A3 phage-type endonuclease YP_004693613.1 351684 R 261292 CDS YP_004693614.1 339481828 10932400 complement(352803..353771) 1 NC_015731.1 TIGRFAM: Conserved hypothetical protein CHP03299, phage/plasmid-related; KEGG: phage/plasmid-like protein; phage/plasmid-like protein 353771 10932400 Nit79A3_0325 Nitrosomonas sp. Is79A3 phage/plasmid-like protein YP_004693614.1 352803 R 261292 CDS YP_004693615.1 339481829 10932401 complement(353919..354245) 1 NC_015731.1 KEGG: alv:Alvin_3273 hypothetical protein; hypothetical protein 354245 10932401 Nit79A3_0326 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693615.1 353919 R 261292 CDS YP_004693616.1 339481830 10932402 354857..358102 1 NC_015731.1 KEGG: dde:Dde_1748 DEAD/DEAH box helicase-like; PFAM: DNA/RNA helicase, C-terminal; SNF2-related; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; helicase 358102 10932402 Nit79A3_0327 Nitrosomonas sp. Is79A3 helicase YP_004693616.1 354857 D 261292 CDS YP_004693617.1 339481831 10932403 358095..358895 1 NC_015731.1 KEGG: dde:Dde_1747 hypothetical protein; hypothetical protein 358895 10932403 Nit79A3_0328 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693617.1 358095 D 261292 CDS YP_004693618.1 339481832 10932404 358919..360970 1 NC_015731.1 PFAM: DNA methylase N-4/N-6; KEGG: noc:Noc_2928 site-specific DNA-methyltransferase (adenine-specific); DNA methylase N-4/N-6 domain-containing protein 360970 10932404 Nit79A3_0329 Nitrosomonas sp. Is79A3 DNA methylase N-4/N-6 domain-containing protein YP_004693618.1 358919 D 261292 CDS YP_004693619.1 339481833 10932405 360983..362668 1 NC_015731.1 PFAM: Protein of unknown function DUF262; Protein of unknown function DUF1524 RloF; KEGG: shn:Shewana3_1820 hypothetical protein; hypothetical protein 362668 10932405 Nit79A3_0330 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693619.1 360983 D 261292 CDS YP_004693620.1 339481834 10932406 362676..365732 1 NC_015731.1 PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: noc:Noc_2927 type III restriction enzyme, res subunit; type III restriction protein res subunit 365732 10932406 Nit79A3_0331 Nitrosomonas sp. Is79A3 type III restriction protein res subunit YP_004693620.1 362676 D 261292 CDS YP_004693621.1 339481835 10932407 365747..365866 1 NC_015731.1 hypothetical protein 365866 10932407 Nit79A3_0332 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693621.1 365747 D 261292 CDS YP_004693622.1 339481836 10932408 complement(366049..366264) 1 NC_015731.1 hypothetical protein 366264 10932408 Nit79A3_0333 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693622.1 366049 R 261292 CDS YP_004693623.1 339481837 10932409 complement(366346..367053) 1 NC_015731.1 PFAM: Pirin, N-terminal; KEGG: din:Selin_0368 pirin domain-containing protein; pirin 367053 10932409 Nit79A3_0334 Nitrosomonas sp. Is79A3 pirin YP_004693623.1 366346 R 261292 CDS YP_004693624.1 339481838 10932410 367607..368773 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: dar:Daro_2223 transposase IS4; transposase IS4 family protein 368773 10932410 Nit79A3_0335 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004693624.1 367607 D 261292 CDS YP_004693625.1 339481839 10932413 complement(369914..371218) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 371218 10932413 Nit79A3_0338 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004693625.1 369914 R 261292 CDS YP_004693626.1 339481840 10932414 371421..371684 1 NC_015731.1 KEGG: nit:NAL212_0061 hypothetical protein; hypothetical protein 371684 10932414 Nit79A3_0339 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693626.1 371421 D 261292 CDS YP_004693627.1 339481841 10932415 371978..372583 1 NC_015731.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: nit:NAL212_2526 peptidase S24/S26A/S26B, conserved region; peptidase S24/S26A/S26B 372583 10932415 Nit79A3_0340 Nitrosomonas sp. Is79A3 peptidase S24/S26A/S26B YP_004693627.1 371978 D 261292 CDS YP_004693628.1 339481842 10932416 372580..373971 1 NC_015731.1 TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; KEGG: nit:NAL212_2527 DNA polymerase III, epsilon subunit; SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; DNA polymerase III subunit epsilon 373971 10932416 Nit79A3_0341 Nitrosomonas sp. Is79A3 DNA polymerase III subunit epsilon YP_004693628.1 372580 D 261292 CDS YP_004693629.1 339481843 10932417 373964..375256 1 NC_015731.1 PFAM: DNA-repair protein, UmuC-like; KEGG: nit:NAL212_2528 DNA-directed DNA polymerase; UMUC domain-containing protein DNA-repair protein 375256 10932417 Nit79A3_0342 Nitrosomonas sp. Is79A3 UMUC domain-containing protein DNA-repair protein YP_004693629.1 373964 D 261292 CDS YP_004693630.1 339481844 10932418 complement(375302..375802) 1 NC_015731.1 KEGG: pat:Patl_3400 ribonuclease H; ribonuclease H 375802 10932418 Nit79A3_0343 Nitrosomonas sp. Is79A3 ribonuclease H YP_004693630.1 375302 R 261292 CDS YP_004693631.1 339481845 10932419 complement(376438..376989) 1 NC_015731.1 KEGG: gem:GM21_0307 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 376989 10932419 Nit79A3_0344 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004693631.1 376438 R 261292 CDS YP_004693632.1 339481846 10932420 complement(377572..378789) 1 NC_015731.1 PFAM: Integrase, catalytic core, phage; KEGG: nmu:Nmul_A0922 phage integrase; integrase 378789 10932420 Nit79A3_0345 Nitrosomonas sp. Is79A3 integrase YP_004693632.1 377572 R 261292 CDS YP_004693633.1 339481847 10932422 complement(379089..379934) 1 NC_015731.1 KEGG: nit:NAL212_3020 RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma factor RpoH, proteobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; RNA polymerase, sigma 32 subunit, RpoH 379934 10932422 Nit79A3_0346 Nitrosomonas sp. Is79A3 RNA polymerase, sigma 32 subunit, RpoH YP_004693633.1 379089 R 261292 CDS YP_004693634.1 339481848 10932423 complement(380047..380958) 1 NC_015731.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: nit:NAL212_3019 hypothetical protein; hypothetical protein 380958 10932423 Nit79A3_0347 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693634.1 380047 R 261292 CDS YP_004693635.1 339481849 10932424 complement(380955..381608) 1 NC_015731.1 TIGRFAM: Cell division ATP-binding protein FtsE; PFAM: ABC transporter-like; KEGG: nit:NAL212_3018 cell division ATP-binding protein FtsE; SMART: ATPase, AAA+ type, core; cell division ATP-binding protein FtsE 381608 10932424 Nit79A3_0348 Nitrosomonas sp. Is79A3 cell division ATP-binding protein FtsE YP_004693635.1 380955 R 261292 CDS YP_004693636.1 339481850 10932425 complement(381633..382658) 1 NC_015731.1 TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: nit:NAL212_3017 signal recognition particle-docking protein FtsY; SMART: ATPase, AAA+ type, core; signal recognition particle-docking protein FtsY 382658 10932425 Nit79A3_0349 Nitrosomonas sp. Is79A3 signal recognition particle-docking protein FtsY YP_004693636.1 381633 R 261292 CDS YP_004693637.1 339481851 10932426 382735..384138 1 NC_015731.1 PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: nit:NAL212_3016 processing peptidase; peptidase M16 domain-containing protein 384138 10932426 Nit79A3_0350 Nitrosomonas sp. Is79A3 peptidase M16 domain-containing protein YP_004693637.1 382735 D 261292 CDS YP_004693638.1 339481852 10932427 complement(384234..384617) 1 NC_015731.1 KEGG: nit:NAL212_3015 calcium-binding EF-hand; PFAM: EF-Hand domain; SMART: Calcium-binding EF-hand; EF hand repeat-containing protein 384617 10932427 Nit79A3_0351 Nitrosomonas sp. Is79A3 EF hand repeat-containing protein YP_004693638.1 384234 R 261292 CDS YP_004693639.1 339481853 10932428 complement(384755..385345) 1 NC_015731.1 HAMAP: Oligoribonuclease; PFAM: Exonuclease, RNase T/DNA polymerase III; KEGG: nit:NAL212_3014 exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; Oligoribonuclease 385345 10932428 Nit79A3_0352 Nitrosomonas sp. Is79A3 Oligoribonuclease YP_004693639.1 384755 R 261292 CDS YP_004693640.1 339481854 10932429 385456..386712 1 NC_015731.1 PFAM: Peptidase M48, Ste24p; KEGG: nit:NAL212_3013 STE24 endopeptidase; peptidase M48 Ste24p 386712 10932429 Nit79A3_0353 Nitrosomonas sp. Is79A3 peptidase M48 Ste24p YP_004693640.1 385456 D 261292 CDS YP_004693641.1 339481855 10932430 386709..387050 1 NC_015731.1 KEGG: nit:NAL212_3012 transcriptional coactivator/pterin dehydratase; HAMAP: pterin-4-alpha-carbinolamine dehydratase; PFAM: Transcriptional coactivator/pterin dehydratase; pterin-4-alpha-carbinolamine dehydratase 387050 10932430 Nit79A3_0354 Nitrosomonas sp. Is79A3 pterin-4-alpha-carbinolamine dehydratase YP_004693641.1 386709 D 261292 CDS YP_004693642.1 339481856 10932431 387047..387976 1 NC_015731.1 TIGRFAM: GTPase EngC; HAMAP: ribosome biogenesis GTPase RsgA; KEGG: nit:NAL212_3011 ribosome biogenesis GTPase RsgA; PFAM: GTPase EngC; ribosome biogenesis GTPase RsgA 387976 10932431 Nit79A3_0355 Nitrosomonas sp. Is79A3 ribosome biogenesis GTPase RsgA YP_004693642.1 387047 D 261292 CDS YP_004693643.1 339481857 10932432 complement(388028..388402) 1 NC_015731.1 KEGG: nit:NAL212_0416 dihydroneopterin aldolase; TIGRFAM: Dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; dihydroneopterin aldolase 388402 10932432 Nit79A3_0356 Nitrosomonas sp. Is79A3 dihydroneopterin aldolase YP_004693643.1 388028 R 261292 CDS YP_004693644.1 339481858 10932433 388509..389123 1 NC_015731.1 TIGRFAM: Membrane protein YgiH; HAMAP: Protein of unknown function DUF205; KEGG: nit:NAL212_0417 hypothetical protein; PFAM: Protein of unknown function DUF205; Glycerol-3-phosphate acyltransferase 389123 10932433 Nit79A3_0357 Nitrosomonas sp. Is79A3 Glycerol-3-phosphate acyltransferase YP_004693644.1 388509 D 261292 CDS YP_004693645.1 339481859 10932434 complement(389124..390155) 1 NC_015731.1 TIGRFAM: glycoprotease GCP; Peptidase M22, glycoprotease, subgroup; HAMAP: O-sialoglycoprotein endopeptidase; KEGG: nit:NAL212_0418 metalloendopeptidase, glycoprotease; PFAM: Peptidase M22, glycoprotease; O-sialoglycoprotein endopeptidase 390155 10932434 Nit79A3_0358 Nitrosomonas sp. Is79A3 O-sialoglycoprotein endopeptidase YP_004693645.1 389124 R 261292 CDS YP_004693646.1 339481860 10932435 390398..390586 1 NC_015731.1 KEGG: nit:NAL212_3155 hypothetical protein; hypothetical protein 390586 10932435 Nit79A3_0359 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693646.1 390398 D 261292 CDS YP_004693647.1 339481861 10932436 390649..391149 1 NC_015731.1 KEGG: nit:NAL212_3154 hypothetical protein; hypothetical protein 391149 10932436 Nit79A3_0360 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693647.1 390649 D 261292 CDS YP_004693648.1 339481862 10932437 complement(391160..391996) 1 NC_015731.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nit:NAL212_3153 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 391996 10932437 Nit79A3_0361 Nitrosomonas sp. Is79A3 short-chain dehydrogenase/reductase SDR YP_004693648.1 391160 R 261292 CDS YP_004693649.1 339481863 10932438 392136..392501 1 NC_015731.1 KEGG: nit:NAL212_3152 hypothetical protein; hypothetical protein 392501 10932438 Nit79A3_0362 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693649.1 392136 D 261292 CDS YP_004693650.1 339481864 10932439 392596..393117 1 NC_015731.1 KEGG: nit:NAL212_3151 hypothetical protein; hypothetical protein 393117 10932439 Nit79A3_0363 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693650.1 392596 D 261292 CDS YP_004693651.1 339481865 10932441 393830..395008 1 NC_015731.1 TIGRFAM: Thiolase; KEGG: nit:NAL212_0503 acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 395008 10932441 Nit79A3_0365 Nitrosomonas sp. Is79A3 acetyl-CoA acetyltransferase YP_004693651.1 393830 D 261292 CDS YP_004693652.1 339481866 10932442 395161..395535 1 NC_015731.1 PFAM: ATPase, F0 complex, subunit I, proteobacteria-type; KEGG: nit:NAL212_0504 ATP synthase I chain; ATP synthase I chain 395535 10932442 Nit79A3_0366 Nitrosomonas sp. Is79A3 ATP synthase I chain YP_004693652.1 395161 D 261292 CDS YP_004693653.1 339481867 10932443 395565..396374 1 NC_015731.1 TIGRFAM: ATPase, F0 complex, subunit A; HAMAP: ATP synthase subunit a; KEGG: nit:NAL212_0505 ATP synthase F0, A subunit; PFAM: ATPase, F0 complex, subunit A; ATP synthase subunit a 396374 10932443 Nit79A3_0367 Nitrosomonas sp. Is79A3 ATP synthase subunit a YP_004693653.1 395565 D 261292 CDS YP_004693654.1 339481868 10932444 396431..396703 1 NC_015731.1 TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: nit:NAL212_0506 ATP synthase F0, C subunit; PFAM: ATPase, F0/V0 complex, subunit C; ATP synthase subunit c 396703 10932444 Nit79A3_0368 Nitrosomonas sp. Is79A3 ATP synthase subunit c YP_004693654.1 396431 D 261292 CDS YP_004693655.1 339481869 10932445 396744..397217 1 NC_015731.1 TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATP synthase subunit b; KEGG: nit:NAL212_0507 ATP synthase F0, B subunit; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; ATP synthase subunit b 397217 10932445 Nit79A3_0369 Nitrosomonas sp. Is79A3 ATP synthase subunit b YP_004693655.1 396744 D 261292 CDS YP_004693656.1 339481870 10932446 397217..397753 1 NC_015731.1 TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; HAMAP: ATPase, F1 complex, OSCP/delta subunit; KEGG: nit:NAL212_0508 ATP synthase F1, delta subunit; PFAM: ATPase, F1 complex, OSCP/delta subunit; ATP synthase subunit delta 397753 10932446 Nit79A3_0370 Nitrosomonas sp. Is79A3 ATP synthase subunit delta YP_004693656.1 397217 D 261292 CDS YP_004693657.1 339481871 10932447 397766..399307 1 NC_015731.1 TIGRFAM: ATPase, F1 complex, alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; KEGG: nit:NAL212_0509 ATP synthase F1, alpha subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit alpha 399307 10932447 Nit79A3_0371 Nitrosomonas sp. Is79A3 ATP synthase subunit alpha YP_004693657.1 397766 D 261292 CDS YP_004693658.1 339481872 10932448 399311..400195 1 NC_015731.1 TIGRFAM: ATPase, F1 complex, gamma subunit; HAMAP: ATP synthase gamma chain; KEGG: nit:NAL212_0510 ATP synthase F1, gamma subunit; PFAM: ATPase, F1 complex, gamma subunit; ATP synthase subunit gamma 400195 10932448 Nit79A3_0372 Nitrosomonas sp. Is79A3 ATP synthase subunit gamma YP_004693658.1 399311 D 261292 CDS YP_004693659.1 339481873 10932449 400227..401606 1 NC_015731.1 SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, F1 complex, beta subunit; KEGG: nit:NAL212_0511 ATP synthase F1, beta subunit; HAMAP: ATPase, F1 complex, beta subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit beta 401606 10932449 Nit79A3_0373 Nitrosomonas sp. Is79A3 ATP synthase subunit beta YP_004693659.1 400227 D 261292 CDS YP_004693660.1 339481874 10932450 401624..402046 1 NC_015731.1 TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; HAMAP: ATPase, F1 complex, delta/epsilon subunit; KEGG: nit:NAL212_0512 ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; ATPase, F1 complex, delta/epsilon subunit, C-terminal; ATP synthase subunit epsilon 402046 10932450 Nit79A3_0374 Nitrosomonas sp. Is79A3 ATP synthase subunit epsilon YP_004693660.1 401624 D 261292 CDS YP_004693661.1 339481875 10932451 402280..403653 1 NC_015731.1 TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; KEGG: nit:NAL212_0513 bifunctional protein GlmU; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Bacterial transferase hexapeptide repeat; Bifunctional protein glmU 403653 10932451 Nit79A3_0375 Nitrosomonas sp. Is79A3 Bifunctional protein glmU YP_004693661.1 402280 D 261292 CDS YP_004693662.1 339481876 10932452 403714..405570 1 NC_015731.1 TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; HAMAP: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; KEGG: nit:NAL212_0514 glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: Sugar isomerase (SIS); Glutamine amidotransferase, class-II; Glucosamine--fructose-6-phosphate aminotransferase 405570 10932452 Nit79A3_0376 Nitrosomonas sp. Is79A3 Glucosamine--fructose-6-phosphate aminotransferase YP_004693662.1 403714 D 261292 CDS YP_004693663.1 339481877 10932453 405714..406439 1 NC_015731.1 TIGRFAM: Protein of unknown function DUF28; HAMAP: Protein of unknown function DUF28; KEGG: nit:NAL212_0515 hypothetical protein; PFAM: Protein of unknown function DUF28; hypothetical protein 406439 10932453 Nit79A3_0377 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693663.1 405714 D 261292 CDS YP_004693664.1 339481878 10932454 406448..406981 1 NC_015731.1 TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; HAMAP: Crossover junction endodeoxyribonuclease RuvC; KEGG: nit:NAL212_0516 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; Crossover junction endodeoxyribonuclease ruvC 406981 10932454 Nit79A3_0378 Nitrosomonas sp. Is79A3 Crossover junction endodeoxyribonuclease ruvC YP_004693664.1 406448 D 261292 CDS YP_004693665.1 339481879 10932455 406978..407562 1 NC_015731.1 TIGRFAM: Bacterial DNA recombination protein RuvA; HAMAP: Holliday junction ATP-dependent DNA helicase ruvA; KEGG: nit:NAL212_0517 Holliday junction ATP-dependent DNA helicase RuvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal; Holliday junction ATP-dependent DNA helicase ruvA 407562 10932455 Nit79A3_0379 Nitrosomonas sp. Is79A3 Holliday junction ATP-dependent DNA helicase ruvA YP_004693665.1 406978 D 261292 CDS YP_004693666.1 339481880 10932456 407589..408635 1 NC_015731.1 SMART: ATPase, AAA+ type, core; TIGRFAM: DNA helicase, Holliday junction RuvB type; KEGG: nit:NAL212_0518 Holliday junction DNA helicase RuvB; HAMAP: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal; Holliday junction ATP-dependent DNA helicase ruvB 408635 10932456 Nit79A3_0380 Nitrosomonas sp. Is79A3 Holliday junction ATP-dependent DNA helicase ruvB YP_004693666.1 407589 D 261292 CDS YP_004693667.1 339481881 10932457 408660..409100 1 NC_015731.1 KEGG: nit:NAL212_0519 hypothetical protein; hypothetical protein 409100 10932457 Nit79A3_0381 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693667.1 408660 D 261292 CDS YP_004693668.1 339481882 10932458 409219..409890 1 NC_015731.1 PFAM: Uncharacterised protein family UPF0005; KEGG: nit:NAL212_0520 hypothetical protein; hypothetical protein 409890 10932458 Nit79A3_0382 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693668.1 409219 D 261292 CDS YP_004693669.1 339481883 10932459 409994..410173 1 NC_015731.1 KEGG: nit:NAL212_0521 hypothetical protein; hypothetical protein 410173 10932459 Nit79A3_0383 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693669.1 409994 D 261292 CDS YP_004693670.1 339481884 10932460 410797..411618 1 NC_015731.1 KEGG: nit:NAL212_0523 cytochrome c oxidase, subunit II; TIGRFAM: Cytochrome c oxidase, subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal; Cytochrome C oxidase subunit II, transmembrane region; cytochrome c oxidase subunit II 411618 10932460 Nit79A3_0384 Nitrosomonas sp. Is79A3 cytochrome c oxidase subunit II YP_004693670.1 410797 D 261292 CDS YP_004693671.1 339481885 10932461 411631..413217 1 NC_015731.1 KEGG: nit:NAL212_0524 cytochrome c oxidase, subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I 413217 10932461 Nit79A3_0385 Nitrosomonas sp. Is79A3 cytochrome c oxidase subunit I YP_004693671.1 411631 D 261292 CDS YP_004693672.1 339481886 10932462 413238..413348 1 NC_015731.1 hypothetical protein 413348 10932462 Nit79A3_0386 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693672.1 413238 D 261292 CDS YP_004693673.1 339481887 10932463 413338..413865 1 NC_015731.1 PFAM: Cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: nit:NAL212_0526 cytochrome c oxidase assembly protein CtaG/Cox11; cytochrome c oxidase assembly protein CtaG/Cox11 413865 10932463 Nit79A3_0387 Nitrosomonas sp. Is79A3 cytochrome c oxidase assembly protein CtaG/Cox11 YP_004693673.1 413338 D 261292 CDS YP_004693674.1 339481888 10932464 413846..414103 1 NC_015731.1 KEGG: nit:NAL212_0527 transmembrane protein; transmembrane protein 414103 10932464 Nit79A3_0388 Nitrosomonas sp. Is79A3 transmembrane protein YP_004693674.1 413846 D 261292 CDS YP_004693675.1 339481889 10932465 414138..414995 1 NC_015731.1 PFAM: Cytochrome c oxidase, subunit III; KEGG: nit:NAL212_0528 cytochrome-c oxidase; cytochrome c oxidase subunit III 414995 10932465 Nit79A3_0389 Nitrosomonas sp. Is79A3 cytochrome c oxidase subunit III YP_004693675.1 414138 D 261292 CDS YP_004693676.1 339481890 10932466 415218..415937 1 NC_015731.1 KEGG: nit:NAL212_0529 surfeit locus 1 family protein; surfeit locus 1 family protein 415937 10932466 Nit79A3_0390 Nitrosomonas sp. Is79A3 surfeit locus 1 family protein YP_004693676.1 415218 D 261292 CDS YP_004693677.1 339481891 10932467 415909..416490 1 NC_015731.1 KEGG: nit:NAL212_0530 transmembrane protein; transmembrane protein 416490 10932467 Nit79A3_0391 Nitrosomonas sp. Is79A3 transmembrane protein YP_004693677.1 415909 D 261292 CDS YP_004693678.1 339481892 10932468 416575..417468 1 NC_015731.1 TIGRFAM: Protohaem IX farnesyltransferase; HAMAP: Protohaem IX farnesyltransferase; KEGG: nit:NAL212_0531 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; protoheme IX farnesyltransferase 417468 10932468 Nit79A3_0392 Nitrosomonas sp. Is79A3 protoheme IX farnesyltransferase YP_004693678.1 416575 D 261292 CDS YP_004693679.1 339481893 10932469 complement(417558..418931) 1 NC_015731.1 PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; KEGG: nit:NAL212_0532 D-lactate dehydrogenase (cytochrome); FAD linked oxidase domain-containing protein 418931 10932469 Nit79A3_0393 Nitrosomonas sp. Is79A3 FAD linked oxidase domain-containing protein YP_004693679.1 417558 R 261292 CDS YP_004693680.1 339481894 10932470 complement(418936..419514) 1 NC_015731.1 PFAM: Transport-associated; KEGG: nit:NAL212_0533 transport-associated protein; transport-associated protein 419514 10932470 Nit79A3_0394 Nitrosomonas sp. Is79A3 transport-associated protein YP_004693680.1 418936 R 261292 CDS YP_004693681.1 339481895 10932471 419628..420134 1 NC_015731.1 KEGG: nit:NAL212_0534 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; chemotaxis protein CheW 420134 10932471 Nit79A3_0395 Nitrosomonas sp. Is79A3 chemotaxis protein CheW YP_004693681.1 419628 D 261292 CDS YP_004693682.1 339481896 10932472 420202..421089 1 NC_015731.1 KEGG: nit:NAL212_0535 acetylglutamate kinase; TIGRFAM: Acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; acetylglutamate kinase 421089 10932472 Nit79A3_0396 Nitrosomonas sp. Is79A3 acetylglutamate kinase YP_004693682.1 420202 D 261292 CDS YP_004693683.1 339481897 10932473 complement(421213..421938) 1 NC_015731.1 KEGG: nit:NAL212_0536 RNA methyltransferase, TrmH family, group 1; TIGRFAM: RNA methyltransferase TrmH, group 1; PFAM: tRNA/rRNA methyltransferase, SpoU; TrmH family RNA methyltransferase 421938 10932473 Nit79A3_0397 Nitrosomonas sp. Is79A3 TrmH family RNA methyltransferase YP_004693683.1 421213 R 261292 CDS YP_004693684.1 339481898 10932474 422277..422855 1 NC_015731.1 PFAM: Plasmid pRiA4b ORF-3-like; KEGG: nit:NAL212_0727 plasmid pRiA4b ORF-3 family protein; plasmid pRiA4b ORF-3 family protein 422855 10932474 Nit79A3_0398 Nitrosomonas sp. Is79A3 plasmid pRiA4b ORF-3 family protein YP_004693684.1 422277 D 261292 CDS YP_004693685.1 339481899 10932476 423444..424610 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: dar:Daro_2223 transposase IS4; transposase IS4 family protein 424610 10932476 Nit79A3_0400 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004693685.1 423444 D 261292 CDS YP_004693686.1 339481900 10932477 426127..427161 1 NC_015731.1 KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase 427161 10932477 Nit79A3_0401 Nitrosomonas sp. Is79A3 isxo7 transposase YP_004693686.1 426127 D 261292 CDS YP_004693687.1 339481901 10932479 complement(428631..429329) 1 NC_015731.1 KEGG: bgl:bglu_2g22620 response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator 429329 10932479 Nit79A3_0403 Nitrosomonas sp. Is79A3 winged helix family two component transcriptional regulator YP_004693687.1 428631 R 261292 CDS YP_004693688.1 339481902 10932481 429892..430095 1 NC_015731.1 KEGG: nit:NAL212_2701 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 430095 10932481 Nit79A3_0405 Nitrosomonas sp. Is79A3 cold-shock DNA-binding domain-containing protein YP_004693688.1 429892 D 261292 CDS YP_004693689.1 339481903 10932482 complement(430150..430395) 1 NC_015731.1 hypothetical protein 430395 10932482 Nit79A3_0406 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693689.1 430150 R 261292 CDS YP_004693690.1 339481904 10932483 430586..431812 1 NC_015731.1 TIGRFAM: Arginine biosynthesis protein ArgJ; HAMAP: Arginine biosynthesis protein ArgJ; KEGG: nit:NAL212_2703 arginine biosynthesis bifunctional protein ArgJ; PFAM: Arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ 431812 10932483 Nit79A3_0407 Nitrosomonas sp. Is79A3 arginine biosynthesis bifunctional protein ArgJ YP_004693690.1 430586 D 261292 CDS YP_004693691.1 339481905 10932484 431824..432696 1 NC_015731.1 KEGG: nit:NAL212_2704 hypothetical protein; PFAM: Protein of unknown function DUF815; SMART: ATPase, AAA+ type, core; hypothetical protein 432696 10932484 Nit79A3_0408 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693691.1 431824 D 261292 CDS YP_004693692.1 339481906 10932485 432705..433673 1 NC_015731.1 PFAM: Thiamine monophosphate synthase; NUDIX hydrolase domain; KEGG: nit:NAL212_2705 thiamine monophosphate synthase; thiamine monophosphate synthase 433673 10932485 Nit79A3_0409 Nitrosomonas sp. Is79A3 thiamine monophosphate synthase YP_004693692.1 432705 D 261292 CDS YP_004693693.1 339481907 10932486 complement(433711..434847) 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: nit:NAL212_2706 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 434847 10932486 Nit79A3_0410 Nitrosomonas sp. Is79A3 diguanylate cyclase YP_004693693.1 433711 R 261292 CDS YP_004693694.1 339481908 10932487 complement(434847..435035) 1 NC_015731.1 KEGG: nit:NAL212_2707 uncharacterized zinc-binding family protein; HAMAP: Uncharacterised protein family, zinc-binding; PFAM: Uncharacterised protein family, zinc-binding; hypothetical protein 435035 10932487 Nit79A3_0411 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693694.1 434847 R 261292 CDS YP_004693695.1 339481909 10932488 435294..435878 1 NC_015731.1 KEGG: nit:NAL212_2708 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 435878 10932488 Nit79A3_0412 Nitrosomonas sp. Is79A3 ECF subfamily RNA polymerase sigma-24 subunit YP_004693695.1 435294 D 261292 CDS YP_004693696.1 339481910 10932489 435875..436444 1 NC_015731.1 KEGG: nit:NAL212_2709 hypothetical protein; hypothetical protein 436444 10932489 Nit79A3_0413 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693696.1 435875 D 261292 CDS YP_004693697.1 339481911 10932490 436798..439092 1 NC_015731.1 KEGG: nit:NAL212_2711 xenobiotic-transporting ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; ABC transporter 439092 10932490 Nit79A3_0414 Nitrosomonas sp. Is79A3 ABC transporter YP_004693697.1 436798 D 261292 CDS YP_004693698.1 339481912 10932491 439089..439562 1 NC_015731.1 PFAM: Domain of unknown function DUF1854; KEGG: nit:NAL212_2712 hypothetical protein; hypothetical protein 439562 10932491 Nit79A3_0415 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693698.1 439089 D 261292 CDS YP_004693699.1 339481913 10932492 complement(439600..440955) 1 NC_015731.1 KEGG: nit:NAL212_2716 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related; manually curated; TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; SMART: Ras small GTPase, Ras type; HAMAP: tRNA modification GTPase TrmE; tRNA modification GTPase mnmE 440955 10932492 Nit79A3_0416 Nitrosomonas sp. Is79A3 tRNA modification GTPase mnmE YP_004693699.1 439600 R 261292 CDS YP_004693700.1 339481914 10932493 complement(441026..442960) 1 NC_015731.1 TIGRFAM: Membrane insertion protein, OxoA/YidC, N-terminal; Membrane insertion protein, OxaA/YidC, core; HAMAP: Membrane protein oxaA; KEGG: nit:NAL212_2717 membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: Membrane insertion protein, OxaA/YidC; membrane protein OxaA 442960 10932493 Nit79A3_0417 Nitrosomonas sp. Is79A3 membrane protein OxaA YP_004693700.1 441026 R 261292 CDS YP_004693701.1 339481915 10932494 complement(443141..443350) 1 NC_015731.1 PFAM: Protein of unknown function DUF37; manually curated; TIGRFAM: Protein of unknown function DUF37; KEGG: nmu:Nmul_A2777 hypothetical protein; HAMAP: Protein of unknown function DUF37; hypothetical protein 443350 10932494 Nit79A3_0418 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693701.1 443141 R 261292 CDS YP_004693702.1 339481916 10932495 complement(443338..443691) 1 NC_015731.1 PFAM: Ribonuclease P; manually curated; TIGRFAM: Ribonuclease P; KEGG: nit:NAL212_2718 ribonuclease P protein component; HAMAP: Ribonuclease P; Ribonuclease P protein component 443691 10932495 Nit79A3_0419 Nitrosomonas sp. Is79A3 Ribonuclease P protein component YP_004693702.1 443338 R 261292 CDS YP_004693703.1 339481917 10932496 complement(443731..443865) 1 NC_015731.1 TIGRFAM: Ribosomal protein L34; HAMAP: 50S ribosomal protein L34; KEGG: nit:NAL212_2719 50S ribosomal protein L34; PFAM: Ribosomal protein L34; 50S ribosomal protein L34 443865 10932496 Nit79A3_0420 Nitrosomonas sp. Is79A3 50S ribosomal protein L34 YP_004693703.1 443731 R 261292 CDS YP_004693704.1 339481918 10932497 444281..444754 1 NC_015731.1 KEGG: nit:NAL212_2099 hypothetical protein; hypothetical protein 444754 10932497 Nit79A3_0421 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693704.1 444281 D 261292 CDS YP_004693705.1 339481919 10932498 445207..445863 1 NC_015731.1 hypothetical protein 445863 10932498 Nit79A3_0422 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693705.1 445207 D 261292 CDS YP_004693706.1 339481920 10932499 complement(446065..447405) 1 NC_015731.1 KEGG: nit:NAL212_2100 type I secretion outer membrane protein, TolC family; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein; type I secretion outer membrane protein, TolC family 447405 10932499 Nit79A3_0423 Nitrosomonas sp. Is79A3 type I secretion outer membrane protein, TolC family YP_004693706.1 446065 R 261292 CDS YP_004693707.1 339481921 10932500 complement(447411..448763) 1 NC_015731.1 KEGG: nit:NAL212_2101 type I secretion membrane fusion protein, HlyD family; TIGRFAM: Type I secretion membrane fusion protein, HlyD; PFAM: Secretion protein HlyD; type I secretion membrane fusion protein, HlyD family 448763 10932500 Nit79A3_0424 Nitrosomonas sp. Is79A3 type I secretion membrane fusion protein, HlyD family YP_004693707.1 447411 R 261292 CDS YP_004693708.1 339481922 10932501 complement(448824..450614) 1 NC_015731.1 TIGRFAM: ATPase, type I secretion system, PrtD; PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: nit:NAL212_2102 type I secretion system ATPase; SMART: ATPase, AAA+ type, core; type I secretion system ATPase 450614 10932501 Nit79A3_0425 Nitrosomonas sp. Is79A3 type I secretion system ATPase YP_004693708.1 448824 R 261292 CDS YP_004693709.1 339481923 10932502 complement(450693..451568) 1 NC_015731.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: nit:NAL212_2103 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 451568 10932502 Nit79A3_0426 Nitrosomonas sp. Is79A3 NAD-dependent epimerase/dehydratase YP_004693709.1 450693 R 261292 CDS YP_004693710.1 339481924 10932503 complement(451561..452520) 1 NC_015731.1 PFAM: Glycosyl transferase, family 2; KEGG: nit:NAL212_2104 glycosyl transferase 2; glycosyl transferase 2 452520 10932503 Nit79A3_0427 Nitrosomonas sp. Is79A3 glycosyl transferase 2 YP_004693710.1 451561 R 261292 CDS YP_004693711.1 339481925 10932504 complement(452489..453412) 1 NC_015731.1 KEGG: nwa:Nwat_0909 rhamnosyltransferase; TIGRFAM: Rhamnosyltransferase; PFAM: Glycosyl transferase, family 2; rhamnosyltransferase 453412 10932504 Nit79A3_0428 Nitrosomonas sp. Is79A3 rhamnosyltransferase YP_004693711.1 452489 R 261292 CDS YP_004693712.1 339481926 10932505 453592..453981 1 NC_015731.1 hypothetical protein 453981 10932505 Nit79A3_0429 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693712.1 453592 D 261292 CDS YP_004693713.1 339481927 10932506 454582..458226 1 NC_015731.1 PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; Glycosyl transferase, family 2; KEGG: avn:Avin_15980 glycosyl transferase, family 2; LmbE family protein 458226 10932506 Nit79A3_0430 Nitrosomonas sp. Is79A3 LmbE family protein YP_004693713.1 454582 D 261292 CDS YP_004693714.1 339481928 10932507 458226..460064 1 NC_015731.1 PFAM: Haloacid dehalogenase-like hydrolase; KEGG: avn:Avin_15990 hydrolase (HAD superfamily) protein; haloacid dehalogenase 460064 10932507 Nit79A3_0431 Nitrosomonas sp. Is79A3 haloacid dehalogenase YP_004693714.1 458226 D 261292 CDS YP_004693715.1 339481929 10932509 complement(461019..462839) 1 NC_015731.1 PFAM: Methyltransferase type 11; KEGG: nit:NAL212_3005 hypothetical protein; type 11 methyltransferase 462839 10932509 Nit79A3_0433 Nitrosomonas sp. Is79A3 type 11 methyltransferase YP_004693715.1 461019 R 261292 CDS YP_004693716.1 339481930 10932510 complement(462823..464109) 1 NC_015731.1 KEGG: nit:NAL212_3004 teichoic-acid-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 464109 10932510 Nit79A3_0434 Nitrosomonas sp. Is79A3 ABC transporter YP_004693716.1 462823 R 261292 CDS YP_004693717.1 339481931 10932511 complement(464099..464929) 1 NC_015731.1 KEGG: pol:Bpro_4002 hypothetical protein; manually curated; PFAM: ABC-2 type transporter; ABC transporter 464929 10932511 Nit79A3_0435 Nitrosomonas sp. Is79A3 ABC transporter YP_004693717.1 464099 R 261292 CDS YP_004693718.1 339481932 10932512 465549..467927 1 NC_015731.1 PFAM: Haemolysin-type calcium-binding region; KEGG: nit:NAL212_3002 hypothetical protein; Hemolysin-type calcium-binding protein 467927 10932512 Nit79A3_0436 Nitrosomonas sp. Is79A3 Hemolysin-type calcium-binding protein YP_004693718.1 465549 D 261292 CDS YP_004693719.1 339481933 10932513 468174..469709 1 NC_015731.1 PFAM: Methyltransferase regulatory domain, predicted; KEGG: rce:RC1_0828 hypothetical protein; Methyltransferase regulatory domain-containing protein 469709 10932513 Nit79A3_0437 Nitrosomonas sp. Is79A3 Methyltransferase regulatory domain-containing protein YP_004693719.1 468174 D 261292 CDS YP_004693720.1 339481934 10932514 complement(469767..470465) 1 NC_015731.1 KEGG: nit:NAL212_3001 orotidine 5'-phosphate decarboxylase; TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 1, core; PFAM: Orotidine 5'-phosphate decarboxylase, core; orotidine 5'-phosphate decarboxylase 470465 10932514 Nit79A3_0438 Nitrosomonas sp. Is79A3 orotidine 5'-phosphate decarboxylase YP_004693720.1 469767 R 261292 CDS YP_004693721.1 339481935 10932515 complement(470476..470685) 1 NC_015731.1 KEGG: nit:NAL212_3000 hypothetical protein; hypothetical protein 470685 10932515 Nit79A3_0439 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693721.1 470476 R 261292 CDS YP_004693722.1 339481936 10932516 complement(470905..471201) 1 NC_015731.1 SMART: Histone-like bacterial DNA-binding protein; TIGRFAM: Integration host factor, beta subunit; KEGG: nit:NAL212_2999 integration host factor, beta subunit; HAMAP: Integration host factor, beta subunit; PFAM: Histone-like bacterial DNA-binding protein; Integration host factor subunit beta 471201 10932516 Nit79A3_0440 Nitrosomonas sp. Is79A3 Integration host factor subunit beta YP_004693722.1 470905 R 261292 CDS YP_004693723.1 339481937 10932517 complement(471211..472923) 1 NC_015731.1 KEGG: nit:NAL212_2998 30S ribosomal protein S1; TIGRFAM: Ribosomal S1 synthesis/modification protein; PFAM: Ribosomal protein S1, RNA binding domain; 30S ribosomal protein S1 472923 10932517 Nit79A3_0441 Nitrosomonas sp. Is79A3 30S ribosomal protein S1 YP_004693723.1 471211 R 261292 CDS YP_004693724.1 339481938 10932518 complement(473050..473739) 1 NC_015731.1 TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: nit:NAL212_2997 cytidylate kinase; PFAM: Cytidylate kinase region; Cytidylate kinase 473739 10932518 Nit79A3_0442 Nitrosomonas sp. Is79A3 Cytidylate kinase YP_004693724.1 473050 R 261292 CDS YP_004693725.1 339481939 10932519 complement(473760..475115) 1 NC_015731.1 TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; KEGG: nit:NAL212_2996 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; 3-phosphoshikimate 1-carboxyvinyltransferase 475115 10932519 Nit79A3_0443 Nitrosomonas sp. Is79A3 3-phosphoshikimate 1-carboxyvinyltransferase YP_004693725.1 473760 R 261292 CDS YP_004693726.1 339481940 10932520 475371..475619 1 NC_015731.1 KEGG: nit:NAL212_2995 hypothetical protein; hypothetical protein 475619 10932520 Nit79A3_0444 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693726.1 475371 D 261292 CDS YP_004693727.1 339481941 10932521 complement(475736..478246) 1 NC_015731.1 TIGRFAM: DNA topoisomerase III, bacterial-type; PFAM: DNA topoisomerase, type IA, central; Toprim domain; KEGG: nit:NAL212_2994 DNA topoisomerase III; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; DNA topoisomerase III 478246 10932521 Nit79A3_0445 Nitrosomonas sp. Is79A3 DNA topoisomerase III YP_004693727.1 475736 R 261292 CDS YP_004693728.1 339481942 10932522 complement(478411..478911) 1 NC_015731.1 KEGG: nit:NAL212_2993 hypothetical protein; HAMAP: Protein smg; PFAM: Protein of unknown function DUF494; Protein smg 478911 10932522 Nit79A3_0446 Nitrosomonas sp. Is79A3 Protein smg YP_004693728.1 478411 R 261292 CDS YP_004693729.1 339481943 10932523 complement(478934..480034) 1 NC_015731.1 KEGG: nit:NAL212_2992 DNA protecting protein DprA; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A; DNA protecting protein DprA 480034 10932523 Nit79A3_0447 Nitrosomonas sp. Is79A3 DNA protecting protein DprA YP_004693729.1 478934 R 261292 CDS YP_004693730.1 339481944 10932524 complement(480053..481087) 1 NC_015731.1 KEGG: nit:NAL212_2991 peptidoglycan-binding lysin domain; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; peptidoglycan-binding lysin domain-containing protein 481087 10932524 Nit79A3_0448 Nitrosomonas sp. Is79A3 peptidoglycan-binding lysin domain-containing protein YP_004693730.1 480053 R 261292 CDS YP_004693731.1 339481945 10932525 481099..481698 1 NC_015731.1 TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: nit:NAL212_2990 peptide deformylase; PFAM: Formylmethionine deformylase; peptide deformylase 481698 10932525 Nit79A3_0449 Nitrosomonas sp. Is79A3 peptide deformylase YP_004693731.1 481099 D 261292 CDS YP_004693732.1 339481946 10932526 481823..482782 1 NC_015731.1 TIGRFAM: Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; KEGG: nit:NAL212_2989 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; Methionyl-tRNA formyltransferase 482782 10932526 Nit79A3_0450 Nitrosomonas sp. Is79A3 Methionyl-tRNA formyltransferase YP_004693732.1 481823 D 261292 CDS YP_004693733.1 339481947 10932527 482775..484052 1 NC_015731.1 KEGG: nit:NAL212_2988 sun protein; TIGRFAM: Fmu, rRNA SAM-dependent methyltransferase; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44; sun protein 484052 10932527 Nit79A3_0451 Nitrosomonas sp. Is79A3 sun protein YP_004693733.1 482775 D 261292 CDS YP_004693734.1 339481948 10932528 484060..484659 1 NC_015731.1 KEGG: nit:NAL212_2987 hypothetical protein; hypothetical protein 484659 10932528 Nit79A3_0452 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693734.1 484060 D 261292 CDS YP_004693735.1 339481949 10932529 484659..486836 1 NC_015731.1 KEGG: nit:NAL212_2986 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 486836 10932529 Nit79A3_0453 Nitrosomonas sp. Is79A3 integral membrane sensor signal transduction histidine kinase YP_004693735.1 484659 D 261292 CDS YP_004693736.1 339481950 10932530 486985..488247 1 NC_015731.1 KEGG: nit:NAL212_2985 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Signal transduction response regulator, receiver region; RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; Fis family transcriptional regulator 488247 10932530 Nit79A3_0454 Nitrosomonas sp. Is79A3 Fis family transcriptional regulator YP_004693736.1 486985 D 261292 CDS YP_004693737.1 339481951 10932531 488389..490404 1 NC_015731.1 KEGG: nit:NAL212_0188 transketolase; TIGRFAM: Transketolase, bacterial-like; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; transketolase 490404 10932531 Nit79A3_0455 Nitrosomonas sp. Is79A3 transketolase YP_004693737.1 488389 D 261292 CDS YP_004693738.1 339481952 10932532 490484..491482 1 NC_015731.1 KEGG: nit:NAL212_0187 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase, type I 491482 10932532 Nit79A3_0456 Nitrosomonas sp. Is79A3 glyceraldehyde-3-phosphate dehydrogenase, type I YP_004693738.1 490484 D 261292 CDS YP_004693739.1 339481953 10932533 491619..492797 1 NC_015731.1 KEGG: nit:NAL212_0186 phosphoglycerate kinase; HAMAP: Phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; Phosphoglycerate kinase 492797 10932533 Nit79A3_0457 Nitrosomonas sp. Is79A3 Phosphoglycerate kinase YP_004693739.1 491619 D 261292 CDS YP_004693740.1 339481954 10932534 492813..494264 1 NC_015731.1 KEGG: nit:NAL212_0185 pyruvate kinase; TIGRFAM: Pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; pyruvate kinase 494264 10932534 Nit79A3_0458 Nitrosomonas sp. Is79A3 pyruvate kinase YP_004693740.1 492813 D 261292 CDS YP_004693741.1 339481955 10932535 494400..495464 1 NC_015731.1 KEGG: nit:NAL212_0184 fructose-bisphosphate aldolase, class II, Calvin cycle subtype; TIGRFAM: Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Ketose-bisphosphate aldolase, class-II; PFAM: Ketose-bisphosphate aldolase, class-II; fructose-bisphosphate aldolase, class II, Calvin cycle subtype 495464 10932535 Nit79A3_0459 Nitrosomonas sp. Is79A3 fructose-bisphosphate aldolase, class II, Calvin cycle subtype YP_004693741.1 494400 D 261292 CDS YP_004693742.1 339481956 10932537 complement(496298..496882) 1 NC_015731.1 KEGG: afe:Lferr_0145 transposase; hypothetical protein 496882 10932537 Nit79A3_0461 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693742.1 496298 R 261292 CDS YP_004693743.1 339481957 10932538 complement(496855..497358) 1 NC_015731.1 KEGG: afe:Lferr_0146 hypothetical protein; hypothetical protein 497358 10932538 Nit79A3_0462 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693743.1 496855 R 261292 CDS YP_004693744.1 339481958 10932539 complement(497514..497792) 1 NC_015731.1 KEGG: nit:NAL212_2620 Fe(II) trafficking protein YggX; HAMAP: Fe(II) trafficking protein YggX; PFAM: Fe(II) trafficking protein YggX; Fe(2+)-trafficking protein 497792 10932539 Nit79A3_0463 Nitrosomonas sp. Is79A3 Fe(2+)-trafficking protein YP_004693744.1 497514 R 261292 CDS YP_004693745.1 339481959 10932540 complement(497902..499245) 1 NC_015731.1 KEGG: nit:NAL212_2619 amino-acid N-acetyltransferase; TIGRFAM: Amino-acid N-acetyltransferase (ArgA); PFAM: GCN5-related N-acetyltransferase; Aspartate/glutamate/uridylate kinase; amino-acid N-acetyltransferase 499245 10932540 Nit79A3_0464 Nitrosomonas sp. Is79A3 amino-acid N-acetyltransferase YP_004693745.1 497902 R 261292 CDS YP_004693746.1 339481960 10932541 complement(499289..500035) 1 NC_015731.1 KEGG: nit:NAL212_2618 ribosomal RNA small subunit methyltransferase E; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: Ribosomal RNA small subunit methyltransferase E; Ribosomal RNA small subunit methyltransferase E 500035 10932541 Nit79A3_0465 Nitrosomonas sp. Is79A3 Ribosomal RNA small subunit methyltransferase E YP_004693746.1 499289 R 261292 CDS YP_004693747.1 339481961 10932542 500193..500750 1 NC_015731.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: nit:NAL212_2617 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 500750 10932542 Nit79A3_0466 Nitrosomonas sp. Is79A3 alkyl hydroperoxide reductase YP_004693747.1 500193 D 261292 CDS YP_004693748.1 339481962 10932543 500753..501541 1 NC_015731.1 PFAM: Inositol monophosphatase; KEGG: nit:NAL212_2616 inositol monophosphatase; inositol monophosphatase 501541 10932543 Nit79A3_0467 Nitrosomonas sp. Is79A3 inositol monophosphatase YP_004693748.1 500753 D 261292 CDS YP_004693749.1 339481963 10932544 501551..503002 1 NC_015731.1 PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: nit:NAL212_2615 TrkA-N domain-containing protein; TrkA-N domain-containing protein 503002 10932544 Nit79A3_0468 Nitrosomonas sp. Is79A3 TrkA-N domain-containing protein YP_004693749.1 501551 D 261292 CDS YP_004693750.1 339481964 10932545 503015..504472 1 NC_015731.1 PFAM: Cation transporter; KEGG: nit:NAL212_2614 cation transporter; cation transporter 504472 10932545 Nit79A3_0469 Nitrosomonas sp. Is79A3 cation transporter YP_004693750.1 503015 D 261292 CDS YP_004693751.1 339481965 10932546 504608..504994 1 NC_015731.1 KEGG: nit:NAL212_2613 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 504994 10932546 Nit79A3_0470 Nitrosomonas sp. Is79A3 response regulator receiver protein YP_004693751.1 504608 D 261292 CDS YP_004693752.1 339481966 10932547 505357..506166 1 NC_015731.1 KEGG: nit:NAL212_2606 methane monooxygenase/ammonia monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; methane monooxygenase/ammonia monooxygenase subunit C 506166 10932547 Nit79A3_0471 Nitrosomonas sp. Is79A3 methane monooxygenase/ammonia monooxygenase subunit C YP_004693752.1 505357 D 261292 CDS YP_004693753.1 339481967 10932548 506347..507171 1 NC_015731.1 KEGG: nit:NAL212_2605 methane monooxygenase/ammonia monooxygenase, subunit A; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; methane monooxygenase/ammonia monooxygenase subunit A 507171 10932548 Nit79A3_0472 Nitrosomonas sp. Is79A3 methane monooxygenase/ammonia monooxygenase subunit A YP_004693753.1 506347 D 261292 CDS YP_004693754.1 339481968 10932549 507171..508433 1 NC_015731.1 KEGG: nit:NAL212_2604 methane monooxygenase/ammonia monooxygenase, subunit B; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; methane monooxygenase/ammonia monooxygenase subunit B 508433 10932549 Nit79A3_0473 Nitrosomonas sp. Is79A3 methane monooxygenase/ammonia monooxygenase subunit B YP_004693754.1 507171 D 261292 CDS YP_004693755.1 339481969 10932550 508603..509187 1 NC_015731.1 KEGG: nit:NAL212_2603 hypothetical protein; hypothetical protein 509187 10932550 Nit79A3_0474 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693755.1 508603 D 261292 CDS YP_004693756.1 339481970 10932551 509254..509835 1 NC_015731.1 KEGG: nit:NAL212_2602 hypothetical protein; hypothetical protein 509835 10932551 Nit79A3_0475 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693756.1 509254 D 261292 CDS YP_004693757.1 339481971 10932552 complement(510465..511067) 1 NC_015731.1 PFAM: SNARE associated Golgi protein; KEGG: abu:Abu_2024 hypothetical protein; hypothetical protein 511067 10932552 Nit79A3_0476 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693757.1 510465 R 261292 CDS YP_004693758.1 339481972 10932553 complement(511127..512065) 1 NC_015731.1 KEGG: nit:NAL212_1061 protein-export membrane protein SecF; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF 512065 10932553 Nit79A3_0477 Nitrosomonas sp. Is79A3 protein-export membrane protein SecF YP_004693758.1 511127 R 261292 CDS YP_004693759.1 339481973 10932554 complement(512090..514171) 1 NC_015731.1 KEGG: nit:NAL212_1060 protein-export membrane protein SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecD 514171 10932554 Nit79A3_0478 Nitrosomonas sp. Is79A3 protein-export membrane protein SecD YP_004693759.1 512090 R 261292 CDS YP_004693760.1 339481974 10932555 complement(514258..514716) 1 NC_015731.1 KEGG: nit:NAL212_1059 preprotein translocase, YajC subunit; TIGRFAM: YajC; PFAM: YajC; preprotein translocase subunit YajC 514716 10932555 Nit79A3_0479 Nitrosomonas sp. Is79A3 preprotein translocase subunit YajC YP_004693760.1 514258 R 261292 CDS YP_004693761.1 339481975 10932556 complement(514764..515849) 1 NC_015731.1 TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; KEGG: nit:NAL212_1058 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; Queuine tRNA-ribosyltransferase 515849 10932556 Nit79A3_0480 Nitrosomonas sp. Is79A3 Queuine tRNA-ribosyltransferase YP_004693761.1 514764 R 261292 CDS YP_004693762.1 339481976 10932557 complement(515846..516880) 1 NC_015731.1 TIGRFAM: Queuosine biosynthesis protein; HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; KEGG: nit:NAL212_1057 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 516880 10932557 Nit79A3_0481 Nitrosomonas sp. Is79A3 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_004693762.1 515846 R 261292 CDS YP_004693763.1 339481977 10932561 519760..520227 1 NC_015731.1 manually curated; KEGG: rso:RSc2475 hypothetical protein; hypothetical protein 520227 10932561 Nit79A3_0484 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693763.1 519760 D 261292 CDS YP_004693764.1 339481978 10932562 complement(521631..523265) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: afe:Lferr_1749 hypothetical protein; transposase IS4 family protein 523265 10932562 Nit79A3_0485 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004693764.1 521631 R 261292 CDS YP_004693765.1 339481979 10932563 complement(523458..524237) 1 NC_015731.1 KEGG: cyt:cce_4803 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 524237 10932563 Nit79A3_0486 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004693765.1 523458 R 261292 CDS YP_004693766.1 339481980 10932564 524965..525135 1 NC_015731.1 hypothetical protein 525135 10932564 Nit79A3_0487 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693766.1 524965 D 261292 CDS YP_004693767.1 339481981 10932565 complement(526146..526640) 1 NC_015731.1 KEGG: nit:NAL212_1596 hypothetical protein; hypothetical protein 526640 10932565 Nit79A3_0488 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693767.1 526146 R 261292 CDS YP_004693768.1 339481982 10932566 complement(527155..527307) 1 NC_015731.1 hypothetical protein 527307 10932566 Nit79A3_0489 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693768.1 527155 R 261292 CDS YP_004693769.1 339481983 10932567 528304..530157 1 NC_015731.1 KEGG: nit:NAL212_0490 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 530157 10932567 Nit79A3_0490 Nitrosomonas sp. Is79A3 ABC transporter YP_004693769.1 528304 D 261292 CDS YP_004693770.1 339481984 10932568 complement(530205..530528) 1 NC_015731.1 TIGRFAM: Flagellar hook-basal body complex protein FliE; HAMAP: Flagellar hook-basal body complex protein FliE; KEGG: nit:NAL212_0489 flagellar hook-basal body complex subunit FliE; PFAM: Flagellar hook-basal body complex protein FliE; Flagellar hook-basal body complex protein fliE 530528 10932568 Nit79A3_0491 Nitrosomonas sp. Is79A3 Flagellar hook-basal body complex protein fliE YP_004693770.1 530205 R 261292 CDS YP_004693771.1 339481985 10932569 complement(530627..531937) 1 NC_015731.1 KEGG: nit:NAL212_0488 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; Fis family transcriptional regulator 531937 10932569 Nit79A3_0492 Nitrosomonas sp. Is79A3 Fis family transcriptional regulator YP_004693771.1 530627 R 261292 CDS YP_004693772.1 339481986 10932570 complement(531942..533132) 1 NC_015731.1 KEGG: nit:NAL212_0487 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAS/PAC sensor signal transduction histidine kinase 533132 10932570 Nit79A3_0493 Nitrosomonas sp. Is79A3 PAS/PAC sensor signal transduction histidine kinase YP_004693772.1 531942 R 261292 CDS YP_004693773.1 339481987 10932571 533475..535148 1 NC_015731.1 KEGG: nit:NAL212_0486 flagellar M-ring protein FliF; TIGRFAM: Flagellar FliF M-ring protein; PFAM: Flagellar M-ring C-terminal; Secretory protein YscJ/FliF; flagellar M-ring protein FliF 535148 10932571 Nit79A3_0494 Nitrosomonas sp. Is79A3 flagellar M-ring protein FliF YP_004693773.1 533475 D 261292 CDS YP_004693774.1 339481988 10932572 535141..536136 1 NC_015731.1 KEGG: nit:NAL212_0485 flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG; flagellar motor switch protein FliG 536136 10932572 Nit79A3_0495 Nitrosomonas sp. Is79A3 flagellar motor switch protein FliG YP_004693774.1 535141 D 261292 CDS YP_004693775.1 339481989 10932573 536214..536921 1 NC_015731.1 PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: nit:NAL212_0484 flagellar assembly protein FliH/type III secretion system HrpE; flagellar assembly protein FliH 536921 10932573 Nit79A3_0496 Nitrosomonas sp. Is79A3 flagellar assembly protein FliH YP_004693775.1 536214 D 261292 CDS YP_004693776.1 339481990 10932574 536924..538330 1 NC_015731.1 TIGRFAM: Flagellar protein export ATPase, FliI; ATPase, type III secretion system, FliI/YscN; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; KEGG: nit:NAL212_0483 flagellar protein export ATPase FliI; SMART: ATPase, AAA+ type, core; flagellar protein export ATPase FliI 538330 10932574 Nit79A3_0497 Nitrosomonas sp. Is79A3 flagellar protein export ATPase FliI YP_004693776.1 536924 D 261292 CDS YP_004693777.1 339481991 10932575 538349..538807 1 NC_015731.1 TIGRFAM: Flagellar export FliJ; KEGG: nit:NAL212_0482 flagellar export protein FliJ; flagellar export protein FliJ 538807 10932575 Nit79A3_0498 Nitrosomonas sp. Is79A3 flagellar export protein FliJ YP_004693777.1 538349 D 261292 CDS YP_004693778.1 339481992 10932576 538889..540076 1 NC_015731.1 PFAM: Flagellar hook-length control protein; KEGG: nit:NAL212_0481 flagellar hook-length control protein-like protein; flagellar hook-length control protein 540076 10932576 Nit79A3_0499 Nitrosomonas sp. Is79A3 flagellar hook-length control protein YP_004693778.1 538889 D 261292 CDS YP_004693779.1 339481993 10932577 540417..540905 1 NC_015731.1 PFAM: Flagellar basal body-associated protein FliL; KEGG: nit:NAL212_0480 flagellar basal body-associated protein FliL; flagellar basal body protein FliL 540905 10932577 Nit79A3_0500 Nitrosomonas sp. Is79A3 flagellar basal body protein FliL YP_004693779.1 540417 D 261292 CDS YP_004693780.1 339481994 10932578 540913..541890 1 NC_015731.1 KEGG: nit:NAL212_0479 flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA); flagellar motor switch protein FliM 541890 10932578 Nit79A3_0501 Nitrosomonas sp. Is79A3 flagellar motor switch protein FliM YP_004693780.1 540913 D 261292 CDS YP_004693781.1 339481995 10932579 541908..542432 1 NC_015731.1 KEGG: nit:NAL212_0478 flagellar motor switch protein FliN; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA); flagellar motor switch protein FliN 542432 10932579 Nit79A3_0502 Nitrosomonas sp. Is79A3 flagellar motor switch protein FliN YP_004693781.1 541908 D 261292 CDS YP_004693782.1 339481996 10932580 542440..542877 1 NC_015731.1 KEGG: nit:NAL212_0477 flagellar biosynthetic protein FliO; TIGRFAM: Flagellar biosynthesis protein, FliO; PFAM: Flagellar biosynthesis protein, FliO; flagellar biosynthetic protein FliO 542877 10932580 Nit79A3_0503 Nitrosomonas sp. Is79A3 flagellar biosynthetic protein FliO YP_004693782.1 542440 D 261292 CDS YP_004693783.1 339481997 10932581 542870..543718 1 NC_015731.1 KEGG: nit:NAL212_0476 flagellar biosynthetic protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP 543718 10932581 Nit79A3_0504 Nitrosomonas sp. Is79A3 flagellar biosynthetic protein FliP YP_004693783.1 542870 D 261292 CDS YP_004693784.1 339481998 10932582 543732..544004 1 NC_015731.1 KEGG: nit:NAL212_0475 flagellar biosynthetic protein FliQ; TIGRFAM: Flagellar biosynthesis protein FliQ; PFAM: Bacterial export protein FliQ, family 3; flagellar biosynthetic protein FliQ 544004 10932582 Nit79A3_0505 Nitrosomonas sp. Is79A3 flagellar biosynthetic protein FliQ YP_004693784.1 543732 D 261292 CDS YP_004693785.1 339481999 10932583 544103..544900 1 NC_015731.1 KEGG: nit:NAL212_0474 flagellar biosynthetic protein FliR; TIGRFAM: Flagellar biosynthesis protein FliR; PFAM: Type III secretion system inner membrane R protein; flagellar biosynthetic protein FliR 544900 10932583 Nit79A3_0506 Nitrosomonas sp. Is79A3 flagellar biosynthetic protein FliR YP_004693785.1 544103 D 261292 CDS YP_004693786.1 339482000 10932584 545096..546919 1 NC_015731.1 KEGG: nit:NAL212_0473 hypothetical protein; hypothetical protein 546919 10932584 Nit79A3_0507 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693786.1 545096 D 261292 CDS YP_004693787.1 339482001 10932585 complement(546964..548079) 1 NC_015731.1 TIGRFAM: tRNA 2-selenouridine synthase; HAMAP: tRNA 2-selenouridine synthase; KEGG: shw:Sputw3181_3681 tRNA 2-selenouridine synthase; SMART: Rhodanese-like; tRNA 2-selenouridine synthase 548079 10932585 Nit79A3_0508 Nitrosomonas sp. Is79A3 tRNA 2-selenouridine synthase YP_004693787.1 546964 R 261292 CDS YP_004693788.1 339482002 10932586 548555..550378 1 NC_015731.1 PFAM: AMP-dependent synthetase/ligase; KEGG: nit:NAL212_0307 long-chain-fatty-acid--(acyl-carrier-protein) ligase; AMP-dependent synthetase/ligase 550378 10932586 Nit79A3_0509 Nitrosomonas sp. Is79A3 AMP-dependent synthetase/ligase YP_004693788.1 548555 D 261292 CDS YP_004693789.1 339482003 10932587 550385..551302 1 NC_015731.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: nit:NAL212_0308 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 551302 10932587 Nit79A3_0510 Nitrosomonas sp. Is79A3 NAD-dependent epimerase/dehydratase YP_004693789.1 550385 D 261292 CDS YP_004693790.1 339482004 10932588 551333..551587 1 NC_015731.1 PFAM: Phosphopantetheine-binding; KEGG: nit:NAL212_0309 phosphopantetheine-binding protein; phosphopantetheine-binding protein 551587 10932588 Nit79A3_0511 Nitrosomonas sp. Is79A3 phosphopantetheine-binding protein YP_004693790.1 551333 D 261292 CDS YP_004693791.1 339482005 10932589 551587..552768 1 NC_015731.1 PFAM: Aminotransferase, class I/II; KEGG: nit:NAL212_0310 8-amino-7-oxononanoate synthase; class I and II aminotransferase 552768 10932589 Nit79A3_0512 Nitrosomonas sp. Is79A3 class I and II aminotransferase YP_004693791.1 551587 D 261292 CDS YP_004693792.1 339482006 10932590 552934..553584 1 NC_015731.1 KEGG: nit:NAL212_0311 hypothetical protein; hypothetical protein 553584 10932590 Nit79A3_0513 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693792.1 552934 D 261292 CDS YP_004693793.1 339482007 10932591 complement(553610..555796) 1 NC_015731.1 KEGG: app:CAP2UW1_1594 pyridine nucleotide-disulfide oxidoreductase; TIGRFAM: Pyridine nucleotide-disulphide oxidoreductase, N-terminal; Selenide water dikinase; PFAM: AIR synthase related protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; AIR synthase related protein, C-terminal; Pyridine nucleotide-disulfide oxidoreductase 555796 10932591 Nit79A3_0514 Nitrosomonas sp. Is79A3 Pyridine nucleotide-disulfide oxidoreductase YP_004693793.1 553610 R 261292 CDS YP_004693794.1 339482008 10932592 556021..556536 1 NC_015731.1 PFAM: Peptidoglycan binding-like; KEGG: nit:NAL212_0701 peptidoglycan-binding domain 1 protein; peptidoglycan-binding domain 1 protein 556536 10932592 Nit79A3_0515 Nitrosomonas sp. Is79A3 peptidoglycan-binding domain 1 protein YP_004693794.1 556021 D 261292 CDS YP_004693795.1 339482009 10932593 556996..558114 1 NC_015731.1 KEGG: nit:NAL212_0702 hopanoid biosynthesis associated radical SAM protein HpnH; TIGRFAM: Hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM; hopanoid biosynthesis associated radical SAM protein HpnH 558114 10932593 Nit79A3_0516 Nitrosomonas sp. Is79A3 hopanoid biosynthesis associated radical SAM protein HpnH YP_004693795.1 556996 D 261292 CDS YP_004693796.1 339482010 10932594 558167..559297 1 NC_015731.1 PFAM: Glycosyl transferase, family 2; KEGG: nit:NAL212_0703 glycosyl transferase 2; glycosyl transferase 2 559297 10932594 Nit79A3_0517 Nitrosomonas sp. Is79A3 glycosyl transferase 2 YP_004693796.1 558167 D 261292 CDS YP_004693797.1 339482011 10932595 559326..559907 1 NC_015731.1 KEGG: nit:NAL212_0704 hopanoid biosynthesis associated membrane protein HpnM; TIGRFAM: Hopanoid biosynthesis-associated membrane protein HpnM; PFAM: Toluene tolerance; hopanoid biosynthesis associated membrane protein HpnM 559907 10932595 Nit79A3_0518 Nitrosomonas sp. Is79A3 hopanoid biosynthesis associated membrane protein HpnM YP_004693797.1 559326 D 261292 CDS YP_004693798.1 339482012 10932596 559949..562612 1 NC_015731.1 TIGRFAM: Hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: nit:NAL212_0705 hopanoid biosynthesis associated RND transporter like protein HpnN; hopanoid biosynthesis associated RND transporter-like protein HpnN 562612 10932596 Nit79A3_0519 Nitrosomonas sp. Is79A3 hopanoid biosynthesis associated RND transporter-like protein HpnN YP_004693798.1 559949 D 261292 CDS YP_004693799.1 339482013 10932597 complement(562616..563887) 1 NC_015731.1 PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; KEGG: nit:NAL212_0706 Fmu (Sun) domain-containing protein; Fmu (Sun) domain-containing protein 563887 10932597 Nit79A3_0520 Nitrosomonas sp. Is79A3 Fmu (Sun) domain-containing protein YP_004693799.1 562616 R 261292 CDS YP_004693800.1 339482014 10932598 complement(563969..564685) 1 NC_015731.1 KEGG: nit:NAL212_0707 hypothetical protein; hypothetical protein 564685 10932598 Nit79A3_0521 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693800.1 563969 R 261292 CDS YP_004693801.1 339482015 10932599 complement(564682..565320) 1 NC_015731.1 KEGG: nit:NAL212_0708 phosphoribosylglycinamide formyltransferase; TIGRFAM: Phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal; phosphoribosylglycinamide formyltransferase 565320 10932599 Nit79A3_0522 Nitrosomonas sp. Is79A3 phosphoribosylglycinamide formyltransferase YP_004693801.1 564682 R 261292 CDS YP_004693802.1 339482016 10932600 complement(565344..566402) 1 NC_015731.1 KEGG: nit:NAL212_0709 phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; phosphoribosylformylglycinamidine cyclo-ligase 566402 10932600 Nit79A3_0523 Nitrosomonas sp. Is79A3 phosphoribosylformylglycinamidine cyclo-ligase YP_004693802.1 565344 R 261292 CDS YP_004693803.1 339482017 10932601 complement(566802..567323) 1 NC_015731.1 hypothetical protein 567323 10932601 Nit79A3_0524 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693803.1 566802 R 261292 CDS YP_004693804.1 339482018 10932602 567545..567697 1 NC_015731.1 hypothetical protein 567697 10932602 Nit79A3_0525 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693804.1 567545 D 261292 CDS YP_004693805.1 339482019 10932603 567860..569248 1 NC_015731.1 PFAM: Aminotransferase class-III; KEGG: nit:NAL212_0712 acetylornithine transaminase; class III aminotransferase 569248 10932603 Nit79A3_0526 Nitrosomonas sp. Is79A3 class III aminotransferase YP_004693805.1 567860 D 261292 CDS YP_004693806.1 339482020 10932604 569256..570320 1 NC_015731.1 PFAM: Uncharacterised protein family UPF0118; KEGG: nit:NAL212_0713 hypothetical protein; hypothetical protein 570320 10932604 Nit79A3_0527 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693806.1 569256 D 261292 CDS YP_004693807.1 339482021 10932605 570366..571043 1 NC_015731.1 KEGG: nit:NAL212_0714 DnaA regulatory inactivator Hda; TIGRFAM: Chromosomal replication control, regulator Hda; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); chromosome replication initiator DnaA 571043 10932605 Nit79A3_0528 Nitrosomonas sp. Is79A3 chromosome replication initiator DnaA YP_004693807.1 570366 D 261292 CDS YP_004693808.1 339482022 10932606 571040..571702 1 NC_015731.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: nit:NAL212_0715 HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase 571702 10932606 Nit79A3_0529 Nitrosomonas sp. Is79A3 HAD-superfamily hydrolase YP_004693808.1 571040 D 261292 CDS YP_004693809.1 339482023 10932608 complement(572635..574524) 1 NC_015731.1 hypothetical protein 574524 10932608 Nit79A3_0531 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693809.1 572635 R 261292 CDS YP_004693810.1 339482024 10932609 complement(574632..576140) 1 NC_015731.1 TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: nit:NAL212_0716 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; lysyl-tRNA synthetase 576140 10932609 Nit79A3_0532 Nitrosomonas sp. Is79A3 lysyl-tRNA synthetase YP_004693810.1 574632 R 261292 CDS YP_004693811.1 339482025 10932610 complement(576428..577666) 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; GAF; HAMP linker domain; KEGG: nit:NAL212_0721 diguanylate cyclase with GAF sensor; SMART: Diguanylate cyclase, predicted; GAF sensor-containing diguanylate cyclase 577666 10932610 Nit79A3_0533 Nitrosomonas sp. Is79A3 GAF sensor-containing diguanylate cyclase YP_004693811.1 576428 R 261292 CDS YP_004693812.1 339482026 10932611 577911..578315 1 NC_015731.1 PFAM: Phosphotransferase system, fructose subfamily IIA component; KEGG: nit:NAL212_0722 PTS system fructose subfamily IIA component; PTS system fructose subfamily IIA component 578315 10932611 Nit79A3_0534 Nitrosomonas sp. Is79A3 PTS system fructose subfamily IIA component YP_004693812.1 577911 D 261292 CDS YP_004693813.1 339482027 10932612 578305..578574 1 NC_015731.1 KEGG: nit:NAL212_0723 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; PFAM: Phosphotransferase system, phosphocarrier HPr protein; Phosphotransferase system, phosphocarrier protein HPr 578574 10932612 Nit79A3_0535 Nitrosomonas sp. Is79A3 Phosphotransferase system, phosphocarrier protein HPr YP_004693813.1 578305 D 261292 CDS YP_004693814.1 339482028 10932613 578571..580298 1 NC_015731.1 KEGG: nit:NAL212_0724 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile region; phosphoenolpyruvate-protein phosphotransferase 580298 10932613 Nit79A3_0536 Nitrosomonas sp. Is79A3 phosphoenolpyruvate-protein phosphotransferase YP_004693814.1 578571 D 261292 CDS YP_004693815.1 339482029 10932614 580441..581568 1 NC_015731.1 TIGRFAM: Homoserine O-acetyltransferase; HAMAP: Homoserine O-acetyltransferase; KEGG: nit:NAL212_0725 homoserine O-acetyltransferase; PFAM: Alpha/beta hydrolase fold-1; Homoserine O-acetyltransferase 581568 10932614 Nit79A3_0537 Nitrosomonas sp. Is79A3 Homoserine O-acetyltransferase YP_004693815.1 580441 D 261292 CDS YP_004693816.1 339482030 10932615 581591..582205 1 NC_015731.1 KEGG: nit:NAL212_0726 methionine biosynthesis protein MetW; TIGRFAM: Methionine biosynthesis MetW; PFAM: Methionine biosynthesis MetW; methionine biosynthesis protein MetW 582205 10932615 Nit79A3_0538 Nitrosomonas sp. Is79A3 methionine biosynthesis protein MetW YP_004693816.1 581591 D 261292 CDS YP_004693817.1 339482031 10932616 complement(582231..583070) 1 NC_015731.1 PFAM: Protein of unknown function DUF455; KEGG: nit:NAL212_0728 hypothetical protein; hypothetical protein 583070 10932616 Nit79A3_0539 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693817.1 582231 R 261292 CDS YP_004693818.1 339482032 10932617 583243..583665 1 NC_015731.1 PFAM: Thioesterase superfamily; KEGG: nit:NAL212_0729 thioesterase superfamily protein; thioesterase 583665 10932617 Nit79A3_0540 Nitrosomonas sp. Is79A3 thioesterase YP_004693818.1 583243 D 261292 CDS YP_004693819.1 339482033 10932618 complement(583827..584147) 1 NC_015731.1 KEGG: gur:Gura_0563 hypothetical protein; hypothetical protein 584147 10932618 Nit79A3_0541 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693819.1 583827 R 261292 CDS YP_004693820.1 339482034 10932619 complement(584131..584424) 1 NC_015731.1 KEGG: gur:Gura_0562 hypothetical protein; hypothetical protein 584424 10932619 Nit79A3_0542 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693820.1 584131 R 261292 CDS YP_004693821.1 339482035 10932620 584603..585523 1 NC_015731.1 PFAM: Sulfotransferase; KEGG: nit:NAL212_0730 sulfotransferase; sulfotransferase 585523 10932620 Nit79A3_0543 Nitrosomonas sp. Is79A3 sulfotransferase YP_004693821.1 584603 D 261292 CDS YP_004693822.1 339482036 10932621 585589..585783 1 NC_015731.1 PFAM: Addiction module component, CHP02574; addiction module component CHP02574 family protein 585783 10932621 Nit79A3_0544 Nitrosomonas sp. Is79A3 addiction module component CHP02574 family protein YP_004693822.1 585589 D 261292 CDS YP_004693823.1 339482037 10932622 complement(586147..586605) 1 NC_015731.1 hypothetical protein 586605 10932622 Nit79A3_0545 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693823.1 586147 R 261292 CDS YP_004693824.1 339482038 10932623 complement(586598..587536) 1 NC_015731.1 hypothetical protein 587536 10932623 Nit79A3_0546 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693824.1 586598 R 261292 CDS YP_004693825.1 339482039 10932624 complement(587711..588415) 1 NC_015731.1 TIGRFAM: 6-phosphogluconolactonase; KEGG: nit:NAL212_0733 6-phosphogluconolactonase; 6-phosphogluconolactonase 588415 10932624 Nit79A3_0547 Nitrosomonas sp. Is79A3 6-phosphogluconolactonase YP_004693825.1 587711 R 261292 CDS YP_004693826.1 339482040 10932625 complement(588432..589073) 1 NC_015731.1 PFAM: Haloacid dehalogenase-like hydrolase; KEGG: nit:NAL212_0734 haloacid dehalogenase domain-containing protein hydrolase; haloacid dehalogenase 589073 10932625 Nit79A3_0548 Nitrosomonas sp. Is79A3 haloacid dehalogenase YP_004693826.1 588432 R 261292 CDS YP_004693827.1 339482041 10932626 complement(589076..590005) 1 NC_015731.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: nit:NAL212_0735 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 590005 10932626 Nit79A3_0549 Nitrosomonas sp. Is79A3 NAD-dependent epimerase/dehydratase YP_004693827.1 589076 R 261292 CDS YP_004693828.1 339482042 10932627 complement(590010..590948) 1 NC_015731.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; KEGG: nit:NAL212_0736 phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 590948 10932627 Nit79A3_0550 Nitrosomonas sp. Is79A3 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004693828.1 590010 R 261292 CDS YP_004693829.1 339482043 10932628 complement(590945..591715) 1 NC_015731.1 PFAM: HpcH/HpaI aldolase; KEGG: nit:NAL212_0737 4-hydroxy-2-oxovalerate aldolase; HpcH/HpaI aldolase 591715 10932628 Nit79A3_0551 Nitrosomonas sp. Is79A3 HpcH/HpaI aldolase YP_004693829.1 590945 R 261292 CDS YP_004693830.1 339482044 10932629 complement(591724..592473) 1 NC_015731.1 PFAM: Acylneuraminate cytidylyltransferase; KEGG: nit:NAL212_0738 3-deoxy-manno-octulosonate cytidylyltransferase; acylneuraminate cytidylyltransferase 592473 10932629 Nit79A3_0552 Nitrosomonas sp. Is79A3 acylneuraminate cytidylyltransferase YP_004693830.1 591724 R 261292 CDS YP_004693831.1 339482045 10932630 592751..594022 1 NC_015731.1 KEGG: nit:NAL212_0739 hypothetical protein; hypothetical protein 594022 10932630 Nit79A3_0553 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693831.1 592751 D 261292 CDS YP_004693832.1 339482046 10932631 594080..594847 1 NC_015731.1 TIGRFAM: Methyltransferase FkbM; KEGG: nit:NAL212_0740 methyltransferase FkbM family; methyltransferase FkbM family 594847 10932631 Nit79A3_0554 Nitrosomonas sp. Is79A3 methyltransferase FkbM family YP_004693832.1 594080 D 261292 CDS YP_004693833.1 339482047 10932632 595068..596183 1 NC_015731.1 PFAM: Glycosyl transferase, family 2; KEGG: nit:NAL212_0741 glycosyl transferase 2; glycosyl transferase 2 596183 10932632 Nit79A3_0555 Nitrosomonas sp. Is79A3 glycosyl transferase 2 YP_004693833.1 595068 D 261292 CDS YP_004693834.1 339482048 10932633 596246..597439 1 NC_015731.1 PFAM: O-antigen ligase-related; KEGG: nit:NAL212_0742 O-antigen polymerase; O-antigen polymerase 597439 10932633 Nit79A3_0556 Nitrosomonas sp. Is79A3 O-antigen polymerase YP_004693834.1 596246 D 261292 CDS YP_004693835.1 339482049 10932634 597447..598418 1 NC_015731.1 PFAM: Methyltransferase type 11; KEGG: nit:NAL212_0744 methyltransferase type 11; type 11 methyltransferase 598418 10932634 Nit79A3_0557 Nitrosomonas sp. Is79A3 type 11 methyltransferase YP_004693835.1 597447 D 261292 CDS YP_004693836.1 339482050 10932635 598457..599140 1 NC_015731.1 PFAM: O-methyltransferase, family 3; KEGG: nit:NAL212_0745 O-methyltransferase 3; O-methyltransferase 3 599140 10932635 Nit79A3_0558 Nitrosomonas sp. Is79A3 O-methyltransferase 3 YP_004693836.1 598457 D 261292 CDS YP_004693837.1 339482051 10932636 599318..599572 1 NC_015731.1 PFAM: Domain of unknown function DUF2024; KEGG: nit:NAL212_0746 hypothetical protein; hypothetical protein 599572 10932636 Nit79A3_0559 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693837.1 599318 D 261292 CDS YP_004693838.1 339482052 10932637 599673..600188 1 NC_015731.1 KEGG: nit:NAL212_0747 hypothetical protein; hypothetical protein 600188 10932637 Nit79A3_0560 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693838.1 599673 D 261292 CDS YP_004693839.1 339482053 10932638 600247..600591 1 NC_015731.1 PFAM: Arsenate reductase-like; KEGG: nit:NAL212_0748 arsenate reductase like protein; arsenate reductase 600591 10932638 Nit79A3_0561 Nitrosomonas sp. Is79A3 arsenate reductase YP_004693839.1 600247 D 261292 CDS YP_004693840.1 339482054 10932639 complement(600679..601098) 1 NC_015731.1 TIGRFAM: Ribosomal protein L19; HAMAP: Ribosomal protein L19; KEGG: nit:NAL212_0749 50S ribosomal protein L19; PFAM: Ribosomal protein L19; 50S ribosomal protein L19 601098 10932639 Nit79A3_0562 Nitrosomonas sp. Is79A3 50S ribosomal protein L19 YP_004693840.1 600679 R 261292 CDS YP_004693841.1 339482055 10932640 complement(601123..601893) 1 NC_015731.1 TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: nit:NAL212_0750 tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase 601893 10932640 Nit79A3_0563 Nitrosomonas sp. Is79A3 tRNA (guanine-N(1)-)-methyltransferase YP_004693841.1 601123 R 261292 CDS YP_004693842.1 339482056 10932641 complement(601905..602408) 1 NC_015731.1 TIGRFAM: 16S rRNA processing protein RimM; HAMAP: 16S rRNA processing protein RimM; KEGG: nit:NAL212_0751 ribosome maturation factor RimM; PFAM: RimM protein; PRC-barrel; Ribosome maturation factor rimM 602408 10932641 Nit79A3_0564 Nitrosomonas sp. Is79A3 Ribosome maturation factor rimM YP_004693842.1 601905 R 261292 CDS YP_004693843.1 339482057 10932642 complement(602440..602706) 1 NC_015731.1 TIGRFAM: Ribosomal protein S16; HAMAP: Ribosomal protein S16; KEGG: nit:NAL212_0752 30S ribosomal protein S16; PFAM: Ribosomal protein S16; 30S ribosomal protein S16 602706 10932642 Nit79A3_0565 Nitrosomonas sp. Is79A3 30S ribosomal protein S16 YP_004693843.1 602440 R 261292 CDS YP_004693844.1 339482058 10932643 602887..604173 1 NC_015731.1 PFAM: Cysteine-rich region, CCG; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: nit:NAL212_0753 hypothetical protein; hypothetical protein 604173 10932643 Nit79A3_0566 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693844.1 602887 D 261292 CDS YP_004693845.1 339482059 10932644 604285..604911 1 NC_015731.1 HAMAP: 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; KEGG: nit:NAL212_0754 ubiquinone biosynthesis family protein; 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 604911 10932644 Nit79A3_0567 Nitrosomonas sp. Is79A3 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_004693845.1 604285 D 261292 CDS YP_004693846.1 339482060 10932645 604990..605553 1 NC_015731.1 KEGG: nit:NAL212_0755 hypothetical protein; HAMAP: Protein of unknown function DUF179; PFAM: Protein of unknown function DUF179; hypothetical protein 605553 10932645 Nit79A3_0568 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693846.1 604990 D 261292 CDS YP_004693847.1 339482061 10932646 605566..606051 1 NC_015731.1 SMART: Resolvase, RNase H-like fold; TIGRFAM: Resolvase, holliday junction-type, YqgF-like; KEGG: nit:NAL212_0756 Holliday junction resolvase YqgF; HAMAP: Holliday junction resolvase; PFAM: Resolvase, holliday junction-type, YqgF-like; Holliday junction resolvase 606051 10932646 Nit79A3_0569 Nitrosomonas sp. Is79A3 Holliday junction resolvase YP_004693847.1 605566 D 261292 CDS YP_004693848.1 339482062 10932647 606032..606538 1 NC_015731.1 PFAM: Phosphoribosyltransferase; KEGG: nit:NAL212_0757 uracil phosphoribosyltransferase; phosphoribosyltransferase 606538 10932647 Nit79A3_0570 Nitrosomonas sp. Is79A3 phosphoribosyltransferase YP_004693848.1 606032 D 261292 CDS YP_004693849.1 339482063 10932648 606535..607494 1 NC_015731.1 TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; HAMAP: Aspartate carbamoyltransferase; KEGG: nit:NAL212_0758 aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate carbamoyltransferase 607494 10932648 Nit79A3_0571 Nitrosomonas sp. Is79A3 aspartate carbamoyltransferase YP_004693849.1 606535 D 261292 CDS YP_004693850.1 339482064 10932649 607505..608779 1 NC_015731.1 KEGG: nit:NAL212_0759 dihydroorotase, multifunctional complex type; TIGRFAM: Dihydroorotase multifunctional complex type; PFAM: Amidohydrolase 3; dihydroorotase, multifunctional complex type 608779 10932649 Nit79A3_0572 Nitrosomonas sp. Is79A3 dihydroorotase, multifunctional complex type YP_004693850.1 607505 D 261292 CDS YP_004693851.1 339482065 10932650 608850..610943 1 NC_015731.1 PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; KEGG: nit:NAL212_0760 oligopeptidase A; peptidase M3A and M3B thimet/oligopeptidase F 610943 10932650 Nit79A3_0573 Nitrosomonas sp. Is79A3 peptidase M3A and M3B thimet/oligopeptidase F YP_004693851.1 608850 D 261292 CDS YP_004693852.1 339482066 10932651 611169..611933 1 NC_015731.1 PFAM: VacJ-like lipoprotein; KEGG: nit:NAL212_0761 VacJ family lipoprotein; VacJ family lipoprotein 611933 10932651 Nit79A3_0574 Nitrosomonas sp. Is79A3 VacJ family lipoprotein YP_004693852.1 611169 D 261292 CDS YP_004693853.1 339482067 10932652 612122..612286 1 NC_015731.1 KEGG: pag:PLES_57451 rubredoxin 2; manually curated; PFAM: Rubredoxin-type Fe(Cys)4 protein; Rubredoxin-type Fe(Cys)4 protein 612286 10932652 Nit79A3_0575 Nitrosomonas sp. Is79A3 Rubredoxin-type Fe(Cys)4 protein YP_004693853.1 612122 D 261292 CDS YP_004693854.1 339482068 10932653 612286..613437 1 NC_015731.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nit:NAL212_0762 rubredoxin--NAD(+) reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 613437 10932653 Nit79A3_0576 Nitrosomonas sp. Is79A3 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004693854.1 612286 D 261292 CDS YP_004693855.1 339482069 10932654 613505..614119 1 NC_015731.1 TIGRFAM: Intracellular septation protein A; HAMAP: Intracellular septation protein A; KEGG: nit:NAL212_0763 intracellular septation protein A; PFAM: Intracellular septation protein A; intracellular septation protein 614119 10932654 Nit79A3_0577 Nitrosomonas sp. Is79A3 intracellular septation protein YP_004693855.1 613505 D 261292 CDS YP_004693856.1 339482070 10932655 614116..614421 1 NC_015731.1 PFAM: YCII-related; KEGG: nmu:Nmul_A2112 YCII-related; hypothetical protein 614421 10932655 Nit79A3_0578 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693856.1 614116 D 261292 CDS YP_004693857.1 339482071 10932656 614586..615380 1 NC_015731.1 PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: nit:NAL212_0765 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 615380 10932656 Nit79A3_0579 Nitrosomonas sp. Is79A3 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004693857.1 614586 D 261292 CDS YP_004693858.1 339482072 10932657 complement(615435..616511) 1 NC_015731.1 TIGRFAM: Alanine racemase; HAMAP: Alanine racemase; KEGG: nit:NAL212_0766 alanine racemase; PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; alanine racemase 616511 10932657 Nit79A3_0580 Nitrosomonas sp. Is79A3 alanine racemase YP_004693858.1 615435 R 261292 CDS YP_004693859.1 339482073 10932658 616774..618048 1 NC_015731.1 PFAM: Major facilitator superfamily MFS-1; KEGG: nit:NAL212_0767 major facilitator superfamily MFS_1; major facilitator superfamily protein 618048 10932658 Nit79A3_0581 Nitrosomonas sp. Is79A3 major facilitator superfamily protein YP_004693859.1 616774 D 261292 CDS YP_004693860.1 339482074 10932659 618313..622524 1 NC_015731.1 KEGG: npu:Npun_F6044 SNF2-related protein; PFAM: SNF2-related; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SNF2-like protein 622524 10932659 Nit79A3_0582 Nitrosomonas sp. Is79A3 SNF2-like protein YP_004693860.1 618313 D 261292 CDS YP_004693861.1 339482075 10932660 622802..623044 1 NC_015731.1 KEGG: neu:NE0262 hypothetical protein; TIGRFAM: addiction module antidote protein, CC2985; PFAM: addiction module antidote protein, CC2985; addiction module antidote protein 623044 10932660 Nit79A3_0583 Nitrosomonas sp. Is79A3 addiction module antidote protein YP_004693861.1 622802 D 261292 CDS YP_004693862.1 339482076 10932661 complement(623173..624162) 1 NC_015731.1 PFAM: EF-Hand domain; KEGG: gca:Galf_2016 EF-Hand, calmodulin; EF hand repeat-containing protein 624162 10932661 Nit79A3_0584 Nitrosomonas sp. Is79A3 EF hand repeat-containing protein YP_004693862.1 623173 R 261292 CDS YP_004693863.1 339482077 10932662 complement(624311..624889) 1 NC_015731.1 KEGG: gca:Galf_2015 hypothetical protein; hypothetical protein 624889 10932662 Nit79A3_0585 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693863.1 624311 R 261292 CDS YP_004693864.1 339482078 10932663 625107..625811 1 NC_015731.1 KEGG: gca:Galf_2014 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator 625811 10932663 Nit79A3_0586 Nitrosomonas sp. Is79A3 winged helix family two component transcriptional regulator YP_004693864.1 625107 D 261292 CDS YP_004693865.1 339482079 10932664 625815..627158 1 NC_015731.1 KEGG: gca:Galf_2013 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 627158 10932664 Nit79A3_0587 Nitrosomonas sp. Is79A3 integral membrane sensor signal transduction histidine kinase YP_004693865.1 625815 D 261292 CDS YP_004693866.1 339482080 10932665 complement(627466..628197) 1 NC_015731.1 KEGG: nit:NAL212_0768 phage SPO1 DNA polymerase-like protein; TIGRFAM: Phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like; phage SPO1 DNA polymerase-like protein 628197 10932665 Nit79A3_0588 Nitrosomonas sp. Is79A3 phage SPO1 DNA polymerase-like protein YP_004693866.1 627466 R 261292 CDS YP_004693867.1 339482081 10932666 complement(628194..628655) 1 NC_015731.1 KEGG: nit:NAL212_0769 ribosomal-protein-alanine acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase 628655 10932666 Nit79A3_0589 Nitrosomonas sp. Is79A3 ribosomal-protein-alanine acetyltransferase YP_004693867.1 628194 R 261292 CDS YP_004693868.1 339482082 10932667 complement(628652..629326) 1 NC_015731.1 KEGG: nit:NAL212_0770 universal protein YeaZ; TIGRFAM: universal protein YeaZ; PFAM: Peptidase M22, glycoprotease; hypothetical protein 629326 10932667 Nit79A3_0590 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693868.1 628652 R 261292 CDS YP_004693869.1 339482083 10932668 complement(629421..629963) 1 NC_015731.1 KEGG: nit:NAL212_0771 2'-5' RNA ligase; TIGRFAM: 2',5' RNA ligase; PFAM: Phosphoesterase, HXTX; 2'-5' RNA ligase 629963 10932668 Nit79A3_0591 Nitrosomonas sp. Is79A3 2'-5' RNA ligase YP_004693869.1 629421 R 261292 CDS YP_004693870.1 339482084 10932669 complement(629956..630453) 1 NC_015731.1 TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; KEGG: nit:NAL212_0772 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 630453 10932669 Nit79A3_0592 Nitrosomonas sp. Is79A3 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_004693870.1 629956 R 261292 CDS YP_004693871.1 339482085 10932670 complement(630450..631154) 1 NC_015731.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; HAMAP: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; KEGG: nit:NAL212_0773 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 631154 10932670 Nit79A3_0593 Nitrosomonas sp. Is79A3 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_004693871.1 630450 R 261292 CDS YP_004693872.1 339482086 10932671 join(631399..631479,631481..632506) 1 NC_015731.1 manually curated; peptide chain releast factor 2 632506 10932671 Nit79A3_0594 Nitrosomonas sp. Is79A3 peptide chain releast factor 2 YP_004693872.1 631399 D 261292 CDS YP_004693873.1 339482087 10932677 638267..639211 1 NC_015731.1 PFAM: Peptidase S49; KEGG: nit:NAL212_0775 peptidase S49; peptidase S49 639211 10932677 Nit79A3_0595 Nitrosomonas sp. Is79A3 peptidase S49 YP_004693873.1 638267 D 261292 CDS YP_004693874.1 339482088 10932678 complement(639322..640218) 1 NC_015731.1 KEGG: nit:NAL212_0783 dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 640218 10932678 Nit79A3_0596 Nitrosomonas sp. Is79A3 dTDP-4-dehydrorhamnose reductase YP_004693874.1 639322 R 261292 CDS YP_004693875.1 339482089 10932679 complement(640218..641273) 1 NC_015731.1 KEGG: nit:NAL212_0784 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase 641273 10932679 Nit79A3_0597 Nitrosomonas sp. Is79A3 dTDP-glucose 4,6-dehydratase YP_004693875.1 640218 R 261292 CDS YP_004693876.1 339482090 10932680 complement(641342..642694) 1 NC_015731.1 TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal; HAMAP: tRNA(Ile)-lysidine synthase; KEGG: nit:NAL212_0785 tRNA(Ile)-lysidine synthetase; PFAM: PP-loop; Lysidine-tRNA(Ile) synthetase, substrate-binding domain; tRNA(Ile)-lysidine synthase 642694 10932680 Nit79A3_0598 Nitrosomonas sp. Is79A3 tRNA(Ile)-lysidine synthase YP_004693876.1 641342 R 261292 CDS YP_004693877.1 339482091 10932681 complement(642663..643631) 1 NC_015731.1 TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; KEGG: nit:NAL212_0786 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 643631 10932681 Nit79A3_0599 Nitrosomonas sp. Is79A3 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha YP_004693877.1 642663 R 261292 CDS YP_004693878.1 339482092 10932682 643825..644349 1 NC_015731.1 KEGG: nit:NAL212_0787 methionine-R-sulfoxide reductase; TIGRFAM: Methionine sulphoxide reductase B; PFAM: Methionine sulphoxide reductase B; methionine-R-sulfoxide reductase 644349 10932682 Nit79A3_0600 Nitrosomonas sp. Is79A3 methionine-R-sulfoxide reductase YP_004693878.1 643825 D 261292 CDS YP_004693879.1 339482093 10932683 644354..645007 1 NC_015731.1 TIGRFAM: Peptide methionine sulphoxide reductase MsrA; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: nit:NAL212_0788 peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA; peptide methionine sulfoxide reductase 645007 10932683 Nit79A3_0601 Nitrosomonas sp. Is79A3 peptide methionine sulfoxide reductase YP_004693879.1 644354 D 261292 CDS YP_004693880.1 339482094 10932684 645018..646142 1 NC_015731.1 KEGG: nit:NAL212_0789 cupin, JmjC-type; PFAM: Cupin 4; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase; cupin 646142 10932684 Nit79A3_0602 Nitrosomonas sp. Is79A3 cupin YP_004693880.1 645018 D 261292 CDS YP_004693881.1 339482095 10932685 646309..646428 1 NC_015731.1 KEGG: nit:NAL212_0406 hypothetical protein; hypothetical protein 646428 10932685 Nit79A3_0603 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693881.1 646309 D 261292 CDS YP_004693882.1 339482096 10932686 646716..646868 1 NC_015731.1 KEGG: nit:NAL212_2773 hypothetical protein; hypothetical protein 646868 10932686 Nit79A3_0604 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693882.1 646716 D 261292 CDS YP_004693883.1 339482097 10932687 647139..647351 1 NC_015731.1 KEGG: nit:NAL212_2774 hypothetical protein; hypothetical protein 647351 10932687 Nit79A3_0605 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693883.1 647139 D 261292 CDS YP_004693884.1 339482098 10932688 complement(647500..648657) 1 NC_015731.1 PFAM: NlpBDapX lipoprotein; KEGG: nit:NAL212_2098 transmembrane protein; NlpBDapX family lipoprotein 648657 10932688 Nit79A3_0606 Nitrosomonas sp. Is79A3 NlpBDapX family lipoprotein YP_004693884.1 647500 R 261292 CDS YP_004693885.1 339482099 10932689 complement(648659..649546) 1 NC_015731.1 TIGRFAM: Dihydrodipicolinate synthase subfamily; HAMAP: Dihydrodipicolinate synthase; KEGG: nit:NAL212_2097 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; Dihydrodipicolinate synthase 649546 10932689 Nit79A3_0607 Nitrosomonas sp. Is79A3 Dihydrodipicolinate synthase YP_004693885.1 648659 R 261292 CDS YP_004693886.1 339482100 10932690 complement(649849..650811) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 650811 10932690 Nit79A3_0608 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004693886.1 649849 R 261292 CDS YP_004693887.1 339482101 10932691 complement(650873..653488) 1 NC_015731.1 TIGRFAM: Chaperonin ClpB; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: nit:NAL212_2096 ATP-dependent chaperone ClpB; SMART: ATPase, AAA+ type, core; ATP-dependent chaperone ClpB 653488 10932691 Nit79A3_0609 Nitrosomonas sp. Is79A3 ATP-dependent chaperone ClpB YP_004693887.1 650873 R 261292 CDS YP_004693888.1 339482102 10932692 complement(653554..656652) 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; KEGG: nit:NAL212_2095 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAC motif; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 656652 10932692 Nit79A3_0610 Nitrosomonas sp. Is79A3 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004693888.1 653554 R 261292 CDS YP_004693889.1 339482103 10932693 complement(656873..658360) 1 NC_015731.1 PFAM: Glutamate synthase, central-C; KEGG: nit:NAL212_2094 glutamate synthase (NADPH); ferredoxin-dependent glutamate synthase 658360 10932693 Nit79A3_0611 Nitrosomonas sp. Is79A3 ferredoxin-dependent glutamate synthase YP_004693889.1 656873 R 261292 CDS YP_004693890.1 339482104 10932694 658504..659367 1 NC_015731.1 KEGG: nit:NAL212_2084 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 659367 10932694 Nit79A3_0612 Nitrosomonas sp. Is79A3 nicotinate-nucleotide pyrophosphorylase YP_004693890.1 658504 D 261292 CDS YP_004693891.1 339482105 10932695 complement(659461..660906) 1 NC_015731.1 PFAM: Tetrapyrrole methylase; Sirohaem synthase, dimerisation domain; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; Sirohaem synthase, N-terminal; HAMAP: Siroheme synthase; KEGG: nit:NAL212_2083 uroporphyrin-III C-methyltransferase; Siroheme synthase 660906 10932695 Nit79A3_0613 Nitrosomonas sp. Is79A3 Siroheme synthase YP_004693891.1 659461 R 261292 CDS YP_004693892.1 339482106 10932696 complement(661068..662066) 1 NC_015731.1 TIGRFAM: Phosphate binding protein; KEGG: nit:NAL212_2082 phosphate binding protein; phosphate binding protein 662066 10932696 Nit79A3_0614 Nitrosomonas sp. Is79A3 phosphate binding protein YP_004693892.1 661068 R 261292 CDS YP_004693893.1 339482107 10932697 complement(662301..663662) 1 NC_015731.1 KEGG: nit:NAL212_2080 phosphoglucosamine mutase; TIGRFAM: Phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; phosphoglucosamine mutase 663662 10932697 Nit79A3_0615 Nitrosomonas sp. Is79A3 phosphoglucosamine mutase YP_004693893.1 662301 R 261292 CDS YP_004693894.1 339482108 10932698 complement(663731..664540) 1 NC_015731.1 KEGG: nit:NAL212_2079 dihydropteroate synthase; TIGRFAM: Dihydropteroate synthase; PFAM: Dihydropteroate synthase, DHPS; dihydropteroate synthase 664540 10932698 Nit79A3_0616 Nitrosomonas sp. Is79A3 dihydropteroate synthase YP_004693894.1 663731 R 261292 CDS YP_004693895.1 339482109 10932699 complement(664641..666554) 1 NC_015731.1 TIGRFAM: Peptidase M41, FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; KEGG: nit:NAL212_2078 ATP-dependent metalloprotease FtsH; SMART: ATPase, AAA+ type, core; ATP-dependent metalloprotease FtsH 666554 10932699 Nit79A3_0617 Nitrosomonas sp. Is79A3 ATP-dependent metalloprotease FtsH YP_004693895.1 664641 R 261292 CDS YP_004693896.1 339482110 10932700 complement(666727..667344) 1 NC_015731.1 KEGG: nit:NAL212_2077 ribosomal RNA methyltransferase RrmJ/FtsJ; HAMAP: Ribosomal RNA large subunit methyltransferase E; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; Ribosomal RNA large subunit methyltransferase E 667344 10932700 Nit79A3_0618 Nitrosomonas sp. Is79A3 Ribosomal RNA large subunit methyltransferase E YP_004693896.1 666727 R 261292 CDS YP_004693897.1 339482111 10932701 667375..667728 1 NC_015731.1 KEGG: nit:NAL212_2076 hypothetical protein; TIGRFAM: RNA-binding, CRM domain, prokaryote; PFAM: RNA-binding, CRM domain; RNA-binding, CRM domain-containing protein 667728 10932701 Nit79A3_0619 Nitrosomonas sp. Is79A3 RNA-binding, CRM domain-containing protein YP_004693897.1 667375 D 261292 CDS YP_004693898.1 339482112 10932702 complement(667750..668226) 1 NC_015731.1 TIGRFAM: Prokaryotic transcription elongation factor GreA; HAMAP: Transcription elongation factor greA; KEGG: nit:NAL212_2075 transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; transcription elongation factor GreA 668226 10932702 Nit79A3_0620 Nitrosomonas sp. Is79A3 transcription elongation factor GreA YP_004693898.1 667750 R 261292 CDS YP_004693899.1 339482113 10932703 complement(668286..671495) 1 NC_015731.1 KEGG: nit:NAL212_2074 carbamoyl-phosphate synthase, large subunit; TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation; MGS-like; carbamoyl-phosphate synthase, large subunit 671495 10932703 Nit79A3_0621 Nitrosomonas sp. Is79A3 carbamoyl-phosphate synthase, large subunit YP_004693899.1 668286 R 261292 CDS YP_004693900.1 339482114 10932704 complement(671543..672697) 1 NC_015731.1 KEGG: nit:NAL212_2073 carbamoyl-phosphate synthase, small subunit; TIGRFAM: Carbamoyl phosphate synthase, small subunit; PFAM: Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal; carbamoyl-phosphate synthase, small subunit 672697 10932704 Nit79A3_0622 Nitrosomonas sp. Is79A3 carbamoyl-phosphate synthase, small subunit YP_004693900.1 671543 R 261292 CDS YP_004693901.1 339482115 10932705 complement(672911..674737) 1 NC_015731.1 KEGG: nit:NAL212_1105 oxaloacetate decarboxylase alpha subunit; TIGRFAM: Oxaloacetate decarboxylase, alpha subunit; PFAM: Conserved carboxylase region; Pyruvate carboxyltransferase; Biotin/lipoyl attachment; oxaloacetate decarboxylase subunit alpha 674737 10932705 Nit79A3_0623 Nitrosomonas sp. Is79A3 oxaloacetate decarboxylase subunit alpha YP_004693901.1 672911 R 261292 CDS YP_004693902.1 339482116 10932706 complement(674771..676192) 1 NC_015731.1 KEGG: nit:NAL212_1106 acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; acetyl-CoA carboxylase, biotin carboxylase 676192 10932706 Nit79A3_0624 Nitrosomonas sp. Is79A3 acetyl-CoA carboxylase, biotin carboxylase YP_004693902.1 674771 R 261292 CDS YP_004693903.1 339482117 10932707 676497..676844 1 NC_015731.1 KEGG: pca:Pcar_3050 hypothetical protein; hypothetical protein 676844 10932707 Nit79A3_0625 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693903.1 676497 D 261292 CDS YP_004693904.1 339482118 10932708 complement(677088..678581) 1 NC_015731.1 PFAM: 5'-Nucleotidase, C-terminal; Metallophosphoesterase; KEGG: ava:Ava_3996 metallophosphoesterase; 5'-nucleotidase 678581 10932708 Nit79A3_0626 Nitrosomonas sp. Is79A3 5'-nucleotidase YP_004693904.1 677088 R 261292 CDS YP_004693905.1 339482119 10932709 679016..681079 1 NC_015731.1 KEGG: nit:NAL212_2775 hypothetical protein; hypothetical protein 681079 10932709 Nit79A3_0627 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693905.1 679016 D 261292 CDS YP_004693906.1 339482120 10932710 681130..682410 1 NC_015731.1 PFAM: Cytochrome P450; KEGG: nit:NAL212_2776 cytochrome P450; cytochrome P450 682410 10932710 Nit79A3_0628 Nitrosomonas sp. Is79A3 cytochrome P450 YP_004693906.1 681130 D 261292 CDS YP_004693907.1 339482121 10932711 complement(682546..682737) 1 NC_015731.1 hypothetical protein 682737 10932711 Nit79A3_0629 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693907.1 682546 R 261292 CDS YP_004693908.1 339482122 10932712 682905..683651 1 NC_015731.1 PFAM: Protein of unknown function DUF82; KEGG: sti:Sthe_2697 protein of unknown function DUF82; hypothetical protein 683651 10932712 Nit79A3_0630 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693908.1 682905 D 261292 CDS YP_004693909.1 339482123 10932713 683885..684976 1 NC_015731.1 KEGG: nit:NAL212_1324 hypothetical protein; hypothetical protein 684976 10932713 Nit79A3_0631 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693909.1 683885 D 261292 CDS YP_004693910.1 339482124 10932714 complement(685071..685511) 1 NC_015731.1 KEGG: tnp:Tnap_1460 DNA-(apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase; DNA-(apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase 685511 10932714 Nit79A3_0632 Nitrosomonas sp. Is79A3 DNA-(apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase YP_004693910.1 685071 R 261292 CDS YP_004693911.1 339482125 10932715 685704..686315 1 NC_015731.1 KEGG: mmb:Mmol_1803 protein of unknown function DUF1555; hypothetical protein 686315 10932715 Nit79A3_0633 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693911.1 685704 D 261292 CDS YP_004693912.1 339482126 10932716 686610..686783 1 NC_015731.1 KEGG: nit:NAL212_2285 hypothetical protein; hypothetical protein 686783 10932716 Nit79A3_0634 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693912.1 686610 D 261292 CDS YP_004693913.1 339482127 10932717 complement(686814..687305) 1 NC_015731.1 TIGRFAM: Peptidase A8, signal peptidase II; HAMAP: Peptidase A8, signal peptidase II; KEGG: nit:NAL212_2286 lipoprotein signal peptidase; PFAM: Peptidase A8, signal peptidase II; lipoprotein signal peptidase 687305 10932717 Nit79A3_0635 Nitrosomonas sp. Is79A3 lipoprotein signal peptidase YP_004693913.1 686814 R 261292 CDS YP_004693914.1 339482128 10932718 complement(687339..690146) 1 NC_015731.1 TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; HAMAP: Isoleucyl-tRNA synthetase; KEGG: nit:NAL212_2287 isoleucyl-tRNA synthetase; Isoleucyl-tRNA synthetase 690146 10932718 Nit79A3_0636 Nitrosomonas sp. Is79A3 Isoleucyl-tRNA synthetase YP_004693914.1 687339 R 261292 CDS YP_004693915.1 339482129 10932719 complement(690188..691141) 1 NC_015731.1 TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: nit:NAL212_2288 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; riboflavin biosynthesis protein RibF 691141 10932719 Nit79A3_0637 Nitrosomonas sp. Is79A3 riboflavin biosynthesis protein RibF YP_004693915.1 690188 R 261292 CDS YP_004693916.1 339482130 10932720 691282..692397 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein 692397 10932720 Nit79A3_0638 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004693916.1 691282 D 261292 CDS YP_004693917.1 339482131 10932721 692564..693166 1 NC_015731.1 KEGG: nit:NAL212_2756 regulatory protein TetR; manually curated; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; TetR family transcriptional regulator 693166 10932721 Nit79A3_0639 Nitrosomonas sp. Is79A3 TetR family transcriptional regulator YP_004693917.1 692564 D 261292 CDS YP_004693918.1 339482132 10932722 complement(693188..693961) 1 NC_015731.1 PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; KEGG: nit:NAL212_2755 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 693961 10932722 Nit79A3_0640 Nitrosomonas sp. Is79A3 UBA/THIF-type NAD/FAD binding protein YP_004693918.1 693188 R 261292 CDS YP_004693919.1 339482133 10932723 complement(693974..695404) 1 NC_015731.1 TIGRFAM: Peptidase S41A, C-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: nit:NAL212_2754 carboxyl-terminal protease; SMART: Peptidase S41; PDZ/DHR/GLGF; carboxyl-terminal protease 695404 10932723 Nit79A3_0641 Nitrosomonas sp. Is79A3 carboxyl-terminal protease YP_004693919.1 693974 R 261292 CDS YP_004693920.1 339482134 10932724 complement(695451..696695) 1 NC_015731.1 PFAM: Peptidase M23; KEGG: nit:NAL212_2753 peptidase M23; peptidase M23 696695 10932724 Nit79A3_0642 Nitrosomonas sp. Is79A3 peptidase M23 YP_004693920.1 695451 R 261292 CDS YP_004693921.1 339482135 10932725 complement(696722..697471) 1 NC_015731.1 TIGRFAM: Phosphoglycerate mutase 1; HAMAP: Phosphoglycerate mutase 1; KEGG: nit:NAL212_2752 phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 697471 10932725 Nit79A3_0643 Nitrosomonas sp. Is79A3 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_004693921.1 696722 R 261292 CDS YP_004693922.1 339482136 10932726 697808..698242 1 NC_015731.1 KEGG: nit:NAL212_2157 rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; Rhodanese-like protein 698242 10932726 Nit79A3_0644 Nitrosomonas sp. Is79A3 Rhodanese-like protein YP_004693922.1 697808 D 261292 CDS YP_004693923.1 339482137 10932727 698251..698508 1 NC_015731.1 KEGG: nit:NAL212_2156 glutaredoxin 3; TIGRFAM: Glutaredoxin, GrxC; PFAM: Glutaredoxin; glutaredoxin 3 698508 10932727 Nit79A3_0645 Nitrosomonas sp. Is79A3 glutaredoxin 3 YP_004693923.1 698251 D 261292 CDS YP_004693924.1 339482138 10932728 698582..699019 1 NC_015731.1 TIGRFAM: Bacterial protein export chaperone SecB; HAMAP: Bacterial protein export chaperone SecB; KEGG: nit:NAL212_2155 protein-export protein SecB; PFAM: Bacterial protein export chaperone SecB; Protein-export protein secB 699019 10932728 Nit79A3_0646 Nitrosomonas sp. Is79A3 Protein-export protein secB YP_004693924.1 698582 D 261292 CDS YP_004693925.1 339482139 10932729 699058..699540 1 NC_015731.1 PFAM: Protein of unknown function DUF1058; KEGG: nit:NAL212_2154 hypothetical protein; hypothetical protein 699540 10932729 Nit79A3_0647 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693925.1 699058 D 261292 CDS YP_004693926.1 339482140 10932730 699537..700529 1 NC_015731.1 KEGG: nit:NAL212_2153 NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein; HAMAP: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; Glycerol-3-phosphate dehydrogenase (NAD(P)+) 700529 10932730 Nit79A3_0648 Nitrosomonas sp. Is79A3 Glycerol-3-phosphate dehydrogenase (NAD(P)+) YP_004693926.1 699537 D 261292 CDS YP_004693927.1 339482141 10932731 700767..701039 1 NC_015731.1 KEGG: nit:NAL212_2152 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; histone family protein DNA-binding protein 701039 10932731 Nit79A3_0649 Nitrosomonas sp. Is79A3 histone family protein DNA-binding protein YP_004693927.1 700767 D 261292 CDS YP_004693928.1 339482142 10932734 701316..703199 1 NC_015731.1 PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; KEGG: nit:NAL212_2151 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 703199 10932734 Nit79A3_0650 Nitrosomonas sp. Is79A3 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004693928.1 701316 D 261292 CDS YP_004693929.1 339482143 10932735 complement(703249..704034) 1 NC_015731.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nit:NAL212_2150 enoyl-(acyl-carrier-protein) reductase (NADH); short-chain dehydrogenase/reductase SDR 704034 10932735 Nit79A3_0651 Nitrosomonas sp. Is79A3 short-chain dehydrogenase/reductase SDR YP_004693929.1 703249 R 261292 CDS YP_004693930.1 339482144 10932736 704189..706366 1 NC_015731.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: nit:NAL212_2149 ABC-type transporter, periplasmic subunit; ABC transporter substrate-binding protein 706366 10932736 Nit79A3_0652 Nitrosomonas sp. Is79A3 ABC transporter substrate-binding protein YP_004693930.1 704189 D 261292 CDS YP_004693931.1 339482145 10932737 706388..707365 1 NC_015731.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: nit:NAL212_2148 ABC-type transporter, integral membrane subunit; ABC transporter permease 707365 10932737 Nit79A3_0653 Nitrosomonas sp. Is79A3 ABC transporter permease YP_004693931.1 706388 D 261292 CDS YP_004693932.1 339482146 10932738 707601..710279 1 NC_015731.1 PFAM: CoA-binding; GCN5-related N-acetyltransferase; KEGG: gca:Galf_1381 CoA-binding domain-containing protein; CoA-binding domain-containing protein 710279 10932738 Nit79A3_0654 Nitrosomonas sp. Is79A3 CoA-binding domain-containing protein YP_004693932.1 707601 D 261292 CDS YP_004693933.1 339482147 10932739 710337..711260 1 NC_015731.1 PFAM: Histone deacetylase superfamily; KEGG: gca:Galf_1380 histone deacetylase superfamily; histone deacetylase superfamily protein 711260 10932739 Nit79A3_0655 Nitrosomonas sp. Is79A3 histone deacetylase superfamily protein YP_004693933.1 710337 D 261292 CDS YP_004693934.1 339482148 10932740 complement(711257..711409) 1 NC_015731.1 hypothetical protein 711409 10932740 Nit79A3_0656 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693934.1 711257 R 261292 CDS YP_004693935.1 339482149 10932741 711478..711954 1 NC_015731.1 KEGG: nit:NAL212_1598 phenylacetic acid degradation-like protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily; phenylacetic acid degradation-like protein 711954 10932741 Nit79A3_0657 Nitrosomonas sp. Is79A3 phenylacetic acid degradation-like protein YP_004693935.1 711478 D 261292 CDS YP_004693936.1 339482150 10932742 complement(712050..712511) 1 NC_015731.1 KEGG: nit:NAL212_1599 hypothetical protein; hypothetical protein 712511 10932742 Nit79A3_0658 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693936.1 712050 R 261292 CDS YP_004693937.1 339482151 10932743 complement(712670..713254) 1 NC_015731.1 KEGG: afe:Lferr_0145 transposase; hypothetical protein 713254 10932743 Nit79A3_0659 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693937.1 712670 R 261292 CDS YP_004693938.1 339482152 10932744 complement(713227..713730) 1 NC_015731.1 KEGG: afe:Lferr_0146 hypothetical protein; hypothetical protein 713730 10932744 Nit79A3_0660 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693938.1 713227 R 261292 CDS YP_004693939.1 339482153 10932745 714058..715413 1 NC_015731.1 KEGG: nit:NAL212_1600 hypothetical protein; hypothetical protein 715413 10932745 Nit79A3_0661 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693939.1 714058 D 261292 CDS YP_004693940.1 339482154 10932746 complement(715421..716800) 1 NC_015731.1 KEGG: nit:NAL212_1602 L-serine dehydratase 1; TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; L-serine dehydratase 1 716800 10932746 Nit79A3_0662 Nitrosomonas sp. Is79A3 L-serine dehydratase 1 YP_004693940.1 715421 R 261292 CDS YP_004693941.1 339482155 10932747 717215..720544 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; PAS fold-4; PAS fold; KEGG: slt:Slit_0879 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 720544 10932747 Nit79A3_0663 Nitrosomonas sp. Is79A3 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004693941.1 717215 D 261292 CDS YP_004693942.1 339482156 10932748 complement(720691..721356) 1 NC_015731.1 TIGRFAM: thiopurine S-methyltransferase, Se/Te detoxification family; HAMAP: Thiopurine S-methyltransferase; KEGG: nmu:Nmul_A2259 thiopurine S-methyltransferase; PFAM: Thiopurine S-methyltransferase; thiopurine S-methyltransferase 721356 10932748 Nit79A3_0664 Nitrosomonas sp. Is79A3 thiopurine S-methyltransferase YP_004693942.1 720691 R 261292 CDS YP_004693943.1 339482157 10932749 complement(721356..723173) 1 NC_015731.1 KEGG: nit:NAL212_0207 allophanate hydrolase; TIGRFAM: Allophanate hydrolase; PFAM: Amidase; allophanate hydrolase 723173 10932749 Nit79A3_0665 Nitrosomonas sp. Is79A3 allophanate hydrolase YP_004693943.1 721356 R 261292 CDS YP_004693944.1 339482158 10932750 complement(723176..726802) 1 NC_015731.1 TIGRFAM: Urea carboxylase; Allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; KEGG: nit:NAL212_0208 UreA carboxylase; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; urea carboxylase 726802 10932750 Nit79A3_0666 Nitrosomonas sp. Is79A3 urea carboxylase YP_004693944.1 723176 R 261292 CDS YP_004693945.1 339482159 10932751 complement(726866..727531) 1 NC_015731.1 KEGG: nmu:Nmul_A0942 hypothetical protein; TIGRFAM: Urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989; urea carboxylase 727531 10932751 Nit79A3_0667 Nitrosomonas sp. Is79A3 urea carboxylase YP_004693945.1 726866 R 261292 CDS YP_004693946.1 339482160 10932752 complement(727528..728253) 1 NC_015731.1 KEGG: nit:NAL212_0210 UreA carboxylase-associated protein 2; TIGRFAM: Urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989; urea carboxylase 728253 10932752 Nit79A3_0668 Nitrosomonas sp. Is79A3 urea carboxylase YP_004693946.1 727528 R 261292 CDS YP_004693947.1 339482161 10932753 complement(728279..729715) 1 NC_015731.1 PFAM: Amino acid permease-associated region; KEGG: nit:NAL212_0211 amino acid permease-associated region; amino acid permease 729715 10932753 Nit79A3_0669 Nitrosomonas sp. Is79A3 amino acid permease YP_004693947.1 728279 R 261292 CDS YP_004693948.1 339482162 10932754 730218..730826 1 NC_015731.1 hypothetical protein 730826 10932754 Nit79A3_0670 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693948.1 730218 D 261292 CDS YP_004693949.1 339482163 10932755 complement(731040..731294) 1 NC_015731.1 KEGG: nwa:Nwat_2514 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 731294 10932755 Nit79A3_0671 Nitrosomonas sp. Is79A3 helix-turn-helix domain-containing protein YP_004693949.1 731040 R 261292 CDS YP_004693950.1 339482164 10932756 complement(731517..732053) 1 NC_015731.1 KEGG: nit:NAL212_0298 hypothetical protein; hypothetical protein 732053 10932756 Nit79A3_0672 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693950.1 731517 R 261292 CDS YP_004693951.1 339482165 10932757 732459..733676 1 NC_015731.1 PFAM: Aminotransferase, class V/Cysteine desulfurase; KEGG: nit:NAL212_0299 serine--pyruvate transaminase; class V aminotransferase 733676 10932757 Nit79A3_0673 Nitrosomonas sp. Is79A3 class V aminotransferase YP_004693951.1 732459 D 261292 CDS YP_004693952.1 339482166 10932758 733790..734782 1 NC_015731.1 PFAM: Glycosyl transferase, family 4, conserved region; KEGG: nit:NAL212_0300 glycosyl transferase 4; glycosyltransferase 734782 10932758 Nit79A3_0674 Nitrosomonas sp. Is79A3 glycosyltransferase YP_004693952.1 733790 D 261292 CDS YP_004693953.1 339482167 10932759 734784..736673 1 NC_015731.1 PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: nit:NAL212_0301 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD 736673 10932759 Nit79A3_0675 Nitrosomonas sp. Is79A3 polysaccharide biosynthesis protein CapD YP_004693953.1 734784 D 261292 CDS YP_004693954.1 339482168 10932760 complement(736716..738431) 1 NC_015731.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: nit:NAL212_0302 xenobiotic-transporting ATPase; ABC transporter 738431 10932760 Nit79A3_0676 Nitrosomonas sp. Is79A3 ABC transporter YP_004693954.1 736716 R 261292 CDS YP_004693955.1 339482169 10932761 738584..739516 1 NC_015731.1 KEGG: nit:NAL212_0303 glucose-1-phosphate thymidylyltransferase; TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase 739516 10932761 Nit79A3_0677 Nitrosomonas sp. Is79A3 glucose-1-phosphate thymidylyltransferase YP_004693955.1 738584 D 261292 CDS YP_004693956.1 339482170 10932762 739530..740078 1 NC_015731.1 KEGG: nit:NAL212_0304 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 740078 10932762 Nit79A3_0678 Nitrosomonas sp. Is79A3 dTDP-4-dehydrorhamnose 3,5-epimerase YP_004693956.1 739530 D 261292 CDS YP_004693957.1 339482171 10932763 740089..741438 1 NC_015731.1 KEGG: nit:NAL212_0305 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: ATPase, AAA+ type, core; DNA repair protein RadA 741438 10932763 Nit79A3_0679 Nitrosomonas sp. Is79A3 DNA repair protein RadA YP_004693957.1 740089 D 261292 CDS YP_004693958.1 339482172 10932764 741511..742296 1 NC_015731.1 KEGG: nit:NAL212_0306 alkaline phytoceramidase; alkaline phytoceramidase 742296 10932764 Nit79A3_0680 Nitrosomonas sp. Is79A3 alkaline phytoceramidase YP_004693958.1 741511 D 261292 CDS YP_004693959.1 339482173 10932765 complement(742328..742870) 1 NC_015731.1 KEGG: pph:Ppha_2274 hypothetical protein; hypothetical protein 742870 10932765 Nit79A3_0681 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693959.1 742328 R 261292 CDS YP_004693960.1 339482174 10932766 complement(742969..744351) 1 NC_015731.1 KEGG: nit:NAL212_2812 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 744351 10932766 Nit79A3_0682 Nitrosomonas sp. Is79A3 DEAD/DEAH box helicase domain-containing protein YP_004693960.1 742969 R 261292 CDS YP_004693961.1 339482175 10932767 complement(744690..745892) 1 NC_015731.1 SMART: RNA-binding S4; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; KEGG: nit:NAL212_2811 tyrosyl-tRNA synthetase; HAMAP: Tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; RNA-binding S4; Tyrosyl-tRNA synthetase 745892 10932767 Nit79A3_0683 Nitrosomonas sp. Is79A3 Tyrosyl-tRNA synthetase YP_004693961.1 744690 R 261292 CDS YP_004693962.1 339482176 10932768 746046..747380 1 NC_015731.1 PFAM: Peptidase M23; KEGG: nit:NAL212_2810 peptidase M23; peptidase M23 747380 10932768 Nit79A3_0684 Nitrosomonas sp. Is79A3 peptidase M23 YP_004693962.1 746046 D 261292 CDS YP_004693963.1 339482177 10932769 747509..748582 1 NC_015731.1 KEGG: nit:NAL212_2809 hypothetical protein; HAMAP: Anhydro-N-acetylmuramic acid kinase; PFAM: Anhydro-N-acetylmuramic acid kinase; Anhydro-N-acetylmuramic acid kinase 748582 10932769 Nit79A3_0685 Nitrosomonas sp. Is79A3 Anhydro-N-acetylmuramic acid kinase YP_004693963.1 747509 D 261292 CDS YP_004693964.1 339482178 10932770 complement(748610..748954) 1 NC_015731.1 TIGRFAM: FeS cluster insertion; HAMAP: Iron--sulfur cluster insertion protein erpA; KEGG: nit:NAL212_2808 iron-sulfur cluster assembly accessory protein; PFAM: FeS cluster biogenesis; Iron--sulfur cluster insertion protein erpA 748954 10932770 Nit79A3_0686 Nitrosomonas sp. Is79A3 Iron--sulfur cluster insertion protein erpA YP_004693964.1 748610 R 261292 CDS YP_004693965.1 339482179 10932771 complement(749036..749497) 1 NC_015731.1 PFAM: Protein of unknown function DUF583; KEGG: nit:NAL212_2807 hypothetical protein; hypothetical protein 749497 10932771 Nit79A3_0687 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693965.1 749036 R 261292 CDS YP_004693966.1 339482180 10932772 complement(749510..750244) 1 NC_015731.1 KEGG: nit:NAL212_2806 hypothetical protein; hypothetical protein 750244 10932772 Nit79A3_0688 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693966.1 749510 R 261292 CDS YP_004693967.1 339482181 10932773 complement(750370..751398) 1 NC_015731.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: nit:NAL212_2805 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase 751398 10932773 Nit79A3_0689 Nitrosomonas sp. Is79A3 N-acetyl-gamma-glutamyl-phosphate reductase YP_004693967.1 750370 R 261292 CDS YP_004693968.1 339482182 10932774 complement(751506..751898) 1 NC_015731.1 PFAM: Ribosomal protein S9; KEGG: nit:NAL212_2804 30S ribosomal protein S9; 30S ribosomal protein S9 751898 10932774 Nit79A3_0690 Nitrosomonas sp. Is79A3 30S ribosomal protein S9 YP_004693968.1 751506 R 261292 CDS YP_004693969.1 339482183 10932775 complement(751902..752336) 1 NC_015731.1 KEGG: nit:NAL212_2803 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13; 50S ribosomal protein L13 752336 10932775 Nit79A3_0691 Nitrosomonas sp. Is79A3 50S ribosomal protein L13 YP_004693969.1 751902 R 261292 CDS YP_004693970.1 339482184 10932776 752579..754333 1 NC_015731.1 TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; HAMAP: Glutaminyl-tRNA synthetase; KEGG: nit:NAL212_2802 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; Glutaminyl-tRNA synthetase 754333 10932776 Nit79A3_0692 Nitrosomonas sp. Is79A3 Glutaminyl-tRNA synthetase YP_004693970.1 752579 D 261292 CDS YP_004693971.1 339482185 10932777 754326..754703 1 NC_015731.1 PFAM: Nucleotidyltransferase; KEGG: neu:NE2231 hypothetical protein; DNA polymerase beta domain-containing protein 754703 10932777 Nit79A3_0693 Nitrosomonas sp. Is79A3 DNA polymerase beta domain-containing protein YP_004693971.1 754326 D 261292 CDS YP_004693972.1 339482186 10932778 754691..755107 1 NC_015731.1 PFAM: Protein of unknown function DUF86; KEGG: pph:Ppha_1588 protein of unknown function DUF86; hypothetical protein 755107 10932778 Nit79A3_0694 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693972.1 754691 D 261292 CDS YP_004693973.1 339482187 10932779 755185..755445 1 NC_015731.1 KEGG: slt:Slit_1337 hypothetical protein; hypothetical protein 755445 10932779 Nit79A3_0695 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693973.1 755185 D 261292 CDS YP_004693974.1 339482188 10932780 complement(755523..756263) 1 NC_015731.1 KEGG: vex:VEA_003227 hypothetical protein; hypothetical protein 756263 10932780 Nit79A3_0696 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693974.1 755523 R 261292 CDS YP_004693975.1 339482189 10932781 756967..759303 1 NC_015731.1 KEGG: bid:Bind_1249 TPR repeat-containing protein; hypothetical protein 759303 10932781 Nit79A3_0697 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693975.1 756967 D 261292 CDS YP_004693976.1 339482190 10932782 complement(759429..761657) 1 NC_015731.1 KEGG: nit:NAL212_1762 Tex-like protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; SMART: Resolvase, RNase H-like fold; Tex-like protein 761657 10932782 Nit79A3_0698 Nitrosomonas sp. Is79A3 Tex-like protein YP_004693976.1 759429 R 261292 CDS YP_004693977.1 339482191 10932783 complement(761739..762077) 1 NC_015731.1 KEGG: nit:NAL212_1761 hypothetical protein; hypothetical protein 762077 10932783 Nit79A3_0699 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693977.1 761739 R 261292 CDS YP_004693978.1 339482192 10932784 762123..763010 1 NC_015731.1 PFAM: exonuclease, RdgC; KEGG: nit:NAL212_1760 exonuclease RdgC; exonuclease RdgC 763010 10932784 Nit79A3_0700 Nitrosomonas sp. Is79A3 exonuclease RdgC YP_004693978.1 762123 D 261292 CDS YP_004693979.1 339482193 10932785 complement(763026..763709) 1 NC_015731.1 KEGG: nit:NAL212_1759 hypothetical protein; hypothetical protein 763709 10932785 Nit79A3_0701 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693979.1 763026 R 261292 CDS YP_004693980.1 339482194 10932786 complement(763749..765065) 1 NC_015731.1 TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase; KEGG: nit:NAL212_1758 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; Seryl-tRNA synthetase 765065 10932786 Nit79A3_0702 Nitrosomonas sp. Is79A3 Seryl-tRNA synthetase YP_004693980.1 763749 R 261292 CDS YP_004693981.1 339482195 10932787 complement(765154..766488) 1 NC_015731.1 KEGG: nit:NAL212_1757 MgsA AAA+ ATPase domain-containing protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; ATPase AAA 766488 10932787 Nit79A3_0703 Nitrosomonas sp. Is79A3 ATPase AAA YP_004693981.1 765154 R 261292 CDS YP_004693982.1 339482196 10932788 complement(766466..767092) 1 NC_015731.1 TIGRFAM: Outer membrane lipoprotein carrier protein LolA, Proteobacteria; HAMAP: Outer membrane lipoprotein carrier protein LolA, Proteobacteria; KEGG: nit:NAL212_1756 outer membrane lipoprotein carrier protein LolA; PFAM: Outer membrane lipoprotein carrier protein LolA; Outer-membrane lipoprotein carrier protein 767092 10932788 Nit79A3_0704 Nitrosomonas sp. Is79A3 Outer-membrane lipoprotein carrier protein YP_004693982.1 766466 R 261292 CDS YP_004693983.1 339482197 10932789 complement(767149..769443) 1 NC_015731.1 KEGG: nit:NAL212_1755 cell division protein FtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: ATPase, AAA+ type, core; DNA translocase FtsK 769443 10932789 Nit79A3_0705 Nitrosomonas sp. Is79A3 DNA translocase FtsK YP_004693983.1 767149 R 261292 CDS YP_004693984.1 339482198 10932790 complement(769646..770575) 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: nit:NAL212_1754 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 770575 10932790 Nit79A3_0706 Nitrosomonas sp. Is79A3 diguanylate cyclase YP_004693984.1 769646 R 261292 CDS YP_004693985.1 339482199 10932791 complement(770796..771212) 1 NC_015731.1 PFAM: RDD; KEGG: nit:NAL212_1753 RDD domain containing protein; RDD domain containing protein 771212 10932791 Nit79A3_0707 Nitrosomonas sp. Is79A3 RDD domain containing protein YP_004693985.1 770796 R 261292 CDS YP_004693986.1 339482200 10932792 771507..772202 1 NC_015731.1 KEGG: nit:NAL212_1752 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein; TonB family protein 772202 10932792 Nit79A3_0708 Nitrosomonas sp. Is79A3 TonB family protein YP_004693986.1 771507 D 261292 CDS YP_004693987.1 339482201 10932793 772206..772964 1 NC_015731.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: nit:NAL212_1751 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 772964 10932793 Nit79A3_0709 Nitrosomonas sp. Is79A3 MotA/TolQ/ExbB proton channel YP_004693987.1 772206 D 261292 CDS YP_004693988.1 339482202 10932794 772964..773383 1 NC_015731.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: nit:NAL212_1750 biopolymer transport protein ExbD/TolR; Biopolymer transport protein ExbD/TolR 773383 10932794 Nit79A3_0710 Nitrosomonas sp. Is79A3 Biopolymer transport protein ExbD/TolR YP_004693988.1 772964 D 261292 CDS YP_004693989.1 339482203 10932795 773983..774207 1 NC_015731.1 PFAM: BFD-like [2Fe-2S]-binding region; KEGG: nit:NAL212_1603 BFD domain-containing protein (2Fe-2S)-binding domain-containing protein; BFD domain-containing protein (2Fe-2S)-binding domain-containing protein 774207 10932795 Nit79A3_0711 Nitrosomonas sp. Is79A3 BFD domain-containing protein (2Fe-2S)-binding domain-containing protein YP_004693989.1 773983 D 261292 CDS YP_004693990.1 339482204 10932796 774510..776909 1 NC_015731.1 KEGG: nit:NAL212_1604 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent siderophore receptor 776909 10932796 Nit79A3_0712 Nitrosomonas sp. Is79A3 TonB-dependent siderophore receptor YP_004693990.1 774510 D 261292 CDS YP_004693991.1 339482205 10932797 777013..779283 1 NC_015731.1 KEGG: nit:NAL212_1605 hypothetical protein; hypothetical protein 779283 10932797 Nit79A3_0713 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693991.1 777013 D 261292 CDS YP_004693992.1 339482206 10932798 779544..780629 1 NC_015731.1 PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; KEGG: tgu:100223630 similar to hephaestin; multicopper oxidase type 2 780629 10932798 Nit79A3_0714 Nitrosomonas sp. Is79A3 multicopper oxidase type 2 YP_004693992.1 779544 D 261292 CDS YP_004693993.1 339482207 10932799 complement(780704..781303) 1 NC_015731.1 PFAM: Haemolysin-type calcium-binding region; KEGG: nit:NAL212_1036 hemolysin-type calcium-binding toxin; Hemolysin-type calcium-binding protein 781303 10932799 Nit79A3_0715 Nitrosomonas sp. Is79A3 Hemolysin-type calcium-binding protein YP_004693993.1 780704 R 261292 CDS YP_004693994.1 339482208 10932800 781458..783017 1 NC_015731.1 KEGG: nit:NAL212_1037 cytidyltransferase-related domain-containing protein; TIGRFAM: Cytidyltransferase-related; PFAM: Cytidylyltransferase; LicD-like; cytidyltransferase-related domain-containing protein 783017 10932800 Nit79A3_0716 Nitrosomonas sp. Is79A3 cytidyltransferase-related domain-containing protein YP_004693994.1 781458 D 261292 CDS YP_004693995.1 339482209 10932802 complement(784440..786269) 1 NC_015731.1 TIGRFAM: PAS; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold; Helix-turn-helix, Fis-type; KEGG: azc:AZC_0759 transcriptional regulator; SMART: ATPase, AAA+ type, core; PAS; Fis family transcriptional regulator 786269 10932802 Nit79A3_0718 Nitrosomonas sp. Is79A3 Fis family transcriptional regulator YP_004693995.1 784440 R 261292 CDS YP_004693996.1 339482210 10932803 786557..788263 1 NC_015731.1 KEGG: nit:NAL212_1516 hypothetical protein; hypothetical protein 788263 10932803 Nit79A3_0719 Nitrosomonas sp. Is79A3 hypothetical protein YP_004693996.1 786557 D 261292 CDS YP_004693997.1 339482211 10932804 788383..789102 1 NC_015731.1 KEGG: nit:NAL212_2582 cytochrome c class I; cytochrome c class I 789102 10932804 Nit79A3_0720 Nitrosomonas sp. Is79A3 cytochrome c class I YP_004693997.1 788383 D 261292 CDS YP_004693998.1 339482212 10932805 789099..790391 1 NC_015731.1 PFAM: Cytochrome c, class I; KEGG: nit:NAL212_2581 gluconate 2-dehydrogenase (acceptor); cytochrome c class I 790391 10932805 Nit79A3_0721 Nitrosomonas sp. Is79A3 cytochrome c class I YP_004693998.1 789099 D 261292 CDS YP_004693999.1 339482213 10932807 complement(790657..791814) 1 NC_015731.1 KEGG: nit:NAL212_1790 peptidase S1 and S6 chymotrypsin/Hap; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF; peptidase S1 and S6 chymotrypsin/Hap 791814 10932807 Nit79A3_0723 Nitrosomonas sp. Is79A3 peptidase S1 and S6 chymotrypsin/Hap YP_004693999.1 790657 R 261292 CDS YP_004694000.1 339482214 10932808 complement(791842..792273) 1 NC_015731.1 KEGG: nit:NAL212_1789 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin 792273 10932808 Nit79A3_0724 Nitrosomonas sp. Is79A3 thioredoxin YP_004694000.1 791842 R 261292 CDS YP_004694001.1 339482215 10932809 complement(792317..792634) 1 NC_015731.1 KEGG: nit:NAL212_1788 MerR family transcriptional regulator; MerR family transcriptional regulator 792634 10932809 Nit79A3_0725 Nitrosomonas sp. Is79A3 MerR family transcriptional regulator YP_004694001.1 792317 R 261292 CDS YP_004694002.1 339482216 10932810 complement(792638..793585) 1 NC_015731.1 KEGG: nit:NAL212_1787 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; Chaperone DnaJ, C-terminal; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 793585 10932810 Nit79A3_0726 Nitrosomonas sp. Is79A3 molecular chaperone DnaJ YP_004694002.1 792638 R 261292 CDS YP_004694003.1 339482217 10932811 complement(793753..794925) 1 NC_015731.1 PFAM: Protein of unknown function DUF839, bacterial; KEGG: nit:NAL212_0846 hypothetical protein; hypothetical protein 794925 10932811 Nit79A3_0727 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694003.1 793753 R 261292 CDS YP_004694004.1 339482218 10932812 795146..795532 1 NC_015731.1 KEGG: nit:NAL212_0845 ABC drug efflux pump, inner membrane subunit, DrrB family; multidrug ABC transporter permease 795532 10932812 Nit79A3_0728 Nitrosomonas sp. Is79A3 multidrug ABC transporter permease YP_004694004.1 795146 D 261292 CDS YP_004694005.1 339482219 10932813 complement(795736..796263) 1 NC_015731.1 KEGG: meh:M301_2279 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 796263 10932813 Nit79A3_0729 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004694005.1 795736 R 261292 CDS YP_004694006.1 339482220 10932814 complement(796870..798822) 1 NC_015731.1 PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; KEGG: sur:STAUR_6102 multicopper oxidase; multicopper oxidase type 3 798822 10932814 Nit79A3_0730 Nitrosomonas sp. Is79A3 multicopper oxidase type 3 YP_004694006.1 796870 R 261292 CDS YP_004694007.1 339482221 10932815 complement(799052..800023) 1 NC_015731.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: nit:NAL212_0843 metal dependent phosphohydrolase; signal transduction protein 800023 10932815 Nit79A3_0731 Nitrosomonas sp. Is79A3 signal transduction protein YP_004694007.1 799052 R 261292 CDS YP_004694008.1 339482222 10932816 complement(800555..802174) 1 NC_015731.1 PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; KEGG: nit:NAL212_2028 bilirubin oxidase; multicopper oxidase type 3 802174 10932816 Nit79A3_0732 Nitrosomonas sp. Is79A3 multicopper oxidase type 3 YP_004694008.1 800555 R 261292 CDS YP_004694009.1 339482223 10932818 complement(803017..803979) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 803979 10932818 Nit79A3_0734 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694009.1 803017 R 261292 CDS YP_004694010.1 339482224 10932819 803992..804687 1 NC_015731.1 manually curated; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: mgm:Mmc1_3408 response regulator receiver modulated metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 804687 10932819 Nit79A3_0735 Nitrosomonas sp. Is79A3 metal dependent phosphohydrolase YP_004694010.1 803992 D 261292 CDS YP_004694011.1 339482225 10932820 complement(804696..805781) 1 NC_015731.1 PFAM: aminopeptidase; KEGG: nit:NAL212_1614 aminopeptidase; aminopeptidase 805781 10932820 Nit79A3_0736 Nitrosomonas sp. Is79A3 aminopeptidase YP_004694011.1 804696 R 261292 CDS YP_004694012.1 339482226 10932821 806161..806511 1 NC_015731.1 KEGG: nit:NAL212_0951 hypothetical protein; hypothetical protein 806511 10932821 Nit79A3_0737 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694012.1 806161 D 261292 CDS YP_004694013.1 339482227 10932822 complement(806603..808678) 1 NC_015731.1 KEGG: nit:NAL212_0950 hypothetical protein; hypothetical protein 808678 10932822 Nit79A3_0738 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694013.1 806603 R 261292 CDS YP_004694014.1 339482228 10932823 808900..810168 1 NC_015731.1 PFAM: Outer membrane efflux protein; KEGG: nit:NAL212_0949 outer membrane efflux protein; outer membrane efflux protein 810168 10932823 Nit79A3_0739 Nitrosomonas sp. Is79A3 outer membrane efflux protein YP_004694014.1 808900 D 261292 CDS YP_004694015.1 339482229 10932824 810165..811319 1 NC_015731.1 KEGG: nit:NAL212_0948 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 811319 10932824 Nit79A3_0740 Nitrosomonas sp. Is79A3 RND family efflux transporter MFP subunit YP_004694015.1 810165 D 261292 CDS YP_004694016.1 339482230 10932825 811323..814508 1 NC_015731.1 KEGG: nit:NAL212_0947 heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; CzcA family heavy metal efflux pump 814508 10932825 Nit79A3_0741 Nitrosomonas sp. Is79A3 CzcA family heavy metal efflux pump YP_004694016.1 811323 D 261292 CDS YP_004694017.1 339482231 10932826 complement(814610..815869) 1 NC_015731.1 PFAM: Protein of unknown function DUF1504; KEGG: pna:Pnap_2982 hypothetical protein; hypothetical protein 815869 10932826 Nit79A3_0742 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694017.1 814610 R 261292 CDS YP_004694018.1 339482232 10932827 complement(815984..816712) 1 NC_015731.1 PFAM: Protein of unknown function DUF1499; KEGG: nit:NAL212_1958 hypothetical protein; hypothetical protein 816712 10932827 Nit79A3_0743 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694018.1 815984 R 261292 CDS YP_004694019.1 339482233 10932828 816962..818668 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Diverse 7TM receptor, transmembrane region; Diverse 7TM receptor, extracellular region 2; KEGG: nit:NAL212_1843 periplasmic/7TM domain sensor diguanylate cyclase; SMART: Diguanylate cyclase, predicted; periplasmic/7TM domain sensor diguanylate cyclase 818668 10932828 Nit79A3_0744 Nitrosomonas sp. Is79A3 periplasmic/7TM domain sensor diguanylate cyclase YP_004694019.1 816962 D 261292 CDS YP_004694020.1 339482234 10932829 complement(818685..818879) 1 NC_015731.1 KEGG: nit:NAL212_1844 hypothetical protein; hypothetical protein 818879 10932829 Nit79A3_0745 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694020.1 818685 R 261292 CDS YP_004694021.1 339482235 10932830 818933..819094 1 NC_015731.1 hypothetical protein 819094 10932830 Nit79A3_0746 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694021.1 818933 D 261292 CDS YP_004694022.1 339482236 10932831 819300..819779 1 NC_015731.1 KEGG: ccb:Clocel_2288 hypothetical protein; hypothetical protein 819779 10932831 Nit79A3_0747 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694022.1 819300 D 261292 CDS YP_004694023.1 339482237 10932832 complement(820066..822930) 1 NC_015731.1 PFAM: Sulphatase-modifying factor; MTH538 TIR-like domain; KEGG: app:CAP2UW1_2320 hypothetical protein; sulfatase-modifying factor protein 822930 10932832 Nit79A3_0748 Nitrosomonas sp. Is79A3 sulfatase-modifying factor protein YP_004694023.1 820066 R 261292 CDS YP_004694024.1 339482238 10932834 complement(823193..823807) 1 NC_015731.1 KEGG: neu:NE2470 NUDIX hydrolase; TIGRFAM: Nucleoside diphosphate pyrophosphatase; PFAM: NUDIX hydrolase domain; nucleoside diphosphate pyrophosphatase 823807 10932834 Nit79A3_0750 Nitrosomonas sp. Is79A3 nucleoside diphosphate pyrophosphatase YP_004694024.1 823193 R 261292 CDS YP_004694025.1 339482239 10932835 complement(823868..824104) 1 NC_015731.1 KEGG: nit:NAL212_2552 hypothetical protein; hypothetical protein 824104 10932835 Nit79A3_0751 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694025.1 823868 R 261292 CDS YP_004694026.1 339482240 10932836 824319..824435 1 NC_015731.1 hypothetical protein 824435 10932836 Nit79A3_0752 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694026.1 824319 D 261292 CDS YP_004694027.1 339482241 10932837 complement(824478..824909) 1 NC_015731.1 KEGG: nit:NAL212_1927 hypothetical protein; hypothetical protein 824909 10932837 Nit79A3_0753 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694027.1 824478 R 261292 CDS YP_004694028.1 339482242 10932838 complement(825294..826349) 1 NC_015731.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: net:Neut_1521 cytochrome-c peroxidase; Di-heme cytochrome c peroxidase 826349 10932838 Nit79A3_0754 Nitrosomonas sp. Is79A3 Di-heme cytochrome c peroxidase YP_004694028.1 825294 R 261292 CDS YP_004694029.1 339482243 10932839 complement(826507..828753) 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; GAF; KEGG: nit:NAL212_2868 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; GAF and PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 828753 10932839 Nit79A3_0755 Nitrosomonas sp. Is79A3 GAF and PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004694029.1 826507 R 261292 CDS YP_004694030.1 339482244 10932840 complement(829129..831030) 1 NC_015731.1 KEGG: nmu:Nmul_A0201 K+ potassium transporter; HAMAP: Low affinity potassium transport system protein kup; PFAM: K+ potassium transporter; Low affinity potassium transport system protein kup 831030 10932840 Nit79A3_0756 Nitrosomonas sp. Is79A3 Low affinity potassium transport system protein kup YP_004694030.1 829129 R 261292 CDS YP_004694031.1 339482245 10932841 complement(831156..832160) 1 NC_015731.1 KEGG: nit:NAL212_1935 kelch repeat type 1-containing protein; PFAM: Kelch repeat type 1; SMART: Kelch repeat type 1; Kelch repeat type 1-containing protein 832160 10932841 Nit79A3_0757 Nitrosomonas sp. Is79A3 Kelch repeat type 1-containing protein YP_004694031.1 831156 R 261292 CDS YP_004694032.1 339482246 10932842 832473..833381 1 NC_015731.1 PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG: nit:NAL212_1241 NAD-dependent epimerase/dehydratase; hypothetical protein 833381 10932842 Nit79A3_0758 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694032.1 832473 D 261292 CDS YP_004694033.1 339482247 10932843 833865..835502 1 NC_015731.1 PFAM: Amidohydrolase 3; KEGG: mei:Msip34_2683 amidohydrolase 3; amidohydrolase 835502 10932843 Nit79A3_0759 Nitrosomonas sp. Is79A3 amidohydrolase YP_004694033.1 833865 D 261292 CDS YP_004694034.1 339482248 10932844 835505..837136 1 NC_015731.1 KEGG: mep:MPQ_2622 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF894, DitE; hypothetical protein 837136 10932844 Nit79A3_0760 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694034.1 835505 D 261292 CDS YP_004694035.1 339482249 10932845 837284..838153 1 NC_015731.1 PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: neu:NE2144 hypothetical protein; pirin 838153 10932845 Nit79A3_0761 Nitrosomonas sp. Is79A3 pirin YP_004694035.1 837284 D 261292 CDS YP_004694036.1 339482250 10932846 838223..838849 1 NC_015731.1 PFAM: Isochorismatase-like; KEGG: cti:RALTA_A0684 isochorismatase hydrolase; isochorismatase hydrolase 838849 10932846 Nit79A3_0762 Nitrosomonas sp. Is79A3 isochorismatase hydrolase YP_004694036.1 838223 D 261292 CDS YP_004694037.1 339482251 10932847 839018..839818 1 NC_015731.1 SMART: Beta-propeller repeat TECPR; KEGG: met:M446_1014 hypothetical protein; beta-propeller repeat TECPR 839818 10932847 Nit79A3_0763 Nitrosomonas sp. Is79A3 beta-propeller repeat TECPR YP_004694037.1 839018 D 261292 CDS YP_004694038.1 339482252 10932848 839851..840063 1 NC_015731.1 KEGG: bxe:Bxe_A2479 cytoplasmic protein; cytoplasmic protein 840063 10932848 Nit79A3_0764 Nitrosomonas sp. Is79A3 cytoplasmic protein YP_004694038.1 839851 D 261292 CDS YP_004694039.1 339482253 10932849 840245..841099 1 NC_015731.1 KEGG: nit:NAL212_2650 RIO-like kinase; PFAM: RIO-like kinase; SMART: RIO kinase; RIO-like kinase 841099 10932849 Nit79A3_0765 Nitrosomonas sp. Is79A3 RIO-like kinase YP_004694039.1 840245 D 261292 CDS YP_004694040.1 339482254 10932850 complement(841271..841513) 1 NC_015731.1 hypothetical protein 841513 10932850 Nit79A3_0766 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694040.1 841271 R 261292 CDS YP_004694041.1 339482255 10932851 complement(841711..842709) 1 NC_015731.1 KEGG: neu:NE0744 hypothetical protein; hypothetical protein 842709 10932851 Nit79A3_0767 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694041.1 841711 R 261292 CDS YP_004694042.1 339482256 10932852 complement(842779..843420) 1 NC_015731.1 KEGG: tmz:Tmz1t_0436 hypothetical protein; hypothetical protein 843420 10932852 Nit79A3_0768 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694042.1 842779 R 261292 CDS YP_004694043.1 339482257 10932853 complement(843735..844685) 1 NC_015731.1 KEGG: nit:NAL212_1926 response regulator receiver modulated CheW protein; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver region; response regulator receiver modulated CheW protein 844685 10932853 Nit79A3_0769 Nitrosomonas sp. Is79A3 response regulator receiver modulated CheW protein YP_004694043.1 843735 R 261292 CDS YP_004694044.1 339482258 10932854 844771..844893 1 NC_015731.1 hypothetical protein 844893 10932854 Nit79A3_0770 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694044.1 844771 D 261292 CDS YP_004694045.1 339482259 10932855 complement(844967..846235) 1 NC_015731.1 KEGG: nit:NAL212_1189 diguanylate phosphodiesterase metal dependent hydrolase domain; PFAM: Diguanylate phosphodiesterase, predicted; Metal-dependent hydrolase HDOD; SMART: Diguanylate phosphodiesterase, predicted; diguanylate phosphodiesterase with metal dependent hydrolase domain 846235 10932855 Nit79A3_0771 Nitrosomonas sp. Is79A3 diguanylate phosphodiesterase with metal dependent hydrolase domain YP_004694045.1 844967 R 261292 CDS YP_004694046.1 339482260 10932856 846609..847541 1 NC_015731.1 KEGG: nit:NAL212_1190 abortive infection protein; abortive infection protein 847541 10932856 Nit79A3_0772 Nitrosomonas sp. Is79A3 abortive infection protein YP_004694046.1 846609 D 261292 CDS YP_004694047.1 339482261 10932857 847714..848424 1 NC_015731.1 PFAM: Phosphoadenosine phosphosulphate reductase; KEGG: nit:NAL212_2199 phosphoadenylyl-sulfate reductase (thioredoxin); phosphoadenosine phosphosulfate reductase 848424 10932857 Nit79A3_0773 Nitrosomonas sp. Is79A3 phosphoadenosine phosphosulfate reductase YP_004694047.1 847714 D 261292 CDS YP_004694048.1 339482262 10932858 complement(848485..849447) 1 NC_015731.1 KEGG: nit:NAL212_2198 proline iminopeptidase; TIGRFAM: Peptidase S33, proline iminopeptidase 1; PFAM: Alpha/beta hydrolase fold-1; proline iminopeptidase 849447 10932858 Nit79A3_0774 Nitrosomonas sp. Is79A3 proline iminopeptidase YP_004694048.1 848485 R 261292 CDS YP_004694049.1 339482263 10932859 849598..849855 1 NC_015731.1 KEGG: nit:NAL212_2197 hypothetical protein; hypothetical protein 849855 10932859 Nit79A3_0775 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694049.1 849598 D 261292 CDS YP_004694050.1 339482264 10932860 849848..851017 1 NC_015731.1 PFAM: Patatin; KEGG: nit:NAL212_2196 patatin; Patatin 851017 10932860 Nit79A3_0776 Nitrosomonas sp. Is79A3 Patatin YP_004694050.1 849848 D 261292 CDS YP_004694051.1 339482265 10932861 851070..851789 1 NC_015731.1 KEGG: nit:NAL212_2195 integral membrane protein, YjbE family; TIGRFAM: integral membrane protein, YjbE family; PFAM: Integral membrane protein TerC; integral membrane protein, YjbE family 851789 10932861 Nit79A3_0777 Nitrosomonas sp. Is79A3 integral membrane protein, YjbE family YP_004694051.1 851070 D 261292 CDS YP_004694052.1 339482266 10932862 851822..852247 1 NC_015731.1 PFAM: UspA; KEGG: nit:NAL212_2194 UspA domain-containing protein; UspA domain-containing protein 852247 10932862 Nit79A3_0778 Nitrosomonas sp. Is79A3 UspA domain-containing protein YP_004694052.1 851822 D 261292 CDS YP_004694053.1 339482267 10932863 852269..853033 1 NC_015731.1 KEGG: nit:NAL212_2193 cyclic-AMP phosphodiesterase; cyclic-AMP phosphodiesterase 853033 10932863 Nit79A3_0779 Nitrosomonas sp. Is79A3 cyclic-AMP phosphodiesterase YP_004694053.1 852269 D 261292 CDS YP_004694054.1 339482268 10932864 853055..855439 1 NC_015731.1 KEGG: nit:NAL212_2192 phytochrome sensor protein; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: GAF; phytochrome sensor protein 855439 10932864 Nit79A3_0780 Nitrosomonas sp. Is79A3 phytochrome sensor protein YP_004694054.1 853055 D 261292 CDS YP_004694055.1 339482269 10932865 complement(855840..856274) 1 NC_015731.1 KEGG: gca:Galf_2551 pilus biogenesis protein TapA precursor; pilus biogenesis protein TapA 856274 10932865 Nit79A3_0781 Nitrosomonas sp. Is79A3 pilus biogenesis protein TapA YP_004694055.1 855840 R 261292 CDS YP_004694056.1 339482270 10932866 complement(856479..859268) 1 NC_015731.1 KEGG: nit:NAL212_2189 (glutamate--ammonia-ligase) adenylyltransferase; HAMAP: Glutamate-ammonia-ligase adenylyltransferase; PFAM: Glutamate-ammonia ligase adenylyltransferase; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; Glutamate-ammonia-ligase adenylyltransferase 859268 10932866 Nit79A3_0782 Nitrosomonas sp. Is79A3 Glutamate-ammonia-ligase adenylyltransferase YP_004694056.1 856479 R 261292 CDS YP_004694057.1 339482271 10932867 859509..860372 1 NC_015731.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: nit:NAL212_2187 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 860372 10932867 Nit79A3_0783 Nitrosomonas sp. Is79A3 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004694057.1 859509 D 261292 CDS YP_004694058.1 339482272 10932868 860599..862071 1 NC_015731.1 PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: nit:NAL212_2186 peptidase U62 modulator of DNA gyrase; peptidase U62 862071 10932868 Nit79A3_0784 Nitrosomonas sp. Is79A3 peptidase U62 YP_004694058.1 860599 D 261292 CDS YP_004694059.1 339482273 10932869 862144..863847 1 NC_015731.1 KEGG: nit:NAL212_2185 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; acetolactate synthase, large subunit, biosynthetic type 863847 10932869 Nit79A3_0785 Nitrosomonas sp. Is79A3 acetolactate synthase, large subunit, biosynthetic type YP_004694059.1 862144 D 261292 CDS YP_004694060.1 339482274 10932870 863855..864346 1 NC_015731.1 manually curated; TIGRFAM: Acetolactate synthase, small subunit; KEGG: nit:NAL212_2184 acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; acetolactate synthase, small subunit 864346 10932870 Nit79A3_0786 Nitrosomonas sp. Is79A3 acetolactate synthase, small subunit YP_004694060.1 863855 D 261292 CDS YP_004694061.1 339482275 10932871 864467..865483 1 NC_015731.1 TIGRFAM: Acetohydroxy acid isomeroreductase; HAMAP: Ketol-acid reductoisomerase; KEGG: nit:NAL212_2183 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal; Ketol-acid reductoisomerase 865483 10932871 Nit79A3_0787 Nitrosomonas sp. Is79A3 Ketol-acid reductoisomerase YP_004694061.1 864467 D 261292 CDS YP_004694062.1 339482276 10932872 865555..866220 1 NC_015731.1 TIGRFAM: Phosphatidylserine decarboxylase-related protein; HAMAP: Phosphatidylserine decarboxylase proenzyme; KEGG: nit:NAL212_2182 phosphatidylserine decarboxylase-like protein; PFAM: Phosphatidylserine decarboxylase-related; Phosphatidylserine decarboxylase proenzyme 866220 10932872 Nit79A3_0788 Nitrosomonas sp. Is79A3 Phosphatidylserine decarboxylase proenzyme YP_004694062.1 865555 D 261292 CDS YP_004694063.1 339482277 10932873 866375..867148 1 NC_015731.1 KEGG: nit:NAL212_2181 CDP-diacylglycerol/serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase 867148 10932873 Nit79A3_0789 Nitrosomonas sp. Is79A3 CDP-diacylglycerol/serine O-phosphatidyltransferase YP_004694063.1 866375 D 261292 CDS YP_004694064.1 339482278 10932874 867377..868909 1 NC_015731.1 KEGG: nit:NAL212_2180 2-isopropylmalate synthase; TIGRFAM: Bacterial 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; 2-isopropylmalate synthase 868909 10932874 Nit79A3_0790 Nitrosomonas sp. Is79A3 2-isopropylmalate synthase YP_004694064.1 867377 D 261292 CDS YP_004694065.1 339482279 10932875 868962..869447 1 NC_015731.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: nit:NAL212_2179 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 869447 10932875 Nit79A3_0791 Nitrosomonas sp. Is79A3 alkyl hydroperoxide reductase YP_004694065.1 868962 D 261292 CDS YP_004694066.1 339482280 10932876 complement(869505..870095) 1 NC_015731.1 PFAM: Lytic transglycosylase-like, catalytic; KEGG: nit:NAL212_2178 lytic transglycosylase catalytic; lytic transglycosylase 870095 10932876 Nit79A3_0792 Nitrosomonas sp. Is79A3 lytic transglycosylase YP_004694066.1 869505 R 261292 CDS YP_004694067.1 339482281 10932877 complement(870083..871792) 1 NC_015731.1 TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; HAMAP: Prolyl-tRNA synthetase; KEGG: nit:NAL212_2177 prolyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; YbaK/aminoacyl-tRNA synthetase associated region; Anticodon-binding; prolyl-tRNA synthetase 871792 10932877 Nit79A3_0793 Nitrosomonas sp. Is79A3 prolyl-tRNA synthetase YP_004694067.1 870083 R 261292 CDS YP_004694068.1 339482282 10932878 872002..872562 1 NC_015731.1 KEGG: nit:NAL212_2176 NUDIX hydrolase; HAMAP: RNA pyrophosphohydrolase; PFAM: NUDIX hydrolase domain; RNA pyrophosphohydrolase 872562 10932878 Nit79A3_0794 Nitrosomonas sp. Is79A3 RNA pyrophosphohydrolase YP_004694068.1 872002 D 261292 CDS YP_004694069.1 339482283 10932879 872744..873736 1 NC_015731.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: nit:NAL212_2175 cytochrome-c peroxidase; Di-heme cytochrome c peroxidase 873736 10932879 Nit79A3_0795 Nitrosomonas sp. Is79A3 Di-heme cytochrome c peroxidase YP_004694069.1 872744 D 261292 CDS YP_004694070.1 339482284 10932880 873984..874229 1 NC_015731.1 TIGRFAM: Host factor Hfq; HAMAP: Protein hfq; KEGG: nit:NAL212_2174 RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein, core; Protein hfq 874229 10932880 Nit79A3_0796 Nitrosomonas sp. Is79A3 Protein hfq YP_004694070.1 873984 D 261292 CDS YP_004694071.1 339482285 10932881 874229..875416 1 NC_015731.1 KEGG: nit:NAL212_2173 GTP-binding proten HflX; TIGRFAM: GTP-binding protein, HflX; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein HflX 875416 10932881 Nit79A3_0797 Nitrosomonas sp. Is79A3 GTP-binding protein HflX YP_004694071.1 874229 D 261292 CDS YP_004694072.1 339482286 10932882 875438..876616 1 NC_015731.1 TIGRFAM: HflK; PFAM: Band 7 protein; KEGG: nit:NAL212_2172 HflK protein; SMART: Band 7 protein; HflK protein 876616 10932882 Nit79A3_0798 Nitrosomonas sp. Is79A3 HflK protein YP_004694072.1 875438 D 261292 CDS YP_004694073.1 339482287 10932883 876617..877492 1 NC_015731.1 TIGRFAM: HflC; PFAM: Band 7 protein; KEGG: nit:NAL212_2171 HflC protein; SMART: Band 7 protein; HflC protein 877492 10932883 Nit79A3_0799 Nitrosomonas sp. Is79A3 HflC protein YP_004694073.1 876617 D 261292 CDS YP_004694074.1 339482288 10932884 877742..877927 1 NC_015731.1 PFAM: Protein of unknown function DUF2065; KEGG: nit:NAL212_2170 hypothetical protein; hypothetical protein 877927 10932884 Nit79A3_0800 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694074.1 877742 D 261292 CDS YP_004694075.1 339482289 10932885 877974..879125 1 NC_015731.1 TIGRFAM: Histidyl-tRNA synthetase, class IIa, HAMAP: ATP phosphoribosyltransferase regulatory subunit; KEGG: nit:NAL212_2169 histidyl-tRNA synthetase 2; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; ATP phosphoribosyltransferase 879125 10932885 Nit79A3_0801 Nitrosomonas sp. Is79A3 ATP phosphoribosyltransferase YP_004694075.1 877974 D 261292 CDS YP_004694076.1 339482290 10932886 879161..880456 1 NC_015731.1 SMART: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; KEGG: nit:NAL212_2168 adenylosuccinate synthetase; HAMAP: Adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; adenylosuccinate synthetase 880456 10932886 Nit79A3_0802 Nitrosomonas sp. Is79A3 adenylosuccinate synthetase YP_004694076.1 879161 D 261292 CDS YP_004694077.1 339482291 10932887 880502..880939 1 NC_015731.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nit:NAL212_2167 GCN5-like N-acetyltransferase; GCN5-like N-acetyltransferase 880939 10932887 Nit79A3_0803 Nitrosomonas sp. Is79A3 GCN5-like N-acetyltransferase YP_004694077.1 880502 D 261292 CDS YP_004694078.1 339482292 10932888 complement(880946..881332) 1 NC_015731.1 hypothetical protein 881332 10932888 Nit79A3_0804 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694078.1 880946 R 261292 CDS YP_004694079.1 339482293 10932889 881674..882054 1 NC_015731.1 KEGG: nit:NAL212_1809 hypothetical protein; hypothetical protein 882054 10932889 Nit79A3_0805 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694079.1 881674 D 261292 CDS YP_004694080.1 339482294 10932890 882209..882472 1 NC_015731.1 TIGRFAM: Ribosomal protein S20; HAMAP: Ribosomal protein S20; KEGG: nit:NAL212_1808 30S ribosomal protein S20; PFAM: Ribosomal protein S20; 30S ribosomal protein S20 882472 10932890 Nit79A3_0806 Nitrosomonas sp. Is79A3 30S ribosomal protein S20 YP_004694080.1 882209 D 261292 CDS YP_004694081.1 339482295 10932891 882747..884459 1 NC_015731.1 KEGG: nit:NAL212_2750 hydroxylamine oxidase; hydroxylamine oxidase 884459 10932891 Nit79A3_0807 Nitrosomonas sp. Is79A3 hydroxylamine oxidase YP_004694081.1 882747 D 261292 CDS YP_004694082.1 339482296 10932892 884456..885490 1 NC_015731.1 KEGG: nit:NAL212_2749 hypothetical protein; hypothetical protein 885490 10932892 Nit79A3_0808 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694082.1 884456 D 261292 CDS YP_004694083.1 339482297 10932893 885650..886369 1 NC_015731.1 KEGG: nit:NAL212_2748 cytochrome c-554; cytochrome c-554 886369 10932893 Nit79A3_0809 Nitrosomonas sp. Is79A3 cytochrome c-554 YP_004694083.1 885650 D 261292 CDS YP_004694084.1 339482298 10932894 886369..887043 1 NC_015731.1 PFAM: NapC/NirT cytochrome c, N-terminal; KEGG: nit:NAL212_2747 NapC/NirT cytochrome c domain-containing protein; NapC/NirT cytochrome c domain-containing protein 887043 10932894 Nit79A3_0810 Nitrosomonas sp. Is79A3 NapC/NirT cytochrome c domain-containing protein YP_004694084.1 886369 D 261292 CDS YP_004694085.1 339482299 10932895 887266..888747 1 NC_015731.1 KEGG: nit:NAL212_1803 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 888747 10932895 Nit79A3_0811 Nitrosomonas sp. Is79A3 DEAD/DEAH box helicase domain-containing protein YP_004694085.1 887266 D 261292 CDS YP_004694086.1 339482300 10932896 889085..890398 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: gur:Gura_1234 hypothetical protein; transposase IS4 family protein 890398 10932896 Nit79A3_0812 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694086.1 889085 D 261292 CDS YP_004694087.1 339482301 10932900 891066..892256 1 NC_015731.1 KEGG: nit:NAL212_2147 translation elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; translation elongation factor Tu 892256 10932900 Nit79A3_0813 Nitrosomonas sp. Is79A3 translation elongation factor Tu YP_004694087.1 891066 D 261292 CDS YP_004694088.1 339482302 10932902 892702..893046 1 NC_015731.1 KEGG: nit:NAL212_2146 preprotein translocase, SecE subunit; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein secE/sec61-gamma protein; preprotein translocase subunit SecE 893046 10932902 Nit79A3_0814 Nitrosomonas sp. Is79A3 preprotein translocase subunit SecE YP_004694088.1 892702 D 261292 CDS YP_004694089.1 339482303 10932903 893068..893601 1 NC_015731.1 TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; KEGG: nit:NAL212_2145 NusG antitermination factor; SMART: Transcription antitermination protein, NusG, N-terminal; KOW; NusG antitermination factor 893601 10932903 Nit79A3_0815 Nitrosomonas sp. Is79A3 NusG antitermination factor YP_004694089.1 893068 D 261292 CDS YP_004694090.1 339482304 10932904 893726..894157 1 NC_015731.1 TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, N-terminal; Ribosomal protein L11, C-terminal; KEGG: nit:NAL212_2144 50S ribosomal protein L11; SMART: Ribosomal protein L11; 50S ribosomal protein L11 894157 10932904 Nit79A3_0816 Nitrosomonas sp. Is79A3 50S ribosomal protein L11 YP_004694090.1 893726 D 261292 CDS YP_004694091.1 339482305 10932905 894159..894851 1 NC_015731.1 KEGG: nit:NAL212_2143 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1; 50S ribosomal protein L1 894851 10932905 Nit79A3_0817 Nitrosomonas sp. Is79A3 50S ribosomal protein L1 YP_004694091.1 894159 D 261292 CDS YP_004694092.1 339482306 10932906 895170..895685 1 NC_015731.1 KEGG: nit:NAL212_2142 50S ribosomal protein L10; HAMAP: 50S ribosomal protein L10; PFAM: Ribosomal protein L10; 50S ribosomal protein L10 895685 10932906 Nit79A3_0818 Nitrosomonas sp. Is79A3 50S ribosomal protein L10 YP_004694092.1 895170 D 261292 CDS YP_004694093.1 339482307 10932907 895750..896130 1 NC_015731.1 TIGRFAM: Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; KEGG: nit:NAL212_2141 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; 50S ribosomal protein L7/L12 896130 10932907 Nit79A3_0819 Nitrosomonas sp. Is79A3 50S ribosomal protein L7/L12 YP_004694093.1 895750 D 261292 CDS YP_004694094.1 339482308 10932908 896285..900358 1 NC_015731.1 TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; HAMAP: DNA-directed RNA polymerase subunit beta; KEGG: nit:NAL212_2140 DNA-directed RNA polymerase, beta subunit; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase, beta subunit, protrusion; RNA polymerase Rpb2, domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7; DNA-directed RNA polymerase subunit beta 900358 10932908 Nit79A3_0820 Nitrosomonas sp. Is79A3 DNA-directed RNA polymerase subunit beta YP_004694094.1 896285 D 261292 CDS YP_004694095.1 339482309 10932909 900461..904663 1 NC_015731.1 SMART: RNA polymerase, N-terminal; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; KEGG: nit:NAL212_2139 DNA-directed RNA polymerase, beta' subunit; HAMAP: DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; DNA-directed RNA polymerase subunit beta' 904663 10932909 Nit79A3_0821 Nitrosomonas sp. Is79A3 DNA-directed RNA polymerase subunit beta' YP_004694095.1 900461 D 261292 CDS YP_004694096.1 339482310 10932910 904896..906608 1 NC_015731.1 KEGG: nit:NAL212_2750 hydroxylamine oxidase; hydroxylamine oxidase 906608 10932910 Nit79A3_0822 Nitrosomonas sp. Is79A3 hydroxylamine oxidase YP_004694096.1 904896 D 261292 CDS YP_004694097.1 339482311 10932911 906605..907639 1 NC_015731.1 KEGG: nit:NAL212_2749 hypothetical protein; hypothetical protein 907639 10932911 Nit79A3_0823 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694097.1 906605 D 261292 CDS YP_004694098.1 339482312 10932912 907799..908518 1 NC_015731.1 KEGG: nit:NAL212_2748 cytochrome c-554; cytochrome c-554 908518 10932912 Nit79A3_0824 Nitrosomonas sp. Is79A3 cytochrome c-554 YP_004694098.1 907799 D 261292 CDS YP_004694099.1 339482313 10932913 908518..909192 1 NC_015731.1 PFAM: NapC/NirT cytochrome c, N-terminal; KEGG: nit:NAL212_2747 NapC/NirT cytochrome c domain-containing protein; NapC/NirT cytochrome c domain-containing protein 909192 10932913 Nit79A3_0825 Nitrosomonas sp. Is79A3 NapC/NirT cytochrome c domain-containing protein YP_004694099.1 908518 D 261292 CDS YP_004694100.1 339482314 10932914 909344..910099 1 NC_015731.1 KEGG: nit:NAL212_2134 hypothetical protein; hypothetical protein 910099 10932914 Nit79A3_0826 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694100.1 909344 D 261292 CDS YP_004694101.1 339482315 10932915 910188..912095 1 NC_015731.1 KEGG: nit:NAL212_2133 threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; threonyl-tRNA synthetase 912095 10932915 Nit79A3_0827 Nitrosomonas sp. Is79A3 threonyl-tRNA synthetase YP_004694101.1 910188 D 261292 CDS YP_004694102.1 339482316 10932916 912151..912705 1 NC_015731.1 TIGRFAM: Translation initiation factor 3; HAMAP: Translation initiation factor IF-3; KEGG: nit:NAL212_2132 translation initiation factor IF-3; PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; Translation initiation factor IF-3 912705 10932916 Nit79A3_0828 Nitrosomonas sp. Is79A3 Translation initiation factor IF-3 YP_004694102.1 912151 D 261292 CDS YP_004694103.1 339482317 10932917 912826..913023 1 NC_015731.1 TIGRFAM: Ribosomal protein L35; HAMAP: Ribosomal protein L35; KEGG: nit:NAL212_2131 50S ribosomal protein L35; PFAM: Ribosomal protein L35; 50S ribosomal protein L35 913023 10932917 Nit79A3_0829 Nitrosomonas sp. Is79A3 50S ribosomal protein L35 YP_004694103.1 912826 D 261292 CDS YP_004694104.1 339482318 10932918 913036..913395 1 NC_015731.1 TIGRFAM: Ribosomal protein L20; HAMAP: Ribosomal protein L20; KEGG: nit:NAL212_2130 50S ribosomal protein L20; PFAM: Ribosomal protein L20; 50S ribosomal protein L20 913395 10932918 Nit79A3_0830 Nitrosomonas sp. Is79A3 50S ribosomal protein L20 YP_004694104.1 913036 D 261292 CDS YP_004694105.1 339482319 10932919 913506..914525 1 NC_015731.1 TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain; KEGG: nit:NAL212_2129 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal; phenylalanyl-tRNA synthetase subunit alpha 914525 10932919 Nit79A3_0831 Nitrosomonas sp. Is79A3 phenylalanyl-tRNA synthetase subunit alpha YP_004694105.1 913506 D 261292 CDS YP_004694106.1 339482320 10932920 914567..916939 1 NC_015731.1 TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: nit:NAL212_2128 phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta 916939 10932920 Nit79A3_0832 Nitrosomonas sp. Is79A3 phenylalanyl-tRNA synthetase subunit beta YP_004694106.1 914567 D 261292 CDS YP_004694107.1 339482321 10932921 917125..917433 1 NC_015731.1 SMART: Histone-like bacterial DNA-binding protein; TIGRFAM: Integration host factor, alpha subunit; KEGG: nit:NAL212_2127 integration host factor, alpha subunit; HAMAP: Integration host factor, alpha subunit; PFAM: Histone-like bacterial DNA-binding protein; Integration host factor subunit alpha 917433 10932921 Nit79A3_0833 Nitrosomonas sp. Is79A3 Integration host factor subunit alpha YP_004694107.1 917125 D 261292 CDS YP_004694108.1 339482322 10932922 917411..917791 1 NC_015731.1 KEGG: nit:NAL212_2126 regulatory protein MerR; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MarR family transcriptional regulator 917791 10932922 Nit79A3_0834 Nitrosomonas sp. Is79A3 MarR family transcriptional regulator YP_004694108.1 917411 D 261292 CDS YP_004694109.1 339482323 10932924 918024..918767 1 NC_015731.1 TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; HAMAP: Multifunctional protein surE; KEGG: nit:NAL212_2125 stationary-phase survival protein SurE; PFAM: Survival protein SurE-like phosphatase/nucleotidase; Multifunctional protein surE 918767 10932924 Nit79A3_0835 Nitrosomonas sp. Is79A3 Multifunctional protein surE YP_004694109.1 918024 D 261292 CDS YP_004694110.1 339482324 10932925 918845..919480 1 NC_015731.1 TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; HAMAP: Protein-L-isoaspartate O-methyltransferase; KEGG: nit:NAL212_2124 protein-L-isoaspartate O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; Protein-L-isoaspartate O-methyltransferase 919480 10932925 Nit79A3_0836 Nitrosomonas sp. Is79A3 Protein-L-isoaspartate O-methyltransferase YP_004694110.1 918845 D 261292 CDS YP_004694111.1 339482325 10932926 919500..920576 1 NC_015731.1 KEGG: nit:NAL212_2123 peptidase M23; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; peptidase M23 920576 10932926 Nit79A3_0837 Nitrosomonas sp. Is79A3 peptidase M23 YP_004694111.1 919500 D 261292 CDS YP_004694112.1 339482326 10932927 complement(920655..921011) 1 NC_015731.1 KEGG: nmu:Nmul_A2165 hypothetical protein; hypothetical protein 921011 10932927 Nit79A3_0838 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694112.1 920655 R 261292 CDS YP_004694113.1 339482327 10932928 921516..922742 1 NC_015731.1 PFAM: Aminotransferase, class I/II; KEGG: nit:NAL212_1611 aspartate transaminase; class I and II aminotransferase 922742 10932928 Nit79A3_0839 Nitrosomonas sp. Is79A3 class I and II aminotransferase YP_004694113.1 921516 D 261292 CDS YP_004694114.1 339482328 10932929 922832..924145 1 NC_015731.1 PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT; KEGG: nit:NAL212_1612 homoserine dehydrogenase; homoserine dehydrogenase 924145 10932929 Nit79A3_0840 Nitrosomonas sp. Is79A3 homoserine dehydrogenase YP_004694114.1 922832 D 261292 CDS YP_004694115.1 339482329 10932930 924264..925682 1 NC_015731.1 KEGG: nit:NAL212_1613 threonine synthase; TIGRFAM: Threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; threonine synthase 925682 10932930 Nit79A3_0841 Nitrosomonas sp. Is79A3 threonine synthase YP_004694115.1 924264 D 261292 CDS YP_004694116.1 339482330 10932931 925754..927811 1 NC_015731.1 KEGG: nit:NAL212_2775 hypothetical protein; hypothetical protein 927811 10932931 Nit79A3_0842 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694116.1 925754 D 261292 CDS YP_004694117.1 339482331 10932932 928033..928752 1 NC_015731.1 KEGG: mmb:Mmol_0746 hypothetical protein; hypothetical protein 928752 10932932 Nit79A3_0843 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694117.1 928033 D 261292 CDS YP_004694118.1 339482332 10932933 complement(929095..929289) 1 NC_015731.1 KEGG: nit:NAL212_1786 hypothetical protein; hypothetical protein 929289 10932933 Nit79A3_0844 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694118.1 929095 R 261292 CDS YP_004694119.1 339482333 10932934 929574..930269 1 NC_015731.1 KEGG: nit:NAL212_1785 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; PFAM: Ferredoxin; succinate dehydrogenase and fumarate reductase iron-sulfur protein 930269 10932934 Nit79A3_0845 Nitrosomonas sp. Is79A3 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004694119.1 929574 D 261292 CDS YP_004694120.1 339482334 10932935 930266..930499 1 NC_015731.1 PFAM: Protein of unknown function DUF339; KEGG: nit:NAL212_1784 hypothetical protein; hypothetical protein 930499 10932935 Nit79A3_0846 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694120.1 930266 D 261292 CDS YP_004694121.1 339482335 10932936 930580..931881 1 NC_015731.1 KEGG: nit:NAL212_1783 citrate synthase I; TIGRFAM: Citrate synthase, type II; PFAM: Citrate synthase-like; citrate synthase I 931881 10932936 Nit79A3_0847 Nitrosomonas sp. Is79A3 citrate synthase I YP_004694121.1 930580 D 261292 CDS YP_004694122.1 339482336 10932937 931909..934749 1 NC_015731.1 KEGG: nit:NAL212_1782 2-oxoglutarate dehydrogenase, E1 subunit; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; 2-oxoglutarate dehydrogenase E1 934749 10932937 Nit79A3_0848 Nitrosomonas sp. Is79A3 2-oxoglutarate dehydrogenase E1 YP_004694122.1 931909 D 261292 CDS YP_004694123.1 339482337 10932938 934762..936021 1 NC_015731.1 KEGG: nit:NAL212_1781 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; TIGRFAM: Dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; 2-oxoglutarate dehydrogenase E2 936021 10932938 Nit79A3_0849 Nitrosomonas sp. Is79A3 2-oxoglutarate dehydrogenase E2 YP_004694123.1 934762 D 261292 CDS YP_004694124.1 339482338 10932939 936153..936665 1 NC_015731.1 PFAM: PEP-CTERM bacterial; KEGG: cps:CPS_4565 hypothetical protein; hypothetical protein 936665 10932939 Nit79A3_0850 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694124.1 936153 D 261292 CDS YP_004694125.1 339482339 10932940 complement(936610..937338) 1 NC_015731.1 KEGG: meh:M301_0967 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; Crp/Fnr family transcriptional regulator 937338 10932940 Nit79A3_0851 Nitrosomonas sp. Is79A3 Crp/Fnr family transcriptional regulator YP_004694125.1 936610 R 261292 CDS YP_004694126.1 339482340 10932941 complement(937363..938187) 1 NC_015731.1 TIGRFAM: PAS; PFAM: Signal transduction response regulator, receiver region; KEGG: meh:M301_0966 response regulator receiver protein; SMART: Signal transduction response regulator, receiver region; PAS/PAC sensor protein 938187 10932941 Nit79A3_0852 Nitrosomonas sp. Is79A3 PAS/PAC sensor protein YP_004694126.1 937363 R 261292 CDS YP_004694127.1 339482341 10932942 complement(938177..940309) 1 NC_015731.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; PAS fold; Signal transduction response regulator, receiver region; KEGG: sfr:Sfri_1019 PAS/PAC sensor hybrid histidine kinase; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; PAS/PAC sensor hybrid histidine kinase 940309 10932942 Nit79A3_0853 Nitrosomonas sp. Is79A3 PAS/PAC sensor hybrid histidine kinase YP_004694127.1 938177 R 261292 CDS YP_004694128.1 339482342 10932943 complement(940680..944201) 1 NC_015731.1 TIGRFAM: DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: nit:NAL212_1467 DNA polymerase III, alpha subunit; SMART: Polymerase/histidinol phosphatase, N-terminal; DNA polymerase III subunit alpha 944201 10932943 Nit79A3_0854 Nitrosomonas sp. Is79A3 DNA polymerase III subunit alpha YP_004694128.1 940680 R 261292 CDS YP_004694129.1 339482343 10932944 complement(944293..945312) 1 NC_015731.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: nit:NAL212_1469 alpha/beta hydrolase fold protein; alpha/beta hydrolase 945312 10932944 Nit79A3_0855 Nitrosomonas sp. Is79A3 alpha/beta hydrolase YP_004694129.1 944293 R 261292 CDS YP_004694130.1 339482344 10932945 complement(945473..947206) 1 NC_015731.1 TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3; HAMP linker domain; KEGG: nit:NAL212_0245 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; PAS; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 947206 10932945 Nit79A3_0856 Nitrosomonas sp. Is79A3 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor YP_004694130.1 945473 R 261292 CDS YP_004694131.1 339482345 10932946 947569..949209 1 NC_015731.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; KEGG: nit:NAL212_1289 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS/PAC sensor signal transduction histidine kinase 949209 10932946 Nit79A3_0857 Nitrosomonas sp. Is79A3 PAS/PAC sensor signal transduction histidine kinase YP_004694131.1 947569 D 261292 CDS YP_004694132.1 339482346 10932947 949219..949665 1 NC_015731.1 KEGG: nit:NAL212_1290 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 949665 10932947 Nit79A3_0858 Nitrosomonas sp. Is79A3 response regulator receiver protein YP_004694132.1 949219 D 261292 CDS YP_004694133.1 339482347 10932948 949672..951129 1 NC_015731.1 TIGRFAM: PAS; PFAM: Signal transduction response regulator, receiver region; PAS fold; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; KEGG: nit:NAL212_1291 multi-sensor signal transduction histidine kinase; SMART: Signal transduction response regulator, receiver region; PAS; PAC motif; ATP-binding region, ATPase-like; signal transduction histidine kinase 951129 10932948 Nit79A3_0859 Nitrosomonas sp. Is79A3 signal transduction histidine kinase YP_004694133.1 949672 D 261292 CDS YP_004694134.1 339482348 10932949 951122..951754 1 NC_015731.1 KEGG: nit:NAL212_1292 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 951754 10932949 Nit79A3_0860 Nitrosomonas sp. Is79A3 LuxR family transcriptional regulator YP_004694134.1 951122 D 261292 CDS YP_004694135.1 339482349 10932950 complement(951784..952419) 1 NC_015731.1 KEGG: net:Neut_1627 esterase/lipase/thioesterase; esterase 952419 10932950 Nit79A3_0861 Nitrosomonas sp. Is79A3 esterase YP_004694135.1 951784 R 261292 CDS YP_004694136.1 339482350 10932951 complement(952442..952750) 1 NC_015731.1 KEGG: nit:NAL212_1687 ferredoxin 2Fe-2s protein; ferredoxin 2Fe-2s protein 952750 10932951 Nit79A3_0862 Nitrosomonas sp. Is79A3 ferredoxin 2Fe-2s protein YP_004694136.1 952442 R 261292 CDS YP_004694137.1 339482351 10932952 complement(952785..953900) 1 NC_015731.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: nmu:Nmul_A0979 extracellular solute-binding protein; ABC transporter substrate-binding protein 953900 10932952 Nit79A3_0863 Nitrosomonas sp. Is79A3 ABC transporter substrate-binding protein YP_004694137.1 952785 R 261292 CDS YP_004694138.1 339482352 10932953 complement(953903..954685) 1 NC_015731.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: neu:NE1872 spermidine/putrescine transport system permease; ABC transporter permease 954685 10932953 Nit79A3_0864 Nitrosomonas sp. Is79A3 ABC transporter permease YP_004694138.1 953903 R 261292 CDS YP_004694139.1 339482353 10932954 complement(954724..955617) 1 NC_015731.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: nmu:Nmul_A0981 binding-protein dependent transport system inner membrane protein; ABC transporter permease 955617 10932954 Nit79A3_0865 Nitrosomonas sp. Is79A3 ABC transporter permease YP_004694139.1 954724 R 261292 CDS YP_004694140.1 339482354 10932955 complement(955645..956730) 1 NC_015731.1 TIGRFAM: Spermidine/putrescine ABC transporter ATP-binding subunit; PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: nmu:Nmul_A0982 spermidine/putrescine ABC transporter ATP-binding subunit; SMART: ATPase, AAA+ type, core; spermidine/putrescine ABC transporter ATPase 956730 10932955 Nit79A3_0866 Nitrosomonas sp. Is79A3 spermidine/putrescine ABC transporter ATPase YP_004694140.1 955645 R 261292 CDS YP_004694141.1 339482355 10932957 957764..958249 1 NC_015731.1 KEGG: psl:Psta_1889 limonene-12-epoxide hydrolase; limonene-12-epoxide hydrolase 958249 10932957 Nit79A3_0868 Nitrosomonas sp. Is79A3 limonene-12-epoxide hydrolase YP_004694141.1 957764 D 261292 CDS YP_004694142.1 339482356 10932958 958483..959337 1 NC_015731.1 PFAM: Protein of unknown function DUF676, hydrolase-like; KEGG: cbk:CLL_A1759 serine esterase; hypothetical protein 959337 10932958 Nit79A3_0869 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694142.1 958483 D 261292 CDS YP_004694143.1 339482357 10932959 complement(959428..960432) 1 NC_015731.1 PFAM: Fatty acid desaturase, type 1; KEGG: net:Neut_1694 fatty acid desaturase; fatty acid desaturase 960432 10932959 Nit79A3_0870 Nitrosomonas sp. Is79A3 fatty acid desaturase YP_004694143.1 959428 R 261292 CDS YP_004694144.1 339482358 10932960 complement(960942..961055) 1 NC_015731.1 hypothetical protein 961055 10932960 Nit79A3_0871 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694144.1 960942 R 261292 CDS YP_004694145.1 339482359 10932961 complement(961283..962797) 1 NC_015731.1 KEGG: nit:NAL212_1686 2-polyprenylphenol 6-hydroxylase; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1; 2-polyprenylphenol 6-hydroxylase 962797 10932961 Nit79A3_0872 Nitrosomonas sp. Is79A3 2-polyprenylphenol 6-hydroxylase YP_004694145.1 961283 R 261292 CDS YP_004694146.1 339482360 10932962 complement(962919..963521) 1 NC_015731.1 KEGG: nit:NAL212_1685 hypothetical protein; hypothetical protein 963521 10932962 Nit79A3_0873 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694146.1 962919 R 261292 CDS YP_004694147.1 339482361 10932964 complement(966943..967932) 1 NC_015731.1 KEGG: slt:Slit_2431 filamentation induced by cAMP protein Fic; TIGRFAM: Death-on-curing protein; PFAM: Filamentation induced by cAMP/death on curing, related; death-on-curing family protein 967932 10932964 Nit79A3_0875 Nitrosomonas sp. Is79A3 death-on-curing family protein YP_004694147.1 966943 R 261292 CDS YP_004694148.1 339482362 10932965 complement(968026..968220) 1 NC_015731.1 PFAM: Protein of unknown function DUF2191; KEGG: nit:NAL212_2266 hypothetical protein; hypothetical protein 968220 10932965 Nit79A3_0876 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694148.1 968026 R 261292 CDS YP_004694149.1 339482363 10932969 complement(970268..970606) 1 NC_015731.1 PFAM: Nucleotidyltransferase; KEGG: avn:Avin_07030 nucleotidyltransferase; DNA polymerase beta domain-containing protein 970606 10932969 Nit79A3_0880 Nitrosomonas sp. Is79A3 DNA polymerase beta domain-containing protein YP_004694149.1 970268 R 261292 CDS YP_004694150.1 339482364 10932970 complement(970603..971022) 1 NC_015731.1 PFAM: Nucleotidyltransferase substrate binding protein, HI0074; KEGG: gur:Gura_2085 hypothetical protein; Nucleotidyltransferase substrate binding protein HI0074 971022 10932970 Nit79A3_0881 Nitrosomonas sp. Is79A3 Nucleotidyltransferase substrate binding protein HI0074 YP_004694150.1 970603 R 261292 CDS YP_004694151.1 339482365 10932971 complement(971019..972581) 1 NC_015731.1 PFAM: DNA methylase, adenine-specific; KEGG: rfr:Rfer_4006 N-6 DNA methylase; N-6 DNA methylase 972581 10932971 Nit79A3_0882 Nitrosomonas sp. Is79A3 N-6 DNA methylase YP_004694151.1 971019 R 261292 CDS YP_004694152.1 339482366 10932972 complement(972666..974105) 1 NC_015731.1 TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit; HAMAP: Glutamyl-tRNA(Gln) amidotransferase, B subunit; KEGG: nit:NAL212_0275 glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, central region; Asn/Gln amidotransferase; aspartyl/glutamyl-tRNA amidotransferase subunit B 974105 10932972 Nit79A3_0883 Nitrosomonas sp. Is79A3 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_004694152.1 972666 R 261292 CDS YP_004694153.1 339482367 10932973 complement(974153..975601) 1 NC_015731.1 TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit; HAMAP: Glutamyl-tRNA(Gln) amidotransferase A subunit; KEGG: nit:NAL212_0274 glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; Glutamyl-tRNA(Gln) amidotransferase subunit A 975601 10932973 Nit79A3_0884 Nitrosomonas sp. Is79A3 Glutamyl-tRNA(Gln) amidotransferase subunit A YP_004694153.1 974153 R 261292 CDS YP_004694154.1 339482368 10932974 complement(975701..975988) 1 NC_015731.1 TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; HAMAP: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; KEGG: nit:NAL212_0273 glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit; aspartyl/glutamyl-tRNA amidotransferase subunit C 975988 10932974 Nit79A3_0885 Nitrosomonas sp. Is79A3 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_004694154.1 975701 R 261292 CDS YP_004694155.1 339482369 10932975 976117..977175 1 NC_015731.1 KEGG: nit:NAL212_0272 cell shape determining protein, MreB/Mrl family; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein 977175 10932975 Nit79A3_0886 Nitrosomonas sp. Is79A3 MreB/Mrl family cell shape determining protein YP_004694155.1 976117 D 261292 CDS YP_004694156.1 339482370 10932976 977255..978145 1 NC_015731.1 KEGG: nit:NAL212_0271 rod shape-determining protein MreC; TIGRFAM: Rod shape-determining protein MreC, subtype; PFAM: Rod shape-determining protein MreC; rod shape-determining protein MreC 978145 10932976 Nit79A3_0887 Nitrosomonas sp. Is79A3 rod shape-determining protein MreC YP_004694156.1 977255 D 261292 CDS YP_004694157.1 339482371 10932977 978126..978677 1 NC_015731.1 KEGG: nit:NAL212_0270 rod shape-determining protein MreD; TIGRFAM: Cell shape-determining protein MreD; PFAM: Cell shape-determining protein MreD; rod shape-determining protein MreD 978677 10932977 Nit79A3_0888 Nitrosomonas sp. Is79A3 rod shape-determining protein MreD YP_004694157.1 978126 D 261292 CDS YP_004694158.1 339482372 10932978 978674..980587 1 NC_015731.1 KEGG: nit:NAL212_0269 penicillin-binding protein 2; TIGRFAM: Penicillin-binding protein 2; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; penicillin-binding protein 2 980587 10932978 Nit79A3_0889 Nitrosomonas sp. Is79A3 penicillin-binding protein 2 YP_004694158.1 978674 D 261292 CDS YP_004694159.1 339482373 10932979 980794..981894 1 NC_015731.1 KEGG: nit:NAL212_0268 rod shape-determining protein RodA; TIGRFAM: Rod shape-determining protein RodA; PFAM: Cell cycle protein; rod shape-determining protein RodA 981894 10932979 Nit79A3_0890 Nitrosomonas sp. Is79A3 rod shape-determining protein RodA YP_004694159.1 980794 D 261292 CDS YP_004694160.1 339482374 10932980 981891..982850 1 NC_015731.1 KEGG: nit:NAL212_0267 rare lipoprotein A; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Rare lipoprotein A; Sporulation/cell division region, bacteria; rare lipoprotein A 982850 10932980 Nit79A3_0891 Nitrosomonas sp. Is79A3 rare lipoprotein A YP_004694160.1 981891 D 261292 CDS YP_004694161.1 339482375 10932981 complement(983477..984259) 1 NC_015731.1 KEGG: nit:NAL212_2121 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 984259 10932981 Nit79A3_0892 Nitrosomonas sp. Is79A3 HAD-superfamily hydrolase YP_004694161.1 983477 R 261292 CDS YP_004694162.1 339482376 10932982 complement(984261..985304) 1 NC_015731.1 KEGG: nit:NAL212_2120 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; SUA5; Sua5/YciO/YrdC/YwlC family protein 985304 10932982 Nit79A3_0893 Nitrosomonas sp. Is79A3 Sua5/YciO/YrdC/YwlC family protein YP_004694162.1 984261 R 261292 CDS YP_004694163.1 339482377 10932983 complement(985361..986533) 1 NC_015731.1 KEGG: nit:NAL212_2119 phospholipase D/transphosphatidylase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; phospholipase D/Transphosphatidylase 986533 10932983 Nit79A3_0894 Nitrosomonas sp. Is79A3 phospholipase D/Transphosphatidylase YP_004694163.1 985361 R 261292 CDS YP_004694164.1 339482378 10932984 complement(986655..987752) 1 NC_015731.1 TIGRFAM: Quinolinate synthetase A; HAMAP: Quinolinate synthase A; KEGG: nit:NAL212_2118 quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; Quinolinate synthase A 987752 10932984 Nit79A3_0895 Nitrosomonas sp. Is79A3 Quinolinate synthase A YP_004694164.1 986655 R 261292 CDS YP_004694165.1 339482379 10932985 988123..988689 1 NC_015731.1 PFAM: Protein of unknown function DUF1239; KEGG: nit:NAL212_2117 hypothetical protein; hypothetical protein 988689 10932985 Nit79A3_0896 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694165.1 988123 D 261292 CDS YP_004694166.1 339482380 10932986 988686..989216 1 NC_015731.1 KEGG: nit:NAL212_2116 lipopolysaccharide transport periplasmic protein LptA; TIGRFAM: Cell envelope biogenesis YhbN; PFAM: OstA-like protein; lipopolysaccharide transport periplasmic protein LptA 989216 10932986 Nit79A3_0897 Nitrosomonas sp. Is79A3 lipopolysaccharide transport periplasmic protein LptA YP_004694166.1 988686 D 261292 CDS YP_004694167.1 339482381 10932987 989261..989983 1 NC_015731.1 KEGG: nit:NAL212_2115 sulfate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 989983 10932987 Nit79A3_0898 Nitrosomonas sp. Is79A3 ABC transporter YP_004694167.1 989261 D 261292 CDS YP_004694168.1 339482382 10932988 990038..991486 1 NC_015731.1 KEGG: nit:NAL212_2114 RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54; RNA polymerase, sigma 54 subunit, RpoN 991486 10932988 Nit79A3_0899 Nitrosomonas sp. Is79A3 RNA polymerase, sigma 54 subunit, RpoN YP_004694168.1 990038 D 261292 CDS YP_004694169.1 339482383 10932989 991506..991835 1 NC_015731.1 KEGG: nit:NAL212_2113 sigma 54 modulation protein/30S ribosomal protein S30EA; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; sigma 54 modulation protein/30S ribosomal protein S30EA 991835 10932989 Nit79A3_0900 Nitrosomonas sp. Is79A3 sigma 54 modulation protein/30S ribosomal protein S30EA YP_004694169.1 991506 D 261292 CDS YP_004694170.1 339482384 10932990 991959..992426 1 NC_015731.1 PFAM: Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; KEGG: nit:NAL212_2112 PTS IIA-like nitrogen-regulatory protein PtsN; PTS IIA-like nitrogen-regulatory protein PtsN 992426 10932990 Nit79A3_0901 Nitrosomonas sp. Is79A3 PTS IIA-like nitrogen-regulatory protein PtsN YP_004694170.1 991959 D 261292 CDS YP_004694171.1 339482385 10932991 992413..993372 1 NC_015731.1 KEGG: nit:NAL212_2111 HPr kinase; HAMAP: HPr kinase/phosphorylase; PFAM: Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, C-terminal; HPr kinase 993372 10932991 Nit79A3_0902 Nitrosomonas sp. Is79A3 HPr kinase YP_004694171.1 992413 D 261292 CDS YP_004694172.1 339482386 10932992 993444..994058 1 NC_015731.1 KEGG: nit:NAL212_2110 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: Phenylacrylic acid decarboxylase; PFAM: Flavoprotein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 994058 10932992 Nit79A3_0903 Nitrosomonas sp. Is79A3 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_004694172.1 993444 D 261292 CDS YP_004694173.1 339482387 10932993 994275..994892 1 NC_015731.1 PFAM: PEP-CTERM bacterial; KEGG: nit:NAL212_1622 PEP motif anchor domain-containing protein; hypothetical protein 994892 10932993 Nit79A3_0904 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694173.1 994275 D 261292 CDS YP_004694174.1 339482388 10932994 complement(995025..995639) 1 NC_015731.1 KEGG: nit:NAL212_2109 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 995639 10932994 Nit79A3_0905 Nitrosomonas sp. Is79A3 5-formyltetrahydrofolate cyclo-ligase YP_004694174.1 995025 R 261292 CDS YP_004694175.1 339482389 10932995 complement(995645..996730) 1 NC_015731.1 TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; KEGG: nit:NAL212_2108 A/G-specific adenine glycosylase; SMART: HhH-GPD domain; A/G-specific adenine glycosylase 996730 10932995 Nit79A3_0906 Nitrosomonas sp. Is79A3 A/G-specific adenine glycosylase YP_004694175.1 995645 R 261292 CDS YP_004694176.1 339482390 10932996 complement(996813..997067) 1 NC_015731.1 PFAM: Modulator of Rho-dependent transcription termination; KEGG: nit:NAL212_2107 modulator of Rho-dependent transcription termination; Modulator of Rho-dependent transcription termination 997067 10932996 Nit79A3_0907 Nitrosomonas sp. Is79A3 Modulator of Rho-dependent transcription termination YP_004694176.1 996813 R 261292 CDS YP_004694177.1 339482391 10932997 997173..997517 1 NC_015731.1 KEGG: bpt:Bpet0062 hypothetical protein; HAMAP: Uncharacterised protein family UPF0060; PFAM: Uncharacterised protein family UPF0060; hypothetical protein 997517 10932997 Nit79A3_0908 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694177.1 997173 D 261292 CDS YP_004694178.1 339482392 10932998 complement(997585..998361) 1 NC_015731.1 PFAM: YcgR; Type IV pilus assembly PilZ; KEGG: nit:NAL212_2247 YcgR family protein; hypothetical protein 998361 10932998 Nit79A3_0909 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694178.1 997585 R 261292 CDS YP_004694179.1 339482393 10932999 complement(998365..998688) 1 NC_015731.1 PFAM: Type III secretion exporter; KEGG: nit:NAL212_2246 type III secretion exporter; type III secretion exporter 998688 10932999 Nit79A3_0910 Nitrosomonas sp. Is79A3 type III secretion exporter YP_004694179.1 998365 R 261292 CDS YP_004694180.1 339482394 10933000 complement(998675..999736) 1 NC_015731.1 KEGG: nit:NAL212_2245 hypothetical protein; hypothetical protein 999736 10933000 Nit79A3_0911 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694180.1 998675 R 261292 CDS YP_004694181.1 339482395 10933001 complement(999803..1000138) 1 NC_015731.1 PFAM: Flagellar export chaperone; KEGG: nit:NAL212_2244 flagellar export chaperone; flagellar export chaperone 1000138 10933001 Nit79A3_0912 Nitrosomonas sp. Is79A3 flagellar export chaperone YP_004694181.1 999803 R 261292 CDS YP_004694182.1 339482396 10933002 complement(1000170..1000598) 1 NC_015731.1 KEGG: nit:NAL212_2243 flagellar protein FliS; TIGRFAM: Flagellar protein FliS; PFAM: Flagellar protein FliS; flagellar protein FliS 1000598 10933002 Nit79A3_0913 Nitrosomonas sp. Is79A3 flagellar protein FliS YP_004694182.1 1000170 R 261292 CDS YP_004694183.1 339482397 10933003 complement(1000654..1002627) 1 NC_015731.1 PFAM: Flagellar hook-associated 2, C-terminal; Flagellar hook-associated protein 2, N-terminal; KEGG: nmu:Nmul_A1339 flagellar hook-associated 2-like; flagellar hook-associated 2 domain-containing protein 1002627 10933003 Nit79A3_0914 Nitrosomonas sp. Is79A3 flagellar hook-associated 2 domain-containing protein YP_004694183.1 1000654 R 261292 CDS YP_004694184.1 339482398 10933004 complement(1002660..1003031) 1 NC_015731.1 PFAM: Flagellar protein FlaG protein; KEGG: nit:NAL212_2241 flagellar protein FlaG protein; flagellar protein FlaG protein 1003031 10933004 Nit79A3_0915 Nitrosomonas sp. Is79A3 flagellar protein FlaG protein YP_004694184.1 1002660 R 261292 CDS YP_004694185.1 339482399 10933005 complement(1003137..1004588) 1 NC_015731.1 PFAM: Flagellin, N-terminal; Flagellin hook, IN motif; Flagellin, C-terminal; KEGG: net:Neut_1824 flagellin domain-containing protein; flagellin domain-containing protein 1004588 10933005 Nit79A3_0916 Nitrosomonas sp. Is79A3 flagellin domain-containing protein YP_004694185.1 1003137 R 261292 CDS YP_004694186.1 339482400 10933006 1004885..1006456 1 NC_015731.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; Signal transduction response regulator, receiver region; PAS fold-3; KEGG: net:Neut_1840 multi-sensor signal transduction histidine kinase; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; signal transduction histidine kinase 1006456 10933006 Nit79A3_0917 Nitrosomonas sp. Is79A3 signal transduction histidine kinase YP_004694186.1 1004885 D 261292 CDS YP_004694187.1 339482401 10933007 1006473..1007105 1 NC_015731.1 KEGG: nit:NAL212_2236 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 1007105 10933007 Nit79A3_0918 Nitrosomonas sp. Is79A3 LuxR family transcriptional regulator YP_004694187.1 1006473 D 261292 CDS YP_004694188.1 339482402 10933008 1007244..1008956 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: nit:NAL212_0942 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 1008956 10933008 Nit79A3_0919 Nitrosomonas sp. Is79A3 diguanylate cyclase YP_004694188.1 1007244 D 261292 CDS YP_004694189.1 339482403 10933009 1009163..1009963 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: nit:NAL212_1676 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 1009963 10933009 Nit79A3_0920 Nitrosomonas sp. Is79A3 diguanylate cyclase YP_004694189.1 1009163 D 261292 CDS YP_004694190.1 339482404 10933010 1010125..1011363 1 NC_015731.1 KEGG: nit:NAL212_1675 diguanylate phosphodiesterase metal dependent hydrolase domain; PFAM: Diguanylate phosphodiesterase, predicted; Metal-dependent hydrolase HDOD; SMART: Diguanylate phosphodiesterase, predicted; diguanylate phosphodiesterase with metal dependent hydrolase domain 1011363 10933010 Nit79A3_0921 Nitrosomonas sp. Is79A3 diguanylate phosphodiesterase with metal dependent hydrolase domain YP_004694190.1 1010125 D 261292 CDS YP_004694191.1 339482405 10933011 1011744..1012328 1 NC_015731.1 KEGG: nit:NAL212_1673 hypothetical protein; hypothetical protein 1012328 10933011 Nit79A3_0922 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694191.1 1011744 D 261292 CDS YP_004694192.1 339482406 10933012 1012396..1012761 1 NC_015731.1 KEGG: nit:NAL212_1672 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 1012761 10933012 Nit79A3_0923 Nitrosomonas sp. Is79A3 response regulator receiver protein YP_004694192.1 1012396 D 261292 CDS YP_004694193.1 339482407 10933013 1012905..1015082 1 NC_015731.1 KEGG: nit:NAL212_1671 CheA signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup, homodimeric; Signal transduction histidine kinase, phosphotransfer (Hpt) region; CheW-like protein; SMART: CheW-like protein; Signal transduction histidine kinase, phosphotransfer (Hpt) region; ATP-binding region, ATPase-like; CheA signal transduction histidine kinase 1015082 10933013 Nit79A3_0924 Nitrosomonas sp. Is79A3 CheA signal transduction histidine kinase YP_004694193.1 1012905 D 261292 CDS YP_004694194.1 339482408 10933014 1015156..1015668 1 NC_015731.1 KEGG: nit:NAL212_0265 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; chemotaxis protein CheW 1015668 10933014 Nit79A3_0925 Nitrosomonas sp. Is79A3 chemotaxis protein CheW YP_004694194.1 1015156 D 261292 CDS YP_004694195.1 339482409 10933015 1015732..1017468 1 NC_015731.1 KEGG: nit:NAL212_0266 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; methyl-accepting chemotaxis sensory transducer 1017468 10933015 Nit79A3_0926 Nitrosomonas sp. Is79A3 methyl-accepting chemotaxis sensory transducer YP_004694195.1 1015732 D 261292 CDS YP_004694196.1 339482410 10933016 1017835..1018701 1 NC_015731.1 KEGG: nit:NAL212_1670 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase, CheR-type; SMART: MCP methyltransferase, CheR-type; chemotaxis protein CheR 1018701 10933016 Nit79A3_0927 Nitrosomonas sp. Is79A3 chemotaxis protein CheR YP_004694196.1 1017835 D 261292 CDS YP_004694197.1 339482411 10933017 1018706..1019317 1 NC_015731.1 KEGG: nit:NAL212_1669 CheD; HAMAP: Chemoreceptor glutamine deamidase cheD; PFAM: Chemoreceptor glutamine deamidase cheD; chemotaxis protein CheD 1019317 10933017 Nit79A3_0928 Nitrosomonas sp. Is79A3 chemotaxis protein CheD YP_004694197.1 1018706 D 261292 CDS YP_004694198.1 339482412 10933018 1019355..1020434 1 NC_015731.1 HAMAP: Chemotaxis response regulator protein-glutamate methylesterase; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; Signal transduction response regulator, receiver region; KEGG: nit:NAL212_1668 response regulator receiver modulated CheB methylesterase; SMART: Signal transduction response regulator, receiver region; response regulator receiver modulated CheB methylesterase 1020434 10933018 Nit79A3_0929 Nitrosomonas sp. Is79A3 response regulator receiver modulated CheB methylesterase YP_004694198.1 1019355 D 261292 CDS YP_004694199.1 339482413 10933019 1020488..1020982 1 NC_015731.1 PFAM: NLP/P60; KEGG: nit:NAL212_1667 NLP/P60 protein; NLP/P60 protein 1020982 10933019 Nit79A3_0930 Nitrosomonas sp. Is79A3 NLP/P60 protein YP_004694199.1 1020488 D 261292 CDS YP_004694200.1 339482414 10933020 1021133..1021450 1 NC_015731.1 KEGG: nit:NAL212_3088 lipase; lipase 1021450 10933020 Nit79A3_0931 Nitrosomonas sp. Is79A3 lipase YP_004694200.1 1021133 D 261292 CDS YP_004694201.1 339482415 10933022 complement(1021967..1022539) 1 NC_015731.1 KEGG: afr:AFE_2093 hypothetical protein; hypothetical protein 1022539 10933022 Nit79A3_0933 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694201.1 1021967 R 261292 CDS YP_004694202.1 339482416 10933023 1022591..1022881 1 NC_015731.1 KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein 1022881 10933023 Nit79A3_0934 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694202.1 1022591 D 261292 CDS YP_004694203.1 339482417 10933024 1022872..1023219 1 NC_015731.1 KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein 1023219 10933024 Nit79A3_0935 Nitrosomonas sp. Is79A3 IS66 Orf2 family protein YP_004694203.1 1022872 D 261292 CDS YP_004694204.1 339482418 10933025 1023269..1024852 1 NC_015731.1 KEGG: nit:NAL212_0062 transposase IS66; manually curated; PFAM: Transposase, IS66; transposase IS66 1024852 10933025 Nit79A3_0936 Nitrosomonas sp. Is79A3 transposase IS66 YP_004694204.1 1023269 D 261292 CDS YP_004694205.1 339482419 10933026 complement(1024779..1025969) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: bxe:Bxe_C1199 hypothetical protein; transposase IS4 family protein 1025969 10933026 Nit79A3_0937 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694205.1 1024779 R 261292 CDS YP_004694206.1 339482420 10933028 complement(1026705..1028216) 1 NC_015731.1 TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: nit:NAL212_1204 Mg chelatase, subunit ChlI; SMART: ATPase, AAA+ type, core; Mg chelatase subunit ChlI 1028216 10933028 Nit79A3_0939 Nitrosomonas sp. Is79A3 Mg chelatase subunit ChlI YP_004694206.1 1026705 R 261292 CDS YP_004694207.1 339482421 10933029 complement(1028294..1028602) 1 NC_015731.1 PFAM: Protein of unknown function DUF526; KEGG: nit:NAL212_1205 hypothetical protein; hypothetical protein 1028602 10933029 Nit79A3_0940 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694207.1 1028294 R 261292 CDS YP_004694208.1 339482422 10933030 1028825..1029829 1 NC_015731.1 PFAM: Aminoglycoside phosphotransferase; KEGG: nit:NAL212_1206 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 1029829 10933030 Nit79A3_0941 Nitrosomonas sp. Is79A3 aminoglycoside phosphotransferase YP_004694208.1 1028825 D 261292 CDS YP_004694209.1 339482423 10933031 1029849..1030547 1 NC_015731.1 PFAM: Nucleotidyl transferase; KEGG: nit:NAL212_1207 nucleotidyl transferase; Nucleotidyl transferase 1030547 10933031 Nit79A3_0942 Nitrosomonas sp. Is79A3 Nucleotidyl transferase YP_004694209.1 1029849 D 261292 CDS YP_004694210.1 339482424 10933032 1030588..1031895 1 NC_015731.1 PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; KEGG: nit:NAL212_1208 peptidase M24; peptidase M24 1031895 10933032 Nit79A3_0943 Nitrosomonas sp. Is79A3 peptidase M24 YP_004694210.1 1030588 D 261292 CDS YP_004694211.1 339482425 10933033 1031892..1032263 1 NC_015731.1 KEGG: nit:NAL212_1209 hypothetical protein; hypothetical protein 1032263 10933033 Nit79A3_0944 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694211.1 1031892 D 261292 CDS YP_004694212.1 339482426 10933034 1032617..1033816 1 NC_015731.1 TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: nit:NAL212_0868 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 1033816 10933034 Nit79A3_0945 Nitrosomonas sp. Is79A3 metal dependent phosphohydrolase YP_004694212.1 1032617 D 261292 CDS YP_004694213.1 339482427 10933035 complement(1033881..1034642) 1 NC_015731.1 TIGRFAM: tRNA (guanine-N-7) methyltransferase; HAMAP: tRNA (guanine-N(7)-)-methyltransferase; KEGG: nit:NAL212_1398 tRNA (guanine-N(7)-)-methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 1034642 10933035 Nit79A3_0946 Nitrosomonas sp. Is79A3 tRNA (guanine-N(7)-)-methyltransferase YP_004694213.1 1033881 R 261292 CDS YP_004694214.1 339482428 10933036 complement(1034581..1035405) 1 NC_015731.1 KEGG: nit:NAL212_1399 thiazole biosynthesis family protein; HAMAP: Thiazole biosynthesis; PFAM: Thiazole biosynthesis; Thiazole synthase 1035405 10933036 Nit79A3_0947 Nitrosomonas sp. Is79A3 Thiazole synthase YP_004694214.1 1034581 R 261292 CDS YP_004694215.1 339482429 10933037 complement(1035453..1035656) 1 NC_015731.1 KEGG: nit:NAL212_1400 thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS; thiamine biosynthesis protein ThiS 1035656 10933037 Nit79A3_0948 Nitrosomonas sp. Is79A3 thiamine biosynthesis protein ThiS YP_004694215.1 1035453 R 261292 CDS YP_004694216.1 339482430 10933038 1035973..1036608 1 NC_015731.1 hypothetical protein 1036608 10933038 Nit79A3_0949 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694216.1 1035973 D 261292 CDS YP_004694217.1 339482431 10933039 complement(1036886..1037875) 1 NC_015731.1 PFAM: Peptidase M10, serralysin, C-terminal; Haemolysin-type calcium-binding region; KEGG: rsk:RSKD131_3707 hemolysin-type calcium-binding region, RTX; peptidase M10 serralysin 1037875 10933039 Nit79A3_0950 Nitrosomonas sp. Is79A3 peptidase M10 serralysin YP_004694217.1 1036886 R 261292 CDS YP_004694218.1 339482432 10933042 1040121..1041599 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: pph:Ppha_2646 hypothetical protein; transposase IS4 family protein 1041599 10933042 Nit79A3_0953 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694218.1 1040121 D 261292 CDS YP_004694219.1 339482433 10933044 1043155..1044372 1 NC_015731.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; KEGG: nhl:Nhal_1988 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 1044372 10933044 Nit79A3_0955 Nitrosomonas sp. Is79A3 transposase IS116/IS110/IS902 family protein YP_004694219.1 1043155 D 261292 CDS YP_004694220.1 339482434 10933045 1044626..1045117 1 NC_015731.1 PFAM: Protein of unknown function DUF46; KEGG: mno:Mnod_8082 protein of unknown function DUF46; hypothetical protein 1045117 10933045 Nit79A3_0956 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694220.1 1044626 D 261292 CDS YP_004694221.1 339482435 10933046 complement(1045124..1046059) 1 NC_015731.1 PFAM: Metallophosphoesterase; KEGG: msl:Msil_1866 metallophosphoesterase; metallophosphoesterase 1046059 10933046 Nit79A3_0957 Nitrosomonas sp. Is79A3 metallophosphoesterase YP_004694221.1 1045124 R 261292 CDS YP_004694222.1 339482436 10933047 1046244..1049747 1 NC_015731.1 KEGG: ecg:E2348C_2622 predicted helicase; PFAM: SNF2-related; Zinc finger, SWIM-type; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SNF2-like protein 1049747 10933047 Nit79A3_0958 Nitrosomonas sp. Is79A3 SNF2-like protein YP_004694222.1 1046244 D 261292 CDS YP_004694223.1 339482437 10933048 1049922..1050299 1 NC_015731.1 KEGG: tgr:Tgr7_0613 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 1050299 10933048 Nit79A3_0959 Nitrosomonas sp. Is79A3 helix-turn-helix domain-containing protein YP_004694223.1 1049922 D 261292 CDS YP_004694224.1 339482438 10933049 1050316..1051635 1 NC_015731.1 PFAM: HipA-like, C-terminal; HipA-like, N-terminal; KEGG: cph:Cpha266_2264 HipA domain-containing protein; HipA domain-containing protein 1051635 10933049 Nit79A3_0960 Nitrosomonas sp. Is79A3 HipA domain-containing protein YP_004694224.1 1050316 D 261292 CDS YP_004694225.1 339482439 10933050 1051790..1052227 1 NC_015731.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nit:NAL212_0903 GCN5-like N-acetyltransferase; GCN5-like N-acetyltransferase 1052227 10933050 Nit79A3_0961 Nitrosomonas sp. Is79A3 GCN5-like N-acetyltransferase YP_004694225.1 1051790 D 261292 CDS YP_004694226.1 339482440 10933051 1052439..1053254 1 NC_015731.1 KEGG: gca:Galf_0890 hypothetical protein; hypothetical protein 1053254 10933051 Nit79A3_0962 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694226.1 1052439 D 261292 CDS YP_004694227.1 339482441 10933052 complement(1053312..1053449) 1 NC_015731.1 hypothetical protein 1053449 10933052 Nit79A3_0963 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694227.1 1053312 R 261292 CDS YP_004694228.1 339482442 10933053 complement(1053397..1055001) 1 NC_015731.1 manually curated; PFAM: ABC transporter-like; KEGG: nit:NAL212_2655 ABC transporter-like protein; SMART: ATPase, AAA+ type, core; ABC transporter 1055001 10933053 Nit79A3_0964 Nitrosomonas sp. Is79A3 ABC transporter YP_004694228.1 1053397 R 261292 CDS YP_004694229.1 339482443 10933054 1055297..1055746 1 NC_015731.1 hypothetical protein 1055746 10933054 Nit79A3_0965 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694229.1 1055297 D 261292 CDS YP_004694230.1 339482444 10933055 complement(1055986..1056687) 1 NC_015731.1 hypothetical protein 1056687 10933055 Nit79A3_0966 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694230.1 1055986 R 261292 CDS YP_004694231.1 339482445 10933056 complement(1056975..1059188) 1 NC_015731.1 PFAM: Endonuclease/exonuclease/phosphatase; hypothetical protein 1059188 10933056 Nit79A3_0967 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694231.1 1056975 R 261292 CDS YP_004694232.1 339482446 10933057 complement(1059341..1060600) 1 NC_015731.1 PFAM: Major facilitator superfamily MFS-1; KEGG: nit:NAL212_2636 major facilitator superfamily MFS_1; major facilitator superfamily protein 1060600 10933057 Nit79A3_0968 Nitrosomonas sp. Is79A3 major facilitator superfamily protein YP_004694232.1 1059341 R 261292 CDS YP_004694233.1 339482447 10933058 1061238..1061885 1 NC_015731.1 KEGG: nha:Nham_3051 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1061885 10933058 Nit79A3_0969 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004694233.1 1061238 D 261292 CDS YP_004694234.1 339482448 10933059 complement(1062118..1062546) 1 NC_015731.1 PFAM: PilT protein, N-terminal; KEGG: noc:Noc_1461 PilT-like protein; twitching motility protein PilT 1062546 10933059 Nit79A3_0970 Nitrosomonas sp. Is79A3 twitching motility protein PilT YP_004694234.1 1062118 R 261292 CDS YP_004694235.1 339482449 10933060 complement(1062536..1062769) 1 NC_015731.1 KEGG: noc:Noc_1462 hypothetical protein; hypothetical protein 1062769 10933060 Nit79A3_0971 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694235.1 1062536 R 261292 CDS YP_004694236.1 339482450 10933061 complement(1062824..1063786) 1 NC_015731.1 PFAM: Methyltransferase type 12; KEGG: nit:NAL212_1395 ribosomal RNA adenine methylase transferase; type 12 methyltransferase 1063786 10933061 Nit79A3_0972 Nitrosomonas sp. Is79A3 type 12 methyltransferase YP_004694236.1 1062824 R 261292 CDS YP_004694237.1 339482451 10933062 1064136..1065428 1 NC_015731.1 PFAM: Protein of unknown function DUF2130; KEGG: nit:NAL212_1747 hypothetical protein; hypothetical protein 1065428 10933062 Nit79A3_0973 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694237.1 1064136 D 261292 CDS YP_004694238.1 339482452 10933063 complement(1065499..1066395) 1 NC_015731.1 hypothetical protein 1066395 10933063 Nit79A3_0974 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694238.1 1065499 R 261292 CDS YP_004694239.1 339482453 10933064 complement(1066642..1066824) 1 NC_015731.1 hypothetical protein 1066824 10933064 Nit79A3_0975 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694239.1 1066642 R 261292 CDS YP_004694240.1 339482454 10933065 complement(1066821..1067168) 1 NC_015731.1 KEGG: nit:NAL212_2030 hypothetical protein; hypothetical protein 1067168 10933065 Nit79A3_0976 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694240.1 1066821 R 261292 CDS YP_004694241.1 339482455 10933066 complement(1067381..1067497) 1 NC_015731.1 hypothetical protein 1067497 10933066 Nit79A3_0977 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694241.1 1067381 R 261292 CDS YP_004694242.1 339482456 10933067 complement(1067592..1067945) 1 NC_015731.1 PFAM: BRO, N-terminal; KEGG: lhk:LHK_01667 bacteriophage antirepressor; prophage antirepressor 1067945 10933067 Nit79A3_0978 Nitrosomonas sp. Is79A3 prophage antirepressor YP_004694242.1 1067592 R 261292 CDS YP_004694243.1 339482457 10933068 1068498..1068833 1 NC_015731.1 KEGG: nit:NAL212_2551 hypothetical protein; hypothetical protein 1068833 10933068 Nit79A3_0979 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694243.1 1068498 D 261292 CDS YP_004694244.1 339482458 10933069 1069244..1069738 1 NC_015731.1 hypothetical protein 1069738 10933069 Nit79A3_0980 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694244.1 1069244 D 261292 CDS YP_004694245.1 339482459 10933070 complement(1069819..1070046) 1 NC_015731.1 hypothetical protein 1070046 10933070 Nit79A3_0981 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694245.1 1069819 R 261292 CDS YP_004694246.1 339482460 10933071 complement(1070320..1071597) 1 NC_015731.1 PFAM: SEC-C motif; KEGG: ppd:Ppro_2581 SecC motif-containing protein; SEC-C motif domain-containing protein 1071597 10933071 Nit79A3_0982 Nitrosomonas sp. Is79A3 SEC-C motif domain-containing protein YP_004694246.1 1070320 R 261292 CDS YP_004694247.1 339482461 10933072 complement(1071684..1072049) 1 NC_015731.1 KEGG: nit:NAL212_1665 hypothetical protein; hypothetical protein 1072049 10933072 Nit79A3_0983 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694247.1 1071684 R 261292 CDS YP_004694248.1 339482462 10933073 1072553..1073143 1 NC_015731.1 KEGG: lch:Lcho_2324 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1073143 10933073 Nit79A3_0984 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004694248.1 1072553 D 261292 CDS YP_004694249.1 339482463 10933075 complement(1074677..1075399) 1 NC_015731.1 PFAM: Protein of unknown function DUF81; KEGG: bco:Bcell_3693 protein of unknown function DUF81; hypothetical protein 1075399 10933075 Nit79A3_0986 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694249.1 1074677 R 261292 CDS YP_004694250.1 339482464 10933076 complement(1075479..1076141) 1 NC_015731.1 KEGG: rfr:Rfer_2484 hypothetical protein; hypothetical protein 1076141 10933076 Nit79A3_0987 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694250.1 1075479 R 261292 CDS YP_004694251.1 339482465 10933077 complement(1076462..1076998) 1 NC_015731.1 KEGG: gca:Galf_0997 hypothetical protein; hypothetical protein 1076998 10933077 Nit79A3_0988 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694251.1 1076462 R 261292 CDS YP_004694252.1 339482466 10933082 complement(1078983..1080641) 1 NC_015731.1 KEGG: nit:NAL212_1525 hypothetical protein; hypothetical protein 1080641 10933082 Nit79A3_0990 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694252.1 1078983 R 261292 CDS YP_004694253.1 339482467 10933083 complement(1081113..1081973) 1 NC_015731.1 PFAM: Diguanylate phosphodiesterase, predicted; KEGG: nit:NAL212_2092 EAL domain-containing protein; diguanylate phosphodiesterase 1081973 10933083 Nit79A3_0991 Nitrosomonas sp. Is79A3 diguanylate phosphodiesterase YP_004694253.1 1081113 R 261292 CDS YP_004694254.1 339482468 10933084 complement(1082090..1083190) 1 NC_015731.1 TIGRFAM: Sulphate transport system permease 1; PFAM: ABC transporter-like; KEGG: nit:NAL212_2091 sulfate ABC transporter, ATPase subunit; SMART: ATPase, AAA+ type, core; sulfate ABC transporter ATPase subunit 1083190 10933084 Nit79A3_0992 Nitrosomonas sp. Is79A3 sulfate ABC transporter ATPase subunit YP_004694254.1 1082090 R 261292 CDS YP_004694255.1 339482469 10933085 complement(1083187..1084107) 1 NC_015731.1 KEGG: nit:NAL212_2090 sulfate ABC transporter, inner membrane subunit CysW; TIGRFAM: Sulphate ABC transporter, permease CysW; Sulphate ABC transporter permease 2; PFAM: Binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter inner membrane subunit CysW 1084107 10933085 Nit79A3_0993 Nitrosomonas sp. Is79A3 sulfate ABC transporter inner membrane subunit CysW YP_004694255.1 1083187 R 261292 CDS YP_004694256.1 339482470 10933086 complement(1084074..1084907) 1 NC_015731.1 KEGG: nit:NAL212_2089 sulfate ABC transporter, inner membrane subunit CysT; TIGRFAM: Sulphate ABC transporter, permease CysT; Sulphate ABC transporter permease 2; PFAM: Binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter inner membrane subunit CysT 1084907 10933086 Nit79A3_0994 Nitrosomonas sp. Is79A3 sulfate ABC transporter inner membrane subunit CysT YP_004694256.1 1084074 R 261292 CDS YP_004694257.1 339482471 10933087 complement(1084958..1085782) 1 NC_015731.1 KEGG: nit:NAL212_2088 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted; diguanylate phosphodiesterase 1085782 10933087 Nit79A3_0995 Nitrosomonas sp. Is79A3 diguanylate phosphodiesterase YP_004694257.1 1084958 R 261292 CDS YP_004694258.1 339482472 10933088 complement(1085883..1086224) 1 NC_015731.1 PFAM: Uncharacterised conserved protein UCP020408; KEGG: neu:NE0581 diverged CheY-domain-containing protein; hypothetical protein 1086224 10933088 Nit79A3_0996 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694258.1 1085883 R 261292 CDS YP_004694259.1 339482473 10933089 complement(1086273..1087271) 1 NC_015731.1 KEGG: nit:NAL212_2087 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: Thiosulphate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; sulfate ABC transporter periplasmic sulfate-binding protein 1087271 10933089 Nit79A3_0997 Nitrosomonas sp. Is79A3 sulfate ABC transporter periplasmic sulfate-binding protein YP_004694259.1 1086273 R 261292 CDS YP_004694260.1 339482474 10933090 complement(1087303..1088973) 1 NC_015731.1 KEGG: nit:NAL212_2086 hypothetical protein; hypothetical protein 1088973 10933090 Nit79A3_0998 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694260.1 1087303 R 261292 CDS YP_004694261.1 339482475 10933091 complement(1089119..1089340) 1 NC_015731.1 PFAM: Protein of unknown function DUF2292; KEGG: nit:NAL212_2085 hypothetical protein; hypothetical protein 1089340 10933091 Nit79A3_0999 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694261.1 1089119 R 261292 CDS YP_004694262.1 339482476 10933092 1089624..1090058 1 NC_015731.1 KEGG: nit:NAL212_1526 hypothetical protein; hypothetical protein 1090058 10933092 Nit79A3_1000 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694262.1 1089624 D 261292 CDS YP_004694263.1 339482477 10933093 complement(1090080..1091186) 1 NC_015731.1 PFAM: Lytic transglycosylase-like, catalytic; KEGG: nit:NAL212_2795 lytic transglycosylase catalytic; lytic transglycosylase 1091186 10933093 Nit79A3_1001 Nitrosomonas sp. Is79A3 lytic transglycosylase YP_004694263.1 1090080 R 261292 CDS YP_004694264.1 339482478 10933094 1091843..1092430 1 NC_015731.1 KEGG: eli:ELI_09275 hypothetical protein; hypothetical protein 1092430 10933094 Nit79A3_1002 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694264.1 1091843 D 261292 CDS YP_004694265.1 339482479 10933095 1092427..1093290 1 NC_015731.1 KEGG: eli:ELI_09280 hypothetical protein; hypothetical protein 1093290 10933095 Nit79A3_1003 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694265.1 1092427 D 261292 CDS YP_004694266.1 339482480 10933096 1093322..1095256 1 NC_015731.1 KEGG: eli:ELI_09285 phage tail sheath protein; phage tail sheath protein 1095256 10933096 Nit79A3_1004 Nitrosomonas sp. Is79A3 phage tail sheath protein YP_004694266.1 1093322 D 261292 CDS YP_004694267.1 339482481 10933097 1095268..1095720 1 NC_015731.1 KEGG: eli:ELI_09290 phage tail region protein; TIGRFAM: Conserved hypothetical protein CHP02241, phage tail region protein; PFAM: Conserved hypothetical protein CHP02241, phage tail region protein; hypothetical protein 1095720 10933097 Nit79A3_1005 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694267.1 1095268 D 261292 CDS YP_004694268.1 339482482 10933098 1095726..1098653 1 NC_015731.1 KEGG: eli:ELI_09295 hypothetical protein; hypothetical protein 1098653 10933098 Nit79A3_1006 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694268.1 1095726 D 261292 CDS YP_004694269.1 339482483 10933099 1098656..1099123 1 NC_015731.1 KEGG: eli:ELI_09300 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02241, phage tail region protein; PFAM: Conserved hypothetical protein CHP02241, phage tail region protein; hypothetical protein 1099123 10933099 Nit79A3_1007 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694269.1 1098656 D 261292 CDS YP_004694270.1 339482484 10933100 1099129..1099818 1 NC_015731.1 PFAM: Peptidoglycan-binding lysin domain; KEGG: eli:ELI_09305 hypothetical protein; peptidoglycan-binding lysin domain-containing protein 1099818 10933100 Nit79A3_1008 Nitrosomonas sp. Is79A3 peptidoglycan-binding lysin domain-containing protein YP_004694270.1 1099129 D 261292 CDS YP_004694271.1 339482485 10933101 1099962..1100138 1 NC_015731.1 hypothetical protein 1100138 10933101 Nit79A3_1009 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694271.1 1099962 D 261292 CDS YP_004694272.1 339482486 10933102 1100173..1101243 1 NC_015731.1 KEGG: eli:ELI_09315 hypothetical protein; hypothetical protein 1101243 10933102 Nit79A3_1010 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694272.1 1100173 D 261292 CDS YP_004694273.1 339482487 10933103 1101243..1101965 1 NC_015731.1 PFAM: Rhs element Vgr protein; KEGG: eli:ELI_09320 hypothetical protein; Rhs element Vgr protein 1101965 10933103 Nit79A3_1011 Nitrosomonas sp. Is79A3 Rhs element Vgr protein YP_004694273.1 1101243 D 261292 CDS YP_004694274.1 339482488 10933104 1101970..1104093 1 NC_015731.1 KEGG: eli:ELI_09325 hypothetical protein; hypothetical protein 1104093 10933104 Nit79A3_1012 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694274.1 1101970 D 261292 CDS YP_004694275.1 339482489 10933105 1104090..1104488 1 NC_015731.1 PFAM: GPW/gp25; KEGG: eli:ELI_09330 tail lysozyme; GPW/gp25 family protein 1104488 10933105 Nit79A3_1013 Nitrosomonas sp. Is79A3 GPW/gp25 family protein YP_004694275.1 1104090 D 261292 CDS YP_004694276.1 339482490 10933106 1104507..1106870 1 NC_015731.1 TIGRFAM: Conserved hypothetical protein CHP02243; KEGG: eli:ELI_09335 hypothetical protein; hypothetical protein 1106870 10933106 Nit79A3_1014 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694276.1 1104507 D 261292 CDS YP_004694277.1 339482491 10933107 1106870..1109812 1 NC_015731.1 TIGRFAM: Phage tail protein; KEGG: eli:ELI_09340 NHL repeat-containing protein; phage tail protein 1109812 10933107 Nit79A3_1015 Nitrosomonas sp. Is79A3 phage tail protein YP_004694277.1 1106870 D 261292 CDS YP_004694278.1 339482492 10933108 1109855..1111207 1 NC_015731.1 KEGG: eli:ELI_09345 hypothetical protein; hypothetical protein 1111207 10933108 Nit79A3_1016 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694278.1 1109855 D 261292 CDS YP_004694279.1 339482493 10933109 1111224..1112504 1 NC_015731.1 KEGG: eli:ELI_09350 hypothetical protein; hypothetical protein 1112504 10933109 Nit79A3_1017 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694279.1 1111224 D 261292 CDS YP_004694280.1 339482494 10933110 1112535..1113908 1 NC_015731.1 KEGG: eli:ELI_09355 hypothetical protein; hypothetical protein 1113908 10933110 Nit79A3_1018 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694280.1 1112535 D 261292 CDS YP_004694281.1 339482495 10933111 1114023..1115969 1 NC_015731.1 KEGG: eli:ELI_09360 hypothetical protein; hypothetical protein 1115969 10933111 Nit79A3_1019 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694281.1 1114023 D 261292 CDS YP_004694282.1 339482496 10933112 1115997..1118003 1 NC_015731.1 KEGG: eli:ELI_09365 hypothetical protein; hypothetical protein 1118003 10933112 Nit79A3_1020 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694282.1 1115997 D 261292 CDS YP_004694283.1 339482497 10933113 1118000..1120054 1 NC_015731.1 KEGG: eli:ELI_09370 ATPase, AAA family protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; ATPase AAA 1120054 10933113 Nit79A3_1021 Nitrosomonas sp. Is79A3 ATPase AAA YP_004694283.1 1118000 D 261292 CDS YP_004694284.1 339482498 10933114 1120061..1123237 1 NC_015731.1 KEGG: nml:Namu_1897 hypothetical protein; hypothetical protein 1123237 10933114 Nit79A3_1022 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694284.1 1120061 D 261292 CDS YP_004694285.1 339482499 10933115 1123289..1123753 1 NC_015731.1 KEGG: aex:Astex_1861 hypothetical protein; hypothetical protein 1123753 10933115 Nit79A3_1023 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694285.1 1123289 D 261292 CDS YP_004694286.1 339482500 10933116 1123862..1124350 1 NC_015731.1 PFAM: Protein of unknown function DUF1311; KEGG: ppw:PputW619_4365 hypothetical protein; hypothetical protein 1124350 10933116 Nit79A3_1024 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694286.1 1123862 D 261292 CDS YP_004694287.1 339482501 10933117 1124374..1125057 1 NC_015731.1 KEGG: pla:Plav_0939 peptidoglycan-binding domain-containing protein; peptidoglycan-binding domain-containing protein 1125057 10933117 Nit79A3_1025 Nitrosomonas sp. Is79A3 peptidoglycan-binding domain-containing protein YP_004694287.1 1124374 D 261292 CDS YP_004694288.1 339482502 10933118 1125303..1125863 1 NC_015731.1 KEGG: bco:Bcell_1138 hypothetical protein; hypothetical protein 1125863 10933118 Nit79A3_1026 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694288.1 1125303 D 261292 CDS YP_004694289.1 339482503 10933119 1126116..1127078 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 1127078 10933119 Nit79A3_1027 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694289.1 1126116 D 261292 CDS YP_004694290.1 339482504 10933120 complement(1127507..1128337) 1 NC_015731.1 KEGG: pno:SNOG_05888 hypothetical protein; hypothetical protein 1128337 10933120 Nit79A3_1028 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694290.1 1127507 R 261292 CDS YP_004694291.1 339482505 10933121 complement(1128765..1129082) 1 NC_015731.1 hypothetical protein 1129082 10933121 Nit79A3_1029 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694291.1 1128765 R 261292 CDS YP_004694292.1 339482506 10933122 complement(1129773..1130054) 1 NC_015731.1 PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: nit:NAL212_0911 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1130054 10933122 Nit79A3_1030 Nitrosomonas sp. Is79A3 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004694292.1 1129773 R 261292 CDS YP_004694293.1 339482507 10933123 1130213..1130878 1 NC_015731.1 KEGG: nit:NAL212_0912 Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 1130878 10933123 Nit79A3_1031 Nitrosomonas sp. Is79A3 ABC transporter YP_004694293.1 1130213 D 261292 CDS YP_004694294.1 339482508 10933124 1130875..1133424 1 NC_015731.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: nit:NAL212_0913 hypothetical protein; hypothetical protein 1133424 10933124 Nit79A3_1032 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694294.1 1130875 D 261292 CDS YP_004694295.1 339482509 10933125 1133424..1134533 1 NC_015731.1 PFAM: Protein of unknown function DUF2006; KEGG: nit:NAL212_0914 hydroxyneurosporene synthase; hypothetical protein 1134533 10933125 Nit79A3_1033 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694295.1 1133424 D 261292 CDS YP_004694296.1 339482510 10933126 1134920..1135027 1 NC_015731.1 KEGG: nit:NAL212_0915 hypothetical protein; hypothetical protein 1135027 10933126 Nit79A3_1034 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694296.1 1134920 D 261292 CDS YP_004694297.1 339482511 10933127 complement(1135411..1135620) 1 NC_015731.1 PFAM: Heavy metal transport/detoxification protein; KEGG: nit:NAL212_0804 heavy metal transport/detoxification protein; Heavy metal transport/detoxification protein 1135620 10933127 Nit79A3_1035 Nitrosomonas sp. Is79A3 Heavy metal transport/detoxification protein YP_004694297.1 1135411 R 261292 CDS YP_004694298.1 339482512 10933128 complement(1135651..1137999) 1 NC_015731.1 KEGG: nmu:Nmul_A2276 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase 1137999 10933128 Nit79A3_1036 Nitrosomonas sp. Is79A3 heavy metal translocating P-type ATPase YP_004694298.1 1135651 R 261292 CDS YP_004694299.1 339482513 10933129 complement(1138145..1138762) 1 NC_015731.1 KEGG: nit:NAL212_0806 hypothetical protein; hypothetical protein 1138762 10933129 Nit79A3_1037 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694299.1 1138145 R 261292 CDS YP_004694300.1 339482514 10933130 complement(1138883..1139677) 1 NC_015731.1 KEGG: nit:NAL212_0807 sec-independent protein translocase, TatC subunit; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase, TatC subunit 1139677 10933130 Nit79A3_1038 Nitrosomonas sp. Is79A3 Sec-independent protein translocase, TatC subunit YP_004694300.1 1138883 R 261292 CDS YP_004694301.1 339482515 10933131 complement(1139743..1140141) 1 NC_015731.1 TIGRFAM: Twin-arginine translocation protein TatB; HAMAP: Twin-arginine translocation protein TatB; KEGG: nit:NAL212_0808 twin-arginine translocation protein, TatB subunit; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; Sec-independent protein translocase tatB-like protein 1140141 10933131 Nit79A3_1039 Nitrosomonas sp. Is79A3 Sec-independent protein translocase tatB-like protein YP_004694301.1 1139743 R 261292 CDS YP_004694302.1 339482516 10933132 complement(1140227..1140568) 1 NC_015731.1 TIGRFAM: Twin-arginine translocation protein TatA/E; HAMAP: Twin-arginine translocation protein TatA/E; KEGG: nit:NAL212_0809 twin-arginine translocation protein, TatA/E family subunit; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; Sec-independent protein translocase tatA/E-like protein 1140568 10933132 Nit79A3_1040 Nitrosomonas sp. Is79A3 Sec-independent protein translocase tatA/E-like protein YP_004694302.1 1140227 R 261292 CDS YP_004694303.1 339482517 10933133 complement(1140601..1140951) 1 NC_015731.1 PFAM: Histidine triad (HIT) protein; KEGG: nit:NAL212_0810 histidine triad (HIT) protein; histidine triad (HIT) protein 1140951 10933133 Nit79A3_1041 Nitrosomonas sp. Is79A3 histidine triad (HIT) protein YP_004694303.1 1140601 R 261292 CDS YP_004694304.1 339482518 10933134 complement(1140955..1141281) 1 NC_015731.1 TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; HAMAP: Phosphoribosyl-ATP pyrophosphatase; KEGG: nit:NAL212_0811 phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-ATP pyrophosphatase 1141281 10933134 Nit79A3_1042 Nitrosomonas sp. Is79A3 Phosphoribosyl-ATP pyrophosphatase YP_004694304.1 1140955 R 261292 CDS YP_004694305.1 339482519 10933135 complement(1141278..1141745) 1 NC_015731.1 KEGG: nit:NAL212_0812 phosphoribosyl-AMP cyclohydrolase; HAMAP: Phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-AMP cyclohydrolase 1141745 10933135 Nit79A3_1043 Nitrosomonas sp. Is79A3 Phosphoribosyl-AMP cyclohydrolase YP_004694305.1 1141278 R 261292 CDS YP_004694306.1 339482520 10933136 complement(1141723..1142496) 1 NC_015731.1 TIGRFAM: Histidine biosynthesis, HisF; HAMAP: Imidazole glycerol phosphate synthase subunit hisF; KEGG: nit:NAL212_0813 imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis; imidazole glycerol phosphate synthase subunit HisF 1142496 10933136 Nit79A3_1044 Nitrosomonas sp. Is79A3 imidazole glycerol phosphate synthase subunit HisF YP_004694306.1 1141723 R 261292 CDS YP_004694307.1 339482521 10933137 complement(1142568..1143323) 1 NC_015731.1 TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; HAMAP: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; KEGG: nit:NAL212_0814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: Histidine biosynthesis; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] 1143323 10933137 Nit79A3_1045 Nitrosomonas sp. Is79A3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] YP_004694307.1 1142568 R 261292 CDS YP_004694308.1 339482522 10933138 complement(1143378..1144022) 1 NC_015731.1 TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; HAMAP: Imidazole glycerol phosphate synthase, subunit H; KEGG: nit:NAL212_0815 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: Glutamine amidotransferase class-I, C-terminal; imidazole glycerol phosphate synthase subunit HisH 1144022 10933138 Nit79A3_1046 Nitrosomonas sp. Is79A3 imidazole glycerol phosphate synthase subunit HisH YP_004694308.1 1143378 R 261292 CDS YP_004694309.1 339482523 10933139 complement(1144049..1144636) 1 NC_015731.1 KEGG: nit:NAL212_0816 imidazoleglycerol-phosphate dehydratase; HAMAP: Imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase; Imidazoleglycerol-phosphate dehydratase 1144636 10933139 Nit79A3_1047 Nitrosomonas sp. Is79A3 Imidazoleglycerol-phosphate dehydratase YP_004694309.1 1144049 R 261292 CDS YP_004694310.1 339482524 10933140 complement(1144678..1145763) 1 NC_015731.1 TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: nit:NAL212_0817 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/II; Histidinol-phosphate aminotransferase 1145763 10933140 Nit79A3_1048 Nitrosomonas sp. Is79A3 Histidinol-phosphate aminotransferase YP_004694310.1 1144678 R 261292 CDS YP_004694311.1 339482525 10933141 complement(1145858..1146742) 1 NC_015731.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: gpb:HDN1F_37290 hypothetical protein; signal transduction protein 1146742 10933141 Nit79A3_1049 Nitrosomonas sp. Is79A3 signal transduction protein YP_004694311.1 1145858 R 261292 CDS YP_004694312.1 339482526 10933142 complement(1146908..1148095) 1 NC_015731.1 PFAM: Protein of unknown function DUF185; KEGG: nit:NAL212_0818 hypothetical protein; hypothetical protein 1148095 10933142 Nit79A3_1050 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694312.1 1146908 R 261292 CDS YP_004694313.1 339482527 10933143 1148180..1148920 1 NC_015731.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nit:NAL212_0819 3-oxoacyl-(acyl-carrier-protein) reductase; short-chain dehydrogenase/reductase SDR 1148920 10933143 Nit79A3_1051 Nitrosomonas sp. Is79A3 short-chain dehydrogenase/reductase SDR YP_004694313.1 1148180 D 261292 CDS YP_004694314.1 339482528 10933144 complement(1149030..1149905) 1 NC_015731.1 PFAM: Integrase, catalytic core; KEGG: rso:RSp0548 ISRSO8-transposase orfB protein; Integrase catalytic subunit 1149905 10933144 Nit79A3_1052 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004694314.1 1149030 R 261292 CDS YP_004694315.1 339482529 10933145 complement(1149902..1150195) 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: gca:Galf_0832 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1150195 10933145 Nit79A3_1053 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004694315.1 1149902 R 261292 CDS YP_004694316.1 339482530 10933146 complement(1150377..1150715) 1 NC_015731.1 TIGRFAM: Uncharacterised protein family UPF0102; HAMAP: Uncharacterised protein family UPF0102; KEGG: nit:NAL212_2320 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; hypothetical protein 1150715 10933146 Nit79A3_1054 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694316.1 1150377 R 261292 CDS YP_004694317.1 339482531 10933147 complement(1150702..1151820) 1 NC_015731.1 PFAM: LppC lipoprotein; KEGG: nit:NAL212_2321 LppC family lipoprotein; LppC family lipoprotein 1151820 10933147 Nit79A3_1055 Nitrosomonas sp. Is79A3 LppC family lipoprotein YP_004694317.1 1150702 R 261292 CDS YP_004694318.1 339482532 10933148 1151831..1152676 1 NC_015731.1 TIGRFAM: Uncharacterised protein family UPF0011; HAMAP: Ribosomal RNA small subunit methyltransferase I; KEGG: nit:NAL212_2322 hypothetical protein; PFAM: Tetrapyrrole methylase; Ribosomal RNA small subunit methyltransferase I 1152676 10933148 Nit79A3_1056 Nitrosomonas sp. Is79A3 Ribosomal RNA small subunit methyltransferase I YP_004694318.1 1151831 D 261292 CDS YP_004694319.1 339482533 10933149 1152886..1153923 1 NC_015731.1 TIGRFAM: Dihydroorotase homodimeric type; HAMAP: Dihydroorotase; KEGG: nit:NAL212_2323 dihydroorotase; PFAM: Amidohydrolase 1; Dihydroorotase 1153923 10933149 Nit79A3_1057 Nitrosomonas sp. Is79A3 Dihydroorotase YP_004694319.1 1152886 D 261292 CDS YP_004694320.1 339482534 10933150 complement(1153958..1154326) 1 NC_015731.1 PFAM: thiol-disulphide oxidoreductase DCC; KEGG: nmu:Nmul_A0353 thiol-disulphide oxidoreductase DCC; thiol-disulfide oxidoreductase 1154326 10933150 Nit79A3_1058 Nitrosomonas sp. Is79A3 thiol-disulfide oxidoreductase YP_004694320.1 1153958 R 261292 CDS YP_004694321.1 339482535 10933151 complement(1154398..1154757) 1 NC_015731.1 KEGG: nit:NAL212_2319 hypothetical protein; hypothetical protein 1154757 10933151 Nit79A3_1059 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694321.1 1154398 R 261292 CDS YP_004694322.1 339482536 10933154 complement(1157830..1158204) 1 NC_015731.1 PFAM: Protein of unknown function DUF423; KEGG: nit:NAL212_2721 hypothetical protein; hypothetical protein 1158204 10933154 Nit79A3_1062 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694322.1 1157830 R 261292 CDS YP_004694323.1 339482537 10933155 complement(1158261..1159607) 1 NC_015731.1 TIGRFAM: Exonuclease VII, large subunit; HAMAP: Exodeoxyribonuclease 7 large subunit; KEGG: nit:NAL212_2720 exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; Exodeoxyribonuclease 7 large subunit 1159607 10933155 Nit79A3_1063 Nitrosomonas sp. Is79A3 Exodeoxyribonuclease 7 large subunit YP_004694323.1 1158261 R 261292 CDS YP_004694324.1 339482538 10933156 1159974..1160582 1 NC_015731.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: nit:NAL212_0904 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1160582 10933156 Nit79A3_1064 Nitrosomonas sp. Is79A3 MotA/TolQ/ExbB proton channel YP_004694324.1 1159974 D 261292 CDS YP_004694325.1 339482539 10933157 1161133..1161912 1 NC_015731.1 PFAM: VacJ-like lipoprotein; KEGG: nit:NAL212_0905 VacJ family lipoprotein; VacJ family lipoprotein 1161912 10933157 Nit79A3_1065 Nitrosomonas sp. Is79A3 VacJ family lipoprotein YP_004694325.1 1161133 D 261292 CDS YP_004694326.1 339482540 10933158 1162065..1164074 1 NC_015731.1 KEGG: nit:NAL212_0906 squalene/oxidosqualene cyclase; TIGRFAM: Hopene cyclase; Squalene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene-hopene cyclase 1164074 10933158 Nit79A3_1066 Nitrosomonas sp. Is79A3 squalene-hopene cyclase YP_004694326.1 1162065 D 261292 CDS YP_004694327.1 339482541 10933159 1164020..1164787 1 NC_015731.1 KEGG: nit:NAL212_0907 hopanoid-associated phosphorylase; TIGRFAM: Hopanoid-associated phosphorylase HpnG; PFAM: Nucleoside phosphorylase; hopanoid-associated phosphorylase 1164787 10933159 Nit79A3_1067 Nitrosomonas sp. Is79A3 hopanoid-associated phosphorylase YP_004694327.1 1164020 D 261292 CDS YP_004694328.1 339482542 10933160 complement(1164795..1166558) 1 NC_015731.1 TIGRFAM: ABC transporter, ATP-binding/permease; PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: nit:NAL212_0908 lipid A ABC exporter family, fused ATPase and inner membrane subunits; SMART: ATPase, AAA+ type, core; lipid A ABC exporter family, fused ATPase and inner membrane subunits 1166558 10933160 Nit79A3_1068 Nitrosomonas sp. Is79A3 lipid A ABC exporter family, fused ATPase and inner membrane subunits YP_004694328.1 1164795 R 261292 CDS YP_004694329.1 339482543 10933161 complement(1166784..1167083) 1 NC_015731.1 hypothetical protein 1167083 10933161 Nit79A3_1069 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694329.1 1166784 R 261292 CDS YP_004694330.1 339482544 10933162 1167273..1168109 1 NC_015731.1 KEGG: kko:Kkor_0385 hypothetical protein; hypothetical protein 1168109 10933162 Nit79A3_1070 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694330.1 1167273 D 261292 CDS YP_004694331.1 339482545 10933163 1168175..1169266 1 NC_015731.1 KEGG: kko:Kkor_0386 TPA: chitinase C; ChiC; chitinase 1169266 10933163 Nit79A3_1071 Nitrosomonas sp. Is79A3 chitinase YP_004694331.1 1168175 D 261292 CDS YP_004694332.1 339482546 10933165 complement(1171548..1172462) 1 NC_015731.1 PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: nit:NAL212_2395 peptidyl-prolyl cis-trans isomerase cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 1172462 10933165 Nit79A3_1073 Nitrosomonas sp. Is79A3 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_004694332.1 1171548 R 261292 CDS YP_004694333.1 339482547 10933166 complement(1172568..1173221) 1 NC_015731.1 KEGG: ajs:Ajs_1500 hypothetical protein; hypothetical protein 1173221 10933166 Nit79A3_1074 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694333.1 1172568 R 261292 CDS YP_004694334.1 339482548 10933167 complement(1173467..1174798) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: amt:Amet_1582 hypothetical protein; transposase IS4 family protein 1174798 10933167 Nit79A3_1075 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694334.1 1173467 R 261292 CDS YP_004694335.1 339482549 10933168 1175127..1175450 1 NC_015731.1 PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: nit:NAL212_1383 ferredoxin, C-terminal protein; 4Fe-4S ferredoxin 1175450 10933168 Nit79A3_1076 Nitrosomonas sp. Is79A3 4Fe-4S ferredoxin YP_004694335.1 1175127 D 261292 CDS YP_004694336.1 339482550 10933169 1175479..1178244 1 NC_015731.1 TIGRFAM: DNA repair protein, predicted; KEGG: nit:NAL212_1384 DNA repair protein; DNA repair protein 1178244 10933169 Nit79A3_1077 Nitrosomonas sp. Is79A3 DNA repair protein YP_004694336.1 1175479 D 261292 CDS YP_004694337.1 339482551 10933170 1178237..1181713 1 NC_015731.1 PFAM: DNA helicase, UvrD/REP type; KEGG: nit:NAL212_1385 UvrD/REP helicase; UvrD/REP helicase 1181713 10933170 Nit79A3_1078 Nitrosomonas sp. Is79A3 UvrD/REP helicase YP_004694337.1 1178237 D 261292 CDS YP_004694338.1 339482552 10933171 1182050..1182859 1 NC_015731.1 KEGG: nit:NAL212_2606 methane monooxygenase/ammonia monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; methane monooxygenase/ammonia monooxygenase subunit C 1182859 10933171 Nit79A3_1079 Nitrosomonas sp. Is79A3 methane monooxygenase/ammonia monooxygenase subunit C YP_004694338.1 1182050 D 261292 CDS YP_004694339.1 339482553 10933172 1183040..1183864 1 NC_015731.1 KEGG: nit:NAL212_2605 methane monooxygenase/ammonia monooxygenase, subunit A; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; methane monooxygenase/ammonia monooxygenase subunit A 1183864 10933172 Nit79A3_1080 Nitrosomonas sp. Is79A3 methane monooxygenase/ammonia monooxygenase subunit A YP_004694339.1 1183040 D 261292 CDS YP_004694340.1 339482554 10933173 1183864..1185126 1 NC_015731.1 KEGG: nit:NAL212_2604 methane monooxygenase/ammonia monooxygenase, subunit B; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; methane monooxygenase/ammonia monooxygenase subunit B 1185126 10933173 Nit79A3_1081 Nitrosomonas sp. Is79A3 methane monooxygenase/ammonia monooxygenase subunit B YP_004694340.1 1183864 D 261292 CDS YP_004694341.1 339482555 10933174 1185424..1185804 1 NC_015731.1 KEGG: nde:NIDE2195 thiosulfate sulfurtransferase GlpE; PFAM: Rhodanese-like; SMART: Rhodanese-like; Rhodanese-like protein 1185804 10933174 Nit79A3_1082 Nitrosomonas sp. Is79A3 Rhodanese-like protein YP_004694341.1 1185424 D 261292 CDS YP_004694342.1 339482556 10933175 complement(1185885..1187438) 1 NC_015731.1 PFAM: Amino acid permease-associated region; KEGG: nit:NAL212_1390 amino acid permease-associated region; amino acid permease 1187438 10933175 Nit79A3_1083 Nitrosomonas sp. Is79A3 amino acid permease YP_004694342.1 1185885 R 261292 CDS YP_004694343.1 339482557 10933176 1187828..1189387 1 NC_015731.1 SMART: Serine/threonine-protein kinase domain; KEGG: nit:NAL212_0570 serine/threonine protein kinase; serine/threonine protein kinase 1189387 10933176 Nit79A3_1084 Nitrosomonas sp. Is79A3 serine/threonine protein kinase YP_004694343.1 1187828 D 261292 CDS YP_004694344.1 339482558 10933177 complement(1189453..1190994) 1 NC_015731.1 KEGG: nit:NAL212_0792 peptidase M10A and M12B matrixin and adamalysin; PFAM: Peptidase M10A/M12B, matrixin/adamalysin; SMART: Peptidase, metallopeptidases; peptidase M10A and M12B matrixin and adamalysin 1190994 10933177 Nit79A3_1085 Nitrosomonas sp. Is79A3 peptidase M10A and M12B matrixin and adamalysin YP_004694344.1 1189453 R 261292 CDS YP_004694345.1 339482559 10933178 1191292..1192650 1 NC_015731.1 KEGG: nmu:Nmul_A0618 cytochrome c1 signal peptide protein; hypothetical protein 1192650 10933178 Nit79A3_1086 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694345.1 1191292 D 261292 CDS YP_004694346.1 339482560 10933179 1193068..1193670 1 NC_015731.1 hypothetical protein 1193670 10933179 Nit79A3_1087 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694346.1 1193068 D 261292 CDS YP_004694347.1 339482561 10933180 complement(1193797..1194525) 1 NC_015731.1 TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein phoB; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; KEGG: nit:NAL212_1104 two component transcriptional regulator PhoB, winged helix family; SMART: Signal transduction response regulator, receiver region; two component transcriptional regulator PhoB, winged helix family 1194525 10933180 Nit79A3_1088 Nitrosomonas sp. Is79A3 two component transcriptional regulator PhoB, winged helix family YP_004694347.1 1193797 R 261292 CDS YP_004694348.1 339482562 10933181 complement(1194725..1195171) 1 NC_015731.1 PFAM: Protein of unknown function DUF2495; KEGG: noc:Noc_0432 hypothetical protein; hypothetical protein 1195171 10933181 Nit79A3_1089 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694348.1 1194725 R 261292 CDS YP_004694349.1 339482563 10933182 1195513..1196325 1 NC_015731.1 KEGG: nit:NAL212_2221 hypothetical protein; hypothetical protein 1196325 10933182 Nit79A3_1090 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694349.1 1195513 D 261292 CDS YP_004694350.1 339482564 10933183 1196322..1197806 1 NC_015731.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: nit:NAL212_2220 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1197806 10933183 Nit79A3_1091 Nitrosomonas sp. Is79A3 MotA/TolQ/ExbB proton channel YP_004694350.1 1196322 D 261292 CDS YP_004694351.1 339482565 10933184 1197815..1198426 1 NC_015731.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: nit:NAL212_2219 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1198426 10933184 Nit79A3_1092 Nitrosomonas sp. Is79A3 MotA/TolQ/ExbB proton channel YP_004694351.1 1197815 D 261292 CDS YP_004694352.1 339482566 10933185 1198429..1198833 1 NC_015731.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: nit:NAL212_2218 biopolymer transport protein ExbD/TolR; Biopolymer transport protein ExbD/TolR 1198833 10933185 Nit79A3_1093 Nitrosomonas sp. Is79A3 Biopolymer transport protein ExbD/TolR YP_004694352.1 1198429 D 261292 CDS YP_004694353.1 339482567 10933186 1198839..1199474 1 NC_015731.1 KEGG: nit:NAL212_2217 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein; TonB family protein 1199474 10933186 Nit79A3_1094 Nitrosomonas sp. Is79A3 TonB family protein YP_004694353.1 1198839 D 261292 CDS YP_004694354.1 339482568 10933187 1199510..1200685 1 NC_015731.1 KEGG: nit:NAL212_2216 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; hypothetical protein 1200685 10933187 Nit79A3_1095 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694354.1 1199510 D 261292 CDS YP_004694355.1 339482569 10933188 1201010..1204198 1 NC_015731.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: nit:NAL212_2215 TonB-dependent receptor; TonB-dependent receptor 1204198 10933188 Nit79A3_1096 Nitrosomonas sp. Is79A3 TonB-dependent receptor YP_004694355.1 1201010 D 261292 CDS YP_004694356.1 339482570 10933189 1204438..1204716 1 NC_015731.1 hypothetical protein 1204716 10933189 Nit79A3_1097 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694356.1 1204438 D 261292 CDS YP_004694357.1 339482571 10933190 1204869..1206473 1 NC_015731.1 KEGG: nit:NAL212_2210 hypothetical protein; hypothetical protein 1206473 10933190 Nit79A3_1098 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694357.1 1204869 D 261292 CDS YP_004694358.1 339482572 10933191 1207053..1207310 1 NC_015731.1 KEGG: nit:NAL212_2208 hypothetical protein; hypothetical protein 1207310 10933191 Nit79A3_1099 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694358.1 1207053 D 261292 CDS YP_004694359.1 339482573 10933192 complement(1207311..1207523) 1 NC_015731.1 hypothetical protein 1207523 10933192 Nit79A3_1100 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694359.1 1207311 R 261292 CDS YP_004694360.1 339482574 10933193 1207579..1208631 1 NC_015731.1 KEGG: nit:NAL212_2207 phosphate ABC transporter, periplasmic phosphate-binding protein; TIGRFAM: Periplasmic phosphate binding protein; PFAM: Bacterial extracellular solute-binding, family 1; phosphate ABC transporter substrate-binding protein 1208631 10933193 Nit79A3_1101 Nitrosomonas sp. Is79A3 phosphate ABC transporter substrate-binding protein YP_004694360.1 1207579 D 261292 CDS YP_004694361.1 339482575 10933194 1208750..1209712 1 NC_015731.1 KEGG: nit:NAL212_2206 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: Phosphate ABC transporter, permease PstC; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 1209712 10933194 Nit79A3_1102 Nitrosomonas sp. Is79A3 phosphate ABC transporter permease YP_004694361.1 1208750 D 261292 CDS YP_004694362.1 339482576 10933195 1209722..1210567 1 NC_015731.1 KEGG: nit:NAL212_2205 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease 2; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 1210567 10933195 Nit79A3_1103 Nitrosomonas sp. Is79A3 phosphate ABC transporter permease YP_004694362.1 1209722 D 261292 CDS YP_004694363.1 339482577 10933196 1210643..1211515 1 NC_015731.1 TIGRFAM: Phosphate transport system permease 1; PFAM: ABC transporter-like; KEGG: nit:NAL212_2204 phosphate ABC transporter, ATPase subunit; SMART: ATPase, AAA+ type, core; phosphate ABC transporter ATPase 1211515 10933196 Nit79A3_1104 Nitrosomonas sp. Is79A3 phosphate ABC transporter ATPase YP_004694363.1 1210643 D 261292 CDS YP_004694364.1 339482578 10933197 complement(1212092..1212187) 1 NC_015731.1 hypothetical protein 1212187 10933197 Nit79A3_1105 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694364.1 1212092 R 261292 CDS YP_004694365.1 339482579 10933198 1212640..1213764 1 NC_015731.1 KEGG: fra:Francci3_2923 transmembrane protein; transmembrane protein 1213764 10933198 Nit79A3_1106 Nitrosomonas sp. Is79A3 transmembrane protein YP_004694365.1 1212640 D 261292 CDS YP_004694366.1 339482580 10933199 1214149..1214439 1 NC_015731.1 KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein 1214439 10933199 Nit79A3_1107 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694366.1 1214149 D 261292 CDS YP_004694367.1 339482581 10933200 1214430..1214777 1 NC_015731.1 KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein 1214777 10933200 Nit79A3_1108 Nitrosomonas sp. Is79A3 IS66 Orf2 family protein YP_004694367.1 1214430 D 261292 CDS YP_004694368.1 339482582 10933204 complement(1217346..1218596) 1 NC_015731.1 KEGG: pin:Ping_3152 hypothetical protein; hypothetical protein 1218596 10933204 Nit79A3_1112 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694368.1 1217346 R 261292 CDS YP_004694369.1 339482583 10933205 complement(1218619..1219476) 1 NC_015731.1 hypothetical protein 1219476 10933205 Nit79A3_1113 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694369.1 1218619 R 261292 CDS YP_004694370.1 339482584 10933206 complement(1219466..1220110) 1 NC_015731.1 KEGG: rcu:RCOM_0136370 hypothetical protein; hypothetical protein 1220110 10933206 Nit79A3_1114 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694370.1 1219466 R 261292 CDS YP_004694371.1 339482585 10933208 complement(1220654..1221631) 1 NC_015731.1 KEGG: neu:NE0744 hypothetical protein; hypothetical protein 1221631 10933208 Nit79A3_1116 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694371.1 1220654 R 261292 CDS YP_004694372.1 339482586 10933210 complement(1221862..1222014) 1 NC_015731.1 KEGG: nit:NAL212_0312 PhoH family protein; PhoH family protein 1222014 10933210 Nit79A3_1118 Nitrosomonas sp. Is79A3 PhoH family protein YP_004694372.1 1221862 R 261292 CDS YP_004694373.1 339482587 10933211 1222589..1224109 1 NC_015731.1 PFAM: CHAD; KEGG: ttu:TERTU_3714 CHAD domain containing protein; CHAD domain containing protein 1224109 10933211 Nit79A3_1119 Nitrosomonas sp. Is79A3 CHAD domain containing protein YP_004694373.1 1222589 D 261292 CDS YP_004694374.1 339482588 10933212 1224106..1224858 1 NC_015731.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: ttu:TERTU_3713 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase 1224858 10933212 Nit79A3_1120 Nitrosomonas sp. Is79A3 Cobyrinic acid ac-diamide synthase YP_004694374.1 1224106 D 261292 CDS YP_004694375.1 339482589 10933213 1225323..1225739 1 NC_015731.1 PFAM: NUDIX hydrolase domain; KEGG: dps:DP1250 hypothetical protein; NUDIX hydrolase 1225739 10933213 Nit79A3_1121 Nitrosomonas sp. Is79A3 NUDIX hydrolase YP_004694375.1 1225323 D 261292 CDS YP_004694376.1 339482590 10933214 complement(1225990..1226853) 1 NC_015731.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: cro:ROD_26331 prophage DNA adenine methylase; D12 class N6 adenine-specific DNA methyltransferase 1226853 10933214 Nit79A3_1122 Nitrosomonas sp. Is79A3 D12 class N6 adenine-specific DNA methyltransferase YP_004694376.1 1225990 R 261292 CDS YP_004694377.1 339482591 10933216 1227252..1229126 1 NC_015731.1 PFAM: Pyruvate kinase, barrel; KEGG: tau:Tola_1286 pyruvate kinase; Pyruvate kinase barrel 1229126 10933216 Nit79A3_1124 Nitrosomonas sp. Is79A3 Pyruvate kinase barrel YP_004694377.1 1227252 D 261292 CDS YP_004694378.1 339482592 10933217 1229431..1230861 1 NC_015731.1 KEGG: npu:Npun_R1137 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1230861 10933217 Nit79A3_1125 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004694378.1 1229431 D 261292 CDS YP_004694379.1 339482593 10933218 complement(1231016..1231426) 1 NC_015731.1 KEGG: tbd:Tbd_0366 hypothetical protein; hypothetical protein 1231426 10933218 Nit79A3_1126 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694379.1 1231016 R 261292 CDS YP_004694380.1 339482594 10933219 1231654..1233534 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Cystathionine beta-synthase, core; Diguanylate cyclase, predicted; KEGG: mms:mma_1158 hypothetical protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; diguanylate cyclase/phosphodiesterase with CBS domains 1233534 10933219 Nit79A3_1127 Nitrosomonas sp. Is79A3 diguanylate cyclase/phosphodiesterase with CBS domains YP_004694380.1 1231654 D 261292 CDS YP_004694381.1 339482595 10933220 complement(1233602..1234150) 1 NC_015731.1 KEGG: nmu:Nmul_A2093 inorganic diphosphatase; HAMAP: Inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; Inorganic pyrophosphatase 1234150 10933220 Nit79A3_1128 Nitrosomonas sp. Is79A3 Inorganic pyrophosphatase YP_004694381.1 1233602 R 261292 CDS YP_004694382.1 339482596 10933221 complement(1234345..1236108) 1 NC_015731.1 TIGRFAM: ATPase, anion-transporting; PFAM: ATPase, anion-transporting; KEGG: nit:NAL212_0386 arsenite-activated ATPase ArsA; SMART: ATPase, AAA+ type, core; arsenite-activated ATPase ArsA 1236108 10933221 Nit79A3_1129 Nitrosomonas sp. Is79A3 arsenite-activated ATPase ArsA YP_004694382.1 1234345 R 261292 CDS YP_004694383.1 339482597 10933222 complement(1236123..1236473) 1 NC_015731.1 PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: nit:NAL212_0387 arsenical resistance operon trans-acting repressor ArsD; Arsenical resistance operon trans-acting repressor ArsD 1236473 10933222 Nit79A3_1130 Nitrosomonas sp. Is79A3 Arsenical resistance operon trans-acting repressor ArsD YP_004694383.1 1236123 R 261292 CDS YP_004694384.1 339482598 10933223 complement(1236612..1236935) 1 NC_015731.1 KEGG: nit:NAL212_0084 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 1236935 10933223 Nit79A3_1131 Nitrosomonas sp. Is79A3 regulatory protein ArsR YP_004694384.1 1236612 R 261292 CDS YP_004694385.1 339482599 10933224 complement(1237167..1237742) 1 NC_015731.1 KEGG: noc:Noc_0534 hypothetical protein; hypothetical protein 1237742 10933224 Nit79A3_1132 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694385.1 1237167 R 261292 CDS YP_004694386.1 339482600 10933225 complement(1238459..1239367) 1 NC_015731.1 KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 1239367 10933225 Nit79A3_1134 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004694386.1 1238459 R 261292 CDS YP_004694387.1 339482601 10933226 complement(1239364..1239687) 1 NC_015731.1 KEGG: net:Neut_2500 transposase IS3/IS911; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein 1239687 10933226 Nit79A3_1135 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004694387.1 1239364 R 261292 CDS YP_004694388.1 339482602 10933227 1240603..1243098 1 NC_015731.1 KEGG: nit:NAL212_2623 peptidase S16 lon domain-containing protein; peptidase S16 lon domain-containing protein 1243098 10933227 Nit79A3_1136 Nitrosomonas sp. Is79A3 peptidase S16 lon domain-containing protein YP_004694388.1 1240603 D 261292 CDS YP_004694389.1 339482603 10933228 complement(1243259..1244242) 1 NC_015731.1 PFAM: Multicopper oxidase, type 2; KEGG: nit:NAL212_2853 multicopper oxidase type 2; multicopper oxidase type 2 1244242 10933228 Nit79A3_1137 Nitrosomonas sp. Is79A3 multicopper oxidase type 2 YP_004694389.1 1243259 R 261292 CDS YP_004694390.1 339482604 10933229 complement(1244242..1245951) 1 NC_015731.1 PFAM: Multicopper oxidase, type 3; KEGG: nit:NAL212_2852 multicopper oxidase type 3; multicopper oxidase type 3 1245951 10933229 Nit79A3_1138 Nitrosomonas sp. Is79A3 multicopper oxidase type 3 YP_004694390.1 1244242 R 261292 CDS YP_004694391.1 339482605 10933230 1246268..1247482 1 NC_015731.1 KEGG: nit:NAL212_2850 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1247482 10933230 Nit79A3_1139 Nitrosomonas sp. Is79A3 RND family efflux transporter MFP subunit YP_004694391.1 1246268 D 261292 CDS YP_004694392.1 339482606 10933231 1247498..1250653 1 NC_015731.1 KEGG: nit:NAL212_2849 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 1250653 10933231 Nit79A3_1140 Nitrosomonas sp. Is79A3 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004694392.1 1247498 D 261292 CDS YP_004694393.1 339482607 10933232 1250716..1252413 1 NC_015731.1 PFAM: 3-dehydroquinate synthase AroB; Shikimate kinase; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; HAMAP: Shikimate kinase; KEGG: nit:NAL212_2835 shikimate kinase; Shikimate kinase 1252413 10933232 Nit79A3_1141 Nitrosomonas sp. Is79A3 Shikimate kinase YP_004694393.1 1250716 D 261292 CDS YP_004694394.1 339482608 10933233 1252406..1253527 1 NC_015731.1 SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; KEGG: nit:NAL212_2834 deoxyguanosinetriphosphate triphosphohydrolase; HAMAP: Deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Deoxyguanosinetriphosphate triphosphohydrolase-like protein 1253527 10933233 Nit79A3_1142 Nitrosomonas sp. Is79A3 Deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_004694394.1 1252406 D 261292 CDS YP_004694395.1 339482609 10933234 1253702..1254775 1 NC_015731.1 TIGRFAM: Uroporphyrinogen decarboxylase HemE; HAMAP: Uroporphyrinogen decarboxylase HemE; KEGG: nit:NAL212_2832 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 1254775 10933234 Nit79A3_1143 Nitrosomonas sp. Is79A3 uroporphyrinogen decarboxylase YP_004694395.1 1253702 D 261292 CDS YP_004694396.1 339482610 10933235 1254821..1255516 1 NC_015731.1 KEGG: nit:NAL212_2831 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator 1255516 10933235 Nit79A3_1144 Nitrosomonas sp. Is79A3 winged helix family two component transcriptional regulator YP_004694396.1 1254821 D 261292 CDS YP_004694397.1 339482611 10933236 1255491..1256780 1 NC_015731.1 KEGG: nit:NAL212_2830 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 1256780 10933236 Nit79A3_1145 Nitrosomonas sp. Is79A3 integral membrane sensor signal transduction histidine kinase YP_004694397.1 1255491 D 261292 CDS YP_004694398.1 339482612 10933237 1257017..1257976 1 NC_015731.1 PFAM: Protein of unknown function DUF897; KEGG: nit:NAL212_2829 hypothetical protein; hypothetical protein 1257976 10933237 Nit79A3_1146 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694398.1 1257017 D 261292 CDS YP_004694399.1 339482613 10933238 1258020..1258337 1 NC_015731.1 KEGG: nit:NAL212_2828 hypothetical protein; hypothetical protein 1258337 10933238 Nit79A3_1147 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694399.1 1258020 D 261292 CDS YP_004694400.1 339482614 10933239 1258723..1259517 1 NC_015731.1 KEGG: nit:NAL212_2827 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 1259517 10933239 Nit79A3_1148 Nitrosomonas sp. Is79A3 phospholipid/glycerol acyltransferase YP_004694400.1 1258723 D 261292 CDS YP_004694401.1 339482615 10933240 complement(1259468..1260271) 1 NC_015731.1 TIGRFAM: Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); HAMAP: Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; KEGG: nit:NAL212_2826 bis(5'-nucleosyl)-tetraphosphatase, symmetrical; PFAM: Metallophosphoesterase; Bis(5'-nucleosyl)-tetraphosphatase, symmetrical 1260271 10933240 Nit79A3_1149 Nitrosomonas sp. Is79A3 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical YP_004694401.1 1259468 R 261292 CDS YP_004694402.1 339482616 10933241 complement(1260318..1261124) 1 NC_015731.1 TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; HAMAP: Dihydrodipicolinate reductase; KEGG: nit:NAL212_2825 dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase; Dihydrodipicolinate reductase 1261124 10933241 Nit79A3_1150 Nitrosomonas sp. Is79A3 Dihydrodipicolinate reductase YP_004694402.1 1260318 R 261292 CDS YP_004694403.1 339482617 10933242 complement(1261167..1261580) 1 NC_015731.1 PFAM: SmpA/OmlA; KEGG: nit:NAL212_2824 SmpA/OmlA domain-containing protein; SmpA/OmlA domain-containing protein 1261580 10933242 Nit79A3_1151 Nitrosomonas sp. Is79A3 SmpA/OmlA domain-containing protein YP_004694403.1 1261167 R 261292 CDS YP_004694404.1 339482618 10933243 1261658..1262098 1 NC_015731.1 PFAM: Ferric-uptake regulator; KEGG: nit:NAL212_2823 ferric uptake regulator, Fur family; Fur family ferric uptake regulator 1262098 10933243 Nit79A3_1152 Nitrosomonas sp. Is79A3 Fur family ferric uptake regulator YP_004694404.1 1261658 D 261292 CDS YP_004694405.1 339482619 10933244 1262058..1263374 1 NC_015731.1 KEGG: nit:NAL212_2822 lytic murein transglycosylase; TIGRFAM: Lytic murein transglycosylase; PFAM: Peptidoglycan binding-like; lytic murein transglycosylase 1263374 10933244 Nit79A3_1153 Nitrosomonas sp. Is79A3 lytic murein transglycosylase YP_004694405.1 1262058 D 261292 CDS YP_004694406.1 339482620 10933245 complement(1263411..1264397) 1 NC_015731.1 TIGRFAM: Malate dehydrogenase, NAD/NADP; HAMAP: Malate dehydrogenase; KEGG: nit:NAL212_2821 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase; malate dehydrogenase 1264397 10933245 Nit79A3_1154 Nitrosomonas sp. Is79A3 malate dehydrogenase YP_004694406.1 1263411 R 261292 CDS YP_004694407.1 339482621 10933246 complement(1264822..1267308) 1 NC_015731.1 KEGG: net:Neut_2269 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; P-type HAD superfamily ATPase 1267308 10933246 Nit79A3_1155 Nitrosomonas sp. Is79A3 P-type HAD superfamily ATPase YP_004694407.1 1264822 R 261292 CDS YP_004694408.1 339482622 10933247 1267586..1267972 1 NC_015731.1 KEGG: nmu:Nmul_A1142 hypothetical protein; hypothetical protein 1267972 10933247 Nit79A3_1156 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694408.1 1267586 D 261292 CDS YP_004694409.1 339482623 10933248 complement(1268322..1268495) 1 NC_015731.1 KEGG: nmu:Nmul_A1142 hypothetical protein; hypothetical protein 1268495 10933248 Nit79A3_1157 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694409.1 1268322 R 261292 CDS YP_004694410.1 339482624 10933249 complement(1268946..1270157) 1 NC_015731.1 PFAM: ATPase, AFG1-like; KEGG: nit:NAL212_1253 AFG1-family ATPase; AFG1-family ATPase 1270157 10933249 Nit79A3_1158 Nitrosomonas sp. Is79A3 AFG1-family ATPase YP_004694410.1 1268946 R 261292 CDS YP_004694411.1 339482625 10933250 complement(1270164..1271540) 1 NC_015731.1 PFAM: Major facilitator superfamily MFS-1; KEGG: nit:NAL212_1254 major facilitator superfamily MFS_1; major facilitator superfamily protein 1271540 10933250 Nit79A3_1159 Nitrosomonas sp. Is79A3 major facilitator superfamily protein YP_004694411.1 1270164 R 261292 CDS YP_004694412.1 339482626 10933251 complement(1271537..1272310) 1 NC_015731.1 KEGG: nit:NAL212_1255 exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III 1272310 10933251 Nit79A3_1160 Nitrosomonas sp. Is79A3 exodeoxyribonuclease III YP_004694412.1 1271537 R 261292 CDS YP_004694413.1 339482627 10933252 1272337..1272978 1 NC_015731.1 TIGRFAM: Orotate phosphoribosyl transferase; HAMAP: Orotate phosphoribosyltransferase; KEGG: nit:NAL212_1256 orotate phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; Orotate phosphoribosyltransferase 1272978 10933252 Nit79A3_1161 Nitrosomonas sp. Is79A3 Orotate phosphoribosyltransferase YP_004694413.1 1272337 D 261292 CDS YP_004694414.1 339482628 10933253 complement(1273106..1273879) 1 NC_015731.1 KEGG: nit:NAL212_0590 hypothetical protein; hypothetical protein 1273879 10933253 Nit79A3_1162 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694414.1 1273106 R 261292 CDS YP_004694415.1 339482629 10933254 complement(1274223..1274822) 1 NC_015731.1 PFAM: Protein of unknown function DUF882, bacterial; KEGG: nit:NAL212_1269 hypothetical protein; hypothetical protein 1274822 10933254 Nit79A3_1163 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694415.1 1274223 R 261292 CDS YP_004694416.1 339482630 10933255 complement(1274873..1276507) 1 NC_015731.1 PFAM: YkuD domain; Peptidoglycan binding-like; KEGG: nit:NAL212_1270 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 1276507 10933255 Nit79A3_1164 Nitrosomonas sp. Is79A3 ErfK/YbiS/YcfS/YnhG family protein YP_004694416.1 1274873 R 261292 CDS YP_004694417.1 339482631 10933256 1276745..1278049 1 NC_015731.1 PFAM: Peptidase M18, aminopeptidase I; KEGG: neu:NE1533 aminopeptidase 2; peptidase M18 aminopeptidase I 1278049 10933256 Nit79A3_1165 Nitrosomonas sp. Is79A3 peptidase M18 aminopeptidase I YP_004694417.1 1276745 D 261292 CDS YP_004694418.1 339482632 10933257 complement(1278120..1279088) 1 NC_015731.1 KEGG: fjo:Fjoh_3586 hypothetical protein; hypothetical protein 1279088 10933257 Nit79A3_1166 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694418.1 1278120 R 261292 CDS YP_004694419.1 339482633 10933258 1279235..1280539 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 1280539 10933258 Nit79A3_1167 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694419.1 1279235 D 261292 CDS YP_004694420.1 339482634 10933259 complement(1281234..1287272) 1 NC_015731.1 PFAM: Haemolysin-type calcium-binding region; KEGG: nit:NAL212_1700 hypothetical protein; Hemolysin-type calcium-binding protein 1287272 10933259 Nit79A3_1168 Nitrosomonas sp. Is79A3 Hemolysin-type calcium-binding protein YP_004694420.1 1281234 R 261292 CDS YP_004694421.1 339482635 10933260 complement(1287515..1288480) 1 NC_015731.1 KEGG: nit:NAL212_1699 Sel1 domain-containing protein repeat-containing protein; PFAM: Sel1-like; SMART: Sel1-like; Sel1 domain-containing protein 1288480 10933260 Nit79A3_1169 Nitrosomonas sp. Is79A3 Sel1 domain-containing protein YP_004694421.1 1287515 R 261292 CDS YP_004694422.1 339482636 10933261 complement(1288587..1289423) 1 NC_015731.1 PFAM: Phage Tail Collar; KEGG: nit:NAL212_1698 tail collar domain-containing protein; Tail Collar domain-containing protein 1289423 10933261 Nit79A3_1170 Nitrosomonas sp. Is79A3 Tail Collar domain-containing protein YP_004694422.1 1288587 R 261292 CDS YP_004694423.1 339482637 10933262 1289551..1290780 1 NC_015731.1 KEGG: nit:NAL212_1697 hypothetical protein; hypothetical protein 1290780 10933262 Nit79A3_1171 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694423.1 1289551 D 261292 CDS YP_004694424.1 339482638 10933263 1290777..1292330 1 NC_015731.1 PFAM: GTP-binding protein, HSR1-related; KEGG: nit:NAL212_1696 GTP-binding protein HSR1-like protein; GTP-binding protein HSR1-like protein 1292330 10933263 Nit79A3_1172 Nitrosomonas sp. Is79A3 GTP-binding protein HSR1-like protein YP_004694424.1 1290777 D 261292 CDS YP_004694425.1 339482639 10933264 1292404..1293165 1 NC_015731.1 KEGG: nit:NAL212_1694 hypothetical protein; hypothetical protein 1293165 10933264 Nit79A3_1173 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694425.1 1292404 D 261292 CDS YP_004694426.1 339482640 10933265 1293282..1294295 1 NC_015731.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: nit:NAL212_1693 extracellular solute-binding protein family 1; ABC transporter substrate-binding protein 1294295 10933265 Nit79A3_1174 Nitrosomonas sp. Is79A3 ABC transporter substrate-binding protein YP_004694426.1 1293282 D 261292 CDS YP_004694427.1 339482641 10933266 1294400..1296001 1 NC_015731.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: nit:NAL212_1692 ABC-type transporter, integral membrane subunit; ABC transporter permease 1296001 10933266 Nit79A3_1175 Nitrosomonas sp. Is79A3 ABC transporter permease YP_004694427.1 1294400 D 261292 CDS YP_004694428.1 339482642 10933267 1296006..1297061 1 NC_015731.1 KEGG: nit:NAL212_1691 Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; Transport-associated OB, type 2; SMART: ATPase, AAA+ type, core; ABC transporter 1297061 10933267 Nit79A3_1176 Nitrosomonas sp. Is79A3 ABC transporter YP_004694428.1 1296006 D 261292 CDS YP_004694429.1 339482643 10933268 1297287..1297613 1 NC_015731.1 KEGG: nit:NAL212_1690 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin 1297613 10933268 Nit79A3_1177 Nitrosomonas sp. Is79A3 thioredoxin YP_004694429.1 1297287 D 261292 CDS YP_004694430.1 339482644 10933269 1297761..1299020 1 NC_015731.1 TIGRFAM: Transcription termination factor Rho; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; KEGG: nit:NAL212_1689 transcription termination factor Rho; SMART: Cold shock protein; ATPase, AAA+ type, core; transcription termination factor Rho 1299020 10933269 Nit79A3_1178 Nitrosomonas sp. Is79A3 transcription termination factor Rho YP_004694430.1 1297761 D 261292 CDS YP_004694431.1 339482645 10933270 1299260..1299472 1 NC_015731.1 TIGRFAM: Ribosomal protein L31; HAMAP: 50S ribosomal protein L31; KEGG: nmu:Nmul_A2086 50S ribosomal protein L31; PFAM: Ribosomal protein L31; 50S ribosomal protein L31 1299472 10933270 Nit79A3_1179 Nitrosomonas sp. Is79A3 50S ribosomal protein L31 YP_004694431.1 1299260 D 261292 CDS YP_004694432.1 339482646 10933271 complement(1299589..1299909) 1 NC_015731.1 PFAM: Cupin 2, conserved barrel; KEGG: nit:NAL212_1299 cupin 2 barrel domain-containing protein; cupin 1299909 10933271 Nit79A3_1180 Nitrosomonas sp. Is79A3 cupin YP_004694432.1 1299589 R 261292 CDS YP_004694433.1 339482647 10933272 complement(1299955..1300959) 1 NC_015731.1 PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; KEGG: nit:NAL212_1252 mannitol dehydrogenase; molecular chaperone GroES 1300959 10933272 Nit79A3_1181 Nitrosomonas sp. Is79A3 molecular chaperone GroES YP_004694433.1 1299955 R 261292 CDS YP_004694434.1 339482648 10933273 complement(1301870..1302778) 1 NC_015731.1 KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 1302778 10933273 Nit79A3_1183 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004694434.1 1301870 R 261292 CDS YP_004694435.1 339482649 10933274 complement(1302775..1303098) 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein 1303098 10933274 Nit79A3_1184 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004694435.1 1302775 R 261292 CDS YP_004694436.1 339482650 10933275 1303828..1304640 1 NC_015731.1 KEGG: nit:NAL212_1301 polysaccharide export protein EpsE; TIGRFAM: Polysaccharide export EpsE; PFAM: Polysaccharide export protein; Soluble ligand binding domain; polysaccharide export protein EpsE 1304640 10933275 Nit79A3_1185 Nitrosomonas sp. Is79A3 polysaccharide export protein EpsE YP_004694436.1 1303828 D 261292 CDS YP_004694437.1 339482651 10933276 1304720..1306087 1 NC_015731.1 KEGG: nit:NAL212_1302 chain length determinant protein EpsF; TIGRFAM: Chain length determinant protein EpsF; PFAM: Lipopolysaccharide biosynthesis; chain length determinant protein EpsF 1306087 10933276 Nit79A3_1186 Nitrosomonas sp. Is79A3 chain length determinant protein EpsF YP_004694437.1 1304720 D 261292 CDS YP_004694438.1 339482652 10933277 1306122..1307024 1 NC_015731.1 TIGRFAM: Tyrosine-protein kinase, chain length determinant protein EpsG; Exopolysaccharide synthesis protein; KEGG: nit:NAL212_1303 chain length determinant protein tyrosine kinase EpsG; chain length determinant protein tyrosine kinase EpsG 1307024 10933277 Nit79A3_1187 Nitrosomonas sp. Is79A3 chain length determinant protein tyrosine kinase EpsG YP_004694438.1 1306122 D 261292 CDS YP_004694439.1 339482653 10933278 1307047..1307940 1 NC_015731.1 KEGG: nit:NAL212_1304 exosortase 2; TIGRFAM: Exosortase 2; Exosortase, EpsH; PFAM: Exosortase EpsH-related; exosortase 1307940 10933278 Nit79A3_1188 Nitrosomonas sp. Is79A3 exosortase YP_004694439.1 1307047 D 261292 CDS YP_004694440.1 339482654 10933279 1308078..1308764 1 NC_015731.1 TIGRFAM: Methanolan biosynthesis EpsI; KEGG: nit:NAL212_1306 EpsI family protein; EpsI family protein 1308764 10933279 Nit79A3_1189 Nitrosomonas sp. Is79A3 EpsI family protein YP_004694440.1 1308078 D 261292 CDS YP_004694441.1 339482655 10933280 1308924..1309553 1 NC_015731.1 PFAM: Methyltransferase type 11; KEGG: nph:NP1930A sugar metabolism cluster protein (quinone/porphyrin-methyltransferase); type 11 methyltransferase 1309553 10933280 Nit79A3_1190 Nitrosomonas sp. Is79A3 type 11 methyltransferase YP_004694441.1 1308924 D 261292 CDS YP_004694442.1 339482656 10933281 1309736..1311289 1 NC_015731.1 KEGG: nit:NAL212_1307 hypothetical protein; hypothetical protein 1311289 10933281 Nit79A3_1191 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694442.1 1309736 D 261292 CDS YP_004694443.1 339482657 10933282 1311406..1312143 1 NC_015731.1 hypothetical protein 1312143 10933282 Nit79A3_1192 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694443.1 1311406 D 261292 CDS YP_004694444.1 339482658 10933283 1312407..1313279 1 NC_015731.1 PFAM: Sulfotransferase; KEGG: nit:NAL212_1309 sulfotransferase; sulfotransferase 1313279 10933283 Nit79A3_1193 Nitrosomonas sp. Is79A3 sulfotransferase YP_004694444.1 1312407 D 261292 CDS YP_004694445.1 339482659 10933284 1313290..1314057 1 NC_015731.1 PFAM: Polysaccharide deacetylase; KEGG: bmr:BMI_I326 polysaccharide deacetylase; polysaccharide deacetylase 1314057 10933284 Nit79A3_1194 Nitrosomonas sp. Is79A3 polysaccharide deacetylase YP_004694445.1 1313290 D 261292 CDS YP_004694446.1 339482660 10933285 1314204..1315121 1 NC_015731.1 PFAM: Sulfotransferase; KEGG: sun:SUN_1532 sulfotransferase; sulfotransferase 1315121 10933285 Nit79A3_1195 Nitrosomonas sp. Is79A3 sulfotransferase YP_004694446.1 1314204 D 261292 CDS YP_004694447.1 339482661 10933287 complement(1315712..1316848) 1 NC_015731.1 KEGG: cph:Cpha266_2339 transposase, IS4 family protein; manually curated; PFAM: Transposase, IS4-like; transposase IS4 family protein 1316848 10933287 Nit79A3_1197 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694447.1 1315712 R 261292 CDS YP_004694448.1 339482662 10933288 1317071..1317739 1 NC_015731.1 PFAM: Methyltransferase type 11; KEGG: nhl:Nhal_3317 hypothetical protein; type 11 methyltransferase 1317739 10933288 Nit79A3_1198 Nitrosomonas sp. Is79A3 type 11 methyltransferase YP_004694448.1 1317071 D 261292 CDS YP_004694449.1 339482663 10933289 1317861..1319165 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 1319165 10933289 Nit79A3_1199 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694449.1 1317861 D 261292 CDS YP_004694450.1 339482664 10933290 1319417..1321054 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: afe:Lferr_1749 hypothetical protein; transposase IS4 family protein 1321054 10933290 Nit79A3_1200 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694450.1 1319417 D 261292 CDS YP_004694451.1 339482665 10933294 1323015..1323305 1 NC_015731.1 KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein 1323305 10933294 Nit79A3_1204 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694451.1 1323015 D 261292 CDS YP_004694452.1 339482666 10933295 1323296..1323643 1 NC_015731.1 KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein 1323643 10933295 Nit79A3_1205 Nitrosomonas sp. Is79A3 IS66 Orf2 family protein YP_004694452.1 1323296 D 261292 CDS YP_004694453.1 339482667 10933296 1323693..1325276 1 NC_015731.1 KEGG: nit:NAL212_0062 transposase IS66; manually curated; PFAM: Transposase, IS66; transposase IS66 1325276 10933296 Nit79A3_1206 Nitrosomonas sp. Is79A3 transposase IS66 YP_004694453.1 1323693 D 261292 CDS YP_004694454.1 339482668 10933297 1325415..1325918 1 NC_015731.1 KEGG: afe:Lferr_0146 hypothetical protein; hypothetical protein 1325918 10933297 Nit79A3_1207 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694454.1 1325415 D 261292 CDS YP_004694455.1 339482669 10933298 1325891..1326475 1 NC_015731.1 KEGG: afe:Lferr_0145 transposase; hypothetical protein 1326475 10933298 Nit79A3_1208 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694455.1 1325891 D 261292 CDS YP_004694456.1 339482670 10933299 complement(1326456..1326623) 1 NC_015731.1 KEGG: nit:NAL212_3145 IS5 family transposase; IS5 family transposase 1326623 10933299 Nit79A3_1209 Nitrosomonas sp. Is79A3 IS5 family transposase YP_004694456.1 1326456 R 261292 CDS YP_004694457.1 339482671 10933300 1326838..1327197 1 NC_015731.1 PFAM: Transposase IS200-like; KEGG: eba:ebA563 transposition helper protein; transposase IS200-family protein 1327197 10933300 Nit79A3_1210 Nitrosomonas sp. Is79A3 transposase IS200-family protein YP_004694457.1 1326838 D 261292 CDS YP_004694458.1 339482672 10933301 complement(1327484..1328650) 1 NC_015731.1 KEGG: nit:NAL212_2625 hypothetical protein; hypothetical protein 1328650 10933301 Nit79A3_1211 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694458.1 1327484 R 261292 CDS YP_004694459.1 339482673 10933303 complement(1330051..1330371) 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: nit:NAL212_0153 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1330371 10933303 Nit79A3_1213 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004694459.1 1330051 R 261292 CDS YP_004694460.1 339482674 10933305 complement(1331044..1331859) 1 NC_015731.1 manually curated; TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; KEGG: nit:NAL212_1317 glycosyl transferase, WecB/TagA/CpsF family; PFAM: Glycosyl transferase WecB/TagA/CpsF; glycosyl transferase, WecB/TagA/CpsF family 1331859 10933305 Nit79A3_1215 Nitrosomonas sp. Is79A3 glycosyl transferase, WecB/TagA/CpsF family YP_004694460.1 1331044 R 261292 CDS YP_004694461.1 339482675 10933306 complement(1332279..1333799) 1 NC_015731.1 KEGG: tbd:Tbd_1785 hypothetical protein; hypothetical protein 1333799 10933306 Nit79A3_1216 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694461.1 1332279 R 261292 CDS YP_004694462.1 339482676 10933307 complement(1333796..1335010) 1 NC_015731.1 PFAM: Glycosyl transferase, group 1; KEGG: nit:NAL212_1313 glycosyl transferase group 1; group 1 glycosyl transferase 1335010 10933307 Nit79A3_1217 Nitrosomonas sp. Is79A3 group 1 glycosyl transferase YP_004694462.1 1333796 R 261292 CDS YP_004694463.1 339482677 10933310 complement(1337556..1337687) 1 NC_015731.1 hypothetical protein 1337687 10933310 Nit79A3_1220 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694463.1 1337556 R 261292 CDS YP_004694464.1 339482678 10933311 1338157..1342269 1 NC_015731.1 KEGG: lch:Lcho_0632 Na-Ca exchanger/integrin-beta4; PFAM: Ig; ASPIC/UnbV; Haemolysin-type calcium-binding region; SMART: Dystroglycan-type cadherin-like; Ig family protein 1342269 10933311 Nit79A3_1221 Nitrosomonas sp. Is79A3 Ig family protein YP_004694464.1 1338157 D 261292 CDS YP_004694465.1 339482679 10933312 1342844..1343935 1 NC_015731.1 TIGRFAM: Glycine cleavage system T protein; HAMAP: Aminomethyltransferase; KEGG: nit:NAL212_1914 aminomethyltransferase; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; glycine cleavage system protein T 1343935 10933312 Nit79A3_1222 Nitrosomonas sp. Is79A3 glycine cleavage system protein T YP_004694465.1 1342844 D 261292 CDS YP_004694466.1 339482680 10933313 1343978..1344367 1 NC_015731.1 TIGRFAM: Glycine cleavage H-protein, subgroup; HAMAP: Glycine cleavage H-protein; KEGG: nit:NAL212_1913 glycine cleavage system H protein; PFAM: Glycine cleavage H-protein; Glycine cleavage system H protein 1344367 10933313 Nit79A3_1223 Nitrosomonas sp. Is79A3 Glycine cleavage system H protein YP_004694466.1 1343978 D 261292 CDS YP_004694467.1 339482681 10933314 1344443..1345795 1 NC_015731.1 KEGG: nit:NAL212_1912 glycine dehydrogenase (decarboxylating); HAMAP: glycine dehydrogenase [decarboxylating] subunit 1; PFAM: Glycine cleavage system P-protein, N-terminal; glycine dehydrogenase (decarboxylating) subunit 1 1345795 10933314 Nit79A3_1224 Nitrosomonas sp. Is79A3 glycine dehydrogenase (decarboxylating) subunit 1 YP_004694467.1 1344443 D 261292 CDS YP_004694468.1 339482682 10933315 1345833..1346327 1 NC_015731.1 KEGG: nit:NAL212_1911 redoxin domain-containing protein; HAMAP: thiol peroxidase; PFAM: Redoxin; thiol peroxidase 1346327 10933315 Nit79A3_1225 Nitrosomonas sp. Is79A3 thiol peroxidase YP_004694468.1 1345833 D 261292 CDS YP_004694469.1 339482683 10933316 1346350..1347801 1 NC_015731.1 KEGG: nit:NAL212_1910 glycine cleavage system P-protein; HAMAP: glycine dehydrogenase [decarboxylating] subunit 2; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase; glycine dehydrogenase (decarboxylating) subunit 2 1347801 10933316 Nit79A3_1226 Nitrosomonas sp. Is79A3 glycine dehydrogenase (decarboxylating) subunit 2 YP_004694469.1 1346350 D 261292 CDS YP_004694470.1 339482684 10933317 1347925..1348860 1 NC_015731.1 PFAM: Carbohydrate/purine kinase; KEGG: nit:NAL212_1909 adenosine kinase; PfkB domain-containing protein 1348860 10933317 Nit79A3_1227 Nitrosomonas sp. Is79A3 PfkB domain-containing protein YP_004694470.1 1347925 D 261292 CDS YP_004694471.1 339482685 10933318 complement(1348967..1349500) 1 NC_015731.1 KEGG: ctt:CtCNB1_2565 probable mannitol operon repressor; hypothetical protein 1349500 10933318 Nit79A3_1228 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694471.1 1348967 R 261292 CDS YP_004694472.1 339482686 10933319 complement(1349602..1350450) 1 NC_015731.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: nit:NAL212_0961 endonuclease/exonuclease/phosphatase; hypothetical protein 1350450 10933319 Nit79A3_1229 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694472.1 1349602 R 261292 CDS YP_004694473.1 339482687 10933320 1350723..1351148 1 NC_015731.1 KEGG: nit:NAL212_2279 hypothetical protein; hypothetical protein 1351148 10933320 Nit79A3_1230 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694473.1 1350723 D 261292 CDS YP_004694474.1 339482688 10933321 1351165..1351713 1 NC_015731.1 KEGG: nit:NAL212_2278 hypothetical protein; hypothetical protein 1351713 10933321 Nit79A3_1231 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694474.1 1351165 D 261292 CDS YP_004694475.1 339482689 10933322 complement(1351788..1352342) 1 NC_015731.1 KEGG: nit:NAL212_2819 hypothetical protein; hypothetical protein 1352342 10933322 Nit79A3_1232 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694475.1 1351788 R 261292 CDS YP_004694476.1 339482690 10933323 complement(1352459..1353268) 1 NC_015731.1 KEGG: nit:NAL212_2606 methane monooxygenase/ammonia monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; methane monooxygenase/ammonia monooxygenase subunit C 1353268 10933323 Nit79A3_1233 Nitrosomonas sp. Is79A3 methane monooxygenase/ammonia monooxygenase subunit C YP_004694476.1 1352459 R 261292 CDS YP_004694477.1 339482691 10933324 complement(1353540..1354214) 1 NC_015731.1 KEGG: nit:NAL212_2815 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 1354214 10933324 Nit79A3_1234 Nitrosomonas sp. Is79A3 LuxR family transcriptional regulator YP_004694477.1 1353540 R 261292 CDS YP_004694478.1 339482692 10933325 complement(1354224..1356131) 1 NC_015731.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; PAS fold-4; KEGG: nit:NAL212_2814 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; PAS/PAC sensor signal transduction histidine kinase 1356131 10933325 Nit79A3_1235 Nitrosomonas sp. Is79A3 PAS/PAC sensor signal transduction histidine kinase YP_004694478.1 1354224 R 261292 CDS YP_004694479.1 339482693 10933326 complement(1356288..1358684) 1 NC_015731.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-3; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; KEGG: nhl:Nhal_2031 PAS sensor protein; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; Signal transduction response regulator, receiver region; PAS/PAC sensor hybrid histidine kinase 1358684 10933326 Nit79A3_1236 Nitrosomonas sp. Is79A3 PAS/PAC sensor hybrid histidine kinase YP_004694479.1 1356288 R 261292 CDS YP_004694480.1 339482694 10933327 complement(1358793..1359455) 1 NC_015731.1 KEGG: nit:NAL212_2280 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 1359455 10933327 Nit79A3_1237 Nitrosomonas sp. Is79A3 LuxR family transcriptional regulator YP_004694480.1 1358793 R 261292 CDS YP_004694481.1 339482695 10933328 complement(1359452..1361326) 1 NC_015731.1 TIGRFAM: PAS; PFAM: PAS fold-3; PAS fold; ATP-binding region, ATPase-like; KEGG: meh:M301_1662 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAS; PAC motif; multi-sensor signal transduction histidine kinase 1361326 10933328 Nit79A3_1238 Nitrosomonas sp. Is79A3 multi-sensor signal transduction histidine kinase YP_004694481.1 1359452 R 261292 CDS YP_004694482.1 339482696 10933329 complement(1361485..1361700) 1 NC_015731.1 hypothetical protein 1361700 10933329 Nit79A3_1239 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694482.1 1361485 R 261292 CDS YP_004694483.1 339482697 10933330 1361703..1362665 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 1362665 10933330 Nit79A3_1240 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694483.1 1361703 D 261292 CDS YP_004694484.1 339482698 10933331 1363214..1363945 1 NC_015731.1 SMART: HTH transcriptional regulator, Crp; KEGG: bxe:Bxe_C0542 Crp/FNR family transcriptional regulator; Crp/Fnr family transcriptional regulator 1363945 10933331 Nit79A3_1241 Nitrosomonas sp. Is79A3 Crp/Fnr family transcriptional regulator YP_004694484.1 1363214 D 261292 CDS YP_004694485.1 339482699 10933333 complement(1365940..1366848) 1 NC_015731.1 KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 1366848 10933333 Nit79A3_1243 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004694485.1 1365940 R 261292 CDS YP_004694486.1 339482700 10933334 complement(1366845..1367168) 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein 1367168 10933334 Nit79A3_1244 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004694486.1 1366845 R 261292 CDS YP_004694487.1 339482701 10933335 complement(1367222..1367422) 1 NC_015731.1 KEGG: nit:NAL212_1594 hypothetical protein; hypothetical protein 1367422 10933335 Nit79A3_1245 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694487.1 1367222 R 261292 CDS YP_004694488.1 339482702 10933336 complement(1367576..1368178) 1 NC_015731.1 KEGG: nit:NAL212_1593 hypothetical protein; hypothetical protein 1368178 10933336 Nit79A3_1246 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694488.1 1367576 R 261292 CDS YP_004694489.1 339482703 10933337 complement(1368574..1368960) 1 NC_015731.1 KEGG: nit:NAL212_1949 hypothetical protein; hypothetical protein 1368960 10933337 Nit79A3_1247 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694489.1 1368574 R 261292 CDS YP_004694490.1 339482704 10933338 1369402..1369797 1 NC_015731.1 KEGG: pna:Pnap_0133 DNA polymerase beta subunit; DNA polymerase subunit beta 1369797 10933338 Nit79A3_1248 Nitrosomonas sp. Is79A3 DNA polymerase subunit beta YP_004694490.1 1369402 D 261292 CDS YP_004694491.1 339482705 10933339 1369831..1370217 1 NC_015731.1 PFAM: Protein of unknown function DUF86; KEGG: pna:Pnap_0134 hypothetical protein; hypothetical protein 1370217 10933339 Nit79A3_1249 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694491.1 1369831 D 261292 CDS YP_004694492.1 339482706 10933340 complement(1370471..1371334) 1 NC_015731.1 KEGG: nwa:Nwat_2452 hypothetical protein; hypothetical protein 1371334 10933340 Nit79A3_1250 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694492.1 1370471 R 261292 CDS YP_004694493.1 339482707 10933342 complement(1372535..1374862) 1 NC_015731.1 KEGG: nit:NAL212_0869 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor A 1374862 10933342 Nit79A3_1252 Nitrosomonas sp. Is79A3 von Willebrand factor A YP_004694493.1 1372535 R 261292 CDS YP_004694494.1 339482708 10933343 complement(1374920..1375726) 1 NC_015731.1 KEGG: nit:NAL212_0870 nitric oxide reductase NorQ protein; nitric oxide reductase NorQ protein 1375726 10933343 Nit79A3_1253 Nitrosomonas sp. Is79A3 nitric oxide reductase NorQ protein YP_004694494.1 1374920 R 261292 CDS YP_004694495.1 339482709 10933344 complement(1375834..1376190) 1 NC_015731.1 PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: nit:NAL212_0871 ribulose-bisphosphate carboxylase; ribulose bisphosphate carboxylase small chain 1376190 10933344 Nit79A3_1254 Nitrosomonas sp. Is79A3 ribulose bisphosphate carboxylase small chain YP_004694495.1 1375834 R 261292 CDS YP_004694496.1 339482710 10933345 complement(1376270..1377691) 1 NC_015731.1 KEGG: nit:NAL212_0872 ribulose-bisphosphate carboxylase; HAMAP: Ribulose bisphosphate carboxylase large chain; PFAM: Ribulose bisphosphate carboxylase, large subunit, C-terminal; Ribulose bisphosphate carboxylase, large subunit, N-terminal; Ribulose bisphosphate carboxylase large chain 1377691 10933345 Nit79A3_1255 Nitrosomonas sp. Is79A3 Ribulose bisphosphate carboxylase large chain YP_004694496.1 1376270 R 261292 CDS YP_004694497.1 339482711 10933346 1377883..1378797 1 NC_015731.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nit:NAL212_0873 transcriptional regulator, LysR family; LysR family transcriptional regulator 1378797 10933346 Nit79A3_1256 Nitrosomonas sp. Is79A3 LysR family transcriptional regulator YP_004694497.1 1377883 D 261292 CDS YP_004694498.1 339482712 10933347 1378927..1379625 1 NC_015731.1 KEGG: nit:NAL212_0874 hypothetical protein; hypothetical protein 1379625 10933347 Nit79A3_1257 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694498.1 1378927 D 261292 CDS YP_004694499.1 339482713 10933348 1379657..1379884 1 NC_015731.1 KEGG: nit:NAL212_0875 hypothetical protein; hypothetical protein 1379884 10933348 Nit79A3_1258 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694499.1 1379657 D 261292 CDS YP_004694500.1 339482714 10933349 1380192..1381520 1 NC_015731.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; KEGG: nit:NAL212_0876 MiaB-like tRNA modifying enzyme YliG; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; PFAM: Methylthiotransferase, N-terminal; Radical SAM; 30S ribosomal protein S12 methylthiotransferase 1381520 10933349 Nit79A3_1259 Nitrosomonas sp. Is79A3 30S ribosomal protein S12 methylthiotransferase YP_004694500.1 1380192 D 261292 CDS YP_004694501.1 339482715 10933350 complement(1381737..1382357) 1 NC_015731.1 KEGG: nit:NAL212_2318 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1382357 10933350 Nit79A3_1260 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004694501.1 1381737 R 261292 CDS YP_004694502.1 339482716 10933351 complement(1382540..1383502) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 1383502 10933351 Nit79A3_1261 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694502.1 1382540 R 261292 CDS YP_004694503.1 339482717 10933352 complement(1384006..1384467) 1 NC_015731.1 KEGG: sdn:Sden_2935 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase 1384467 10933352 Nit79A3_1262 Nitrosomonas sp. Is79A3 isoprenylcysteine carboxyl methyltransferase YP_004694503.1 1384006 R 261292 CDS YP_004694504.1 339482718 10933353 complement(1384481..1384876) 1 NC_015731.1 KEGG: nit:NAL212_1684 lysophosphatidic acid receptor 2-like protein; lysophosphatidic acid receptor 2-like protein 1384876 10933353 Nit79A3_1263 Nitrosomonas sp. Is79A3 lysophosphatidic acid receptor 2-like protein YP_004694504.1 1384481 R 261292 CDS YP_004694505.1 339482719 10933354 complement(1384891..1386315) 1 NC_015731.1 KEGG: nit:NAL212_0795 Na+/H+ antiporter NhaC; TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like; Na+/H+ antiporter NhaC 1386315 10933354 Nit79A3_1264 Nitrosomonas sp. Is79A3 Na+/H+ antiporter NhaC YP_004694505.1 1384891 R 261292 CDS YP_004694506.1 339482720 10933356 1386834..1387985 1 NC_015731.1 PFAM: (Uracil-5)-methyltransferase; KEGG: nit:NAL212_0793 (uracil-5)-methyltransferase; (uracil-5)-methyltransferase 1387985 10933356 Nit79A3_1266 Nitrosomonas sp. Is79A3 (uracil-5)-methyltransferase YP_004694506.1 1386834 D 261292 CDS YP_004694507.1 339482721 10933357 1388214..1388828 1 NC_015731.1 TIGRFAM: ABC transporter, haem export, CcmA; PFAM: ABC transporter-like; KEGG: nit:NAL212_1557 heme exporter protein CcmA; SMART: ATPase, AAA+ type, core; heme exporter protein CcmA 1388828 10933357 Nit79A3_1267 Nitrosomonas sp. Is79A3 heme exporter protein CcmA YP_004694507.1 1388214 D 261292 CDS YP_004694508.1 339482722 10933358 1388830..1389489 1 NC_015731.1 KEGG: nit:NAL212_1558 heme exporter protein CcmB; TIGRFAM: Cytochrome c-type biogenesis protein CcmB; PFAM: Cytochrome c-type biogenesis protein CcmB; heme exporter protein CcmB 1389489 10933358 Nit79A3_1268 Nitrosomonas sp. Is79A3 heme exporter protein CcmB YP_004694508.1 1388830 D 261292 CDS YP_004694509.1 339482723 10933359 1389711..1390454 1 NC_015731.1 KEGG: nit:NAL212_1559 heme exporter protein CcmC; TIGRFAM: Cytochrome c-type biogenesis protein CcmC; PFAM: Cytochrome c assembly protein; heme exporter protein CcmC 1390454 10933359 Nit79A3_1269 Nitrosomonas sp. Is79A3 heme exporter protein CcmC YP_004694509.1 1389711 D 261292 CDS YP_004694510.1 339482724 10933360 1390454..1390651 1 NC_015731.1 TIGRFAM: Haem exporter protein D (CcmD); KEGG: nit:NAL212_1560 heme exporter protein CcmD; heme exporter protein CcmD 1390651 10933360 Nit79A3_1270 Nitrosomonas sp. Is79A3 heme exporter protein CcmD YP_004694510.1 1390454 D 261292 CDS YP_004694511.1 339482725 10933361 1390635..1391084 1 NC_015731.1 KEGG: nit:NAL212_1561 CcmE/CycJ protein; HAMAP: CcmE/CycJ protein; PFAM: CcmE/CycJ protein; Cytochrome c-type biogenesis protein ccmE 1391084 10933361 Nit79A3_1271 Nitrosomonas sp. Is79A3 Cytochrome c-type biogenesis protein ccmE YP_004694511.1 1390635 D 261292 CDS YP_004694512.1 339482726 10933362 1391168..1393222 1 NC_015731.1 KEGG: nit:NAL212_1562 cytochrome c-type biogenesis protein CcmF; TIGRFAM: Cytochrome c-type biogenesis protein CcmF; PFAM: Cytochrome c assembly protein; cytochrome c-type biogenesis protein CcmF 1393222 10933362 Nit79A3_1272 Nitrosomonas sp. Is79A3 cytochrome c-type biogenesis protein CcmF YP_004694512.1 1391168 D 261292 CDS YP_004694513.1 339482727 10933363 1393219..1393749 1 NC_015731.1 KEGG: nit:NAL212_1563 periplasmic protein thiol/disulfide oxidoreductase DsbE; TIGRFAM: Periplasmic protein thiol:disulphide oxidoreductase DsbE; PFAM: Redoxin; periplasmic protein thiol/disulfide oxidoreductase DsbE 1393749 10933363 Nit79A3_1273 Nitrosomonas sp. Is79A3 periplasmic protein thiol/disulfide oxidoreductase DsbE YP_004694513.1 1393219 D 261292 CDS YP_004694514.1 339482728 10933364 1393764..1394294 1 NC_015731.1 PFAM: Cytochrome C biogenesis protein CcmH; KEGG: nit:NAL212_1564 cytochrome c biogenesis protein; cytochrome C biogenesis protein 1394294 10933364 Nit79A3_1274 Nitrosomonas sp. Is79A3 cytochrome C biogenesis protein YP_004694514.1 1393764 D 261292 CDS YP_004694515.1 339482729 10933365 1394291..1395625 1 NC_015731.1 TIGRFAM: Cytochrome c-type biogenesis protein CcmI; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: nit:NAL212_1565 cytochrome c-type biogenesis protein CcmI; SMART: Tetratricopeptide repeat; cytochrome c-type biogenesis protein CcmI 1395625 10933365 Nit79A3_1275 Nitrosomonas sp. Is79A3 cytochrome c-type biogenesis protein CcmI YP_004694515.1 1394291 D 261292 CDS YP_004694516.1 339482730 10933366 1395631..1396092 1 NC_015731.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: nit:NAL212_1566 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 1396092 10933366 Nit79A3_1276 Nitrosomonas sp. Is79A3 alkyl hydroperoxide reductase YP_004694516.1 1395631 D 261292 CDS YP_004694517.1 339482731 10933368 1397304..1397624 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: nit:NAL212_0153 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1397624 10933368 Nit79A3_1278 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004694517.1 1397304 D 261292 CDS YP_004694518.1 339482732 10933371 1399492..1399995 1 NC_015731.1 KEGG: afe:Lferr_0146 hypothetical protein; hypothetical protein 1399995 10933371 Nit79A3_1281 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694518.1 1399492 D 261292 CDS YP_004694519.1 339482733 10933372 1399968..1400552 1 NC_015731.1 KEGG: afe:Lferr_0145 transposase; hypothetical protein 1400552 10933372 Nit79A3_1282 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694519.1 1399968 D 261292 CDS YP_004694520.1 339482734 10933374 1402210..1403247 1 NC_015731.1 KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase 1403247 10933374 Nit79A3_1284 Nitrosomonas sp. Is79A3 isxo7 transposase YP_004694520.1 1402210 D 261292 CDS YP_004694521.1 339482735 10933375 1403526..1404689 1 NC_015731.1 KEGG: nit:NAL212_1232 two component transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; LuxR family transcriptional regulator 1404689 10933375 Nit79A3_1285 Nitrosomonas sp. Is79A3 LuxR family transcriptional regulator YP_004694521.1 1403526 D 261292 CDS YP_004694522.1 339482736 10933377 complement(1405888..1407351) 1 NC_015731.1 KEGG: nit:NAL212_1362 dynamin family protein; dynamin family protein 1407351 10933377 Nit79A3_1287 Nitrosomonas sp. Is79A3 dynamin family protein YP_004694522.1 1405888 R 261292 CDS YP_004694523.1 339482737 10933378 1407805..1408518 1 NC_015731.1 PFAM: Protein of unknown function DUF502; KEGG: eba:ebA5013 hypothetical protein; hypothetical protein 1408518 10933378 Nit79A3_1288 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694523.1 1407805 D 261292 CDS YP_004694524.1 339482738 10933379 complement(1408553..1409590) 1 NC_015731.1 KEGG: nit:NAL212_1364 folate-binding protein YgfZ; TIGRFAM: Folate-binding, YgfZ; PFAM: Glycine cleavage T-protein, N-terminal; folate-binding protein YgfZ 1409590 10933379 Nit79A3_1289 Nitrosomonas sp. Is79A3 folate-binding protein YgfZ YP_004694524.1 1408553 R 261292 CDS YP_004694525.1 339482739 10933380 1409757..1410191 1 NC_015731.1 KEGG: nit:NAL212_1365 hypothetical protein; hypothetical protein 1410191 10933380 Nit79A3_1290 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694525.1 1409757 D 261292 CDS YP_004694526.1 339482740 10933381 1410379..1410657 1 NC_015731.1 hypothetical protein 1410657 10933381 Nit79A3_1291 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694526.1 1410379 D 261292 CDS YP_004694527.1 339482741 10933383 1411833..1414424 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: dar:Daro_1362 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1414424 10933383 Nit79A3_1293 Nitrosomonas sp. Is79A3 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004694527.1 1411833 D 261292 CDS YP_004694528.1 339482742 10933384 complement(1414641..1416032) 1 NC_015731.1 KEGG: nmu:Nmul_A2728 phosphatase-like; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; Protein of unknown function DUF839, bacterial; PEP motif anchor domain-containing protein 1416032 10933384 Nit79A3_1294 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004694528.1 1414641 R 261292 CDS YP_004694529.1 339482743 10933385 1416413..1416862 1 NC_015731.1 KEGG: nit:NAL212_1366 hypothetical protein; hypothetical protein 1416862 10933385 Nit79A3_1295 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694529.1 1416413 D 261292 CDS YP_004694530.1 339482744 10933386 1416966..1418084 1 NC_015731.1 PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; KEGG: amd:AMED_5743 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 1418084 10933386 Nit79A3_1296 Nitrosomonas sp. Is79A3 acyl-CoA dehydrogenase YP_004694530.1 1416966 D 261292 CDS YP_004694531.1 339482745 10933387 1418096..1418950 1 NC_015731.1 KEGG: cai:Caci_0551 hypothetical protein; hypothetical protein 1418950 10933387 Nit79A3_1297 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694531.1 1418096 D 261292 CDS YP_004694532.1 339482746 10933388 1418962..1420146 1 NC_015731.1 KEGG: dac:Daci_4508 hypothetical protein; hypothetical protein 1420146 10933388 Nit79A3_1298 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694532.1 1418962 D 261292 CDS YP_004694533.1 339482747 10933389 complement(1420227..1420589) 1 NC_015731.1 KEGG: nit:NAL212_1367 hypothetical protein; hypothetical protein 1420589 10933389 Nit79A3_1299 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694533.1 1420227 R 261292 CDS YP_004694534.1 339482748 10933390 complement(1420650..1421174) 1 NC_015731.1 KEGG: nit:NAL212_1368 hypothetical protein; hypothetical protein 1421174 10933390 Nit79A3_1300 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694534.1 1420650 R 261292 CDS YP_004694535.1 339482749 10933391 complement(1421634..1422176) 1 NC_015731.1 KEGG: nit:NAL212_2278 hypothetical protein; hypothetical protein 1422176 10933391 Nit79A3_1301 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694535.1 1421634 R 261292 CDS YP_004694536.1 339482750 10933392 complement(1422192..1422713) 1 NC_015731.1 KEGG: nit:NAL212_2279 hypothetical protein; hypothetical protein 1422713 10933392 Nit79A3_1302 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694536.1 1422192 R 261292 CDS YP_004694537.1 339482751 10933393 1423049..1423918 1 NC_015731.1 PFAM: Phosphoribulokinase/uridine kinase; KEGG: nit:NAL212_1369 phosphoribulokinase; phosphoribulokinase/uridine kinase 1423918 10933393 Nit79A3_1303 Nitrosomonas sp. Is79A3 phosphoribulokinase/uridine kinase YP_004694537.1 1423049 D 261292 CDS YP_004694538.1 339482752 10933394 1424068..1426269 1 NC_015731.1 PFAM: DNA helicase, UvrD/REP type; KEGG: nit:NAL212_1370 UvrD/REP helicase; UvrD/REP helicase 1426269 10933394 Nit79A3_1304 Nitrosomonas sp. Is79A3 UvrD/REP helicase YP_004694538.1 1424068 D 261292 CDS YP_004694539.1 339482753 10933395 complement(1426483..1428414) 1 NC_015731.1 KEGG: gme:Gmet_0833 alpha amylase, catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; alpha amylase 1428414 10933395 Nit79A3_1305 Nitrosomonas sp. Is79A3 alpha amylase YP_004694539.1 1426483 R 261292 CDS YP_004694540.1 339482754 10933396 complement(1428601..1429302) 1 NC_015731.1 PFAM: Ribonuclease T2; KEGG: mca:MCA1293 ribonuclease T2 family protein; ribonuclease T2 1429302 10933396 Nit79A3_1306 Nitrosomonas sp. Is79A3 ribonuclease T2 YP_004694540.1 1428601 R 261292 CDS YP_004694541.1 339482755 10933397 complement(1429506..1430774) 1 NC_015731.1 KEGG: sdn:Sden_2175 hypothetical protein; hypothetical protein 1430774 10933397 Nit79A3_1307 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694541.1 1429506 R 261292 CDS YP_004694542.1 339482756 10933398 complement(1430884..1431798) 1 NC_015731.1 KEGG: app:CAP2UW1_2764 peptidase C1A papain; PFAM: Peptidase C1A, papain C-terminal; SMART: Peptidase C1A, papain C-terminal; peptidase C1A papain 1431798 10933398 Nit79A3_1308 Nitrosomonas sp. Is79A3 peptidase C1A papain YP_004694542.1 1430884 R 261292 CDS YP_004694543.1 339482757 10933399 complement(1432005..1432325) 1 NC_015731.1 KEGG: nit:NAL212_1538 hypothetical protein; hypothetical protein 1432325 10933399 Nit79A3_1309 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694543.1 1432005 R 261292 CDS YP_004694544.1 339482758 10933400 complement(1432612..1433595) 1 NC_015731.1 KEGG: nit:NAL212_1089 hypothetical protein; hypothetical protein 1433595 10933400 Nit79A3_1310 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694544.1 1432612 R 261292 CDS YP_004694545.1 339482759 10933401 complement(1433640..1434590) 1 NC_015731.1 TIGRFAM: Homoserine kinase ThrB; HAMAP: Homoserine kinase; KEGG: nit:NAL212_1090 homoserine kinase; PFAM: Aminoglycoside phosphotransferase; Homoserine kinase 1434590 10933401 Nit79A3_1311 Nitrosomonas sp. Is79A3 Homoserine kinase YP_004694545.1 1433640 R 261292 CDS YP_004694546.1 339482760 10933402 complement(1434674..1435075) 1 NC_015731.1 KEGG: nit:NAL212_1091 hypothetical protein; hypothetical protein 1435075 10933402 Nit79A3_1312 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694546.1 1434674 R 261292 CDS YP_004694547.1 339482761 10933403 complement(1435133..1435852) 1 NC_015731.1 KEGG: nit:NAL212_1092 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00730; PFAM: Conserved hypothetical protein CHP00730; hypothetical protein 1435852 10933403 Nit79A3_1313 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694547.1 1435133 R 261292 CDS YP_004694548.1 339482762 10933404 1435868..1438615 1 NC_015731.1 TIGRFAM: DNA polymerase 1; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: nit:NAL212_1093 DNA polymerase I; SMART: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; DNA polymerase I 1438615 10933404 Nit79A3_1314 Nitrosomonas sp. Is79A3 DNA polymerase I YP_004694548.1 1435868 D 261292 CDS YP_004694549.1 339482763 10933405 complement(1438653..1441196) 1 NC_015731.1 KEGG: nit:NAL212_1094 ribonuclease, Rne/Rng family; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain; ribonuclease, Rne/Rng family 1441196 10933405 Nit79A3_1315 Nitrosomonas sp. Is79A3 ribonuclease, Rne/Rng family YP_004694549.1 1438653 R 261292 CDS YP_004694550.1 339482764 10933406 1441674..1442687 1 NC_015731.1 TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: nit:NAL212_1095 pseudouridine synthase, RluA family; SMART: RNA-binding S4; pseudouridine synthase 1442687 10933406 Nit79A3_1316 Nitrosomonas sp. Is79A3 pseudouridine synthase YP_004694550.1 1441674 D 261292 CDS YP_004694551.1 339482765 10933407 complement(1442734..1443378) 1 NC_015731.1 KEGG: nit:NAL212_1096 arylesterase; manually curated; PFAM: Lipase, GDSL; G-D-S-L family lipolytic protein 1443378 10933407 Nit79A3_1317 Nitrosomonas sp. Is79A3 G-D-S-L family lipolytic protein YP_004694551.1 1442734 R 261292 CDS YP_004694552.1 339482766 10933408 1443377..1444063 1 NC_015731.1 KEGG: nit:NAL212_1097 phosphonate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 1444063 10933408 Nit79A3_1318 Nitrosomonas sp. Is79A3 ABC transporter YP_004694552.1 1443377 D 261292 CDS YP_004694553.1 339482767 10933409 1444131..1446629 1 NC_015731.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: nit:NAL212_1098 hypothetical protein; hypothetical protein 1446629 10933409 Nit79A3_1319 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694553.1 1444131 D 261292 CDS YP_004694554.1 339482768 10933410 1446648..1447859 1 NC_015731.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; KEGG: nit:NAL212_1099 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 1447859 10933410 Nit79A3_1320 Nitrosomonas sp. Is79A3 oxygen-independent coproporphyrinogen III oxidase YP_004694554.1 1446648 D 261292 CDS YP_004694555.1 339482769 10933411 1447941..1448735 1 NC_015731.1 PFAM: Formate/nitrite transporter; KEGG: nit:NAL212_1100 formate/nitrite transporter; formate/nitrite transporter 1448735 10933411 Nit79A3_1321 Nitrosomonas sp. Is79A3 formate/nitrite transporter YP_004694555.1 1447941 D 261292 CDS YP_004694556.1 339482770 10933412 1448872..1450842 1 NC_015731.1 PFAM: ATP-binding region, ATPase-like; KEGG: rpe:RPE_2484 ATPase domain-containing protein; ATPase 1450842 10933412 Nit79A3_1322 Nitrosomonas sp. Is79A3 ATPase YP_004694556.1 1448872 D 261292 CDS YP_004694557.1 339482771 10933413 1450902..1451483 1 NC_015731.1 KEGG: rpe:RPE_2484 ATPase domain-containing protein; hypothetical protein 1451483 10933413 Nit79A3_1323 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694557.1 1450902 D 261292 CDS YP_004694558.1 339482772 10933414 complement(1451916..1452854) 1 NC_015731.1 KEGG: nit:NAL212_3082 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1452854 10933414 Nit79A3_1324 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004694558.1 1451916 R 261292 CDS YP_004694559.1 339482773 10933415 complement(1452878..1453021) 1 NC_015731.1 hypothetical protein 1453021 10933415 Nit79A3_1325 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694559.1 1452878 R 261292 CDS YP_004694560.1 339482774 10933416 1453503..1454324 1 NC_015731.1 KEGG: bja:blr0248 hypothetical protein; hypothetical protein 1454324 10933416 Nit79A3_1326 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694560.1 1453503 D 261292 CDS YP_004694561.1 339482775 10933417 1454321..1455982 1 NC_015731.1 PFAM: Amidohydrolase 1; KEGG: fri:FraEuI1c_6392 amidohydrolase; amidohydrolase 1455982 10933417 Nit79A3_1327 Nitrosomonas sp. Is79A3 amidohydrolase YP_004694561.1 1454321 D 261292 CDS YP_004694562.1 339482776 10933418 1456231..1456656 1 NC_015731.1 KEGG: nit:NAL212_1102 hypothetical protein; hypothetical protein 1456656 10933418 Nit79A3_1328 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694562.1 1456231 D 261292 CDS YP_004694563.1 339482777 10933419 1456821..1458131 1 NC_015731.1 KEGG: sus:Acid_1970 hypothetical protein; hypothetical protein 1458131 10933419 Nit79A3_1329 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694563.1 1456821 D 261292 CDS YP_004694564.1 339482778 10933420 complement(1458377..1458769) 1 NC_015731.1 KEGG: nit:NAL212_2699 hypothetical protein; hypothetical protein 1458769 10933420 Nit79A3_1330 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694564.1 1458377 R 261292 CDS YP_004694565.1 339482779 10933421 complement(1459142..1459312) 1 NC_015731.1 hypothetical protein 1459312 10933421 Nit79A3_1331 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694565.1 1459142 R 261292 CDS YP_004694566.1 339482780 10933422 complement(1459717..1460382) 1 NC_015731.1 hypothetical protein 1460382 10933422 Nit79A3_1332 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694566.1 1459717 R 261292 CDS YP_004694567.1 339482781 10933423 1460923..1461546 1 NC_015731.1 KEGG: nit:NAL212_1903 hypothetical protein; hypothetical protein 1461546 10933423 Nit79A3_1333 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694567.1 1460923 D 261292 CDS YP_004694568.1 339482782 10933424 1461648..1462499 1 NC_015731.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: bba:Bd1031 phospholipase/carboxylesterase; alpha/beta hydrolase 1462499 10933424 Nit79A3_1334 Nitrosomonas sp. Is79A3 alpha/beta hydrolase YP_004694568.1 1461648 D 261292 CDS YP_004694569.1 339482783 10933425 complement(1462526..1464502) 1 NC_015731.1 KEGG: nde:NIDE4188 hypothetical protein; hypothetical protein 1464502 10933425 Nit79A3_1335 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694569.1 1462526 R 261292 CDS YP_004694570.1 339482784 10933426 complement(1464516..1465028) 1 NC_015731.1 KEGG: lic:LIC12227 hypothetical protein; hypothetical protein 1465028 10933426 Nit79A3_1336 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694570.1 1464516 R 261292 CDS YP_004694571.1 339482785 10933427 complement(1465306..1466265) 1 NC_015731.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: nit:NAL212_1704 alpha/beta hydrolase fold protein; alpha/beta hydrolase 1466265 10933427 Nit79A3_1337 Nitrosomonas sp. Is79A3 alpha/beta hydrolase YP_004694571.1 1465306 R 261292 CDS YP_004694572.1 339482786 10933428 complement(1466265..1466666) 1 NC_015731.1 KEGG: nit:NAL212_1705 hypothetical protein; hypothetical protein 1466666 10933428 Nit79A3_1338 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694572.1 1466265 R 261292 CDS YP_004694573.1 339482787 10933429 complement(1466794..1468041) 1 NC_015731.1 KEGG: cts:Ctha_1456 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 1468041 10933429 Nit79A3_1339 Nitrosomonas sp. Is79A3 metal dependent phosphohydrolase YP_004694573.1 1466794 R 261292 CDS YP_004694574.1 339482788 10933430 1468611..1468898 1 NC_015731.1 KEGG: nit:NAL212_2324 hypothetical protein; hypothetical protein 1468898 10933430 Nit79A3_1340 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694574.1 1468611 D 261292 CDS YP_004694575.1 339482789 10933431 complement(1469018..1469764) 1 NC_015731.1 KEGG: nit:NAL212_2637 hypothetical protein; hypothetical protein 1469764 10933431 Nit79A3_1341 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694575.1 1469018 R 261292 CDS YP_004694576.1 339482790 10933433 complement(1470216..1471043) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein 1471043 10933433 Nit79A3_1343 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694576.1 1470216 R 261292 CDS YP_004694577.1 339482791 10933434 1471176..1471499 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein 1471499 10933434 Nit79A3_1344 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004694577.1 1471176 D 261292 CDS YP_004694578.1 339482792 10933435 1471496..1472404 1 NC_015731.1 KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 1472404 10933435 Nit79A3_1345 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004694578.1 1471496 D 261292 CDS YP_004694579.1 339482793 10933436 complement(1472372..1472500) 1 NC_015731.1 hypothetical protein 1472500 10933436 Nit79A3_1346 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694579.1 1472372 R 261292 CDS YP_004694580.1 339482794 10933437 complement(1472743..1475673) 1 NC_015731.1 TIGRFAM: Aconitase/iron regulatory protein 2; KEGG: nit:NAL212_2041 aconitate hydratase 1; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel; aconitate hydratase 1 1475673 10933437 Nit79A3_1347 Nitrosomonas sp. Is79A3 aconitate hydratase 1 YP_004694580.1 1472743 R 261292 CDS YP_004694581.1 339482795 10933441 complement(1476479..1477963) 1 NC_015731.1 KEGG: nit:NAL212_1473 hypothetical protein; hypothetical protein 1477963 10933441 Nit79A3_1348 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694581.1 1476479 R 261292 CDS YP_004694582.1 339482796 10933442 complement(1478217..1478972) 1 NC_015731.1 KEGG: nit:NAL212_0495 spermine synthase; spermine synthase 1478972 10933442 Nit79A3_1349 Nitrosomonas sp. Is79A3 spermine synthase YP_004694582.1 1478217 R 261292 CDS YP_004694583.1 339482797 10933443 complement(1478969..1479214) 1 NC_015731.1 KEGG: tmz:Tmz1t_2249 NADH ubiquinone oxidoreductase 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 1479214 10933443 Nit79A3_1350 Nitrosomonas sp. Is79A3 NADH ubiquinone oxidoreductase 20 kDa subunit YP_004694583.1 1478969 R 261292 CDS YP_004694584.1 339482798 10933444 complement(1479204..1479935) 1 NC_015731.1 PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; KEGG: mca:MCA2725 NAD-reducing hydrogenase, gamma subunit; NADH:ubiquinone oxidoreductase subunit G, iron-sulfur binding protein 1479935 10933444 Nit79A3_1351 Nitrosomonas sp. Is79A3 NADH:ubiquinone oxidoreductase subunit G, iron-sulfur binding protein YP_004694584.1 1479204 R 261292 CDS YP_004694585.1 339482799 10933445 complement(1479935..1481701) 1 NC_015731.1 KEGG: gca:Galf_1581 respiratory-chain NADH dehydrogenase domain 51 kDa subunit; manually curated; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit 1481701 10933445 Nit79A3_1352 Nitrosomonas sp. Is79A3 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit YP_004694585.1 1479935 R 261292 CDS YP_004694586.1 339482800 10933446 1481963..1482655 1 NC_015731.1 KEGG: lch:Lcho_2325 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1482655 10933446 Nit79A3_1353 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004694586.1 1481963 D 261292 CDS YP_004694587.1 339482801 10933447 complement(1482720..1483388) 1 NC_015731.1 PFAM: Protein of unknown function DUF1614; KEGG: nhl:Nhal_3859 protein of unknown function DUF1614; hypothetical protein 1483388 10933447 Nit79A3_1354 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694587.1 1482720 R 261292 CDS YP_004694588.1 339482802 10933448 complement(1483732..1483920) 1 NC_015731.1 KEGG: gbm:Gbem_0768 hypothetical protein; hypothetical protein 1483920 10933448 Nit79A3_1355 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694588.1 1483732 R 261292 CDS YP_004694589.1 339482803 10933449 complement(1483917..1484489) 1 NC_015731.1 KEGG: app:CAP2UW1_0348 hypothetical protein; hypothetical protein 1484489 10933449 Nit79A3_1356 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694589.1 1483917 R 261292 CDS YP_004694590.1 339482804 10933450 complement(1484489..1484815) 1 NC_015731.1 hypothetical protein 1484815 10933450 Nit79A3_1357 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694590.1 1484489 R 261292 CDS YP_004694591.1 339482805 10933451 complement(1484822..1485361) 1 NC_015731.1 hypothetical protein 1485361 10933451 Nit79A3_1358 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694591.1 1484822 R 261292 CDS YP_004694592.1 339482806 10933452 complement(1485451..1486092) 1 NC_015731.1 KEGG: ctt:CtCNB1_2565 probable mannitol operon repressor; hypothetical protein 1486092 10933452 Nit79A3_1359 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694592.1 1485451 R 261292 CDS YP_004694593.1 339482807 10933453 complement(1486421..1489819) 1 NC_015731.1 manually curated; PFAM: Peptidase M28; PDZ/DHR/GLGF; KEGG: nit:NAL212_2064 peptidase M28; SMART: PDZ/DHR/GLGF; peptidase M28 1489819 10933453 Nit79A3_1360 Nitrosomonas sp. Is79A3 peptidase M28 YP_004694593.1 1486421 R 261292 CDS YP_004694594.1 339482808 10933454 1489846..1489950 1 NC_015731.1 manually curated; hypothetical protein 1489950 10933454 Nit79A3_1361 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694594.1 1489846 D 261292 CDS YP_004694595.1 339482809 10933456 complement(1490237..1491271) 1 NC_015731.1 KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase 1491271 10933456 Nit79A3_1363 Nitrosomonas sp. Is79A3 isxo7 transposase YP_004694595.1 1490237 R 261292 CDS YP_004694596.1 339482810 10933457 1491314..1494226 1 NC_015731.1 KEGG: noc:Noc_1846 hypothetical protein; hypothetical protein 1494226 10933457 Nit79A3_1364 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694596.1 1491314 D 261292 CDS YP_004694597.1 339482811 10933458 1494284..1495384 1 NC_015731.1 PFAM: WD40-like Beta Propeller; KEGG: nit:NAL212_2061 WD40-like beta propeller containing protein; hypothetical protein 1495384 10933458 Nit79A3_1365 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694597.1 1494284 D 261292 CDS YP_004694598.1 339482812 10933459 1495759..1496568 1 NC_015731.1 KEGG: nit:NAL212_2071 hypothetical protein; hypothetical protein 1496568 10933459 Nit79A3_1366 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694598.1 1495759 D 261292 CDS YP_004694599.1 339482813 10933460 1496695..1497747 1 NC_015731.1 PFAM: Haemolysin-type calcium-binding region; KEGG: nit:NAL212_2070 hemolysin-type calcium-binding region; Hemolysin-type calcium-binding protein 1497747 10933460 Nit79A3_1367 Nitrosomonas sp. Is79A3 Hemolysin-type calcium-binding protein YP_004694599.1 1496695 D 261292 CDS YP_004694600.1 339482814 10933461 complement(1497826..1499160) 1 NC_015731.1 KEGG: nit:NAL212_2060 hypothetical protein; hypothetical protein 1499160 10933461 Nit79A3_1368 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694600.1 1497826 R 261292 CDS YP_004694601.1 339482815 10933462 complement(1499180..1499629) 1 NC_015731.1 KEGG: nit:NAL212_2059 hypothetical protein; hypothetical protein 1499629 10933462 Nit79A3_1369 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694601.1 1499180 R 261292 CDS YP_004694602.1 339482816 10933463 1499802..1501265 1 NC_015731.1 TIGRFAM: IMP dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; KEGG: nit:NAL212_2058 inosine-5'-monophosphate dehydrogenase; SMART: Cystathionine beta-synthase, core; inosine-5'-monophosphate dehydrogenase 1501265 10933463 Nit79A3_1370 Nitrosomonas sp. Is79A3 inosine-5'-monophosphate dehydrogenase YP_004694602.1 1499802 D 261292 CDS YP_004694603.1 339482817 10933464 1501278..1502840 1 NC_015731.1 TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; HAMAP: GMP synthase [glutamine-hydrolyzing]; KEGG: nit:NAL212_2057 GMP synthase, large subunit; PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; GMP synthase 1502840 10933464 Nit79A3_1371 Nitrosomonas sp. Is79A3 GMP synthase YP_004694603.1 1501278 D 261292 CDS YP_004694604.1 339482818 10933465 1503191..1504387 1 NC_015731.1 PFAM: Integrase, catalytic core, phage; KEGG: ajs:Ajs_2546 phage integrase; integrase 1504387 10933465 Nit79A3_1372 Nitrosomonas sp. Is79A3 integrase YP_004694604.1 1503191 D 261292 CDS YP_004694605.1 339482819 10933466 complement(1504374..1504607) 1 NC_015731.1 PFAM: Prophage CP4-57 regulatory; KEGG: maq:Maqu_1725 phage transcriptional regulator, AlpA; prophage CP4-57 regulator 1504607 10933466 Nit79A3_1373 Nitrosomonas sp. Is79A3 prophage CP4-57 regulator YP_004694605.1 1504374 R 261292 CDS YP_004694606.1 339482820 10933467 complement(1504622..1504846) 1 NC_015731.1 hypothetical protein 1504846 10933467 Nit79A3_1374 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694606.1 1504622 R 261292 CDS YP_004694607.1 339482821 10933468 complement(1504849..1505175) 1 NC_015731.1 KEGG: xau:Xaut_3599 hypothetical protein; hypothetical protein 1505175 10933468 Nit79A3_1375 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694607.1 1504849 R 261292 CDS YP_004694608.1 339482822 10933469 complement(1505175..1505378) 1 NC_015731.1 hypothetical protein 1505378 10933469 Nit79A3_1376 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694608.1 1505175 R 261292 CDS YP_004694609.1 339482823 10933470 complement(1505371..1505598) 1 NC_015731.1 hypothetical protein 1505598 10933470 Nit79A3_1377 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694609.1 1505371 R 261292 CDS YP_004694610.1 339482824 10933471 complement(1505582..1505770) 1 NC_015731.1 hypothetical protein 1505770 10933471 Nit79A3_1378 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694610.1 1505582 R 261292 CDS YP_004694611.1 339482825 10933472 complement(1505930..1506304) 1 NC_015731.1 hypothetical protein 1506304 10933472 Nit79A3_1379 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694611.1 1505930 R 261292 CDS YP_004694612.1 339482826 10933473 complement(1506347..1506874) 1 NC_015731.1 KEGG: afr:AFE_1128 hypothetical protein; hypothetical protein 1506874 10933473 Nit79A3_1380 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694612.1 1506347 R 261292 CDS YP_004694613.1 339482827 10933474 complement(1506894..1507358) 1 NC_015731.1 KEGG: nmu:Nmul_A2227 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding; single-strand binding protein 1507358 10933474 Nit79A3_1381 Nitrosomonas sp. Is79A3 single-strand binding protein YP_004694613.1 1506894 R 261292 CDS YP_004694614.1 339482828 10933476 complement(1507593..1507865) 1 NC_015731.1 hypothetical protein 1507865 10933476 Nit79A3_1383 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694614.1 1507593 R 261292 CDS YP_004694615.1 339482829 10933477 complement(1507876..1508256) 1 NC_015731.1 KEGG: pap:PSPA7_2371 hypothetical protein; hypothetical protein 1508256 10933477 Nit79A3_1384 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694615.1 1507876 R 261292 CDS YP_004694616.1 339482830 10933478 complement(1508249..1508437) 1 NC_015731.1 hypothetical protein 1508437 10933478 Nit79A3_1385 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694616.1 1508249 R 261292 CDS YP_004694617.1 339482831 10933479 complement(1508630..1509244) 1 NC_015731.1 KEGG: hypothetical protein; hypothetical protein 1509244 10933479 Nit79A3_1386 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694617.1 1508630 R 261292 CDS YP_004694618.1 339482832 10933480 complement(1509237..1509800) 1 NC_015731.1 KEGG: pst:PSPTO_4056 hypothetical protein; hypothetical protein 1509800 10933480 Nit79A3_1387 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694618.1 1509237 R 261292 CDS YP_004694619.1 339482833 10933481 complement(1509787..1510428) 1 NC_015731.1 KEGG: sml:Smlt1913 hypothetical protein; hypothetical protein 1510428 10933481 Nit79A3_1388 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694619.1 1509787 R 261292 CDS YP_004694620.1 339482834 10933482 complement(1510421..1510588) 1 NC_015731.1 hypothetical protein 1510588 10933482 Nit79A3_1389 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694620.1 1510421 R 261292 CDS YP_004694621.1 339482835 10933483 complement(1510592..1512310) 1 NC_015731.1 KEGG: bpt:Bpet0950 RecF protein; RecF protein 1512310 10933483 Nit79A3_1390 Nitrosomonas sp. Is79A3 RecF protein YP_004694621.1 1510592 R 261292 CDS YP_004694622.1 339482836 10933484 complement(1512313..1512615) 1 NC_015731.1 hypothetical protein 1512615 10933484 Nit79A3_1391 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694622.1 1512313 R 261292 CDS YP_004694623.1 339482837 10933485 complement(1512618..1513505) 1 NC_015731.1 PFAM: exonuclease, RdgC; KEGG: bph:Bphy_4738 recombination associated protein; exonuclease RdgC 1513505 10933485 Nit79A3_1392 Nitrosomonas sp. Is79A3 exonuclease RdgC YP_004694623.1 1512618 R 261292 CDS YP_004694624.1 339482838 10933486 complement(1513521..1514093) 1 NC_015731.1 hypothetical protein 1514093 10933486 Nit79A3_1393 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694624.1 1513521 R 261292 CDS YP_004694625.1 339482839 10933487 complement(1514096..1515076) 1 NC_015731.1 KEGG: bgl:bglu_1g15310 hypothetical protein; hypothetical protein 1515076 10933487 Nit79A3_1394 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694625.1 1514096 R 261292 CDS YP_004694626.1 339482840 10933488 complement(1515082..1515897) 1 NC_015731.1 manually curated; KEGG: bgl:bglu_1g15320 hypothetical protein; hypothetical protein 1515897 10933488 Nit79A3_1395 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694626.1 1515082 R 261292 CDS YP_004694627.1 339482841 10933489 complement(1515991..1516140) 1 NC_015731.1 hypothetical protein 1516140 10933489 Nit79A3_1396 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694627.1 1515991 R 261292 CDS YP_004694628.1 339482842 10933490 complement(1516137..1516454) 1 NC_015731.1 hypothetical protein 1516454 10933490 Nit79A3_1397 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694628.1 1516137 R 261292 CDS YP_004694629.1 339482843 10933491 complement(1516451..1516597) 1 NC_015731.1 hypothetical protein 1516597 10933491 Nit79A3_1398 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694629.1 1516451 R 261292 CDS YP_004694630.1 339482844 10933492 complement(1516792..1517877) 1 NC_015731.1 PFAM: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 1517877 10933492 Nit79A3_1399 Nitrosomonas sp. Is79A3 molecular chaperone DnaJ YP_004694630.1 1516792 R 261292 CDS YP_004694631.1 339482845 10933493 complement(1517899..1518675) 1 NC_015731.1 KEGG: mep:MPQ_2006 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1518675 10933493 Nit79A3_1400 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004694631.1 1517899 R 261292 CDS YP_004694632.1 339482846 10933494 complement(1518772..1519134) 1 NC_015731.1 KEGG: net:Neut_1484 phage repressor; phage repressor 1519134 10933494 Nit79A3_1401 Nitrosomonas sp. Is79A3 phage repressor YP_004694632.1 1518772 R 261292 CDS YP_004694633.1 339482847 10933495 1519222..1519476 1 NC_015731.1 manually curated; KEGG: net:Neut_1483 hypothetical protein; hypothetical protein 1519476 10933495 Nit79A3_1402 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694633.1 1519222 D 261292 CDS YP_004694634.1 339482848 10933496 1519518..1520117 1 NC_015731.1 KEGG: axy:AXYL_02049 hypothetical protein; hypothetical protein 1520117 10933496 Nit79A3_1403 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694634.1 1519518 D 261292 CDS YP_004694635.1 339482849 10933497 1520381..1521202 1 NC_015731.1 KEGG: rpf:Rpic12D_3448 hypothetical protein; hypothetical protein 1521202 10933497 Nit79A3_1404 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694635.1 1520381 D 261292 CDS YP_004694636.1 339482850 10933498 1521174..1521764 1 NC_015731.1 KEGG: lhk:LHK_01787 hypothetical protein; hypothetical protein 1521764 10933498 Nit79A3_1405 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694636.1 1521174 D 261292 CDS YP_004694637.1 339482851 10933499 1522077..1522427 1 NC_015731.1 hypothetical protein 1522427 10933499 Nit79A3_1406 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694637.1 1522077 D 261292 CDS YP_004694638.1 339482852 10933500 1522432..1522764 1 NC_015731.1 hypothetical protein 1522764 10933500 Nit79A3_1407 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694638.1 1522432 D 261292 CDS YP_004694639.1 339482853 10933501 1522779..1522988 1 NC_015731.1 hypothetical protein 1522988 10933501 Nit79A3_1408 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694639.1 1522779 D 261292 CDS YP_004694640.1 339482854 10933502 1522992..1523684 1 NC_015731.1 PFAM: DNA methylase N-4/N-6; KEGG: seu:SEQ_0158 phage DNA methylase; DNA methylase N-4/N-6 domain-containing protein 1523684 10933502 Nit79A3_1409 Nitrosomonas sp. Is79A3 DNA methylase N-4/N-6 domain-containing protein YP_004694640.1 1522992 D 261292 CDS YP_004694641.1 339482855 10933503 1523681..1524388 1 NC_015731.1 hypothetical protein 1524388 10933503 Nit79A3_1410 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694641.1 1523681 D 261292 CDS YP_004694642.1 339482856 10933504 1524399..1524809 1 NC_015731.1 hypothetical protein 1524809 10933504 Nit79A3_1411 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694642.1 1524399 D 261292 CDS YP_004694643.1 339482857 10933505 1524812..1525540 1 NC_015731.1 PFAM: Phage antirepressor protein; Phage regulatory protein, Rha-like; KEGG: btr:Btr_0527 hypothetical protein; phage antirepressor protein 1525540 10933505 Nit79A3_1412 Nitrosomonas sp. Is79A3 phage antirepressor protein YP_004694643.1 1524812 D 261292 CDS YP_004694644.1 339482858 10933506 1526017..1526343 1 NC_015731.1 hypothetical protein 1526343 10933506 Nit79A3_1413 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694644.1 1526017 D 261292 CDS YP_004694645.1 339482859 10933507 1526361..1526732 1 NC_015731.1 hypothetical protein 1526732 10933507 Nit79A3_1414 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694645.1 1526361 D 261292 CDS YP_004694646.1 339482860 10933508 1526713..1526907 1 NC_015731.1 hypothetical protein 1526907 10933508 Nit79A3_1415 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694646.1 1526713 D 261292 CDS YP_004694647.1 339482861 10933509 1526904..1527398 1 NC_015731.1 KEGG: ect:ECIAI39_2692 hypothetical protein; hypothetical protein 1527398 10933509 Nit79A3_1416 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694647.1 1526904 D 261292 CDS YP_004694648.1 339482862 10933510 1527456..1528109 1 NC_015731.1 SMART: Helix-turn-helix type 3; KEGG: ajs:Ajs_0932 XRE family transcriptional regulator; helix-turn-helix domain-containing protein 1528109 10933510 Nit79A3_1417 Nitrosomonas sp. Is79A3 helix-turn-helix domain-containing protein YP_004694648.1 1527456 D 261292 CDS YP_004694649.1 339482863 10933511 1528116..1528979 1 NC_015731.1 KEGG: ajs:Ajs_0939 hypothetical protein; hypothetical protein 1528979 10933511 Nit79A3_1418 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694649.1 1528116 D 261292 CDS YP_004694650.1 339482864 10933512 1528972..1530492 1 NC_015731.1 KEGG: bvi:Bcep1808_7700 hypothetical protein; hypothetical protein 1530492 10933512 Nit79A3_1419 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694650.1 1528972 D 261292 CDS YP_004694651.1 339482865 10933513 1530470..1530838 1 NC_015731.1 PFAM: Phosphopantetheine-binding; KEGG: aae:aq_1717a acyl carrier protein; phosphopantetheine-binding protein 1530838 10933513 Nit79A3_1420 Nitrosomonas sp. Is79A3 phosphopantetheine-binding protein YP_004694651.1 1530470 D 261292 CDS YP_004694652.1 339482866 10933514 1530854..1531219 1 NC_015731.1 PFAM: DeoxyUTP pyrophosphatase domain; KEGG: tkm:TK90_2717 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; deoxyUTP pyrophosphatase 1531219 10933514 Nit79A3_1421 Nitrosomonas sp. Is79A3 deoxyUTP pyrophosphatase YP_004694652.1 1530854 D 261292 CDS YP_004694653.1 339482867 10933515 complement(1531365..1532636) 1 NC_015731.1 KEGG: dak:DaAHT2_2600 hypothetical protein; hypothetical protein 1532636 10933515 Nit79A3_1422 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694653.1 1531365 R 261292 CDS YP_004694654.1 339482868 10933516 complement(1532671..1533411) 1 NC_015731.1 PFAM: Phage Gp37Gp68; KEGG: rpf:Rpic12D_2516 Gp37Gp68 family protein; Gp37Gp68 family protein 1533411 10933516 Nit79A3_1423 Nitrosomonas sp. Is79A3 Gp37Gp68 family protein YP_004694654.1 1532671 R 261292 CDS YP_004694655.1 339482869 10933517 complement(1533463..1533936) 1 NC_015731.1 KEGG: rru:Rru_A0637 hypothetical protein; hypothetical protein 1533936 10933517 Nit79A3_1424 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694655.1 1533463 R 261292 CDS YP_004694656.1 339482870 10933518 complement(1533933..1534151) 1 NC_015731.1 hypothetical protein 1534151 10933518 Nit79A3_1425 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694656.1 1533933 R 261292 CDS YP_004694657.1 339482871 10933519 complement(1534262..1534591) 1 NC_015731.1 KEGG: bgl:bglu_1g15190 hypothetical protein; hypothetical protein 1534591 10933519 Nit79A3_1426 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694657.1 1534262 R 261292 CDS YP_004694658.1 339482872 10933520 complement(1534588..1535001) 1 NC_015731.1 KEGG: slt:Slit_0211 hypothetical protein; hypothetical protein 1535001 10933520 Nit79A3_1427 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694658.1 1534588 R 261292 CDS YP_004694659.1 339482873 10933521 complement(1535013..1535399) 1 NC_015731.1 PFAM: Mor transcription activator; KEGG: nit:NAL212_3027 Mor transcription activator domain-containing protein; Mor transcription activator domain-containing protein 1535399 10933521 Nit79A3_1428 Nitrosomonas sp. Is79A3 Mor transcription activator domain-containing protein YP_004694659.1 1535013 R 261292 CDS YP_004694660.1 339482874 10933522 1535887..1536540 1 NC_015731.1 KEGG: dar:Daro_1917 hypothetical protein; hypothetical protein 1536540 10933522 Nit79A3_1429 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694660.1 1535887 D 261292 CDS YP_004694661.1 339482875 10933523 1536557..1536934 1 NC_015731.1 hypothetical protein 1536934 10933523 Nit79A3_1430 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694661.1 1536557 D 261292 CDS YP_004694662.1 339482876 10933524 complement(1537064..1539085) 1 NC_015731.1 PFAM: Lytic transglycosylase-like, catalytic; KEGG: bvi:Bcep1808_7745 lytic transglycosylase, catalytic; lytic transglycosylase 1539085 10933524 Nit79A3_1431 Nitrosomonas sp. Is79A3 lytic transglycosylase YP_004694662.1 1537064 R 261292 CDS YP_004694663.1 339482877 10933525 complement(1539094..1540005) 1 NC_015731.1 KEGG: ajs:Ajs_0938 hypothetical protein; hypothetical protein 1540005 10933525 Nit79A3_1432 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694663.1 1539094 R 261292 CDS YP_004694664.1 339482878 10933526 complement(1540009..1541664) 1 NC_015731.1 KEGG: bvi:Bcep1808_7747 hypothetical protein; hypothetical protein 1541664 10933526 Nit79A3_1433 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694664.1 1540009 R 261292 CDS YP_004694665.1 339482879 10933527 1541828..1542676 1 NC_015731.1 KEGG: bvi:Bcep1808_7774 hypothetical protein; hypothetical protein 1542676 10933527 Nit79A3_1434 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694665.1 1541828 D 261292 CDS YP_004694666.1 339482880 10933528 1542685..1543410 1 NC_015731.1 KEGG: bvi:Bcep1808_7773 hypothetical protein; hypothetical protein 1543410 10933528 Nit79A3_1435 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694666.1 1542685 D 261292 CDS YP_004694667.1 339482881 10933529 1543410..1543742 1 NC_015731.1 hypothetical protein 1543742 10933529 Nit79A3_1436 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694667.1 1543410 D 261292 CDS YP_004694668.1 339482882 10933530 1543739..1544227 1 NC_015731.1 KEGG: bvi:Bcep1808_7772 hypothetical protein; hypothetical protein 1544227 10933530 Nit79A3_1437 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694668.1 1543739 D 261292 CDS YP_004694669.1 339482883 10933531 1544239..1544571 1 NC_015731.1 KEGG: bvi:Bcep1808_7767 hypothetical protein; hypothetical protein 1544571 10933531 Nit79A3_1438 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694669.1 1544239 D 261292 CDS YP_004694670.1 339482884 10933532 1544581..1545666 1 NC_015731.1 KEGG: ajs:Ajs_0933 hypothetical protein; hypothetical protein 1545666 10933532 Nit79A3_1439 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694670.1 1544581 D 261292 CDS YP_004694671.1 339482885 10933533 1545674..1546162 1 NC_015731.1 KEGG: bvi:Bcep1808_7765 hypothetical protein; hypothetical protein 1546162 10933533 Nit79A3_1440 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694671.1 1545674 D 261292 CDS YP_004694672.1 339482886 10933534 1546293..1547987 1 NC_015731.1 KEGG: bvi:Bcep1808_7737 hypothetical protein; hypothetical protein 1547987 10933534 Nit79A3_1441 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694672.1 1546293 D 261292 CDS YP_004694673.1 339482887 10933535 1548045..1548551 1 NC_015731.1 KEGG: uma:UM05181.1 hypothetical protein; hypothetical protein 1548551 10933535 Nit79A3_1442 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694673.1 1548045 D 261292 CDS YP_004694674.1 339482888 10933536 1548558..1550423 1 NC_015731.1 KEGG: bvi:Bcep1808_7735 hypothetical protein; hypothetical protein 1550423 10933536 Nit79A3_1443 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694674.1 1548558 D 261292 CDS YP_004694675.1 339482889 10933537 1550457..1551155 1 NC_015731.1 KEGG: bvi:Bcep1808_7734 hypothetical protein; hypothetical protein 1551155 10933537 Nit79A3_1444 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694675.1 1550457 D 261292 CDS YP_004694676.1 339482890 10933538 1551234..1552040 1 NC_015731.1 KEGG: ajs:Ajs_0937 hypothetical protein; hypothetical protein 1552040 10933538 Nit79A3_1445 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694676.1 1551234 D 261292 CDS YP_004694677.1 339482891 10933539 1552369..1553148 1 NC_015731.1 KEGG: bvi:Bcep1808_7732 hypothetical protein; hypothetical protein 1553148 10933539 Nit79A3_1446 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694677.1 1552369 D 261292 CDS YP_004694678.1 339482892 10933540 1553132..1553356 1 NC_015731.1 hypothetical protein 1553356 10933540 Nit79A3_1447 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694678.1 1553132 D 261292 CDS YP_004694679.1 339482893 10933541 1553359..1553670 1 NC_015731.1 hypothetical protein 1553670 10933541 Nit79A3_1448 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694679.1 1553359 D 261292 CDS YP_004694680.1 339482894 10933542 1553674..1554138 1 NC_015731.1 PFAM: Peptidase M15A, C-terminal; KEGG: ppw:PputW619_1627 peptidase M15A; peptidase M15A 1554138 10933542 Nit79A3_1449 Nitrosomonas sp. Is79A3 peptidase M15A YP_004694680.1 1553674 D 261292 CDS YP_004694681.1 339482895 10933543 1554154..1554684 1 NC_015731.1 hypothetical protein 1554684 10933543 Nit79A3_1450 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694681.1 1554154 D 261292 CDS YP_004694682.1 339482896 10933544 1554681..1554998 1 NC_015731.1 hypothetical protein 1554998 10933544 Nit79A3_1451 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694682.1 1554681 D 261292 CDS YP_004694683.1 339482897 10933545 1554998..1555579 1 NC_015731.1 KEGG: cai:Caci_6403 Ig family protein; hypothetical protein 1555579 10933545 Nit79A3_1452 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694683.1 1554998 D 261292 CDS YP_004694684.1 339482898 10933546 1555593..1556624 1 NC_015731.1 hypothetical protein 1556624 10933546 Nit79A3_1453 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694684.1 1555593 D 261292 CDS YP_004694685.1 339482899 10933547 1556621..1556923 1 NC_015731.1 hypothetical protein 1556923 10933547 Nit79A3_1454 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694685.1 1556621 D 261292 CDS YP_004694686.1 339482900 10933548 1556946..1557518 1 NC_015731.1 KEGG: lic:LIC10163 hypothetical protein; hypothetical protein 1557518 10933548 Nit79A3_1455 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694686.1 1556946 D 261292 CDS YP_004694687.1 339482901 10933549 1557654..1558154 1 NC_015731.1 KEGG: bvi:Bcep1808_7743 hypothetical protein; hypothetical protein 1558154 10933549 Nit79A3_1456 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694687.1 1557654 D 261292 CDS YP_004694688.1 339482902 10933550 1558189..1558545 1 NC_015731.1 KEGG: fri:FraEuI1c_5846 polysaccharide deacetylase; hypothetical protein 1558545 10933550 Nit79A3_1457 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694688.1 1558189 D 261292 CDS YP_004694689.1 339482903 10933551 1558555..1558941 1 NC_015731.1 KEGG: bvi:Bcep1808_7742 hypothetical protein; hypothetical protein 1558941 10933551 Nit79A3_1458 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694689.1 1558555 D 261292 CDS YP_004694690.1 339482904 10933552 1558952..1559860 1 NC_015731.1 KEGG: bvi:Bcep1808_7740 hypothetical protein; hypothetical protein 1559860 10933552 Nit79A3_1459 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694690.1 1558952 D 261292 CDS YP_004694691.1 339482905 10933553 1559865..1560371 1 NC_015731.1 KEGG: bvi:Bcep1808_7739 hypothetical protein; hypothetical protein 1560371 10933553 Nit79A3_1460 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694691.1 1559865 D 261292 CDS YP_004694692.1 339482906 10933554 1560453..1560938 1 NC_015731.1 KEGG: bvi:Bcep1808_7738 hypothetical protein; hypothetical protein 1560938 10933554 Nit79A3_1461 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694692.1 1560453 D 261292 CDS YP_004694693.1 339482907 10933555 1560935..1561405 1 NC_015731.1 KEGG: vok:COSY_0067 nuclease; PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like); nuclease 1561405 10933555 Nit79A3_1462 Nitrosomonas sp. Is79A3 nuclease YP_004694693.1 1560935 D 261292 CDS YP_004694694.1 339482908 10933556 1561520..1563385 1 NC_015731.1 KEGG: bvi:Bcep1808_7755 hypothetical protein; hypothetical protein 1563385 10933556 Nit79A3_1463 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694694.1 1561520 D 261292 CDS YP_004694695.1 339482909 10933557 1563392..1563763 1 NC_015731.1 KEGG: rcp:RCAP_rcc00984 hypothetical protein; hypothetical protein 1563763 10933557 Nit79A3_1464 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694695.1 1563392 D 261292 CDS YP_004694696.1 339482910 10933558 1563760..1565643 1 NC_015731.1 KEGG: mxa:MXAN_4488 hypothetical protein; hypothetical protein 1565643 10933558 Nit79A3_1465 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694696.1 1563760 D 261292 CDS YP_004694697.1 339482911 10933559 1565640..1567097 1 NC_015731.1 KEGG: afe:Lferr_0235 hypothetical protein; hypothetical protein 1567097 10933559 Nit79A3_1466 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694697.1 1565640 D 261292 CDS YP_004694698.1 339482912 10933560 complement(1567129..1567839) 1 NC_015731.1 KEGG: tcx:Tcr_1420 hypothetical protein; hypothetical protein 1567839 10933560 Nit79A3_1467 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694698.1 1567129 R 261292 CDS YP_004694699.1 339482913 10933561 complement(1567933..1568322) 1 NC_015731.1 PFAM: Uncharacterised protein family UPF0150; KEGG: axy:AXYL_04720 hypothetical protein; hypothetical protein 1568322 10933561 Nit79A3_1468 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694699.1 1567933 R 261292 CDS YP_004694700.1 339482914 10933562 complement(1568333..1568620) 1 NC_015731.1 PFAM: YcfA-like; KEGG: bpe:BP0939 hypothetical protein; hypothetical protein 1568620 10933562 Nit79A3_1469 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694700.1 1568333 R 261292 CDS YP_004694701.1 339482915 10933563 1568647..1575048 1 NC_015731.1 KEGG: bvi:Bcep1808_7753 SNF2-related protein; PFAM: DNA methylase, adenine-specific; SMART: DEAD-like helicase, N-terminal; N-6 DNA methylase 1575048 10933563 Nit79A3_1470 Nitrosomonas sp. Is79A3 N-6 DNA methylase YP_004694701.1 1568647 D 261292 CDS YP_004694702.1 339482916 10933564 1575063..1575479 1 NC_015731.1 KEGG: bvi:Bcep1808_7752 hypothetical protein; hypothetical protein 1575479 10933564 Nit79A3_1471 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694702.1 1575063 D 261292 CDS YP_004694703.1 339482917 10933565 1575858..1576868 1 NC_015731.1 KEGG: bac:BamMC406_3185 hypothetical protein; hypothetical protein 1576868 10933565 Nit79A3_1472 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694703.1 1575858 D 261292 CDS YP_004694704.1 339482918 10933566 complement(1577030..1577458) 1 NC_015731.1 KEGG: nit:NAL212_1769 hypothetical protein; hypothetical protein 1577458 10933566 Nit79A3_1473 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694704.1 1577030 R 261292 CDS YP_004694705.1 339482919 10933567 1577808..1578104 1 NC_015731.1 KEGG: bvi:Bcep1808_7666 hypothetical protein; hypothetical protein 1578104 10933567 Nit79A3_1474 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694705.1 1577808 D 261292 CDS YP_004694706.1 339482920 10933568 1578106..1579599 1 NC_015731.1 KEGG: bvi:Bcep1808_7665 hypothetical protein; hypothetical protein 1579599 10933568 Nit79A3_1475 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694706.1 1578106 D 261292 CDS YP_004694707.1 339482921 10933569 1579600..1580310 1 NC_015731.1 KEGG: bvi:Bcep1808_7775 hypothetical protein; hypothetical protein 1580310 10933569 Nit79A3_1476 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694707.1 1579600 D 261292 CDS YP_004694708.1 339482922 10933570 1580307..1580948 1 NC_015731.1 KEGG: pct:PC1_2656 tail fiber repeat 2 protein; tail fiber repeat 2 protein 1580948 10933570 Nit79A3_1477 Nitrosomonas sp. Is79A3 tail fiber repeat 2 protein YP_004694708.1 1580307 D 261292 CDS YP_004694709.1 339482923 10933571 1580963..1581289 1 NC_015731.1 hypothetical protein 1581289 10933571 Nit79A3_1478 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694709.1 1580963 D 261292 CDS YP_004694710.1 339482924 10933572 1581289..1582218 1 NC_015731.1 KEGG: sit:TM1040_1287 secreted serine protease; secreted serine protease 1582218 10933572 Nit79A3_1479 Nitrosomonas sp. Is79A3 secreted serine protease YP_004694710.1 1581289 D 261292 CDS YP_004694711.1 339482925 10933573 1582221..1582397 1 NC_015731.1 hypothetical protein 1582397 10933573 Nit79A3_1480 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694711.1 1582221 D 261292 CDS YP_004694712.1 339482926 10933574 1582397..1582852 1 NC_015731.1 KEGG: sit:TM1040_1286 hypothetical protein; hypothetical protein 1582852 10933574 Nit79A3_1481 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694712.1 1582397 D 261292 CDS YP_004694713.1 339482927 10933575 complement(1582761..1582937) 1 NC_015731.1 hypothetical protein 1582937 10933575 Nit79A3_1482 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694713.1 1582761 R 261292 CDS YP_004694714.1 339482928 10933576 1582994..1583314 1 NC_015731.1 hypothetical protein 1583314 10933576 Nit79A3_1483 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694714.1 1582994 D 261292 CDS YP_004694715.1 339482929 10933577 1583314..1584087 1 NC_015731.1 hypothetical protein 1584087 10933577 Nit79A3_1484 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694715.1 1583314 D 261292 CDS YP_004694716.1 339482930 10933578 1584084..1585175 1 NC_015731.1 KEGG: nit:NAL212_2626 hypothetical protein; hypothetical protein 1585175 10933578 Nit79A3_1485 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694716.1 1584084 D 261292 CDS YP_004694717.1 339482931 10933579 1585515..1586777 1 NC_015731.1 PFAM: Integrase, catalytic core, phage; KEGG: nit:NAL212_2056 integrase; integrase 1586777 10933579 Nit79A3_1486 Nitrosomonas sp. Is79A3 integrase YP_004694717.1 1585515 D 261292 CDS YP_004694718.1 339482932 10933580 1587348..1588655 1 NC_015731.1 KEGG: aba:Acid345_3092 hypothetical protein; hypothetical protein 1588655 10933580 Nit79A3_1487 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694718.1 1587348 D 261292 CDS YP_004694719.1 339482933 10933581 complement(1588773..1589069) 1 NC_015731.1 hypothetical protein 1589069 10933581 Nit79A3_1488 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694719.1 1588773 R 261292 CDS YP_004694720.1 339482934 10933582 complement(1589038..1589346) 1 NC_015731.1 hypothetical protein 1589346 10933582 Nit79A3_1489 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694720.1 1589038 R 261292 CDS YP_004694721.1 339482935 10933583 1589803..1590969 1 NC_015731.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: Lysophospholipase L2; alpha/beta hydrolase 1590969 10933583 Nit79A3_1490 Nitrosomonas sp. Is79A3 alpha/beta hydrolase YP_004694721.1 1589803 D 261292 CDS YP_004694722.1 339482936 10933584 complement(1591128..1591688) 1 NC_015731.1 PFAM: Resolvase, N-terminal; Resolvase, helix-turn-helix region; KEGG: nwa:Nwat_2435 resolvase domain-containing protein; Resolvase domain-containing protein 1591688 10933584 Nit79A3_1491 Nitrosomonas sp. Is79A3 Resolvase domain-containing protein YP_004694722.1 1591128 R 261292 CDS YP_004694723.1 339482937 10933585 1592115..1594199 1 NC_015731.1 KEGG: ecd:ECDH10B_1362 hypothetical protein; hypothetical protein 1594199 10933585 Nit79A3_1492 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694723.1 1592115 D 261292 CDS YP_004694724.1 339482938 10933587 complement(1594810..1594923) 1 NC_015731.1 hypothetical protein 1594923 10933587 Nit79A3_1494 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694724.1 1594810 R 261292 CDS YP_004694725.1 339482939 10933588 1595794..1596237 1 NC_015731.1 hypothetical protein 1596237 10933588 Nit79A3_1495 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694725.1 1595794 D 261292 CDS YP_004694726.1 339482940 10933589 1596306..1596554 1 NC_015731.1 TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; KEGG: meh:M301_0053 protein of unknown function DUF1555; PEP motif anchor domain-containing protein 1596554 10933589 Nit79A3_1496 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004694726.1 1596306 D 261292 CDS YP_004694727.1 339482941 10933590 complement(1596847..1599459) 1 NC_015731.1 KEGG: nit:NAL212_2045 hypothetical protein; hypothetical protein 1599459 10933590 Nit79A3_1497 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694727.1 1596847 R 261292 CDS YP_004694728.1 339482942 10933591 complement(1599654..1599836) 1 NC_015731.1 PFAM: Prophage CP4-57 regulatory; KEGG: nit:NAL212_2044 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA 1599836 10933591 Nit79A3_1498 Nitrosomonas sp. Is79A3 phage transcriptional regulator AlpA YP_004694728.1 1599654 R 261292 CDS YP_004694729.1 339482943 10933592 1599960..1600253 1 NC_015731.1 KEGG: nit:NAL212_2043 hypothetical protein; hypothetical protein 1600253 10933592 Nit79A3_1499 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694729.1 1599960 D 261292 CDS YP_004694730.1 339482944 10933594 complement(1601105..1601581) 1 NC_015731.1 hypothetical protein 1601581 10933594 Nit79A3_1501 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694730.1 1601105 R 261292 CDS YP_004694731.1 339482945 10933595 complement(1601691..1601942) 1 NC_015731.1 hypothetical protein 1601942 10933595 Nit79A3_1502 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694731.1 1601691 R 261292 CDS YP_004694732.1 339482946 10933596 complement(1602218..1602658) 1 NC_015731.1 KEGG: meh:M301_1818 transcriptional regulator, MerR family; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MarR family transcriptional regulator 1602658 10933596 Nit79A3_1503 Nitrosomonas sp. Is79A3 MarR family transcriptional regulator YP_004694732.1 1602218 R 261292 CDS YP_004694733.1 339482947 10933597 1602797..1603447 1 NC_015731.1 TIGRFAM: thiopurine S-methyltransferase, Se/Te detoxification family; HAMAP: Thiopurine S-methyltransferase; KEGG: nde:NIDE2804 thiopurine S-methyltransferase; PFAM: Thiopurine S-methyltransferase; thiopurine S-methyltransferase 1603447 10933597 Nit79A3_1504 Nitrosomonas sp. Is79A3 thiopurine S-methyltransferase YP_004694733.1 1602797 D 261292 CDS YP_004694734.1 339482948 10933598 1603454..1604257 1 NC_015731.1 PFAM: Protein of unknown function DUF81; KEGG: meh:M301_1819 protein of unknown function DUF81; hypothetical protein 1604257 10933598 Nit79A3_1505 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694734.1 1603454 D 261292 CDS YP_004694735.1 339482949 10933599 complement(1604493..1605845) 1 NC_015731.1 KEGG: nit:NAL212_1347 GTP-binding proten HflX; TIGRFAM: GTP-binding protein, HflX; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein HflX 1605845 10933599 Nit79A3_1506 Nitrosomonas sp. Is79A3 GTP-binding protein HflX YP_004694735.1 1604493 R 261292 CDS YP_004694736.1 339482950 10933603 1610799..1610981 1 NC_015731.1 hypothetical protein 1610981 10933603 Nit79A3_1510 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694736.1 1610799 D 261292 CDS YP_004694737.1 339482951 10933604 1611021..1612334 1 NC_015731.1 PFAM: FAD dependent oxidoreductase; KEGG: vap:Vapar_2011 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1612334 10933604 Nit79A3_1511 Nitrosomonas sp. Is79A3 FAD dependent oxidoreductase YP_004694737.1 1611021 D 261292 CDS YP_004694738.1 339482952 10933605 1612345..1613763 1 NC_015731.1 KEGG: nmu:Nmul_A1700 homospermidine synthase; homospermidine synthase 1613763 10933605 Nit79A3_1512 Nitrosomonas sp. Is79A3 homospermidine synthase YP_004694738.1 1612345 D 261292 CDS YP_004694739.1 339482953 10933606 complement(1613796..1613954) 1 NC_015731.1 hypothetical protein 1613954 10933606 Nit79A3_1513 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694739.1 1613796 R 261292 CDS YP_004694740.1 339482954 10933607 1613987..1616866 1 NC_015731.1 PFAM: Glycoside hydrolase, family 38, core; Glycosyl hydrolases 38, C-terminal; KEGG: kol:Kole_0478 glycoside hydrolase 38; glycoside hydrolase 38 1616866 10933607 Nit79A3_1514 Nitrosomonas sp. Is79A3 glycoside hydrolase 38 YP_004694740.1 1613987 D 261292 CDS YP_004694741.1 339482955 10933609 1617925..1618134 1 NC_015731.1 hypothetical protein 1618134 10933609 Nit79A3_1516 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694741.1 1617925 D 261292 CDS YP_004694742.1 339482956 10933610 1618140..1619348 1 NC_015731.1 PFAM: Glycosyl transferase, group 1; KEGG: nhl:Nhal_0699 glycosyl transferase group 1; group 1 glycosyl transferase 1619348 10933610 Nit79A3_1517 Nitrosomonas sp. Is79A3 group 1 glycosyl transferase YP_004694742.1 1618140 D 261292 CDS YP_004694743.1 339482957 10933611 complement(1619585..1620199) 1 NC_015731.1 KEGG: mmb:Mmol_1803 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1620199 10933611 Nit79A3_1518 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004694743.1 1619585 R 261292 CDS YP_004694744.1 339482958 10933612 complement(1620261..1620794) 1 NC_015731.1 KEGG: nit:NAL212_1338 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1620794 10933612 Nit79A3_1519 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004694744.1 1620261 R 261292 CDS YP_004694745.1 339482959 10933613 complement(1620902..1621168) 1 NC_015731.1 PFAM: Type IV pilus assembly PilZ; type IV pilus assembly PilZ 1621168 10933613 Nit79A3_1520 Nitrosomonas sp. Is79A3 type IV pilus assembly PilZ YP_004694745.1 1620902 R 261292 CDS YP_004694746.1 339482960 10933614 complement(1621452..1622216) 1 NC_015731.1 KEGG: nit:NAL212_0717 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; LuxR family transcriptional regulator 1622216 10933614 Nit79A3_1521 Nitrosomonas sp. Is79A3 LuxR family transcriptional regulator YP_004694746.1 1621452 R 261292 CDS YP_004694747.1 339482961 10933616 complement(1623126..1624205) 1 NC_015731.1 PFAM: Permease YjgP/YjgQ, predicted; KEGG: nit:NAL212_2669 permease YjgP/YjgQ family protein; permease YjgP/YjgQ family protein 1624205 10933616 Nit79A3_1523 Nitrosomonas sp. Is79A3 permease YjgP/YjgQ family protein YP_004694747.1 1623126 R 261292 CDS YP_004694748.1 339482962 10933617 complement(1624274..1625113) 1 NC_015731.1 KEGG: nit:NAL212_2668 hypothetical protein; hypothetical protein 1625113 10933617 Nit79A3_1524 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694748.1 1624274 R 261292 CDS YP_004694749.1 339482963 10933618 1625410..1626615 1 NC_015731.1 PFAM: Glycosyl transferase, group 1; KEGG: tra:Trad_0736 glycosyl transferase group 1 protein; group 1 glycosyl transferase 1626615 10933618 Nit79A3_1525 Nitrosomonas sp. Is79A3 group 1 glycosyl transferase YP_004694749.1 1625410 D 261292 CDS YP_004694750.1 339482964 10933619 1626617..1627813 1 NC_015731.1 PFAM: Glycosyl transferase, group 1; KEGG: tra:Trad_0736 glycosyl transferase group 1 protein; group 1 glycosyl transferase 1627813 10933619 Nit79A3_1526 Nitrosomonas sp. Is79A3 group 1 glycosyl transferase YP_004694750.1 1626617 D 261292 CDS YP_004694751.1 339482965 10933620 complement(1627765..1629480) 1 NC_015731.1 KEGG: avn:Avin_44230 ABC transporter protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 1629480 10933620 Nit79A3_1527 Nitrosomonas sp. Is79A3 ABC transporter YP_004694751.1 1627765 R 261292 CDS YP_004694752.1 339482966 10933621 1629898..1630905 1 NC_015731.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: apb:SAR116_1941 nucleotide sugar epimerase; NAD-dependent epimerase/dehydratase 1630905 10933621 Nit79A3_1528 Nitrosomonas sp. Is79A3 NAD-dependent epimerase/dehydratase YP_004694752.1 1629898 D 261292 CDS YP_004694753.1 339482967 10933622 1630902..1632242 1 NC_015731.1 KEGG: avn:Avin_27790 UDP-glucose 6-dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; nucleotide sugar dehydrogenase 1632242 10933622 Nit79A3_1529 Nitrosomonas sp. Is79A3 nucleotide sugar dehydrogenase YP_004694753.1 1630902 D 261292 CDS YP_004694754.1 339482968 10933623 complement(1632129..1632551) 1 NC_015731.1 KEGG: psa:PST_1428 lipoprotein; hypothetical protein 1632551 10933623 Nit79A3_1530 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694754.1 1632129 R 261292 CDS YP_004694755.1 339482969 10933624 1632784..1632897 1 NC_015731.1 PFAM: Heat shock protein 70; KEGG: rfr:Rfer_0832 heat shock protein 70; molecular chaperone DnaK 1632897 10933624 Nit79A3_1531 Nitrosomonas sp. Is79A3 molecular chaperone DnaK YP_004694755.1 1632784 D 261292 CDS YP_004694756.1 339482970 10933627 1636299..1636637 1 NC_015731.1 KEGG: nit:NAL212_1538 hypothetical protein; hypothetical protein 1636637 10933627 Nit79A3_1534 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694756.1 1636299 D 261292 CDS YP_004694757.1 339482971 10933628 1636696..1636896 1 NC_015731.1 hypothetical protein 1636896 10933628 Nit79A3_1535 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694757.1 1636696 D 261292 CDS YP_004694758.1 339482972 10933629 1636950..1637399 1 NC_015731.1 PFAM: Heat shock protein Hsp20; KEGG: nmu:Nmul_A1167 heat shock protein HSP20; heat shock protein Hsp20 1637399 10933629 Nit79A3_1536 Nitrosomonas sp. Is79A3 heat shock protein Hsp20 YP_004694758.1 1636950 D 261292 CDS YP_004694759.1 339482973 10933630 1637560..1637850 1 NC_015731.1 KEGG: app:CAP2UW1_2275 chaperonin Cpn10; HAMAP: Chaperonin Cpn10, subgroup; PFAM: Chaperonin Cpn10; molecular chaperone GroES 1637850 10933630 Nit79A3_1537 Nitrosomonas sp. Is79A3 molecular chaperone GroES YP_004694759.1 1637560 D 261292 CDS YP_004694760.1 339482974 10933631 1637884..1639506 1 NC_015731.1 TIGRFAM: Chaperonin Cpn60; HAMAP: 60 kDa chaperonin; KEGG: azo:azo0974 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; molecular chaperone GroEL 1639506 10933631 Nit79A3_1538 Nitrosomonas sp. Is79A3 molecular chaperone GroEL YP_004694760.1 1637884 D 261292 CDS YP_004694761.1 339482975 10933632 1639657..1640013 1 NC_015731.1 KEGG: tbd:Tbd_1444 hypothetical protein; hypothetical protein 1640013 10933632 Nit79A3_1539 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694761.1 1639657 D 261292 CDS YP_004694762.1 339482976 10933633 1640081..1640524 1 NC_015731.1 KEGG: nit:NAL212_2279 hypothetical protein; hypothetical protein 1640524 10933633 Nit79A3_1540 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694762.1 1640081 D 261292 CDS YP_004694763.1 339482977 10933634 1640541..1641086 1 NC_015731.1 KEGG: nit:NAL212_2278 hypothetical protein; hypothetical protein 1641086 10933634 Nit79A3_1541 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694763.1 1640541 D 261292 CDS YP_004694764.1 339482978 10933636 complement(1641476..1641799) 1 NC_015731.1 PFAM: Dopa 4,5-dioxygenase; KEGG: vha:VIBHAR_05556 4,5-dioxygenase; Dopa 45-dioxygenase 1641799 10933636 Nit79A3_1543 Nitrosomonas sp. Is79A3 Dopa 45-dioxygenase YP_004694764.1 1641476 R 261292 CDS YP_004694765.1 339482979 10933637 complement(1641822..1642205) 1 NC_015731.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nit:NAL212_2274 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 1642205 10933637 Nit79A3_1544 Nitrosomonas sp. Is79A3 Glyoxalase/bleomycin resistance protein/dioxygenase YP_004694765.1 1641822 R 261292 CDS YP_004694766.1 339482980 10933638 complement(1642396..1643676) 1 NC_015731.1 PFAM: FAD dependent oxidoreductase; KEGG: neu:NE2199 flavin-containing monooxygenase (FMO); FAD dependent oxidoreductase 1643676 10933638 Nit79A3_1545 Nitrosomonas sp. Is79A3 FAD dependent oxidoreductase YP_004694766.1 1642396 R 261292 CDS YP_004694767.1 339482981 10933639 complement(1643969..1645234) 1 NC_015731.1 KEGG: nit:NAL212_1825 hypothetical protein; hypothetical protein 1645234 10933639 Nit79A3_1546 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694767.1 1643969 R 261292 CDS YP_004694768.1 339482982 10933640 complement(1645326..1645691) 1 NC_015731.1 hypothetical protein 1645691 10933640 Nit79A3_1547 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694768.1 1645326 R 261292 CDS YP_004694769.1 339482983 10933641 complement(1645739..1646065) 1 NC_015731.1 KEGG: nit:NAL212_2068 lipoprotein; lipoprotein 1646065 10933641 Nit79A3_1548 Nitrosomonas sp. Is79A3 lipoprotein YP_004694769.1 1645739 R 261292 CDS YP_004694770.1 339482984 10933642 complement(1646454..1647020) 1 NC_015731.1 PFAM: NADPH-dependent FMN reductase; KEGG: nmu:Nmul_A1470 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1647020 10933642 Nit79A3_1549 Nitrosomonas sp. Is79A3 NADPH-dependent FMN reductase YP_004694770.1 1646454 R 261292 CDS YP_004694771.1 339482985 10933645 complement(1648327..1649529) 1 NC_015731.1 PFAM: Acyltransferase 3; KEGG: sli:Slin_3508 acyltransferase 3; acyltransferase 1649529 10933645 Nit79A3_1552 Nitrosomonas sp. Is79A3 acyltransferase YP_004694771.1 1648327 R 261292 CDS YP_004694772.1 339482986 10933646 1650407..1652365 1 NC_015731.1 KEGG: cvi:CV_1113 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; DNA topoisomerase, type IIA, subunit B, C-terminal; SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; DNA topoisomerase type IIA subunit B region 2 domain-containing protein 1652365 10933646 Nit79A3_1553 Nitrosomonas sp. Is79A3 DNA topoisomerase type IIA subunit B region 2 domain-containing protein YP_004694772.1 1650407 D 261292 CDS YP_004694773.1 339482987 10933647 1652372..1654756 1 NC_015731.1 TIGRFAM: DNA topoisomerase IV, subunit A, Gram-negative; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; KEGG: tmz:Tmz1t_2931 DNA topoisomerase IV subunit A; SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA topoisomerase IV subunit A 1654756 10933647 Nit79A3_1554 Nitrosomonas sp. Is79A3 DNA topoisomerase IV subunit A YP_004694773.1 1652372 D 261292 CDS YP_004694774.1 339482988 10933648 complement(1654959..1655948) 1 NC_015731.1 KEGG: nit:NAL212_2369 hopanoid-associated sugar epimerase; TIGRFAM: Hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; hopanoid-associated sugar epimerase 1655948 10933648 Nit79A3_1555 Nitrosomonas sp. Is79A3 hopanoid-associated sugar epimerase YP_004694774.1 1654959 R 261292 CDS YP_004694775.1 339482989 10933649 complement(1656025..1657095) 1 NC_015731.1 PFAM: Squalene/phytoene synthase; KEGG: nit:NAL212_2368 squalene/phytoene synthase; Squalene/phytoene synthase 1657095 10933649 Nit79A3_1556 Nitrosomonas sp. Is79A3 Squalene/phytoene synthase YP_004694775.1 1656025 R 261292 CDS YP_004694776.1 339482990 10933650 complement(1657167..1658420) 1 NC_015731.1 KEGG: nit:NAL212_2367 diaminopimelate decarboxylase; TIGRFAM: Diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase 1658420 10933650 Nit79A3_1557 Nitrosomonas sp. Is79A3 diaminopimelate decarboxylase YP_004694776.1 1657167 R 261292 CDS YP_004694777.1 339482991 10933651 complement(1658417..1658545) 1 NC_015731.1 KEGG: nit:NAL212_2366 hypothetical protein; hypothetical protein 1658545 10933651 Nit79A3_1558 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694777.1 1658417 R 261292 CDS YP_004694778.1 339482992 10933652 complement(1658786..1659415) 1 NC_015731.1 PFAM: Protein of unknown function DUF330; KEGG: nit:NAL212_2365 hypothetical protein; hypothetical protein 1659415 10933652 Nit79A3_1559 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694778.1 1658786 R 261292 CDS YP_004694779.1 339482993 10933653 complement(1659412..1660311) 1 NC_015731.1 PFAM: Mammalian cell entry related; KEGG: nit:NAL212_2364 mammalian cell entry related domain-containing protein; Mammalian cell entry related domain-containing protein 1660311 10933653 Nit79A3_1560 Nitrosomonas sp. Is79A3 Mammalian cell entry related domain-containing protein YP_004694779.1 1659412 R 261292 CDS YP_004694780.1 339482994 10933654 complement(1660284..1661114) 1 NC_015731.1 KEGG: nit:NAL212_2363 sulfate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 1661114 10933654 Nit79A3_1561 Nitrosomonas sp. Is79A3 ABC transporter YP_004694780.1 1660284 R 261292 CDS YP_004694781.1 339482995 10933655 complement(1661098..1662261) 1 NC_015731.1 KEGG: nit:NAL212_2362 hypothetical protein; TIGRFAM: Protein of unknown function DUF140; PFAM: Protein of unknown function DUF140; hypothetical protein 1662261 10933655 Nit79A3_1562 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694781.1 1661098 R 261292 CDS YP_004694782.1 339482996 10933656 complement(1662429..1663892) 1 NC_015731.1 KEGG: nit:NAL212_2361 cell wall hydrolase/autolysin; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; cell wall hydrolase/autolysin 1663892 10933656 Nit79A3_1563 Nitrosomonas sp. Is79A3 cell wall hydrolase/autolysin YP_004694782.1 1662429 R 261292 CDS YP_004694783.1 339482997 10933657 complement(1663856..1664320) 1 NC_015731.1 KEGG: nit:NAL212_2360 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; hypothetical protein 1664320 10933657 Nit79A3_1564 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694783.1 1663856 R 261292 CDS YP_004694784.1 339482998 10933658 1664357..1665469 1 NC_015731.1 KEGG: nit:NAL212_2359 iron-sulfur cluster binding protein; TIGRFAM: 4Fe-4S cluster binding; PFAM: Domain of unknown function DUF1730; iron-sulfur cluster binding protein 1665469 10933658 Nit79A3_1565 Nitrosomonas sp. Is79A3 iron-sulfur cluster binding protein YP_004694784.1 1664357 D 261292 CDS YP_004694785.1 339482999 10933659 1665466..1666677 1 NC_015731.1 TIGRFAM: Phosphoribosylglycinamide formyltransferase 2; HAMAP: Phosphoribosylglycinamide formyltransferase 2; KEGG: nit:NAL212_2358 phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; Phosphoribosylglycinamide formyltransferase 2 1666677 10933659 Nit79A3_1566 Nitrosomonas sp. Is79A3 Phosphoribosylglycinamide formyltransferase 2 YP_004694785.1 1665466 D 261292 CDS YP_004694786.1 339483000 10933660 1666707..1667615 1 NC_015731.1 PFAM: Aldose 1-epimerase; KEGG: nit:NAL212_2357 aldose 1-epimerase; aldose 1-epimerase 1667615 10933660 Nit79A3_1567 Nitrosomonas sp. Is79A3 aldose 1-epimerase YP_004694786.1 1666707 D 261292 CDS YP_004694787.1 339483001 10933661 1667705..1668730 1 NC_015731.1 hypothetical protein 1668730 10933661 Nit79A3_1568 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694787.1 1667705 D 261292 CDS YP_004694788.1 339483002 10933662 1668965..1670341 1 NC_015731.1 KEGG: nit:NAL212_0468 anion transporter; TIGRFAM: Sodium/sulphate symporter; PFAM: Sodium/sulphate symporter; anion transporter 1670341 10933662 Nit79A3_1569 Nitrosomonas sp. Is79A3 anion transporter YP_004694788.1 1668965 D 261292 CDS YP_004694789.1 339483003 10933663 complement(1670310..1670885) 1 NC_015731.1 KEGG: nit:NAL212_2353 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase 1670885 10933663 Nit79A3_1570 Nitrosomonas sp. Is79A3 N-acetylmuramoyl-L-alanine amidase YP_004694789.1 1670310 R 261292 CDS YP_004694790.1 339483004 10933664 1670958..1671584 1 NC_015731.1 TIGRFAM: Thymidylate kinase; HAMAP: Thymidylate kinase; KEGG: nit:NAL212_2352 thymidylate kinase; PFAM: Thymidylate kinase-like; thymidylate kinase 1671584 10933664 Nit79A3_1571 Nitrosomonas sp. Is79A3 thymidylate kinase YP_004694790.1 1670958 D 261292 CDS YP_004694791.1 339483005 10933665 1671577..1672617 1 NC_015731.1 TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: nit:NAL212_2351 DNA polymerase III, delta prime subunit; DNA polymerase III subunit delta' 1672617 10933665 Nit79A3_1572 Nitrosomonas sp. Is79A3 DNA polymerase III subunit delta' YP_004694791.1 1671577 D 261292 CDS YP_004694792.1 339483006 10933666 complement(1672618..1673139) 1 NC_015731.1 PFAM: Protein of unknown function DUF336; KEGG: nit:NAL212_2350 hypothetical protein; hypothetical protein 1673139 10933666 Nit79A3_1573 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694792.1 1672618 R 261292 CDS YP_004694793.1 339483007 10933667 1673223..1673936 1 NC_015731.1 PFAM: Dienelactone hydrolase; KEGG: nit:NAL212_2349 dienelactone hydrolase; dienelactone hydrolase 1673936 10933667 Nit79A3_1574 Nitrosomonas sp. Is79A3 dienelactone hydrolase YP_004694793.1 1673223 D 261292 CDS YP_004694794.1 339483008 10933668 complement(1674036..1675007) 1 NC_015731.1 PFAM: Sulphatase-modifying factor; KEGG: app:CAP2UW1_2119 hypothetical protein; sulfatase-modifying factor protein 1675007 10933668 Nit79A3_1575 Nitrosomonas sp. Is79A3 sulfatase-modifying factor protein YP_004694794.1 1674036 R 261292 CDS YP_004694795.1 339483009 10933669 complement(1674970..1675503) 1 NC_015731.1 KEGG: tkm:TK90_1685 transposase; transposase 1675503 10933669 Nit79A3_1576 Nitrosomonas sp. Is79A3 transposase YP_004694795.1 1674970 R 261292 CDS YP_004694796.1 339483010 10933670 complement(1675562..1677199) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: afe:Lferr_1749 hypothetical protein; transposase IS4 family protein 1677199 10933670 Nit79A3_1577 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694796.1 1675562 R 261292 CDS YP_004694797.1 339483011 10933671 complement(1677603..1680353) 1 NC_015731.1 PFAM: Sulphatase-modifying factor; KEGG: app:CAP2UW1_3091 hypothetical protein; sulfatase-modifying factor protein 1680353 10933671 Nit79A3_1578 Nitrosomonas sp. Is79A3 sulfatase-modifying factor protein YP_004694797.1 1677603 R 261292 CDS YP_004694798.1 339483012 10933673 complement(1681383..1682810) 1 NC_015731.1 SMART: Toll-Interleukin receptor; TIR protein 1682810 10933673 Nit79A3_1580 Nitrosomonas sp. Is79A3 TIR protein YP_004694798.1 1681383 R 261292 CDS YP_004694799.1 339483013 10933674 complement(1682876..1683211) 1 NC_015731.1 KEGG: nde:NIDE1720 antidote of proteic killer gene system; TIGRFAM: Addiction module antidote protein, HigA; PFAM: Helix-turn-helix type 3; XRE family transcriptional regulator 1683211 10933674 Nit79A3_1581 Nitrosomonas sp. Is79A3 XRE family transcriptional regulator YP_004694799.1 1682876 R 261292 CDS YP_004694800.1 339483014 10933675 complement(1683224..1683502) 1 NC_015731.1 PFAM: Plasmid maintenance system killer; KEGG: nde:NIDE1719 toxin of proteic killer gene system; plasmid maintenance system killer 1683502 10933675 Nit79A3_1582 Nitrosomonas sp. Is79A3 plasmid maintenance system killer YP_004694800.1 1683224 R 261292 CDS YP_004694801.1 339483015 10933676 complement(1683587..1684771) 1 NC_015731.1 PFAM: Alcohol dehydrogenase, iron-type; KEGG: nit:NAL212_2345 alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1684771 10933676 Nit79A3_1583 Nitrosomonas sp. Is79A3 iron-containing alcohol dehydrogenase YP_004694801.1 1683587 R 261292 CDS YP_004694802.1 339483016 10933677 complement(1684771..1685073) 1 NC_015731.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: nit:NAL212_2344 antibiotic biosynthesis monooxygenase; Antibiotic biosynthesis monooxygenase 1685073 10933677 Nit79A3_1584 Nitrosomonas sp. Is79A3 Antibiotic biosynthesis monooxygenase YP_004694802.1 1684771 R 261292 CDS YP_004694803.1 339483017 10933679 complement(1685517..1686632) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein 1686632 10933679 Nit79A3_1586 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694803.1 1685517 R 261292 CDS YP_004694804.1 339483018 10933680 complement(1686839..1687411) 1 NC_015731.1 KEGG: nmu:Nmul_A1193 transport-associated protein; PFAM: Transport-associated; SMART: Transport-associated and nodulation region, bacteria; transport-associated protein 1687411 10933680 Nit79A3_1587 Nitrosomonas sp. Is79A3 transport-associated protein YP_004694804.1 1686839 R 261292 CDS YP_004694805.1 339483019 10933681 complement(1687690..1687863) 1 NC_015731.1 PFAM: CsbD-like; KEGG: nmu:Nmul_A1602 CsbD-like; CsbD family protein 1687863 10933681 Nit79A3_1588 Nitrosomonas sp. Is79A3 CsbD family protein YP_004694805.1 1687690 R 261292 CDS YP_004694806.1 339483020 10933682 complement(1688087..1689337) 1 NC_015731.1 PFAM: Major facilitator superfamily MFS-1; KEGG: cyn:Cyan7425_4223 folate/biopterin transporter; major facilitator superfamily protein 1689337 10933682 Nit79A3_1589 Nitrosomonas sp. Is79A3 major facilitator superfamily protein YP_004694806.1 1688087 R 261292 CDS YP_004694807.1 339483021 10933683 1690442..1690867 1 NC_015731.1 TIGRFAM: RNA polymerase-binding, DksA; KEGG: nit:NAL212_1359 transcriptional regulator, TraR/DksA family; TraR/DksA family transcriptional regulator 1690867 10933683 Nit79A3_1590 Nitrosomonas sp. Is79A3 TraR/DksA family transcriptional regulator YP_004694807.1 1690442 D 261292 CDS YP_004694808.1 339483022 10933684 complement(1690927..1693047) 1 NC_015731.1 TIGRFAM: Polyribonucleotide nucleotidyltransferase; HAMAP: Polyribonucleotide nucleotidyltransferase; KEGG: nit:NAL212_1360 polyribonucleotide nucleotidyltransferase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA binding domain; polyribonucleotide nucleotidyltransferase 1693047 10933684 Nit79A3_1591 Nitrosomonas sp. Is79A3 polyribonucleotide nucleotidyltransferase YP_004694808.1 1690927 R 261292 CDS YP_004694809.1 339483023 10933685 complement(1693184..1693453) 1 NC_015731.1 KEGG: nit:NAL212_1361 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15; 30S ribosomal protein S15 1693453 10933685 Nit79A3_1592 Nitrosomonas sp. Is79A3 30S ribosomal protein S15 YP_004694809.1 1693184 R 261292 CDS YP_004694810.1 339483024 10933686 complement(1693787..1694806) 1 NC_015731.1 TIGRFAM: Phosphate binding protein; KEGG: nit:NAL212_2305 phosphate binding protein; phosphate binding protein 1694806 10933686 Nit79A3_1593 Nitrosomonas sp. Is79A3 phosphate binding protein YP_004694810.1 1693787 R 261292 CDS YP_004694811.1 339483025 10933687 complement(1695033..1696790) 1 NC_015731.1 PFAM: Phosphate-selective porin O/P; KEGG: nit:NAL212_2304 phosphate-selective porin O and P; phosphate-selective porin O and P 1696790 10933687 Nit79A3_1594 Nitrosomonas sp. Is79A3 phosphate-selective porin O and P YP_004694811.1 1695033 R 261292 CDS YP_004694812.1 339483026 10933688 1697140..1697949 1 NC_015731.1 KEGG: nit:NAL212_2606 methane monooxygenase/ammonia monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; methane monooxygenase/ammonia monooxygenase subunit C 1697949 10933688 Nit79A3_1595 Nitrosomonas sp. Is79A3 methane monooxygenase/ammonia monooxygenase subunit C YP_004694812.1 1697140 D 261292 CDS YP_004694813.1 339483027 10933689 1698105..1698542 1 NC_015731.1 KEGG: nit:NAL212_2302 hypothetical protein; hypothetical protein 1698542 10933689 Nit79A3_1596 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694813.1 1698105 D 261292 CDS YP_004694814.1 339483028 10933690 1699072..1699599 1 NC_015731.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nit:NAL212_2298 GCN5-like N-acetyltransferase; GCN5-like N-acetyltransferase 1699599 10933690 Nit79A3_1597 Nitrosomonas sp. Is79A3 GCN5-like N-acetyltransferase YP_004694814.1 1699072 D 261292 CDS YP_004694815.1 339483029 10933691 1699603..1700430 1 NC_015731.1 TIGRFAM: Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; KEGG: nit:NAL212_2297 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; Diaminopimelate epimerase 1700430 10933691 Nit79A3_1598 Nitrosomonas sp. Is79A3 Diaminopimelate epimerase YP_004694815.1 1699603 D 261292 CDS YP_004694816.1 339483030 10933692 1700448..1701149 1 NC_015731.1 PFAM: Protein of unknown function DUF484; KEGG: nit:NAL212_2296 hypothetical protein; hypothetical protein 1701149 10933692 Nit79A3_1599 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694816.1 1700448 D 261292 CDS YP_004694817.1 339483031 10933693 1701139..1702032 1 NC_015731.1 KEGG: nit:NAL212_2295 tyrosine recombinase XerC; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; Tyrosine recombinase xerC 1702032 10933693 Nit79A3_1600 Nitrosomonas sp. Is79A3 Tyrosine recombinase xerC YP_004694817.1 1701139 D 261292 CDS YP_004694818.1 339483032 10933694 1702112..1702633 1 NC_015731.1 TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; HAMAP: ATP-dependent protease hslV; KEGG: nit:NAL212_2294 ATP-dependent protease HslVU, peptidase subunit; PFAM: Proteasome, subunit alpha/beta; ATP-dependent protease hslV 1702633 10933694 Nit79A3_1601 Nitrosomonas sp. Is79A3 ATP-dependent protease hslV YP_004694818.1 1702112 D 261292 CDS YP_004694819.1 339483033 10933695 1702755..1704086 1 NC_015731.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Heat shock protein HslU; KEGG: nit:NAL212_2293 ATP-dependent hsl protease ATP-binding subunit HslU; HAMAP: ATP-dependent hsl protease ATP-binding subunit hslU; PFAM: ATPase associated with various cellular activities, AAA-2; ATP-dependent hsl protease ATP-binding subunit hslU 1704086 10933695 Nit79A3_1602 Nitrosomonas sp. Is79A3 ATP-dependent hsl protease ATP-binding subunit hslU YP_004694819.1 1702755 D 261292 CDS YP_004694820.1 339483034 10933696 complement(1704226..1704912) 1 NC_015731.1 TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; Laminin B type IV; KEGG: hbo:Hbor_38190 phosphodiesterase/alkaline phosphatase D; SMART: Laminin B; PEP motif anchor domain-containing protein 1704912 10933696 Nit79A3_1603 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004694820.1 1704226 R 261292 CDS YP_004694821.1 339483035 10933697 1705182..1705505 1 NC_015731.1 KEGG: nit:NAL212_2040 regulatory protein, FmdB family; TIGRFAM: Regulatory protein, FmdB, PFAM: Regulatory protein, FmdB; FmdB family regulatory protein 1705505 10933697 Nit79A3_1604 Nitrosomonas sp. Is79A3 FmdB family regulatory protein YP_004694821.1 1705182 D 261292 CDS YP_004694822.1 339483036 10933698 1705645..1707432 1 NC_015731.1 KEGG: nit:NAL212_2039 aspartyl-tRNA synthetase; TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain; aspartyl-tRNA synthetase 1707432 10933698 Nit79A3_1605 Nitrosomonas sp. Is79A3 aspartyl-tRNA synthetase YP_004694822.1 1705645 D 261292 CDS YP_004694823.1 339483037 10933699 1707450..1707893 1 NC_015731.1 PFAM: NUDIX hydrolase domain; KEGG: nit:NAL212_2038 NUDIX hydrolase; NUDIX hydrolase 1707893 10933699 Nit79A3_1606 Nitrosomonas sp. Is79A3 NUDIX hydrolase YP_004694823.1 1707450 D 261292 CDS YP_004694824.1 339483038 10933700 complement(1707903..1709171) 1 NC_015731.1 PFAM: Sulphate transporter; KEGG: nit:NAL212_0858 sulfate transporter; sulfate transporter 1709171 10933700 Nit79A3_1607 Nitrosomonas sp. Is79A3 sulfate transporter YP_004694824.1 1707903 R 261292 CDS YP_004694825.1 339483039 10933701 complement(1709355..1709588) 1 NC_015731.1 hypothetical protein 1709588 10933701 Nit79A3_1608 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694825.1 1709355 R 261292 CDS YP_004694826.1 339483040 10933702 complement(1709888..1710937) 1 NC_015731.1 KEGG: din:Selin_1106 hypothetical protein; hypothetical protein 1710937 10933702 Nit79A3_1609 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694826.1 1709888 R 261292 CDS YP_004694827.1 339483041 10933703 complement(1710980..1712485) 1 NC_015731.1 KEGG: nhl:Nhal_2893 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase, chain M 1712485 10933703 Nit79A3_1610 Nitrosomonas sp. Is79A3 proton-translocating NADH-quinone oxidoreductase, chain M YP_004694827.1 1710980 R 261292 CDS YP_004694828.1 339483042 10933704 complement(1712487..1714079) 1 NC_015731.1 KEGG: nhl:Nhal_2894 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase, chain M 1714079 10933704 Nit79A3_1611 Nitrosomonas sp. Is79A3 proton-translocating NADH-quinone oxidoreductase, chain M YP_004694828.1 1712487 R 261292 CDS YP_004694829.1 339483043 10933705 complement(1714087..1715655) 1 NC_015731.1 PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; KEGG: nhl:Nhal_2895 NADH/ubiquinone/plastoquinone (complex I); NADH/Ubiquinone/plastoquinone (complex I) 1715655 10933705 Nit79A3_1612 Nitrosomonas sp. Is79A3 NADH/Ubiquinone/plastoquinone (complex I) YP_004694829.1 1714087 R 261292 CDS YP_004694830.1 339483044 10933706 complement(1715657..1718932) 1 NC_015731.1 KEGG: mca:MCA0512 hypothetical protein; HAMAP: UPF0753 protein; PFAM: Protein of unknown function DUF2309; hypothetical protein 1718932 10933706 Nit79A3_1613 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694830.1 1715657 R 261292 CDS YP_004694831.1 339483045 10933707 complement(1718943..1720415) 1 NC_015731.1 KEGG: nhl:Nhal_2897 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase, chain M 1720415 10933707 Nit79A3_1614 Nitrosomonas sp. Is79A3 proton-translocating NADH-quinone oxidoreductase, chain M YP_004694831.1 1718943 R 261292 CDS YP_004694832.1 339483046 10933708 1721027..1722061 1 NC_015731.1 KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase 1722061 10933708 Nit79A3_1615 Nitrosomonas sp. Is79A3 isxo7 transposase YP_004694832.1 1721027 D 261292 CDS YP_004694833.1 339483047 10933709 complement(1722236..1722535) 1 NC_015731.1 hypothetical protein 1722535 10933709 Nit79A3_1616 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694833.1 1722236 R 261292 CDS YP_004694834.1 339483048 10933710 1722538..1723500 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 1723500 10933710 Nit79A3_1617 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694834.1 1722538 D 261292 CDS YP_004694835.1 339483049 10933711 1723751..1725061 1 NC_015731.1 PFAM: SEFIR; KEGG: cyj:Cyan7822_0499 purine or other phosphorylase 1; SEFIR domain-containing protein 1725061 10933711 Nit79A3_1618 Nitrosomonas sp. Is79A3 SEFIR domain-containing protein YP_004694835.1 1723751 D 261292 CDS YP_004694836.1 339483050 10933712 1725068..1726228 1 NC_015731.1 SMART: ATPase, AAA+ type, core; KEGG: ter:Tery_2060 ATPase-like protein; ATPase AAA 1726228 10933712 Nit79A3_1619 Nitrosomonas sp. Is79A3 ATPase AAA YP_004694836.1 1725068 D 261292 CDS YP_004694837.1 339483051 10933713 1726238..1729369 1 NC_015731.1 PFAM: Sulphatase-modifying factor; KEGG: gsu:GSU0897 hypothetical protein; sulfatase-modifying factor protein 1729369 10933713 Nit79A3_1620 Nitrosomonas sp. Is79A3 sulfatase-modifying factor protein YP_004694837.1 1726238 D 261292 CDS YP_004694838.1 339483052 10933714 1729703..1730791 1 NC_015731.1 PFAM: Sulphatase-modifying factor; KEGG: app:CAP2UW1_2883 hypothetical protein; sulfatase-modifying factor protein 1730791 10933714 Nit79A3_1621 Nitrosomonas sp. Is79A3 sulfatase-modifying factor protein YP_004694838.1 1729703 D 261292 CDS YP_004694839.1 339483053 10933715 complement(1731106..1731633) 1 NC_015731.1 KEGG: nit:NAL212_1780 hypothetical protein; hypothetical protein 1731633 10933715 Nit79A3_1622 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694839.1 1731106 R 261292 CDS YP_004694840.1 339483054 10933716 1731896..1733671 1 NC_015731.1 PFAM: Regulator of K+ conductance, C-terminal; Divalent ion symporter; KEGG: nit:NAL212_1779 citrate transporter; TrkA-C domain-containing protein 1733671 10933716 Nit79A3_1623 Nitrosomonas sp. Is79A3 TrkA-C domain-containing protein YP_004694840.1 1731896 D 261292 CDS YP_004694841.1 339483055 10933718 1736171..1737178 1 NC_015731.1 PFAM: Ribonuclease T2; KEGG: nit:NAL212_0941 ribonuclease T2; ribonuclease T2 1737178 10933718 Nit79A3_1625 Nitrosomonas sp. Is79A3 ribonuclease T2 YP_004694841.1 1736171 D 261292 CDS YP_004694842.1 339483056 10933719 complement(1737236..1738501) 1 NC_015731.1 KEGG: pfo:Pfl01_3363 Epralysin. Metallo peptidase. MEROPS family M10B; PFAM: Peptidase M10A/M12B, matrixin/adamalysin; Haemolysin-type calcium-binding region; SMART: Peptidase, metallopeptidases; peptidase M10A and M12B matrixin and adamalysin 1738501 10933719 Nit79A3_1626 Nitrosomonas sp. Is79A3 peptidase M10A and M12B matrixin and adamalysin YP_004694842.1 1737236 R 261292 CDS YP_004694843.1 339483057 10933720 1738999..1739829 1 NC_015731.1 KEGG: neu:NE2218 hypothetical protein; hypothetical protein 1739829 10933720 Nit79A3_1627 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694843.1 1738999 D 261292 CDS YP_004694844.1 339483058 10933721 1740225..1740818 1 NC_015731.1 KEGG: nit:NAL212_0896 cytochrome P460; cytochrome P460 1740818 10933721 Nit79A3_1628 Nitrosomonas sp. Is79A3 cytochrome P460 YP_004694844.1 1740225 D 261292 CDS YP_004694845.1 339483059 10933722 complement(1741020..1741793) 1 NC_015731.1 KEGG: nit:NAL212_2801 hydroxyacylglutathione hydrolase; TIGRFAM: Hydroxyacylglutathione hydrolase; HAMAP: Hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase 1741793 10933722 Nit79A3_1629 Nitrosomonas sp. Is79A3 hydroxyacylglutathione hydrolase YP_004694845.1 1741020 R 261292 CDS YP_004694846.1 339483060 10933723 1741879..1742652 1 NC_015731.1 PFAM: Methyltransferase type 11; KEGG: nit:NAL212_2800 methyltransferase type 11; type 11 methyltransferase 1742652 10933723 Nit79A3_1630 Nitrosomonas sp. Is79A3 type 11 methyltransferase YP_004694846.1 1741879 D 261292 CDS YP_004694847.1 339483061 10933724 1742663..1743127 1 NC_015731.1 KEGG: nit:NAL212_2799 ribonuclease H; HAMAP: Ribonuclease H; PFAM: Ribonuclease H; Ribonuclease H 1743127 10933724 Nit79A3_1631 Nitrosomonas sp. Is79A3 Ribonuclease H YP_004694847.1 1742663 D 261292 CDS YP_004694848.1 339483062 10933725 1743140..1743883 1 NC_015731.1 TIGRFAM: DNA polymerase 3, epsilon subunit; DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; KEGG: nit:NAL212_2798 DNA polymerase III, epsilon subunit; SMART: Exonuclease; DNA polymerase III subunit epsilon 1743883 10933725 Nit79A3_1632 Nitrosomonas sp. Is79A3 DNA polymerase III subunit epsilon YP_004694848.1 1743140 D 261292 CDS YP_004694849.1 339483063 10933726 complement(1744018..1744776) 1 NC_015731.1 PFAM: Chemotaxis phosphatase, CheZ; KEGG: nit:NAL212_2371 chemotaxis phosphatase, CheZ; chemotaxis protein CheZ 1744776 10933726 Nit79A3_1633 Nitrosomonas sp. Is79A3 chemotaxis protein CheZ YP_004694849.1 1744018 R 261292 CDS YP_004694850.1 339483064 10933727 complement(1744818..1745219) 1 NC_015731.1 KEGG: nit:NAL212_2370 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 1745219 10933727 Nit79A3_1634 Nitrosomonas sp. Is79A3 response regulator receiver protein YP_004694850.1 1744818 R 261292 CDS YP_004694851.1 339483065 10933729 complement(1745792..1746820) 1 NC_015731.1 TIGRFAM: Tetraacyldisaccharide 4'-kinase; HAMAP: Tetraacyldisaccharide 4'-kinase; KEGG: nit:NAL212_1514 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4'-kinase 1746820 10933729 Nit79A3_1636 Nitrosomonas sp. Is79A3 tetraacyldisaccharide 4'-kinase YP_004694851.1 1745792 R 261292 CDS YP_004694852.1 339483066 10933730 1747000..1747890 1 NC_015731.1 KEGG: nit:NAL212_1515 esterase/lipase/thioesterase; esterase 1747890 10933730 Nit79A3_1637 Nitrosomonas sp. Is79A3 esterase YP_004694852.1 1747000 D 261292 CDS YP_004694853.1 339483067 10933731 1748300..1749475 1 NC_015731.1 KEGG: neu:NE2353 molybdopterin/thiamine biosynthesis family protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; Rhodanese-like; SMART: Rhodanese-like; UBA/THIF-type NAD/FAD binding protein 1749475 10933731 Nit79A3_1638 Nitrosomonas sp. Is79A3 UBA/THIF-type NAD/FAD binding protein YP_004694853.1 1748300 D 261292 CDS YP_004694854.1 339483068 10933732 1749623..1750066 1 NC_015731.1 KEGG: neu:NE2352 Mov34 family protein; PFAM: Mov34/MPN/PAD-1; SMART: Mov34/MPN/PAD-1; Mov34/MPN/PAD-1 family protein 1750066 10933732 Nit79A3_1639 Nitrosomonas sp. Is79A3 Mov34/MPN/PAD-1 family protein YP_004694854.1 1749623 D 261292 CDS YP_004694855.1 339483069 10933733 1750164..1750481 1 NC_015731.1 PFAM: ThiamineS; KEGG: neu:NE2351 hypothetical protein; sulfur transfer protein ThiS 1750481 10933733 Nit79A3_1640 Nitrosomonas sp. Is79A3 sulfur transfer protein ThiS YP_004694855.1 1750164 D 261292 CDS YP_004694856.1 339483070 10933734 1750530..1752416 1 NC_015731.1 PFAM: CoA-transferase III; KEGG: neu:NE2350 L-carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F 1752416 10933734 Nit79A3_1641 Nitrosomonas sp. Is79A3 L-carnitine dehydratase/bile acid-inducible protein F YP_004694856.1 1750530 D 261292 CDS YP_004694857.1 339483071 10933735 1752413..1754095 1 NC_015731.1 PFAM: AMP-dependent synthetase/ligase; KEGG: neu:NE2349 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 1754095 10933735 Nit79A3_1642 Nitrosomonas sp. Is79A3 AMP-dependent synthetase/ligase YP_004694857.1 1752413 D 261292 CDS YP_004694858.1 339483072 10933736 1754095..1755297 1 NC_015731.1 PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal; KEGG: neu:NE2348 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 1755297 10933736 Nit79A3_1643 Nitrosomonas sp. Is79A3 acyl-CoA dehydrogenase YP_004694858.1 1754095 D 261292 CDS YP_004694859.1 339483073 10933737 1755355..1756557 1 NC_015731.1 PFAM: Major facilitator superfamily MFS-1; KEGG: neu:NE2347 general substrate transporters; major facilitator superfamily protein 1756557 10933737 Nit79A3_1644 Nitrosomonas sp. Is79A3 major facilitator superfamily protein YP_004694859.1 1755355 D 261292 CDS YP_004694860.1 339483074 10933738 complement(1756589..1757374) 1 NC_015731.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: neu:NE2346 hydrolase; alpha/beta hydrolase 1757374 10933738 Nit79A3_1645 Nitrosomonas sp. Is79A3 alpha/beta hydrolase YP_004694860.1 1756589 R 261292 CDS YP_004694861.1 339483075 10933739 complement(1757563..1758678) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein 1758678 10933739 Nit79A3_1646 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694861.1 1757563 R 261292 CDS YP_004694862.1 339483076 10933740 1758808..1760256 1 NC_015731.1 KEGG: neu:NE2345 hypothetical protein; hypothetical protein 1760256 10933740 Nit79A3_1647 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694862.1 1758808 D 261292 CDS YP_004694863.1 339483077 10933741 1760271..1761404 1 NC_015731.1 PFAM: Glycosyl hydrolase, family 88; KEGG: nmu:Nmul_A0964 unsaturated glucuronyl hydrolase; glycosyl hydrolase 88 1761404 10933741 Nit79A3_1648 Nitrosomonas sp. Is79A3 glycosyl hydrolase 88 YP_004694863.1 1760271 D 261292 CDS YP_004694864.1 339483078 10933742 1761438..1762712 1 NC_015731.1 PFAM: Amidohydrolase 1; KEGG: nmu:Nmul_A0963 amidohydrolase; amidohydrolase 1762712 10933742 Nit79A3_1649 Nitrosomonas sp. Is79A3 amidohydrolase YP_004694864.1 1761438 D 261292 CDS YP_004694865.1 339483079 10933743 1763345..1764175 1 NC_015731.1 KEGG: nit:NAL212_1278 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1764175 10933743 Nit79A3_1650 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004694865.1 1763345 D 261292 CDS YP_004694866.1 339483080 10933744 1764392..1766596 1 NC_015731.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: nit:NAL212_1277 di-heme cytochrome c peroxidase; Di-heme cytochrome c peroxidase 1766596 10933744 Nit79A3_1651 Nitrosomonas sp. Is79A3 Di-heme cytochrome c peroxidase YP_004694866.1 1764392 D 261292 CDS YP_004694867.1 339483081 10933745 1766890..1767705 1 NC_015731.1 KEGG: nmu:Nmul_A1190 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1767705 10933745 Nit79A3_1652 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004694867.1 1766890 D 261292 CDS YP_004694868.1 339483082 10933746 1768122..1769651 1 NC_015731.1 PFAM: Amidohydrolase 1; KEGG: nit:NAL212_1813 amidohydrolase; amidohydrolase 1769651 10933746 Nit79A3_1653 Nitrosomonas sp. Is79A3 amidohydrolase YP_004694868.1 1768122 D 261292 CDS YP_004694869.1 339483083 10933747 complement(1769847..1771553) 1 NC_015731.1 KEGG: nit:NAL212_1516 hypothetical protein; hypothetical protein 1771553 10933747 Nit79A3_1654 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694869.1 1769847 R 261292 CDS YP_004694870.1 339483084 10933748 complement(1771921..1772781) 1 NC_015731.1 PFAM: Radical SAM; KEGG: nit:NAL212_1517 radical SAM domain-containing protein; Radical SAM domain-containing protein 1772781 10933748 Nit79A3_1655 Nitrosomonas sp. Is79A3 Radical SAM domain-containing protein YP_004694870.1 1771921 R 261292 CDS YP_004694871.1 339483085 10933749 1772827..1773276 1 NC_015731.1 KEGG: nit:NAL212_1518 queuosine biosynthesis protein QueD; TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; queuosine biosynthesis protein QueD 1773276 10933749 Nit79A3_1656 Nitrosomonas sp. Is79A3 queuosine biosynthesis protein QueD YP_004694871.1 1772827 D 261292 CDS YP_004694872.1 339483086 10933750 1773299..1774084 1 NC_015731.1 KEGG: nit:NAL212_1519 hydrolase, TatD family; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related; TatD family hydrolase 1774084 10933750 Nit79A3_1657 Nitrosomonas sp. Is79A3 TatD family hydrolase YP_004694872.1 1773299 D 261292 CDS YP_004694873.1 339483087 10933751 1774065..1774721 1 NC_015731.1 PFAM: Ankyrin repeat; KEGG: nit:NAL212_1520 ankyrin; Ankyrin 1774721 10933751 Nit79A3_1658 Nitrosomonas sp. Is79A3 Ankyrin YP_004694873.1 1774065 D 261292 CDS YP_004694874.1 339483088 10933752 1774756..1775496 1 NC_015731.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nit:NAL212_1521 3-oxoacyl-(acyl-carrier-protein) reductase; short-chain dehydrogenase/reductase SDR 1775496 10933752 Nit79A3_1659 Nitrosomonas sp. Is79A3 short-chain dehydrogenase/reductase SDR YP_004694874.1 1774756 D 261292 CDS YP_004694875.1 339483089 10933753 1775518..1776633 1 NC_015731.1 KEGG: nit:NAL212_1522 alanine dehydrogenase; TIGRFAM: Alanine dehydrogenase/pyridine nucleotide transhydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; alanine dehydrogenase 1776633 10933753 Nit79A3_1660 Nitrosomonas sp. Is79A3 alanine dehydrogenase YP_004694875.1 1775518 D 261292 CDS YP_004694876.1 339483090 10933754 complement(1776691..1777575) 1 NC_015731.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: nit:NAL212_1337 signal transduction protein; signal transduction protein 1777575 10933754 Nit79A3_1661 Nitrosomonas sp. Is79A3 signal transduction protein YP_004694876.1 1776691 R 261292 CDS YP_004694877.1 339483091 10933756 complement(1777800..1778114) 1 NC_015731.1 TIGRFAM: Addiction module antidote protein, HigA; PFAM: Helix-turn-helix type 3; KEGG: tgr:Tgr7_1105 XRE family plasmid maintenance system antidote protein; SMART: Helix-turn-helix type 3; XRE family transcriptional regulator 1778114 10933756 Nit79A3_1663 Nitrosomonas sp. Is79A3 XRE family transcriptional regulator YP_004694877.1 1777800 R 261292 CDS YP_004694878.1 339483092 10933757 complement(1778130..1778423) 1 NC_015731.1 PFAM: Plasmid maintenance system killer; KEGG: cyj:Cyan7822_2340 plasmid maintenance system killer; plasmid maintenance system killer 1778423 10933757 Nit79A3_1664 Nitrosomonas sp. Is79A3 plasmid maintenance system killer YP_004694878.1 1778130 R 261292 CDS YP_004694879.1 339483093 10933758 complement(1778587..1779252) 1 NC_015731.1 hypothetical protein 1779252 10933758 Nit79A3_1665 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694879.1 1778587 R 261292 CDS YP_004694880.1 339483094 10933759 complement(1779366..1780232) 1 NC_015731.1 KEGG: nit:NAL212_2310 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: YicC-like, N-terminal; Domain of unknown function DUF1732; hypothetical protein 1780232 10933759 Nit79A3_1666 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694880.1 1779366 R 261292 CDS YP_004694881.1 339483095 10933760 complement(1780247..1781293) 1 NC_015731.1 KEGG: nit:NAL212_2309 hypothetical protein; hypothetical protein 1781293 10933760 Nit79A3_1667 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694881.1 1780247 R 261292 CDS YP_004694882.1 339483096 10933761 complement(1781303..1782913) 1 NC_015731.1 TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; HAMAP: Peptide chain release factor 3; KEGG: nit:NAL212_2308 peptide chain release factor 3; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; peptide chain release factor 3 1782913 10933761 Nit79A3_1668 Nitrosomonas sp. Is79A3 peptide chain release factor 3 YP_004694882.1 1781303 R 261292 CDS YP_004694883.1 339483097 10933762 complement(1782903..1784981) 1 NC_015731.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: nit:NAL212_2307 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase 1784981 10933762 Nit79A3_1669 Nitrosomonas sp. Is79A3 peptide ABC transporter ATPase YP_004694883.1 1782903 R 261292 CDS YP_004694884.1 339483098 10933763 complement(1784978..1786492) 1 NC_015731.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: nit:NAL212_2306 ABC-type transporter, integral membrane subunit; ABC transporter permease 1786492 10933763 Nit79A3_1670 Nitrosomonas sp. Is79A3 ABC transporter permease YP_004694884.1 1784978 R 261292 CDS YP_004694885.1 339483099 10933764 1787034..1787747 1 NC_015731.1 KEGG: nit:NAL212_1590 hemolysin-type calcium-binding region; hypothetical protein 1787747 10933764 Nit79A3_1671 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694885.1 1787034 D 261292 CDS YP_004694886.1 339483100 10933765 1787902..1789065 1 NC_015731.1 KEGG: nit:NAL212_2071 hypothetical protein; hypothetical protein 1789065 10933765 Nit79A3_1672 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694886.1 1787902 D 261292 CDS YP_004694887.1 339483101 10933766 complement(1789111..1789686) 1 NC_015731.1 KEGG: nit:NAL212_1924 hypothetical protein; hypothetical protein 1789686 10933766 Nit79A3_1673 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694887.1 1789111 R 261292 CDS YP_004694888.1 339483102 10933767 complement(1789779..1790318) 1 NC_015731.1 PFAM: Glutathione peroxidase; KEGG: nit:NAL212_1923 glutathione peroxidase; glutathione peroxidase 1790318 10933767 Nit79A3_1674 Nitrosomonas sp. Is79A3 glutathione peroxidase YP_004694888.1 1789779 R 261292 CDS YP_004694889.1 339483103 10933768 complement(1790390..1791649) 1 NC_015731.1 PFAM: Phosphate-selective porin O/P; KEGG: nit:NAL212_1922 phosphate-selective porin O and P; phosphate-selective porin O and P 1791649 10933768 Nit79A3_1675 Nitrosomonas sp. Is79A3 phosphate-selective porin O and P YP_004694889.1 1790390 R 261292 CDS YP_004694890.1 339483104 10933769 complement(1791849..1793048) 1 NC_015731.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: nit:NAL212_1921 hypothetical protein; hypothetical protein 1793048 10933769 Nit79A3_1676 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694890.1 1791849 R 261292 CDS YP_004694891.1 339483105 10933770 1793437..1794990 1 NC_015731.1 hypothetical protein 1794990 10933770 Nit79A3_1677 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694891.1 1793437 D 261292 CDS YP_004694892.1 339483106 10933771 1795081..1796406 1 NC_015731.1 KEGG: Extracellular ligand-binding receptor; hypothetical protein 1796406 10933771 Nit79A3_1678 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694892.1 1795081 D 261292 CDS YP_004694893.1 339483107 10933772 complement(1796582..1797565) 1 NC_015731.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: nit:NAL212_0168 endonuclease/exonuclease/phosphatase; hypothetical protein 1797565 10933772 Nit79A3_1679 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694893.1 1796582 R 261292 CDS YP_004694894.1 339483108 10933773 1797947..1798144 1 NC_015731.1 KEGG: nit:NAL212_1957 hypothetical protein; hypothetical protein 1798144 10933773 Nit79A3_1680 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694894.1 1797947 D 261292 CDS YP_004694895.1 339483109 10933774 complement(1798165..1799367) 1 NC_015731.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: nit:NAL212_1955 hypothetical protein; hypothetical protein 1799367 10933774 Nit79A3_1681 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694895.1 1798165 R 261292 CDS YP_004694896.1 339483110 10933775 complement(1799354..1800037) 1 NC_015731.1 KEGG: nit:NAL212_1954 phosphonate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 1800037 10933775 Nit79A3_1682 Nitrosomonas sp. Is79A3 ABC transporter YP_004694896.1 1799354 R 261292 CDS YP_004694897.1 339483111 10933776 complement(1800034..1801185) 1 NC_015731.1 KEGG: nit:NAL212_1953 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1801185 10933776 Nit79A3_1683 Nitrosomonas sp. Is79A3 RND family efflux transporter MFP subunit YP_004694897.1 1800034 R 261292 CDS YP_004694898.1 339483112 10933777 1801317..1802951 1 NC_015731.1 KEGG: nit:NAL212_1952 DNA mismatch repair protein MutS domain-containing protein; PFAM: DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS domain-containing protein 1802951 10933777 Nit79A3_1684 Nitrosomonas sp. Is79A3 DNA mismatch repair protein MutS domain-containing protein YP_004694898.1 1801317 D 261292 CDS YP_004694899.1 339483113 10933778 1802948..1803178 1 NC_015731.1 KEGG: gpb:HDN1F_31430 hypothetical protein; hypothetical protein 1803178 10933778 Nit79A3_1685 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694899.1 1802948 D 261292 CDS YP_004694900.1 339483114 10933779 1803337..1804101 1 NC_015731.1 KEGG: dat:HRM2_03850 ferric uptake regulation protein; ferric uptake regulation protein 1804101 10933779 Nit79A3_1686 Nitrosomonas sp. Is79A3 ferric uptake regulation protein YP_004694900.1 1803337 D 261292 CDS YP_004694901.1 339483115 10933780 1804253..1805428 1 NC_015731.1 TIGRFAM: Succinyl-CoA synthetase, beta subunit; HAMAP: Succinyl-CoA ligase [ADP-forming] subunit beta; KEGG: nit:NAL212_1323 succinyl-CoA synthetase, beta subunit; PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; Succinyl-CoA ligase (ADP-forming) subunit beta 1805428 10933780 Nit79A3_1687 Nitrosomonas sp. Is79A3 Succinyl-CoA ligase (ADP-forming) subunit beta YP_004694901.1 1804253 D 261292 CDS YP_004694902.1 339483116 10933781 1805463..1806338 1 NC_015731.1 KEGG: nit:NAL212_1322 succinyl-CoA synthetase, alpha subunit; TIGRFAM: Succinyl-CoA ligase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding; succinyl-CoA synthetase subunit alpha 1806338 10933781 Nit79A3_1688 Nitrosomonas sp. Is79A3 succinyl-CoA synthetase subunit alpha YP_004694902.1 1805463 D 261292 CDS YP_004694903.1 339483117 10933782 1806374..1806682 1 NC_015731.1 KEGG: nit:NAL212_1321 hypothetical protein; hypothetical protein 1806682 10933782 Nit79A3_1689 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694903.1 1806374 D 261292 CDS YP_004694904.1 339483118 10933783 1806705..1808147 1 NC_015731.1 KEGG: nit:NAL212_1320 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 1808147 10933783 Nit79A3_1690 Nitrosomonas sp. Is79A3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_004694904.1 1806705 D 261292 CDS YP_004694905.1 339483119 10933784 1808416..1809006 1 NC_015731.1 PFAM: Cystathionine beta-synthase, core; KEGG: nit:NAL212_1319 CBS domain containing protein; CBS domain containing protein 1809006 10933784 Nit79A3_1691 Nitrosomonas sp. Is79A3 CBS domain containing protein YP_004694905.1 1808416 D 261292 CDS YP_004694906.1 339483120 10933786 complement(1809415..1810449) 1 NC_015731.1 KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase 1810449 10933786 Nit79A3_1693 Nitrosomonas sp. Is79A3 isxo7 transposase YP_004694906.1 1809415 R 261292 CDS YP_004694907.1 339483121 10933787 1810898..1813972 1 NC_015731.1 PFAM: Patatin; KEGG: sus:Acid_6439 hypothetical protein; Patatin 1813972 10933787 Nit79A3_1694 Nitrosomonas sp. Is79A3 Patatin YP_004694907.1 1810898 D 261292 CDS YP_004694908.1 339483122 10933788 complement(1814021..1815493) 1 NC_015731.1 KEGG: nit:NAL212_0544 anthranilate synthase component I; TIGRFAM: Anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; anthranilate synthase component I 1815493 10933788 Nit79A3_1695 Nitrosomonas sp. Is79A3 anthranilate synthase component I YP_004694908.1 1814021 R 261292 CDS YP_004694909.1 339483123 10933789 complement(1815503..1816231) 1 NC_015731.1 KEGG: nit:NAL212_0545 phosphoglycolate phosphatase; TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; phosphoglycolate phosphatase 1816231 10933789 Nit79A3_1696 Nitrosomonas sp. Is79A3 phosphoglycolate phosphatase YP_004694909.1 1815503 R 261292 CDS YP_004694910.1 339483124 10933790 complement(1816277..1816954) 1 NC_015731.1 KEGG: nit:NAL212_0546 ribulose-phosphate 3-epimerase; TIGRFAM: Ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 1816954 10933790 Nit79A3_1697 Nitrosomonas sp. Is79A3 ribulose-phosphate 3-epimerase YP_004694910.1 1816277 R 261292 CDS YP_004694911.1 339483125 10933791 1817099..1817485 1 NC_015731.1 KEGG: nit:NAL212_0549 ApaG domain-containing protein; HAMAP: Protein ApaG; PFAM: ApaG; Protein ApaG 1817485 10933791 Nit79A3_1698 Nitrosomonas sp. Is79A3 Protein ApaG YP_004694911.1 1817099 D 261292 CDS YP_004694912.1 339483126 10933792 1817545..1818249 1 NC_015731.1 PFAM: Tetrapyrrole methylase; KEGG: nit:NAL212_0550 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 1818249 10933792 Nit79A3_1699 Nitrosomonas sp. Is79A3 uroporphyrin-III C/tetrapyrrole methyltransferase YP_004694912.1 1817545 D 261292 CDS YP_004694913.1 339483127 10933793 complement(1818299..1818688) 1 NC_015731.1 KEGG: nit:NAL212_0551 lactoylglutathione lyase; TIGRFAM: Glyoxalase I; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase 1818688 10933793 Nit79A3_1700 Nitrosomonas sp. Is79A3 lactoylglutathione lyase YP_004694913.1 1818299 R 261292 CDS YP_004694914.1 339483128 10933794 complement(1818689..1818877) 1 NC_015731.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: nit:NAL212_0552 rubredoxin-type Fe(Cys)4 protein; Rubredoxin-type Fe(Cys)4 protein 1818877 10933794 Nit79A3_1701 Nitrosomonas sp. Is79A3 Rubredoxin-type Fe(Cys)4 protein YP_004694914.1 1818689 R 261292 CDS YP_004694915.1 339483129 10933795 1818930..1819805 1 NC_015731.1 PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: nit:NAL212_0553 phosphomethylpyrimidine kinase; Phosphomethylpyrimidine kinase type-1 1819805 10933795 Nit79A3_1702 Nitrosomonas sp. Is79A3 Phosphomethylpyrimidine kinase type-1 YP_004694915.1 1818930 D 261292 CDS YP_004694916.1 339483130 10933796 1819786..1820418 1 NC_015731.1 TIGRFAM: Thiamine monophosphate synthase; HAMAP: Thiamine-phosphate pyrophosphorylase; KEGG: nit:NAL212_0554 thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase; Thiamine-phosphate pyrophosphorylase 1820418 10933796 Nit79A3_1703 Nitrosomonas sp. Is79A3 Thiamine-phosphate pyrophosphorylase YP_004694916.1 1819786 D 261292 CDS YP_004694917.1 339483131 10933797 1820467..1821747 1 NC_015731.1 TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; HAMAP: Glutamate-1-semialdehyde 2,1-aminomutase; KEGG: nit:NAL212_0555 glutamate-1-semialdehyde-2,1-aminomutase; PFAM: Aminotransferase class-III; Glutamate-1-semialdehyde 2,1-aminomutase 1821747 10933797 Nit79A3_1704 Nitrosomonas sp. Is79A3 Glutamate-1-semialdehyde 2,1-aminomutase YP_004694917.1 1820467 D 261292 CDS YP_004694918.1 339483132 10933798 complement(1821829..1822473) 1 NC_015731.1 PFAM: Cytochrome c, class I; KEGG: nit:NAL212_0556 cytochrome c class I; cytochrome c class I 1822473 10933798 Nit79A3_1705 Nitrosomonas sp. Is79A3 cytochrome c class I YP_004694918.1 1821829 R 261292 CDS YP_004694919.1 339483133 10933799 1822607..1823203 1 NC_015731.1 KEGG: nit:NAL212_0557 sporulation domain-containing protein; sporulation domain-containing protein 1823203 10933799 Nit79A3_1706 Nitrosomonas sp. Is79A3 sporulation domain-containing protein YP_004694919.1 1822607 D 261292 CDS YP_004694920.1 339483134 10933800 1823302..1824108 1 NC_015731.1 KEGG: nit:NAL212_0558 methionine aminopeptidase, type I; TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; PFAM: Peptidase M24, structural domain; methionine aminopeptidase, type I 1824108 10933800 Nit79A3_1707 Nitrosomonas sp. Is79A3 methionine aminopeptidase, type I YP_004694920.1 1823302 D 261292 CDS YP_004694921.1 339483135 10933801 1824136..1824873 1 NC_015731.1 TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: nit:NAL212_0559 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Ribonuclease PH 1824873 10933801 Nit79A3_1708 Nitrosomonas sp. Is79A3 Ribonuclease PH YP_004694921.1 1824136 D 261292 CDS YP_004694922.1 339483136 10933802 1824866..1825468 1 NC_015731.1 TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase rdgB; KEGG: nit:NAL212_0560 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; PFAM: Ham1-like protein; Nucleoside-triphosphatase rdgB 1825468 10933802 Nit79A3_1709 Nitrosomonas sp. Is79A3 Nucleoside-triphosphatase rdgB YP_004694922.1 1824866 D 261292 CDS YP_004694923.1 339483137 10933803 1825869..1826102 1 NC_015731.1 KEGG: nit:NAL212_0958 RNA recognition motif domain containing protein; hypothetical protein 1826102 10933803 Nit79A3_1710 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694923.1 1825869 D 261292 CDS YP_004694924.1 339483138 10933804 1826215..1826322 1 NC_015731.1 hypothetical protein 1826322 10933804 Nit79A3_1711 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694924.1 1826215 D 261292 CDS YP_004694925.1 339483139 10933805 1826462..1826749 1 NC_015731.1 hypothetical protein 1826749 10933805 Nit79A3_1712 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694925.1 1826462 D 261292 CDS YP_004694926.1 339483140 10933806 complement(1827123..1827965) 1 NC_015731.1 manually curated; TIGRFAM: S-formylglutathione hydrolase; KEGG: nit:NAL212_0567 S-formylglutathione hydrolase; PFAM: esterase; S-formylglutathione hydrolase 1827965 10933806 Nit79A3_1713 Nitrosomonas sp. Is79A3 S-formylglutathione hydrolase YP_004694926.1 1827123 R 261292 CDS YP_004694927.1 339483141 10933807 complement(1827968..1829074) 1 NC_015731.1 KEGG: nit:NAL212_0568 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 1829074 10933807 Nit79A3_1714 Nitrosomonas sp. Is79A3 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase YP_004694927.1 1827968 R 261292 CDS YP_004694928.1 339483142 10933808 complement(1829074..1829574) 1 NC_015731.1 KEGG: nit:NAL212_0569 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase 1829574 10933808 Nit79A3_1715 Nitrosomonas sp. Is79A3 protein tyrosine phosphatase YP_004694928.1 1829074 R 261292 CDS YP_004694929.1 339483143 10933809 1830033..1830350 1 NC_015731.1 KEGG: nit:NAL212_1778 hypothetical protein; hypothetical protein 1830350 10933809 Nit79A3_1716 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694929.1 1830033 D 261292 CDS YP_004694930.1 339483144 10933810 complement(1830491..1830970) 1 NC_015731.1 PFAM: YkuD domain; KEGG: nit:NAL212_0409 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 1830970 10933810 Nit79A3_1717 Nitrosomonas sp. Is79A3 ErfK/YbiS/YcfS/YnhG family protein YP_004694930.1 1830491 R 261292 CDS YP_004694931.1 339483145 10933811 complement(1830960..1831451) 1 NC_015731.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: nit:NAL212_0408 CMP/dCMP deaminase zinc-binding protein; CMP/dCMP deaminase zinc-binding protein 1831451 10933811 Nit79A3_1718 Nitrosomonas sp. Is79A3 CMP/dCMP deaminase zinc-binding protein YP_004694931.1 1830960 R 261292 CDS YP_004694932.1 339483146 10933812 1831607..1832506 1 NC_015731.1 KEGG: nit:NAL212_0407 protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific; TIGRFAM: Ribosomal protein L3-specific, glutamine-N5-methyltransferase; Modification methylase HemK; PFAM: Methyltransferase small; protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific 1832506 10933812 Nit79A3_1719 Nitrosomonas sp. Is79A3 protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific YP_004694932.1 1831607 D 261292 CDS YP_004694933.1 339483147 10933813 1832638..1832895 1 NC_015731.1 KEGG: nit:NAL212_0566 hypothetical protein; hypothetical protein 1832895 10933813 Nit79A3_1720 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694933.1 1832638 D 261292 CDS YP_004694934.1 339483148 10933814 1832892..1833116 1 NC_015731.1 KEGG: nit:NAL212_0565 hypothetical protein; hypothetical protein 1833116 10933814 Nit79A3_1721 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694934.1 1832892 D 261292 CDS YP_004694935.1 339483149 10933815 1833147..1833833 1 NC_015731.1 KEGG: rcu:RCOM_0354920 hypothetical protein; hypothetical protein 1833833 10933815 Nit79A3_1722 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694935.1 1833147 D 261292 CDS YP_004694936.1 339483150 10933816 complement(1834024..1834863) 1 NC_015731.1 TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: nit:NAL212_1615 pseudouridine synthase Rsu; SMART: RNA-binding S4; pseudouridine synthase 1834863 10933816 Nit79A3_1723 Nitrosomonas sp. Is79A3 pseudouridine synthase YP_004694936.1 1834024 R 261292 CDS YP_004694937.1 339483151 10933817 complement(1835080..1840581) 1 NC_015731.1 KEGG: nit:NAL212_1616 hemolysin-type calcium-binding region; Hemolysin-type calcium-binding protein 1840581 10933817 Nit79A3_1724 Nitrosomonas sp. Is79A3 Hemolysin-type calcium-binding protein YP_004694937.1 1835080 R 261292 CDS YP_004694938.1 339483152 10933818 complement(1840719..1841042) 1 NC_015731.1 TIGRFAM: Uncharacterised protein family UPF0133; HAMAP: Uncharacterised protein family UPF0133; KEGG: nit:NAL212_1617 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; hypothetical protein 1841042 10933818 Nit79A3_1725 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694938.1 1840719 R 261292 CDS YP_004694939.1 339483153 10933819 complement(1841057..1842661) 1 NC_015731.1 TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: ATPase, AAA-type, core; KEGG: nit:NAL212_1618 DNA polymerase III, subunits gamma and tau; SMART: ATPase, AAA+ type, core; DNA polymerase III subunits gamma and tau 1842661 10933819 Nit79A3_1726 Nitrosomonas sp. Is79A3 DNA polymerase III subunits gamma and tau YP_004694939.1 1841057 R 261292 CDS YP_004694940.1 339483154 10933821 1842976..1844133 1 NC_015731.1 KEGG: nmu:Nmul_A1663 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 1844133 10933821 Nit79A3_1727 Nitrosomonas sp. Is79A3 metal dependent phosphohydrolase YP_004694940.1 1842976 D 261292 CDS YP_004694941.1 339483155 10933822 1844231..1845685 1 NC_015731.1 TIGRFAM: RecB family nuclease, TM0106, KEGG: nit:NAL212_1619 RecB family nuclease; RecB family nuclease 1845685 10933822 Nit79A3_1728 Nitrosomonas sp. Is79A3 RecB family nuclease YP_004694941.1 1844231 D 261292 CDS YP_004694942.1 339483156 10933823 complement(1845729..1847168) 1 NC_015731.1 KEGG: nit:NAL212_1620 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; Nucleotidyl transferase; mannose-1-phosphate guanylyltransferase 1847168 10933823 Nit79A3_1729 Nitrosomonas sp. Is79A3 mannose-1-phosphate guanylyltransferase YP_004694942.1 1845729 R 261292 CDS YP_004694943.1 339483157 10933824 1847595..1848857 1 NC_015731.1 KEGG: nit:NAL212_0828 hypothetical protein; hypothetical protein 1848857 10933824 Nit79A3_1730 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694943.1 1847595 D 261292 CDS YP_004694944.1 339483158 10933825 1849035..1850264 1 NC_015731.1 hypothetical protein 1850264 10933825 Nit79A3_1731 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694944.1 1849035 D 261292 CDS YP_004694945.1 339483159 10933826 complement(1850160..1850387) 1 NC_015731.1 hypothetical protein 1850387 10933826 Nit79A3_1732 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694945.1 1850160 R 261292 CDS YP_004694946.1 339483160 10933827 complement(1850457..1852262) 1 NC_015731.1 KEGG: nit:NAL212_1406 hypothetical protein; hypothetical protein 1852262 10933827 Nit79A3_1733 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694946.1 1850457 R 261292 CDS YP_004694947.1 339483161 10933828 1852393..1853790 1 NC_015731.1 PFAM: DNA-repair protein, UmuC-like; KEGG: nit:NAL212_2528 DNA-directed DNA polymerase; UMUC domain-containing protein DNA-repair protein 1853790 10933828 Nit79A3_1734 Nitrosomonas sp. Is79A3 UMUC domain-containing protein DNA-repair protein YP_004694947.1 1852393 D 261292 CDS YP_004694948.1 339483162 10933829 1853855..1855219 1 NC_015731.1 PFAM: Aldehyde dehydrogenase; KEGG: nit:NAL212_2796 succinate-semialdehyde dehydrogenase (NAD(P)(+)); aldehyde dehydrogenase 1855219 10933829 Nit79A3_1735 Nitrosomonas sp. Is79A3 aldehyde dehydrogenase YP_004694948.1 1853855 D 261292 CDS YP_004694949.1 339483163 10933830 1855308..1856324 1 NC_015731.1 PFAM: Sulphatase-modifying factor; KEGG: mms:mma_1908 hypothetical protein; sulfatase-modifying factor protein 1856324 10933830 Nit79A3_1736 Nitrosomonas sp. Is79A3 sulfatase-modifying factor protein YP_004694949.1 1855308 D 261292 CDS YP_004694950.1 339483164 10933831 complement(1856504..1856956) 1 NC_015731.1 PFAM: Chromate resistance exported protein; KEGG: pop:POPTR_946650 hypothetical protein; Chromate resistance exported protein 1856956 10933831 Nit79A3_1737 Nitrosomonas sp. Is79A3 Chromate resistance exported protein YP_004694950.1 1856504 R 261292 CDS YP_004694951.1 339483165 10933832 complement(1856965..1858329) 1 NC_015731.1 KEGG: dar:Daro_3555 chromate transporter; TIGRFAM: Chromate transporter; PFAM: Chromate transporter region; chromate transporter 1858329 10933832 Nit79A3_1738 Nitrosomonas sp. Is79A3 chromate transporter YP_004694951.1 1856965 R 261292 CDS YP_004694952.1 339483166 10933833 complement(1858329..1859267) 1 NC_015731.1 PFAM: Chromate resistance exported protein; KEGG: rfr:Rfer_2446 chromate resistance exported protein; Chromate resistance exported protein 1859267 10933833 Nit79A3_1739 Nitrosomonas sp. Is79A3 Chromate resistance exported protein YP_004694952.1 1858329 R 261292 CDS YP_004694953.1 339483167 10933834 1859450..1860058 1 NC_015731.1 PFAM: NADH:ubiquinone oxidoreductase intermediate-associated protein 30; KEGG: gca:Galf_1674 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 1860058 10933834 Nit79A3_1740 Nitrosomonas sp. Is79A3 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 YP_004694953.1 1859450 D 261292 CDS YP_004694954.1 339483168 10933835 complement(1860106..1861836) 1 NC_015731.1 PFAM: Dak kinase; Dak phosphatase; KEGG: nit:NAL212_1378 glycerone kinase; Dak kinase 1861836 10933835 Nit79A3_1741 Nitrosomonas sp. Is79A3 Dak kinase YP_004694954.1 1860106 R 261292 CDS YP_004694955.1 339483169 10933836 complement(1861948..1863165) 1 NC_015731.1 PFAM: Metallophosphoesterase; metallophosphoesterase 1863165 10933836 Nit79A3_1742 Nitrosomonas sp. Is79A3 metallophosphoesterase YP_004694955.1 1861948 R 261292 CDS YP_004694956.1 339483170 10933839 complement(1864225..1865619) 1 NC_015731.1 KEGG: nit:NAL212_0934 glutamyl-tRNA synthetase; TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl-tRNA synthetase 1865619 10933839 Nit79A3_1743 Nitrosomonas sp. Is79A3 glutamyl-tRNA synthetase YP_004694956.1 1864225 R 261292 CDS YP_004694957.1 339483171 10933840 1865817..1867403 1 NC_015731.1 KEGG: nit:NAL212_0935 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated; TIGRFAM: Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated; PFAM: AMP-dependent synthetase/ligase; acyl-CoA ligase 1867403 10933840 Nit79A3_1744 Nitrosomonas sp. Is79A3 acyl-CoA ligase YP_004694957.1 1865817 D 261292 CDS YP_004694958.1 339483172 10933841 1867400..1868635 1 NC_015731.1 KEGG: nit:NAL212_0936 pyridoxal-dependent decarboxylase, exosortase system type 1 associated; TIGRFAM: Pyridoxal-dependent decarboxylase, exosortase system type 1 associated; PFAM: Orn/DAP/Arg decarboxylase 2; pyridoxal-dependent decarboxylase, exosortase system type 1 associated 1868635 10933841 Nit79A3_1745 Nitrosomonas sp. Is79A3 pyridoxal-dependent decarboxylase, exosortase system type 1 associated YP_004694958.1 1867400 D 261292 CDS YP_004694959.1 339483173 10933842 1869076..1869846 1 NC_015731.1 TIGRFAM: PEP-CTERM/exosortase system-associated acyltransferase; KEGG: nit:NAL212_0937 PEP-Cterm/exosortase system-associated acyltransferase; PEP-CTERM/exosortase system-associated acyltransferase 1869846 10933842 Nit79A3_1746 Nitrosomonas sp. Is79A3 PEP-CTERM/exosortase system-associated acyltransferase YP_004694959.1 1869076 D 261292 CDS YP_004694960.1 339483174 10933843 1869915..1870361 1 NC_015731.1 KEGG: nit:NAL212_0938 hypothetical protein; hypothetical protein 1870361 10933843 Nit79A3_1747 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694960.1 1869915 D 261292 CDS YP_004694961.1 339483175 10933844 1870384..1871739 1 NC_015731.1 KEGG: nit:NAL212_0939 hypothetical protein; hypothetical protein 1871739 10933844 Nit79A3_1748 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694961.1 1870384 D 261292 CDS YP_004694962.1 339483176 10933845 1871756..1874668 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: nit:NAL212_0940 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1874668 10933845 Nit79A3_1749 Nitrosomonas sp. Is79A3 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004694962.1 1871756 D 261292 CDS YP_004694963.1 339483177 10933846 complement(1874866..1876263) 1 NC_015731.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: nit:NAL212_1874 beta-Casp domain; RNA-metabolising metallo-beta-lactamase 1876263 10933846 Nit79A3_1750 Nitrosomonas sp. Is79A3 RNA-metabolising metallo-beta-lactamase YP_004694963.1 1874866 R 261292 CDS YP_004694964.1 339483178 10933847 complement(1876287..1877654) 1 NC_015731.1 KEGG: nit:NAL212_1873 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1877654 10933847 Nit79A3_1751 Nitrosomonas sp. Is79A3 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_004694964.1 1876287 R 261292 CDS YP_004694965.1 339483179 10933848 1877791..1879131 1 NC_015731.1 KEGG: nit:NAL212_1872 hypothetical protein; hypothetical protein 1879131 10933848 Nit79A3_1752 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694965.1 1877791 D 261292 CDS YP_004694966.1 339483180 10933849 1879397..1880773 1 NC_015731.1 KEGG: nit:NAL212_1279 adenylosuccinate lyase; TIGRFAM: Adenylosuccinate lyase; PFAM: Adenylosuccinate lyase C-terminal; Fumarate lyase; adenylosuccinate lyase 1880773 10933849 Nit79A3_1753 Nitrosomonas sp. Is79A3 adenylosuccinate lyase YP_004694966.1 1879397 D 261292 CDS YP_004694967.1 339483181 10933850 1880913..1881506 1 NC_015731.1 KEGG: nit:NAL212_1280 GrpE protein; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor; Protein grpE 1881506 10933850 Nit79A3_1754 Nitrosomonas sp. Is79A3 Protein grpE YP_004694967.1 1880913 D 261292 CDS YP_004694968.1 339483182 10933851 1881574..1883508 1 NC_015731.1 TIGRFAM: Chaperone DnaK; HAMAP: Chaperone DnaK; KEGG: nit:NAL212_1281 chaperone protein DnaK; PFAM: Heat shock protein 70; molecular chaperone DnaK 1883508 10933851 Nit79A3_1755 Nitrosomonas sp. Is79A3 molecular chaperone DnaK YP_004694968.1 1881574 D 261292 CDS YP_004694969.1 339483183 10933852 1883656..1884768 1 NC_015731.1 SMART: Heat shock protein DnaJ, N-terminal; TIGRFAM: Chaperone DnaJ; KEGG: nit:NAL212_1282 chaperone protein DnaJ; HAMAP: Chaperone protein dnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, cysteine-rich region; Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 1884768 10933852 Nit79A3_1756 Nitrosomonas sp. Is79A3 molecular chaperone DnaJ YP_004694969.1 1883656 D 261292 CDS YP_004694970.1 339483184 10933853 1885125..1886534 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 1886534 10933853 Nit79A3_1757 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694970.1 1885125 D 261292 CDS YP_004694971.1 339483185 10933856 1888863..1889366 1 NC_015731.1 KEGG: afe:Lferr_0146 hypothetical protein; hypothetical protein 1889366 10933856 Nit79A3_1761 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694971.1 1888863 D 261292 CDS YP_004694972.1 339483186 10933857 1889339..1889923 1 NC_015731.1 KEGG: afe:Lferr_0145 transposase; hypothetical protein 1889923 10933857 Nit79A3_1762 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694972.1 1889339 D 261292 CDS YP_004694973.1 339483187 10933858 complement(1890187..1890480) 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: gca:Galf_0832 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1890480 10933858 Nit79A3_1763 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004694973.1 1890187 R 261292 CDS YP_004694974.1 339483188 10933859 complement(1890503..1891396) 1 NC_015731.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; KEGG: afr:AFE_3183 ISAfe1, transposase; transposase IS116/IS110/IS902 family protein 1891396 10933859 Nit79A3_1764 Nitrosomonas sp. Is79A3 transposase IS116/IS110/IS902 family protein YP_004694974.1 1890503 R 261292 CDS YP_004694975.1 339483189 10933860 1892065..1892604 1 NC_015731.1 hypothetical protein 1892604 10933860 Nit79A3_1765 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694975.1 1892065 D 261292 CDS YP_004694976.1 339483190 10933861 complement(1892578..1893996) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 1893996 10933861 Nit79A3_1766 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694976.1 1892578 R 261292 CDS YP_004694977.1 339483191 10933862 1894481..1894735 1 NC_015731.1 hypothetical protein 1894735 10933862 Nit79A3_1767 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694977.1 1894481 D 261292 CDS YP_004694978.1 339483192 10933863 complement(1894741..1895169) 1 NC_015731.1 KEGG: nit:NAL212_1665 hypothetical protein; hypothetical protein 1895169 10933863 Nit79A3_1768 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694978.1 1894741 R 261292 CDS YP_004694979.1 339483193 10933864 complement(1895858..1896424) 1 NC_015731.1 hypothetical protein 1896424 10933864 Nit79A3_1769 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694979.1 1895858 R 261292 CDS YP_004694980.1 339483194 10933865 complement(1896469..1898007) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 1898007 10933865 Nit79A3_1770 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004694980.1 1896469 R 261292 CDS YP_004694981.1 339483195 10933866 complement(1898141..1899253) 1 NC_015731.1 KEGG: nit:NAL212_2316 magnesium and cobalt transport protein CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; magnesium and cobalt transport protein CorA 1899253 10933866 Nit79A3_1771 Nitrosomonas sp. Is79A3 magnesium and cobalt transport protein CorA YP_004694981.1 1898141 R 261292 CDS YP_004694982.1 339483196 10933867 complement(1899407..1899604) 1 NC_015731.1 KEGG: nit:NAL212_2315 hypothetical protein; hypothetical protein 1899604 10933867 Nit79A3_1772 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694982.1 1899407 R 261292 CDS YP_004694983.1 339483197 10933868 1899804..1900382 1 NC_015731.1 KEGG: nit:NAL212_2314 hypothetical protein; hypothetical protein 1900382 10933868 Nit79A3_1773 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694983.1 1899804 D 261292 CDS YP_004694984.1 339483198 10933869 complement(1900726..1901619) 1 NC_015731.1 KEGG: nit:NAL212_1830 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase 1901619 10933869 Nit79A3_1774 Nitrosomonas sp. Is79A3 UTP-glucose-1-phosphate uridylyltransferase YP_004694984.1 1900726 R 261292 CDS YP_004694985.1 339483199 10933870 complement(1901698..1902723) 1 NC_015731.1 KEGG: nit:NAL212_1831 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 1902723 10933870 Nit79A3_1775 Nitrosomonas sp. Is79A3 UDP-glucose 4-epimerase YP_004694985.1 1901698 R 261292 CDS YP_004694986.1 339483200 10933871 complement(1902799..1903755) 1 NC_015731.1 KEGG: nit:NAL212_1832 hypothetical protein; hypothetical protein 1903755 10933871 Nit79A3_1776 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694986.1 1902799 R 261292 CDS YP_004694987.1 339483201 10933872 complement(1903828..1905738) 1 NC_015731.1 PFAM: Adenylylsulphate kinase, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; TIGRFAM: Sulphate adenylyltransferase, large subunit; Adenylylsulphate kinase, C-terminal; HAMAP: Sulfate adenylyltransferase subunit 1; KEGG: nit:NAL212_1833 sulfate adenylyltransferase, large subunit; Sulfate adenylyltransferase subunit 1 1905738 10933872 Nit79A3_1777 Nitrosomonas sp. Is79A3 Sulfate adenylyltransferase subunit 1 YP_004694987.1 1903828 R 261292 CDS YP_004694988.1 339483202 10933873 complement(1905738..1906634) 1 NC_015731.1 TIGRFAM: Sulphate adenylyltransferase, small subunit; HAMAP: Sulfate adenylyltransferase subunit 2; KEGG: nit:NAL212_1834 sulfate adenylyltransferase, small subunit; PFAM: Phosphoadenosine phosphosulphate reductase; Sulfate adenylyltransferase subunit 2 1906634 10933873 Nit79A3_1778 Nitrosomonas sp. Is79A3 Sulfate adenylyltransferase subunit 2 YP_004694988.1 1905738 R 261292 CDS YP_004694989.1 339483203 10933876 complement(1908118..1909248) 1 NC_015731.1 KEGG: hoh:Hoch_1738 hypothetical protein; hypothetical protein 1909248 10933876 Nit79A3_1780 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694989.1 1908118 R 261292 CDS YP_004694990.1 339483204 10933877 1909982..1910587 1 NC_015731.1 KEGG: nmu:Nmul_A1259 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1910587 10933877 Nit79A3_1781 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004694990.1 1909982 D 261292 CDS YP_004694991.1 339483205 10933878 1911010..1912071 1 NC_015731.1 KEGG: nit:NAL212_0962 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1912071 10933878 Nit79A3_1782 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004694991.1 1911010 D 261292 CDS YP_004694992.1 339483206 10933879 complement(1912525..1913292) 1 NC_015731.1 KEGG: nit:NAL212_1086 hypothetical protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal; hypothetical protein 1913292 10933879 Nit79A3_1783 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694992.1 1912525 R 261292 CDS YP_004694993.1 339483207 10933880 complement(1913298..1913675) 1 NC_015731.1 KEGG: nit:NAL212_1085 hypothetical protein; hypothetical protein 1913675 10933880 Nit79A3_1784 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694993.1 1913298 R 261292 CDS YP_004694994.1 339483208 10933881 complement(1913690..1915798) 1 NC_015731.1 TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; HAMAP: Methionyl-tRNA synthetase; KEGG: nit:NAL212_1084 methionyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding region; Methionyl-tRNA synthetase 1915798 10933881 Nit79A3_1785 Nitrosomonas sp. Is79A3 Methionyl-tRNA synthetase YP_004694994.1 1913690 R 261292 CDS YP_004694995.1 339483209 10933882 1915922..1917010 1 NC_015731.1 PFAM: ATPase-like, ParA/MinD; Protein of unknown function DUF59; KEGG: nit:NAL212_1083 ATPase-like, ParA/MinD; chromosome partitioning protein ParA 1917010 10933882 Nit79A3_1786 Nitrosomonas sp. Is79A3 chromosome partitioning protein ParA YP_004694995.1 1915922 D 261292 CDS YP_004694996.1 339483210 10933883 1917024..1917590 1 NC_015731.1 manually curated; TIGRFAM: Deoxycytidine triphosphate deaminase; KEGG: nit:NAL212_1082 deoxycytidine triphosphate deaminase; HAMAP: Deoxycytidine triphosphate deaminase; Deoxycytidine triphosphate deaminase 1917590 10933883 Nit79A3_1787 Nitrosomonas sp. Is79A3 Deoxycytidine triphosphate deaminase YP_004694996.1 1917024 D 261292 CDS YP_004694997.1 339483211 10933884 1917605..1918888 1 NC_015731.1 TIGRFAM: hypothetical protein; KEGG: nit:NAL212_1081 hypothetical protein; hypothetical protein 1918888 10933884 Nit79A3_1788 Nitrosomonas sp. Is79A3 hypothetical protein YP_004694997.1 1917605 D 261292 CDS YP_004694998.1 339483212 10933885 1919255..1920430 1 NC_015731.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: nit:NAL212_1080 ornithine decarboxylase; Orn/DAP/Arg decarboxylase 2 1920430 10933885 Nit79A3_1789 Nitrosomonas sp. Is79A3 Orn/DAP/Arg decarboxylase 2 YP_004694998.1 1919255 D 261292 CDS YP_004694999.1 339483213 10933886 complement(1920547..1921065) 1 NC_015731.1 PFAM: Dihydrofolate reductase region; KEGG: nit:NAL212_1079 dihydrofolate reductase region; dihydrofolate reductase region 1921065 10933886 Nit79A3_1790 Nitrosomonas sp. Is79A3 dihydrofolate reductase region YP_004694999.1 1920547 R 261292 CDS YP_004695000.1 339483214 10933887 complement(1921062..1921856) 1 NC_015731.1 TIGRFAM: Thymidylate synthase, C-terminal; HAMAP: Thymidylate synthase; KEGG: nit:NAL212_1078 thymidylate synthase; PFAM: Thymidylate synthase, C-terminal; thymidylate synthase 1921856 10933887 Nit79A3_1791 Nitrosomonas sp. Is79A3 thymidylate synthase YP_004695000.1 1921062 R 261292 CDS YP_004695001.1 339483215 10933888 1922026..1923483 1 NC_015731.1 PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; KEGG: nit:NAL212_1077 peptidase M17 leucyl aminopeptidase domain-containing protein; peptidase M17 leucyl aminopeptidase domain-containing protein 1923483 10933888 Nit79A3_1792 Nitrosomonas sp. Is79A3 peptidase M17 leucyl aminopeptidase domain-containing protein YP_004695001.1 1922026 D 261292 CDS YP_004695002.1 339483216 10933889 complement(1923506..1924795) 1 NC_015731.1 KEGG: nit:NAL212_1076 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; lytic transglycosylase 1924795 10933889 Nit79A3_1793 Nitrosomonas sp. Is79A3 lytic transglycosylase YP_004695002.1 1923506 R 261292 CDS YP_004695003.1 339483217 10933890 complement(1924951..1925370) 1 NC_015731.1 TIGRFAM: Nitrile oxidoreductase, NADPH-dependent, QueF; HAMAP: Nitrile oxidoreductase, NADPH-dependent, QueF; KEGG: nit:NAL212_1075 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; NADPH-dependent 7-cyano-7-deazaguanine reductase 1925370 10933890 Nit79A3_1794 Nitrosomonas sp. Is79A3 NADPH-dependent 7-cyano-7-deazaguanine reductase YP_004695003.1 1924951 R 261292 CDS YP_004695004.1 339483218 10933891 1925465..1929010 1 NC_015731.1 KEGG: nit:NAL212_1074 chromosome segregation protein SMC; TIGRFAM: Chromosome segregation protein SMC; PFAM: RecF/RecN/SMC protein, N-terminal; SMCs flexible hinge; chromosome segregation protein SMC 1929010 10933891 Nit79A3_1795 Nitrosomonas sp. Is79A3 chromosome segregation protein SMC YP_004695004.1 1925465 D 261292 CDS YP_004695005.1 339483219 10933892 1929097..1930281 1 NC_015731.1 SMART: ZipA, C-terminal FtsZ-binding region; KEGG: nit:NAL212_1073 ZipA FtsZ-binding region protein; ZipA FtsZ-binding region protein 1930281 10933892 Nit79A3_1796 Nitrosomonas sp. Is79A3 ZipA FtsZ-binding region protein YP_004695005.1 1929097 D 261292 CDS YP_004695006.1 339483220 10933893 1930533..1930778 1 NC_015731.1 PFAM: Iron sulphur domain-containing, CDGSH-type; KEGG: bra:BRADO2030 hypothetical protein; Iron sulfur domain-containing, CDGSH-type 1930778 10933893 Nit79A3_1797 Nitrosomonas sp. Is79A3 Iron sulfur domain-containing, CDGSH-type YP_004695006.1 1930533 D 261292 CDS YP_004695007.1 339483221 10933894 1930913..1931110 1 NC_015731.1 KEGG: nit:NAL212_1072 hypothetical protein; hypothetical protein 1931110 10933894 Nit79A3_1798 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695007.1 1930913 D 261292 CDS YP_004695008.1 339483222 10933895 1931103..1931402 1 NC_015731.1 PFAM: Cell division protein ZapA-like; KEGG: nit:NAL212_1071 hypothetical protein; hypothetical protein 1931402 10933895 Nit79A3_1799 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695008.1 1931103 D 261292 CDS YP_004695009.1 339483223 10933897 1931683..1932309 1 NC_015731.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: ipa:Isop_0707 HAD-superfamily hydrolase; HAD-superfamily hydrolase 1932309 10933897 Nit79A3_1800 Nitrosomonas sp. Is79A3 HAD-superfamily hydrolase YP_004695009.1 1931683 D 261292 CDS YP_004695010.1 339483224 10933898 complement(1932349..1933002) 1 NC_015731.1 KEGG: nit:NAL212_1677 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 1933002 10933898 Nit79A3_1801 Nitrosomonas sp. Is79A3 alkyl hydroperoxide reductase YP_004695010.1 1932349 R 261292 CDS YP_004695011.1 339483225 10933899 1933117..1933557 1 NC_015731.1 PFAM: Uncharacterised protein family UPF0310; KEGG: nit:NAL212_1678 hypothetical protein; hypothetical protein 1933557 10933899 Nit79A3_1802 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695011.1 1933117 D 261292 CDS YP_004695012.1 339483226 10933900 1933607..1934404 1 NC_015731.1 PFAM: Protein of unknown function DUF81; KEGG: nit:NAL212_1679 hypothetical protein; hypothetical protein 1934404 10933900 Nit79A3_1803 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695012.1 1933607 D 261292 CDS YP_004695013.1 339483227 10933902 complement(1935241..1937142) 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: nit:NAL212_0942 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 1937142 10933902 Nit79A3_1805 Nitrosomonas sp. Is79A3 diguanylate cyclase YP_004695013.1 1935241 R 261292 CDS YP_004695014.1 339483228 10933903 1937453..1938448 1 NC_015731.1 PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: nit:NAL212_1555 NADPH:quinone reductase; alcohol dehydrogenase 1938448 10933903 Nit79A3_1806 Nitrosomonas sp. Is79A3 alcohol dehydrogenase YP_004695014.1 1937453 D 261292 CDS YP_004695015.1 339483229 10933904 1938745..1940049 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 1940049 10933904 Nit79A3_1807 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695015.1 1938745 D 261292 CDS YP_004695016.1 339483230 10933906 1942690..1943925 1 NC_015731.1 KEGG: nit:NAL212_2625 hypothetical protein; hypothetical protein 1943925 10933906 Nit79A3_1809 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695016.1 1942690 D 261292 CDS YP_004695017.1 339483231 10933909 complement(1945730..1946824) 1 NC_015731.1 PFAM: Glycosyl transferase, group 1; KEGG: nit:NAL212_1316 glycosyl transferase group 1; group 1 glycosyl transferase 1946824 10933909 Nit79A3_1812 Nitrosomonas sp. Is79A3 group 1 glycosyl transferase YP_004695017.1 1945730 R 261292 CDS YP_004695018.1 339483232 10933910 complement(1946828..1947742) 1 NC_015731.1 KEGG: nit:NAL212_1318 sulfotransferase; sulfotransferase 1947742 10933910 Nit79A3_1813 Nitrosomonas sp. Is79A3 sulfotransferase YP_004695018.1 1946828 R 261292 CDS YP_004695019.1 339483233 10933912 complement(1948679..1949995) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: gur:Gura_1234 hypothetical protein; transposase IS4 family protein 1949995 10933912 Nit79A3_1815 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695019.1 1948679 R 261292 CDS YP_004695020.1 339483234 10933913 1950188..1950520 1 NC_015731.1 hypothetical protein 1950520 10933913 Nit79A3_1816 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695020.1 1950188 D 261292 CDS YP_004695021.1 339483235 10933914 complement(1950609..1951913) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 1951913 10933914 Nit79A3_1817 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695021.1 1950609 R 261292 CDS YP_004695022.1 339483236 10933915 complement(1952108..1952728) 1 NC_015731.1 KEGG: nit:NAL212_2982 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 1952728 10933915 Nit79A3_1818 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004695022.1 1952108 R 261292 CDS YP_004695023.1 339483237 10933916 complement(1953149..1953571) 1 NC_015731.1 KEGG: nit:NAL212_0086 hypothetical protein; hypothetical protein 1953571 10933916 Nit79A3_1819 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695023.1 1953149 R 261292 CDS YP_004695024.1 339483238 10933917 complement(1954045..1954539) 1 NC_015731.1 KEGG: noc:Noc_1605 hypothetical protein; TIGRFAM: YbhB/YbcL; PFAM: Phosphatidylethanolamine-binding protein PEBP; hypothetical protein 1954539 10933917 Nit79A3_1820 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695024.1 1954045 R 261292 CDS YP_004695025.1 339483239 10933918 1954701..1955351 1 NC_015731.1 PFAM: Nitroreductase-like; KEGG: rfr:Rfer_0382 hypothetical protein; nitroreductase 1955351 10933918 Nit79A3_1821 Nitrosomonas sp. Is79A3 nitroreductase YP_004695025.1 1954701 D 261292 CDS YP_004695026.1 339483240 10933919 1955471..1955887 1 NC_015731.1 PFAM: Class I peptide chain release factor; KEGG: nit:NAL212_2262 class I peptide chain release factor; Class I peptide chain release factor 1955887 10933919 Nit79A3_1822 Nitrosomonas sp. Is79A3 Class I peptide chain release factor YP_004695026.1 1955471 D 261292 CDS YP_004695027.1 339483241 10933920 1956080..1956673 1 NC_015731.1 PFAM: Protein of unknown function DUF1415; KEGG: slt:Slit_2349 hypothetical protein; hypothetical protein 1956673 10933920 Nit79A3_1823 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695027.1 1956080 D 261292 CDS YP_004695028.1 339483242 10933921 1956676..1957656 1 NC_015731.1 KEGG: slt:Slit_2348 aminoglycoside phosphotransferase; manually curated; PFAM: Aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 1957656 10933921 Nit79A3_1824 Nitrosomonas sp. Is79A3 aminoglycoside phosphotransferase YP_004695028.1 1956676 D 261292 CDS YP_004695029.1 339483243 10933922 complement(1958007..1959161) 1 NC_015731.1 KEGG: dol:Dole_2268 hypothetical protein; hypothetical protein 1959161 10933922 Nit79A3_1825 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695029.1 1958007 R 261292 CDS YP_004695030.1 339483244 10933923 complement(1959430..1959645) 1 NC_015731.1 KEGG: nit:NAL212_3025 viral A-type inclusion protein repeat containing protein; viral A-type inclusion protein repeat containing protein 1959645 10933923 Nit79A3_1826 Nitrosomonas sp. Is79A3 viral A-type inclusion protein repeat containing protein YP_004695030.1 1959430 R 261292 CDS YP_004695031.1 339483245 10933924 complement(1959593..1959865) 1 NC_015731.1 KEGG: ctt:CtCNB1_2990 hypothetical protein; hypothetical protein 1959865 10933924 Nit79A3_1827 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695031.1 1959593 R 261292 CDS YP_004695032.1 339483246 10933925 complement(1959873..1960244) 1 NC_015731.1 KEGG: nit:NAL212_3069 hypothetical protein; hypothetical protein 1960244 10933925 Nit79A3_1828 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695032.1 1959873 R 261292 CDS YP_004695033.1 339483247 10933926 complement(1960241..1961857) 1 NC_015731.1 KEGG: dak:DaAHT2_2156 hypothetical protein; hypothetical protein 1961857 10933926 Nit79A3_1829 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695033.1 1960241 R 261292 CDS YP_004695034.1 339483248 10933927 complement(1961854..1962267) 1 NC_015731.1 KEGG: nit:NAL212_3066 hypothetical protein; hypothetical protein 1962267 10933927 Nit79A3_1830 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695034.1 1961854 R 261292 CDS YP_004695035.1 339483249 10933928 complement(1962270..1962503) 1 NC_015731.1 KEGG: net:Neut_1124 hypothetical protein; hypothetical protein 1962503 10933928 Nit79A3_1831 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695035.1 1962270 R 261292 CDS YP_004695036.1 339483250 10933929 complement(1962672..1963214) 1 NC_015731.1 KEGG: pna:Pnap_2646 hypothetical protein; hypothetical protein 1963214 10933929 Nit79A3_1832 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695036.1 1962672 R 261292 CDS YP_004695037.1 339483251 10933930 complement(1963314..1964525) 1 NC_015731.1 PFAM: Integrase, catalytic core, phage; KEGG: net:Neut_1755 phage integrase; integrase 1964525 10933930 Nit79A3_1833 Nitrosomonas sp. Is79A3 integrase YP_004695037.1 1963314 R 261292 CDS YP_004695038.1 339483252 10933931 complement(1965231..1965524) 1 NC_015731.1 KEGG: nit:NAL212_2788 hypothetical protein; hypothetical protein 1965524 10933931 Nit79A3_1834 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695038.1 1965231 R 261292 CDS YP_004695039.1 339483253 10933932 1966264..1966410 1 NC_015731.1 hypothetical protein 1966410 10933932 Nit79A3_1835 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695039.1 1966264 D 261292 CDS YP_004695040.1 339483254 10933933 complement(1966486..1966806) 1 NC_015731.1 KEGG: nit:NAL212_0956 hypothetical protein; hypothetical protein 1966806 10933933 Nit79A3_1836 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695040.1 1966486 R 261292 CDS YP_004695041.1 339483255 10933934 complement(1966833..1967741) 1 NC_015731.1 KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 1967741 10933934 Nit79A3_1837 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004695041.1 1966833 R 261292 CDS YP_004695042.1 339483256 10933935 complement(1967738..1968061) 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein 1968061 10933935 Nit79A3_1838 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004695042.1 1967738 R 261292 CDS YP_004695043.1 339483257 10933936 complement(1968092..1968445) 1 NC_015731.1 hypothetical protein 1968445 10933936 Nit79A3_1839 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695043.1 1968092 R 261292 CDS YP_004695044.1 339483258 10933937 complement(1968589..1971267) 1 NC_015731.1 PFAM: Glycosyl transferase, family 2; GtrA-like protein; Glycosyl transferase, family 39; KEGG: nmu:Nmul_A1764 dolichyl-phosphate beta-D-mannosyltransferase; glycosyl transferase 2 1971267 10933937 Nit79A3_1840 Nitrosomonas sp. Is79A3 glycosyl transferase 2 YP_004695044.1 1968589 R 261292 CDS YP_004695045.1 339483259 10933938 complement(1971405..1971896) 1 NC_015731.1 hypothetical protein 1971896 10933938 Nit79A3_1841 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695045.1 1971405 R 261292 CDS YP_004695046.1 339483260 10933939 complement(1971932..1972843) 1 NC_015731.1 KEGG: nda:Ndas_3717 methyltransferase type 12; hypothetical protein 1972843 10933939 Nit79A3_1842 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695046.1 1971932 R 261292 CDS YP_004695047.1 339483261 10933940 complement(1972871..1974238) 1 NC_015731.1 KEGG: nmu:Nmul_A0618 cytochrome c1 signal peptide protein; hypothetical protein 1974238 10933940 Nit79A3_1843 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695047.1 1972871 R 261292 CDS YP_004695048.1 339483262 10933941 1974625..1975059 1 NC_015731.1 KEGG: nmu:Nmul_A1496 hypothetical protein; hypothetical protein 1975059 10933941 Nit79A3_1844 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695048.1 1974625 D 261292 CDS YP_004695049.1 339483263 10933943 1976532..1977296 1 NC_015731.1 manually curated; KEGG: nit:NAL212_0007 hypothetical protein; hypothetical protein 1977296 10933943 Nit79A3_1846 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695049.1 1976532 D 261292 CDS YP_004695050.1 339483264 10933944 1977323..1977673 1 NC_015731.1 KEGG: nit:NAL212_0008 hypothetical protein; hypothetical protein 1977673 10933944 Nit79A3_1847 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695050.1 1977323 D 261292 CDS YP_004695051.1 339483265 10933945 complement(1977748..1978098) 1 NC_015731.1 KEGG: nit:NAL212_0009 hypothetical protein; hypothetical protein 1978098 10933945 Nit79A3_1848 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695051.1 1977748 R 261292 CDS YP_004695052.1 339483266 10933946 complement(1978169..1978279) 1 NC_015731.1 hypothetical protein 1978279 10933946 Nit79A3_1849 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695052.1 1978169 R 261292 CDS YP_004695053.1 339483267 10933948 1979609..1979932 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein 1979932 10933948 Nit79A3_1851 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004695053.1 1979609 D 261292 CDS YP_004695054.1 339483268 10933949 1979929..1980837 1 NC_015731.1 KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 1980837 10933949 Nit79A3_1852 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004695054.1 1979929 D 261292 CDS YP_004695055.1 339483269 10933950 complement(1980834..1981058) 1 NC_015731.1 KEGG: net:Neut_2405 transposase, mutator type; transposase, mutator type 1981058 10933950 Nit79A3_1853 Nitrosomonas sp. Is79A3 transposase, mutator type YP_004695055.1 1980834 R 261292 CDS YP_004695056.1 339483270 10933951 1981196..1981702 1 NC_015731.1 PFAM: Protein of unknown function DUF1917; KEGG: nit:NAL212_0075 hypothetical protein; hypothetical protein 1981702 10933951 Nit79A3_1854 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695056.1 1981196 D 261292 CDS YP_004695057.1 339483271 10933952 1981727..1982017 1 NC_015731.1 KEGG: nit:NAL212_0074 DNA methylase; DNA methylase 1982017 10933952 Nit79A3_1855 Nitrosomonas sp. Is79A3 DNA methylase YP_004695057.1 1981727 D 261292 CDS YP_004695058.1 339483272 10933953 complement(1982253..1982504) 1 NC_015731.1 KEGG: nit:NAL212_0145 regulatory protein, FmdB family; TIGRFAM: Regulatory protein, FmdB, PFAM: Regulatory protein, FmdB; FmdB family regulatory protein 1982504 10933953 Nit79A3_1856 Nitrosomonas sp. Is79A3 FmdB family regulatory protein YP_004695058.1 1982253 R 261292 CDS YP_004695059.1 339483273 10933954 complement(1982603..1983400) 1 NC_015731.1 PFAM: Carbonic anhydrase; KEGG: nit:NAL212_0146 carbonic anhydrase; carbonic anhydrase 1983400 10933954 Nit79A3_1857 Nitrosomonas sp. Is79A3 carbonic anhydrase YP_004695059.1 1982603 R 261292 CDS YP_004695060.1 339483274 10933955 1983517..1985079 1 NC_015731.1 KEGG: nit:NAL212_0147 sigma54 specific transcriptional regulator, Fis family; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; Fis family transcriptional regulator 1985079 10933955 Nit79A3_1858 Nitrosomonas sp. Is79A3 Fis family transcriptional regulator YP_004695060.1 1983517 D 261292 CDS YP_004695061.1 339483275 10933956 1985112..1987559 1 NC_015731.1 KEGG: reu:Reut_A1185 ATPase, E1-E2 type; TIGRFAM: ATPase, P-type, plasma-membrane proton-efflux; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; plasma-membrane proton-efflux P-type ATPase 1987559 10933956 Nit79A3_1859 Nitrosomonas sp. Is79A3 plasma-membrane proton-efflux P-type ATPase YP_004695061.1 1985112 D 261292 CDS YP_004695062.1 339483276 10933957 1987870..1988922 1 NC_015731.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: net:Neut_1521 cytochrome-c peroxidase; Di-heme cytochrome c peroxidase 1988922 10933957 Nit79A3_1860 Nitrosomonas sp. Is79A3 Di-heme cytochrome c peroxidase YP_004695062.1 1987870 D 261292 CDS YP_004695063.1 339483277 10933958 1988971..1989324 1 NC_015731.1 PFAM: Sulphur relay, DsrE-like protein; KEGG: nhl:Nhal_2753 DsrE family protein; DsrE family protein 1989324 10933958 Nit79A3_1861 Nitrosomonas sp. Is79A3 DsrE family protein YP_004695063.1 1988971 D 261292 CDS YP_004695064.1 339483278 10933959 1989479..1990729 1 NC_015731.1 PFAM: Ferric reductase-like transmembrane component, N-terminal; Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding; KEGG: app:CAP2UW1_2674 ferric reductase domain-containing protein protein transmembrane component domain-containing protein; ferric reductase 1990729 10933959 Nit79A3_1862 Nitrosomonas sp. Is79A3 ferric reductase YP_004695064.1 1989479 D 261292 CDS YP_004695065.1 339483279 10933961 complement(1990971..1991957) 1 NC_015731.1 TIGRFAM: Phosphate binding protein; KEGG: nit:NAL212_2082 phosphate binding protein; phosphate binding protein 1991957 10933961 Nit79A3_1864 Nitrosomonas sp. Is79A3 phosphate binding protein YP_004695065.1 1990971 R 261292 CDS YP_004695066.1 339483280 10933962 complement(1992026..1993288) 1 NC_015731.1 KEGG: tbd:Tbd_2610 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; integral membrane sensor signal transduction histidine kinase 1993288 10933962 Nit79A3_1865 Nitrosomonas sp. Is79A3 integral membrane sensor signal transduction histidine kinase YP_004695066.1 1992026 R 261292 CDS YP_004695067.1 339483281 10933963 complement(1993275..1993958) 1 NC_015731.1 KEGG: response regulator, OmpR family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator 1993958 10933963 Nit79A3_1866 Nitrosomonas sp. Is79A3 winged helix family two component transcriptional regulator YP_004695067.1 1993275 R 261292 CDS YP_004695068.1 339483282 10933964 1994404..1995291 1 NC_015731.1 KEGG: nit:NAL212_2282 hypothetical protein; hypothetical protein 1995291 10933964 Nit79A3_1867 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695068.1 1994404 D 261292 CDS YP_004695069.1 339483283 10933965 1995392..1995805 1 NC_015731.1 KEGG: nit:NAL212_0893 hypothetical protein; hypothetical protein 1995805 10933965 Nit79A3_1868 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695069.1 1995392 D 261292 CDS YP_004695070.1 339483284 10933966 1995928..1996512 1 NC_015731.1 KEGG: rpd:RPD_2508 hypothetical protein; hypothetical protein 1996512 10933966 Nit79A3_1869 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695070.1 1995928 D 261292 CDS YP_004695071.1 339483285 10933968 complement(1997129..1997473) 1 NC_015731.1 KEGG: nit:NAL212_1820 hypothetical protein; hypothetical protein 1997473 10933968 Nit79A3_1871 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695071.1 1997129 R 261292 CDS YP_004695072.1 339483286 10933969 complement(1997600..1998205) 1 NC_015731.1 KEGG: neu:NE1752 hypothetical protein; hypothetical protein 1998205 10933969 Nit79A3_1872 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695072.1 1997600 R 261292 CDS YP_004695073.1 339483287 10933970 1998512..1999021 1 NC_015731.1 KEGG: neu:NE1179 transmembrane protein; transmembrane protein 1999021 10933970 Nit79A3_1873 Nitrosomonas sp. Is79A3 transmembrane protein YP_004695073.1 1998512 D 261292 CDS YP_004695074.1 339483288 10933971 complement(1999084..1999449) 1 NC_015731.1 KEGG: nit:NAL212_1773 hypothetical protein; hypothetical protein 1999449 10933971 Nit79A3_1874 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695074.1 1999084 R 261292 CDS YP_004695075.1 339483289 10933972 complement(1999625..2000524) 1 NC_015731.1 KEGG: dol:Dole_2710 hypothetical protein; hypothetical protein 2000524 10933972 Nit79A3_1875 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695075.1 1999625 R 261292 CDS YP_004695076.1 339483290 10933973 2000720..2001835 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein 2001835 10933973 Nit79A3_1876 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695076.1 2000720 D 261292 CDS YP_004695077.1 339483291 10933978 complement(2004977..2006206) 1 NC_015731.1 KEGG: nit:NAL212_1513 aspartate kinase; TIGRFAM: Aspartate kinase region; Aspartate kinase, monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; aspartate kinase 2006206 10933978 Nit79A3_1880 Nitrosomonas sp. Is79A3 aspartate kinase YP_004695077.1 2004977 R 261292 CDS YP_004695078.1 339483292 10933979 complement(2006607..2007392) 1 NC_015731.1 PFAM: Class II aldolase/adducin, N-terminal; KEGG: nit:NAL212_0867 class II aldolase/adducin family protein; class II aldolase/adducin family protein 2007392 10933979 Nit79A3_1881 Nitrosomonas sp. Is79A3 class II aldolase/adducin family protein YP_004695078.1 2006607 R 261292 CDS YP_004695079.1 339483293 10933980 complement(2007453..2007857) 1 NC_015731.1 KEGG: nit:NAL212_0866 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4; RNA-binding S4 domain-containing protein 2007857 10933980 Nit79A3_1882 Nitrosomonas sp. Is79A3 RNA-binding S4 domain-containing protein YP_004695079.1 2007453 R 261292 CDS YP_004695080.1 339483294 10933981 complement(2007865..2009097) 1 NC_015731.1 PFAM: Peroxiredoxin, OsmC-like protein; KEGG: nit:NAL212_0865 OsmC family protein; OsmC family protein 2009097 10933981 Nit79A3_1883 Nitrosomonas sp. Is79A3 OsmC family protein YP_004695080.1 2007865 R 261292 CDS YP_004695081.1 339483295 10933982 complement(2009331..2010197) 1 NC_015731.1 KEGG: nit:NAL212_0864 hypothetical protein; hypothetical protein 2010197 10933982 Nit79A3_1884 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695081.1 2009331 R 261292 CDS YP_004695082.1 339483296 10933983 2010387..2011319 1 NC_015731.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; KEGG: slt:Slit_2280 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein 2011319 10933983 Nit79A3_1885 Nitrosomonas sp. Is79A3 NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein YP_004695082.1 2010387 D 261292 CDS YP_004695083.1 339483297 10933984 2011604..2012524 1 NC_015731.1 KEGG: nit:NAL212_0855 branched-chain amino acid aminotransferase; TIGRFAM: Branched-chain amino acid aminotransferase I; PFAM: Aminotransferase, class IV; branched-chain amino acid aminotransferase 2012524 10933984 Nit79A3_1886 Nitrosomonas sp. Is79A3 branched-chain amino acid aminotransferase YP_004695083.1 2011604 D 261292 CDS YP_004695084.1 339483298 10933985 2012550..2012753 1 NC_015731.1 KEGG: nit:NAL212_0854 hypothetical protein; hypothetical protein 2012753 10933985 Nit79A3_1887 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695084.1 2012550 D 261292 CDS YP_004695085.1 339483299 10933986 2012867..2014243 1 NC_015731.1 PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; KEGG: nit:NAL212_0853 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II 2014243 10933986 Nit79A3_1888 Nitrosomonas sp. Is79A3 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II YP_004695085.1 2012867 D 261292 CDS YP_004695086.1 339483300 10933987 2014433..2016061 1 NC_015731.1 KEGG: nit:NAL212_0852 NAD+ synthetase; TIGRFAM: NAD+ synthase; PFAM: NAD+ synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthetase 2016061 10933987 Nit79A3_1889 Nitrosomonas sp. Is79A3 NAD+ synthetase YP_004695086.1 2014433 D 261292 CDS YP_004695087.1 339483301 10933988 2016106..2017617 1 NC_015731.1 PFAM: Peptidase M48, Ste24p; KEGG: nit:NAL212_0851 peptidase M48 Ste24p; peptidase M48 Ste24p 2017617 10933988 Nit79A3_1890 Nitrosomonas sp. Is79A3 peptidase M48 Ste24p YP_004695087.1 2016106 D 261292 CDS YP_004695088.1 339483302 10933989 2017722..2018870 1 NC_015731.1 KEGG: nit:NAL212_0850 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 2018870 10933989 Nit79A3_1891 Nitrosomonas sp. Is79A3 RND family efflux transporter MFP subunit YP_004695088.1 2017722 D 261292 CDS YP_004695089.1 339483303 10933990 2018870..2019628 1 NC_015731.1 KEGG: nit:NAL212_0849 phosphonate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 2019628 10933990 Nit79A3_1892 Nitrosomonas sp. Is79A3 ABC transporter YP_004695089.1 2018870 D 261292 CDS YP_004695090.1 339483304 10933991 2019692..2020915 1 NC_015731.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: nit:NAL212_0848 hypothetical protein; hypothetical protein 2020915 10933991 Nit79A3_1893 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695090.1 2019692 D 261292 CDS YP_004695091.1 339483305 10933992 2020971..2021582 1 NC_015731.1 PFAM: Exopolysaccharide synthesis, ExoD; KEGG: nit:NAL212_0212 exopolysaccharide synthesis ExoD; Exopolysaccharide synthesis ExoD 2021582 10933992 Nit79A3_1894 Nitrosomonas sp. Is79A3 Exopolysaccharide synthesis ExoD YP_004695091.1 2020971 D 261292 CDS YP_004695092.1 339483306 10933993 2021675..2024560 1 NC_015731.1 KEGG: nit:NAL212_1945 signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; signal transduction histidine kinase 2024560 10933993 Nit79A3_1895 Nitrosomonas sp. Is79A3 signal transduction histidine kinase YP_004695092.1 2021675 D 261292 CDS YP_004695093.1 339483307 10933994 2024562..2025215 1 NC_015731.1 KEGG: nit:NAL212_1946 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 2025215 10933994 Nit79A3_1896 Nitrosomonas sp. Is79A3 LuxR family transcriptional regulator YP_004695093.1 2024562 D 261292 CDS YP_004695094.1 339483308 10933995 2025336..2025848 1 NC_015731.1 KEGG: nit:NAL212_1947 hypothetical protein; hypothetical protein 2025848 10933995 Nit79A3_1897 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695094.1 2025336 D 261292 CDS YP_004695095.1 339483309 10933996 2026064..2027413 1 NC_015731.1 PFAM: Protein of unknown function DUF1597; KEGG: nit:NAL212_1948 hypothetical protein; hypothetical protein 2027413 10933996 Nit79A3_1898 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695095.1 2026064 D 261292 CDS YP_004695096.1 339483310 10933997 complement(2027495..2027917) 1 NC_015731.1 KEGG: nit:NAL212_1949 hypothetical protein; hypothetical protein 2027917 10933997 Nit79A3_1899 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695096.1 2027495 R 261292 CDS YP_004695097.1 339483311 10933998 2028209..2029522 1 NC_015731.1 PFAM: Protein of unknown function DUF1597; KEGG: nit:NAL212_1950 hypothetical protein; hypothetical protein 2029522 10933998 Nit79A3_1900 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695097.1 2028209 D 261292 CDS YP_004695098.1 339483312 10933999 complement(2029558..2031012) 1 NC_015731.1 KEGG: nit:NAL212_1586 ribonuclease, Rne/Rng family; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain; ribonuclease, Rne/Rng family 2031012 10933999 Nit79A3_1901 Nitrosomonas sp. Is79A3 ribonuclease, Rne/Rng family YP_004695098.1 2029558 R 261292 CDS YP_004695099.1 339483313 10934000 complement(2031148..2031768) 1 NC_015731.1 TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: nit:NAL212_1585 maf protein; PFAM: Maf-like protein; Septum formation protein Maf 2031768 10934000 Nit79A3_1902 Nitrosomonas sp. Is79A3 Septum formation protein Maf YP_004695099.1 2031148 R 261292 CDS YP_004695100.1 339483314 10934001 complement(2031868..2032338) 1 NC_015731.1 PFAM: SPOUT methyltransferase, predicted; manually curated; TIGRFAM: Conserved hypothetical protein CHP00246; KEGG: nit:NAL212_1584 SPOUT methyltransferase; HAMAP: Ribosomal RNA large subunit methyltransferase H; Ribosomal RNA large subunit methyltransferase H 2032338 10934001 Nit79A3_1903 Nitrosomonas sp. Is79A3 Ribosomal RNA large subunit methyltransferase H YP_004695100.1 2031868 R 261292 CDS YP_004695101.1 339483315 10934002 complement(2032396..2032722) 1 NC_015731.1 KEGG: nit:NAL212_1583 iojap-like protein; TIGRFAM: Iojap-related protein; PFAM: Iojap-related protein; iojap-like protein 2032722 10934002 Nit79A3_1904 Nitrosomonas sp. Is79A3 iojap-like protein YP_004695101.1 2032396 R 261292 CDS YP_004695102.1 339483316 10934003 complement(2032719..2033396) 1 NC_015731.1 TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; HAMAP: nicotinate-nucleotide adenylyltransferase; KEGG: nit:NAL212_1582 nicotinate-nucleotide adenylyltransferase; PFAM: Cytidylyltransferase; nicotinate-nucleotide adenylyltransferase 2033396 10934003 Nit79A3_1905 Nitrosomonas sp. Is79A3 nicotinate-nucleotide adenylyltransferase YP_004695102.1 2032719 R 261292 CDS YP_004695103.1 339483317 10934004 complement(2033430..2034740) 1 NC_015731.1 PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; KEGG: nit:NAL212_1581 dihydrolipoyllysine-residue acetyltransferase; hypothetical protein 2034740 10934004 Nit79A3_1906 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695103.1 2033430 R 261292 CDS YP_004695104.1 339483318 10934005 complement(2034835..2037495) 1 NC_015731.1 KEGG: nit:NAL212_1580 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; PFAM: Transketolase, N-terminal; 2-oxo-acid dehydrogenase E1 2037495 10934005 Nit79A3_1907 Nitrosomonas sp. Is79A3 2-oxo-acid dehydrogenase E1 YP_004695104.1 2034835 R 261292 CDS YP_004695105.1 339483319 10934006 complement(2037527..2038393) 1 NC_015731.1 KEGG: nit:NAL212_1579 methylenetetrahydrofolate dehydrogenase (NADP(+)); HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; Bifunctional protein folD 2038393 10934006 Nit79A3_1908 Nitrosomonas sp. Is79A3 Bifunctional protein folD YP_004695105.1 2037527 R 261292 CDS YP_004695106.1 339483320 10934007 complement(2038482..2039171) 1 NC_015731.1 KEGG: nit:NAL212_1578 hypothetical protein; hypothetical protein 2039171 10934007 Nit79A3_1909 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695106.1 2038482 R 261292 CDS YP_004695107.1 339483321 10934008 complement(2039317..2040177) 1 NC_015731.1 KEGG: nit:NAL212_1577 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 2040177 10934008 Nit79A3_1910 Nitrosomonas sp. Is79A3 5,10-methylenetetrahydrofolate reductase YP_004695107.1 2039317 R 261292 CDS YP_004695108.1 339483322 10934009 complement(2040325..2041758) 1 NC_015731.1 TIGRFAM: S-adenosyl-L-homocysteine hydrolase; HAMAP: Adenosylhomocysteinase; KEGG: nit:NAL212_1576 adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding; adenosylhomocysteinase 2041758 10934009 Nit79A3_1911 Nitrosomonas sp. Is79A3 adenosylhomocysteinase YP_004695108.1 2040325 R 261292 CDS YP_004695109.1 339483323 10934010 complement(2041903..2043066) 1 NC_015731.1 TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; KEGG: nit:NAL212_1575 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthase 2043066 10934010 Nit79A3_1912 Nitrosomonas sp. Is79A3 S-adenosylmethionine synthase YP_004695109.1 2041903 R 261292 CDS YP_004695110.1 339483324 10934011 complement(2043184..2044641) 1 NC_015731.1 KEGG: pbr:PB2503_07429 hypothetical protein; hypothetical protein 2044641 10934011 Nit79A3_1913 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695110.1 2043184 R 261292 CDS YP_004695111.1 339483325 10934012 complement(2044642..2045706) 1 NC_015731.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: pbr:PB2503_07499 hydrolase; alpha/beta hydrolase 2045706 10934012 Nit79A3_1914 Nitrosomonas sp. Is79A3 alpha/beta hydrolase YP_004695111.1 2044642 R 261292 CDS YP_004695112.1 339483326 10934013 complement(2045712..2047310) 1 NC_015731.1 PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; KEGG: gvi:gll4223 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase 2047310 10934013 Nit79A3_1915 Nitrosomonas sp. Is79A3 type I phosphodiesterase/nucleotide pyrophosphatase YP_004695112.1 2045712 R 261292 CDS YP_004695113.1 339483327 10934014 complement(2047325..2047618) 1 NC_015731.1 KEGG: gvi:gsl4224 acyl carrier protein; acyl carrier protein 2047618 10934014 Nit79A3_1916 Nitrosomonas sp. Is79A3 acyl carrier protein YP_004695113.1 2047325 R 261292 CDS YP_004695114.1 339483328 10934015 complement(2047643..2052397) 1 NC_015731.1 PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; 4'-phosphopantetheinyl transferase; KEGG: gvi:gll4225 glycolipid synthase; beta-ketoacyl synthase 2052397 10934015 Nit79A3_1917 Nitrosomonas sp. Is79A3 beta-ketoacyl synthase YP_004695114.1 2047643 R 261292 CDS YP_004695115.1 339483329 10934016 complement(2052397..2060673) 1 NC_015731.1 TIGRFAM: Polyketide-type polyunsaturated fatty acid synthase, PfaA; KEGG: pbr:PB2503_07474 modular polyketide synthase; PFAM: Beta-ketoacyl synthase, N-terminal; 2-nitropropane dioxygenase, NPD; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding; Polyketide synthase, KR; polyketide-type polyunsaturated fatty acid synthase PfaA 2060673 10934016 Nit79A3_1918 Nitrosomonas sp. Is79A3 polyketide-type polyunsaturated fatty acid synthase PfaA YP_004695115.1 2052397 R 261292 CDS YP_004695116.1 339483330 10934017 complement(2061376..2061816) 1 NC_015731.1 KEGG: eba:ebA563 transposition helper protein; manually curated; PFAM: Transposase IS200-like; transposase IS200-family protein 2061816 10934017 Nit79A3_1919 Nitrosomonas sp. Is79A3 transposase IS200-family protein YP_004695116.1 2061376 R 261292 CDS YP_004695117.1 339483331 10934018 complement(2062264..2063130) 1 NC_015731.1 PFAM: Phospholipase/carboxylesterase; KEGG: dsh:Dshi_0713 poly(3-hydroxybutyrate) depolymerase-like protein; phospholipase/Carboxylesterase 2063130 10934018 Nit79A3_1920 Nitrosomonas sp. Is79A3 phospholipase/Carboxylesterase YP_004695117.1 2062264 R 261292 CDS YP_004695118.1 339483332 10934019 complement(2063477..2064124) 1 NC_015731.1 TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; KEGG: nit:NAL212_2318 PEP motif anchor domain-containing protein; PEP motif anchor domain-containing protein 2064124 10934019 Nit79A3_1921 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004695118.1 2063477 R 261292 CDS YP_004695119.1 339483333 10934020 2064480..2065787 1 NC_015731.1 KEGG: nfa:nfa33950 hypothetical protein; hypothetical protein 2065787 10934020 Nit79A3_1922 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695119.1 2064480 D 261292 CDS YP_004695120.1 339483334 10934021 2066087..2067346 1 NC_015731.1 KEGG: gvi:glr4232 hypothetical protein; hypothetical protein 2067346 10934021 Nit79A3_1923 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695120.1 2066087 D 261292 CDS YP_004695121.1 339483335 10934022 complement(2067633..2068232) 1 NC_015731.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: nit:NAL212_2512 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 2068232 10934022 Nit79A3_1924 Nitrosomonas sp. Is79A3 CDP-alcohol phosphatidyltransferase YP_004695121.1 2067633 R 261292 CDS YP_004695122.1 339483336 10934023 2068669..2069424 1 NC_015731.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: nit:NAL212_2514 endonuclease/exonuclease/phosphatase; hypothetical protein 2069424 10934023 Nit79A3_1925 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695122.1 2068669 D 261292 CDS YP_004695123.1 339483337 10934024 complement(2069473..2071884) 1 NC_015731.1 TIGRFAM: Peptidase S16, ATP-dependent protease La; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core; KEGG: nit:NAL212_2515 anti-sigma H sporulation factor, LonB; SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; anti-sigma H sporulation factor, LonB 2071884 10934024 Nit79A3_1926 Nitrosomonas sp. Is79A3 anti-sigma H sporulation factor, LonB YP_004695123.1 2069473 R 261292 CDS YP_004695124.1 339483338 10934025 complement(2072037..2073314) 1 NC_015731.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Clp protease, ATP-binding subunit ClpX; KEGG: nit:NAL212_2516 ATP-dependent Clp protease, ATP-binding subunit ClpX; HAMAP: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase associated with various cellular activities, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; ATP-dependent Clp protease ATP-binding subunit ClpX 2073314 10934025 Nit79A3_1927 Nitrosomonas sp. Is79A3 ATP-dependent Clp protease ATP-binding subunit ClpX YP_004695124.1 2072037 R 261292 CDS YP_004695125.1 339483339 10934026 complement(2073381..2074022) 1 NC_015731.1 TIGRFAM: Peptidase S14, ClpP; HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: nit:NAL212_2517 ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: Peptidase S14, ClpP; ATP-dependent Clp protease proteolytic subunit 2074022 10934026 Nit79A3_1928 Nitrosomonas sp. Is79A3 ATP-dependent Clp protease proteolytic subunit YP_004695125.1 2073381 R 261292 CDS YP_004695126.1 339483340 10934027 complement(2074024..2075328) 1 NC_015731.1 TIGRFAM: Trigger factor; HAMAP: Trigger factor; KEGG: nit:NAL212_2518 trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type; Trigger factor, C-terminal, bacterial; Trigger factor 2075328 10934027 Nit79A3_1929 Nitrosomonas sp. Is79A3 Trigger factor YP_004695126.1 2074024 R 261292 CDS YP_004695127.1 339483341 10934029 complement(2075592..2076338) 1 NC_015731.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nit:NAL212_2519 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2076338 10934029 Nit79A3_1930 Nitrosomonas sp. Is79A3 short-chain dehydrogenase/reductase SDR YP_004695127.1 2075592 R 261292 CDS YP_004695128.1 339483342 10934030 complement(2076500..2078152) 1 NC_015731.1 TIGRFAM: Chaperonin Cpn60; HAMAP: 60 kDa chaperonin; KEGG: nit:NAL212_2520 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; molecular chaperone GroEL 2078152 10934030 Nit79A3_1931 Nitrosomonas sp. Is79A3 molecular chaperone GroEL YP_004695128.1 2076500 R 261292 CDS YP_004695129.1 339483343 10934031 complement(2078210..2078500) 1 NC_015731.1 KEGG: nit:NAL212_2521 chaperonin Cpn10; HAMAP: Chaperonin Cpn10, subgroup; PFAM: Chaperonin Cpn10; molecular chaperone GroES 2078500 10934031 Nit79A3_1932 Nitrosomonas sp. Is79A3 molecular chaperone GroES YP_004695129.1 2078210 R 261292 CDS YP_004695130.1 339483344 10934032 complement(2078878..2080044) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: dar:Daro_2223 transposase IS4; transposase IS4 family protein 2080044 10934032 Nit79A3_1933 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695130.1 2078878 R 261292 CDS YP_004695131.1 339483345 10934033 complement(2080636..2082030) 1 NC_015731.1 TIGRFAM: PAS; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor region; PAS fold; ATP-binding region, ATPase-like; KEGG: nit:NAL212_1749 signal transduction histidine kinase; SMART: PAS; PAC motif; ATP-binding region, ATPase-like; signal transduction histidine kinase 2082030 10934033 Nit79A3_1934 Nitrosomonas sp. Is79A3 signal transduction histidine kinase YP_004695131.1 2080636 R 261292 CDS YP_004695132.1 339483346 10934034 complement(2082074..2084515) 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: nit:NAL212_1748 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 2084515 10934034 Nit79A3_1935 Nitrosomonas sp. Is79A3 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) YP_004695132.1 2082074 R 261292 CDS YP_004695133.1 339483347 10934035 complement(2084936..2085970) 1 NC_015731.1 KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase 2085970 10934035 Nit79A3_1936 Nitrosomonas sp. Is79A3 isxo7 transposase YP_004695133.1 2084936 R 261292 CDS YP_004695134.1 339483348 10934036 complement(2086549..2087292) 1 NC_015731.1 PFAM: TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C; KEGG: nit:NAL212_1610 TenA/THI-4 domain-containing protein; TENA/THI-4 domain-containing protein 2087292 10934036 Nit79A3_1937 Nitrosomonas sp. Is79A3 TENA/THI-4 domain-containing protein YP_004695134.1 2086549 R 261292 CDS YP_004695135.1 339483349 10934037 complement(2087369..2089663) 1 NC_015731.1 TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; HAMAP: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; KEGG: nit:NAL212_1609 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 2089663 10934037 Nit79A3_1938 Nitrosomonas sp. Is79A3 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase YP_004695135.1 2087369 R 261292 CDS YP_004695136.1 339483350 10934038 2089769..2090668 1 NC_015731.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nit:NAL212_1608 transcriptional regulator, LysR family; LysR family transcriptional regulator 2090668 10934038 Nit79A3_1939 Nitrosomonas sp. Is79A3 LysR family transcriptional regulator YP_004695136.1 2089769 D 261292 CDS YP_004695137.1 339483351 10934039 complement(2090683..2092638) 1 NC_015731.1 KEGG: mts:MTES_0753 hypothetical protein; hypothetical protein 2092638 10934039 Nit79A3_1940 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695137.1 2090683 R 261292 CDS YP_004695138.1 339483352 10934040 2093260..2093679 1 NC_015731.1 KEGG: nit:NAL212_1035 hypothetical protein; hypothetical protein 2093679 10934040 Nit79A3_1941 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695138.1 2093260 D 261292 CDS YP_004695139.1 339483353 10934041 complement(2093746..2094054) 1 NC_015731.1 KEGG: nit:NAL212_1034 glutaredoxin-like protein; TIGRFAM: Glutaredoxin-related protein; PFAM: Glutaredoxin; glutaredoxin-like protein 2094054 10934041 Nit79A3_1942 Nitrosomonas sp. Is79A3 glutaredoxin-like protein YP_004695139.1 2093746 R 261292 CDS YP_004695140.1 339483354 10934042 complement(2094140..2094976) 1 NC_015731.1 KEGG: nit:NAL212_1033 protein-(glutamine-N5) methyltransferase, release factor-specific; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; PFAM: Methyltransferase small; protein-(glutamine-N5) methyltransferase, release factor-specific 2094976 10934042 Nit79A3_1943 Nitrosomonas sp. Is79A3 protein-(glutamine-N5) methyltransferase, release factor-specific YP_004695140.1 2094140 R 261292 CDS YP_004695141.1 339483355 10934043 complement(2094999..2096078) 1 NC_015731.1 TIGRFAM: Peptide chain release factor 1; HAMAP: Peptide chain release factor 1; KEGG: nit:NAL212_1032 peptide chain release factor 1; PFAM: Class I peptide chain release factor; Peptide chain release factor; peptide chain release factor 1 2096078 10934043 Nit79A3_1944 Nitrosomonas sp. Is79A3 peptide chain release factor 1 YP_004695141.1 2094999 R 261292 CDS YP_004695142.1 339483356 10934044 complement(2096075..2097328) 1 NC_015731.1 TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; KEGG: nit:NAL212_1031 glutamyl-tRNA reductase; PFAM: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal; Glutamyl-tRNA reductase 2097328 10934044 Nit79A3_1945 Nitrosomonas sp. Is79A3 Glutamyl-tRNA reductase YP_004695142.1 2096075 R 261292 CDS YP_004695143.1 339483357 10934045 complement(2097458..2097958) 1 NC_015731.1 PFAM: CreA; KEGG: nit:NAL212_1030 CreA family protein; CreA family protein 2097958 10934045 Nit79A3_1946 Nitrosomonas sp. Is79A3 CreA family protein YP_004695143.1 2097458 R 261292 CDS YP_004695144.1 339483358 10934047 complement(2098432..2099211) 1 NC_015731.1 PFAM: Carbonic anhydrase; KEGG: nit:NAL212_0011 carbonic anhydrase; carbonic anhydrase 2099211 10934047 Nit79A3_1947 Nitrosomonas sp. Is79A3 carbonic anhydrase YP_004695144.1 2098432 R 261292 CDS YP_004695145.1 339483359 10934048 2099549..2099992 1 NC_015731.1 KEGG: nit:NAL212_1029 hypothetical protein; hypothetical protein 2099992 10934048 Nit79A3_1948 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695145.1 2099549 D 261292 CDS YP_004695146.1 339483360 10934049 complement(2100069..2101529) 1 NC_015731.1 KEGG: nit:NAL212_1028 dihydrolipoamide dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoamide dehydrogenase 2101529 10934049 Nit79A3_1949 Nitrosomonas sp. Is79A3 dihydrolipoamide dehydrogenase YP_004695146.1 2100069 R 261292 CDS YP_004695147.1 339483361 10934050 complement(2101629..2102681) 1 NC_015731.1 PFAM: Glycoside hydrolase, family 3, N-terminal; KEGG: nit:NAL212_1027 glycoside hydrolase 3 domain-containing protein; glycoside hydrolase 3 domain-containing protein 2102681 10934050 Nit79A3_1950 Nitrosomonas sp. Is79A3 glycoside hydrolase 3 domain-containing protein YP_004695147.1 2101629 R 261292 CDS YP_004695148.1 339483362 10934051 complement(2102684..2103061) 1 NC_015731.1 TIGRFAM: Phosphopantethiene-protein transferase; Holo-[acyl carrier protein] synthase; HAMAP: Holo-[acyl-carrier-protein] synthase; KEGG: nit:NAL212_1026 holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; holo-ACP synthase 2103061 10934051 Nit79A3_1951 Nitrosomonas sp. Is79A3 holo-ACP synthase YP_004695148.1 2102684 R 261292 CDS YP_004695149.1 339483363 10934052 complement(2103058..2103783) 1 NC_015731.1 TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; KEGG: nit:NAL212_1025 pyridoxal phosphate biosynthetic protein PdxJ; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; Pyridoxine 5'-phosphate synthase 2103783 10934052 Nit79A3_1952 Nitrosomonas sp. Is79A3 Pyridoxine 5'-phosphate synthase YP_004695149.1 2103058 R 261292 CDS YP_004695150.1 339483364 10934053 complement(2103832..2104725) 1 NC_015731.1 TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; HAMAP: GTP-binding protein Era; KEGG: nit:NAL212_1024 GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; GTP-binding protein Era 2104725 10934053 Nit79A3_1953 Nitrosomonas sp. Is79A3 GTP-binding protein Era YP_004695150.1 2103832 R 261292 CDS YP_004695151.1 339483365 10934054 complement(2104764..2105480) 1 NC_015731.1 SMART: Ribonuclease III; Double-stranded RNA binding; TIGRFAM: Ribonuclease III, bacterial; KEGG: nit:NAL212_1023 ribonuclease III; HAMAP: Ribonuclease III, bacterial; PFAM: Ribonuclease III; Double-stranded RNA binding; Ribonuclease 3 2105480 10934054 Nit79A3_1954 Nitrosomonas sp. Is79A3 Ribonuclease 3 YP_004695151.1 2104764 R 261292 CDS YP_004695152.1 339483366 10934055 complement(2105495..2105866) 1 NC_015731.1 KEGG: nit:NAL212_1022 transmembrane protein; transmembrane protein 2105866 10934055 Nit79A3_1955 Nitrosomonas sp. Is79A3 transmembrane protein YP_004695152.1 2105495 R 261292 CDS YP_004695153.1 339483367 10934056 complement(2105901..2106704) 1 NC_015731.1 KEGG: nit:NAL212_1021 signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I 2106704 10934056 Nit79A3_1956 Nitrosomonas sp. Is79A3 signal peptidase I YP_004695153.1 2105901 R 261292 CDS YP_004695154.1 339483368 10934057 complement(2106701..2106796) 1 NC_015731.1 hypothetical protein 2106796 10934057 Nit79A3_1957 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695154.1 2106701 R 261292 CDS YP_004695155.1 339483369 10934058 complement(2106796..2108589) 1 NC_015731.1 TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; HAMAP: GTP-binding protein lepA; KEGG: nit:NAL212_1020 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; GTP-binding protein LepA 2108589 10934058 Nit79A3_1958 Nitrosomonas sp. Is79A3 GTP-binding protein LepA YP_004695155.1 2106796 R 261292 CDS YP_004695156.1 339483370 10934059 complement(2108691..2108981) 1 NC_015731.1 PFAM: Glutaredoxin 2; KEGG: nit:NAL212_1019 glutaredoxin 2; glutaredoxin 2 2108981 10934059 Nit79A3_1959 Nitrosomonas sp. Is79A3 glutaredoxin 2 YP_004695156.1 2108691 R 261292 CDS YP_004695157.1 339483371 10934060 complement(2108965..2110380) 1 NC_015731.1 TIGRFAM: Peptidase S1C, Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; KEGG: nit:NAL212_1018 protease Do; SMART: PDZ/DHR/GLGF; protease Do 2110380 10934060 Nit79A3_1960 Nitrosomonas sp. Is79A3 protease Do YP_004695157.1 2108965 R 261292 CDS YP_004695158.1 339483372 10934061 complement(2110622..2111626) 1 NC_015731.1 PFAM: MucB/RseB; KEGG: nit:NAL212_1017 sigma E regulatory protein, MucB/RseB; sigma E regulatory protein, MucB/RseB 2111626 10934061 Nit79A3_1961 Nitrosomonas sp. Is79A3 sigma E regulatory protein, MucB/RseB YP_004695158.1 2110622 R 261292 CDS YP_004695159.1 339483373 10934062 complement(2111623..2112171) 1 NC_015731.1 PFAM: Anti sigma-E protein RseA, N-terminal; KEGG: nit:NAL212_1016 anti sigma-E protein, RseA; Anti sigma-E protein RseA family protein 2112171 10934062 Nit79A3_1962 Nitrosomonas sp. Is79A3 Anti sigma-E protein RseA family protein YP_004695159.1 2111623 R 261292 CDS YP_004695160.1 339483374 10934063 complement(2112173..2112772) 1 NC_015731.1 KEGG: nit:NAL212_1015 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70 RpoE type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 2112772 10934063 Nit79A3_1963 Nitrosomonas sp. Is79A3 ECF subfamily RNA polymerase sigma-24 subunit YP_004695160.1 2112173 R 261292 CDS YP_004695161.1 339483375 10934064 2113049..2114647 1 NC_015731.1 KEGG: nit:NAL212_1014 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; L-aspartate oxidase 2114647 10934064 Nit79A3_1964 Nitrosomonas sp. Is79A3 L-aspartate oxidase YP_004695161.1 2113049 D 261292 CDS YP_004695162.1 339483376 10934065 2114819..2115331 1 NC_015731.1 PFAM: MEKHLA; KEGG: nit:NAL212_1013 MEKHLA domain-containing protein; MEKHLA domain-containing protein 2115331 10934065 Nit79A3_1965 Nitrosomonas sp. Is79A3 MEKHLA domain-containing protein YP_004695162.1 2114819 D 261292 CDS YP_004695163.1 339483377 10934067 2116316..2116537 1 NC_015731.1 hypothetical protein 2116537 10934067 Nit79A3_1966 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695163.1 2116316 D 261292 CDS YP_004695164.1 339483378 10934068 2116534..2116920 1 NC_015731.1 KEGG: gme:Gmet_1436 hypothetical protein; hypothetical protein 2116920 10934068 Nit79A3_1967 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695164.1 2116534 D 261292 CDS YP_004695165.1 339483379 10934070 complement(2118275..2118433) 1 NC_015731.1 hypothetical protein 2118433 10934070 Nit79A3_1969 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695165.1 2118275 R 261292 CDS YP_004695166.1 339483380 10934071 2118948..2120735 1 NC_015731.1 TIGRFAM: ATPase, K+ transporting, A subunit; HAMAP: ATPase, K+ transporting, A subunit; KEGG: dar:Daro_1087 potassium-transporting ATPase subunit A; PFAM: ATPase, K+ transporting, A subunit; Potassium-transporting ATPase A chain 2120735 10934071 Nit79A3_1970 Nitrosomonas sp. Is79A3 Potassium-transporting ATPase A chain YP_004695166.1 2118948 D 261292 CDS YP_004695167.1 339483381 10934072 2120751..2122814 1 NC_015731.1 TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; HAMAP: Potassium-transporting ATPase, B chain; KEGG: lhk:LHK_01573 K+transporting ATPase, B subunit; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; potassium-transporting ATPase subunit B 2122814 10934072 Nit79A3_1971 Nitrosomonas sp. Is79A3 potassium-transporting ATPase subunit B YP_004695167.1 2120751 D 261292 CDS YP_004695168.1 339483382 10934073 2122834..2123409 1 NC_015731.1 TIGRFAM: Potassium transporting ATPase, C subunit; HAMAP: Potassium transporting ATPase, C subunit; KEGG: dar:Daro_1085 potassium-transporting ATPase subunit C; PFAM: Potassium transporting ATPase, C subunit; potassium-transporting ATPase subunit C 2123409 10934073 Nit79A3_1972 Nitrosomonas sp. Is79A3 potassium-transporting ATPase subunit C YP_004695168.1 2122834 D 261292 CDS YP_004695169.1 339483383 10934074 2123409..2126078 1 NC_015731.1 KEGG: bph:Bphy_2054 osmosensitive K+ channel signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal; UspA; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; osmosensitive K+ channel signal transduction histidine kinase 2126078 10934074 Nit79A3_1973 Nitrosomonas sp. Is79A3 osmosensitive K+ channel signal transduction histidine kinase YP_004695169.1 2123409 D 261292 CDS YP_004695170.1 339483384 10934075 2126075..2126758 1 NC_015731.1 KEGG: bgl:bglu_1g26240 two component transcriptional regulator, winged helix family protein; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator 2126758 10934075 Nit79A3_1974 Nitrosomonas sp. Is79A3 winged helix family two component transcriptional regulator YP_004695170.1 2126075 D 261292 CDS YP_004695171.1 339483385 10934076 2126946..2128607 1 NC_015731.1 KEGG: dar:Daro_1624 hypothetical protein; hypothetical protein 2128607 10934076 Nit79A3_1975 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695171.1 2126946 D 261292 CDS YP_004695172.1 339483386 10934077 complement(2128650..2129195) 1 NC_015731.1 hypothetical protein 2129195 10934077 Nit79A3_1976 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695172.1 2128650 R 261292 CDS YP_004695173.1 339483387 10934079 complement(2131086..2131232) 1 NC_015731.1 KEGG: dar:Daro_2699 hypothetical protein; hypothetical protein 2131232 10934079 Nit79A3_1978 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695173.1 2131086 R 261292 CDS YP_004695174.1 339483388 10934080 complement(2132311..2133567) 1 NC_015731.1 PFAM: Integrase, catalytic core, phage; KEGG: dar:Daro_1675 phage integrase; integrase 2133567 10934080 Nit79A3_1979 Nitrosomonas sp. Is79A3 integrase YP_004695174.1 2132311 R 261292 CDS YP_004695175.1 339483389 10934081 complement(2133801..2134247) 1 NC_015731.1 KEGG: llo:LLO_1648 hypothetical protein; hypothetical protein 2134247 10934081 Nit79A3_1980 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695175.1 2133801 R 261292 CDS YP_004695176.1 339483390 10934082 complement(2134464..2135288) 1 NC_015731.1 KEGG: nit:NAL212_1329 hypothetical protein; hypothetical protein 2135288 10934082 Nit79A3_1981 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695176.1 2134464 R 261292 CDS YP_004695177.1 339483391 10934084 complement(2135807..2136745) 1 NC_015731.1 hypothetical protein 2136745 10934084 Nit79A3_1983 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695177.1 2135807 R 261292 CDS YP_004695178.1 339483392 10934085 complement(2136888..2137787) 1 NC_015731.1 TIGRFAM: SAICAR synthetase; HAMAP: Phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: nit:NAL212_1554 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; Phosphoribosylaminoimidazole-succinocarboxamide synthase 2137787 10934085 Nit79A3_1984 Nitrosomonas sp. Is79A3 Phosphoribosylaminoimidazole-succinocarboxamide synthase YP_004695178.1 2136888 R 261292 CDS YP_004695179.1 339483393 10934086 complement(2137792..2138931) 1 NC_015731.1 KEGG: nit:NAL212_1553 phosphoribosylaminoimidazole carboxylase, ATPase subunit; TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; phosphoribosylaminoimidazole carboxylase, ATPase subunit 2138931 10934086 Nit79A3_1985 Nitrosomonas sp. Is79A3 phosphoribosylaminoimidazole carboxylase, ATPase subunit YP_004695179.1 2137792 R 261292 CDS YP_004695180.1 339483394 10934087 complement(2138931..2139419) 1 NC_015731.1 KEGG: nit:NAL212_1552 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase, catalytic subunit 2139419 10934087 Nit79A3_1986 Nitrosomonas sp. Is79A3 phosphoribosylaminoimidazole carboxylase, catalytic subunit YP_004695180.1 2138931 R 261292 CDS YP_004695181.1 339483395 10934088 2139665..2140096 1 NC_015731.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: nit:NAL212_1551 biopolymer transport protein ExbD/TolR; Biopolymer transport protein ExbD/TolR 2140096 10934088 Nit79A3_1987 Nitrosomonas sp. Is79A3 Biopolymer transport protein ExbD/TolR YP_004695181.1 2139665 D 261292 CDS YP_004695182.1 339483396 10934089 2140172..2140813 1 NC_015731.1 PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; KEGG: nit:NAL212_1550 superoxide dismutase; Manganese/iron superoxide dismutase 2140813 10934089 Nit79A3_1988 Nitrosomonas sp. Is79A3 Manganese/iron superoxide dismutase YP_004695182.1 2140172 D 261292 CDS YP_004695183.1 339483397 10934090 2140825..2141469 1 NC_015731.1 TIGRFAM: ATP phosphoribosyltransferase, catalytic region; HAMAP: ATP phosphoribosyltransferase; KEGG: nit:NAL212_1549 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase, catalytic region; ATP phosphoribosyltransferase 2141469 10934090 Nit79A3_1989 Nitrosomonas sp. Is79A3 ATP phosphoribosyltransferase YP_004695183.1 2140825 D 261292 CDS YP_004695184.1 339483398 10934091 2141511..2142815 1 NC_015731.1 TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; HAMAP: Histidinol dehydrogenase, prokaryotic-type; KEGG: nit:NAL212_1548 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase, prokaryotic-type; Histidinol dehydrogenase 2142815 10934091 Nit79A3_1990 Nitrosomonas sp. Is79A3 Histidinol dehydrogenase YP_004695184.1 2141511 D 261292 CDS YP_004695185.1 339483399 10934092 2142865..2143689 1 NC_015731.1 PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: nit:NAL212_1547 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 2143689 10934092 Nit79A3_1991 Nitrosomonas sp. Is79A3 tRNA/rRNA methyltransferase SpoU YP_004695185.1 2142865 D 261292 CDS YP_004695186.1 339483400 10934093 2143741..2144088 1 NC_015731.1 KEGG: nit:NAL212_1546 hypothetical protein; hypothetical protein 2144088 10934093 Nit79A3_1992 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695186.1 2143741 D 261292 CDS YP_004695187.1 339483401 10934094 complement(2144095..2146158) 1 NC_015731.1 SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; TIGRFAM: Excinuclease ABC, B subunit; KEGG: nit:NAL212_1545 UvrABC system protein B; HAMAP: Excinuclease ABC, B subunit; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein; UvrABC system protein B 2146158 10934094 Nit79A3_1993 Nitrosomonas sp. Is79A3 UvrABC system protein B YP_004695187.1 2144095 R 261292 CDS YP_004695188.1 339483402 10934095 2146205..2147398 1 NC_015731.1 PFAM: Aminotransferase, class I/II; KEGG: nit:NAL212_1544 aspartate transaminase; class I and II aminotransferase 2147398 10934095 Nit79A3_1994 Nitrosomonas sp. Is79A3 class I and II aminotransferase YP_004695188.1 2146205 D 261292 CDS YP_004695189.1 339483403 10934096 complement(2147433..2147969) 1 NC_015731.1 PFAM: Flagellar transcriptional activator FlhC; KEGG: nit:NAL212_1543 flagellar transcriptional activator FlhC; flagellar transcriptional activator FlhC 2147969 10934096 Nit79A3_1995 Nitrosomonas sp. Is79A3 flagellar transcriptional activator FlhC YP_004695189.1 2147433 R 261292 CDS YP_004695190.1 339483404 10934098 complement(2148517..2150229) 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: net:Neut_2285 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; diguanylate cyclase/phosphodiesterase 2150229 10934098 Nit79A3_1997 Nitrosomonas sp. Is79A3 diguanylate cyclase/phosphodiesterase YP_004695190.1 2148517 R 261292 CDS YP_004695191.1 339483405 10934100 complement(2150716..2151804) 1 NC_015731.1 KEGG: meh:M301_2344 integrase; manually curated; PFAM: Integrase, catalytic core, phage; integrase 2151804 10934100 Nit79A3_1998 Nitrosomonas sp. Is79A3 integrase YP_004695191.1 2150716 R 261292 CDS YP_004695192.1 339483406 10934102 complement(2152019..2153401) 1 NC_015731.1 KEGG: nit:NAL212_0325 replication initiation factor; replication initiation factor 2153401 10934102 Nit79A3_2000 Nitrosomonas sp. Is79A3 replication initiation factor YP_004695192.1 2152019 R 261292 CDS YP_004695193.1 339483407 10934103 complement(2153507..2154343) 1 NC_015731.1 KEGG: dar:Daro_1040 hypothetical protein; hypothetical protein 2154343 10934103 Nit79A3_2001 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695193.1 2153507 R 261292 CDS YP_004695194.1 339483408 10934104 2154600..2157611 1 NC_015731.1 KEGG: dak:DaAHT2_2022 hypothetical protein; hypothetical protein 2157611 10934104 Nit79A3_2002 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695194.1 2154600 D 261292 CDS YP_004695195.1 339483409 10934105 complement(2157710..2158672) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 2158672 10934105 Nit79A3_2003 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695195.1 2157710 R 261292 CDS YP_004695196.1 339483410 10934106 2158675..2159562 1 NC_015731.1 KEGG: plt:Plut_1823 hypothetical protein; hypothetical protein 2159562 10934106 Nit79A3_2004 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695196.1 2158675 D 261292 CDS YP_004695197.1 339483411 10934107 2159584..2160144 1 NC_015731.1 hypothetical protein 2160144 10934107 Nit79A3_2005 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695197.1 2159584 D 261292 CDS YP_004695198.1 339483412 10934108 complement(2160334..2162532) 1 NC_015731.1 hypothetical protein 2162532 10934108 Nit79A3_2006 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695198.1 2160334 R 261292 CDS YP_004695199.1 339483413 10934109 complement(2162547..2162762) 1 NC_015731.1 manually curated; hypothetical protein 2162762 10934109 Nit79A3_2007 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695199.1 2162547 R 261292 CDS YP_004695200.1 339483414 10934110 complement(2163473..2163799) 1 NC_015731.1 TIGRFAM: Addiction module antidote protein, HI1420; KEGG: dpr:Despr_0176 addiction module antidote protein; addiction module antidote protein 2163799 10934110 Nit79A3_2008 Nitrosomonas sp. Is79A3 addiction module antidote protein YP_004695200.1 2163473 R 261292 CDS YP_004695201.1 339483415 10934111 complement(2163792..2164130) 1 NC_015731.1 KEGG: nit:NAL212_0344 addiction module killer protein; TIGRFAM: Addiction module killer protein, HI1419; PFAM: Protein of unknown function DUF891; addiction module killer protein 2164130 10934111 Nit79A3_2009 Nitrosomonas sp. Is79A3 addiction module killer protein YP_004695201.1 2163792 R 261292 CDS YP_004695202.1 339483416 10934114 complement(2165265..2166044) 1 NC_015731.1 SMART: Ribosomal RNA adenine methylase transferase, N-terminal; TIGRFAM: Ribosomal RNA adenine dimethylase; KEGG: nit:NAL212_0827 dimethyladenosine transferase; HAMAP: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine methylase transferase; Ribosomal RNA small subunit methyltransferase A 2166044 10934114 Nit79A3_2012 Nitrosomonas sp. Is79A3 Ribosomal RNA small subunit methyltransferase A YP_004695202.1 2165265 R 261292 CDS YP_004695203.1 339483417 10934115 complement(2166034..2167041) 1 NC_015731.1 TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; KEGG: nit:NAL212_0826 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 2167041 10934115 Nit79A3_2013 Nitrosomonas sp. Is79A3 4-hydroxythreonine-4-phosphate dehydrogenase YP_004695203.1 2166034 R 261292 CDS YP_004695204.1 339483418 10934116 complement(2167044..2168366) 1 NC_015731.1 KEGG: nit:NAL212_0825 SurA domain; HAMAP: Chaperone surA; PFAM: SurA N-terminal; Peptidyl-prolyl cis-trans isomerase, PpiC-type; Chaperone surA 2168366 10934116 Nit79A3_2014 Nitrosomonas sp. Is79A3 Chaperone surA YP_004695204.1 2167044 R 261292 CDS YP_004695205.1 339483419 10934117 complement(2168411..2170645) 1 NC_015731.1 KEGG: nit:NAL212_0824 organic solvent tolerance protein; HAMAP: LPS-assembly protein lptD; PFAM: Organic solvent tolerance protein; OstA-like protein; LPS-assembly protein lptD 2170645 10934117 Nit79A3_2015 Nitrosomonas sp. Is79A3 LPS-assembly protein lptD YP_004695205.1 2168411 R 261292 CDS YP_004695206.1 339483420 10934118 2171088..2171549 1 NC_015731.1 KEGG: nit:NAL212_2425 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: ISC system FeS cluster assembly, IscR transcription factor; Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2; BadM/Rrf2 family transcriptional regulator 2171549 10934118 Nit79A3_2016 Nitrosomonas sp. Is79A3 BadM/Rrf2 family transcriptional regulator YP_004695206.1 2171088 D 261292 CDS YP_004695207.1 339483421 10934119 2171751..2172101 1 NC_015731.1 KEGG: nit:NAL212_2424 iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; iron-sulfur cluster assembly accessory protein 2172101 10934119 Nit79A3_2017 Nitrosomonas sp. Is79A3 iron-sulfur cluster assembly accessory protein YP_004695207.1 2171751 D 261292 CDS YP_004695208.1 339483422 10934120 2172213..2173649 1 NC_015731.1 KEGG: nit:NAL212_2423 FeS assembly protein SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD; FeS assembly protein SufB 2173649 10934120 Nit79A3_2018 Nitrosomonas sp. Is79A3 FeS assembly protein SufB YP_004695208.1 2172213 D 261292 CDS YP_004695209.1 339483423 10934121 2173646..2174437 1 NC_015731.1 TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: nit:NAL212_2422 FeS assembly ATPase SufC; SMART: ATPase, AAA+ type, core; FeS assembly ATPase SufC 2174437 10934121 Nit79A3_2019 Nitrosomonas sp. Is79A3 FeS assembly ATPase SufC YP_004695209.1 2173646 D 261292 CDS YP_004695210.1 339483424 10934122 2174434..2175744 1 NC_015731.1 KEGG: nit:NAL212_2421 FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: SUF system FeS cluster assembly, SufBD; FeS assembly protein SufD 2175744 10934122 Nit79A3_2020 Nitrosomonas sp. Is79A3 FeS assembly protein SufD YP_004695210.1 2174434 D 261292 CDS YP_004695211.1 339483425 10934123 2175747..2177009 1 NC_015731.1 KEGG: nit:NAL212_2420 cysteine desulfurase, SufS subfamily; TIGRFAM: Cysteine desulfurase, SufS; PFAM: Aminotransferase, class V/Cysteine desulfurase; SufS subfamily cysteine desulfurase 2177009 10934123 Nit79A3_2021 Nitrosomonas sp. Is79A3 SufS subfamily cysteine desulfurase YP_004695211.1 2175747 D 261292 CDS YP_004695212.1 339483426 10934124 2177009..2177491 1 NC_015731.1 KEGG: nit:NAL212_2419 SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS cluster assembly, SufU scaffold; PFAM: NIF system FeS cluster assembly, NifU, N-terminal; SUF system FeS assembly protein, NifU family 2177491 10934124 Nit79A3_2022 Nitrosomonas sp. Is79A3 SUF system FeS assembly protein, NifU family YP_004695212.1 2177009 D 261292 CDS YP_004695213.1 339483427 10934125 2177620..2178180 1 NC_015731.1 PFAM: NIF system FeS cluster assembly, NifU-like scaffold, N-terminal; NIF system FeS cluster assembly, NifU, C-terminal; KEGG: nit:NAL212_2418 scaffold protein Nfu/NifU; Scaffold protein Nfu/NifU 2178180 10934125 Nit79A3_2023 Nitrosomonas sp. Is79A3 Scaffold protein Nfu/NifU YP_004695213.1 2177620 D 261292 CDS YP_004695214.1 339483428 10934126 complement(2178229..2178792) 1 NC_015731.1 TIGRFAM: Translation elongation factor P; HAMAP: Translation elongation factor P; KEGG: nit:NAL212_2417 translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor P/YeiP, central; Translation elongation factor, KOW-like; Elongation factor P 2178792 10934126 Nit79A3_2024 Nitrosomonas sp. Is79A3 Elongation factor P YP_004695214.1 2178229 R 261292 CDS YP_004695215.1 339483429 10934127 complement(2178871..2180007) 1 NC_015731.1 PFAM: Uncharacterised conserved protein UCP015557; KEGG: nit:NAL212_2416 hypothetical protein; hypothetical protein 2180007 10934127 Nit79A3_2025 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695215.1 2178871 R 261292 CDS YP_004695216.1 339483430 10934128 complement(2180102..2180884) 1 NC_015731.1 KEGG: nit:NAL212_2415 hypothetical protein; hypothetical protein 2180884 10934128 Nit79A3_2026 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695216.1 2180102 R 261292 CDS YP_004695217.1 339483431 10934129 complement(2180976..2181422) 1 NC_015731.1 PFAM: UspA; KEGG: nmu:Nmul_A0904 hypothetical protein; UspA domain-containing protein 2181422 10934129 Nit79A3_2027 Nitrosomonas sp. Is79A3 UspA domain-containing protein YP_004695217.1 2180976 R 261292 CDS YP_004695218.1 339483432 10934130 2181823..2182650 1 NC_015731.1 PFAM: SH3, type 3; KEGG: nit:NAL212_2226 SH3 type 3 domain-containing protein; SH3 type 3 domain-containing protein 2182650 10934130 Nit79A3_2028 Nitrosomonas sp. Is79A3 SH3 type 3 domain-containing protein YP_004695218.1 2181823 D 261292 CDS YP_004695219.1 339483433 10934131 complement(2182657..2184279) 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; HAMP linker domain; KEGG: nit:NAL212_2227 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; HAMP linker domain; diguanylate cyclase 2184279 10934131 Nit79A3_2029 Nitrosomonas sp. Is79A3 diguanylate cyclase YP_004695219.1 2182657 R 261292 CDS YP_004695220.1 339483434 10934132 complement(2184342..2184746) 1 NC_015731.1 PFAM: Globin, truncated bacterial-like; KEGG: nit:NAL212_2228 globin; globin 2184746 10934132 Nit79A3_2030 Nitrosomonas sp. Is79A3 globin YP_004695220.1 2184342 R 261292 CDS YP_004695221.1 339483435 10934133 2184962..2186611 1 NC_015731.1 PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; KEGG: nit:NAL212_2229 malic protein NAD-binding protein; malic protein NAD-binding protein 2186611 10934133 Nit79A3_2031 Nitrosomonas sp. Is79A3 malic protein NAD-binding protein YP_004695221.1 2184962 D 261292 CDS YP_004695222.1 339483436 10934134 complement(2186644..2187474) 1 NC_015731.1 KEGG: nit:NAL212_2230 phosphoserine phosphatase SerB; TIGRFAM: Phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB, PSPase-like; PFAM: Haloacid dehalogenase-like hydrolase; phosphoserine phosphatase SerB 2187474 10934134 Nit79A3_2032 Nitrosomonas sp. Is79A3 phosphoserine phosphatase SerB YP_004695222.1 2186644 R 261292 CDS YP_004695223.1 339483437 10934135 complement(2187523..2188986) 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Metal-dependent hydrolase HDOD; KEGG: nit:NAL212_2231 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 2188986 10934135 Nit79A3_2033 Nitrosomonas sp. Is79A3 diguanylate cyclase YP_004695223.1 2187523 R 261292 CDS YP_004695224.1 339483438 10934136 2189296..2190792 1 NC_015731.1 KEGG: nit:NAL212_2232 cytosol aminopeptidase; HAMAP: cytosol aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal; cytosol aminopeptidase 2190792 10934136 Nit79A3_2034 Nitrosomonas sp. Is79A3 cytosol aminopeptidase YP_004695224.1 2189296 D 261292 CDS YP_004695225.1 339483439 10934137 2190936..2191358 1 NC_015731.1 PFAM: DNA polymerase III chi subunit, HolC; KEGG: nit:NAL212_2233 DNA polymerase III chi subunit HolC; DNA polymerase III chi subunit HolC 2191358 10934137 Nit79A3_2035 Nitrosomonas sp. Is79A3 DNA polymerase III chi subunit HolC YP_004695225.1 2190936 D 261292 CDS YP_004695226.1 339483440 10934138 2191379..2191738 1 NC_015731.1 KEGG: nit:NAL212_2234 hypothetical protein; hypothetical protein 2191738 10934138 Nit79A3_2036 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695226.1 2191379 D 261292 CDS YP_004695227.1 339483441 10934139 2191852..2194671 1 NC_015731.1 TIGRFAM: Valyl-tRNA synthetase, class Ia; HAMAP: Valyl-tRNA synthetase; KEGG: nit:NAL212_2235 valyl-tRNA synthetase; valyl-tRNA synthetase 2194671 10934139 Nit79A3_2037 Nitrosomonas sp. Is79A3 valyl-tRNA synthetase YP_004695227.1 2191852 D 261292 CDS YP_004695228.1 339483442 10934140 complement(2194781..2195416) 1 NC_015731.1 KEGG: mep:MPQ_2006 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 2195416 10934140 Nit79A3_2038 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004695228.1 2194781 R 261292 CDS YP_004695229.1 339483443 10934141 2195770..2195943 1 NC_015731.1 hypothetical protein 2195943 10934141 Nit79A3_2039 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695229.1 2195770 D 261292 CDS YP_004695230.1 339483444 10934142 2196501..2197847 1 NC_015731.1 PFAM: Integrase, catalytic core, phage; KEGG: nit:NAL212_3061 integrase; integrase 2197847 10934142 Nit79A3_2040 Nitrosomonas sp. Is79A3 integrase YP_004695230.1 2196501 D 261292 CDS YP_004695231.1 339483445 10934143 2197934..2198386 1 NC_015731.1 hypothetical protein 2198386 10934143 Nit79A3_2041 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695231.1 2197934 D 261292 CDS YP_004695232.1 339483446 10934144 2198490..2199155 1 NC_015731.1 KEGG: nit:NAL212_3063 hypothetical protein; hypothetical protein 2199155 10934144 Nit79A3_2042 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695232.1 2198490 D 261292 CDS YP_004695233.1 339483447 10934145 2199314..2199565 1 NC_015731.1 KEGG: ajs:Ajs_3336 hypothetical protein; hypothetical protein 2199565 10934145 Nit79A3_2043 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695233.1 2199314 D 261292 CDS YP_004695234.1 339483448 10934146 2199606..2199764 1 NC_015731.1 hypothetical protein 2199764 10934146 Nit79A3_2044 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695234.1 2199606 D 261292 CDS YP_004695235.1 339483449 10934147 2200218..2200574 1 NC_015731.1 KEGG: nit:NAL212_3066 hypothetical protein; hypothetical protein 2200574 10934147 Nit79A3_2045 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695235.1 2200218 D 261292 CDS YP_004695236.1 339483450 10934148 2200571..2201059 1 NC_015731.1 KEGG: rsc:RCFBP_11467 DNA primase-like protein; DNA primase-like protein 2201059 10934148 Nit79A3_2046 Nitrosomonas sp. Is79A3 DNA primase-like protein YP_004695236.1 2200571 D 261292 CDS YP_004695237.1 339483451 10934149 2201111..2202145 1 NC_015731.1 KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase 2202145 10934149 Nit79A3_2047 Nitrosomonas sp. Is79A3 isxo7 transposase YP_004695237.1 2201111 D 261292 CDS YP_004695238.1 339483452 10934150 2202155..2203237 1 NC_015731.1 KEGG: rsc:RCFBP_11467 DNA primase-like protein; DNA primase-like protein 2203237 10934150 Nit79A3_2048 Nitrosomonas sp. Is79A3 DNA primase-like protein YP_004695238.1 2202155 D 261292 CDS YP_004695239.1 339483453 10934151 2203241..2203606 1 NC_015731.1 KEGG: nit:NAL212_3069 hypothetical protein; hypothetical protein 2203606 10934151 Nit79A3_2049 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695239.1 2203241 D 261292 CDS YP_004695240.1 339483454 10934152 2203729..2204262 1 NC_015731.1 KEGG: nit:NAL212_3071 hypothetical protein; hypothetical protein 2204262 10934152 Nit79A3_2050 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695240.1 2203729 D 261292 CDS YP_004695241.1 339483455 10934153 2204371..2204562 1 NC_015731.1 KEGG: nit:NAL212_3072 hypothetical protein; hypothetical protein 2204562 10934153 Nit79A3_2051 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695241.1 2204371 D 261292 CDS YP_004695242.1 339483456 10934154 2204920..2205162 1 NC_015731.1 hypothetical protein 2205162 10934154 Nit79A3_2052 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695242.1 2204920 D 261292 CDS YP_004695243.1 339483457 10934156 complement(2205469..2206335) 1 NC_015731.1 KEGG: nit:NAL212_2461 RIO-like kinase; PFAM: RIO-like kinase; SMART: RIO kinase; RIO-like kinase 2206335 10934156 Nit79A3_2053 Nitrosomonas sp. Is79A3 RIO-like kinase YP_004695243.1 2205469 R 261292 CDS YP_004695244.1 339483458 10934157 2206884..2208032 1 NC_015731.1 KEGG: nit:NAL212_2460 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 2208032 10934157 Nit79A3_2054 Nitrosomonas sp. Is79A3 metal dependent phosphohydrolase YP_004695244.1 2206884 D 261292 CDS YP_004695245.1 339483459 10934158 complement(2208054..2209301) 1 NC_015731.1 PFAM: Sodium:dicarboxylate symporter; KEGG: nit:NAL212_2459 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 2209301 10934158 Nit79A3_2055 Nitrosomonas sp. Is79A3 sodium:dicarboxylate symporter YP_004695245.1 2208054 R 261292 CDS YP_004695246.1 339483460 10934159 complement(2209351..2210247) 1 NC_015731.1 KEGG: nit:NAL212_2458 coproporphyrinogen oxidase; HAMAP: Coproporphyrinogen-III oxidase, aerobic; PFAM: Coproporphyrinogen III oxidase; Coproporphyrinogen-III oxidase, aerobic 2210247 10934159 Nit79A3_2056 Nitrosomonas sp. Is79A3 Coproporphyrinogen-III oxidase, aerobic YP_004695246.1 2209351 R 261292 CDS YP_004695247.1 339483461 10934160 complement(2210307..2210426) 1 NC_015731.1 hypothetical protein 2210426 10934160 Nit79A3_2057 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695247.1 2210307 R 261292 CDS YP_004695248.1 339483462 10934161 2210584..2211759 1 NC_015731.1 KEGG: nit:NAL212_0953 chorismate synthase; TIGRFAM: Chorismate synthase; PFAM: Chorismate synthase; chorismate synthase 2211759 10934161 Nit79A3_2058 Nitrosomonas sp. Is79A3 chorismate synthase YP_004695248.1 2210584 D 261292 CDS YP_004695249.1 339483463 10934162 2211855..2212970 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein 2212970 10934162 Nit79A3_2059 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695249.1 2211855 D 261292 CDS YP_004695250.1 339483464 10934165 complement(2213573..2213836) 1 NC_015731.1 KEGG: nit:NAL212_3141 hypothetical protein; hypothetical protein 2213836 10934165 Nit79A3_2060 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695250.1 2213573 R 261292 CDS YP_004695251.1 339483465 10934166 complement(2214426..2214953) 1 NC_015731.1 KEGG: nit:NAL212_1959 hypothetical protein; hypothetical protein 2214953 10934166 Nit79A3_2061 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695251.1 2214426 R 261292 CDS YP_004695252.1 339483466 10934167 complement(2215090..2215323) 1 NC_015731.1 KEGG: nit:NAL212_3070 hypothetical protein; hypothetical protein 2215323 10934167 Nit79A3_2062 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695252.1 2215090 R 261292 CDS YP_004695253.1 339483467 10934169 2216235..2216813 1 NC_015731.1 PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; KEGG: app:CAP2UW1_0999 hydrogen dehydrogenase; NADH ubiquinone oxidoreductase 20 kDa subunit 2216813 10934169 Nit79A3_2064 Nitrosomonas sp. Is79A3 NADH ubiquinone oxidoreductase 20 kDa subunit YP_004695253.1 2216235 D 261292 CDS YP_004695254.1 339483468 10934170 2216819..2218294 1 NC_015731.1 PFAM: Nickel-dependent hydrogenase, large subunit; KEGG: mca:MCA0114 NAD-reducing hydrogenase, beta subunit; nickel-dependent hydrogenase large subunit 2218294 10934170 Nit79A3_2065 Nitrosomonas sp. Is79A3 nickel-dependent hydrogenase large subunit YP_004695254.1 2216819 D 261292 CDS YP_004695255.1 339483469 10934171 2218481..2219467 1 NC_015731.1 KEGG: amr:AM1_2585 hypothetical protein; hypothetical protein 2219467 10934171 Nit79A3_2066 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695255.1 2218481 D 261292 CDS YP_004695256.1 339483470 10934172 2219436..2219600 1 NC_015731.1 hypothetical protein 2219600 10934172 Nit79A3_2067 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695256.1 2219436 D 261292 CDS YP_004695257.1 339483471 10934173 complement(2219706..2219906) 1 NC_015731.1 KEGG: nit:NAL212_0888 hypothetical protein; hypothetical protein 2219906 10934173 Nit79A3_2068 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695257.1 2219706 R 261292 CDS YP_004695258.1 339483472 10934174 complement(2219947..2220462) 1 NC_015731.1 PFAM: Lipocalin-like; KEGG: nit:NAL212_0887 lipocalin family protein; Lipocalin family protein 2220462 10934174 Nit79A3_2069 Nitrosomonas sp. Is79A3 Lipocalin family protein YP_004695258.1 2219947 R 261292 CDS YP_004695259.1 339483473 10934176 2221798..2222016 1 NC_015731.1 KEGG: nit:NAL212_0884 hypothetical protein; hypothetical protein 2222016 10934176 Nit79A3_2071 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695259.1 2221798 D 261292 CDS YP_004695260.1 339483474 10934177 2222106..2222324 1 NC_015731.1 KEGG: nit:NAL212_0884 hypothetical protein; hypothetical protein 2222324 10934177 Nit79A3_2072 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695260.1 2222106 D 261292 CDS YP_004695261.1 339483475 10934178 complement(2222436..2223404) 1 NC_015731.1 KEGG: nit:NAL212_0883 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein 2223404 10934178 Nit79A3_2073 Nitrosomonas sp. Is79A3 beta-lactamase domain-containing protein YP_004695261.1 2222436 R 261292 CDS YP_004695262.1 339483476 10934179 complement(2223454..2225424) 1 NC_015731.1 TIGRFAM: Acetate--CoA ligase; HAMAP: Acetyl-coenzyme A synthetase; KEGG: nit:NAL212_0882 acetate/CoA ligase; PFAM: AMP-dependent synthetase/ligase; Acetyl-coenzyme A synthetase 2225424 10934179 Nit79A3_2074 Nitrosomonas sp. Is79A3 Acetyl-coenzyme A synthetase YP_004695262.1 2223454 R 261292 CDS YP_004695263.1 339483477 10934180 2225637..2226122 1 NC_015731.1 KEGG: nit:NAL212_0881 hypothetical protein; HAMAP: Uncharacterised protein family UPF0090, bacteria; PFAM: Uncharacterised protein family UPF0090; Ribosome maturation factor rimP 2226122 10934180 Nit79A3_2075 Nitrosomonas sp. Is79A3 Ribosome maturation factor rimP YP_004695263.1 2225637 D 261292 CDS YP_004695264.1 339483478 10934181 2226149..2227621 1 NC_015731.1 KEGG: nit:NAL212_0880 NusA antitermination factor; TIGRFAM: Transcription termination factor NusA; Transcription termination factor NusA, C-terminal duplication; PFAM: Transcription factor NusA, N-terminal; Ribosomal protein S1, RNA binding domain; NusA antitermination factor 2227621 10934181 Nit79A3_2076 Nitrosomonas sp. Is79A3 NusA antitermination factor YP_004695264.1 2226149 D 261292 CDS YP_004695265.1 339483479 10934182 2227703..2230351 1 NC_015731.1 KEGG: nit:NAL212_0879 translation initiation factor IF-2; TIGRFAM: Initiation factor 2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Initiation factor 2 associated region, bacterial; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; translation initiation factor IF-2 2230351 10934182 Nit79A3_2077 Nitrosomonas sp. Is79A3 translation initiation factor IF-2 YP_004695265.1 2227703 D 261292 CDS YP_004695266.1 339483480 10934183 2230379..2230771 1 NC_015731.1 TIGRFAM: Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; KEGG: nit:NAL212_0878 ribosome-binding factor A; PFAM: Ribosome-binding factor A; Ribosome-binding factor A 2230771 10934183 Nit79A3_2078 Nitrosomonas sp. Is79A3 Ribosome-binding factor A YP_004695266.1 2230379 D 261292 CDS YP_004695267.1 339483481 10934184 2230784..2231755 1 NC_015731.1 TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: nit:NAL212_0877 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; Pseudouridine synthase II, TruB, subfamily 1, C-terminal, bacterial-type; tRNA pseudouridine synthase B 2231755 10934184 Nit79A3_2079 Nitrosomonas sp. Is79A3 tRNA pseudouridine synthase B YP_004695267.1 2230784 D 261292 CDS YP_004695268.1 339483482 10934185 complement(2231841..2232185) 1 NC_015731.1 PFAM: Protein of unknown function DUF486; KEGG: nit:NAL212_0823 hypothetical protein; hypothetical protein 2232185 10934185 Nit79A3_2080 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695268.1 2231841 R 261292 CDS YP_004695269.1 339483483 10934186 complement(2232190..2232429) 1 NC_015731.1 hypothetical protein 2232429 10934186 Nit79A3_2081 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695269.1 2232190 R 261292 CDS YP_004695270.1 339483484 10934187 complement(2232530..2233993) 1 NC_015731.1 TIGRFAM: Carboxylyase-related; HAMAP: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; KEGG: nit:NAL212_0822 UbiD family decarboxylase; PFAM: Carboxylyase-related; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2233993 10934187 Nit79A3_2082 Nitrosomonas sp. Is79A3 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_004695270.1 2232530 R 261292 CDS YP_004695271.1 339483485 10934188 complement(2234005..2234874) 1 NC_015731.1 TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; HAMAP: 4-hydroxybenzoate octaprenyltransferase; KEGG: nit:NAL212_0821 4-hydroxybenzoate octaprenyltransferase; PFAM: UbiA prenyltransferase; 4-hydroxybenzoate octaprenyltransferase 2234874 10934188 Nit79A3_2083 Nitrosomonas sp. Is79A3 4-hydroxybenzoate octaprenyltransferase YP_004695271.1 2234005 R 261292 CDS YP_004695272.1 339483486 10934189 complement(2234871..2235413) 1 NC_015731.1 KEGG: nit:NAL212_0820 chorismate--pyruvate lyase; HAMAP: Chorismate--pyruvate lyase; PFAM: Chorismate--pyruvate lyase; chorismate--pyruvate lyase 2235413 10934189 Nit79A3_2084 Nitrosomonas sp. Is79A3 chorismate--pyruvate lyase YP_004695272.1 2234871 R 261292 CDS YP_004695273.1 339483487 10934190 complement(2235687..2236187) 1 NC_015731.1 hypothetical protein 2236187 10934190 Nit79A3_2085 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695273.1 2235687 R 261292 CDS YP_004695274.1 339483488 10934191 complement(2236411..2237280) 1 NC_015731.1 KEGG: pcr:Pcryo_1229 hypothetical protein; hypothetical protein 2237280 10934191 Nit79A3_2086 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695274.1 2236411 R 261292 CDS YP_004695275.1 339483489 10934192 complement(2237416..2239455) 1 NC_015731.1 TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: nit:NAL212_1861 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; ATP-dependent DNA helicase RecG 2239455 10934192 Nit79A3_2087 Nitrosomonas sp. Is79A3 ATP-dependent DNA helicase RecG YP_004695275.1 2237416 R 261292 CDS YP_004695276.1 339483490 10934193 complement(2239498..2239887) 1 NC_015731.1 KEGG: nit:NAL212_1860 endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 2239887 10934193 Nit79A3_2088 Nitrosomonas sp. Is79A3 endoribonuclease L-PSP YP_004695276.1 2239498 R 261292 CDS YP_004695277.1 339483491 10934194 2240078..2241331 1 NC_015731.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: nit:NAL212_1859 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2241331 10934194 Nit79A3_2089 Nitrosomonas sp. Is79A3 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_004695277.1 2240078 D 261292 CDS YP_004695278.1 339483492 10934195 complement(2241420..2242034) 1 NC_015731.1 KEGG: nit:NAL212_1858 hypothetical protein; hypothetical protein 2242034 10934195 Nit79A3_2090 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695278.1 2241420 R 261292 CDS YP_004695279.1 339483493 10934196 2242369..2243829 1 NC_015731.1 TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: nit:NAL212_1857 argininosuccinate lyase; PFAM: Fumarate lyase; Argininosuccinate lyase 2243829 10934196 Nit79A3_2091 Nitrosomonas sp. Is79A3 Argininosuccinate lyase YP_004695279.1 2242369 D 261292 CDS YP_004695280.1 339483494 10934197 2243866..2244750 1 NC_015731.1 PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: nit:NAL212_1856 fructosamine/ketosamine-3-kinase; Fructosamine/Ketosamine-3-kinase 2244750 10934197 Nit79A3_2092 Nitrosomonas sp. Is79A3 Fructosamine/Ketosamine-3-kinase YP_004695280.1 2243866 D 261292 CDS YP_004695281.1 339483495 10934198 2244840..2246516 1 NC_015731.1 TIGRFAM: CTP synthase; HAMAP: CTP synthase; KEGG: nit:NAL212_1855 CTP synthase; PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; CTP synthase 2246516 10934198 Nit79A3_2093 Nitrosomonas sp. Is79A3 CTP synthase YP_004695281.1 2244840 D 261292 CDS YP_004695282.1 339483496 10934199 2246582..2247865 1 NC_015731.1 TIGRFAM: Enolase; HAMAP: Enolase; KEGG: nit:NAL212_1854 enolase; PFAM: Enolase, C-terminal; Enolase, N-terminal; enolase 2247865 10934199 Nit79A3_2094 Nitrosomonas sp. Is79A3 enolase YP_004695282.1 2246582 D 261292 CDS YP_004695283.1 339483497 10934200 2247865..2248158 1 NC_015731.1 KEGG: nit:NAL212_1853 septum formation initiator; HAMAP: Cell division protein ftsB-like protein; PFAM: Septum formation initiator; Cell division protein ftsB-like protein 2248158 10934200 Nit79A3_2095 Nitrosomonas sp. Is79A3 Cell division protein ftsB-like protein YP_004695283.1 2247865 D 261292 CDS YP_004695284.1 339483498 10934201 2248403..2249284 1 NC_015731.1 HAMAP: protease htpX; KEGG: nit:NAL212_1852 peptidase M48 Ste24p; protease htpX 2249284 10934201 Nit79A3_2096 Nitrosomonas sp. Is79A3 protease htpX YP_004695284.1 2248403 D 261292 CDS YP_004695285.1 339483499 10934202 complement(2249379..2249723) 1 NC_015731.1 KEGG: nit:NAL212_1851 hypothetical protein; hypothetical protein 2249723 10934202 Nit79A3_2097 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695285.1 2249379 R 261292 CDS YP_004695286.1 339483500 10934203 2250046..2251329 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: tkm:TK90_1372 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase 2251329 10934203 Nit79A3_2098 Nitrosomonas sp. Is79A3 response regulator receiver modulated diguanylate cyclase YP_004695286.1 2250046 D 261292 CDS YP_004695287.1 339483501 10934204 complement(2251355..2253112) 1 NC_015731.1 KEGG: nit:NAL212_0404 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 2253112 10934204 Nit79A3_2099 Nitrosomonas sp. Is79A3 phospholipid/glycerol acyltransferase YP_004695287.1 2251355 R 261292 CDS YP_004695288.1 339483502 10934205 2253369..2253662 1 NC_015731.1 hypothetical protein 2253662 10934205 Nit79A3_2100 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695288.1 2253369 D 261292 CDS YP_004695289.1 339483503 10934206 2253883..2254071 1 NC_015731.1 PFAM: YcfA-like; KEGG: nhl:Nhal_0117 YcfA family protein; hypothetical protein 2254071 10934206 Nit79A3_2101 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695289.1 2253883 D 261292 CDS YP_004695290.1 339483504 10934207 2254075..2254287 1 NC_015731.1 PFAM: Uncharacterised protein family UPF0150; KEGG: alv:Alvin_0648 hypothetical protein; hypothetical protein 2254287 10934207 Nit79A3_2102 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695290.1 2254075 D 261292 CDS YP_004695291.1 339483505 10934208 complement(2254365..2255117) 1 NC_015731.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: nit:NAL212_0398 alpha/beta hydrolase fold protein; alpha/beta hydrolase 2255117 10934208 Nit79A3_2103 Nitrosomonas sp. Is79A3 alpha/beta hydrolase YP_004695291.1 2254365 R 261292 CDS YP_004695292.1 339483506 10934209 complement(2255114..2256142) 1 NC_015731.1 PFAM: Peptidase M14, carboxypeptidase A; KEGG: hch:HCH_05013 zinc carboxypeptidase-related protein; peptidase M14 carboxypeptidase A 2256142 10934209 Nit79A3_2104 Nitrosomonas sp. Is79A3 peptidase M14 carboxypeptidase A YP_004695292.1 2255114 R 261292 CDS YP_004695293.1 339483507 10934210 2256353..2257162 1 NC_015731.1 PFAM: Metallophosphoesterase; KEGG: nit:NAL212_0396 metallophosphoesterase; metallophosphoesterase 2257162 10934210 Nit79A3_2105 Nitrosomonas sp. Is79A3 metallophosphoesterase YP_004695293.1 2256353 D 261292 CDS YP_004695294.1 339483508 10934211 2257169..2258092 1 NC_015731.1 PFAM: Patatin; KEGG: nit:NAL212_0395 patatin; Patatin 2258092 10934211 Nit79A3_2106 Nitrosomonas sp. Is79A3 Patatin YP_004695294.1 2257169 D 261292 CDS YP_004695295.1 339483509 10934212 2258382..2259425 1 NC_015731.1 TIGRFAM: Conserved hypothetical protein CHP00661; KEGG: nit:NAL212_0394 hypothetical protein; hypothetical protein 2259425 10934212 Nit79A3_2107 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695295.1 2258382 D 261292 CDS YP_004695296.1 339483510 10934213 2259496..2260500 1 NC_015731.1 PFAM: Diacylglycerol kinase, catalytic region; KEGG: nit:NAL212_0393 diacylglycerol kinase catalytic region; diacylglycerol kinase catalytic region 2260500 10934213 Nit79A3_2108 Nitrosomonas sp. Is79A3 diacylglycerol kinase catalytic region YP_004695296.1 2259496 D 261292 CDS YP_004695297.1 339483511 10934214 2260884..2261708 1 NC_015731.1 KEGG: gvi:glr1903 hypothetical protein; hypothetical protein 2261708 10934214 Nit79A3_2109 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695297.1 2260884 D 261292 CDS YP_004695298.1 339483512 10934215 2261720..2262634 1 NC_015731.1 KEGG: pbr:PB2503_07444 hypothetical protein; hypothetical protein 2262634 10934215 Nit79A3_2110 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695298.1 2261720 D 261292 CDS YP_004695299.1 339483513 10934216 2262665..2263075 1 NC_015731.1 hypothetical protein 2263075 10934216 Nit79A3_2111 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695299.1 2262665 D 261292 CDS YP_004695300.1 339483514 10934217 2263280..2263438 1 NC_015731.1 KEGG: nit:NAL212_0847 34 kDa membrane antigen; hypothetical protein 2263438 10934217 Nit79A3_2112 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695300.1 2263280 D 261292 CDS YP_004695301.1 339483515 10934218 complement(2263595..2264896) 1 NC_015731.1 PFAM: Major facilitator superfamily MFS-1; KEGG: nit:NAL212_2498 major facilitator transporter; major facilitator superfamily protein 2264896 10934218 Nit79A3_2113 Nitrosomonas sp. Is79A3 major facilitator superfamily protein YP_004695301.1 2263595 R 261292 CDS YP_004695302.1 339483516 10934219 complement(2264931..2266316) 1 NC_015731.1 TIGRFAM: Fumarate hydratase, class II; HAMAP: Fumarate hydratase class II; KEGG: nit:NAL212_2499 fumarate hydratase, class II; PFAM: Fumarate lyase; Fumarase C, C-terminal; Fumarate hydratase class II 2266316 10934219 Nit79A3_2114 Nitrosomonas sp. Is79A3 Fumarate hydratase class II YP_004695302.1 2264931 R 261292 CDS YP_004695303.1 339483517 10934220 complement(2266399..2266731) 1 NC_015731.1 KEGG: nit:NAL212_2500 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 2266731 10934220 Nit79A3_2115 Nitrosomonas sp. Is79A3 helix-turn-helix domain-containing protein YP_004695303.1 2266399 R 261292 CDS YP_004695304.1 339483518 10934221 complement(2266715..2266972) 1 NC_015731.1 PFAM: Plasmid stabilisation system; KEGG: nit:NAL212_2501 plasmid stabilization system; plasmid stabilization system 2266972 10934221 Nit79A3_2116 Nitrosomonas sp. Is79A3 plasmid stabilization system YP_004695304.1 2266715 R 261292 CDS YP_004695305.1 339483519 10934223 complement(2267578..2267760) 1 NC_015731.1 KEGG: eca:ECA2896 hypothetical protein; hypothetical protein 2267760 10934223 Nit79A3_2118 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695305.1 2267578 R 261292 CDS YP_004695306.1 339483520 10934224 complement(2267868..2268545) 1 NC_015731.1 KEGG: cpc:Cpar_1103 hypothetical protein; hypothetical protein 2268545 10934224 Nit79A3_2119 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695306.1 2267868 R 261292 CDS YP_004695307.1 339483521 10934225 complement(2268629..2269825) 1 NC_015731.1 PFAM: Ribonucleotide reductase; KEGG: nit:NAL212_2505 ribonucleoside-diphosphate reductase; ribonucleotide reductase 2269825 10934225 Nit79A3_2120 Nitrosomonas sp. Is79A3 ribonucleotide reductase YP_004695307.1 2268629 R 261292 CDS YP_004695308.1 339483522 10934226 complement(2269860..2272724) 1 NC_015731.1 KEGG: nit:NAL212_2506 ribonucleoside-diphosphate reductase, alpha subunit; TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ATP-cone; ribonucleoside-diphosphate reductase subunit alpha 2272724 10934226 Nit79A3_2121 Nitrosomonas sp. Is79A3 ribonucleoside-diphosphate reductase subunit alpha YP_004695308.1 2269860 R 261292 CDS YP_004695309.1 339483523 10934227 complement(2273383..2274174) 1 NC_015731.1 PFAM: Carbonic anhydrase, alpha-class, catalytic domain; KEGG: nit:NAL212_1475 carbonate dehydratase; carbonic anhydrase 2274174 10934227 Nit79A3_2122 Nitrosomonas sp. Is79A3 carbonic anhydrase YP_004695309.1 2273383 R 261292 CDS YP_004695310.1 339483524 10934228 complement(2274214..2274450) 1 NC_015731.1 KEGG: nit:NAL212_1476 hypothetical protein; hypothetical protein 2274450 10934228 Nit79A3_2123 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695310.1 2274214 R 261292 CDS YP_004695311.1 339483525 10934229 complement(2274603..2275775) 1 NC_015731.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: nit:NAL212_0930 ornithine decarboxylase; Orn/DAP/Arg decarboxylase 2 2275775 10934229 Nit79A3_2124 Nitrosomonas sp. Is79A3 Orn/DAP/Arg decarboxylase 2 YP_004695311.1 2274603 R 261292 CDS YP_004695312.1 339483526 10934230 complement(2275961..2276293) 1 NC_015731.1 KEGG: nit:NAL212_2551 hypothetical protein; hypothetical protein 2276293 10934230 Nit79A3_2125 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695312.1 2275961 R 261292 CDS YP_004695313.1 339483527 10934231 2276799..2277089 1 NC_015731.1 KEGG: nit:NAL212_2553 hypothetical protein; hypothetical protein 2277089 10934231 Nit79A3_2126 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695313.1 2276799 D 261292 CDS YP_004695314.1 339483528 10934232 complement(2277739..2279124) 1 NC_015731.1 KEGG: dar:Daro_2081 phospholipase D/transphosphatidylase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; phospholipase D/Transphosphatidylase 2279124 10934232 Nit79A3_2127 Nitrosomonas sp. Is79A3 phospholipase D/Transphosphatidylase YP_004695314.1 2277739 R 261292 CDS YP_004695315.1 339483529 10934233 2279559..2279996 1 NC_015731.1 PFAM: Collagen-binding surface protein Cna-like, B region; KEGG: nmu:Nmul_A1517 hypothetical protein; Cna B domain-containing protein 2279996 10934233 Nit79A3_2128 Nitrosomonas sp. Is79A3 Cna B domain-containing protein YP_004695315.1 2279559 D 261292 CDS YP_004695316.1 339483530 10934235 complement(2280484..2280681) 1 NC_015731.1 hypothetical protein 2280681 10934235 Nit79A3_2130 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695316.1 2280484 R 261292 CDS YP_004695317.1 339483531 10934236 complement(2280931..2282706) 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: dar:Daro_1362 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2282706 10934236 Nit79A3_2131 Nitrosomonas sp. Is79A3 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004695317.1 2280931 R 261292 CDS YP_004695318.1 339483532 10934237 2283034..2283513 1 NC_015731.1 PFAM: ABC transporter-like; KEGG: nmu:Nmul_A0982 spermidine/putrescine ABC transporter ATP-binding subunit; ABC transporter 2283513 10934237 Nit79A3_2132 Nitrosomonas sp. Is79A3 ABC transporter YP_004695318.1 2283034 D 261292 CDS YP_004695319.1 339483533 10934238 complement(2283802..2284587) 1 NC_015731.1 PFAM: Carbonic anhydrase, alpha-class, catalytic domain; KEGG: nit:NAL212_1475 carbonate dehydratase; carbonic anhydrase 2284587 10934238 Nit79A3_2133 Nitrosomonas sp. Is79A3 carbonic anhydrase YP_004695319.1 2283802 R 261292 CDS YP_004695320.1 339483534 10934239 complement(2284619..2284840) 1 NC_015731.1 KEGG: nit:NAL212_1476 hypothetical protein; hypothetical protein 2284840 10934239 Nit79A3_2134 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695320.1 2284619 R 261292 CDS YP_004695321.1 339483535 10934241 complement(2285412..2289488) 1 NC_015731.1 KEGG: plt:Plut_1811 hypothetical protein; hypothetical protein 2289488 10934241 Nit79A3_2136 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695321.1 2285412 R 261292 CDS YP_004695322.1 339483536 10934242 2289961..2290548 1 NC_015731.1 KEGG: nit:NAL212_1915 hypothetical protein; hypothetical protein 2290548 10934242 Nit79A3_2137 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695322.1 2289961 D 261292 CDS YP_004695323.1 339483537 10934245 complement(2292295..2292849) 1 NC_015731.1 hypothetical protein 2292849 10934245 Nit79A3_2140 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695323.1 2292295 R 261292 CDS YP_004695324.1 339483538 10934246 complement(2292987..2293505) 1 NC_015731.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nit:NAL212_1936 GCN5-like N-acetyltransferase; GCN5-like N-acetyltransferase 2293505 10934246 Nit79A3_2141 Nitrosomonas sp. Is79A3 GCN5-like N-acetyltransferase YP_004695324.1 2292987 R 261292 CDS YP_004695325.1 339483539 10934247 complement(2293555..2293935) 1 NC_015731.1 PFAM: Invasion gene expression up-regulator, SirB; KEGG: nit:NAL212_1937 invasion gene expression up-regulator SirB; Invasion gene expression up-regulator SirB 2293935 10934247 Nit79A3_2142 Nitrosomonas sp. Is79A3 Invasion gene expression up-regulator SirB YP_004695325.1 2293555 R 261292 CDS YP_004695326.1 339483540 10934248 complement(2293938..2294423) 1 NC_015731.1 KEGG: nit:NAL212_1938 hypothetical protein; hypothetical protein 2294423 10934248 Nit79A3_2143 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695326.1 2293938 R 261292 CDS YP_004695327.1 339483541 10934249 complement(2294540..2294896) 1 NC_015731.1 KEGG: nit:NAL212_1939 hypothetical protein; hypothetical protein 2294896 10934249 Nit79A3_2144 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695327.1 2294540 R 261292 CDS YP_004695328.1 339483542 10934250 complement(2294982..2295827) 1 NC_015731.1 PFAM: Protein of unknown function DUF6, transmembrane; KEGG: nit:NAL212_1940 hypothetical protein; hypothetical protein 2295827 10934250 Nit79A3_2145 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695328.1 2294982 R 261292 CDS YP_004695329.1 339483543 10934251 complement(2295887..2296993) 1 NC_015731.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: nit:NAL212_1941 rieske (2Fe-2S) iron-sulfur domain; Rieske (2Fe-2S) iron-sulfur domain-containing protein 2296993 10934251 Nit79A3_2146 Nitrosomonas sp. Is79A3 Rieske (2Fe-2S) iron-sulfur domain-containing protein YP_004695329.1 2295887 R 261292 CDS YP_004695330.1 339483544 10934252 2297218..2298642 1 NC_015731.1 KEGG: nit:NAL212_1942 hypothetical protein; hypothetical protein 2298642 10934252 Nit79A3_2147 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695330.1 2297218 D 261292 CDS YP_004695331.1 339483545 10934253 2298878..2301064 1 NC_015731.1 TIGRFAM: Primosomal protein n; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: nit:NAL212_1943 primosomal protein N'; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; primosomal protein N' 2301064 10934253 Nit79A3_2148 Nitrosomonas sp. Is79A3 primosomal protein N' YP_004695331.1 2298878 D 261292 CDS YP_004695332.1 339483546 10934254 2301140..2301376 1 NC_015731.1 PFAM: Protein of unknown function DUF465; KEGG: nit:NAL212_1556 hypothetical protein; hypothetical protein 2301376 10934254 Nit79A3_2149 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695332.1 2301140 D 261292 CDS YP_004695333.1 339483547 10934255 complement(2301465..2301905) 1 NC_015731.1 KEGG: nit:NAL212_2507 hypothetical protein; HAMAP: Protein of unknown function DUF188; PFAM: Protein of unknown function DUF188; hypothetical protein 2301905 10934255 Nit79A3_2150 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695333.1 2301465 R 261292 CDS YP_004695334.1 339483548 10934256 complement(2301936..2302520) 1 NC_015731.1 KEGG: nit:NAL212_2508 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 2302520 10934256 Nit79A3_2151 Nitrosomonas sp. Is79A3 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase YP_004695334.1 2301936 R 261292 CDS YP_004695335.1 339483549 10934257 complement(2302585..2304402) 1 NC_015731.1 SMART: Excinuclease ABC, C subunit, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; TIGRFAM: Excinuclease ABC, C subunit; KEGG: nit:NAL212_2509 UvrABC system protein C; HAMAP: UvrABC system protein C; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; Helix-hairpin-helix motif; UvrABC system protein C 2304402 10934257 Nit79A3_2152 Nitrosomonas sp. Is79A3 UvrABC system protein C YP_004695335.1 2302585 R 261292 CDS YP_004695336.1 339483550 10934258 complement(2304408..2304596) 1 NC_015731.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: nit:NAL212_2510 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 2304596 10934258 Nit79A3_2153 Nitrosomonas sp. Is79A3 4-oxalocrotonate tautomerase YP_004695336.1 2304408 R 261292 CDS YP_004695337.1 339483551 10934259 complement(2304630..2305304) 1 NC_015731.1 PFAM: Uracil-DNA glycosylase-like; KEGG: nit:NAL212_2511 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase 2305304 10934259 Nit79A3_2154 Nitrosomonas sp. Is79A3 uracil-DNA glycosylase YP_004695337.1 2304630 R 261292 CDS YP_004695338.1 339483552 10934260 2305464..2307251 1 NC_015731.1 PFAM: Bacterial surface antigen (D15); Surface antigen variable number; KEGG: nit:NAL212_1792 surface antigen (D15); surface antigen (D15) 2307251 10934260 Nit79A3_2155 Nitrosomonas sp. Is79A3 surface antigen (D15) YP_004695338.1 2305464 D 261292 CDS YP_004695339.1 339483553 10934261 2307261..2311097 1 NC_015731.1 PFAM: Protein of unknown function DUF490; KEGG: nit:NAL212_1791 hypothetical protein; hypothetical protein 2311097 10934261 Nit79A3_2156 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695339.1 2307261 D 261292 CDS YP_004695340.1 339483554 10934262 2311275..2311556 1 NC_015731.1 PFAM: Plasmid maintenance system killer; KEGG: gur:Gura_0413 plasmid maintenance system killer; plasmid maintenance system killer 2311556 10934262 Nit79A3_2157 Nitrosomonas sp. Is79A3 plasmid maintenance system killer YP_004695340.1 2311275 D 261292 CDS YP_004695341.1 339483555 10934263 2311568..2311864 1 NC_015731.1 TIGRFAM: Addiction module antidote protein, HigA; PFAM: Helix-turn-helix type 3; KEGG: geb:GM18_1267 XRE family plasmid maintenance system antidote protein; SMART: Helix-turn-helix type 3; XRE family transcriptional regulator 2311864 10934263 Nit79A3_2158 Nitrosomonas sp. Is79A3 XRE family transcriptional regulator YP_004695341.1 2311568 D 261292 CDS YP_004695342.1 339483556 10934264 2312261..2312674 1 NC_015731.1 KEGG: nit:NAL212_1951 hypothetical protein; hypothetical protein 2312674 10934264 Nit79A3_2159 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695342.1 2312261 D 261292 CDS YP_004695343.1 339483557 10934265 2312743..2315580 1 NC_015731.1 KEGG: nit:NAL212_1951 hypothetical protein; hypothetical protein 2315580 10934265 Nit79A3_2160 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695343.1 2312743 D 261292 CDS YP_004695344.1 339483558 10934266 complement(2315635..2317032) 1 NC_015731.1 TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; HAMAP: GTP-binding, EngA; KEGG: nit:NAL212_1231 ribosome-associated GTPase EngA; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein engA 2317032 10934266 Nit79A3_2161 Nitrosomonas sp. Is79A3 GTP-binding protein engA YP_004695344.1 2315635 R 261292 CDS YP_004695345.1 339483559 10934267 complement(2317291..2318430) 1 NC_015731.1 TIGRFAM: Outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat; KEGG: nit:NAL212_1230 outer membrane assembly lipoprotein YfgL; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; outer membrane assembly lipoprotein YfgL 2318430 10934267 Nit79A3_2162 Nitrosomonas sp. Is79A3 outer membrane assembly lipoprotein YfgL YP_004695345.1 2317291 R 261292 CDS YP_004695346.1 339483560 10934268 complement(2318531..2319169) 1 NC_015731.1 PFAM: Protein of unknown function DUF2133; KEGG: nit:NAL212_1229 hypothetical protein; hypothetical protein 2319169 10934268 Nit79A3_2163 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695346.1 2318531 R 261292 CDS YP_004695347.1 339483561 10934269 complement(2319258..2320526) 1 NC_015731.1 TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: nit:NAL212_1228 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; Histidyl-tRNA synthetase 2320526 10934269 Nit79A3_2164 Nitrosomonas sp. Is79A3 Histidyl-tRNA synthetase YP_004695347.1 2319258 R 261292 CDS YP_004695348.1 339483562 10934270 complement(2320526..2321764) 1 NC_015731.1 TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; KEGG: nit:NAL212_1227 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2321764 10934270 Nit79A3_2165 Nitrosomonas sp. Is79A3 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_004695348.1 2320526 R 261292 CDS YP_004695349.1 339483563 10934271 complement(2321806..2323038) 1 NC_015731.1 SMART: Helix-turn-helix type 3; KEGG: nit:NAL212_1226 transcriptional regulator, XRE family; XRE family transcriptional regulator 2323038 10934271 Nit79A3_2166 Nitrosomonas sp. Is79A3 XRE family transcriptional regulator YP_004695349.1 2321806 R 261292 CDS YP_004695350.1 339483564 10934272 complement(2323038..2323823) 1 NC_015731.1 KEGG: nit:NAL212_1225 type IV pilus biogenesis/stability protein PilW; TIGRFAM: Pilus biogenesis/stability type IV, PilW; PFAM: Tetratricopeptide TPR-1; type IV pilus biogenesis/stability protein PilW 2323823 10934272 Nit79A3_2167 Nitrosomonas sp. Is79A3 type IV pilus biogenesis/stability protein PilW YP_004695350.1 2323038 R 261292 CDS YP_004695351.1 339483565 10934273 complement(2323820..2324920) 1 NC_015731.1 TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; KEGG: nit:NAL212_1224 ribosomal RNA large subunit methyltransferase N; PFAM: Radical SAM; Ribosomal RNA large subunit methyltransferase N 2324920 10934273 Nit79A3_2168 Nitrosomonas sp. Is79A3 Ribosomal RNA large subunit methyltransferase N YP_004695351.1 2323820 R 261292 CDS YP_004695352.1 339483566 10934274 complement(2324941..2325366) 1 NC_015731.1 HAMAP: Nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase, core; KEGG: nit:NAL212_1223 nucleoside-diphosphate kinase; SMART: Nucleoside diphosphate kinase, core; Nucleoside diphosphate kinase 2325366 10934274 Nit79A3_2169 Nitrosomonas sp. Is79A3 Nucleoside diphosphate kinase YP_004695352.1 2324941 R 261292 CDS YP_004695353.1 339483567 10934275 complement(2325519..2325974) 1 NC_015731.1 KEGG: tgr:Tgr7_0713 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; Rhodanese-like protein 2325974 10934275 Nit79A3_2170 Nitrosomonas sp. Is79A3 Rhodanese-like protein YP_004695353.1 2325519 R 261292 CDS YP_004695354.1 339483568 10934276 complement(2326019..2326852) 1 NC_015731.1 KEGG: nit:NAL212_1221 hypothetical protein; hypothetical protein 2326852 10934276 Nit79A3_2171 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695354.1 2326019 R 261292 CDS YP_004695355.1 339483569 10934277 complement(2326894..2327640) 1 NC_015731.1 PFAM: Protein of unknown function DUF540; KEGG: nit:NAL212_1220 hypothetical protein; hypothetical protein 2327640 10934277 Nit79A3_2172 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695355.1 2326894 R 261292 CDS YP_004695356.1 339483570 10934278 2327948..2328253 1 NC_015731.1 KEGG: nit:NAL212_1219 flagellar biosynthesis anti-sigma factor protein FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor protein FlgM; PFAM: Anti-sigma-28 factor, FlgM; flagellar biosynthesis anti-sigma factor protein FlgM 2328253 10934278 Nit79A3_2173 Nitrosomonas sp. Is79A3 flagellar biosynthesis anti-sigma factor protein FlgM YP_004695356.1 2327948 D 261292 CDS YP_004695357.1 339483571 10934279 2328253..2328708 1 NC_015731.1 PFAM: FlgN; KEGG: nit:NAL212_1218 FlgN family protein; FlgN family protein 2328708 10934279 Nit79A3_2174 Nitrosomonas sp. Is79A3 FlgN family protein YP_004695357.1 2328253 D 261292 CDS YP_004695358.1 339483572 10934280 complement(2328717..2329511) 1 NC_015731.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: nit:NAL212_1217 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 2329511 10934280 Nit79A3_2175 Nitrosomonas sp. Is79A3 OmpA/MotB domain-containing protein YP_004695358.1 2328717 R 261292 CDS YP_004695359.1 339483573 10934281 complement(2329558..2330316) 1 NC_015731.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: nit:NAL212_1216 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 2330316 10934281 Nit79A3_2176 Nitrosomonas sp. Is79A3 MotA/TolQ/ExbB proton channel YP_004695359.1 2329558 R 261292 CDS YP_004695360.1 339483574 10934282 complement(2330359..2331075) 1 NC_015731.1 KEGG: nit:NAL212_1215 RNA polymerase, sigma 28 subunit, FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase, sigma 28 subunit, FliA/WhiG 2331075 10934282 Nit79A3_2177 Nitrosomonas sp. Is79A3 RNA polymerase, sigma 28 subunit, FliA/WhiG YP_004695360.1 2330359 R 261292 CDS YP_004695361.1 339483575 10934283 complement(2331082..2331978) 1 NC_015731.1 KEGG: nit:NAL212_1214 cobyrinic acid ac-diamide synthase; cobyrinic acid ac-diamide synthase 2331978 10934283 Nit79A3_2178 Nitrosomonas sp. Is79A3 cobyrinic acid ac-diamide synthase YP_004695361.1 2331082 R 261292 CDS YP_004695362.1 339483576 10934284 complement(2331971..2333260) 1 NC_015731.1 TIGRFAM: Signal-recognition particle (SRP)-type GTPase; PFAM: Signal recognition particle, SRP54 subunit, GTPase; KEGG: nit:NAL212_1213 flagellar biosynthetic protein FlhF; SMART: ATPase, AAA+ type, core; flagellar biosynthetic protein FlhF 2333260 10934284 Nit79A3_2179 Nitrosomonas sp. Is79A3 flagellar biosynthetic protein FlhF YP_004695362.1 2331971 R 261292 CDS YP_004695363.1 339483577 10934285 complement(2333257..2335341) 1 NC_015731.1 KEGG: nit:NAL212_1212 flagellar biosynthesis protein FlhA; TIGRFAM: Flagellar biosynthesis protein FlhA; PFAM: Type III secretion system FHIPEP; flagellar biosynthesis protein FlhA 2335341 10934285 Nit79A3_2180 Nitrosomonas sp. Is79A3 flagellar biosynthesis protein FlhA YP_004695363.1 2333257 R 261292 CDS YP_004695364.1 339483578 10934286 complement(2335402..2336544) 1 NC_015731.1 KEGG: nit:NAL212_1211 flagellar biosynthetic protein FlhB; TIGRFAM: Flagellar biosynthetic protein FlhB; PFAM: Type III secretion exporter; flagellar biosynthetic protein FlhB 2336544 10934286 Nit79A3_2181 Nitrosomonas sp. Is79A3 flagellar biosynthetic protein FlhB YP_004695364.1 2335402 R 261292 CDS YP_004695365.1 339483579 10934287 2336767..2339154 1 NC_015731.1 PFAM: Peptidase S45, penicillin amidase; KEGG: nit:NAL212_1210 acyl-homoserine-lactone acylase; peptidase S45 penicillin amidase 2339154 10934287 Nit79A3_2182 Nitrosomonas sp. Is79A3 peptidase S45 penicillin amidase YP_004695365.1 2336767 D 261292 CDS YP_004695366.1 339483580 10934288 2339443..2340750 1 NC_015731.1 KEGG: nit:NAL212_1380 hypothetical protein; hypothetical protein 2340750 10934288 Nit79A3_2183 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695366.1 2339443 D 261292 CDS YP_004695367.1 339483581 10934289 2340747..2342192 1 NC_015731.1 KEGG: nit:NAL212_1381 undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; UDP-phosphate glucose phosphotransferase 2342192 10934289 Nit79A3_2184 Nitrosomonas sp. Is79A3 UDP-phosphate glucose phosphotransferase YP_004695367.1 2340747 D 261292 CDS YP_004695368.1 339483582 10934290 complement(2342392..2342784) 1 NC_015731.1 KEGG: nit:NAL212_1056 hypothetical protein; hypothetical protein 2342784 10934290 Nit79A3_2185 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695368.1 2342392 R 261292 CDS YP_004695369.1 339483583 10934291 2343177..2343785 1 NC_015731.1 PFAM: LemA; KEGG: nit:NAL212_2014 LemA family protein; LemA family protein 2343785 10934291 Nit79A3_2186 Nitrosomonas sp. Is79A3 LemA family protein YP_004695369.1 2343177 D 261292 CDS YP_004695370.1 339483584 10934292 2343848..2344744 1 NC_015731.1 PFAM: Protein of unknown function DUF477; KEGG: nit:NAL212_2015 hypothetical protein; hypothetical protein 2344744 10934292 Nit79A3_2187 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695370.1 2343848 D 261292 CDS YP_004695371.1 339483585 10934293 2344745..2345248 1 NC_015731.1 PFAM: Protein of unknown function DUF477; KEGG: nit:NAL212_2016 hypothetical protein; hypothetical protein 2345248 10934293 Nit79A3_2188 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695371.1 2344745 D 261292 CDS YP_004695372.1 339483586 10934294 2345302..2345745 1 NC_015731.1 TIGRFAM: Peptidase A31, hydrogen uptake protein; KEGG: nmu:Nmul_A1675 HoxW protein; hydrogenase maturation protease 2345745 10934294 Nit79A3_2189 Nitrosomonas sp. Is79A3 hydrogenase maturation protease YP_004695372.1 2345302 D 261292 CDS YP_004695373.1 339483587 10934295 2345742..2346356 1 NC_015731.1 KEGG: gca:Galf_1580 HupE/UreJ protein; HupE/UreJ protein 2346356 10934295 Nit79A3_2190 Nitrosomonas sp. Is79A3 HupE/UreJ protein YP_004695373.1 2345742 D 261292 CDS YP_004695374.1 339483588 10934296 2346375..2346716 1 NC_015731.1 TIGRFAM: Hydrogenase nickel incorporation protein HypA/HybF; HAMAP: Hydrogenase nickel incorporation protein HypA/HybF; KEGG: slt:Slit_2425 hydrogenase nickel insertion protein HypA; PFAM: Hydrogenase nickel incorporation protein HypA/HybF; hydrogenase nickel incorporation protein hypA 2346716 10934296 Nit79A3_2191 Nitrosomonas sp. Is79A3 hydrogenase nickel incorporation protein hypA YP_004695374.1 2346375 D 261292 CDS YP_004695375.1 339483589 10934297 2346727..2347641 1 NC_015731.1 KEGG: slt:Slit_2424 hydrogenase accessory protein HypB; TIGRFAM: Hydrogenase accessory protein HypB; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; hydrogenase accessory protein HypB 2347641 10934297 Nit79A3_2192 Nitrosomonas sp. Is79A3 hydrogenase accessory protein HypB YP_004695375.1 2346727 D 261292 CDS YP_004695376.1 339483590 10934299 2348790..2349644 1 NC_015731.1 PFAM: Heat shock protein Hsp33 protein; KEGG: nit:NAL212_1286 HSP33 protein; heat shock protein 33 2349644 10934299 Nit79A3_2194 Nitrosomonas sp. Is79A3 heat shock protein 33 YP_004695376.1 2348790 D 261292 CDS YP_004695377.1 339483591 10934300 2349829..2353110 1 NC_015731.1 KEGG: nhl:Nhal_1559 hypothetical protein; hypothetical protein 2353110 10934300 Nit79A3_2195 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695377.1 2349829 D 261292 CDS YP_004695378.1 339483592 10934301 2353358..2353747 1 NC_015731.1 KEGG: nit:NAL212_1285 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 2353747 10934301 Nit79A3_2196 Nitrosomonas sp. Is79A3 response regulator receiver protein YP_004695378.1 2353358 D 261292 CDS YP_004695379.1 339483593 10934302 2353769..2355196 1 NC_015731.1 KEGG: nit:NAL212_1284 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; integral membrane sensor signal transduction histidine kinase 2355196 10934302 Nit79A3_2197 Nitrosomonas sp. Is79A3 integral membrane sensor signal transduction histidine kinase YP_004695379.1 2353769 D 261292 CDS YP_004695380.1 339483594 10934303 complement(2355253..2357646) 1 NC_015731.1 KEGG: nit:NAL212_1283 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 2357646 10934303 Nit79A3_2198 Nitrosomonas sp. Is79A3 DNA internalization-related competence protein ComEC/Rec2 YP_004695380.1 2355253 R 261292 CDS YP_004695381.1 339483595 10934304 2357757..2360678 1 NC_015731.1 SMART: MCP methyltransferase, CheR-type; PAS; TIGRFAM: PAS; KEGG: naz:Aazo_2376 signal transduction histidine kinase with CheB and CheR activity; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; MCP methyltransferase, CheR-type; PAS fold; chemotaxis protein CheR 2360678 10934304 Nit79A3_2199 Nitrosomonas sp. Is79A3 chemotaxis protein CheR YP_004695381.1 2357757 D 261292 CDS YP_004695382.1 339483596 10934305 2360682..2361890 1 NC_015731.1 KEGG: mfa:Mfla_0814 signal transduction histidine kinase, glucose-6-phosphate specific; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; PAS; PAS/PAC sensor signal transduction histidine kinase 2361890 10934305 Nit79A3_2200 Nitrosomonas sp. Is79A3 PAS/PAC sensor signal transduction histidine kinase YP_004695382.1 2360682 D 261292 CDS YP_004695383.1 339483597 10934306 2361859..2362500 1 NC_015731.1 KEGG: mmb:Mmol_1373 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 2362500 10934306 Nit79A3_2201 Nitrosomonas sp. Is79A3 LuxR family transcriptional regulator YP_004695383.1 2361859 D 261292 CDS YP_004695384.1 339483598 10934307 2362784..2363833 1 NC_015731.1 PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: nit:NAL212_1723 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 2363833 10934307 Nit79A3_2202 Nitrosomonas sp. Is79A3 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_004695384.1 2362784 D 261292 CDS YP_004695385.1 339483599 10934308 complement(2363919..2364593) 1 NC_015731.1 KEGG: nit:NAL212_1724 Sel1 domain-containing protein repeat-containing protein; PFAM: Sel1-like; SMART: Sel1-like; Sel1 domain-containing protein 2364593 10934308 Nit79A3_2203 Nitrosomonas sp. Is79A3 Sel1 domain-containing protein YP_004695385.1 2363919 R 261292 CDS YP_004695386.1 339483600 10934309 complement(2364678..2365427) 1 NC_015731.1 PFAM: Ankyrin repeat; KEGG: nit:NAL212_1725 ankyrin; Ankyrin 2365427 10934309 Nit79A3_2204 Nitrosomonas sp. Is79A3 Ankyrin YP_004695386.1 2364678 R 261292 CDS YP_004695387.1 339483601 10934310 2365766..2366938 1 NC_015731.1 KEGG: nit:NAL212_1726 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: FAD dependent oxidoreductase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 2366938 10934310 Nit79A3_2205 Nitrosomonas sp. Is79A3 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_004695387.1 2365766 D 261292 CDS YP_004695388.1 339483602 10934311 2367114..2368121 1 NC_015731.1 KEGG: nit:NAL212_1727 TIM-barrel protein, nifR3 family; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; PFAM: tRNA-dihydrouridine synthase; nitrogen regulator protein NIfR3 2368121 10934311 Nit79A3_2206 Nitrosomonas sp. Is79A3 nitrogen regulator protein NIfR3 YP_004695388.1 2367114 D 261292 CDS YP_004695389.1 339483603 10934312 2368125..2368367 1 NC_015731.1 PFAM: Helix-turn-helix, Fis-type; KEGG: nit:NAL212_1728 transcriptional regulator, Fis family; Fis family transcriptional regulator 2368367 10934312 Nit79A3_2207 Nitrosomonas sp. Is79A3 Fis family transcriptional regulator YP_004695389.1 2368125 D 261292 CDS YP_004695390.1 339483604 10934313 2368364..2369923 1 NC_015731.1 SMART: AICARFT/IMPCHase bienzyme, formylation region; TIGRFAM: AICARFT/IMPCHase bienzyme; KEGG: nit:NAL212_1729 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; HAMAP: Bifunctional purine biosynthesis protein purH; PFAM: AICARFT/IMPCHase bienzyme, formylation region; MGS-like; Bifunctional purine biosynthesis protein purH 2369923 10934313 Nit79A3_2208 Nitrosomonas sp. Is79A3 Bifunctional purine biosynthesis protein purH YP_004695390.1 2368364 D 261292 CDS YP_004695391.1 339483605 10934314 2369940..2371247 1 NC_015731.1 TIGRFAM: Phosphoribosylglycinamide synthetase; HAMAP: Phosphoribosylglycinamide synthetase; KEGG: nit:NAL212_1730 phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; Phosphoribosylamine--glycine ligase 2371247 10934314 Nit79A3_2209 Nitrosomonas sp. Is79A3 Phosphoribosylamine--glycine ligase YP_004695391.1 2369940 D 261292 CDS YP_004695392.1 339483606 10934315 complement(2371271..2372479) 1 NC_015731.1 KEGG: gca:Galf_1053 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; flagellar hook-associated protein 3 2372479 10934315 Nit79A3_2210 Nitrosomonas sp. Is79A3 flagellar hook-associated protein 3 YP_004695392.1 2371271 R 261292 CDS YP_004695393.1 339483607 10934316 complement(2372503..2374419) 1 NC_015731.1 KEGG: nit:NAL212_1733 flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; flagellar hook-associated protein FlgK 2374419 10934316 Nit79A3_2211 Nitrosomonas sp. Is79A3 flagellar hook-associated protein FlgK YP_004695393.1 2372503 R 261292 CDS YP_004695394.1 339483608 10934317 complement(2374502..2375509) 1 NC_015731.1 TIGRFAM: Flagellar protein FlgJ type-2; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ, N-terminal; KEGG: nit:NAL212_1734 flagellar rod assembly protein/muramidase FlgJ; SMART: Lysozyme subfamily 2; flagellar rod assembly protein/muramidase FlgJ 2375509 10934317 Nit79A3_2212 Nitrosomonas sp. Is79A3 flagellar rod assembly protein/muramidase FlgJ YP_004695394.1 2374502 R 261292 CDS YP_004695395.1 339483609 10934318 complement(2375528..2376637) 1 NC_015731.1 KEGG: nit:NAL212_1735 flagellar P-ring protein; HAMAP: Flagellar P-ring protein; PFAM: Flagellar P-ring protein; Flagellar P-ring protein 2376637 10934318 Nit79A3_2213 Nitrosomonas sp. Is79A3 Flagellar P-ring protein YP_004695395.1 2375528 R 261292 CDS YP_004695396.1 339483610 10934319 complement(2376688..2377404) 1 NC_015731.1 KEGG: nit:NAL212_1736 flagellar L-ring protein; HAMAP: Flagellar L-ring protein; PFAM: Flagellar L-ring protein; Flagellar L-ring protein 2377404 10934319 Nit79A3_2214 Nitrosomonas sp. Is79A3 Flagellar L-ring protein YP_004695396.1 2376688 R 261292 CDS YP_004695397.1 339483611 10934320 complement(2377431..2378213) 1 NC_015731.1 KEGG: nit:NAL212_1737 flagellar basal-body rod protein FlgG; TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; flagellar basal-body rod protein FlgG 2378213 10934320 Nit79A3_2215 Nitrosomonas sp. Is79A3 flagellar basal-body rod protein FlgG YP_004695397.1 2377431 R 261292 CDS YP_004695398.1 339483612 10934321 complement(2378244..2378987) 1 NC_015731.1 KEGG: nit:NAL212_1738 flagellar basal-body rod protein FlgF; TIGRFAM: Flagellar basal-body rod FlgF; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body rod protein, N-terminal; Ribosomal protein L6, alpha-beta domain; flagellar basal body rod protein FlgF 2378987 10934321 Nit79A3_2216 Nitrosomonas sp. Is79A3 flagellar basal body rod protein FlgF YP_004695398.1 2378244 R 261292 CDS YP_004695399.1 339483613 10934322 complement(2379016..2380284) 1 NC_015731.1 KEGG: nit:NAL212_1739 fagellar hook-basal body protein; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body FlaE; Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal; flagellar hook-basal body protein 2380284 10934322 Nit79A3_2217 Nitrosomonas sp. Is79A3 flagellar hook-basal body protein YP_004695399.1 2379016 R 261292 CDS YP_004695400.1 339483614 10934323 complement(2380298..2380963) 1 NC_015731.1 PFAM: Flagellar hook capping protein; KEGG: nit:NAL212_1740 flagellar hook capping protein; flagellar hook capping protein 2380963 10934323 Nit79A3_2218 Nitrosomonas sp. Is79A3 flagellar hook capping protein YP_004695400.1 2380298 R 261292 CDS YP_004695401.1 339483615 10934324 complement(2380975..2381379) 1 NC_015731.1 KEGG: nit:NAL212_1741 flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; flagellar basal body rod protein FlgC 2381379 10934324 Nit79A3_2219 Nitrosomonas sp. Is79A3 flagellar basal body rod protein FlgC YP_004695401.1 2380975 R 261292 CDS YP_004695402.1 339483616 10934325 complement(2381382..2381792) 1 NC_015731.1 KEGG: nit:NAL212_1743 flagellar basal-body rod protein FlgB; TIGRFAM: Flagellar basal-body rod protein FlgB; PFAM: Flagellar basal body rod protein, N-terminal; flagellar basal-body rod protein FlgB 2381792 10934325 Nit79A3_2220 Nitrosomonas sp. Is79A3 flagellar basal-body rod protein FlgB YP_004695402.1 2381382 R 261292 CDS YP_004695403.1 339483617 10934326 2382020..2382721 1 NC_015731.1 KEGG: nit:NAL212_1744 flagella basal body P-ring formation protein FlgA; TIGRFAM: Flagella basal body P-ring formation protein FlgA; PFAM: SAF domain; flagellar basal body P-ring biosynthesis protein FlgA 2382721 10934326 Nit79A3_2221 Nitrosomonas sp. Is79A3 flagellar basal body P-ring biosynthesis protein FlgA YP_004695403.1 2382020 D 261292 CDS YP_004695404.1 339483618 10934327 2382864..2383157 1 NC_015731.1 KEGG: nit:NAL212_1745 hypothetical protein; hypothetical protein 2383157 10934327 Nit79A3_2222 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695404.1 2382864 D 261292 CDS YP_004695405.1 339483619 10934328 2383265..2383633 1 NC_015731.1 PFAM: Protein of unknown function DUF498; KEGG: nit:NAL212_1746 hypothetical protein; hypothetical protein 2383633 10934328 Nit79A3_2223 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695405.1 2383265 D 261292 CDS YP_004695406.1 339483620 10934329 2383844..2384071 1 NC_015731.1 KEGG: nit:NAL212_2372 hypothetical protein; hypothetical protein 2384071 10934329 Nit79A3_2224 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695406.1 2383844 D 261292 CDS YP_004695407.1 339483621 10934330 2384784..2385611 1 NC_015731.1 PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; KEGG: nit:NAL212_2373 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 2385611 10934330 Nit79A3_2225 Nitrosomonas sp. Is79A3 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_004695407.1 2384784 D 261292 CDS YP_004695408.1 339483622 10934331 complement(2385624..2387129) 1 NC_015731.1 PFAM: Peptidase M32, carboxypeptidase Taq metallopeptidase; KEGG: nit:NAL212_2374 carboxypeptidase Taq; peptidase M32 carboxypeptidase Taq metallopeptidase 2387129 10934331 Nit79A3_2226 Nitrosomonas sp. Is79A3 peptidase M32 carboxypeptidase Taq metallopeptidase YP_004695408.1 2385624 R 261292 CDS YP_004695409.1 339483623 10934332 2387250..2387687 1 NC_015731.1 KEGG: nit:NAL212_2375 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00701; PFAM: Uncharacterised protein family UPF0093; hypothetical protein 2387687 10934332 Nit79A3_2227 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695409.1 2387250 D 261292 CDS YP_004695410.1 339483624 10934333 complement(2387757..2388041) 1 NC_015731.1 KEGG: nit:NAL212_2376 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 2388041 10934333 Nit79A3_2228 Nitrosomonas sp. Is79A3 helix-turn-helix domain-containing protein YP_004695410.1 2387757 R 261292 CDS YP_004695411.1 339483625 10934334 complement(2388038..2388391) 1 NC_015731.1 PFAM: Protein of unknown function DUF891; KEGG: pph:Ppha_2124 protein of unknown function DUF891; hypothetical protein 2388391 10934334 Nit79A3_2229 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695411.1 2388038 R 261292 CDS YP_004695412.1 339483626 10934335 complement(2388493..2389080) 1 NC_015731.1 hypothetical protein 2389080 10934335 Nit79A3_2230 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695412.1 2388493 R 261292 CDS YP_004695413.1 339483627 10934336 complement(2389132..2389665) 1 NC_015731.1 TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: nit:NAL212_2409 peptide deformylase; PFAM: Formylmethionine deformylase; peptide deformylase 2389665 10934336 Nit79A3_2231 Nitrosomonas sp. Is79A3 peptide deformylase YP_004695413.1 2389132 R 261292 CDS YP_004695414.1 339483628 10934337 complement(2389655..2390401) 1 NC_015731.1 PFAM: Nucleoside phosphorylase; KEGG: nit:NAL212_2410 S-methyl-5'-thioadenosine phosphorylase; purine or other phosphorylase 1 2390401 10934337 Nit79A3_2232 Nitrosomonas sp. Is79A3 purine or other phosphorylase 1 YP_004695414.1 2389655 R 261292 CDS YP_004695415.1 339483629 10934338 complement(2390414..2390959) 1 NC_015731.1 PFAM: Phosphoribosyltransferase; KEGG: nit:NAL212_2411 phosphoribosyltransferase; phosphoribosyltransferase 2390959 10934338 Nit79A3_2233 Nitrosomonas sp. Is79A3 phosphoribosyltransferase YP_004695415.1 2390414 R 261292 CDS YP_004695416.1 339483630 10934339 complement(2390974..2393073) 1 NC_015731.1 SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT; TIGRFAM: NAD-dependent DNA ligase; KEGG: nit:NAL212_2412 DNA ligase, NAD-dependent; HAMAP: DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; Helix-hairpin-helix motif; BRCT; DNA ligase 2393073 10934339 Nit79A3_2234 Nitrosomonas sp. Is79A3 DNA ligase YP_004695416.1 2390974 R 261292 CDS YP_004695417.1 339483631 10934340 2393124..2393951 1 NC_015731.1 KEGG: nit:NAL212_2413 hypothetical protein; hypothetical protein 2393951 10934340 Nit79A3_2235 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695417.1 2393124 D 261292 CDS YP_004695418.1 339483632 10934341 2393992..2394537 1 NC_015731.1 PFAM: NUDIX hydrolase domain; KEGG: nit:NAL212_2414 NUDIX hydrolase; NUDIX hydrolase 2394537 10934341 Nit79A3_2236 Nitrosomonas sp. Is79A3 NUDIX hydrolase YP_004695418.1 2393992 D 261292 CDS YP_004695419.1 339483633 10934342 2394587..2395744 1 NC_015731.1 PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal; KEGG: nit:NAL212_2325 beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 2395744 10934342 Nit79A3_2237 Nitrosomonas sp. Is79A3 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_004695419.1 2394587 D 261292 CDS YP_004695420.1 339483634 10934343 2395775..2396647 1 NC_015731.1 PFAM: Aminotransferase, class IV; KEGG: nit:NAL212_2326 D-amino-acid transaminase; class IV aminotransferase 2396647 10934343 Nit79A3_2238 Nitrosomonas sp. Is79A3 class IV aminotransferase YP_004695420.1 2395775 D 261292 CDS YP_004695421.1 339483635 10934344 2396689..2396955 1 NC_015731.1 KEGG: nit:NAL212_2327 hypothetical protein; HAMAP: Protein of unknown function DUF493; PFAM: Protein of unknown function DUF493; hypothetical protein 2396955 10934344 Nit79A3_2239 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695421.1 2396689 D 261292 CDS YP_004695422.1 339483636 10934345 2396952..2397632 1 NC_015731.1 TIGRFAM: Octanoyltransferase; HAMAP: Octanoyltransferase; KEGG: nit:NAL212_2328 lipoate-protein ligase B; PFAM: Biotin/lipoate A/B protein ligase; Octanoyltransferase 2397632 10934345 Nit79A3_2240 Nitrosomonas sp. Is79A3 Octanoyltransferase YP_004695422.1 2396952 D 261292 CDS YP_004695423.1 339483637 10934346 2397622..2398566 1 NC_015731.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Lipoate synthase; KEGG: nit:NAL212_2329 lipoic acid synthetase; HAMAP: Lipoate synthase; PFAM: Radical SAM; Lipoyl synthase 2398566 10934346 Nit79A3_2241 Nitrosomonas sp. Is79A3 Lipoyl synthase YP_004695423.1 2397622 D 261292 CDS YP_004695424.1 339483638 10934347 2398862..2399233 1 NC_015731.1 hypothetical protein 2399233 10934347 Nit79A3_2242 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695424.1 2398862 D 261292 CDS YP_004695425.1 339483639 10934348 complement(2399452..2399868) 1 NC_015731.1 PFAM: Peroxiredoxin, OsmC-like protein; KEGG: nit:NAL212_2330 OsmC family protein; OsmC family protein 2399868 10934348 Nit79A3_2243 Nitrosomonas sp. Is79A3 OsmC family protein YP_004695425.1 2399452 R 261292 CDS YP_004695426.1 339483640 10934349 complement(2399972..2400283) 1 NC_015731.1 PFAM: Cytochrome c, class I; KEGG: nit:NAL212_2331 cytochrome c class I; cytochrome c class I 2400283 10934349 Nit79A3_2244 Nitrosomonas sp. Is79A3 cytochrome c class I YP_004695426.1 2399972 R 261292 CDS YP_004695427.1 339483641 10934350 complement(2400526..2402199) 1 NC_015731.1 TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: nit:NAL212_2332 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; Dihydroxy-acid dehydratase 2402199 10934350 Nit79A3_2245 Nitrosomonas sp. Is79A3 Dihydroxy-acid dehydratase YP_004695427.1 2400526 R 261292 CDS YP_004695428.1 339483642 10934351 2402306..2403127 1 NC_015731.1 TIGRFAM: Prolipoprotein diacylglyceryl transferase; HAMAP: Prolipoprotein diacylglyceryl transferase; KEGG: nit:NAL212_2333 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 2403127 10934351 Nit79A3_2246 Nitrosomonas sp. Is79A3 prolipoprotein diacylglyceryl transferase YP_004695428.1 2402306 D 261292 CDS YP_004695429.1 339483643 10934352 complement(2403207..2403356) 1 NC_015731.1 hypothetical protein 2403356 10934352 Nit79A3_2247 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695429.1 2403207 R 261292 CDS YP_004695430.1 339483644 10934353 2403576..2403959 1 NC_015731.1 KEGG: nit:NAL212_0469 hypothetical protein; hypothetical protein 2403959 10934353 Nit79A3_2248 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695430.1 2403576 D 261292 CDS YP_004695431.1 339483645 10934354 complement(2404036..2405652) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: nit:NAL212_3145 IS5 family transposase; transposase IS4 family protein 2405652 10934354 Nit79A3_2249 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695431.1 2404036 R 261292 CDS YP_004695432.1 339483646 10934355 complement(2406024..2407331) 1 NC_015731.1 TIGRFAM: Signal transduction histidine kinase, phosphate regulon sensor PhoR; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; KEGG: nit:NAL212_2335 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAS/PAC sensor signal transduction histidine kinase 2407331 10934355 Nit79A3_2250 Nitrosomonas sp. Is79A3 PAS/PAC sensor signal transduction histidine kinase YP_004695432.1 2406024 R 261292 CDS YP_004695433.1 339483647 10934356 complement(2407481..2408203) 1 NC_015731.1 TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein phoB; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; KEGG: nit:NAL212_2336 two component transcriptional regulator PhoB, winged helix family; SMART: Signal transduction response regulator, receiver region; two component transcriptional regulator PhoB, winged helix family 2408203 10934356 Nit79A3_2251 Nitrosomonas sp. Is79A3 two component transcriptional regulator PhoB, winged helix family YP_004695433.1 2407481 R 261292 CDS YP_004695434.1 339483648 10934357 2408298..2408708 1 NC_015731.1 PFAM: Protein of unknown function DUF971; KEGG: nit:NAL212_2337 hypothetical protein; hypothetical protein 2408708 10934357 Nit79A3_2252 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695434.1 2408298 D 261292 CDS YP_004695435.1 339483649 10934358 2408801..2409535 1 NC_015731.1 TIGRFAM: UbiE/COQ5 methyltransferase; HAMAP: UbiE/COQ5 methyltransferase; KEGG: nit:NAL212_2338 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Ubiquinone/menaquinone biosynthesis methyltransferase ubiE 2409535 10934358 Nit79A3_2253 Nitrosomonas sp. Is79A3 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE YP_004695435.1 2408801 D 261292 CDS YP_004695436.1 339483650 10934359 complement(2410061..2412484) 1 NC_015731.1 KEGG: pbr:PB2503_07504 hypothetical protein; hypothetical protein 2412484 10934359 Nit79A3_2254 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695436.1 2410061 R 261292 CDS YP_004695437.1 339483651 10934360 complement(2412484..2413929) 1 NC_015731.1 KEGG: app:CAP2UW1_1523 NodT family RND efflux system, outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; RND efflux system, outer membrane lipoprotein, NodT family 2413929 10934360 Nit79A3_2255 Nitrosomonas sp. Is79A3 RND efflux system, outer membrane lipoprotein, NodT family YP_004695437.1 2412484 R 261292 CDS YP_004695438.1 339483652 10934361 complement(2414108..2414218) 1 NC_015731.1 hypothetical protein 2414218 10934361 Nit79A3_2256 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695438.1 2414108 R 261292 CDS YP_004695439.1 339483653 10934362 complement(2414394..2415656) 1 NC_015731.1 KEGG: gvi:gll1319 hypothetical protein; hypothetical protein 2415656 10934362 Nit79A3_2257 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695439.1 2414394 R 261292 CDS YP_004695440.1 339483654 10934363 complement(2416038..2417117) 1 NC_015731.1 TIGRFAM: tRNA-specific 2-thiouridylase; HAMAP: tRNA-specific 2-thiouridylase; KEGG: nit:NAL212_2547 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like; tRNA-specific 2-thiouridylase mnmA 2417117 10934363 Nit79A3_2258 Nitrosomonas sp. Is79A3 tRNA-specific 2-thiouridylase mnmA YP_004695440.1 2416038 R 261292 CDS YP_004695441.1 339483655 10934364 complement(2417122..2417577) 1 NC_015731.1 PFAM: NUDIX hydrolase domain; KEGG: nit:NAL212_2548 NUDIX hydrolase; NUDIX hydrolase 2417577 10934364 Nit79A3_2259 Nitrosomonas sp. Is79A3 NUDIX hydrolase YP_004695441.1 2417122 R 261292 CDS YP_004695442.1 339483656 10934365 complement(2417715..2419517) 1 NC_015731.1 KEGG: mmw:Mmwyl1_1181 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor hybrid histidine kinase 2419517 10934365 Nit79A3_2260 Nitrosomonas sp. Is79A3 integral membrane sensor hybrid histidine kinase YP_004695442.1 2417715 R 261292 CDS YP_004695443.1 339483657 10934368 2421201..2421929 1 NC_015731.1 PFAM: Transposase, mutator type; KEGG: net:Neut_2405 transposase, mutator type; transposase mutator type 2421929 10934368 Nit79A3_2262 Nitrosomonas sp. Is79A3 transposase mutator type YP_004695443.1 2421201 D 261292 CDS YP_004695444.1 339483658 10934369 2421968..2422204 1 NC_015731.1 hypothetical protein 2422204 10934369 Nit79A3_2263 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695444.1 2421968 D 261292 CDS YP_004695445.1 339483659 10934370 complement(2422544..2424355) 1 NC_015731.1 KEGG: hch:HCH_04215 hypothetical protein; hypothetical protein 2424355 10934370 Nit79A3_2264 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695445.1 2422544 R 261292 CDS YP_004695446.1 339483660 10934371 complement(2424352..2425494) 1 NC_015731.1 KEGG: rde:RD1_0863 hypothetical protein; hypothetical protein 2425494 10934371 Nit79A3_2265 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695446.1 2424352 R 261292 CDS YP_004695447.1 339483661 10934372 complement(2425960..2427273) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: gur:Gura_1234 hypothetical protein; transposase IS4 family protein 2427273 10934372 Nit79A3_2266 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695447.1 2425960 R 261292 CDS YP_004695448.1 339483662 10934373 2427765..2428526 1 NC_015731.1 KEGG: aex:Astex_1811 hypothetical protein; hypothetical protein 2428526 10934373 Nit79A3_2267 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695448.1 2427765 D 261292 CDS YP_004695449.1 339483663 10934374 2428523..2429392 1 NC_015731.1 PFAM: Protein of unknown function DUF900, hydrolase-like; KEGG: aex:Astex_1810 hypothetical protein; hypothetical protein 2429392 10934374 Nit79A3_2268 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695449.1 2428523 D 261292 CDS YP_004695450.1 339483664 10934376 2429929..2430942 1 NC_015731.1 KEGG: rpe:RPE_4585 hypothetical protein; hypothetical protein 2430942 10934376 Nit79A3_2270 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695450.1 2429929 D 261292 CDS YP_004695451.1 339483665 10934377 2431139..2431426 1 NC_015731.1 KEGG: dac:Daci_3140 hypothetical protein; hypothetical protein 2431426 10934377 Nit79A3_2271 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695451.1 2431139 D 261292 CDS YP_004695452.1 339483666 10934378 2431426..2431833 1 NC_015731.1 KEGG: dac:Daci_3141 hypothetical protein; hypothetical protein 2431833 10934378 Nit79A3_2272 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695452.1 2431426 D 261292 CDS YP_004695453.1 339483667 10934379 complement(2431936..2433315) 1 NC_015731.1 PFAM: SEC-C motif; KEGG: app:CAP2UW1_3119 sec-C motif domain-containing protein; SEC-C motif domain-containing protein 2433315 10934379 Nit79A3_2273 Nitrosomonas sp. Is79A3 SEC-C motif domain-containing protein YP_004695453.1 2431936 R 261292 CDS YP_004695454.1 339483668 10934380 2433548..2434510 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 2434510 10934380 Nit79A3_2274 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695454.1 2433548 D 261292 CDS YP_004695455.1 339483669 10934382 complement(2436579..2437544) 1 NC_015731.1 KEGG: nit:NAL212_2546 magnesium and cobalt transport protein CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; magnesium and cobalt transport protein CorA 2437544 10934382 Nit79A3_2276 Nitrosomonas sp. Is79A3 magnesium and cobalt transport protein CorA YP_004695455.1 2436579 R 261292 CDS YP_004695456.1 339483670 10934383 2437775..2438098 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein 2438098 10934383 Nit79A3_2277 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004695456.1 2437775 D 261292 CDS YP_004695457.1 339483671 10934384 2438095..2439003 1 NC_015731.1 KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 2439003 10934384 Nit79A3_2278 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004695457.1 2438095 D 261292 CDS YP_004695458.1 339483672 10934385 2439071..2439169 1 NC_015731.1 hypothetical protein 2439169 10934385 Nit79A3_2279 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695458.1 2439071 D 261292 CDS YP_004695459.1 339483673 10934386 2439599..2440177 1 NC_015731.1 PFAM: Haemolysin-type calcium-binding region; KEGG: nit:NAL212_1895 5'-nucleotidase; Hemolysin-type calcium-binding protein 2440177 10934386 Nit79A3_2280 Nitrosomonas sp. Is79A3 Hemolysin-type calcium-binding protein YP_004695459.1 2439599 D 261292 CDS YP_004695460.1 339483674 10934387 2440407..2440733 1 NC_015731.1 KEGG: nit:NAL212_2023 hypothetical protein; hypothetical protein 2440733 10934387 Nit79A3_2281 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695460.1 2440407 D 261292 CDS YP_004695461.1 339483675 10934388 2440938..2442782 1 NC_015731.1 PFAM: Uncharacterised protein family UPF0118; KEGG: nit:NAL212_2698 hypothetical protein; hypothetical protein 2442782 10934388 Nit79A3_2282 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695461.1 2440938 D 261292 CDS YP_004695462.1 339483676 10934390 2444793..2445755 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 2445755 10934390 Nit79A3_2284 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695462.1 2444793 D 261292 CDS YP_004695463.1 339483677 10934392 complement(2446237..2448024) 1 NC_015731.1 KEGG: mgm:Mmc1_3076 hypothetical protein; hypothetical protein 2448024 10934392 Nit79A3_2286 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695463.1 2446237 R 261292 CDS YP_004695464.1 339483678 10934393 complement(2448149..2449711) 1 NC_015731.1 KEGG: hoh:Hoch_6445 thiol oxidoreductase-like protein; thiol oxidoreductase 2449711 10934393 Nit79A3_2287 Nitrosomonas sp. Is79A3 thiol oxidoreductase YP_004695464.1 2448149 R 261292 CDS YP_004695465.1 339483679 10934394 complement(2450373..2451116) 1 NC_015731.1 PFAM: Integral membrane protein TerC; KEGG: nit:NAL212_2785 integral membrane protein TerC; integral membrane protein TerC 2451116 10934394 Nit79A3_2288 Nitrosomonas sp. Is79A3 integral membrane protein TerC YP_004695465.1 2450373 R 261292 CDS YP_004695466.1 339483680 10934395 2451390..2451860 1 NC_015731.1 KEGG: nit:NAL212_2225 hypothetical protein; hypothetical protein 2451860 10934395 Nit79A3_2289 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695466.1 2451390 D 261292 CDS YP_004695467.1 339483681 10934396 complement(2451989..2452981) 1 NC_015731.1 KEGG: nit:NAL212_1763 ribonuclease BN; TIGRFAM: Ribonuclease BN; PFAM: Ribonuclease BN-related; ribonuclease BN 2452981 10934396 Nit79A3_2290 Nitrosomonas sp. Is79A3 ribonuclease BN YP_004695467.1 2451989 R 261292 CDS YP_004695468.1 339483682 10934397 2453234..2453617 1 NC_015731.1 KEGG: nit:NAL212_0931 hypothetical protein; hypothetical protein 2453617 10934397 Nit79A3_2291 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695468.1 2453234 D 261292 CDS YP_004695469.1 339483683 10934398 complement(2453795..2454265) 1 NC_015731.1 KEGG: nit:NAL212_1490 hypothetical protein; hypothetical protein 2454265 10934398 Nit79A3_2292 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695469.1 2453795 R 261292 CDS YP_004695470.1 339483684 10934399 complement(2454649..2455557) 1 NC_015731.1 KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 2455557 10934399 Nit79A3_2294 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004695470.1 2454649 R 261292 CDS YP_004695471.1 339483685 10934400 complement(2455554..2455877) 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein 2455877 10934400 Nit79A3_2295 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004695471.1 2455554 R 261292 CDS YP_004695472.1 339483686 10934401 complement(2457213..2458175) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 2458175 10934401 Nit79A3_2296 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695472.1 2457213 R 261292 CDS YP_004695473.1 339483687 10934403 complement(2458963..2460255) 1 NC_015731.1 PFAM: DNA-repair protein, UmuC-like; KEGG: nit:NAL212_2528 DNA-directed DNA polymerase; UMUC domain-containing protein DNA-repair protein 2460255 10934403 Nit79A3_2298 Nitrosomonas sp. Is79A3 UMUC domain-containing protein DNA-repair protein YP_004695473.1 2458963 R 261292 CDS YP_004695474.1 339483688 10934404 complement(2460248..2461639) 1 NC_015731.1 TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; KEGG: nit:NAL212_2527 DNA polymerase III, epsilon subunit; SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; DNA polymerase III subunit epsilon 2461639 10934404 Nit79A3_2299 Nitrosomonas sp. Is79A3 DNA polymerase III subunit epsilon YP_004695474.1 2460248 R 261292 CDS YP_004695475.1 339483689 10934405 complement(2461636..2462241) 1 NC_015731.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: nit:NAL212_2526 peptidase S24/S26A/S26B, conserved region; peptidase S24/S26A/S26B 2462241 10934405 Nit79A3_2300 Nitrosomonas sp. Is79A3 peptidase S24/S26A/S26B YP_004695475.1 2461636 R 261292 CDS YP_004695476.1 339483690 10934406 complement(2462293..2462520) 1 NC_015731.1 KEGG: msm:MSMEG_5583 HNH endonuclease; hypothetical protein 2462520 10934406 Nit79A3_2301 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695476.1 2462293 R 261292 CDS YP_004695477.1 339483691 10934410 complement(2463458..2464624) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: dar:Daro_2223 transposase IS4; transposase IS4 family protein 2464624 10934410 Nit79A3_2305 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695477.1 2463458 R 261292 CDS YP_004695478.1 339483692 10934411 complement(2464706..2464885) 1 NC_015731.1 hypothetical protein 2464885 10934411 Nit79A3_2306 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695478.1 2464706 R 261292 CDS YP_004695479.1 339483693 10934412 complement(2464912..2466858) 1 NC_015731.1 PFAM: AsmA; KEGG: nit:NAL212_2018 AsmA family protein; AsmA family protein 2466858 10934412 Nit79A3_2307 Nitrosomonas sp. Is79A3 AsmA family protein YP_004695479.1 2464912 R 261292 CDS YP_004695480.1 339483694 10934413 complement(2467004..2467210) 1 NC_015731.1 KEGG: nit:NAL212_0955 hypothetical protein; hypothetical protein 2467210 10934413 Nit79A3_2308 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695480.1 2467004 R 261292 CDS YP_004695481.1 339483695 10934414 complement(2467698..2468060) 1 NC_015731.1 KEGG: nit:NAL212_2551 hypothetical protein; hypothetical protein 2468060 10934414 Nit79A3_2309 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695481.1 2467698 R 261292 CDS YP_004695482.1 339483696 10934415 complement(2468057..2468335) 1 NC_015731.1 PFAM: CsbD-like; KEGG: dar:Daro_2060 CsbD-like; CsbD family protein 2468335 10934415 Nit79A3_2310 Nitrosomonas sp. Is79A3 CsbD family protein YP_004695482.1 2468057 R 261292 CDS YP_004695483.1 339483697 10934416 complement(2468392..2468634) 1 NC_015731.1 hypothetical protein 2468634 10934416 Nit79A3_2311 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695483.1 2468392 R 261292 CDS YP_004695484.1 339483698 10934417 complement(2468920..2469480) 1 NC_015731.1 PFAM: Haemerythrin/HHE cation-binding motif; KEGG: nit:NAL212_0423 hemerythrin HHE cation binding domain-containing protein; Hemerythrin HHE cation binding domain-containing protein 2469480 10934417 Nit79A3_2312 Nitrosomonas sp. Is79A3 Hemerythrin HHE cation binding domain-containing protein YP_004695484.1 2468920 R 261292 CDS YP_004695485.1 339483699 10934418 complement(2469672..2470547) 1 NC_015731.1 PFAM: Integrase, catalytic core; KEGG: rso:RSp0548 ISRSO8-transposase orfB protein; Integrase catalytic subunit 2470547 10934418 Nit79A3_2313 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004695485.1 2469672 R 261292 CDS YP_004695486.1 339483700 10934420 2471388..2472518 1 NC_015731.1 KEGG: hoh:Hoch_1738 hypothetical protein; hypothetical protein 2472518 10934420 Nit79A3_2315 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695486.1 2471388 D 261292 CDS YP_004695487.1 339483701 10934421 2472766..2472990 1 NC_015731.1 hypothetical protein 2472990 10934421 Nit79A3_2316 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695487.1 2472766 D 261292 CDS YP_004695488.1 339483702 10934422 complement(2473235..2473381) 1 NC_015731.1 KEGG: dar:Daro_2699 hypothetical protein; hypothetical protein 2473381 10934422 Nit79A3_2317 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695488.1 2473235 R 261292 CDS YP_004695489.1 339483703 10934423 2474490..2475761 1 NC_015731.1 PFAM: Integrase, catalytic core, phage; KEGG: lpf:lpl0065 hypothetical protein; integrase 2475761 10934423 Nit79A3_2318 Nitrosomonas sp. Is79A3 integrase YP_004695489.1 2474490 D 261292 CDS YP_004695490.1 339483704 10934424 2475786..2476052 1 NC_015731.1 PFAM: Plasmid stabilisation system; KEGG: nit:NAL212_0367 plasmid stabilization system; plasmid stabilization system 2476052 10934424 Nit79A3_2319 Nitrosomonas sp. Is79A3 plasmid stabilization system YP_004695490.1 2475786 D 261292 CDS YP_004695491.1 339483705 10934425 2476049..2476381 1 NC_015731.1 PFAM: Helix-turn-helix type 3; KEGG: nit:NAL212_0368 helix-turn-helix domain-containing protein; helix-turn-helix domain-containing protein 2476381 10934425 Nit79A3_2320 Nitrosomonas sp. Is79A3 helix-turn-helix domain-containing protein YP_004695491.1 2476049 D 261292 CDS YP_004695492.1 339483706 10934426 2476407..2477105 1 NC_015731.1 KEGG: YecA family protein; TIGRFAM: YgfB/YecA protein; PFAM: SEC-C motif; hypothetical protein 2477105 10934426 Nit79A3_2321 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695492.1 2476407 D 261292 CDS YP_004695493.1 339483707 10934427 complement(2477236..2477475) 1 NC_015731.1 hypothetical protein 2477475 10934427 Nit79A3_2322 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695493.1 2477236 R 261292 CDS YP_004695494.1 339483708 10934428 2477764..2478438 1 NC_015731.1 KEGG: nit:NAL212_0371 hypothetical protein; hypothetical protein 2478438 10934428 Nit79A3_2323 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695494.1 2477764 D 261292 CDS YP_004695495.1 339483709 10934429 2478624..2478818 1 NC_015731.1 KEGG: nit:NAL212_0372 hypothetical protein; hypothetical protein 2478818 10934429 Nit79A3_2324 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695495.1 2478624 D 261292 CDS YP_004695496.1 339483710 10934430 2478827..2480521 1 NC_015731.1 PFAM: Replication endonuclease, probable, phage; KEGG: nit:NAL212_0373 replication protein A; replication gene A 2480521 10934430 Nit79A3_2325 Nitrosomonas sp. Is79A3 replication gene A YP_004695496.1 2478827 D 261292 CDS YP_004695497.1 339483711 10934431 complement(2480524..2482404) 1 NC_015731.1 hypothetical protein 2482404 10934431 Nit79A3_2326 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695497.1 2480524 R 261292 CDS YP_004695498.1 339483712 10934432 complement(2482769..2482993) 1 NC_015731.1 hypothetical protein 2482993 10934432 Nit79A3_2327 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695498.1 2482769 R 261292 CDS YP_004695499.1 339483713 10934433 complement(2483888..2485144) 1 NC_015731.1 PFAM: Integrase, catalytic core, phage; KEGG: dar:Daro_1675 phage integrase; integrase 2485144 10934433 Nit79A3_2328 Nitrosomonas sp. Is79A3 integrase YP_004695499.1 2483888 R 261292 CDS YP_004695500.1 339483714 10934434 complement(2485350..2485802) 1 NC_015731.1 TIGRFAM: PAS; PFAM: PAS fold; KEGG: nit:NAL212_2384 PAS sensor protein; SMART: PAC motif; PAS; PAS sensor protein 2485802 10934434 Nit79A3_2329 Nitrosomonas sp. Is79A3 PAS sensor protein YP_004695500.1 2485350 R 261292 CDS YP_004695501.1 339483715 10934435 complement(2485864..2486343) 1 NC_015731.1 KEGG: nit:NAL212_2385 polyketide cyclase/dehydrase; polyketide cyclase/dehydrase 2486343 10934435 Nit79A3_2330 Nitrosomonas sp. Is79A3 polyketide cyclase/dehydrase YP_004695501.1 2485864 R 261292 CDS YP_004695502.1 339483716 10934436 complement(2486372..2487535) 1 NC_015731.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nit:NAL212_2386 FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2487535 10934436 Nit79A3_2331 Nitrosomonas sp. Is79A3 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004695502.1 2486372 R 261292 CDS YP_004695503.1 339483717 10934437 complement(2487729..2488622) 1 NC_015731.1 TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase; HAMAP: Glutamyl-Q tRNA(Asp) synthetase; KEGG: nit:NAL212_2387 glutamyl-Q tRNA(Asp) synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl-Q tRNA(Asp) synthetase 2488622 10934437 Nit79A3_2332 Nitrosomonas sp. Is79A3 Glutamyl-Q tRNA(Asp) synthetase YP_004695503.1 2487729 R 261292 CDS YP_004695504.1 339483718 10934438 2488807..2490195 1 NC_015731.1 KEGG: nit:NAL212_2390 UDP-N-acetylmuramate; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; UDP-N-acetylmuramate:l-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 2490195 10934438 Nit79A3_2333 Nitrosomonas sp. Is79A3 UDP-N-acetylmuramate:l-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_004695504.1 2488807 D 261292 CDS YP_004695505.1 339483719 10934439 complement(2490231..2490758) 1 NC_015731.1 TIGRFAM: Adenine phosphoribosyl transferase; HAMAP: Adenine phosphoribosyl transferase; KEGG: nit:NAL212_2391 adenine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; adenine phosphoribosyltransferase 2490758 10934439 Nit79A3_2334 Nitrosomonas sp. Is79A3 adenine phosphoribosyltransferase YP_004695505.1 2490231 R 261292 CDS YP_004695506.1 339483720 10934440 complement(2490885..2491982) 1 NC_015731.1 KEGG: nit:NAL212_2392 nitrite reductase, copper-containing; TIGRFAM: Nitrite reductase, copper containing; PFAM: Multicopper oxidase, type 1; Multicopper oxidase, type 3; nitrite reductase, copper-containing 2491982 10934440 Nit79A3_2335 Nitrosomonas sp. Is79A3 nitrite reductase, copper-containing YP_004695506.1 2490885 R 261292 CDS YP_004695507.1 339483721 10934441 complement(2492230..2494212) 1 NC_015731.1 KEGG: tbd:Tbd_0539 antiporter-2, CPA2 family monovalent cation/proton antiporter; TIGRFAM: K+/H+ exchanger; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; potassium efflux system protein 2494212 10934441 Nit79A3_2336 Nitrosomonas sp. Is79A3 potassium efflux system protein YP_004695507.1 2492230 R 261292 CDS YP_004695508.1 339483722 10934442 2494331..2495629 1 NC_015731.1 KEGG: nit:NAL212_2393 glutamate/cysteine ligase; TIGRFAM: Glutamate--cysteine ligase GshA; PFAM: Glutamate--cysteine ligase GshA; glutamate/cysteine ligase 2495629 10934442 Nit79A3_2337 Nitrosomonas sp. Is79A3 glutamate/cysteine ligase YP_004695508.1 2494331 D 261292 CDS YP_004695509.1 339483723 10934443 2495637..2496584 1 NC_015731.1 TIGRFAM: Glutathione synthetase, prokaryotic; HAMAP: Glutathione synthetase, prokaryotic; KEGG: nit:NAL212_2394 glutathione synthetase; PFAM: Prokaryotic glutathione synthetase, ATP-binding; Prokaryotic glutathione synthetase, N-terminal; Glutathione synthetase 2496584 10934443 Nit79A3_2338 Nitrosomonas sp. Is79A3 Glutathione synthetase YP_004695509.1 2495637 D 261292 CDS YP_004695510.1 339483724 10934444 complement(2496633..2498462) 1 NC_015731.1 TIGRFAM: Peptidase M41, FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; KEGG: nit:NAL212_2396 ATP-dependent metalloprotease FtsH; SMART: ATPase, AAA+ type, core; ATP-dependent metalloprotease FtsH 2498462 10934444 Nit79A3_2339 Nitrosomonas sp. Is79A3 ATP-dependent metalloprotease FtsH YP_004695510.1 2496633 R 261292 CDS YP_004695511.1 339483725 10934445 complement(2498603..2499886) 1 NC_015731.1 PFAM: Membrane protein, aromatic hydrocarbon degradation; KEGG: nit:NAL212_2397 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 2499886 10934445 Nit79A3_2340 Nitrosomonas sp. Is79A3 aromatic hydrocarbon degradation membrane protein YP_004695511.1 2498603 R 261292 CDS YP_004695512.1 339483726 10934446 2500285..2502825 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: nit:NAL212_2398 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2502825 10934446 Nit79A3_2341 Nitrosomonas sp. Is79A3 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004695512.1 2500285 D 261292 CDS YP_004695513.1 339483727 10934447 2502815..2502964 1 NC_015731.1 hypothetical protein 2502964 10934447 Nit79A3_2342 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695513.1 2502815 D 261292 CDS YP_004695514.1 339483728 10934448 2503122..2504069 1 NC_015731.1 SMART: LamG-like jellyroll fold; KEGG: glo:Glov_2915 cell wall/surface repeat protein; LamG domain-containing protein jellyroll fold domain-containing protein 2504069 10934448 Nit79A3_2343 Nitrosomonas sp. Is79A3 LamG domain-containing protein jellyroll fold domain-containing protein YP_004695514.1 2503122 D 261292 CDS YP_004695515.1 339483729 10934449 complement(2504419..2505588) 1 NC_015731.1 PFAM: Aminotransferase, class I/II; KEGG: nit:NAL212_2291 cystathionine beta-lyase; class I and II aminotransferase 2505588 10934449 Nit79A3_2344 Nitrosomonas sp. Is79A3 class I and II aminotransferase YP_004695515.1 2504419 R 261292 CDS YP_004695516.1 339483730 10934450 complement(2505585..2507789) 1 NC_015731.1 PFAM: Sulphatase-modifying factor; Methyltransferase type 12; KEGG: nit:NAL212_2290 sulfatase-modifying factor protein; sulfatase-modifying factor protein 2507789 10934450 Nit79A3_2345 Nitrosomonas sp. Is79A3 sulfatase-modifying factor protein YP_004695516.1 2505585 R 261292 CDS YP_004695517.1 339483731 10934451 2507829..2508518 1 NC_015731.1 PFAM: Protein of unknown function DUF2064; KEGG: nit:NAL212_2036 hypothetical protein; hypothetical protein 2508518 10934451 Nit79A3_2346 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695517.1 2507829 D 261292 CDS YP_004695518.1 339483732 10934452 2508511..2509200 1 NC_015731.1 PFAM: Glycosyl transferase, family 2; KEGG: nit:NAL212_2035 glycosyl transferase 2; glycosyl transferase 2 2509200 10934452 Nit79A3_2347 Nitrosomonas sp. Is79A3 glycosyl transferase 2 YP_004695518.1 2508511 D 261292 CDS YP_004695519.1 339483733 10934453 2509240..2510286 1 NC_015731.1 PFAM: Methyltransferase type 11; KEGG: nit:NAL212_2034 arsenite methyltransferase; type 11 methyltransferase 2510286 10934453 Nit79A3_2348 Nitrosomonas sp. Is79A3 type 11 methyltransferase YP_004695519.1 2509240 D 261292 CDS YP_004695520.1 339483734 10934454 2510289..2511242 1 NC_015731.1 PFAM: Radical SAM; KEGG: nit:NAL212_2033 radical SAM domain-containing protein; Radical SAM domain-containing protein 2511242 10934454 Nit79A3_2349 Nitrosomonas sp. Is79A3 Radical SAM domain-containing protein YP_004695520.1 2510289 D 261292 CDS YP_004695521.1 339483735 10934455 2511245..2513395 1 NC_015731.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SNARE associated Golgi protein; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; KEGG: nit:NAL212_1630 dihydrolipoyl dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2513395 10934455 Nit79A3_2350 Nitrosomonas sp. Is79A3 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004695521.1 2511245 D 261292 CDS YP_004695522.1 339483736 10934456 2513358..2513648 1 NC_015731.1 hypothetical protein 2513648 10934456 Nit79A3_2351 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695522.1 2513358 D 261292 CDS YP_004695523.1 339483737 10934457 complement(2513640..2516951) 1 NC_015731.1 PFAM: Metallophosphoesterase; KEGG: pph:Ppha_1047 signal transduction protein with NACHT domain; metallophosphoesterase 2516951 10934457 Nit79A3_2352 Nitrosomonas sp. Is79A3 metallophosphoesterase YP_004695523.1 2513640 R 261292 CDS YP_004695524.1 339483738 10934458 complement(2517220..2517420) 1 NC_015731.1 PFAM: YcfA-like; KEGG: cyc:PCC7424_4650 YcfA family protein; hypothetical protein 2517420 10934458 Nit79A3_2353 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695524.1 2517220 R 261292 CDS YP_004695525.1 339483739 10934459 complement(2517413..2517619) 1 NC_015731.1 PFAM: Uncharacterised protein family UPF0150; KEGG: neu:NE1268 hypothetical protein; hypothetical protein 2517619 10934459 Nit79A3_2354 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695525.1 2517413 R 261292 CDS YP_004695526.1 339483740 10934460 2517824..2518408 1 NC_015731.1 PFAM: AMP-dependent synthetase/ligase; KEGG: dps:DP1202 acyl-CoA synthetase; AMP-dependent synthetase/ligase 2518408 10934460 Nit79A3_2355 Nitrosomonas sp. Is79A3 AMP-dependent synthetase/ligase YP_004695526.1 2517824 D 261292 CDS YP_004695527.1 339483741 10934461 complement(2518585..2519052) 1 NC_015731.1 KEGG: nit:NAL212_3095 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein; bacterioferritin 2519052 10934461 Nit79A3_2356 Nitrosomonas sp. Is79A3 bacterioferritin YP_004695527.1 2518585 R 261292 CDS YP_004695528.1 339483742 10934462 complement(2519258..2520481) 1 NC_015731.1 PFAM: Aminotransferase, class I/II; KEGG: sat:SYN_00565 2-amino-3-ketobutyrate coenzyme A ligase; class I and II aminotransferase 2520481 10934462 Nit79A3_2357 Nitrosomonas sp. Is79A3 class I and II aminotransferase YP_004695528.1 2519258 R 261292 CDS YP_004695529.1 339483743 10934463 complement(2520494..2521450) 1 NC_015731.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: sat:SYN_00564 L-threonine 3-dehydrogenase; NAD-dependent epimerase/dehydratase 2521450 10934463 Nit79A3_2358 Nitrosomonas sp. Is79A3 NAD-dependent epimerase/dehydratase YP_004695529.1 2520494 R 261292 CDS YP_004695530.1 339483744 10934464 2521815..2522177 1 NC_015731.1 KEGG: nit:NAL212_2722 hypothetical protein; hypothetical protein 2522177 10934464 Nit79A3_2359 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695530.1 2521815 D 261292 CDS YP_004695531.1 339483745 10934465 2522425..2523045 1 NC_015731.1 KEGG: azl:AZL_d03580 glycoside hydrolase; PFAM: Glycoside hydrolase, family 25; SMART: Glycoside hydrolase, family 25 subgroup; glycoside hydrolase 25 2523045 10934465 Nit79A3_2360 Nitrosomonas sp. Is79A3 glycoside hydrolase 25 YP_004695531.1 2522425 D 261292 CDS YP_004695532.1 339483746 10934466 complement(2523125..2523487) 1 NC_015731.1 KEGG: net:Neut_0707 transcriptional regulator, LysR family protein; hypothetical protein 2523487 10934466 Nit79A3_2361 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695532.1 2523125 R 261292 CDS YP_004695533.1 339483747 10934467 complement(2523956..2524138) 1 NC_015731.1 KEGG: nit:NAL212_1979 hypothetical protein; hypothetical protein 2524138 10934467 Nit79A3_2362 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695533.1 2523956 R 261292 CDS YP_004695534.1 339483748 10934468 complement(2524261..2526060) 1 NC_015731.1 TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: nit:NAL212_1980 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; ATP-dependent DNA helicase RecQ 2526060 10934468 Nit79A3_2363 Nitrosomonas sp. Is79A3 ATP-dependent DNA helicase RecQ YP_004695534.1 2524261 R 261292 CDS YP_004695535.1 339483749 10934469 complement(2526072..2526311) 1 NC_015731.1 hypothetical protein 2526311 10934469 Nit79A3_2364 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695535.1 2526072 R 261292 CDS YP_004695536.1 339483750 10934470 2526388..2527797 1 NC_015731.1 KEGG: nit:NAL212_1981 glutamine synthetase, type I; TIGRFAM: Glutamine synthetase type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp; glutamine synthetase, type I 2527797 10934470 Nit79A3_2365 Nitrosomonas sp. Is79A3 glutamine synthetase, type I YP_004695536.1 2526388 D 261292 CDS YP_004695537.1 339483751 10934471 2528169..2528597 1 NC_015731.1 KEGG: nit:NAL212_1982 hypothetical protein; hypothetical protein 2528597 10934471 Nit79A3_2366 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695537.1 2528169 D 261292 CDS YP_004695538.1 339483752 10934472 2528635..2529084 1 NC_015731.1 KEGG: nit:NAL212_1983 hypothetical protein; hypothetical protein 2529084 10934472 Nit79A3_2367 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695538.1 2528635 D 261292 CDS YP_004695539.1 339483753 10934473 complement(2529258..2530031) 1 NC_015731.1 KEGG: nit:NAL212_1984 exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III 2530031 10934473 Nit79A3_2368 Nitrosomonas sp. Is79A3 exodeoxyribonuclease III YP_004695539.1 2529258 R 261292 CDS YP_004695540.1 339483754 10934474 complement(2530117..2530275) 1 NC_015731.1 KEGG: mgm:Mmc1_3076 hypothetical protein; hypothetical protein 2530275 10934474 Nit79A3_2369 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695540.1 2530117 R 261292 CDS YP_004695541.1 339483755 10934475 complement(2530347..2532281) 1 NC_015731.1 SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal; KEGG: nit:NAL212_1985 DEAD/DEAH box helicase domain-containing protein; helicase c2 2532281 10934475 Nit79A3_2370 Nitrosomonas sp. Is79A3 helicase c2 YP_004695541.1 2530347 R 261292 CDS YP_004695542.1 339483756 10934476 complement(2532534..2532836) 1 NC_015731.1 KEGG: nit:NAL212_1986 hypothetical protein; HAMAP: Protein rnfH; PFAM: Uncharacterised protein family UPF0125; Protein rnfH 2532836 10934476 Nit79A3_2371 Nitrosomonas sp. Is79A3 Protein rnfH YP_004695542.1 2532534 R 261292 CDS YP_004695543.1 339483757 10934477 complement(2532833..2533270) 1 NC_015731.1 PFAM: Streptomyces cyclase/dehydrase; KEGG: nit:NAL212_1987 cyclase/dehydrase; cyclase 2533270 10934477 Nit79A3_2372 Nitrosomonas sp. Is79A3 cyclase YP_004695543.1 2532833 R 261292 CDS YP_004695544.1 339483758 10934478 2533361..2533804 1 NC_015731.1 TIGRFAM: SsrA-binding protein; HAMAP: SsrA-binding protein; KEGG: nit:NAL212_1988 SsrA-binding protein; PFAM: SsrA-binding protein; SsrA-binding protein 2533804 10934478 Nit79A3_2373 Nitrosomonas sp. Is79A3 SsrA-binding protein YP_004695544.1 2533361 D 261292 CDS YP_004695545.1 339483759 10934479 2533865..2534878 1 NC_015731.1 KEGG: nit:NAL212_1989 heme A synthase; HAMAP: Heme A synthase; PFAM: Cytochrome oxidase assembly; Heme A synthase 2534878 10934479 Nit79A3_2374 Nitrosomonas sp. Is79A3 Heme A synthase YP_004695545.1 2533865 D 261292 CDS YP_004695546.1 339483760 10934480 complement(2534969..2536384) 1 NC_015731.1 KEGG: nit:NAL212_2313 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; Fis family transcriptional regulator 2536384 10934480 Nit79A3_2375 Nitrosomonas sp. Is79A3 Fis family transcriptional regulator YP_004695546.1 2534969 R 261292 CDS YP_004695547.1 339483761 10934481 complement(2536375..2538021) 1 NC_015731.1 KEGG: nit:NAL212_2312 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 2538021 10934481 Nit79A3_2376 Nitrosomonas sp. Is79A3 integral membrane sensor signal transduction histidine kinase YP_004695547.1 2536375 R 261292 CDS YP_004695548.1 339483762 10934482 complement(2538032..2538292) 1 NC_015731.1 KEGG: nit:NAL212_2311 hypothetical protein; hypothetical protein 2538292 10934482 Nit79A3_2377 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695548.1 2538032 R 261292 CDS YP_004695549.1 339483763 10934483 complement(2538736..2539704) 1 NC_015731.1 KEGG: nit:NAL212_1045 trans-hexaprenyltranstransferase; manually curated; PFAM: Polyprenyl synthetase; polyprenyl synthetase 2539704 10934483 Nit79A3_2378 Nitrosomonas sp. Is79A3 polyprenyl synthetase YP_004695549.1 2538736 R 261292 CDS YP_004695550.1 339483764 10934484 2539852..2540163 1 NC_015731.1 TIGRFAM: Ribosomal protein L21; HAMAP: Ribosomal protein L21; KEGG: nit:NAL212_1044 50S ribosomal protein L21; PFAM: Ribosomal protein L21; 50S ribosomal protein L21 2540163 10934484 Nit79A3_2379 Nitrosomonas sp. Is79A3 50S ribosomal protein L21 YP_004695550.1 2539852 D 261292 CDS YP_004695551.1 339483765 10934485 2540174..2540431 1 NC_015731.1 TIGRFAM: Ribosomal protein L27; HAMAP: Ribosomal protein L27; KEGG: nit:NAL212_1043 50S ribosomal protein L27; PFAM: Ribosomal protein L27; 50S ribosomal protein L27 2540431 10934485 Nit79A3_2380 Nitrosomonas sp. Is79A3 50S ribosomal protein L27 YP_004695551.1 2540174 D 261292 CDS YP_004695552.1 339483766 10934486 2540536..2541597 1 NC_015731.1 TIGRFAM: GTP-binding protein Obg/CgtA; HAMAP: GTPase obg; KEGG: nit:NAL212_1042 GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; GTPase obg 2541597 10934486 Nit79A3_2381 Nitrosomonas sp. Is79A3 GTPase obg YP_004695552.1 2540536 D 261292 CDS YP_004695553.1 339483767 10934487 2541594..2542703 1 NC_015731.1 SMART: Pseudouridine synthase/archaeosine transglycosylase; TIGRFAM: Glutamate 5-kinase, ProB-related; KEGG: nit:NAL212_1041 glutamate 5-kinase; HAMAP: Glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; Glutamate 5-kinase 2542703 10934487 Nit79A3_2382 Nitrosomonas sp. Is79A3 Glutamate 5-kinase YP_004695553.1 2541594 D 261292 CDS YP_004695554.1 339483768 10934488 2542769..2543881 1 NC_015731.1 KEGG: nit:NAL212_1040 hypothetical protein; hypothetical protein 2543881 10934488 Nit79A3_2383 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695554.1 2542769 D 261292 CDS YP_004695555.1 339483769 10934489 2543941..2545983 1 NC_015731.1 PFAM: NAD+ synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rrs:RoseRS_2679 NAD synthetase; NAD synthetase 2545983 10934489 Nit79A3_2384 Nitrosomonas sp. Is79A3 NAD synthetase YP_004695555.1 2543941 D 261292 CDS YP_004695556.1 339483770 10934490 complement(2546061..2546987) 1 NC_015731.1 KEGG: pbs:Plabr_1147 hypothetical protein; hypothetical protein 2546987 10934490 Nit79A3_2385 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695556.1 2546061 R 261292 CDS YP_004695557.1 339483771 10934491 complement(2547196..2548242) 1 NC_015731.1 hypothetical protein 2548242 10934491 Nit79A3_2386 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695557.1 2547196 R 261292 CDS YP_004695558.1 339483772 10934492 complement(2548351..2548536) 1 NC_015731.1 PFAM: Protein of unknown function DUF2130; KEGG: rfr:Rfer_0075 hypothetical protein; hypothetical protein 2548536 10934492 Nit79A3_2387 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695558.1 2548351 R 261292 CDS YP_004695559.1 339483773 10934493 2549072..2549434 1 NC_015731.1 KEGG: nit:NAL212_2030 hypothetical protein; hypothetical protein 2549434 10934493 Nit79A3_2388 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695559.1 2549072 D 261292 CDS YP_004695560.1 339483774 10934494 complement(2549526..2551958) 1 NC_015731.1 hypothetical protein 2551958 10934494 Nit79A3_2389 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695560.1 2549526 R 261292 CDS YP_004695561.1 339483775 10934495 complement(2551961..2552275) 1 NC_015731.1 hypothetical protein 2552275 10934495 Nit79A3_2390 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695561.1 2551961 R 261292 CDS YP_004695562.1 339483776 10934496 complement(2552337..2552855) 1 NC_015731.1 hypothetical protein 2552855 10934496 Nit79A3_2391 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695562.1 2552337 R 261292 CDS YP_004695563.1 339483777 10934497 complement(2552895..2553218) 1 NC_015731.1 KEGG: net:Neut_1453 hypothetical protein; hypothetical protein 2553218 10934497 Nit79A3_2392 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695563.1 2552895 R 261292 CDS YP_004695564.1 339483778 10934498 complement(2553235..2553531) 1 NC_015731.1 hypothetical protein 2553531 10934498 Nit79A3_2393 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695564.1 2553235 R 261292 CDS YP_004695565.1 339483779 10934499 complement(2553595..2554152) 1 NC_015731.1 KEGG: bge:BC1002_6565 hypothetical protein; hypothetical protein 2554152 10934499 Nit79A3_2394 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695565.1 2553595 R 261292 CDS YP_004695566.1 339483780 10934500 complement(2554154..2555872) 1 NC_015731.1 KEGG: bcm:Bcenmc03_6476 YadA domain-containing protein; hypothetical protein 2555872 10934500 Nit79A3_2395 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695566.1 2554154 R 261292 CDS YP_004695567.1 339483781 10934501 complement(2555876..2556814) 1 NC_015731.1 KEGG: bav:BAV1474 phage protein; hypothetical protein 2556814 10934501 Nit79A3_2396 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695567.1 2555876 R 261292 CDS YP_004695568.1 339483782 10934502 complement(2556811..2560398) 1 NC_015731.1 PFAM: Phage tail tape measure protein TP901, core region; KEGG: mms:mma_2719 tail length tape measure protein; tail tape measure protein TP901 core region 2560398 10934502 Nit79A3_2397 Nitrosomonas sp. Is79A3 tail tape measure protein TP901 core region YP_004695568.1 2556811 R 261292 CDS YP_004695569.1 339483783 10934503 complement(2560398..2560751) 1 NC_015731.1 PFAM: Protein of unknown function DUF1799, phage-related; KEGG: hypothetical protein; hypothetical protein 2560751 10934503 Nit79A3_2398 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695569.1 2560398 R 261292 CDS YP_004695570.1 339483784 10934504 complement(2560769..2561095) 1 NC_015731.1 PFAM: Protein of unknown function DUF1789; hypothetical protein 2561095 10934504 Nit79A3_2399 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695570.1 2560769 R 261292 CDS YP_004695571.1 339483785 10934505 complement(2561151..2562083) 1 NC_015731.1 KEGG: bpy:Bphyt_1177 hypothetical protein; hypothetical protein 2562083 10934505 Nit79A3_2400 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695571.1 2561151 R 261292 CDS YP_004695572.1 339483786 10934506 complement(2562096..2562440) 1 NC_015731.1 hypothetical protein 2562440 10934506 Nit79A3_2401 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695572.1 2562096 R 261292 CDS YP_004695573.1 339483787 10934507 complement(2562455..2562937) 1 NC_015731.1 TIGRFAM: Phage protein, HK97, gp10; KEGG: bmj:BMULJ_04631 bacteriophage protein; phage protein, HK97 gp10 family 2562937 10934507 Nit79A3_2402 Nitrosomonas sp. Is79A3 phage protein, HK97 gp10 family YP_004695573.1 2562455 R 261292 CDS YP_004695574.1 339483788 10934508 complement(2562927..2563274) 1 NC_015731.1 TIGRFAM: Conserved hypothetical protein CHP01563; KEGG: phage head-tail adaptor; phage head-tail adaptor 2563274 10934508 Nit79A3_2403 Nitrosomonas sp. Is79A3 phage head-tail adaptor YP_004695574.1 2562927 R 261292 CDS YP_004695575.1 339483789 10934509 complement(2563275..2563844) 1 NC_015731.1 KEGG: net:Neut_1467 hypothetical protein; hypothetical protein 2563844 10934509 Nit79A3_2404 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695575.1 2563275 R 261292 CDS YP_004695576.1 339483790 10934510 complement(2563902..2564177) 1 NC_015731.1 hypothetical protein 2564177 10934510 Nit79A3_2405 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695576.1 2563902 R 261292 CDS YP_004695577.1 339483791 10934511 complement(2564191..2564406) 1 NC_015731.1 hypothetical protein 2564406 10934511 Nit79A3_2406 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695577.1 2564191 R 261292 CDS YP_004695578.1 339483792 10934512 complement(2564480..2564902) 1 NC_015731.1 KEGG: mpt:Mpe_A0539 hypothetical protein; hypothetical protein 2564902 10934512 Nit79A3_2407 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695578.1 2564480 R 261292 CDS YP_004695579.1 339483793 10934513 complement(2564973..2566346) 1 NC_015731.1 KEGG: dbr:Deba_2547 phage major capsid protein, HK97 family; TIGRFAM: Phage major capsid protein, HK97; PFAM: Phage major capsid protein, HK97; phage major capsid protein, HK97 family 2566346 10934513 Nit79A3_2408 Nitrosomonas sp. Is79A3 phage major capsid protein, HK97 family YP_004695579.1 2564973 R 261292 CDS YP_004695580.1 339483794 10934514 complement(2566362..2567060) 1 NC_015731.1 KEGG: dvm:DvMF_1656 phage prohead protease, HK97 family; TIGRFAM: Peptidase U35, phage prohead HK97; PFAM: Peptidase U35, phage prohead HK97; phage prohead protease, HK97 family 2567060 10934514 Nit79A3_2409 Nitrosomonas sp. Is79A3 phage prohead protease, HK97 family YP_004695580.1 2566362 R 261292 CDS YP_004695581.1 339483795 10934515 complement(2567053..2568351) 1 NC_015731.1 KEGG: dbr:Deba_2549 phage portal protein, HK97 family; TIGRFAM: Phage portal protein, HK97; PFAM: Phage portal protein; phage portal protein, HK97 family 2568351 10934515 Nit79A3_2410 Nitrosomonas sp. Is79A3 phage portal protein, HK97 family YP_004695581.1 2567053 R 261292 CDS YP_004695582.1 339483796 10934516 complement(2568366..2570090) 1 NC_015731.1 PFAM: Phage Terminase; KEGG: dbr:Deba_2550 terminase; Terminase 2570090 10934516 Nit79A3_2411 Nitrosomonas sp. Is79A3 Terminase YP_004695582.1 2568366 R 261292 CDS YP_004695583.1 339483797 10934517 complement(2570075..2570593) 1 NC_015731.1 KEGG: dvu:DVU1504 terminase small subunit; TIGRFAM: Phage terminase, small subunit, , P27; PFAM: Phage terminase, small subunit, , P27; phage terminase, small subunit P27 family 2570593 10934517 Nit79A3_2412 Nitrosomonas sp. Is79A3 phage terminase, small subunit P27 family YP_004695583.1 2570075 R 261292 CDS YP_004695584.1 339483798 10934518 complement(2570688..2571113) 1 NC_015731.1 manually curated; PFAM: HNH endonuclease; KEGG: bss:BSUW23_09635 HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 2571113 10934518 Nit79A3_2413 Nitrosomonas sp. Is79A3 HNH endonuclease YP_004695584.1 2570688 R 261292 CDS YP_004695585.1 339483799 10934519 complement(2571237..2571662) 1 NC_015731.1 KEGG: net:Neut_1475 hypothetical protein; hypothetical protein 2571662 10934519 Nit79A3_2414 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695585.1 2571237 R 261292 CDS YP_004695586.1 339483800 10934520 complement(2571676..2571882) 1 NC_015731.1 hypothetical protein 2571882 10934520 Nit79A3_2415 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695586.1 2571676 R 261292 CDS YP_004695587.1 339483801 10934521 complement(2571872..2572099) 1 NC_015731.1 hypothetical protein 2572099 10934521 Nit79A3_2416 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695587.1 2571872 R 261292 CDS YP_004695588.1 339483802 10934522 complement(2572381..2574750) 1 NC_015731.1 PFAM: Virulence-associated E; KEGG: net:Neut_1478 virulence-associated E family protein; virulence-associated E family protein 2574750 10934522 Nit79A3_2417 Nitrosomonas sp. Is79A3 virulence-associated E family protein YP_004695588.1 2572381 R 261292 CDS YP_004695589.1 339483803 10934523 complement(2574754..2575134) 1 NC_015731.1 hypothetical protein 2575134 10934523 Nit79A3_2418 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695589.1 2574754 R 261292 CDS YP_004695590.1 339483804 10934524 complement(2575134..2575463) 1 NC_015731.1 hypothetical protein 2575463 10934524 Nit79A3_2419 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695590.1 2575134 R 261292 CDS YP_004695591.1 339483805 10934525 complement(2575465..2575569) 1 NC_015731.1 hypothetical protein 2575569 10934525 Nit79A3_2420 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695591.1 2575465 R 261292 CDS YP_004695592.1 339483806 10934526 complement(2575566..2576036) 1 NC_015731.1 KEGG: bmj:BMULJ_04653 bacteriophage protein; hypothetical protein 2576036 10934526 Nit79A3_2421 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695592.1 2575566 R 261292 CDS YP_004695593.1 339483807 10934527 2576190..2576474 1 NC_015731.1 hypothetical protein 2576474 10934527 Nit79A3_2422 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695593.1 2576190 D 261292 CDS YP_004695594.1 339483808 10934528 complement(2576736..2577026) 1 NC_015731.1 KEGG: abm:ABSDF1321 hypothetical protein; hypothetical protein 2577026 10934528 Nit79A3_2423 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695594.1 2576736 R 261292 CDS YP_004695595.1 339483809 10934529 2577124..2577504 1 NC_015731.1 KEGG: ppg:PputGB1_3443 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 2577504 10934529 Nit79A3_2424 Nitrosomonas sp. Is79A3 helix-turn-helix domain-containing protein YP_004695595.1 2577124 D 261292 CDS YP_004695596.1 339483810 10934530 2577573..2577989 1 NC_015731.1 KEGG: nit:NAL212_2567 nuclease (SNase domain-containing protein); PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like); nuclease 2577989 10934530 Nit79A3_2425 Nitrosomonas sp. Is79A3 nuclease YP_004695596.1 2577573 D 261292 CDS YP_004695597.1 339483811 10934531 2578406..2579275 1 NC_015731.1 KEGG: sit:TM1040_1659 hypothetical protein; hypothetical protein 2579275 10934531 Nit79A3_2426 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695597.1 2578406 D 261292 CDS YP_004695598.1 339483812 10934532 complement(2579803..2580321) 1 NC_015731.1 hypothetical protein 2580321 10934532 Nit79A3_2427 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695598.1 2579803 R 261292 CDS YP_004695599.1 339483813 10934533 2580387..2580659 1 NC_015731.1 hypothetical protein 2580659 10934533 Nit79A3_2428 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695599.1 2580387 D 261292 CDS YP_004695600.1 339483814 10934534 2580951..2581250 1 NC_015731.1 hypothetical protein 2581250 10934534 Nit79A3_2429 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695600.1 2580951 D 261292 CDS YP_004695601.1 339483815 10934535 2581312..2581653 1 NC_015731.1 KEGG: rsc:RCFBP_20372 hypothetical protein; hypothetical protein 2581653 10934535 Nit79A3_2430 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695601.1 2581312 D 261292 CDS YP_004695602.1 339483816 10934536 2581656..2582510 1 NC_015731.1 PFAM: Protein of unknown function DUF2303; KEGG: rsc:RCFBP_20373 hypothetical protein; hypothetical protein 2582510 10934536 Nit79A3_2431 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695602.1 2581656 D 261292 CDS YP_004695603.1 339483817 10934537 2582553..2583140 1 NC_015731.1 KEGG: tkm:TK90_2683 hypothetical protein; hypothetical protein 2583140 10934537 Nit79A3_2432 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695603.1 2582553 D 261292 CDS YP_004695604.1 339483818 10934538 2583137..2583319 1 NC_015731.1 hypothetical protein 2583319 10934538 Nit79A3_2433 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695604.1 2583137 D 261292 CDS YP_004695605.1 339483819 10934539 2583336..2584316 1 NC_015731.1 KEGG: srt:Srot_1186 hypothetical protein; hypothetical protein 2584316 10934539 Nit79A3_2434 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695605.1 2583336 D 261292 CDS YP_004695606.1 339483820 10934540 2584586..2584765 1 NC_015731.1 hypothetical protein 2584765 10934540 Nit79A3_2435 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695606.1 2584586 D 261292 CDS YP_004695607.1 339483821 10934541 2584830..2586047 1 NC_015731.1 PFAM: AntA/AntB antirepressor; KEGG: ect:ECIAI39_2659 phage anti-repressor protein; AntA/AntB antirepressor domain-containing protein 2586047 10934541 Nit79A3_2436 Nitrosomonas sp. Is79A3 AntA/AntB antirepressor domain-containing protein YP_004695607.1 2584830 D 261292 CDS YP_004695608.1 339483822 10934542 2586312..2586620 1 NC_015731.1 hypothetical protein 2586620 10934542 Nit79A3_2437 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695608.1 2586312 D 261292 CDS YP_004695609.1 339483823 10934543 2586628..2586885 1 NC_015731.1 hypothetical protein 2586885 10934543 Nit79A3_2438 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695609.1 2586628 D 261292 CDS YP_004695610.1 339483824 10934544 2586885..2587331 1 NC_015731.1 KEGG: nit:NAL212_0698 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding; single-strand binding protein 2587331 10934544 Nit79A3_2439 Nitrosomonas sp. Is79A3 single-strand binding protein YP_004695610.1 2586885 D 261292 CDS YP_004695611.1 339483825 10934545 2587374..2587589 1 NC_015731.1 hypothetical protein 2587589 10934545 Nit79A3_2440 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695611.1 2587374 D 261292 CDS YP_004695612.1 339483826 10934546 2587586..2588593 1 NC_015731.1 PFAM: Integrase, catalytic core, phage; KEGG: meh:M301_0128 integrase; integrase 2588593 10934546 Nit79A3_2441 Nitrosomonas sp. Is79A3 integrase YP_004695612.1 2587586 D 261292 CDS YP_004695613.1 339483827 10934547 complement(2588650..2589516) 1 NC_015731.1 KEGG: ote:Oter_2237 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein; hypothetical protein 2589516 10934547 Nit79A3_2442 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695613.1 2588650 R 261292 CDS YP_004695614.1 339483828 10934548 complement(2589733..2591013) 1 NC_015731.1 KEGG: nit:NAL212_1473 hypothetical protein; hypothetical protein 2591013 10934548 Nit79A3_2443 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695614.1 2589733 R 261292 CDS YP_004695615.1 339483829 10934549 complement(2591239..2593473) 1 NC_015731.1 KEGG: kko:Kkor_1038 hypothetical protein; hypothetical protein 2593473 10934549 Nit79A3_2444 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695615.1 2591239 R 261292 CDS YP_004695616.1 339483830 10934550 2594060..2594761 1 NC_015731.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: nit:NAL212_1471 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 2594761 10934550 Nit79A3_2445 Nitrosomonas sp. Is79A3 OmpA/MotB domain-containing protein YP_004695616.1 2594060 D 261292 CDS YP_004695617.1 339483831 10934551 2594761..2595972 1 NC_015731.1 SMART: ATPase, AAA+ type, core; KEGG: nit:NAL212_1470 type II secretion system protein E; ATPase AAA 2595972 10934551 Nit79A3_2446 Nitrosomonas sp. Is79A3 ATPase AAA YP_004695617.1 2594761 D 261292 CDS YP_004695618.1 339483832 10934552 complement(2596091..2596564) 1 NC_015731.1 TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; KEGG: nit:NAL212_1883 PEP motif anchor domain-containing protein; PEP motif anchor domain-containing protein 2596564 10934552 Nit79A3_2447 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004695618.1 2596091 R 261292 CDS YP_004695619.1 339483833 10934553 complement(2597047..2597529) 1 NC_015731.1 KEGG: nit:NAL212_1947 hypothetical protein; hypothetical protein 2597529 10934553 Nit79A3_2448 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695619.1 2597047 R 261292 CDS YP_004695620.1 339483834 10934554 complement(2597691..2597912) 1 NC_015731.1 KEGG: nit:NAL212_2797 hypothetical protein; hypothetical protein 2597912 10934554 Nit79A3_2449 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695620.1 2597691 R 261292 CDS YP_004695621.1 339483835 10934555 complement(2597997..2598581) 1 NC_015731.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: pca:Pcar_0660 cytosine/adenosine deaminase; CMP/dCMP deaminase zinc-binding protein 2598581 10934555 Nit79A3_2450 Nitrosomonas sp. Is79A3 CMP/dCMP deaminase zinc-binding protein YP_004695621.1 2597997 R 261292 CDS YP_004695622.1 339483836 10934556 2598927..2600846 1 NC_015731.1 KEGG: nit:NAL212_0997 hypothetical protein; hypothetical protein 2600846 10934556 Nit79A3_2451 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695622.1 2598927 D 261292 CDS YP_004695623.1 339483837 10934557 2600902..2602620 1 NC_015731.1 PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; KEGG: nit:NAL212_0996 sodium/hydrogen exchanger; sodium/hydrogen exchanger 2602620 10934557 Nit79A3_2452 Nitrosomonas sp. Is79A3 sodium/hydrogen exchanger YP_004695623.1 2600902 D 261292 CDS YP_004695624.1 339483838 10934558 2602686..2602988 1 NC_015731.1 KEGG: nit:NAL212_0995 hypothetical protein; hypothetical protein 2602988 10934558 Nit79A3_2453 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695624.1 2602686 D 261292 CDS YP_004695625.1 339483839 10934559 complement(2602985..2603389) 1 NC_015731.1 KEGG: nit:NAL212_0994 hypothetical protein; hypothetical protein 2603389 10934559 Nit79A3_2454 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695625.1 2602985 R 261292 CDS YP_004695626.1 339483840 10934560 2603594..2604871 1 NC_015731.1 KEGG: nit:NAL212_0993 NRAMP-family transporter; NRAMP-family transporter 2604871 10934560 Nit79A3_2455 Nitrosomonas sp. Is79A3 NRAMP-family transporter YP_004695626.1 2603594 D 261292 CDS YP_004695627.1 339483841 10934561 2604895..2606685 1 NC_015731.1 KEGG: nit:NAL212_0992 xenobiotic-transporting ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; ABC transporter 2606685 10934561 Nit79A3_2456 Nitrosomonas sp. Is79A3 ABC transporter YP_004695627.1 2604895 D 261292 CDS YP_004695628.1 339483842 10934562 2606997..2607857 1 NC_015731.1 TIGRFAM: flagellar motor stator protein MotA; KEGG: nit:NAL212_0991 flagellar motor stator protein MotA; flagellar motor stator protein MotA 2607857 10934562 Nit79A3_2457 Nitrosomonas sp. Is79A3 flagellar motor stator protein MotA YP_004695628.1 2606997 D 261292 CDS YP_004695629.1 339483843 10934563 2607899..2608825 1 NC_015731.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: nit:NAL212_0990 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 2608825 10934563 Nit79A3_2458 Nitrosomonas sp. Is79A3 OmpA/MotB domain-containing protein YP_004695629.1 2607899 D 261292 CDS YP_004695630.1 339483844 10934564 2608842..2609594 1 NC_015731.1 KEGG: nit:NAL212_0989 hypothetical protein; hypothetical protein 2609594 10934564 Nit79A3_2459 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695630.1 2608842 D 261292 CDS YP_004695631.1 339483845 10934565 complement(2609615..2610997) 1 NC_015731.1 KEGG: nit:NAL212_0988 cysteinyl-tRNA synthetase; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR; cysteinyl-tRNA synthetase 2610997 10934565 Nit79A3_2460 Nitrosomonas sp. Is79A3 cysteinyl-tRNA synthetase YP_004695631.1 2609615 R 261292 CDS YP_004695632.1 339483846 10934566 2611146..2611739 1 NC_015731.1 PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: nit:NAL212_0987 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 2611739 10934566 Nit79A3_2461 Nitrosomonas sp. Is79A3 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_004695632.1 2611146 D 261292 CDS YP_004695633.1 339483847 10934567 2611769..2612260 1 NC_015731.1 PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: nit:NAL212_0986 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 2612260 10934567 Nit79A3_2462 Nitrosomonas sp. Is79A3 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_004695633.1 2611769 D 261292 CDS YP_004695634.1 339483848 10934568 complement(2612325..2613500) 1 NC_015731.1 KEGG: nit:NAL212_0985 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; O-succinylhomoserine sulfhydrylase 2613500 10934568 Nit79A3_2463 Nitrosomonas sp. Is79A3 O-succinylhomoserine sulfhydrylase YP_004695634.1 2612325 R 261292 CDS YP_004695635.1 339483849 10934569 complement(2613614..2615134) 1 NC_015731.1 KEGG: nit:NAL212_0984 amidophosphoribosyltransferase; TIGRFAM: Amidophosphoribosyl transferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase; amidophosphoribosyltransferase 2615134 10934569 Nit79A3_2464 Nitrosomonas sp. Is79A3 amidophosphoribosyltransferase YP_004695635.1 2613614 R 261292 CDS YP_004695636.1 339483850 10934570 complement(2615254..2615760) 1 NC_015731.1 PFAM: Colicin V production protein; KEGG: nit:NAL212_0983 colicin V production protein; Colicin V production protein 2615760 10934570 Nit79A3_2465 Nitrosomonas sp. Is79A3 Colicin V production protein YP_004695636.1 2615254 R 261292 CDS YP_004695637.1 339483851 10934571 complement(2615862..2616551) 1 NC_015731.1 PFAM: Sporulation/cell division region, bacteria; KEGG: nit:NAL212_0982 sporulation domain-containing protein; Sporulation domain-containing protein 2616551 10934571 Nit79A3_2466 Nitrosomonas sp. Is79A3 Sporulation domain-containing protein YP_004695637.1 2615862 R 261292 CDS YP_004695638.1 339483852 10934572 complement(2616568..2617872) 1 NC_015731.1 KEGG: nit:NAL212_0981 FolC bifunctional protein; TIGRFAM: Folylpolyglutamate synthetase; PFAM: Mur ligase, central; Mur ligase, C-terminal; FolC bifunctional protein 2617872 10934572 Nit79A3_2467 Nitrosomonas sp. Is79A3 FolC bifunctional protein YP_004695638.1 2616568 R 261292 CDS YP_004695639.1 339483853 10934573 complement(2617931..2618800) 1 NC_015731.1 TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; KEGG: nit:NAL212_0980 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta 2618800 10934573 Nit79A3_2468 Nitrosomonas sp. Is79A3 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta YP_004695639.1 2617931 R 261292 CDS YP_004695640.1 339483854 10934574 complement(2618837..2619700) 1 NC_015731.1 TIGRFAM: Tryptophan synthase, alpha chain; HAMAP: Tryptophan synthase, alpha chain; KEGG: nit:NAL212_0979 tryptophan synthase, alpha subunit; PFAM: Tryptophan synthase, alpha chain; tryptophan synthase subunit alpha 2619700 10934574 Nit79A3_2469 Nitrosomonas sp. Is79A3 tryptophan synthase subunit alpha YP_004695640.1 2618837 R 261292 CDS YP_004695641.1 339483855 10934575 complement(2619766..2620965) 1 NC_015731.1 TIGRFAM: Tryptophan synthase, beta chain; HAMAP: Tryptophan synthase beta chain; KEGG: nit:NAL212_0978 tryptophan synthase beta chain; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; tryptophan synthase subunit beta 2620965 10934575 Nit79A3_2470 Nitrosomonas sp. Is79A3 tryptophan synthase subunit beta YP_004695641.1 2619766 R 261292 CDS YP_004695642.1 339483856 10934576 complement(2620962..2621579) 1 NC_015731.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: nit:NAL212_0977 phosphoribosylanthranilate isomerase; N-(5'-phosphoribosyl)anthranilate isomerase 2621579 10934576 Nit79A3_2471 Nitrosomonas sp. Is79A3 N-(5'-phosphoribosyl)anthranilate isomerase YP_004695642.1 2620962 R 261292 CDS YP_004695643.1 339483857 10934577 complement(2621605..2622402) 1 NC_015731.1 TIGRFAM: Pseudouridine synthase I, TruA; HAMAP: Pseudouridine synthase I, TruA; KEGG: nit:NAL212_0976 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; tRNA pseudouridine synthase A 2622402 10934577 Nit79A3_2472 Nitrosomonas sp. Is79A3 tRNA pseudouridine synthase A YP_004695643.1 2621605 R 261292 CDS YP_004695644.1 339483858 10934578 complement(2622467..2624977) 1 NC_015731.1 TIGRFAM: Motility protein FimV, N-terminal; Motility protein FimV, C-terminal; KEGG: nit:NAL212_0975 FimV N-terminal domain; FimV N-terminal domain-containing protein 2624977 10934578 Nit79A3_2473 Nitrosomonas sp. Is79A3 FimV N-terminal domain-containing protein YP_004695644.1 2622467 R 261292 CDS YP_004695645.1 339483859 10934579 complement(2625279..2626391) 1 NC_015731.1 KEGG: nit:NAL212_0974 aspartate-semialdehyde dehydrogenase; TIGRFAM: Aspartate-semialdehyde dehydrogenase, proteobacteria; PFAM: Semialdehyde dehydrogenase, dimerisation region; Semialdehyde dehydrogenase, NAD-binding; aspartate-semialdehyde dehydrogenase 2626391 10934579 Nit79A3_2474 Nitrosomonas sp. Is79A3 aspartate-semialdehyde dehydrogenase YP_004695645.1 2625279 R 261292 CDS YP_004695646.1 339483860 10934580 complement(2626550..2627611) 1 NC_015731.1 TIGRFAM: Isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; KEGG: nit:NAL212_0973 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 2627611 10934580 Nit79A3_2475 Nitrosomonas sp. Is79A3 3-isopropylmalate dehydrogenase YP_004695646.1 2626550 R 261292 CDS YP_004695647.1 339483861 10934581 complement(2627638..2628276) 1 NC_015731.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit region; HAMAP: 3-isopropylmalate dehydratase, small subunit region; KEGG: nit:NAL212_0972 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; 3-isopropylmalate dehydratase small subunit 2628276 10934581 Nit79A3_2476 Nitrosomonas sp. Is79A3 3-isopropylmalate dehydratase small subunit YP_004695647.1 2627638 R 261292 CDS YP_004695648.1 339483862 10934582 complement(2628293..2629702) 1 NC_015731.1 TIGRFAM: 3-isopropylmalate dehydratase, large subunit region; HAMAP: 3-isopropylmalate dehydratase, large subunit region; KEGG: nit:NAL212_0971 3-isopropylmalate dehydratase, large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; 3-isopropylmalate dehydratase large subunit 2629702 10934582 Nit79A3_2477 Nitrosomonas sp. Is79A3 3-isopropylmalate dehydratase large subunit YP_004695648.1 2628293 R 261292 CDS YP_004695649.1 339483863 10934583 complement(2629782..2630930) 1 NC_015731.1 PFAM: Major facilitator superfamily MFS-1; KEGG: nit:NAL212_0970 major facilitator transporter; major facilitator superfamily protein 2630930 10934583 Nit79A3_2478 Nitrosomonas sp. Is79A3 major facilitator superfamily protein YP_004695649.1 2629782 R 261292 CDS YP_004695650.1 339483864 10934584 2631425..2631844 1 NC_015731.1 PFAM: Rubrerythrin; KEGG: nit:NAL212_0969 rubrerythrin; Rubrerythrin 2631844 10934584 Nit79A3_2479 Nitrosomonas sp. Is79A3 Rubrerythrin YP_004695650.1 2631425 D 261292 CDS YP_004695651.1 339483865 10934585 2631959..2633947 1 NC_015731.1 KEGG: nit:NAL212_0968 hypothetical protein; hypothetical protein 2633947 10934585 Nit79A3_2480 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695651.1 2631959 D 261292 CDS YP_004695652.1 339483866 10934586 2633944..2634453 1 NC_015731.1 PFAM: Protein of unknown function CNP1-like; KEGG: nit:NAL212_0967 hypothetical protein; hypothetical protein 2634453 10934586 Nit79A3_2481 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695652.1 2633944 D 261292 CDS YP_004695653.1 339483867 10934587 complement(2634549..2644187) 1 NC_015731.1 KEGG: PA14 domain-containing protein; hypothetical protein 2644187 10934587 Nit79A3_2482 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695653.1 2634549 R 261292 CDS YP_004695654.1 339483868 10934588 2644582..2644836 1 NC_015731.1 KEGG: tkm:TK90_1567 transcriptional regulator, AbrB family; TIGRFAM: Transcription regulator AbrB; PFAM: Transcription regulator AbrB/SpoV, predicted; AbrB family transcriptional regulator 2644836 10934588 Nit79A3_2483 Nitrosomonas sp. Is79A3 AbrB family transcriptional regulator YP_004695654.1 2644582 D 261292 CDS YP_004695655.1 339483869 10934589 2644833..2645213 1 NC_015731.1 PFAM: PilT protein, N-terminal; KEGG: tkm:TK90_1566 PilT protein domain protein; twitching motility protein PilT 2645213 10934589 Nit79A3_2484 Nitrosomonas sp. Is79A3 twitching motility protein PilT YP_004695655.1 2644833 D 261292 CDS YP_004695656.1 339483870 10934590 2645271..2645471 1 NC_015731.1 hypothetical protein 2645471 10934590 Nit79A3_2485 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695656.1 2645271 D 261292 CDS YP_004695657.1 339483871 10934591 complement(2645692..2646222) 1 NC_015731.1 KEGG: nit:NAL212_0603 transposase IS200-family protein; transposase IS200-family protein 2646222 10934591 Nit79A3_2486 Nitrosomonas sp. Is79A3 transposase IS200-family protein YP_004695657.1 2645692 R 261292 CDS YP_004695658.1 339483872 10934592 complement(2646264..2646650) 1 NC_015731.1 KEGG: eba:ebB104 transposase, fragment; hypothetical protein 2646650 10934592 Nit79A3_2487 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695658.1 2646264 R 261292 CDS YP_004695659.1 339483873 10934594 complement(2654804..2655712) 1 NC_015731.1 KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 2655712 10934594 Nit79A3_2489 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004695659.1 2654804 R 261292 CDS YP_004695660.1 339483874 10934595 complement(2655709..2656032) 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein 2656032 10934595 Nit79A3_2490 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004695660.1 2655709 R 261292 CDS YP_004695661.1 339483875 10934596 2656776..2658149 1 NC_015731.1 PFAM: Ammonium transporter; KEGG: nit:NAL212_0965 ammonium transporter; ammonium transporter 2658149 10934596 Nit79A3_2491 Nitrosomonas sp. Is79A3 ammonium transporter YP_004695661.1 2656776 D 261292 CDS YP_004695662.1 339483876 10934597 complement(2658217..2658576) 1 NC_015731.1 PFAM: Helix-turn-helix, HxlR type; KEGG: nit:NAL212_0964 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 2658576 10934597 Nit79A3_2492 Nitrosomonas sp. Is79A3 HxlR family transcriptional regulator YP_004695662.1 2658217 R 261292 CDS YP_004695663.1 339483877 10934598 2658719..2659429 1 NC_015731.1 KEGG: nit:NAL212_0963 glutathione S-transferase; glutathione S-transferase 2659429 10934598 Nit79A3_2493 Nitrosomonas sp. Is79A3 glutathione S-transferase YP_004695663.1 2658719 D 261292 CDS YP_004695664.1 339483878 10934599 2659380..2659670 1 NC_015731.1 hypothetical protein 2659670 10934599 Nit79A3_2494 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695664.1 2659380 D 261292 CDS YP_004695665.1 339483879 10934600 complement(2659766..2661718) 1 NC_015731.1 KEGG: nit:NAL212_0461 Amylosucrase; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; alpha amylase 2661718 10934600 Nit79A3_2495 Nitrosomonas sp. Is79A3 alpha amylase YP_004695665.1 2659766 R 261292 CDS YP_004695666.1 339483880 10934601 complement(2661737..2663905) 1 NC_015731.1 TIGRFAM: Sucrose-phosphate synthase, glycosyltransferase region; HAD-superfamily hydrolase, subfamily IIB; Sucrose phosphate synthase, sucrose phosphatase-like region; KEGG: nit:NAL212_0460 sucrose-phosphate synthase; PFAM: Sucrose-6F-phosphate phosphohydrolase, plant/cyanobacteria; Glycosyl transferase, group 1; sucrose-phosphate synthase 2663905 10934601 Nit79A3_2496 Nitrosomonas sp. Is79A3 sucrose-phosphate synthase YP_004695666.1 2661737 R 261292 CDS YP_004695667.1 339483881 10934602 complement(2663902..2664816) 1 NC_015731.1 PFAM: Carbohydrate/purine kinase; KEGG: nit:NAL212_0459 PfkB domain-containing protein; PfkB domain-containing protein 2664816 10934602 Nit79A3_2497 Nitrosomonas sp. Is79A3 PfkB domain-containing protein YP_004695667.1 2663902 R 261292 CDS YP_004695668.1 339483882 10934603 complement(2664842..2665345) 1 NC_015731.1 PFAM: HPP; KEGG: nmu:Nmul_A0073 hypothetical protein; HPP family protein 2665345 10934603 Nit79A3_2498 Nitrosomonas sp. Is79A3 HPP family protein YP_004695668.1 2664842 R 261292 CDS YP_004695669.1 339483883 10934604 complement(2665565..2667073) 1 NC_015731.1 KEGG: nit:NAL212_2793 hypothetical protein; hypothetical protein 2667073 10934604 Nit79A3_2499 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695669.1 2665565 R 261292 CDS YP_004695670.1 339483884 10934605 2667239..2667532 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: gca:Galf_0832 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2667532 10934605 Nit79A3_2500 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004695670.1 2667239 D 261292 CDS YP_004695671.1 339483885 10934606 2667529..2668455 1 NC_015731.1 PFAM: Integrase, catalytic core; KEGG: rso:RSp0548 ISRSO8-transposase orfB protein; Integrase catalytic subunit 2668455 10934606 Nit79A3_2501 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004695671.1 2667529 D 261292 CDS YP_004695672.1 339483886 10934608 complement(2669754..2670842) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: psa:PST_2220 transposase; transposase IS4 family protein 2670842 10934608 Nit79A3_2503 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695672.1 2669754 R 261292 CDS YP_004695673.1 339483887 10934609 complement(2670941..2673277) 1 NC_015731.1 PFAM: Glucodextranase N; Glycoside hydrolase 15-related; KEGG: afr:AFE_2224 glycosyl hydrolase, family 15; Glucodextranase N 2673277 10934609 Nit79A3_2504 Nitrosomonas sp. Is79A3 Glucodextranase N YP_004695673.1 2670941 R 261292 CDS YP_004695674.1 339483888 10934610 complement(2673306..2675399) 1 NC_015731.1 KEGG: afw:Anae109_2025 transketolase; TIGRFAM: Transketolase, bacterial-like; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; transketolase 2675399 10934610 Nit79A3_2505 Nitrosomonas sp. Is79A3 transketolase YP_004695674.1 2673306 R 261292 CDS YP_004695675.1 339483889 10934611 complement(2675532..2676218) 1 NC_015731.1 PFAM: ROK; KEGG: nha:Nham_2098 polyphosphate glucokinase; ROK family protein 2676218 10934611 Nit79A3_2506 Nitrosomonas sp. Is79A3 ROK family protein YP_004695675.1 2675532 R 261292 CDS YP_004695676.1 339483890 10934612 complement(2676365..2677783) 1 NC_015731.1 KEGG: rfr:Rfer_4034 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: Glucose-6-phosphate dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 2677783 10934612 Nit79A3_2507 Nitrosomonas sp. Is79A3 glucose-6-phosphate 1-dehydrogenase YP_004695676.1 2676365 R 261292 CDS YP_004695677.1 339483891 10934613 complement(2677785..2678807) 1 NC_015731.1 KEGG: fri:FraEuI1c_1222 6-phosphogluconate dehydrogenase, decarboxylating; TIGRFAM: 6-phosphogluconate dehydrogenase related protein; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase 2678807 10934613 Nit79A3_2508 Nitrosomonas sp. Is79A3 6-phosphogluconate dehydrogenase YP_004695677.1 2677785 R 261292 CDS YP_004695678.1 339483892 10934614 complement(2679414..2679803) 1 NC_015731.1 KEGG: nmu:Nmul_A2165 hypothetical protein; hypothetical protein 2679803 10934614 Nit79A3_2509 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695678.1 2679414 R 261292 CDS YP_004695679.1 339483893 10934615 complement(2679899..2680783) 1 NC_015731.1 KEGG: nit:NAL212_2282 hypothetical protein; hypothetical protein 2680783 10934615 Nit79A3_2510 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695679.1 2679899 R 261292 CDS YP_004695680.1 339483894 10934616 complement(2680973..2681449) 1 NC_015731.1 KEGG: meh:M301_1660 hypothetical protein; hypothetical protein 2681449 10934616 Nit79A3_2511 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695680.1 2680973 R 261292 CDS YP_004695681.1 339483895 10934617 complement(2681446..2681646) 1 NC_015731.1 KEGG: meh:M301_1661 hypothetical protein; hypothetical protein 2681646 10934617 Nit79A3_2512 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695681.1 2681446 R 261292 CDS YP_004695682.1 339483896 10934618 2681909..2683360 1 NC_015731.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-3; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: nit:NAL212_2281 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS/PAC sensor signal transduction histidine kinase 2683360 10934618 Nit79A3_2513 Nitrosomonas sp. Is79A3 PAS/PAC sensor signal transduction histidine kinase YP_004695682.1 2681909 D 261292 CDS YP_004695683.1 339483897 10934619 complement(2683454..2685070) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: nit:NAL212_3145 IS5 family transposase; transposase IS4 family protein 2685070 10934619 Nit79A3_2514 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695683.1 2683454 R 261292 CDS YP_004695684.1 339483898 10934620 complement(2685467..2685778) 1 NC_015731.1 KEGG: nit:NAL212_2284 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 2685778 10934620 Nit79A3_2515 Nitrosomonas sp. Is79A3 nitrogen regulatory protein P-II YP_004695684.1 2685467 R 261292 CDS YP_004695685.1 339483899 10934621 complement(2686106..2687098) 1 NC_015731.1 PFAM: Protein of unknown function DUF897; KEGG: nit:NAL212_2283 hypothetical protein; hypothetical protein 2687098 10934621 Nit79A3_2516 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695685.1 2686106 R 261292 CDS YP_004695686.1 339483900 10934622 complement(2687126..2687263) 1 NC_015731.1 hypothetical protein 2687263 10934622 Nit79A3_2517 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695686.1 2687126 R 261292 CDS YP_004695687.1 339483901 10934623 2687705..2689165 1 NC_015731.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-3; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: nit:NAL212_2281 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAS/PAC sensor signal transduction histidine kinase 2689165 10934623 Nit79A3_2518 Nitrosomonas sp. Is79A3 PAS/PAC sensor signal transduction histidine kinase YP_004695687.1 2687705 D 261292 CDS YP_004695688.1 339483902 10934624 2689162..2689779 1 NC_015731.1 KEGG: nit:NAL212_2280 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 2689779 10934624 Nit79A3_2519 Nitrosomonas sp. Is79A3 LuxR family transcriptional regulator YP_004695688.1 2689162 D 261292 CDS YP_004695689.1 339483903 10934625 2689967..2690671 1 NC_015731.1 PFAM: Major intrinsic protein; KEGG: nit:NAL212_1624 major intrinsic protein; major intrinsic protein 2690671 10934625 Nit79A3_2520 Nitrosomonas sp. Is79A3 major intrinsic protein YP_004695689.1 2689967 D 261292 CDS YP_004695690.1 339483904 10934626 complement(2690805..2694590) 1 NC_015731.1 TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated region; DNA/RNA helicase, C-terminal; Domain of unknown function DUF1605; KEGG: nit:NAL212_2554 ATP-dependent helicase HrpA; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; ATP-dependent helicase HrpA 2694590 10934626 Nit79A3_2521 Nitrosomonas sp. Is79A3 ATP-dependent helicase HrpA YP_004695690.1 2690805 R 261292 CDS YP_004695691.1 339483905 10934627 complement(2694764..2695981) 1 NC_015731.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; KEGG: nhl:Nhal_1988 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 2695981 10934627 Nit79A3_2522 Nitrosomonas sp. Is79A3 transposase IS116/IS110/IS902 family protein YP_004695691.1 2694764 R 261292 CDS YP_004695692.1 339483906 10934629 2696574..2697449 1 NC_015731.1 manually curated; KEGG: pph:Ppha_2823 hypothetical protein; hypothetical protein 2697449 10934629 Nit79A3_2524 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695692.1 2696574 D 261292 CDS YP_004695693.1 339483907 10934630 2697512..2698360 1 NC_015731.1 KEGG: nhl:Nhal_0251 protein of unknown function DUF1568; hypothetical protein 2698360 10934630 Nit79A3_2525 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695693.1 2697512 D 261292 CDS YP_004695694.1 339483908 10934631 2698670..2700853 1 NC_015731.1 KEGG: swd:Swoo_3928 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03549; YcaO-like; PFAM: YcaO-like; Peroxiredoxin, OsmC-like protein; hypothetical protein 2700853 10934631 Nit79A3_2526 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695694.1 2698670 D 261292 CDS YP_004695695.1 339483909 10934633 complement(2701368..2702369) 1 NC_015731.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nit:NAL212_2027 transcriptional regulator, LysR family; LysR family transcriptional regulator 2702369 10934633 Nit79A3_2528 Nitrosomonas sp. Is79A3 LysR family transcriptional regulator YP_004695695.1 2701368 R 261292 CDS YP_004695696.1 339483910 10934634 2702503..2703372 1 NC_015731.1 PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: nit:NAL212_2026 pirin domain-containing protein; pirin 2703372 10934634 Nit79A3_2529 Nitrosomonas sp. Is79A3 pirin YP_004695696.1 2702503 D 261292 CDS YP_004695697.1 339483911 10934635 2703397..2703777 1 NC_015731.1 PFAM: DoxX; KEGG: neu:NE1546 hypothetical protein; DoxX family protein 2703777 10934635 Nit79A3_2530 Nitrosomonas sp. Is79A3 DoxX family protein YP_004695697.1 2703397 D 261292 CDS YP_004695698.1 339483912 10934636 2704086..2704475 1 NC_015731.1 KEGG: nit:NAL212_2002 succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, cytochrome b556 subunit 2704475 10934636 Nit79A3_2531 Nitrosomonas sp. Is79A3 succinate dehydrogenase, cytochrome b556 subunit YP_004695698.1 2704086 D 261292 CDS YP_004695699.1 339483913 10934637 2704469..2704822 1 NC_015731.1 KEGG: nmu:Nmul_A0862 succinate dehydrogenase, cytochrome b subunit; TIGRFAM: Succinate dehydrogenase, hydrophobic membrane anchor; PFAM: Succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, hydrophobic membrane anchor protein 2704822 10934637 Nit79A3_2532 Nitrosomonas sp. Is79A3 succinate dehydrogenase, hydrophobic membrane anchor protein YP_004695699.1 2704469 D 261292 CDS YP_004695700.1 339483914 10934638 2704824..2706587 1 NC_015731.1 KEGG: nit:NAL212_2000 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; succinate dehydrogenase, flavoprotein subunit 2706587 10934638 Nit79A3_2533 Nitrosomonas sp. Is79A3 succinate dehydrogenase, flavoprotein subunit YP_004695700.1 2704824 D 261292 CDS YP_004695701.1 339483915 10934639 complement(2706652..2707692) 1 NC_015731.1 KEGG: sme:SM_b20914 hypothetical protein; hypothetical protein 2707692 10934639 Nit79A3_2534 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695701.1 2706652 R 261292 CDS YP_004695702.1 339483916 10934640 2707863..2708732 1 NC_015731.1 PFAM: UspA; KEGG: bav:BAV3184 universal stress protein; UspA domain-containing protein 2708732 10934640 Nit79A3_2535 Nitrosomonas sp. Is79A3 UspA domain-containing protein YP_004695702.1 2707863 D 261292 CDS YP_004695703.1 339483917 10934641 complement(2708764..2711478) 1 NC_015731.1 KEGG: hch:HCH_06855 cation transport ATPase; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; P-type HAD superfamily ATPase 2711478 10934641 Nit79A3_2536 Nitrosomonas sp. Is79A3 P-type HAD superfamily ATPase YP_004695703.1 2708764 R 261292 CDS YP_004695704.1 339483918 10934642 complement(2711558..2711992) 1 NC_015731.1 PFAM: UspA; KEGG: app:CAP2UW1_3847 UspA domain-containing protein; UspA domain-containing protein 2711992 10934642 Nit79A3_2537 Nitrosomonas sp. Is79A3 UspA domain-containing protein YP_004695704.1 2711558 R 261292 CDS YP_004695705.1 339483919 10934643 2712299..2713117 1 NC_015731.1 KEGG: tsa:AciPR4_2812 hypothetical protein; hypothetical protein 2713117 10934643 Nit79A3_2538 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695705.1 2712299 D 261292 CDS YP_004695706.1 339483920 10934644 complement(2713344..2713778) 1 NC_015731.1 PFAM: UspA; KEGG: app:CAP2UW1_0552 UspA domain-containing protein; UspA domain-containing protein 2713778 10934644 Nit79A3_2539 Nitrosomonas sp. Is79A3 UspA domain-containing protein YP_004695706.1 2713344 R 261292 CDS YP_004695707.1 339483921 10934646 complement(2714192..2715028) 1 NC_015731.1 KEGG: nit:NAL212_2578 nuclease (SNase domain-containing protein); PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like); nuclease 2715028 10934646 Nit79A3_2541 Nitrosomonas sp. Is79A3 nuclease YP_004695707.1 2714192 R 261292 CDS YP_004695708.1 339483922 10934647 2715339..2716790 1 NC_015731.1 KEGG: cpb:Cphamn1_2069 amino acid carrier protein; TIGRFAM: Sodium:alanine symporter; PFAM: Sodium:alanine symporter; amino acid carrier protein 2716790 10934647 Nit79A3_2542 Nitrosomonas sp. Is79A3 amino acid carrier protein YP_004695708.1 2715339 D 261292 CDS YP_004695709.1 339483923 10934648 2716906..2717718 1 NC_015731.1 KEGG: nit:NAL212_2577 sulfate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 2717718 10934648 Nit79A3_2543 Nitrosomonas sp. Is79A3 ABC transporter YP_004695709.1 2716906 D 261292 CDS YP_004695710.1 339483924 10934649 2717711..2718508 1 NC_015731.1 KEGG: nit:NAL212_2576 hypothetical protein; TIGRFAM: Protein of unknown function DUF140; PFAM: Protein of unknown function DUF140; hypothetical protein 2718508 10934649 Nit79A3_2544 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695710.1 2717711 D 261292 CDS YP_004695711.1 339483925 10934650 2718508..2718975 1 NC_015731.1 PFAM: Mammalian cell entry related; KEGG: nit:NAL212_2575 mammalian cell entry related domain-containing protein; Mammalian cell entry related domain-containing protein 2718975 10934650 Nit79A3_2545 Nitrosomonas sp. Is79A3 Mammalian cell entry related domain-containing protein YP_004695711.1 2718508 D 261292 CDS YP_004695712.1 339483926 10934651 2719050..2719670 1 NC_015731.1 PFAM: Toluene tolerance; KEGG: nit:NAL212_2574 toluene tolerance family protein; toluene tolerance family protein 2719670 10934651 Nit79A3_2546 Nitrosomonas sp. Is79A3 toluene tolerance family protein YP_004695712.1 2719050 D 261292 CDS YP_004695713.1 339483927 10934652 2719680..2720018 1 NC_015731.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: nit:NAL212_2573 sulfate transporter/antisigma-factor antagonist STAS; Sulfate transporter/antisigma-factor antagonist STAS 2720018 10934652 Nit79A3_2547 Nitrosomonas sp. Is79A3 Sulfate transporter/antisigma-factor antagonist STAS YP_004695713.1 2719680 D 261292 CDS YP_004695714.1 339483928 10934653 2720081..2720998 1 NC_015731.1 KEGG: nit:NAL212_2572 sulfate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 2720998 10934653 Nit79A3_2548 Nitrosomonas sp. Is79A3 ABC transporter YP_004695714.1 2720081 D 261292 CDS YP_004695715.1 339483929 10934654 2720995..2721750 1 NC_015731.1 PFAM: ABC-2 type transporter; KEGG: nit:NAL212_2571 ABC-2 type transporter; ABC transporter 2721750 10934654 Nit79A3_2549 Nitrosomonas sp. Is79A3 ABC transporter YP_004695715.1 2720995 D 261292 CDS YP_004695716.1 339483930 10934655 2721814..2722056 1 NC_015731.1 PFAM: BolA-like protein; KEGG: nit:NAL212_2570 BolA family protein; BolA family protein 2722056 10934655 Nit79A3_2550 Nitrosomonas sp. Is79A3 BolA family protein YP_004695716.1 2721814 D 261292 CDS YP_004695717.1 339483931 10934656 2722167..2722955 1 NC_015731.1 KEGG: nit:NAL212_2569 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; molecular chaperone DnaJ 2722955 10934656 Nit79A3_2551 Nitrosomonas sp. Is79A3 molecular chaperone DnaJ YP_004695717.1 2722167 D 261292 CDS YP_004695718.1 339483932 10934657 2723102..2723710 1 NC_015731.1 PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: nit:NAL212_2568 glutathione S-transferase domain; Glutathione S-transferase domain-containing protein 2723710 10934657 Nit79A3_2552 Nitrosomonas sp. Is79A3 Glutathione S-transferase domain-containing protein YP_004695718.1 2723102 D 261292 CDS YP_004695719.1 339483933 10934658 complement(2723772..2724308) 1 NC_015731.1 KEGG: psl:Psta_2573 hypothetical protein; hypothetical protein 2724308 10934658 Nit79A3_2553 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695719.1 2723772 R 261292 CDS YP_004695720.1 339483934 10934659 complement(2724765..2725928) 1 NC_015731.1 KEGG: nde:NIDE1370 hypothetical protein; hypothetical protein 2725928 10934659 Nit79A3_2554 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695720.1 2724765 R 261292 CDS YP_004695721.1 339483935 10934660 complement(2726356..2727573) 1 NC_015731.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; KEGG: nhl:Nhal_1988 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 2727573 10934660 Nit79A3_2555 Nitrosomonas sp. Is79A3 transposase IS116/IS110/IS902 family protein YP_004695721.1 2726356 R 261292 CDS YP_004695722.1 339483936 10934661 complement(2728006..2728893) 1 NC_015731.1 PFAM: SEC-C motif; KEGG: hypothetical protein; SEC-C motif domain-containing protein 2728893 10934661 Nit79A3_2556 Nitrosomonas sp. Is79A3 SEC-C motif domain-containing protein YP_004695722.1 2728006 R 261292 CDS YP_004695723.1 339483937 10934662 2729163..2730380 1 NC_015731.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; KEGG: nhl:Nhal_1988 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 2730380 10934662 Nit79A3_2557 Nitrosomonas sp. Is79A3 transposase IS116/IS110/IS902 family protein YP_004695723.1 2729163 D 261292 CDS YP_004695724.1 339483938 10934663 complement(2730502..2732535) 1 NC_015731.1 PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; KEGG: nit:NAL212_0946 peptidase M1 membrane alanine aminopeptidase; peptidase M1 membrane alanine aminopeptidase 2732535 10934663 Nit79A3_2558 Nitrosomonas sp. Is79A3 peptidase M1 membrane alanine aminopeptidase YP_004695724.1 2730502 R 261292 CDS YP_004695725.1 339483939 10934664 complement(2732554..2733783) 1 NC_015731.1 KEGG: nit:NAL212_0945 hypothetical protein; PFAM: Protein of unknown function DUF399; SMART: PDZ/DHR/GLGF; hypothetical protein 2733783 10934664 Nit79A3_2559 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695725.1 2732554 R 261292 CDS YP_004695726.1 339483940 10934665 complement(2733900..2737910) 1 NC_015731.1 TIGRFAM: Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria; HAMAP: Phosphoribosylformylglycinamidine synthase; KEGG: nit:NAL212_0944 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; Phosphoribosylformylglycinamidine synthase 2737910 10934665 Nit79A3_2560 Nitrosomonas sp. Is79A3 Phosphoribosylformylglycinamidine synthase YP_004695726.1 2733900 R 261292 CDS YP_004695727.1 339483941 10934666 2737996..2739513 1 NC_015731.1 KEGG: nit:NAL212_0943 YjeF-like protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; PFAM: YjeF-related protein, N-terminal; Uncharacterised protein family, carbohydrate kinase-related; hypothetical protein 2739513 10934666 Nit79A3_2561 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695727.1 2737996 D 261292 CDS YP_004695728.1 339483942 10934667 complement(2739564..2740457) 1 NC_015731.1 PFAM: ROK; KEGG: dar:Daro_0037 N-acetylglucosamine kinase; ROK family protein 2740457 10934667 Nit79A3_2562 Nitrosomonas sp. Is79A3 ROK family protein YP_004695728.1 2739564 R 261292 CDS YP_004695729.1 339483943 10934668 complement(2740683..2741366) 1 NC_015731.1 KEGG: nmu:Nmul_A2026 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 2741366 10934668 Nit79A3_2563 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004695729.1 2740683 R 261292 CDS YP_004695730.1 339483944 10934669 complement(2741939..2742568) 1 NC_015731.1 KEGG: tbd:Tbd_1584 hypothetical protein; hypothetical protein 2742568 10934669 Nit79A3_2564 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695730.1 2741939 R 261292 CDS YP_004695731.1 339483945 10934670 complement(2742565..2743662) 1 NC_015731.1 PFAM: Radical SAM; KEGG: nit:NAL212_1536 radical SAM domain-containing protein; Radical SAM domain-containing protein 2743662 10934670 Nit79A3_2565 Nitrosomonas sp. Is79A3 Radical SAM domain-containing protein YP_004695731.1 2742565 R 261292 CDS YP_004695732.1 339483946 10934671 complement(2743655..2744248) 1 NC_015731.1 KEGG: nit:NAL212_1535 AMMECR1 domain-containing protein; TIGRFAM: AMMECR1; PFAM: AMMECR1; AMMECR1 domain-containing protein 2744248 10934671 Nit79A3_2566 Nitrosomonas sp. Is79A3 AMMECR1 domain-containing protein YP_004695732.1 2743655 R 261292 CDS YP_004695733.1 339483947 10934672 complement(2744263..2745045) 1 NC_015731.1 PFAM: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related; KEGG: nit:NAL212_1534 hypothetical protein; hypothetical protein 2745045 10934672 Nit79A3_2567 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695733.1 2744263 R 261292 CDS YP_004695734.1 339483948 10934673 complement(2745158..2745895) 1 NC_015731.1 KEGG: sat:SYN_02040 cytoplasmic protein; cytoplasmic protein 2745895 10934673 Nit79A3_2568 Nitrosomonas sp. Is79A3 cytoplasmic protein YP_004695734.1 2745158 R 261292 CDS YP_004695735.1 339483949 10934674 complement(2745944..2747131) 1 NC_015731.1 KEGG: nit:NAL212_1533 lipase class 3; lipase class 3 2747131 10934674 Nit79A3_2569 Nitrosomonas sp. Is79A3 lipase class 3 YP_004695735.1 2745944 R 261292 CDS YP_004695736.1 339483950 10934675 2747776..2748315 1 NC_015731.1 KEGG: meh:M301_2279 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 2748315 10934675 Nit79A3_2570 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004695736.1 2747776 D 261292 CDS YP_004695737.1 339483951 10934676 complement(2748519..2749433) 1 NC_015731.1 PFAM: ApbE-like lipoprotein; KEGG: nit:NAL212_1532 ApbE family lipoprotein; ApbE family lipoprotein 2749433 10934676 Nit79A3_2571 Nitrosomonas sp. Is79A3 ApbE family lipoprotein YP_004695737.1 2748519 R 261292 CDS YP_004695738.1 339483952 10934677 complement(2749498..2752197) 1 NC_015731.1 KEGG: nit:NAL212_1531 hypothetical protein; hypothetical protein 2752197 10934677 Nit79A3_2572 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695738.1 2749498 R 261292 CDS YP_004695739.1 339483953 10934678 complement(2752255..2752509) 1 NC_015731.1 KEGG: nit:NAL212_1530 arginine decarboxylase; arginine decarboxylase 2752509 10934678 Nit79A3_2573 Nitrosomonas sp. Is79A3 arginine decarboxylase YP_004695739.1 2752255 R 261292 CDS YP_004695740.1 339483954 10934679 complement(2752512..2753018) 1 NC_015731.1 PFAM: Redoxin; KEGG: nit:NAL212_0020 redoxin domain-containing protein; Redoxin domain-containing protein 2753018 10934679 Nit79A3_2574 Nitrosomonas sp. Is79A3 Redoxin domain-containing protein YP_004695740.1 2752512 R 261292 CDS YP_004695741.1 339483955 10934680 complement(2753075..2753533) 1 NC_015731.1 KEGG: nit:NAL212_1528 hypothetical protein; hypothetical protein 2753533 10934680 Nit79A3_2575 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695741.1 2753075 R 261292 CDS YP_004695742.1 339483956 10934681 complement(2753677..2754453) 1 NC_015731.1 KEGG: nit:NAL212_1527 hypothetical protein; hypothetical protein 2754453 10934681 Nit79A3_2576 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695742.1 2753677 R 261292 CDS YP_004695743.1 339483957 10934682 complement(2754593..2755327) 1 NC_015731.1 KEGG: nit:NAL212_1527 hypothetical protein; hypothetical protein 2755327 10934682 Nit79A3_2577 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695743.1 2754593 R 261292 CDS YP_004695744.1 339483958 10934683 2755819..2757372 1 NC_015731.1 KEGG: nit:NAL212_1814 hypothetical protein; hypothetical protein 2757372 10934683 Nit79A3_2578 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695744.1 2755819 D 261292 CDS YP_004695745.1 339483959 10934684 complement(2757390..2759066) 1 NC_015731.1 KEGG: nit:NAL212_1816 DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC protein, N-terminal; DNA repair protein RecN 2759066 10934684 Nit79A3_2579 Nitrosomonas sp. Is79A3 DNA repair protein RecN YP_004695745.1 2757390 R 261292 CDS YP_004695746.1 339483960 10934685 complement(2759089..2759961) 1 NC_015731.1 KEGG: nit:NAL212_1817 ATP-NAD/AcoX kinase; HAMAP: inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD/AcoX kinase; inorganic polyphosphate/ATP-NAD kinase 2759961 10934685 Nit79A3_2580 Nitrosomonas sp. Is79A3 inorganic polyphosphate/ATP-NAD kinase YP_004695746.1 2759089 R 261292 CDS YP_004695747.1 339483961 10934686 2760262..2761281 1 NC_015731.1 TIGRFAM: Negative regulator of class I heat shock protein; HAMAP: Negative regulator of class I heat shock protein; KEGG: nit:NAL212_1818 heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; heat-inducible transcription repressor HrcA 2761281 10934686 Nit79A3_2581 Nitrosomonas sp. Is79A3 heat-inducible transcription repressor HrcA YP_004695747.1 2760262 D 261292 CDS YP_004695748.1 339483962 10934687 2761380..2762465 1 NC_015731.1 TIGRFAM: Ferrochelatase; HAMAP: Ferrochelatase; KEGG: nit:NAL212_1819 ferrochelatase; PFAM: Ferrochelatase; ferrochelatase 2762465 10934687 Nit79A3_2582 Nitrosomonas sp. Is79A3 ferrochelatase YP_004695748.1 2761380 D 261292 CDS YP_004695749.1 339483963 10934688 complement(2762513..2762857) 1 NC_015731.1 KEGG: nit:NAL212_1820 hypothetical protein; hypothetical protein 2762857 10934688 Nit79A3_2583 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695749.1 2762513 R 261292 CDS YP_004695750.1 339483964 10934689 2763248..2763562 1 NC_015731.1 KEGG: nit:NAL212_1245 hypothetical protein; hypothetical protein 2763562 10934689 Nit79A3_2584 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695750.1 2763248 D 261292 CDS YP_004695751.1 339483965 10934690 2763643..2763936 1 NC_015731.1 PFAM: Peptidase M4, propeptide, PepSY; KEGG: nit:NAL212_1246 peptidase; Propeptide PepSY amd peptidase M4 2763936 10934690 Nit79A3_2585 Nitrosomonas sp. Is79A3 Propeptide PepSY amd peptidase M4 YP_004695751.1 2763643 D 261292 CDS YP_004695752.1 339483966 10934691 2763973..2764659 1 NC_015731.1 KEGG: nit:NAL212_1247 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; winged helix family two component transcriptional regulator 2764659 10934691 Nit79A3_2586 Nitrosomonas sp. Is79A3 winged helix family two component transcriptional regulator YP_004695752.1 2763973 D 261292 CDS YP_004695753.1 339483967 10934692 2764656..2765990 1 NC_015731.1 KEGG: nit:NAL212_1248 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 2765990 10934692 Nit79A3_2587 Nitrosomonas sp. Is79A3 integral membrane sensor signal transduction histidine kinase YP_004695753.1 2764656 D 261292 CDS YP_004695754.1 339483968 10934693 complement(2766009..2766281) 1 NC_015731.1 PFAM: Uncharacterised protein family UPF0016; KEGG: nit:NAL212_1251 hypothetical protein; hypothetical protein 2766281 10934693 Nit79A3_2588 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695754.1 2766009 R 261292 CDS YP_004695755.1 339483969 10934694 complement(2766533..2769316) 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; PAS fold; PAS fold-4; KEGG: slt:Slit_0879 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAC motif; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2769316 10934694 Nit79A3_2589 Nitrosomonas sp. Is79A3 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004695755.1 2766533 R 261292 CDS YP_004695756.1 339483970 10934695 complement(2769562..2772387) 1 NC_015731.1 KEGG: ddf:DEFDS_0291 hypothetical protein; hypothetical protein 2772387 10934695 Nit79A3_2590 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695756.1 2769562 R 261292 CDS YP_004695757.1 339483971 10934696 complement(2772380..2773318) 1 NC_015731.1 KEGG: bal:BACI_pCIXO100200 hypothetical protein; hypothetical protein 2773318 10934696 Nit79A3_2591 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695757.1 2772380 R 261292 CDS YP_004695758.1 339483972 10934697 complement(2773315..2773779) 1 NC_015731.1 KEGG: nhl:Nhal_3964 N-6 DNA methylase; N-6 DNA methylase 2773779 10934697 Nit79A3_2592 Nitrosomonas sp. Is79A3 N-6 DNA methylase YP_004695758.1 2773315 R 261292 CDS YP_004695759.1 339483973 10934698 2774331..2775554 1 NC_015731.1 PFAM: Integrase, catalytic core, phage; KEGG: bxe:Bxe_A2541 CP4-like integrase; integrase 2775554 10934698 Nit79A3_2593 Nitrosomonas sp. Is79A3 integrase YP_004695759.1 2774331 D 261292 CDS YP_004695760.1 339483974 10934699 2776172..2776429 1 NC_015731.1 KEGG: har:HEAR3024 DNA-binding; repressor; transcription; transcription regulation; hypothetical protein 2776429 10934699 Nit79A3_2594 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695760.1 2776172 D 261292 CDS YP_004695761.1 339483975 10934700 2776769..2777713 1 NC_015731.1 hypothetical protein 2777713 10934700 Nit79A3_2595 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695761.1 2776769 D 261292 CDS YP_004695762.1 339483976 10934701 2777847..2778095 1 NC_015731.1 PFAM: Prophage CP4-57 regulatory; KEGG: nmu:Nmul_A2182 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA 2778095 10934701 Nit79A3_2596 Nitrosomonas sp. Is79A3 phage transcriptional regulator AlpA YP_004695762.1 2777847 D 261292 CDS YP_004695763.1 339483977 10934702 2778092..2778466 1 NC_015731.1 hypothetical protein 2778466 10934702 Nit79A3_2597 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695763.1 2778092 D 261292 CDS YP_004695764.1 339483978 10934703 2778727..2779329 1 NC_015731.1 KEGG: rpi:Rpic_2741 hypothetical protein; hypothetical protein 2779329 10934703 Nit79A3_2598 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695764.1 2778727 D 261292 CDS YP_004695765.1 339483979 10934704 2779307..2782162 1 NC_015731.1 PFAM: Protein of unknown function DUF927; KEGG: pfl:PFL_4979 hypothetical protein; hypothetical protein 2782162 10934704 Nit79A3_2599 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695765.1 2779307 D 261292 CDS YP_004695766.1 339483980 10934705 2782125..2782796 1 NC_015731.1 hypothetical protein 2782796 10934705 Nit79A3_2600 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695766.1 2782125 D 261292 CDS YP_004695767.1 339483981 10934707 2783221..2785464 1 NC_015731.1 TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria; PFAM: Ribonuclease II/R; Ribonuclease B, OB region N-terminal; Ribosomal protein S1, RNA binding domain; KEGG: nit:NAL212_1357 ribonuclease R; SMART: Cold shock protein; ribonuclease R 2785464 10934707 Nit79A3_2601 Nitrosomonas sp. Is79A3 ribonuclease R YP_004695767.1 2783221 D 261292 CDS YP_004695768.1 339483982 10934708 2785616..2786356 1 NC_015731.1 KEGG: nit:NAL212_1356 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; TrmH family RNA methyltransferase 2786356 10934708 Nit79A3_2602 Nitrosomonas sp. Is79A3 TrmH family RNA methyltransferase YP_004695768.1 2785616 D 261292 CDS YP_004695769.1 339483983 10934709 2786461..2788218 1 NC_015731.1 TIGRFAM: Arginyl-tRNA synthetase, class Ic; HAMAP: Arginyl-tRNA synthetase, class Ic; KEGG: nit:NAL212_1355 arginyl-tRNA synthetase; arginyl-tRNA synthetase 2788218 10934709 Nit79A3_2603 Nitrosomonas sp. Is79A3 arginyl-tRNA synthetase YP_004695769.1 2786461 D 261292 CDS YP_004695770.1 339483984 10934710 2788243..2789031 1 NC_015731.1 PFAM: Sporulation/cell division region, bacteria; KEGG: nit:NAL212_1354 sporulation domain-containing protein; Sporulation domain-containing protein 2789031 10934710 Nit79A3_2604 Nitrosomonas sp. Is79A3 Sporulation domain-containing protein YP_004695770.1 2788243 D 261292 CDS YP_004695771.1 339483985 10934711 2789130..2789768 1 NC_015731.1 PFAM: DSBA oxidoreductase; KEGG: nit:NAL212_1353 DsbA oxidoreductase; DSBA oxidoreductase 2789768 10934711 Nit79A3_2605 Nitrosomonas sp. Is79A3 DSBA oxidoreductase YP_004695771.1 2789130 D 261292 CDS YP_004695772.1 339483986 10934712 2789843..2790307 1 NC_015731.1 TIGRFAM: Peptide methionine sulphoxide reductase MsrA; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: nit:NAL212_1352 peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA; peptide methionine sulfoxide reductase 2790307 10934712 Nit79A3_2606 Nitrosomonas sp. Is79A3 peptide methionine sulfoxide reductase YP_004695772.1 2789843 D 261292 CDS YP_004695773.1 339483987 10934713 2790457..2792070 1 NC_015731.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: nit:NAL212_1351 signal transduction protein; signal transduction protein 2792070 10934713 Nit79A3_2607 Nitrosomonas sp. Is79A3 signal transduction protein YP_004695773.1 2790457 D 261292 CDS YP_004695774.1 339483988 10934714 2792111..2792728 1 NC_015731.1 SMART: Guanylate kinase/L-type calcium channel region; TIGRFAM: Guanylate kinase, sub-group; KEGG: nit:NAL212_1350 guanylate kinase; HAMAP: Guanylate kinase, sub-group; PFAM: Guanylate kinase; guanylate kinase 2792728 10934714 Nit79A3_2608 Nitrosomonas sp. Is79A3 guanylate kinase YP_004695774.1 2792111 D 261292 CDS YP_004695775.1 339483989 10934715 2792814..2793020 1 NC_015731.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; HAMAP: DNA-directed RNA polymerase, omega subunit; KEGG: nit:NAL212_1349 DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; DNA-directed RNA polymerase subunit omega 2793020 10934715 Nit79A3_2609 Nitrosomonas sp. Is79A3 DNA-directed RNA polymerase subunit omega YP_004695775.1 2792814 D 261292 CDS YP_004695776.1 339483990 10934716 2793254..2795359 1 NC_015731.1 TIGRFAM: RelA/SpoT protein; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD region, subdomain; TGS; Amino acid-binding ACT; KEGG: nit:NAL212_1348 (p)ppGpp synthetase I, SpoT/RelA; SMART: Metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA 2795359 10934716 Nit79A3_2610 Nitrosomonas sp. Is79A3 (p)ppGpp synthetase I SpoT/RelA YP_004695776.1 2793254 D 261292 CDS YP_004695777.1 339483991 10934717 complement(2795436..2796395) 1 NC_015731.1 PFAM: Cytochrome c assembly protein; KEGG: nit:NAL212_1457 cytochrome c assembly protein; cytochrome c assembly protein 2796395 10934717 Nit79A3_2611 Nitrosomonas sp. Is79A3 cytochrome c assembly protein YP_004695777.1 2795436 R 261292 CDS YP_004695778.1 339483992 10934718 2796417..2797766 1 NC_015731.1 TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; KEGG: nit:NAL212_1456 signal recognition particle protein; SMART: ATPase, AAA+ type, core; signal recognition particle protein 2797766 10934718 Nit79A3_2612 Nitrosomonas sp. Is79A3 signal recognition particle protein YP_004695778.1 2796417 D 261292 CDS YP_004695779.1 339483993 10934719 complement(2797985..2798434) 1 NC_015731.1 TIGRFAM: DeoxyUTP pyrophosphatase domain, subfamily 1,; HAMAP: Deoxyuridine 5'-triphosphate nucleotidohydrolase; KEGG: nit:NAL212_1454 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: DeoxyUTP pyrophosphatase domain; Deoxyuridine 5'-triphosphate nucleotidohydrolase 2798434 10934719 Nit79A3_2613 Nitrosomonas sp. Is79A3 Deoxyuridine 5'-triphosphate nucleotidohydrolase YP_004695779.1 2797985 R 261292 CDS YP_004695780.1 339483994 10934720 complement(2798460..2799662) 1 NC_015731.1 KEGG: nit:NAL212_1453 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 2799662 10934720 Nit79A3_2614 Nitrosomonas sp. Is79A3 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase YP_004695780.1 2798460 R 261292 CDS YP_004695781.1 339483995 10934721 2799887..2800561 1 NC_015731.1 KEGG: nit:NAL212_1452 DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like; PFAM: DNA repair, RadC-like; DNA repair protein RadC 2800561 10934721 Nit79A3_2615 Nitrosomonas sp. Is79A3 DNA repair protein RadC YP_004695781.1 2799887 D 261292 CDS YP_004695782.1 339483996 10934722 2800728..2800964 1 NC_015731.1 TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: nit:NAL212_1451 50S ribosomal protein L28; PFAM: Ribosomal protein L28; 50S ribosomal protein L28 2800964 10934722 Nit79A3_2616 Nitrosomonas sp. Is79A3 50S ribosomal protein L28 YP_004695782.1 2800728 D 261292 CDS YP_004695783.1 339483997 10934723 2800999..2801154 1 NC_015731.1 TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: net:Neut_0780 50S ribosomal protein L33; PFAM: Ribosomal protein L33; 50S ribosomal protein L33 2801154 10934723 Nit79A3_2617 Nitrosomonas sp. Is79A3 50S ribosomal protein L33 YP_004695783.1 2800999 D 261292 CDS YP_004695784.1 339483998 10934724 complement(2801239..2802429) 1 NC_015731.1 PFAM: Fatty acid desaturase, type 1; KEGG: nit:NAL212_1449 fatty acid desaturase; fatty acid desaturase 2802429 10934724 Nit79A3_2618 Nitrosomonas sp. Is79A3 fatty acid desaturase YP_004695784.1 2801239 R 261292 CDS YP_004695785.1 339483999 10934725 complement(2802724..2803281) 1 NC_015731.1 KEGG: nit:NAL212_1448 pseudouridine synthase Rsu; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; pseudouridine synthase 2803281 10934725 Nit79A3_2619 Nitrosomonas sp. Is79A3 pseudouridine synthase YP_004695785.1 2802724 R 261292 CDS YP_004695786.1 339484000 10934726 complement(2803321..2803773) 1 NC_015731.1 PFAM: Phosphoglycerate mutase; KEGG: nit:NAL212_1447 phosphohistidine phosphatase, SixA; phosphohistidine phosphatase, SixA 2803773 10934726 Nit79A3_2620 Nitrosomonas sp. Is79A3 phosphohistidine phosphatase, SixA YP_004695786.1 2803321 R 261292 CDS YP_004695787.1 339484001 10934727 complement(2803806..2804102) 1 NC_015731.1 TIGRFAM: Conserved hypothetical protein CHP00251; HAMAP: Protein of unknown function DUF167; KEGG: nit:NAL212_1446 hypothetical protein; PFAM: Protein of unknown function DUF167; hypothetical protein 2804102 10934727 Nit79A3_2621 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695787.1 2803806 R 261292 CDS YP_004695788.1 339484002 10934728 complement(2804118..2804693) 1 NC_015731.1 PFAM: Protein of unknown function YGGT; KEGG: nit:NAL212_1445 hypothetical protein; hypothetical protein 2804693 10934728 Nit79A3_2622 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695788.1 2804118 R 261292 CDS YP_004695789.1 339484003 10934729 complement(2804756..2805568) 1 NC_015731.1 KEGG: nit:NAL212_1444 pyrroline-5-carboxylate reductase; TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; pyrroline-5-carboxylate reductase 2805568 10934729 Nit79A3_2623 Nitrosomonas sp. Is79A3 pyrroline-5-carboxylate reductase YP_004695789.1 2804756 R 261292 CDS YP_004695790.1 339484004 10934730 complement(2805682..2806512) 1 NC_015731.1 TIGRFAM: DNA glycosylase/AP lyase; HAMAP: Formamidopyrimidine-DNA glycosylase; KEGG: nit:NAL212_1443 formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase 2806512 10934730 Nit79A3_2624 Nitrosomonas sp. Is79A3 Formamidopyrimidine-DNA glycosylase YP_004695790.1 2805682 R 261292 CDS YP_004695791.1 339484005 10934731 complement(2806512..2807384) 1 NC_015731.1 manually curated; KEGG: nit:NAL212_1442 hypothetical protein; hypothetical protein 2807384 10934731 Nit79A3_2625 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695791.1 2806512 R 261292 CDS YP_004695792.1 339484006 10934732 complement(2807387..2808745) 1 NC_015731.1 PFAM: ABC-type uncharacterised transport system; KEGG: nit:NAL212_1441 ABC transporter; ABC transporter 2808745 10934732 Nit79A3_2626 Nitrosomonas sp. Is79A3 ABC transporter YP_004695792.1 2807387 R 261292 CDS YP_004695793.1 339484007 10934733 complement(2808763..2809506) 1 NC_015731.1 KEGG: nit:NAL212_1440 ABC-2 type transport system permease; ABC-2 type transport system permease 2809506 10934733 Nit79A3_2627 Nitrosomonas sp. Is79A3 ABC-2 type transport system permease YP_004695793.1 2808763 R 261292 CDS YP_004695794.1 339484008 10934734 complement(2809529..2810257) 1 NC_015731.1 KEGG: nit:NAL212_1439 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 2810257 10934734 Nit79A3_2628 Nitrosomonas sp. Is79A3 ABC transporter YP_004695794.1 2809529 R 261292 CDS YP_004695795.1 339484009 10934735 2810812..2811501 1 NC_015731.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: nit:NAL212_1438 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 2811501 10934735 Nit79A3_2629 Nitrosomonas sp. Is79A3 OmpA/MotB domain-containing protein YP_004695795.1 2810812 D 261292 CDS YP_004695796.1 339484010 10934736 2811579..2812910 1 NC_015731.1 KEGG: nit:NAL212_1437 S-adenosylhomocysteine deaminase; HAMAP: 5-methylthioadenosine/S-adenosylhomocysteine deaminase; PFAM: Amidohydrolase 1; 5-methylthioadenosine/S-adenosylhomocysteine deaminase 2812910 10934736 Nit79A3_2630 Nitrosomonas sp. Is79A3 5-methylthioadenosine/S-adenosylhomocysteine deaminase YP_004695796.1 2811579 D 261292 CDS YP_004695797.1 339484011 10934737 2812930..2813637 1 NC_015731.1 TIGRFAM: Ubiquinone biosynthesis O-methyltransferase; HAMAP: 3-demethylubiquinone-9 3-methyltransferase; KEGG: nit:NAL212_1436 ubiquinone biosynthesis O-methyltransferase; PFAM: Methyltransferase type 11; 3-demethylubiquinone-9 3-methyltransferase 2813637 10934737 Nit79A3_2631 Nitrosomonas sp. Is79A3 3-demethylubiquinone-9 3-methyltransferase YP_004695797.1 2812930 D 261292 CDS YP_004695798.1 339484012 10934738 2813800..2814447 1 NC_015731.1 KEGG: nit:NAL212_1435 phosphoglycolate phosphatase; TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; phosphoglycolate phosphatase 2814447 10934738 Nit79A3_2632 Nitrosomonas sp. Is79A3 phosphoglycolate phosphatase YP_004695798.1 2813800 D 261292 CDS YP_004695799.1 339484013 10934740 2815161..2816873 1 NC_015731.1 PFAM: Replication endonuclease, probable, phage; KEGG: nit:NAL212_1434 replication protein A; replication gene A 2816873 10934740 Nit79A3_2633 Nitrosomonas sp. Is79A3 replication gene A YP_004695799.1 2815161 D 261292 CDS YP_004695800.1 339484014 10934741 2816851..2817123 1 NC_015731.1 KEGG: nit:NAL212_1433 hypothetical protein; hypothetical protein 2817123 10934741 Nit79A3_2634 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695800.1 2816851 D 261292 CDS YP_004695801.1 339484015 10934742 2817201..2817614 1 NC_015731.1 KEGG: nit:NAL212_1432 hypothetical protein; hypothetical protein 2817614 10934742 Nit79A3_2635 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695801.1 2817201 D 261292 CDS YP_004695802.1 339484016 10934743 2817611..2817805 1 NC_015731.1 PFAM: HTH transcriptional regulator, MerR; KEGG: nit:NAL212_1431 hypothetical protein; regulatory protein MerR 2817805 10934743 Nit79A3_2636 Nitrosomonas sp. Is79A3 regulatory protein MerR YP_004695802.1 2817611 D 261292 CDS YP_004695803.1 339484017 10934744 2817781..2818866 1 NC_015731.1 PFAM: Integrase, catalytic core, phage; KEGG: nit:NAL212_1430 hypothetical protein; integrase 2818866 10934744 Nit79A3_2637 Nitrosomonas sp. Is79A3 integrase YP_004695803.1 2817781 D 261292 CDS YP_004695804.1 339484018 10934745 2818903..2819205 1 NC_015731.1 PFAM: Protein of unknown function DUF2136; KEGG: nit:NAL212_1429 hypothetical protein; hypothetical protein 2819205 10934745 Nit79A3_2638 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695804.1 2818903 D 261292 CDS YP_004695805.1 339484019 10934746 2819226..2819600 1 NC_015731.1 PFAM: Helix-turn-helix type 3; KEGG: neu:NE1587 helix-hairpin-helix DNA-binding motif-containing protein; XRE family transcriptional regulator 2819600 10934746 Nit79A3_2639 Nitrosomonas sp. Is79A3 XRE family transcriptional regulator YP_004695805.1 2819226 D 261292 CDS YP_004695806.1 339484020 10934747 2819887..2822346 1 NC_015731.1 KEGG: hypothetical protein; hypothetical protein 2822346 10934747 Nit79A3_2640 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695806.1 2819887 D 261292 CDS YP_004695807.1 339484021 10934748 2822712..2822870 1 NC_015731.1 hypothetical protein 2822870 10934748 Nit79A3_2641 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695807.1 2822712 D 261292 CDS YP_004695808.1 339484022 10934749 complement(2822943..2823191) 1 NC_015731.1 hypothetical protein 2823191 10934749 Nit79A3_2642 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695808.1 2822943 R 261292 CDS YP_004695809.1 339484023 10934750 complement(2823753..2824457) 1 NC_015731.1 PFAM: Glutaredoxin; KEGG: amr:AM1_3463 membrane associated glutaredoxin; glutaredoxin 2824457 10934750 Nit79A3_2643 Nitrosomonas sp. Is79A3 glutaredoxin YP_004695809.1 2823753 R 261292 CDS YP_004695810.1 339484024 10934751 complement(2824643..2826373) 1 NC_015731.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; KEGG: nit:NAL212_0932 pyruvate dehydrogenase (cytochrome); thiamine pyrophosphate TPP-binding domain-containing protein 2826373 10934751 Nit79A3_2644 Nitrosomonas sp. Is79A3 thiamine pyrophosphate TPP-binding domain-containing protein YP_004695810.1 2824643 R 261292 CDS YP_004695811.1 339484025 10934752 complement(2826984..2827142) 1 NC_015731.1 KEGG: gur:Gura_2402 hypothetical protein; hypothetical protein 2827142 10934752 Nit79A3_2645 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695811.1 2826984 R 261292 CDS YP_004695812.1 339484026 10934753 complement(2827207..2827413) 1 NC_015731.1 KEGG: bpy:Bphyt_0354 hypothetical protein; hypothetical protein 2827413 10934753 Nit79A3_2646 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695812.1 2827207 R 261292 CDS YP_004695813.1 339484027 10934754 2827659..2828009 1 NC_015731.1 PFAM: CsbD-like; KEGG: nmu:Nmul_A1602 CsbD-like; CsbD family protein 2828009 10934754 Nit79A3_2647 Nitrosomonas sp. Is79A3 CsbD family protein YP_004695813.1 2827659 D 261292 CDS YP_004695814.1 339484028 10934755 2828142..2828267 1 NC_015731.1 PFAM: Entericidin EcnAB; KEGG: nmu:Nmul_A1920 entericidin EcnAB; entericidin A/B 2828267 10934755 Nit79A3_2648 Nitrosomonas sp. Is79A3 entericidin A/B YP_004695814.1 2828142 D 261292 CDS YP_004695815.1 339484029 10934756 2828352..2828675 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: net:Neut_2500 transposase IS3/IS911; transposase IS3/IS911 family protein 2828675 10934756 Nit79A3_2649 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004695815.1 2828352 D 261292 CDS YP_004695816.1 339484030 10934757 2828672..2829580 1 NC_015731.1 KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 2829580 10934757 Nit79A3_2650 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004695816.1 2828672 D 261292 CDS YP_004695817.1 339484031 10934759 complement(2831569..2832477) 1 NC_015731.1 KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 2832477 10934759 Nit79A3_2653 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004695817.1 2831569 R 261292 CDS YP_004695818.1 339484032 10934760 complement(2832474..2832797) 1 NC_015731.1 KEGG: net:Neut_2500 transposase IS3/IS911; manually curated; PFAM: Transposase IS3/IS911; transposase IS3/IS911 family protein 2832797 10934760 Nit79A3_2654 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004695818.1 2832474 R 261292 CDS YP_004695819.1 339484033 10934761 2833646..2833855 1 NC_015731.1 KEGG: nit:NAL212_2601 transposase IS200-family protein; transposase IS200-family protein 2833855 10934761 Nit79A3_2655 Nitrosomonas sp. Is79A3 transposase IS200-family protein YP_004695819.1 2833646 D 261292 CDS YP_004695820.1 339484034 10934762 2833902..2834495 1 NC_015731.1 PFAM: Domain of unknown function DUF1994; KEGG: abo:ABO_2551 hypothetical protein; hypothetical protein 2834495 10934762 Nit79A3_2656 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695820.1 2833902 D 261292 CDS YP_004695821.1 339484035 10934763 2834711..2834986 1 NC_015731.1 PFAM: Excinuclease ABC, C subunit, N-terminal; KEGG: gpb:HDN1F_24460 predicted endonuclease containing URI domain; excinuclease ABC subunit C 2834986 10934763 Nit79A3_2657 Nitrosomonas sp. Is79A3 excinuclease ABC subunit C YP_004695821.1 2834711 D 261292 CDS YP_004695822.1 339484036 10934764 2835172..2835675 1 NC_015731.1 KEGG: nit:NAL212_2279 hypothetical protein; hypothetical protein 2835675 10934764 Nit79A3_2658 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695822.1 2835172 D 261292 CDS YP_004695823.1 339484037 10934765 2835690..2836241 1 NC_015731.1 KEGG: nit:NAL212_2278 hypothetical protein; hypothetical protein 2836241 10934765 Nit79A3_2659 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695823.1 2835690 D 261292 CDS YP_004695824.1 339484038 10934767 complement(2836484..2837425) 1 NC_015731.1 KEGG: nit:NAL212_0005 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter 2837425 10934767 Nit79A3_2661 Nitrosomonas sp. Is79A3 cation diffusion facilitator family transporter YP_004695824.1 2836484 R 261292 CDS YP_004695825.1 339484039 10934768 complement(2837614..2837823) 1 NC_015731.1 hypothetical protein 2837823 10934768 Nit79A3_2662 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695825.1 2837614 R 261292 CDS YP_004695826.1 339484040 10934769 complement(2838127..2838303) 1 NC_015731.1 hypothetical protein 2838303 10934769 Nit79A3_2663 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695826.1 2838127 R 261292 CDS YP_004695827.1 339484041 10934770 complement(2838386..2839204) 1 NC_015731.1 PFAM: Protein of unknown function DUF81; KEGG: nit:NAL212_2587 hypothetical protein; hypothetical protein 2839204 10934770 Nit79A3_2664 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695827.1 2838386 R 261292 CDS YP_004695828.1 339484042 10934771 complement(2839209..2840897) 1 NC_015731.1 KEGG: neu:NE2567 hypothetical protein; TIGRFAM: Beta-lactamase hydrolase-like; PFAM: Beta-lactamase hydrolase-like; Lycopene beta/epsilon cyclase; beta-lactamase hydrolase-family protein 2840897 10934771 Nit79A3_2665 Nitrosomonas sp. Is79A3 beta-lactamase hydrolase-family protein YP_004695828.1 2839209 R 261292 CDS YP_004695829.1 339484043 10934772 complement(2841003..2841410) 1 NC_015731.1 KEGG: neu:NE2568 ArsR family regulatory protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 2841410 10934772 Nit79A3_2666 Nitrosomonas sp. Is79A3 regulatory protein ArsR YP_004695829.1 2841003 R 261292 CDS YP_004695830.1 339484044 10934773 complement(2841475..2841915) 1 NC_015731.1 PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: nmu:Nmul_A1684 YeeE/YedE; hypothetical protein 2841915 10934773 Nit79A3_2667 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695830.1 2841475 R 261292 CDS YP_004695831.1 339484045 10934774 complement(2841941..2842372) 1 NC_015731.1 PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: net:Neut_2529 protein of unknown function DUF395, YeeE/YedE; hypothetical protein 2842372 10934774 Nit79A3_2668 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695831.1 2841941 R 261292 CDS YP_004695832.1 339484046 10934775 2842476..2843336 1 NC_015731.1 KEGG: neu:NE2571 metallo-beta-lactamase superfamily protein; metallo-beta-lactamase superfamily protein 2843336 10934775 Nit79A3_2669 Nitrosomonas sp. Is79A3 metallo-beta-lactamase superfamily protein YP_004695832.1 2842476 D 261292 CDS YP_004695833.1 339484047 10934776 2843477..2845933 1 NC_015731.1 KEGG: reu:Reut_A1185 ATPase, E1-E2 type; TIGRFAM: ATPase, P-type, plasma-membrane proton-efflux; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; plasma-membrane proton-efflux P-type ATPase 2845933 10934776 Nit79A3_2670 Nitrosomonas sp. Is79A3 plasma-membrane proton-efflux P-type ATPase YP_004695833.1 2843477 D 261292 CDS YP_004695834.1 339484048 10934778 complement(2846161..2846484) 1 NC_015731.1 KEGG: net:Neut_1719 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2846484 10934778 Nit79A3_2672 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004695834.1 2846161 R 261292 CDS YP_004695835.1 339484049 10934779 2847441..2847731 1 NC_015731.1 KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein 2847731 10934779 Nit79A3_2674 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695835.1 2847441 D 261292 CDS YP_004695836.1 339484050 10934780 2847722..2848069 1 NC_015731.1 KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein 2848069 10934780 Nit79A3_2675 Nitrosomonas sp. Is79A3 IS66 Orf2 family protein YP_004695836.1 2847722 D 261292 CDS YP_004695837.1 339484051 10934781 2848119..2849702 1 NC_015731.1 KEGG: nit:NAL212_0062 transposase IS66; manually curated; PFAM: Transposase, IS66; transposase IS66 2849702 10934781 Nit79A3_2676 Nitrosomonas sp. Is79A3 transposase IS66 YP_004695837.1 2848119 D 261292 CDS YP_004695838.1 339484052 10934782 complement(2850132..2850539) 1 NC_015731.1 KEGG: nit:NAL212_0951 hypothetical protein; hypothetical protein 2850539 10934782 Nit79A3_2677 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695838.1 2850132 R 261292 CDS YP_004695839.1 339484053 10934783 complement(2850536..2850769) 1 NC_015731.1 hypothetical protein 2850769 10934783 Nit79A3_2678 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695839.1 2850536 R 261292 CDS YP_004695840.1 339484054 10934784 2851499..2852182 1 NC_015731.1 KEGG: scl:sce3476 hypothetical protein; hypothetical protein 2852182 10934784 Nit79A3_2679 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695840.1 2851499 D 261292 CDS YP_004695841.1 339484055 10934785 complement(2852445..2853050) 1 NC_015731.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: nit:NAL212_2526 peptidase S24/S26A/S26B, conserved region; peptidase S24/S26A/S26B 2853050 10934785 Nit79A3_2680 Nitrosomonas sp. Is79A3 peptidase S24/S26A/S26B YP_004695841.1 2852445 R 261292 CDS YP_004695842.1 339484056 10934787 2853619..2853732 1 NC_015731.1 hypothetical protein 2853732 10934787 Nit79A3_2682 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695842.1 2853619 D 261292 CDS YP_004695843.1 339484057 10934790 2854359..2855321 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 2855321 10934790 Nit79A3_2686 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695843.1 2854359 D 261292 CDS YP_004695844.1 339484058 10934791 complement(2856728..2856928) 1 NC_015731.1 KEGG: nit:NAL212_0154 ATPase, P-type (transporting), HAD superfamily, subfamily IC; hypothetical protein 2856928 10934791 Nit79A3_2687 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695844.1 2856728 R 261292 CDS YP_004695845.1 339484059 10934792 complement(2857029..2857583) 1 NC_015731.1 PFAM: Methyltransferase type 11; KEGG: nit:NAL212_0155 methyltransferase type 11; type 11 methyltransferase 2857583 10934792 Nit79A3_2688 Nitrosomonas sp. Is79A3 type 11 methyltransferase YP_004695845.1 2857029 R 261292 CDS YP_004695846.1 339484060 10934793 complement(2857580..2860726) 1 NC_015731.1 KEGG: nit:NAL212_0156 heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; CzcA family heavy metal efflux pump 2860726 10934793 Nit79A3_2689 Nitrosomonas sp. Is79A3 CzcA family heavy metal efflux pump YP_004695846.1 2857580 R 261292 CDS YP_004695847.1 339484061 10934794 complement(2860728..2862320) 1 NC_015731.1 TIGRFAM: Secretion protein HlyD; KEGG: nit:NAL212_0157 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit 2862320 10934794 Nit79A3_2690 Nitrosomonas sp. Is79A3 RND family efflux transporter MFP subunit YP_004695847.1 2860728 R 261292 CDS YP_004695848.1 339484062 10934795 complement(2862345..2863691) 1 NC_015731.1 PFAM: Outer membrane efflux protein; KEGG: nit:NAL212_0158 outer membrane efflux protein; outer membrane efflux protein 2863691 10934795 Nit79A3_2691 Nitrosomonas sp. Is79A3 outer membrane efflux protein YP_004695848.1 2862345 R 261292 CDS YP_004695849.1 339484063 10934796 complement(2863908..2864291) 1 NC_015731.1 KEGG: nit:NAL212_0160 hypothetical protein; hypothetical protein 2864291 10934796 Nit79A3_2692 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695849.1 2863908 R 261292 CDS YP_004695850.1 339484064 10934797 complement(2864351..2865949) 1 NC_015731.1 KEGG: nit:NAL212_0216 TPR repeat-containing protein; TPR repeat-containing protein 2865949 10934797 Nit79A3_2693 Nitrosomonas sp. Is79A3 TPR repeat-containing protein YP_004695850.1 2864351 R 261292 CDS YP_004695851.1 339484065 10934798 complement(2866024..2866488) 1 NC_015731.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: nit:NAL212_0215 transcriptional regulator, MerR family; SMART: HTH transcriptional regulator, MerR; MarR family transcriptional regulator 2866488 10934798 Nit79A3_2694 Nitrosomonas sp. Is79A3 MarR family transcriptional regulator YP_004695851.1 2866024 R 261292 CDS YP_004695852.1 339484066 10934799 complement(2866498..2866974) 1 NC_015731.1 KEGG: nit:NAL212_0214 hypothetical protein; hypothetical protein 2866974 10934799 Nit79A3_2695 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695852.1 2866498 R 261292 CDS YP_004695853.1 339484067 10934801 complement(2867533..2868348) 1 NC_015731.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nmu:Nmul_A0101 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2868348 10934801 Nit79A3_2697 Nitrosomonas sp. Is79A3 short-chain dehydrogenase/reductase SDR YP_004695853.1 2867533 R 261292 CDS YP_004695854.1 339484068 10934802 2868866..2869738 1 NC_015731.1 PFAM: CoA-binding; KEGG: rfr:Rfer_1518 CoA-binding; CoA-binding domain-containing protein 2869738 10934802 Nit79A3_2698 Nitrosomonas sp. Is79A3 CoA-binding domain-containing protein YP_004695854.1 2868866 D 261292 CDS YP_004695855.1 339484069 10934803 2869742..2870776 1 NC_015731.1 TIGRFAM: RNA 3'-terminal phosphate cyclase, subgroup; HAMAP: RNA 3'-terminal phosphate cyclase predicted; KEGG: nmu:Nmul_A2158 RNA 3'-terminal-phosphate cyclase; PFAM: RNA 3'-terminal phosphate cyclase-like; RNA 3'-terminal phosphate cyclase, insert region; RNA 3'-terminal phosphate cyclase 2870776 10934803 Nit79A3_2699 Nitrosomonas sp. Is79A3 RNA 3'-terminal phosphate cyclase YP_004695855.1 2869742 D 261292 CDS YP_004695856.1 339484070 10934804 2870779..2871069 1 NC_015731.1 PFAM: Uncharacterised protein family UPF0248; KEGG: tbd:Tbd_1579 hypothetical protein; hypothetical protein 2871069 10934804 Nit79A3_2700 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695856.1 2870779 D 261292 CDS YP_004695857.1 339484071 10934805 complement(2871066..2871635) 1 NC_015731.1 KEGG: afr:AFE_2093 hypothetical protein; hypothetical protein 2871635 10934805 Nit79A3_2701 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695857.1 2871066 R 261292 CDS YP_004695858.1 339484072 10934806 complement(2871628..2873211) 1 NC_015731.1 KEGG: nit:NAL212_0062 transposase IS66; manually curated; PFAM: Transposase, IS66; transposase IS66 2873211 10934806 Nit79A3_2702 Nitrosomonas sp. Is79A3 transposase IS66 YP_004695858.1 2871628 R 261292 CDS YP_004695859.1 339484073 10934807 complement(2873261..2873608) 1 NC_015731.1 KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein 2873608 10934807 Nit79A3_2703 Nitrosomonas sp. Is79A3 IS66 Orf2 family protein YP_004695859.1 2873261 R 261292 CDS YP_004695860.1 339484074 10934808 complement(2873599..2873889) 1 NC_015731.1 KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein 2873889 10934808 Nit79A3_2704 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695860.1 2873599 R 261292 CDS YP_004695861.1 339484075 10934809 complement(2873938..2875068) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: bxe:Bxe_C1199 hypothetical protein; transposase IS4 family protein 2875068 10934809 Nit79A3_2705 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695861.1 2873938 R 261292 CDS YP_004695862.1 339484076 10934810 2875523..2875921 1 NC_015731.1 KEGG: nmu:Nmul_A0025 TraR/DksA family transcriptional regulator; TraR/DksA family transcriptional regulator 2875921 10934810 Nit79A3_2706 Nitrosomonas sp. Is79A3 TraR/DksA family transcriptional regulator YP_004695862.1 2875523 D 261292 CDS YP_004695863.1 339484077 10934811 2876546..2877094 1 NC_015731.1 PFAM: FecR protein; KEGG: nit:NAL212_1117 FecR protein; anti-FecI sigma factor FecR 2877094 10934811 Nit79A3_2707 Nitrosomonas sp. Is79A3 anti-FecI sigma factor FecR YP_004695863.1 2876546 D 261292 CDS YP_004695864.1 339484078 10934813 complement(2877627..2878862) 1 NC_015731.1 PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; Sporulation/cell division region, bacteria; KEGG: nit:NAL212_1397 serine-type D-Ala-D-Ala carboxypeptidase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 2878862 10934813 Nit79A3_2709 Nitrosomonas sp. Is79A3 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_004695864.1 2877627 R 261292 CDS YP_004695865.1 339484079 10934814 2879355..2881268 1 NC_015731.1 KEGG: gvi:gll0213 hypothetical protein; PFAM: Cell surface receptor IPT/TIG; SMART: Cell surface receptor IPT/TIG; cell surface receptor IPT/TIG domain-containing protein 2881268 10934814 Nit79A3_2710 Nitrosomonas sp. Is79A3 cell surface receptor IPT/TIG domain-containing protein YP_004695865.1 2879355 D 261292 CDS YP_004695866.1 339484080 10934815 2881722..2882234 1 NC_015731.1 KEGG: neu:NE1865 CheW-like domain-containing protein; PFAM: CheW-like protein; SMART: CheW-like protein; chemotaxis protein CheW 2882234 10934815 Nit79A3_2711 Nitrosomonas sp. Is79A3 chemotaxis protein CheW YP_004695866.1 2881722 D 261292 CDS YP_004695867.1 339484081 10934816 2882279..2884006 1 NC_015731.1 KEGG: nit:NAL212_0266 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; methyl-accepting chemotaxis sensory transducer 2884006 10934816 Nit79A3_2712 Nitrosomonas sp. Is79A3 methyl-accepting chemotaxis sensory transducer YP_004695867.1 2882279 D 261292 CDS YP_004695868.1 339484082 10934817 2884619..2885131 1 NC_015731.1 KEGG: neu:NE1865 CheW-like domain-containing protein; PFAM: CheW-like protein; SMART: CheW-like protein; chemotaxis protein CheW 2885131 10934817 Nit79A3_2713 Nitrosomonas sp. Is79A3 chemotaxis protein CheW YP_004695868.1 2884619 D 261292 CDS YP_004695869.1 339484083 10934818 2885177..2886901 1 NC_015731.1 KEGG: nit:NAL212_0266 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; methyl-accepting chemotaxis sensory transducer 2886901 10934818 Nit79A3_2714 Nitrosomonas sp. Is79A3 methyl-accepting chemotaxis sensory transducer YP_004695869.1 2885177 D 261292 CDS YP_004695870.1 339484084 10934819 2887779..2888291 1 NC_015731.1 KEGG: nit:NAL212_0265 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; chemotaxis protein CheW 2888291 10934819 Nit79A3_2715 Nitrosomonas sp. Is79A3 chemotaxis protein CheW YP_004695870.1 2887779 D 261292 CDS YP_004695871.1 339484085 10934820 2888355..2890091 1 NC_015731.1 KEGG: nit:NAL212_0266 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; methyl-accepting chemotaxis sensory transducer 2890091 10934820 Nit79A3_2716 Nitrosomonas sp. Is79A3 methyl-accepting chemotaxis sensory transducer YP_004695871.1 2888355 D 261292 CDS YP_004695872.1 339484086 10934821 2890163..2890456 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: gca:Galf_0832 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2890456 10934821 Nit79A3_2717 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004695872.1 2890163 D 261292 CDS YP_004695873.1 339484087 10934822 2890453..2891331 1 NC_015731.1 PFAM: Integrase, catalytic core; KEGG: rso:RSp0548 ISRSO8-transposase orfB protein; Integrase catalytic subunit 2891331 10934822 Nit79A3_2718 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004695873.1 2890453 D 261292 CDS YP_004695874.1 339484088 10934823 complement(2891525..2893252) 1 NC_015731.1 KEGG: nit:NAL212_0266 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; methyl-accepting chemotaxis sensory transducer 2893252 10934823 Nit79A3_2719 Nitrosomonas sp. Is79A3 methyl-accepting chemotaxis sensory transducer YP_004695874.1 2891525 R 261292 CDS YP_004695875.1 339484089 10934824 complement(2893297..2893809) 1 NC_015731.1 KEGG: nit:NAL212_0265 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; chemotaxis protein CheW 2893809 10934824 Nit79A3_2720 Nitrosomonas sp. Is79A3 chemotaxis protein CheW YP_004695875.1 2893297 R 261292 CDS YP_004695876.1 339484090 10934825 2894223..2894609 1 NC_015731.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nit:NAL212_0264 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 2894609 10934825 Nit79A3_2721 Nitrosomonas sp. Is79A3 Glyoxalase/bleomycin resistance protein/dioxygenase YP_004695876.1 2894223 D 261292 CDS YP_004695877.1 339484091 10934826 complement(2894614..2895399) 1 NC_015731.1 PFAM: Peptidase M48, Ste24p; KEGG: nit:NAL212_0263 peptidase M48 Ste24p; peptidase M48 Ste24p 2895399 10934826 Nit79A3_2722 Nitrosomonas sp. Is79A3 peptidase M48 Ste24p YP_004695877.1 2894614 R 261292 CDS YP_004695878.1 339484092 10934827 2895565..2895771 1 NC_015731.1 PFAM: Dodecin flavoprotein; KEGG: nit:NAL212_0262 hypothetical protein; hypothetical protein 2895771 10934827 Nit79A3_2723 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695878.1 2895565 D 261292 CDS YP_004695879.1 339484093 10934828 2896086..2896322 1 NC_015731.1 KEGG: fbl:Fbal_0566 hypothetical protein; hypothetical protein 2896322 10934828 Nit79A3_2724 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695879.1 2896086 D 261292 CDS YP_004695880.1 339484094 10934829 2896387..2898987 1 NC_015731.1 TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: nit:NAL212_0261 leucyl-tRNA synthetase; leucyl-tRNA synthetase 2898987 10934829 Nit79A3_2725 Nitrosomonas sp. Is79A3 leucyl-tRNA synthetase YP_004695880.1 2896387 D 261292 CDS YP_004695881.1 339484095 10934830 2899005..2899505 1 NC_015731.1 KEGG: nit:NAL212_0260 rare lipoprotein B; rare lipoprotein B 2899505 10934830 Nit79A3_2726 Nitrosomonas sp. Is79A3 rare lipoprotein B YP_004695881.1 2899005 D 261292 CDS YP_004695882.1 339484096 10934831 2899531..2900571 1 NC_015731.1 KEGG: nit:NAL212_0259 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta 2900571 10934831 Nit79A3_2727 Nitrosomonas sp. Is79A3 DNA polymerase III subunit delta YP_004695882.1 2899531 D 261292 CDS YP_004695883.1 339484097 10934832 2900587..2900823 1 NC_015731.1 hypothetical protein 2900823 10934832 Nit79A3_2728 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695883.1 2900587 D 261292 CDS YP_004695884.1 339484098 10934833 2900763..2901089 1 NC_015731.1 hypothetical protein 2901089 10934833 Nit79A3_2729 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695884.1 2900763 D 261292 CDS YP_004695885.1 339484099 10934834 2901166..2902782 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: nit:NAL212_3145 IS5 family transposase; transposase IS4 family protein 2902782 10934834 Nit79A3_2730 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695885.1 2901166 D 261292 CDS YP_004695886.1 339484100 10934835 2902949..2903407 1 NC_015731.1 hypothetical protein 2903407 10934835 Nit79A3_2731 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695886.1 2902949 D 261292 CDS YP_004695887.1 339484101 10934836 complement(2903454..2907164) 1 NC_015731.1 KEGG: nit:NAL212_0438 methionine synthase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: Homocysteine S-methyltransferase; Dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12 dependent methionine synthase, activation region; methionine synthase 2907164 10934836 Nit79A3_2732 Nitrosomonas sp. Is79A3 methionine synthase YP_004695887.1 2903454 R 261292 CDS YP_004695888.1 339484102 10934837 complement(2907890..2908705) 1 NC_015731.1 TIGRFAM: Zinc finger/thioredoxin KEGG: nit:NAL212_0385 hypothetical protein; hypothetical protein 2908705 10934837 Nit79A3_2733 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695888.1 2907890 R 261292 CDS YP_004695889.1 339484103 10934838 complement(2908823..2909740) 1 NC_015731.1 TIGRFAM: Ribosomal protein L11 methyltransferase; HAMAP: Ribosomal protein L11 methyltransferase; KEGG: nit:NAL212_0384 50S ribosomal protein L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase; 50S ribosomal protein L11 methyltransferase 2909740 10934838 Nit79A3_2734 Nitrosomonas sp. Is79A3 50S ribosomal protein L11 methyltransferase YP_004695889.1 2908823 R 261292 CDS YP_004695890.1 339484104 10934839 complement(2909794..2911149) 1 NC_015731.1 KEGG: nit:NAL212_0383 acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; acetyl-CoA carboxylase, biotin carboxylase 2911149 10934839 Nit79A3_2735 Nitrosomonas sp. Is79A3 acetyl-CoA carboxylase, biotin carboxylase YP_004695890.1 2909794 R 261292 CDS YP_004695891.1 339484105 10934840 complement(2911175..2911657) 1 NC_015731.1 KEGG: nit:NAL212_0382 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin/lipoyl attachment; acetyl-CoA carboxylase, biotin carboxyl carrier protein 2911657 10934840 Nit79A3_2736 Nitrosomonas sp. Is79A3 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_004695891.1 2911175 R 261292 CDS YP_004695892.1 339484106 10934841 complement(2911808..2912260) 1 NC_015731.1 TIGRFAM: Dehydroquinase, class II; HAMAP: Dehydroquinase, class II; KEGG: nit:NAL212_0381 3-dehydroquinate dehydratase, type II; PFAM: Dehydroquinase, class II; 3-dehydroquinate dehydratase 2912260 10934841 Nit79A3_2737 Nitrosomonas sp. Is79A3 3-dehydroquinate dehydratase YP_004695892.1 2911808 R 261292 CDS YP_004695893.1 339484107 10934843 complement(2912707..2913618) 1 NC_015731.1 PFAM: Restriction endonuclease, type IV-like, Mrr; KEGG: hse:Hsero_1214 5-methylcytosine-specific restriction endonuclease; restriction endonuclease 2913618 10934843 Nit79A3_2738 Nitrosomonas sp. Is79A3 restriction endonuclease YP_004695893.1 2912707 R 261292 CDS YP_004695894.1 339484108 10934844 2913903..2914973 1 NC_015731.1 PFAM: Integrase, catalytic core, phage; KEGG: lpp:lpp2123 hypothetical protein; integrase 2914973 10934844 Nit79A3_2739 Nitrosomonas sp. Is79A3 integrase YP_004695894.1 2913903 D 261292 CDS YP_004695895.1 339484109 10934845 2914982..2915911 1 NC_015731.1 hypothetical protein 2915911 10934845 Nit79A3_2740 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695895.1 2914982 D 261292 CDS YP_004695896.1 339484110 10934846 2916041..2916328 1 NC_015731.1 KEGG: noc:Noc_0050 hypothetical protein; hypothetical protein 2916328 10934846 Nit79A3_2741 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695896.1 2916041 D 261292 CDS YP_004695897.1 339484111 10934849 2917640..2918944 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 2918944 10934849 Nit79A3_2744 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695897.1 2917640 D 261292 CDS YP_004695898.1 339484112 10934850 2920440..2920700 1 NC_015731.1 KEGG: ctt:CtCNB1_2990 hypothetical protein; hypothetical protein 2920700 10934850 Nit79A3_2745 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695898.1 2920440 D 261292 CDS YP_004695899.1 339484113 10934851 2920697..2920903 1 NC_015731.1 hypothetical protein 2920903 10934851 Nit79A3_2746 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695899.1 2920697 D 261292 CDS YP_004695900.1 339484114 10934852 2921301..2921591 1 NC_015731.1 KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein 2921591 10934852 Nit79A3_2747 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695900.1 2921301 D 261292 CDS YP_004695901.1 339484115 10934853 2921582..2921929 1 NC_015731.1 KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein 2921929 10934853 Nit79A3_2748 Nitrosomonas sp. Is79A3 IS66 Orf2 family protein YP_004695901.1 2921582 D 261292 CDS YP_004695902.1 339484116 10934854 2921979..2923562 1 NC_015731.1 KEGG: nit:NAL212_0062 transposase IS66; manually curated; PFAM: Transposase, IS66; transposase IS66 2923562 10934854 Nit79A3_2749 Nitrosomonas sp. Is79A3 transposase IS66 YP_004695902.1 2921979 D 261292 CDS YP_004695903.1 339484117 10934855 complement(2924000..2924836) 1 NC_015731.1 KEGG: hypothetical protein; hypothetical protein 2924836 10934855 Nit79A3_2750 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695903.1 2924000 R 261292 CDS YP_004695904.1 339484118 10934856 complement(2925030..2926547) 1 NC_015731.1 hypothetical protein 2926547 10934856 Nit79A3_2751 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695904.1 2925030 R 261292 CDS YP_004695905.1 339484119 10934857 complement(2926880..2927485) 1 NC_015731.1 KEGG: pph:Ppha_0795 hypothetical protein; hypothetical protein 2927485 10934857 Nit79A3_2752 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695905.1 2926880 R 261292 CDS YP_004695906.1 339484120 10934858 complement(2928006..2929172) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: dar:Daro_2223 transposase IS4; transposase IS4 family protein 2929172 10934858 Nit79A3_2753 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004695906.1 2928006 R 261292 CDS YP_004695907.1 339484121 10934859 2929366..2929746 1 NC_015731.1 hypothetical protein 2929746 10934859 Nit79A3_2754 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695907.1 2929366 D 261292 CDS YP_004695908.1 339484122 10934860 complement(2929824..2930144) 1 NC_015731.1 KEGG: nit:NAL212_1538 hypothetical protein; hypothetical protein 2930144 10934860 Nit79A3_2755 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695908.1 2929824 R 261292 CDS YP_004695909.1 339484123 10934861 complement(2930629..2930781) 1 NC_015731.1 hypothetical protein 2930781 10934861 Nit79A3_2756 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695909.1 2930629 R 261292 CDS YP_004695910.1 339484124 10934862 complement(2931011..2931658) 1 NC_015731.1 KEGG: rsl:RPSI07_mp0498 cob(II)yrinic acid a,c-diamide reductase (blub); TIGRFAM: Cob(II)yrinic acid a,c-diamide reductase; PFAM: Nitroreductase-like; cob(II)yrinic acid a,c-diamide reductase 2931658 10934862 Nit79A3_2757 Nitrosomonas sp. Is79A3 cob(II)yrinic acid a,c-diamide reductase YP_004695910.1 2931011 R 261292 CDS YP_004695911.1 339484125 10934863 complement(2931945..2932388) 1 NC_015731.1 KEGG: nit:NAL212_2432 hypothetical protein; hypothetical protein 2932388 10934863 Nit79A3_2758 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695911.1 2931945 R 261292 CDS YP_004695912.1 339484126 10934864 2933308..2933547 1 NC_015731.1 hypothetical protein 2933547 10934864 Nit79A3_2759 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695912.1 2933308 D 261292 CDS YP_004695913.1 339484127 10934865 complement(2933554..2933754) 1 NC_015731.1 hypothetical protein 2933754 10934865 Nit79A3_2760 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695913.1 2933554 R 261292 CDS YP_004695914.1 339484128 10934866 2933902..2934144 1 NC_015731.1 hypothetical protein 2934144 10934866 Nit79A3_2761 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695914.1 2933902 D 261292 CDS YP_004695915.1 339484129 10934867 complement(2934275..2934973) 1 NC_015731.1 KEGG: YecA family protein; TIGRFAM: YgfB/YecA protein; PFAM: SEC-C motif; hypothetical protein 2934973 10934867 Nit79A3_2762 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695915.1 2934275 R 261292 CDS YP_004695916.1 339484130 10934868 complement(2934999..2935331) 1 NC_015731.1 PFAM: Helix-turn-helix type 3; KEGG: nit:NAL212_0368 helix-turn-helix domain-containing protein; helix-turn-helix domain-containing protein 2935331 10934868 Nit79A3_2763 Nitrosomonas sp. Is79A3 helix-turn-helix domain-containing protein YP_004695916.1 2934999 R 261292 CDS YP_004695917.1 339484131 10934871 complement(2936524..2937558) 1 NC_015731.1 KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase 2937558 10934871 Nit79A3_2766 Nitrosomonas sp. Is79A3 isxo7 transposase YP_004695917.1 2936524 R 261292 CDS YP_004695918.1 339484132 10934872 2937727..2938704 1 NC_015731.1 KEGG: neu:NE0744 hypothetical protein; hypothetical protein 2938704 10934872 Nit79A3_2767 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695918.1 2937727 D 261292 CDS YP_004695919.1 339484133 10934873 complement(2938759..2939466) 1 NC_015731.1 KEGG: lch:Lcho_2324 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 2939466 10934873 Nit79A3_2768 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004695919.1 2938759 R 261292 CDS YP_004695920.1 339484134 10934874 complement(2939805..2940311) 1 NC_015731.1 KEGG: cyj:Cyan7822_2864 hypothetical protein; hypothetical protein 2940311 10934874 Nit79A3_2769 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695920.1 2939805 R 261292 CDS YP_004695921.1 339484135 10934875 complement(2940397..2940780) 1 NC_015731.1 KEGG: nit:NAL212_1188 hypothetical protein; hypothetical protein 2940780 10934875 Nit79A3_2770 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695921.1 2940397 R 261292 CDS YP_004695922.1 339484136 10934876 complement(2940805..2941017) 1 NC_015731.1 KEGG: nit:NAL212_1187 hypothetical protein; hypothetical protein 2941017 10934876 Nit79A3_2771 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695922.1 2940805 R 261292 CDS YP_004695923.1 339484137 10934878 complement(2942006..2942377) 1 NC_015731.1 PFAM: Protein of unknown function DUF202; KEGG: gpb:HDN1F_14580 protein of unknown function DUF202; hypothetical protein 2942377 10934878 Nit79A3_2773 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695923.1 2942006 R 261292 CDS YP_004695924.1 339484138 10934879 complement(2942693..2943331) 1 NC_015731.1 KEGG: nit:NAL212_1181 hypothetical protein; hypothetical protein 2943331 10934879 Nit79A3_2774 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695924.1 2942693 R 261292 CDS YP_004695925.1 339484139 10934880 complement(2943379..2943669) 1 NC_015731.1 KEGG: nit:NAL212_1180 hypothetical protein; hypothetical protein 2943669 10934880 Nit79A3_2775 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695925.1 2943379 R 261292 CDS YP_004695926.1 339484140 10934881 complement(2943723..2944832) 1 NC_015731.1 PFAM: Lipase, class 3; KEGG: ppr:PBPRA1385 hypothetical protein; lipase class 3 2944832 10934881 Nit79A3_2776 Nitrosomonas sp. Is79A3 lipase class 3 YP_004695926.1 2943723 R 261292 CDS YP_004695927.1 339484141 10934882 complement(2945067..2945738) 1 NC_015731.1 TIGRFAM: Dethiobiotin synthase; HAMAP: Dethiobiotin synthase; KEGG: nit:NAL212_1178 dethiobiotin synthase; PFAM: Cobyrinic acid a,c-diamide synthase; Dethiobiotin synthetase 2945738 10934882 Nit79A3_2777 Nitrosomonas sp. Is79A3 Dethiobiotin synthetase YP_004695927.1 2945067 R 261292 CDS YP_004695928.1 339484142 10934883 complement(2945749..2946630) 1 NC_015731.1 KEGG: nit:NAL212_1177 biotin biosynthesis protein BioC; TIGRFAM: Biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; biotin biosynthesis protein BioC 2946630 10934883 Nit79A3_2778 Nitrosomonas sp. Is79A3 biotin biosynthesis protein BioC YP_004695928.1 2945749 R 261292 CDS YP_004695929.1 339484143 10934884 complement(2946608..2947378) 1 NC_015731.1 TIGRFAM: BioH; HAMAP: Carboxylesterase bioH; KEGG: nit:NAL212_1176 BioH protein; PFAM: Alpha/beta hydrolase fold-1; Carboxylesterase bioH 2947378 10934884 Nit79A3_2779 Nitrosomonas sp. Is79A3 Carboxylesterase bioH YP_004695929.1 2946608 R 261292 CDS YP_004695930.1 339484144 10934885 complement(2947375..2948541) 1 NC_015731.1 TIGRFAM: 8-amino-7-oxononanoate synthase; HAMAP: 8-amino-7-oxononanoate synthase; KEGG: nit:NAL212_1175 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/II; 8-amino-7-oxononanoate synthase 2948541 10934885 Nit79A3_2780 Nitrosomonas sp. Is79A3 8-amino-7-oxononanoate synthase YP_004695930.1 2947375 R 261292 CDS YP_004695931.1 339484145 10934886 complement(2948545..2949549) 1 NC_015731.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Biotin synthase; KEGG: nit:NAL212_1174 biotin synthase; HAMAP: Biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; Biotin synthase 2949549 10934886 Nit79A3_2781 Nitrosomonas sp. Is79A3 Biotin synthase YP_004695931.1 2948545 R 261292 CDS YP_004695932.1 339484146 10934887 2949681..2950376 1 NC_015731.1 PFAM: Phosphoribosyltransferase; KEGG: nit:NAL212_1173 phosphoribosyltransferase; phosphoribosyltransferase 2950376 10934887 Nit79A3_2782 Nitrosomonas sp. Is79A3 phosphoribosyltransferase YP_004695932.1 2949681 D 261292 CDS YP_004695933.1 339484147 10934888 2950402..2950866 1 NC_015731.1 PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: nit:NAL212_1172 RNA methyltransferase, TrmH family, group 2; tRNA/rRNA methyltransferase SpoU 2950866 10934888 Nit79A3_2783 Nitrosomonas sp. Is79A3 tRNA/rRNA methyltransferase SpoU YP_004695933.1 2950402 D 261292 CDS YP_004695934.1 339484148 10934889 complement(2950874..2952970) 1 NC_015731.1 KEGG: nit:NAL212_1171 type IV pilus secretin PilQ; TIGRFAM: Type IV pilus secretin PilQ; PFAM: Type II/III secretion system; Secretin/TonB, short N-terminal; type IV pilus secretin PilQ 2952970 10934889 Nit79A3_2784 Nitrosomonas sp. Is79A3 type IV pilus secretin PilQ YP_004695934.1 2950874 R 261292 CDS YP_004695935.1 339484149 10934890 complement(2952981..2953499) 1 NC_015731.1 PFAM: Pilus assembly protein PilP; KEGG: nit:NAL212_1170 pilus assembly protein PilP; Pilus assembly protein PilP 2953499 10934890 Nit79A3_2785 Nitrosomonas sp. Is79A3 Pilus assembly protein PilP YP_004695935.1 2952981 R 261292 CDS YP_004695936.1 339484150 10934891 complement(2953503..2954117) 1 NC_015731.1 PFAM: Pilus assembly protein, PilO; KEGG: nit:NAL212_1169 fimbrial type-4 assembly membrane transmembrane protein; Pilus assembly protein PilO 2954117 10934891 Nit79A3_2786 Nitrosomonas sp. Is79A3 Pilus assembly protein PilO YP_004695936.1 2953503 R 261292 CDS YP_004695937.1 339484151 10934892 complement(2954131..2954721) 1 NC_015731.1 PFAM: Fimbrial assembly; KEGG: nit:NAL212_1168 fimbrial assembly family protein; Fimbrial assembly family protein 2954721 10934892 Nit79A3_2787 Nitrosomonas sp. Is79A3 Fimbrial assembly family protein YP_004695937.1 2954131 R 261292 CDS YP_004695938.1 339484152 10934893 complement(2954718..2955821) 1 NC_015731.1 TIGRFAM: Type IV pilus assembly protein PilM; KEGG: nit:NAL212_1167 type IV pilus assembly protein PilM; type IV pilus assembly protein PilM 2955821 10934893 Nit79A3_2788 Nitrosomonas sp. Is79A3 type IV pilus assembly protein PilM YP_004695938.1 2954718 R 261292 CDS YP_004695939.1 339484153 10934894 2956045..2958363 1 NC_015731.1 KEGG: nit:NAL212_1166 penicillin-binding protein, 1A family; TIGRFAM: Penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; penicillin-binding protein, 1A family 2958363 10934894 Nit79A3_2789 Nitrosomonas sp. Is79A3 penicillin-binding protein, 1A family YP_004695939.1 2956045 D 261292 CDS YP_004695940.1 339484154 10934895 complement(2958396..2959361) 1 NC_015731.1 PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; KEGG: nit:NAL212_1165 porphobilinogen synthase; delta-aminolevulinic acid dehydratase 2959361 10934895 Nit79A3_2790 Nitrosomonas sp. Is79A3 delta-aminolevulinic acid dehydratase YP_004695940.1 2958396 R 261292 CDS YP_004695941.1 339484155 10934896 complement(2959616..2960212) 1 NC_015731.1 TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC; KEGG: nit:NAL212_1164 ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein engB 2960212 10934896 Nit79A3_2791 Nitrosomonas sp. Is79A3 GTP-binding protein engB YP_004695941.1 2959616 R 261292 CDS YP_004695942.1 339484156 10934897 complement(2960246..2960980) 1 NC_015731.1 TIGRFAM: Bordetella pertussis Bvg accessory factor; HAMAP: Type III pantothenate kinase; KEGG: nit:NAL212_1163 transcriptional acitvator, Baf family; PFAM: Bordetella pertussis Bvg accessory factor; transcriptional acitvator, Baf family 2960980 10934897 Nit79A3_2792 Nitrosomonas sp. Is79A3 transcriptional acitvator, Baf family YP_004695942.1 2960246 R 261292 CDS YP_004695943.1 339484157 10934898 complement(2960988..2961977) 1 NC_015731.1 KEGG: nit:NAL212_1162 biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11; Biotin protein ligase, C-terminal; biotin/acetyl-CoA-carboxylase ligase 2961977 10934898 Nit79A3_2793 Nitrosomonas sp. Is79A3 biotin/acetyl-CoA-carboxylase ligase YP_004695943.1 2960988 R 261292 CDS YP_004695944.1 339484158 10934899 complement(2962075..2962470) 1 NC_015731.1 TIGRFAM: Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; KEGG: nit:NAL212_1161 50S ribosomal protein L17; PFAM: Ribosomal protein L17; 50S ribosomal protein L17 2962470 10934899 Nit79A3_2794 Nitrosomonas sp. Is79A3 50S ribosomal protein L17 YP_004695944.1 2962075 R 261292 CDS YP_004695945.1 339484159 10934900 complement(2962457..2963461) 1 NC_015731.1 SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; KEGG: nit:NAL212_1160 DNA-directed RNA polymerase, alpha subunit; HAMAP: DNA-directed RNA polymerase, alpha subunit; PFAM: DNA-directed RNA polymerase, insert; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal; DNA-directed RNA polymerase subunit alpha 2963461 10934900 Nit79A3_2795 Nitrosomonas sp. Is79A3 DNA-directed RNA polymerase subunit alpha YP_004695945.1 2962457 R 261292 CDS YP_004695946.1 339484160 10934901 complement(2963504..2964175) 1 NC_015731.1 TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: Ribosomal protein S4; RNA-binding S4; KEGG: nit:NAL212_1159 30S ribosomal protein S4; SMART: RNA-binding S4; 30S ribosomal protein S4 2964175 10934901 Nit79A3_2796 Nitrosomonas sp. Is79A3 30S ribosomal protein S4 YP_004695946.1 2963504 R 261292 CDS YP_004695947.1 339484161 10934902 complement(2964141..2964530) 1 NC_015731.1 KEGG: nit:NAL212_1158 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; PFAM: Ribosomal protein S11; 30S ribosomal protein S11 2964530 10934902 Nit79A3_2797 Nitrosomonas sp. Is79A3 30S ribosomal protein S11 YP_004695947.1 2964141 R 261292 CDS YP_004695948.1 339484162 10934903 complement(2964581..2964940) 1 NC_015731.1 KEGG: nit:NAL212_1157 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13; 30S ribosomal protein S13 2964940 10934903 Nit79A3_2798 Nitrosomonas sp. Is79A3 30S ribosomal protein S13 YP_004695948.1 2964581 R 261292 CDS YP_004695949.1 339484163 10934904 complement(2964979..2965092) 1 NC_015731.1 PFAM: Ribosomal protein L36; manually curated; TIGRFAM: Ribosomal protein L36; KEGG: ftn:FTN_0260 50S ribosomal protein L36; HAMAP: Ribosomal protein L36; 50S ribosomal protein L36 2965092 10934904 Nit79A3_2799 Nitrosomonas sp. Is79A3 50S ribosomal protein L36 YP_004695949.1 2964979 R 261292 CDS YP_004695950.1 339484164 10934905 complement(2965152..2965370) 1 NC_015731.1 TIGRFAM: Translation initiation factor IF-1; HAMAP: Translation initiation factor IF-1; KEGG: nit:NAL212_1156 translation initiation factor IF-1; PFAM: S1, IF1 type; Translation initiation factor IF-1 2965370 10934905 Nit79A3_2800 Nitrosomonas sp. Is79A3 Translation initiation factor IF-1 YP_004695950.1 2965152 R 261292 CDS YP_004695951.1 339484165 10934906 complement(2965388..2966719) 1 NC_015731.1 KEGG: nit:NAL212_1155 preprotein translocase, SecY subunit; TIGRFAM: SecY protein; PFAM: SecY protein; preprotein translocase subunit SecY 2966719 10934906 Nit79A3_2801 Nitrosomonas sp. Is79A3 preprotein translocase subunit SecY YP_004695951.1 2965388 R 261292 CDS YP_004695952.1 339484166 10934907 complement(2966737..2967168) 1 NC_015731.1 KEGG: nit:NAL212_1154 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; PFAM: Ribosomal protein L15; 50S ribosomal protein L15 2967168 10934907 Nit79A3_2802 Nitrosomonas sp. Is79A3 50S ribosomal protein L15 YP_004695952.1 2966737 R 261292 CDS YP_004695953.1 339484167 10934908 complement(2967170..2967358) 1 NC_015731.1 KEGG: dia:Dtpsy_0391 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30p/L7e, conserved region; 50S ribosomal protein L30 2967358 10934908 Nit79A3_2803 Nitrosomonas sp. Is79A3 50S ribosomal protein L30 YP_004695953.1 2967170 R 261292 CDS YP_004695954.1 339484168 10934909 complement(2967351..2967893) 1 NC_015731.1 KEGG: nit:NAL212_1152 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, C-terminal; Ribosomal protein S5, N-terminal; 30S ribosomal protein S5 2967893 10934909 Nit79A3_2804 Nitrosomonas sp. Is79A3 30S ribosomal protein S5 YP_004695954.1 2967351 R 261292 CDS YP_004695955.1 339484169 10934910 complement(2967908..2968264) 1 NC_015731.1 KEGG: nit:NAL212_1151 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal protein L18/L5; 50S ribosomal protein L18 2968264 10934910 Nit79A3_2805 Nitrosomonas sp. Is79A3 50S ribosomal protein L18 YP_004695955.1 2967908 R 261292 CDS YP_004695956.1 339484170 10934911 complement(2968276..2968815) 1 NC_015731.1 KEGG: nit:NAL212_1150 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6, alpha-beta domain; 50S ribosomal protein L6 2968815 10934911 Nit79A3_2806 Nitrosomonas sp. Is79A3 50S ribosomal protein L6 YP_004695956.1 2968276 R 261292 CDS YP_004695957.1 339484171 10934912 complement(2968832..2969227) 1 NC_015731.1 PFAM: Ribosomal protein S8; KEGG: nmu:Nmul_A0781 ribosomal protein S8; 30S ribosomal protein S8 2969227 10934912 Nit79A3_2807 Nitrosomonas sp. Is79A3 30S ribosomal protein S8 YP_004695957.1 2968832 R 261292 CDS YP_004695958.1 339484172 10934913 complement(2969318..2969623) 1 NC_015731.1 KEGG: nit:NAL212_1148 30S ribosomal protein S14; HAMAP: 30S ribosomal protein S14; PFAM: Ribosomal protein S14; 30S ribosomal protein S14 2969623 10934913 Nit79A3_2808 Nitrosomonas sp. Is79A3 30S ribosomal protein S14 YP_004695958.1 2969318 R 261292 CDS YP_004695959.1 339484173 10934914 complement(2969633..2970172) 1 NC_015731.1 PFAM: Ribosomal protein L5; KEGG: nit:NAL212_1147 50S ribosomal protein L5; 50S ribosomal protein L5 2970172 10934914 Nit79A3_2809 Nitrosomonas sp. Is79A3 50S ribosomal protein L5 YP_004695959.1 2969633 R 261292 CDS YP_004695960.1 339484174 10934915 complement(2970190..2970507) 1 NC_015731.1 KEGG: nit:NAL212_1146 50S ribosomal protein L24; TIGRFAM: Ribosomal protein L24; SMART: KOW; 50S ribosomal protein L24 2970507 10934915 Nit79A3_2810 Nitrosomonas sp. Is79A3 50S ribosomal protein L24 YP_004695960.1 2970190 R 261292 CDS YP_004695961.1 339484175 10934916 complement(2970527..2970895) 1 NC_015731.1 manually curated; TIGRFAM: Ribosomal protein L14, bacterial-type; KEGG: nit:NAL212_1145 50S ribosomal protein L14; PFAM: Ribosomal protein L14b/L23e; 50S ribosomal protein L14 2970895 10934916 Nit79A3_2811 Nitrosomonas sp. Is79A3 50S ribosomal protein L14 YP_004695961.1 2970527 R 261292 CDS YP_004695962.1 339484176 10934917 complement(2971073..2971336) 1 NC_015731.1 KEGG: nit:NAL212_1144 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17; 30S ribosomal protein S17 2971336 10934917 Nit79A3_2812 Nitrosomonas sp. Is79A3 30S ribosomal protein S17 YP_004695962.1 2971073 R 261292 CDS YP_004695963.1 339484177 10934918 complement(2971329..2971526) 1 NC_015731.1 KEGG: nit:NAL212_1143 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29; 50S ribosomal protein L29 2971526 10934918 Nit79A3_2813 Nitrosomonas sp. Is79A3 50S ribosomal protein L29 YP_004695963.1 2971329 R 261292 CDS YP_004695964.1 339484178 10934919 complement(2971529..2971945) 1 NC_015731.1 TIGRFAM: Ribosomal protein L16; HAMAP: Ribosomal protein L16; KEGG: nit:NAL212_1142 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; 50S ribosomal protein L16 2971945 10934919 Nit79A3_2814 Nitrosomonas sp. Is79A3 50S ribosomal protein L16 YP_004695964.1 2971529 R 261292 CDS YP_004695965.1 339484179 10934920 complement(2971929..2972723) 1 NC_015731.1 TIGRFAM: Ribosomal protein S3, bacterial; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; KEGG: nit:NAL212_1141 30S ribosomal protein S3; SMART: K Homology; 30S ribosomal protein S3 2972723 10934920 Nit79A3_2815 Nitrosomonas sp. Is79A3 30S ribosomal protein S3 YP_004695965.1 2971929 R 261292 CDS YP_004695966.1 339484180 10934921 complement(2972738..2973085) 1 NC_015731.1 KEGG: nmu:Nmul_A0772 ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22/L17; 50S ribosomal protein L22 2973085 10934921 Nit79A3_2816 Nitrosomonas sp. Is79A3 50S ribosomal protein L22 YP_004695966.1 2972738 R 261292 CDS YP_004695967.1 339484181 10934922 complement(2973095..2973376) 1 NC_015731.1 KEGG: nit:NAL212_1139 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19/S15; 30S ribosomal protein S19 2973376 10934922 Nit79A3_2817 Nitrosomonas sp. Is79A3 30S ribosomal protein S19 YP_004695967.1 2973095 R 261292 CDS YP_004695968.1 339484182 10934923 complement(2973384..2974217) 1 NC_015731.1 KEGG: nit:NAL212_1138 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal protein L2; 50S ribosomal protein L2 2974217 10934923 Nit79A3_2818 Nitrosomonas sp. Is79A3 50S ribosomal protein L2 YP_004695968.1 2973384 R 261292 CDS YP_004695969.1 339484183 10934924 complement(2974217..2974552) 1 NC_015731.1 PFAM: Ribosomal protein L25/L23; KEGG: nit:NAL212_1137 50S ribosomal protein L25/L23; 50S ribosomal protein L25 2974552 10934924 Nit79A3_2819 Nitrosomonas sp. Is79A3 50S ribosomal protein L25 YP_004695969.1 2974217 R 261292 CDS YP_004695970.1 339484184 10934925 complement(2974549..2975169) 1 NC_015731.1 PFAM: Ribosomal protein L4/L1e; KEGG: nit:NAL212_1136 50S ribosomal protein L4/L1e; 50S ribosomal protein L4 2975169 10934925 Nit79A3_2820 Nitrosomonas sp. Is79A3 50S ribosomal protein L4 YP_004695970.1 2974549 R 261292 CDS YP_004695971.1 339484185 10934926 complement(2975202..2975849) 1 NC_015731.1 KEGG: nit:NAL212_1135 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3; 50S ribosomal protein L3 2975849 10934926 Nit79A3_2821 Nitrosomonas sp. Is79A3 50S ribosomal protein L3 YP_004695971.1 2975202 R 261292 CDS YP_004695972.1 339484186 10934927 complement(2975938..2976246) 1 NC_015731.1 TIGRFAM: Ribosomal protein S10, bacterial; HAMAP: 30S ribosomal protein S10; KEGG: neu:NE0400 30S ribosomal protein S10; PFAM: Ribosomal protein S10; 30S ribosomal protein S10 2976246 10934927 Nit79A3_2822 Nitrosomonas sp. Is79A3 30S ribosomal protein S10 YP_004695972.1 2975938 R 261292 CDS YP_004695973.1 339484187 10934928 complement(2976317..2977507) 1 NC_015731.1 KEGG: nit:NAL212_2147 translation elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; translation elongation factor Tu 2977507 10934928 Nit79A3_2823 Nitrosomonas sp. Is79A3 translation elongation factor Tu YP_004695973.1 2976317 R 261292 CDS YP_004695974.1 339484188 10934929 complement(2977539..2979629) 1 NC_015731.1 KEGG: nit:NAL212_1132 translation elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; translation elongation factor G 2979629 10934929 Nit79A3_2824 Nitrosomonas sp. Is79A3 translation elongation factor G YP_004695974.1 2977539 R 261292 CDS YP_004695975.1 339484189 10934930 complement(2979691..2980161) 1 NC_015731.1 KEGG: nit:NAL212_1131 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7; 30S ribosomal protein S7 2980161 10934930 Nit79A3_2825 Nitrosomonas sp. Is79A3 30S ribosomal protein S7 YP_004695975.1 2979691 R 261292 CDS YP_004695976.1 339484190 10934931 complement(2980226..2980603) 1 NC_015731.1 KEGG: nit:NAL212_1130 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacterial-type; PFAM: Ribosomal protein S12/S23; 30S ribosomal protein S12 2980603 10934931 Nit79A3_2826 Nitrosomonas sp. Is79A3 30S ribosomal protein S12 YP_004695976.1 2980226 R 261292 CDS YP_004695977.1 339484191 10934932 complement(2980863..2981348) 1 NC_015731.1 KEGG: nit:NAL212_1129 hypothetical protein; HAMAP: UPF0234 protein yajQ; PFAM: Protein of unknown function DUF520; hypothetical protein 2981348 10934932 Nit79A3_2827 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695977.1 2980863 R 261292 CDS YP_004695978.1 339484192 10934933 complement(2981408..2982634) 1 NC_015731.1 TIGRFAM: Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; KEGG: nit:NAL212_1128 argininosuccinate synthase; PFAM: Argininosuccinate synthase; argininosuccinate synthase 2982634 10934933 Nit79A3_2828 Nitrosomonas sp. Is79A3 argininosuccinate synthase YP_004695978.1 2981408 R 261292 CDS YP_004695979.1 339484193 10934934 complement(2982695..2983621) 1 NC_015731.1 TIGRFAM: Ornithine carbamoyltransferase; HAMAP: Ornithine carbamoyltransferase; KEGG: nit:NAL212_1127 ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; Ornithine carbamoyltransferase 2983621 10934934 Nit79A3_2829 Nitrosomonas sp. Is79A3 Ornithine carbamoyltransferase YP_004695979.1 2982695 R 261292 CDS YP_004695980.1 339484194 10934935 complement(2983669..2984829) 1 NC_015731.1 TIGRFAM: Acetylornithine/succinylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: nit:NAL212_1126 acetylornithine and succinylornithine aminotransferase; PFAM: Aminotransferase class-III; Acetylornithine/succinyldiaminopimelate aminotransferase 2984829 10934935 Nit79A3_2830 Nitrosomonas sp. Is79A3 Acetylornithine/succinyldiaminopimelate aminotransferase YP_004695980.1 2983669 R 261292 CDS YP_004695981.1 339484195 10934936 2985121..2987691 1 NC_015731.1 TIGRFAM: DNA gyrase, subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; KEGG: nit:NAL212_1125 DNA gyrase, A subunit; SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase subunit A 2987691 10934936 Nit79A3_2831 Nitrosomonas sp. Is79A3 DNA gyrase subunit A YP_004695981.1 2985121 D 261292 CDS YP_004695982.1 339484196 10934937 2987749..2988840 1 NC_015731.1 TIGRFAM: Phosphoserine aminotransferase; HAMAP: Phosphoserine aminotransferase; KEGG: nit:NAL212_1124 phosphoserine aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase; Phosphoserine aminotransferase 2988840 10934937 Nit79A3_2832 Nitrosomonas sp. Is79A3 Phosphoserine aminotransferase YP_004695982.1 2987749 D 261292 CDS YP_004695983.1 339484197 10934938 2988833..2990029 1 NC_015731.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; KEGG: nit:NAL212_1123 phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 2990029 10934938 Nit79A3_2833 Nitrosomonas sp. Is79A3 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004695983.1 2988833 D 261292 CDS YP_004695984.1 339484198 10934939 2990077..2991147 1 NC_015731.1 KEGG: nit:NAL212_1122 chorismate mutase; TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT; chorismate mutase 2991147 10934939 Nit79A3_2834 Nitrosomonas sp. Is79A3 chorismate mutase YP_004695984.1 2990077 D 261292 CDS YP_004695985.1 339484199 10934940 2991232..2992350 1 NC_015731.1 TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: nit:NAL212_1121 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/II; Histidinol-phosphate aminotransferase 2992350 10934940 Nit79A3_2835 Nitrosomonas sp. Is79A3 Histidinol-phosphate aminotransferase YP_004695985.1 2991232 D 261292 CDS YP_004695986.1 339484200 10934941 2992347..2993363 1 NC_015731.1 KEGG: nmu:Nmul_A2194 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 2993363 10934941 Nit79A3_2836 Nitrosomonas sp. Is79A3 phospho-2-dehydro-3-deoxyheptonate aldolase YP_004695986.1 2992347 D 261292 CDS YP_004695987.1 339484201 10934942 2993385..2994272 1 NC_015731.1 PFAM: Prephenate dehydrogenase; KEGG: nit:NAL212_1120 prephenate dehydrogenase; Prephenate dehydrogenase 2994272 10934942 Nit79A3_2837 Nitrosomonas sp. Is79A3 Prephenate dehydrogenase YP_004695987.1 2993385 D 261292 CDS YP_004695988.1 339484202 10934943 2994363..2994575 1 NC_015731.1 hypothetical protein 2994575 10934943 Nit79A3_2838 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695988.1 2994363 D 261292 CDS YP_004695989.1 339484203 10934944 2994867..2995664 1 NC_015731.1 KEGG: nit:NAL212_1119 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 2995664 10934944 Nit79A3_2839 Nitrosomonas sp. Is79A3 response regulator receiver protein YP_004695989.1 2994867 D 261292 CDS YP_004695990.1 339484204 10934945 2996096..3000127 1 NC_015731.1 SMART: Diguanylate phosphodiesterase, predicted; MCP methyltransferase, CheR-type; PAC motif; Diguanylate cyclase, predicted; TIGRFAM: Diguanylate cyclase, predicted; PAS; KEGG: nit:NAL212_2095 diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; MCP methyltransferase, CheR-type; PAS fold-3; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3000127 10934945 Nit79A3_2840 Nitrosomonas sp. Is79A3 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004695990.1 2996096 D 261292 CDS YP_004695991.1 339484205 10934946 complement(3000224..3000523) 1 NC_015731.1 KEGG: nit:NAL212_1407 hypothetical protein; hypothetical protein 3000523 10934946 Nit79A3_2841 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695991.1 3000224 R 261292 CDS YP_004695992.1 339484206 10934947 complement(3000639..3001616) 1 NC_015731.1 PFAM: Insertion element protein; KEGG: neu:NE0744 hypothetical protein; Insertion element protein 3001616 10934947 Nit79A3_2842 Nitrosomonas sp. Is79A3 Insertion element protein YP_004695992.1 3000639 R 261292 CDS YP_004695993.1 339484207 10934948 complement(3001869..3002903) 1 NC_015731.1 KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase 3002903 10934948 Nit79A3_2843 Nitrosomonas sp. Is79A3 isxo7 transposase YP_004695993.1 3001869 R 261292 CDS YP_004695994.1 339484208 10934949 3003186..3003539 1 NC_015731.1 PFAM: Sulphur relay, DsrE-like protein; KEGG: nhl:Nhal_2753 DsrE family protein; DsrE family protein 3003539 10934949 Nit79A3_2844 Nitrosomonas sp. Is79A3 DsrE family protein YP_004695994.1 3003186 D 261292 CDS YP_004695995.1 339484209 10934950 3003805..3004584 1 NC_015731.1 KEGG: nmu:Nmul_A0910 hypothetical protein; hypothetical protein 3004584 10934950 Nit79A3_2845 Nitrosomonas sp. Is79A3 hypothetical protein YP_004695995.1 3003805 D 261292 CDS YP_004695996.1 339484210 10934951 3004581..3006053 1 NC_015731.1 PFAM: ATP-grasp fold, RimK-type; KEGG: tbd:Tbd_1453 glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase); RimK domain-containing protein ATP-grasp 3006053 10934951 Nit79A3_2846 Nitrosomonas sp. Is79A3 RimK domain-containing protein ATP-grasp YP_004695996.1 3004581 D 261292 CDS YP_004695997.1 339484211 10934952 3006050..3007300 1 NC_015731.1 PFAM: Glutamate--cysteine ligase, GCS2; KEGG: nmu:Nmul_A0909 glutamate--cysteine ligase, GCS2; glutamate--cysteine ligase GCS2 3007300 10934952 Nit79A3_2847 Nitrosomonas sp. Is79A3 glutamate--cysteine ligase GCS2 YP_004695997.1 3006050 D 261292 CDS YP_004695998.1 339484212 10934953 3007317..3008024 1 NC_015731.1 PFAM: N-formylglutamate amidohydrolase; KEGG: nmu:Nmul_A0908 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 3008024 10934953 Nit79A3_2848 Nitrosomonas sp. Is79A3 N-formylglutamate amidohydrolase YP_004695998.1 3007317 D 261292 CDS YP_004695999.1 339484213 10934954 3008093..3008611 1 NC_015731.1 KEGG: nit:NAL212_1591 methionine-R-sulfoxide reductase; TIGRFAM: Methionine sulphoxide reductase B; PFAM: Methionine sulphoxide reductase B; methionine-R-sulfoxide reductase 3008611 10934954 Nit79A3_2849 Nitrosomonas sp. Is79A3 methionine-R-sulfoxide reductase YP_004695999.1 3008093 D 261292 CDS YP_004696000.1 339484214 10934955 complement(3008642..3009193) 1 NC_015731.1 PFAM: Lipid A 3-O-deacylase-related; KEGG: hdn:Hden_3314 lipid A 3-O-deacylase-related protein; Lipid A 3-O-deacylase-like protein 3009193 10934955 Nit79A3_2850 Nitrosomonas sp. Is79A3 Lipid A 3-O-deacylase-like protein YP_004696000.1 3008642 R 261292 CDS YP_004696001.1 339484215 10934956 complement(3009591..3010361) 1 NC_015731.1 SMART: Toll-Interleukin receptor; KEGG: gca:Galf_1496 TIR protein; TIR protein 3010361 10934956 Nit79A3_2851 Nitrosomonas sp. Is79A3 TIR protein YP_004696001.1 3009591 R 261292 CDS YP_004696002.1 339484216 10934957 complement(3010637..3011176) 1 NC_015731.1 PFAM: SNARE associated Golgi protein; KEGG: ppw:PputW619_5041 hypothetical protein; hypothetical protein 3011176 10934957 Nit79A3_2852 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696002.1 3010637 R 261292 CDS YP_004696003.1 339484217 10934958 complement(3011198..3012547) 1 NC_015731.1 TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: nit:NAL212_0582 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 3012547 10934958 Nit79A3_2853 Nitrosomonas sp. Is79A3 metal dependent phosphohydrolase YP_004696003.1 3011198 R 261292 CDS YP_004696004.1 339484218 10934959 complement(3012647..3013360) 1 NC_015731.1 PFAM: Carbonic anhydrase; KEGG: sku:Sulku_0484 carbonic anhydrase; carbonic anhydrase 3013360 10934959 Nit79A3_2854 Nitrosomonas sp. Is79A3 carbonic anhydrase YP_004696004.1 3012647 R 261292 CDS YP_004696005.1 339484219 10934960 3013662..3014351 1 NC_015731.1 PFAM: Protein of unknown function DUF125, transmembrane; KEGG: nit:NAL212_1328 hypothetical protein; hypothetical protein 3014351 10934960 Nit79A3_2855 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696005.1 3013662 D 261292 CDS YP_004696006.1 339484220 10934961 complement(3014399..3014761) 1 NC_015731.1 KEGG: nit:NAL212_1327 hypothetical protein; hypothetical protein 3014761 10934961 Nit79A3_2856 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696006.1 3014399 R 261292 CDS YP_004696007.1 339484221 10934962 complement(3014843..3015256) 1 NC_015731.1 KEGG: glo:Glov_2674 hypothetical protein; hypothetical protein 3015256 10934962 Nit79A3_2857 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696007.1 3014843 R 261292 CDS YP_004696008.1 339484222 10934963 complement(3015335..3015847) 1 NC_015731.1 PFAM: Domain of unknown function DUF1993; KEGG: nit:NAL212_1326 hypothetical protein; hypothetical protein 3015847 10934963 Nit79A3_2858 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696008.1 3015335 R 261292 CDS YP_004696009.1 339484223 10934964 3016082..3016903 1 NC_015731.1 KEGG: sbp:Sbal223_2521 hypothetical protein; hypothetical protein 3016903 10934964 Nit79A3_2859 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696009.1 3016082 D 261292 CDS YP_004696010.1 339484224 10934965 3016900..3017820 1 NC_015731.1 KEGG: she:Shewmr4_1552 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 3017820 10934965 Nit79A3_2860 Nitrosomonas sp. Is79A3 ABC transporter YP_004696010.1 3016900 D 261292 CDS YP_004696011.1 339484225 10934966 complement(3018013..3019761) 1 NC_015731.1 PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-4; KEGG: nit:NAL212_1928 hypothetical protein; hypothetical protein 3019761 10934966 Nit79A3_2861 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696011.1 3018013 R 261292 CDS YP_004696012.1 339484226 10934967 complement(3019821..3020099) 1 NC_015731.1 KEGG: nit:NAL212_1929 hypothetical protein; hypothetical protein 3020099 10934967 Nit79A3_2862 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696012.1 3019821 R 261292 CDS YP_004696013.1 339484227 10934968 complement(3020302..3020898) 1 NC_015731.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nit:NAL212_1930 transcriptional regulator, TetR family; TetR family transcriptional regulator 3020898 10934968 Nit79A3_2863 Nitrosomonas sp. Is79A3 TetR family transcriptional regulator YP_004696013.1 3020302 R 261292 CDS YP_004696014.1 339484228 10934969 3021140..3022660 1 NC_015731.1 KEGG: cch:Cag_0529 hypothetical protein; hypothetical protein 3022660 10934969 Nit79A3_2864 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696014.1 3021140 D 261292 CDS YP_004696015.1 339484229 10934970 3022876..3024198 1 NC_015731.1 PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; GCN5-related N-acetyltransferase; KEGG: nit:NAL212_2071 hypothetical protein; hypothetical protein 3024198 10934970 Nit79A3_2865 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696015.1 3022876 D 261292 CDS YP_004696016.1 339484230 10934971 3024535..3025047 1 NC_015731.1 KEGG: nit:NAL212_1933 hypothetical protein; hypothetical protein 3025047 10934971 Nit79A3_2866 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696016.1 3024535 D 261292 CDS YP_004696017.1 339484231 10934972 3025056..3025625 1 NC_015731.1 KEGG: net:Neut_1937 hypothetical protein; hypothetical protein 3025625 10934972 Nit79A3_2867 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696017.1 3025056 D 261292 CDS YP_004696018.1 339484232 10934973 3025807..3027036 1 NC_015731.1 KEGG: nit:NAL212_1934 response regulator receiver modulated diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region; SMART: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate phosphodiesterase 3027036 10934973 Nit79A3_2868 Nitrosomonas sp. Is79A3 response regulator receiver modulated diguanylate phosphodiesterase YP_004696018.1 3025807 D 261292 CDS YP_004696019.1 339484233 10934974 complement(3027081..3030824) 1 NC_015731.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; PAS fold; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: nit:NAL212_1379 multi-sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; PAS; Signal transduction response regulator, receiver region; multi-sensor hybrid histidine kinase 3030824 10934974 Nit79A3_2869 Nitrosomonas sp. Is79A3 multi-sensor hybrid histidine kinase YP_004696019.1 3027081 R 261292 CDS YP_004696020.1 339484234 10934975 3031199..3032506 1 NC_015731.1 KEGG: nit:NAL212_1380 hypothetical protein; hypothetical protein 3032506 10934975 Nit79A3_2870 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696020.1 3031199 D 261292 CDS YP_004696021.1 339484235 10934976 3032503..3033948 1 NC_015731.1 KEGG: nit:NAL212_1381 undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; UDP-phosphate glucose phosphotransferase 3033948 10934976 Nit79A3_2871 Nitrosomonas sp. Is79A3 UDP-phosphate glucose phosphotransferase YP_004696021.1 3032503 D 261292 CDS YP_004696022.1 339484236 10934977 complement(3033972..3034652) 1 NC_015731.1 PFAM: Phospholipase/carboxylesterase; KEGG: nit:NAL212_1574 carboxylesterase; phospholipase/Carboxylesterase 3034652 10934977 Nit79A3_2872 Nitrosomonas sp. Is79A3 phospholipase/Carboxylesterase YP_004696022.1 3033972 R 261292 CDS YP_004696023.1 339484237 10934978 3034737..3035855 1 NC_015731.1 KEGG: nit:NAL212_1573 transglutaminase domain-containing protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like; transglutaminase domain-containing protein 3035855 10934978 Nit79A3_2873 Nitrosomonas sp. Is79A3 transglutaminase domain-containing protein YP_004696023.1 3034737 D 261292 CDS YP_004696024.1 339484238 10934979 3036377..3038212 1 NC_015731.1 KEGG: nit:NAL212_1569 TonB-dependent vitamin B12 receptor; TIGRFAM: TonB-dependent vitamin B12 receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; TonB-dependent vitamin B12 receptor 3038212 10934979 Nit79A3_2874 Nitrosomonas sp. Is79A3 TonB-dependent vitamin B12 receptor YP_004696024.1 3036377 D 261292 CDS YP_004696025.1 339484239 10934980 3038226..3038810 1 NC_015731.1 KEGG: nit:NAL212_1568 hypothetical protein; hypothetical protein 3038810 10934980 Nit79A3_2875 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696025.1 3038226 D 261292 CDS YP_004696026.1 339484240 10934981 3038815..3039420 1 NC_015731.1 KEGG: nit:NAL212_1567 cob(I)alamin adenosyltransferase; TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; cob(I)alamin adenosyltransferase 3039420 10934981 Nit79A3_2876 Nitrosomonas sp. Is79A3 cob(I)alamin adenosyltransferase YP_004696026.1 3038815 D 261292 CDS YP_004696027.1 339484241 10934982 3039425..3040906 1 NC_015731.1 TIGRFAM: Cobyric acid synthase CobQ; HAMAP: Cobyric acid synthase CobQ; KEGG: pst:PSPTO_1713 cobyric acid synthase; PFAM: CobB/CobQ-like glutamine amidotransferase; Cobyrinic acid a,c-diamide synthase; Cobyric acid synthase 3040906 10934982 Nit79A3_2877 Nitrosomonas sp. Is79A3 Cobyric acid synthase YP_004696027.1 3039425 D 261292 CDS YP_004696028.1 339484242 10934983 3040903..3041433 1 NC_015731.1 PFAM: Cobinamide kinase/cobinamide phosphate guanyltransferase; KEGG: pae:PA1278 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; cobalbumin biosynthesis protein 3041433 10934983 Nit79A3_2878 Nitrosomonas sp. Is79A3 cobalbumin biosynthesis protein YP_004696028.1 3040903 D 261292 CDS YP_004696029.1 339484243 10934984 3041430..3042494 1 NC_015731.1 TIGRFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, core, prokaryotic; HAMAP: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, core, prokaryotic; KEGG: tkm:TK90_1454 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like, core; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3042494 10934984 Nit79A3_2879 Nitrosomonas sp. Is79A3 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_004696029.1 3041430 D 261292 CDS YP_004696030.1 339484244 10934985 3042508..3043104 1 NC_015731.1 PFAM: Phosphoglycerate mutase; KEGG: psa:PST_1300 alpha-ribazole-5'-phosphate phosphatase; Phosphoglycerate mutase 3043104 10934985 Nit79A3_2880 Nitrosomonas sp. Is79A3 Phosphoglycerate mutase YP_004696030.1 3042508 D 261292 CDS YP_004696031.1 339484245 10934986 3043101..3043877 1 NC_015731.1 TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; HAMAP: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; KEGG: acd:AOLE_10485 cobalamin 5'-phosphate synthase; PFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; Cobalamin synthase 3043877 10934986 Nit79A3_2881 Nitrosomonas sp. Is79A3 Cobalamin synthase YP_004696031.1 3043101 D 261292 CDS YP_004696032.1 339484246 10934987 complement(3044569..3045150) 1 NC_015731.1 KEGG: nit:NAL212_2602 hypothetical protein; hypothetical protein 3045150 10934987 Nit79A3_2882 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696032.1 3044569 R 261292 CDS YP_004696033.1 339484247 10934988 complement(3045217..3045801) 1 NC_015731.1 KEGG: nit:NAL212_2603 hypothetical protein; hypothetical protein 3045801 10934988 Nit79A3_2883 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696033.1 3045217 R 261292 CDS YP_004696034.1 339484248 10934989 complement(3045971..3047233) 1 NC_015731.1 KEGG: nit:NAL212_2604 methane monooxygenase/ammonia monooxygenase, subunit B; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; methane monooxygenase/ammonia monooxygenase subunit B 3047233 10934989 Nit79A3_2884 Nitrosomonas sp. Is79A3 methane monooxygenase/ammonia monooxygenase subunit B YP_004696034.1 3045971 R 261292 CDS YP_004696035.1 339484249 10934990 complement(3047233..3048057) 1 NC_015731.1 KEGG: nit:NAL212_2605 methane monooxygenase/ammonia monooxygenase, subunit A; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; methane monooxygenase/ammonia monooxygenase subunit A 3048057 10934990 Nit79A3_2885 Nitrosomonas sp. Is79A3 methane monooxygenase/ammonia monooxygenase subunit A YP_004696035.1 3047233 R 261292 CDS YP_004696036.1 339484250 10934991 complement(3048238..3049047) 1 NC_015731.1 KEGG: nit:NAL212_2606 methane monooxygenase/ammonia monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; methane monooxygenase/ammonia monooxygenase subunit C 3049047 10934991 Nit79A3_2886 Nitrosomonas sp. Is79A3 methane monooxygenase/ammonia monooxygenase subunit C YP_004696036.1 3048238 R 261292 CDS YP_004696037.1 339484251 10934992 complement(3049539..3050072) 1 NC_015731.1 hypothetical protein 3050072 10934992 Nit79A3_2887 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696037.1 3049539 R 261292 CDS YP_004696038.1 339484252 10934993 3050237..3051403 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: dar:Daro_2223 transposase IS4; transposase IS4 family protein 3051403 10934993 Nit79A3_2888 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004696038.1 3050237 D 261292 CDS YP_004696039.1 339484253 10934994 complement(3051396..3052118) 1 NC_015731.1 PFAM: Peptidase M10A/M12B, matrixin/adamalysin; peptidase M10A and M12B matrixin and adamalysin 3052118 10934994 Nit79A3_2889 Nitrosomonas sp. Is79A3 peptidase M10A and M12B matrixin and adamalysin YP_004696039.1 3051396 R 261292 CDS YP_004696040.1 339484254 10934995 3052314..3053618 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 3053618 10934995 Nit79A3_2890 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004696040.1 3052314 D 261292 CDS YP_004696041.1 339484255 10934996 complement(3053785..3055029) 1 NC_015731.1 KEGG: nit:NAL212_2010 hypothetical protein; TIGRFAM: HI0933-like protein; PFAM: HI0933-like protein; hypothetical protein 3055029 10934996 Nit79A3_2891 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696041.1 3053785 R 261292 CDS YP_004696042.1 339484256 10934997 complement(3055057..3055245) 1 NC_015731.1 manually curated; KEGG: nit:NAL212_2009 transmembrane protein; transmembrane protein 3055245 10934997 Nit79A3_2892 Nitrosomonas sp. Is79A3 transmembrane protein YP_004696042.1 3055057 R 261292 CDS YP_004696043.1 339484257 10934998 3055404..3056366 1 NC_015731.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA dimethylallyltransferase; KEGG: nit:NAL212_2008 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA dimethylallyltransferase 3056366 10934998 Nit79A3_2893 Nitrosomonas sp. Is79A3 tRNA dimethylallyltransferase YP_004696043.1 3055404 D 261292 CDS YP_004696044.1 339484258 10934999 3056563..3056898 1 NC_015731.1 PFAM: Transport-associated; KEGG: nit:NAL212_2007 transport-associated protein; transport-associated protein 3056898 10934999 Nit79A3_2894 Nitrosomonas sp. Is79A3 transport-associated protein YP_004696044.1 3056563 D 261292 CDS YP_004696045.1 339484259 10935000 complement(3056968..3057789) 1 NC_015731.1 KEGG: nit:NAL212_2006 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; HAMAP: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 3057789 10935000 Nit79A3_2895 Nitrosomonas sp. Is79A3 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_004696045.1 3056968 R 261292 CDS YP_004696046.1 339484260 10935001 complement(3057812..3059008) 1 NC_015731.1 KEGG: nit:NAL212_2005 succinyldiaminopimelate transaminase; TIGRFAM: Succinyldiaminopimelate transaminase, beta/gammaproteobacteria; PFAM: Aminotransferase, class I/II; succinyldiaminopimelate transaminase 3059008 10935001 Nit79A3_2896 Nitrosomonas sp. Is79A3 succinyldiaminopimelate transaminase YP_004696046.1 3057812 R 261292 CDS YP_004696047.1 339484261 10935002 complement(3059196..3061217) 1 NC_015731.1 PFAM: Copper resistance D; Cytochrome c, class I; KEGG: nit:NAL212_1916 copper resistance D domain-containing protein; copper resistance D domain-containing protein 3061217 10935002 Nit79A3_2897 Nitrosomonas sp. Is79A3 copper resistance D domain-containing protein YP_004696047.1 3059196 R 261292 CDS YP_004696048.1 339484262 10935003 complement(3061424..3062296) 1 NC_015731.1 PFAM: Protein of unknown function DUF519; KEGG: gca:Galf_1543 hypothetical protein; hypothetical protein 3062296 10935003 Nit79A3_2898 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696048.1 3061424 R 261292 CDS YP_004696049.1 339484263 10935004 3062507..3063205 1 NC_015731.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nit:NAL212_1708 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3063205 10935004 Nit79A3_2899 Nitrosomonas sp. Is79A3 short-chain dehydrogenase/reductase SDR YP_004696049.1 3062507 D 261292 CDS YP_004696050.1 339484264 10935005 3063314..3063757 1 NC_015731.1 KEGG: vei:Veis_3132 hypothetical protein; hypothetical protein 3063757 10935005 Nit79A3_2900 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696050.1 3063314 D 261292 CDS YP_004696051.1 339484265 10935006 3063754..3064515 1 NC_015731.1 PFAM: Domain of unknown function DUF1829; Domain of unknown function DUF1828; KEGG: vei:Veis_3133 Lj965 prophage protein; hypothetical protein 3064515 10935006 Nit79A3_2901 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696051.1 3063754 D 261292 CDS YP_004696052.1 339484266 10935007 complement(3064664..3065113) 1 NC_015731.1 KEGG: nit:NAL212_1540 hypothetical protein; hypothetical protein 3065113 10935007 Nit79A3_2902 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696052.1 3064664 R 261292 CDS YP_004696053.1 339484267 10935008 complement(3065235..3065735) 1 NC_015731.1 KEGG: nmu:Nmul_A0896 hypothetical protein; hypothetical protein 3065735 10935008 Nit79A3_2903 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696053.1 3065235 R 261292 CDS YP_004696054.1 339484268 10935009 complement(3065781..3066425) 1 NC_015731.1 PFAM: Phosphoribosyltransferase; KEGG: nmu:Nmul_A0900 phosphoribosyltransferase; phosphoribosyltransferase 3066425 10935009 Nit79A3_2904 Nitrosomonas sp. Is79A3 phosphoribosyltransferase YP_004696054.1 3065781 R 261292 CDS YP_004696055.1 339484269 10935010 complement(3066444..3068177) 1 NC_015731.1 KEGG: nmu:Nmul_A0901 PHP-like; PFAM: PHP, C-terminal; SMART: DNA-directed DNA polymerase, family X; Helix-hairpin-helix DNA-binding motif, class 1; Polymerase/histidinol phosphatase, N-terminal; PHP domain-containing protein 3068177 10935010 Nit79A3_2905 Nitrosomonas sp. Is79A3 PHP domain-containing protein YP_004696055.1 3066444 R 261292 CDS YP_004696056.1 339484270 10935011 3068313..3068720 1 NC_015731.1 PFAM: Archease, tRNA m5C methyltransferase chaperone; KEGG: nmu:Nmul_A0902 hypothetical protein; hypothetical protein 3068720 10935011 Nit79A3_2906 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696056.1 3068313 D 261292 CDS YP_004696057.1 339484271 10935012 3068717..3070144 1 NC_015731.1 PFAM: Uncharacterised protein family UPF0027; KEGG: nmu:Nmul_A0903 hypothetical protein; hypothetical protein 3070144 10935012 Nit79A3_2907 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696057.1 3068717 D 261292 CDS YP_004696058.1 339484272 10935013 3070191..3070751 1 NC_015731.1 KEGG: nmu:Nmul_A0905 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Cold-shock protein, DNA-binding; ribosomal subunit interface protein 3070751 10935013 Nit79A3_2908 Nitrosomonas sp. Is79A3 ribosomal subunit interface protein YP_004696058.1 3070191 D 261292 CDS YP_004696059.1 339484273 10935014 3070787..3071371 1 NC_015731.1 KEGG: rfr:Rfer_0828 isochorismatase hydrolase; manually curated; PFAM: Isochorismatase-like; isochorismatase hydrolase 3071371 10935014 Nit79A3_2909 Nitrosomonas sp. Is79A3 isochorismatase hydrolase YP_004696059.1 3070787 D 261292 CDS YP_004696060.1 339484274 10935015 3071368..3072726 1 NC_015731.1 KEGG: nmu:Nmul_A0907 nicotinate phosphoribosyltransferase; TIGRFAM: Nicotinate phosphoribosyltransferase PFAM: Nicotinate phosphoribosyltransferase-like; nicotinate phosphoribosyltransferase 3072726 10935015 Nit79A3_2910 Nitrosomonas sp. Is79A3 nicotinate phosphoribosyltransferase YP_004696060.1 3071368 D 261292 CDS YP_004696061.1 339484275 10935016 complement(3072831..3076091) 1 NC_015731.1 PFAM: Haemolysin-type calcium-binding region; KEGG: azl:AZL_a06050 rhizobiocin/RTX toxin and hemolysin-type calcium binding protein; Hemolysin-type calcium-binding protein 3076091 10935016 Nit79A3_2911 Nitrosomonas sp. Is79A3 Hemolysin-type calcium-binding protein YP_004696061.1 3072831 R 261292 CDS YP_004696062.1 339484276 10935017 3076571..3077074 1 NC_015731.1 KEGG: nmu:Nmul_A1168 hypothetical protein; hypothetical protein 3077074 10935017 Nit79A3_2912 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696062.1 3076571 D 261292 CDS YP_004696063.1 339484277 10935018 3077240..3077689 1 NC_015731.1 KEGG: nit:NAL212_1539 signal transduction protein with CBS domains; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; signal transduction protein with CBS domains 3077689 10935018 Nit79A3_2913 Nitrosomonas sp. Is79A3 signal transduction protein with CBS domains YP_004696063.1 3077240 D 261292 CDS YP_004696064.1 339484278 10935019 3077842..3080217 1 NC_015731.1 TIGRFAM: Peptidase S16, ATP-dependent protease La; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core; KEGG: neu:NE1278 ATP-dependent proteinase La 1 (lon) (class III heat-shock protein); SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; anti-sigma H sporulation factor, LonB 3080217 10935019 Nit79A3_2914 Nitrosomonas sp. Is79A3 anti-sigma H sporulation factor, LonB YP_004696064.1 3077842 D 261292 CDS YP_004696065.1 339484279 10935020 3080607..3080951 1 NC_015731.1 KEGG: nit:NAL212_1538 hypothetical protein; hypothetical protein 3080951 10935020 Nit79A3_2915 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696065.1 3080607 D 261292 CDS YP_004696066.1 339484280 10935021 3081051..3081524 1 NC_015731.1 KEGG: nit:NAL212_2723 disulfide bond formation protein DsbB; HAMAP: Disulfide bond formation protein B; PFAM: Disulphide bond formation protein DsbB; Disulfide bond formation protein B 3081524 10935021 Nit79A3_2916 Nitrosomonas sp. Is79A3 Disulfide bond formation protein B YP_004696066.1 3081051 D 261292 CDS YP_004696067.1 339484281 10935022 complement(3081535..3082446) 1 NC_015731.1 TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerD; KEGG: nit:NAL212_2724 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; Tyrosine recombinase xerD 3082446 10935022 Nit79A3_2917 Nitrosomonas sp. Is79A3 Tyrosine recombinase xerD YP_004696067.1 3081535 R 261292 CDS YP_004696068.1 339484282 10935023 complement(3082433..3082936) 1 NC_015731.1 KEGG: nit:NAL212_2725 methylated-DNA/protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; methylated-DNA/protein-cysteine methyltransferase 3082936 10935023 Nit79A3_2918 Nitrosomonas sp. Is79A3 methylated-DNA/protein-cysteine methyltransferase YP_004696068.1 3082433 R 261292 CDS YP_004696069.1 339484283 10935024 complement(3083096..3085006) 1 NC_015731.1 HAMAP: Chaperone protein htpG; PFAM: Heat shock protein Hsp90, C-terminal; ATP-binding region, ATPase-like; KEGG: nmu:Nmul_A1109 heat shock protein 90; SMART: ATP-binding region, ATPase-like; Chaperone protein htpG 3085006 10935024 Nit79A3_2919 Nitrosomonas sp. Is79A3 Chaperone protein htpG YP_004696069.1 3083096 R 261292 CDS YP_004696070.1 339484284 10935025 complement(3085248..3086693) 1 NC_015731.1 TIGRFAM: NADH-quinone oxidoreductase, chain N; HAMAP: NAD(P)H-quinone oxidoreductase subunit 2; KEGG: nit:NAL212_2728 proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NAD(P)H-quinone oxidoreductase subunit 2 3086693 10935025 Nit79A3_2920 Nitrosomonas sp. Is79A3 NAD(P)H-quinone oxidoreductase subunit 2 YP_004696070.1 3085248 R 261292 CDS YP_004696071.1 339484285 10935026 complement(3086744..3088228) 1 NC_015731.1 KEGG: nit:NAL212_2729 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase, chain M 3088228 10935026 Nit79A3_2921 Nitrosomonas sp. Is79A3 proton-translocating NADH-quinone oxidoreductase, chain M YP_004696071.1 3086744 R 261292 CDS YP_004696072.1 339484286 10935027 complement(3088321..3090261) 1 NC_015731.1 KEGG: nit:NAL212_2730 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; proton-translocating NADH-quinone oxidoreductase, chain L 3090261 10935027 Nit79A3_2922 Nitrosomonas sp. Is79A3 proton-translocating NADH-quinone oxidoreductase, chain L YP_004696072.1 3088321 R 261292 CDS YP_004696073.1 339484287 10935028 complement(3090321..3090626) 1 NC_015731.1 KEGG: nit:NAL212_2731 NAD(P)H-quinone oxidoreductase subunit 4L; HAMAP: NAD(P)H-quinone oxidoreductase subunit 4L; PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; NAD(P)H-quinone oxidoreductase subunit 4L 3090626 10935028 Nit79A3_2923 Nitrosomonas sp. Is79A3 NAD(P)H-quinone oxidoreductase subunit 4L YP_004696073.1 3090321 R 261292 CDS YP_004696074.1 339484288 10935029 complement(3090682..3091287) 1 NC_015731.1 PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: nit:NAL212_2732 NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 3091287 10935029 Nit79A3_2924 Nitrosomonas sp. Is79A3 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_004696074.1 3090682 R 261292 CDS YP_004696075.1 339484289 10935030 complement(3091307..3091795) 1 NC_015731.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; HAMAP: NADH-quinone oxidoreductase, chain I; KEGG: nit:NAL212_2733 NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; NAD(P)H-quinone oxidoreductase subunit I 3091795 10935030 Nit79A3_2925 Nitrosomonas sp. Is79A3 NAD(P)H-quinone oxidoreductase subunit I YP_004696075.1 3091307 R 261292 CDS YP_004696076.1 339484290 10935031 complement(3091811..3092908) 1 NC_015731.1 KEGG: nit:NAL212_2734 NADH dehydrogenase (quinone); HAMAP: NAD(P)H-quinone oxidoreductase subunit 1; PFAM: NADH:ubiquinone oxidoreductase, subunit 1; NAD(P)H-quinone oxidoreductase subunit 1 3092908 10935031 Nit79A3_2926 Nitrosomonas sp. Is79A3 NAD(P)H-quinone oxidoreductase subunit 1 YP_004696076.1 3091811 R 261292 CDS YP_004696077.1 339484291 10935032 complement(3092931..3095342) 1 NC_015731.1 KEGG: nit:NAL212_2735 NADH-quinone oxidoreductase, chain G; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; Molybdopterin oxidoreductase; NADH-quinone oxidoreductase, chain G 3095342 10935032 Nit79A3_2927 Nitrosomonas sp. Is79A3 NADH-quinone oxidoreductase, chain G YP_004696077.1 3092931 R 261292 CDS YP_004696078.1 339484292 10935033 complement(3095412..3096689) 1 NC_015731.1 KEGG: nit:NAL212_2736 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH ubiquinone oxidoreductase, F subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH-quinone oxidoreductase subunit F 3096689 10935033 Nit79A3_2928 Nitrosomonas sp. Is79A3 NADH-quinone oxidoreductase subunit F YP_004696078.1 3095412 R 261292 CDS YP_004696079.1 339484293 10935034 complement(3096686..3097162) 1 NC_015731.1 KEGG: nit:NAL212_2737 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; NADH-quinone oxidoreductase subunit E 3097162 10935034 Nit79A3_2929 Nitrosomonas sp. Is79A3 NADH-quinone oxidoreductase subunit E YP_004696079.1 3096686 R 261292 CDS YP_004696080.1 339484294 10935035 complement(3097169..3098422) 1 NC_015731.1 TIGRFAM: NADH dehydrogenase I, D subunit; HAMAP: NAD(P)H-quinone oxidoreductase subunit H; KEGG: nit:NAL212_2738 NADH dehydrogenase I, D subunit; PFAM: NADH-quinone oxidoreductase, subunit D; NAD(P)H-quinone oxidoreductase subunit H 3098422 10935035 Nit79A3_2930 Nitrosomonas sp. Is79A3 NAD(P)H-quinone oxidoreductase subunit H YP_004696080.1 3097169 R 261292 CDS YP_004696081.1 339484295 10935036 complement(3098483..3099103) 1 NC_015731.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; HAMAP: NAD(P)H-quinone oxidoreductase subunit J; KEGG: nit:NAL212_2739 NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit; NAD(P)H-quinone oxidoreductase subunit J 3099103 10935036 Nit79A3_2931 Nitrosomonas sp. Is79A3 NAD(P)H-quinone oxidoreductase subunit J YP_004696081.1 3098483 R 261292 CDS YP_004696082.1 339484296 10935037 complement(3099109..3099585) 1 NC_015731.1 TIGRFAM: NADH:ubiquinone oxidoreductase, 20kDa subunit; HAMAP: NAD(P)H-quinone oxidoreductase subunit K; KEGG: nit:NAL212_2740 NADH-quinone oxidoreductase, B subunit; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; NAD(P)H-quinone oxidoreductase subunit K 3099585 10935037 Nit79A3_2932 Nitrosomonas sp. Is79A3 NAD(P)H-quinone oxidoreductase subunit K YP_004696082.1 3099109 R 261292 CDS YP_004696083.1 339484297 10935038 complement(3099590..3099946) 1 NC_015731.1 KEGG: nit:NAL212_2741 NAD(P)H-quinone oxidoreductase subunit 3; HAMAP: NAD(P)H-quinone oxidoreductase subunit 3; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3; NAD(P)H-quinone oxidoreductase subunit 3 3099946 10935038 Nit79A3_2933 Nitrosomonas sp. Is79A3 NAD(P)H-quinone oxidoreductase subunit 3 YP_004696083.1 3099590 R 261292 CDS YP_004696084.1 339484298 10935040 complement(3100166..3100549) 1 NC_015731.1 KEGG: nmu:Nmul_A1090 preprotein translocase subunit SecG; TIGRFAM: Preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG 3100549 10935040 Nit79A3_2934 Nitrosomonas sp. Is79A3 preprotein translocase subunit SecG YP_004696084.1 3100166 R 261292 CDS YP_004696085.1 339484299 10935041 complement(3100568..3101323) 1 NC_015731.1 KEGG: nit:NAL212_2743 triosephosphate isomerase; TIGRFAM: Triosephosphate isomerase; PFAM: Triosephosphate isomerase; triosephosphate isomerase 3101323 10935041 Nit79A3_2935 Nitrosomonas sp. Is79A3 triosephosphate isomerase YP_004696085.1 3100568 R 261292 CDS YP_004696086.1 339484300 10935042 complement(3101578..3102432) 1 NC_015731.1 TIGRFAM: Phosphate transport system permease 1; PFAM: ABC transporter-like; KEGG: nit:NAL212_2744 phosphate ABC transporter, ATPase subunit; SMART: ATPase, AAA+ type, core; phosphate ABC transporter ATPase 3102432 10935042 Nit79A3_2936 Nitrosomonas sp. Is79A3 phosphate ABC transporter ATPase YP_004696086.1 3101578 R 261292 CDS YP_004696087.1 339484301 10935043 complement(3102380..3103306) 1 NC_015731.1 KEGG: nit:NAL212_2745 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease 2; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 3103306 10935043 Nit79A3_2937 Nitrosomonas sp. Is79A3 phosphate ABC transporter permease YP_004696087.1 3102380 R 261292 CDS YP_004696088.1 339484302 10935044 complement(3103399..3104331) 1 NC_015731.1 KEGG: nit:NAL212_2746 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: Phosphate ABC transporter, permease PstC; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 3104331 10935044 Nit79A3_2938 Nitrosomonas sp. Is79A3 phosphate ABC transporter permease YP_004696088.1 3103399 R 261292 CDS YP_004696089.1 339484303 10935045 complement(3104628..3105302) 1 NC_015731.1 PFAM: NapC/NirT cytochrome c, N-terminal; KEGG: nit:NAL212_2747 NapC/NirT cytochrome c domain-containing protein; NapC/NirT cytochrome c domain-containing protein 3105302 10935045 Nit79A3_2939 Nitrosomonas sp. Is79A3 NapC/NirT cytochrome c domain-containing protein YP_004696089.1 3104628 R 261292 CDS YP_004696090.1 339484304 10935046 complement(3105302..3106021) 1 NC_015731.1 KEGG: nit:NAL212_2748 cytochrome c-554; cytochrome c-554 3106021 10935046 Nit79A3_2940 Nitrosomonas sp. Is79A3 cytochrome c-554 YP_004696090.1 3105302 R 261292 CDS YP_004696091.1 339484305 10935047 complement(3106181..3107215) 1 NC_015731.1 KEGG: nit:NAL212_2749 hypothetical protein; hypothetical protein 3107215 10935047 Nit79A3_2941 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696091.1 3106181 R 261292 CDS YP_004696092.1 339484306 10935048 complement(3107212..3108924) 1 NC_015731.1 KEGG: nit:NAL212_2750 hydroxylamine oxidase; hydroxylamine oxidase 3108924 10935048 Nit79A3_2942 Nitrosomonas sp. Is79A3 hydroxylamine oxidase YP_004696092.1 3107212 R 261292 CDS YP_004696093.1 339484307 10935049 complement(3109107..3109877) 1 NC_015731.1 KEGG: nit:NAL212_2751 hypothetical protein; hypothetical protein 3109877 10935049 Nit79A3_2943 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696093.1 3109107 R 261292 CDS YP_004696094.1 339484308 10935050 complement(3110183..3111433) 1 NC_015731.1 PFAM: Cysteine-rich region, CCG; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: nit:NAL212_2158 hypothetical protein; hypothetical protein 3111433 10935050 Nit79A3_2944 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696094.1 3110183 R 261292 CDS YP_004696095.1 339484309 10935051 complement(3111434..3112507) 1 NC_015731.1 PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; KEGG: nit:NAL212_2159 FAD linked oxidase domain-containing protein; FAD linked oxidase domain-containing protein 3112507 10935051 Nit79A3_2945 Nitrosomonas sp. Is79A3 FAD linked oxidase domain-containing protein YP_004696095.1 3111434 R 261292 CDS YP_004696096.1 339484310 10935052 complement(3112513..3113967) 1 NC_015731.1 PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; KEGG: nit:NAL212_2160 D-lactate dehydrogenase (cytochrome); FAD linked oxidase domain-containing protein 3113967 10935052 Nit79A3_2946 Nitrosomonas sp. Is79A3 FAD linked oxidase domain-containing protein YP_004696096.1 3112513 R 261292 CDS YP_004696097.1 339484311 10935053 complement(3113972..3114877) 1 NC_015731.1 KEGG: nit:NAL212_2161 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 2-hydroxy-3-oxopropionate reductase 3114877 10935053 Nit79A3_2947 Nitrosomonas sp. Is79A3 2-hydroxy-3-oxopropionate reductase YP_004696097.1 3113972 R 261292 CDS YP_004696098.1 339484312 10935054 complement(3114959..3115879) 1 NC_015731.1 PFAM: Bile acid:sodium symporter; KEGG: nit:NAL212_2211 bile acid:sodium symporter; Bile acid:sodium symporter 3115879 10935054 Nit79A3_2948 Nitrosomonas sp. Is79A3 Bile acid:sodium symporter YP_004696098.1 3114959 R 261292 CDS YP_004696099.1 339484313 10935055 complement(3115905..3116618) 1 NC_015731.1 PFAM: Methyltransferase type 12; KEGG: nmu:Nmul_A1634 hypothetical protein; type 12 methyltransferase 3116618 10935055 Nit79A3_2949 Nitrosomonas sp. Is79A3 type 12 methyltransferase YP_004696099.1 3115905 R 261292 CDS YP_004696100.1 339484314 10935056 complement(3116796..3117806) 1 NC_015731.1 KEGG: npu:Npun_DR029 lipoprotein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; SMP-30/Gluconolaconase/LRE-like region; PEP motif anchor domain-containing protein 3117806 10935056 Nit79A3_2950 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004696100.1 3116796 R 261292 CDS YP_004696101.1 339484315 10935057 complement(3117906..3118652) 1 NC_015731.1 KEGG: psl:Psta_3067 autotransporter-associated beta strand repeat-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 3118652 10935057 Nit79A3_2951 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004696101.1 3117906 R 261292 CDS YP_004696102.1 339484316 10935058 complement(3118731..3119255) 1 NC_015731.1 KEGG: nit:NAL212_0962 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; C-type lectin; PEP motif anchor domain-containing protein 3119255 10935058 Nit79A3_2952 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004696102.1 3118731 R 261292 CDS YP_004696103.1 339484317 10935059 3119399..3120565 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: dar:Daro_2223 transposase IS4; transposase IS4 family protein 3120565 10935059 Nit79A3_2953 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004696103.1 3119399 D 261292 CDS YP_004696104.1 339484318 10935060 3121124..3122311 1 NC_015731.1 KEGG: nit:NAL212_2858 ErfK/YbiS/YcfS/YnhG family protein; PFAM: YkuD domain; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; ErfK/YbiS/YcfS/YnhG family protein 3122311 10935060 Nit79A3_2954 Nitrosomonas sp. Is79A3 ErfK/YbiS/YcfS/YnhG family protein YP_004696104.1 3121124 D 261292 CDS YP_004696105.1 339484319 10935061 complement(3122358..3123281) 1 NC_015731.1 KEGG: gsu:GSU1898 hypothetical protein; hypothetical protein 3123281 10935061 Nit79A3_2955 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696105.1 3122358 R 261292 CDS YP_004696106.1 339484320 10935062 complement(3123420..3124277) 1 NC_015731.1 KEGG: gur:Gura_1727 hypothetical protein; hypothetical protein 3124277 10935062 Nit79A3_2956 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696106.1 3123420 R 261292 CDS YP_004696107.1 339484321 10935063 3124541..3125035 1 NC_015731.1 hypothetical protein 3125035 10935063 Nit79A3_2957 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696107.1 3124541 D 261292 CDS YP_004696108.1 339484322 10935064 3125115..3126089 1 NC_015731.1 PFAM: Peptidase T2, asparaginase 2; KEGG: nit:NAL212_2859 beta-aspartyl-peptidase; peptidase T2 asparaginase 2 3126089 10935064 Nit79A3_2958 Nitrosomonas sp. Is79A3 peptidase T2 asparaginase 2 YP_004696108.1 3125115 D 261292 CDS YP_004696109.1 339484323 10935065 complement(3126114..3127955) 1 NC_015731.1 KEGG: rmr:Rmar_0342 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 3127955 10935065 Nit79A3_2959 Nitrosomonas sp. Is79A3 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent YP_004696109.1 3126114 R 261292 CDS YP_004696110.1 339484324 10935066 3128093..3128332 1 NC_015731.1 KEGG: rva:Rvan_1424 histone H1; histone H1 3128332 10935066 Nit79A3_2960 Nitrosomonas sp. Is79A3 histone H1 YP_004696110.1 3128093 D 261292 CDS YP_004696111.1 339484325 10935067 complement(3128315..3129316) 1 NC_015731.1 PFAM: Domain of unknown function P63C; KEGG: adn:Alide_4388 hypothetical protein; hypothetical protein 3129316 10935067 Nit79A3_2961 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696111.1 3128315 R 261292 CDS YP_004696112.1 339484326 10935069 complement(3130363..3130701) 1 NC_015731.1 hypothetical protein 3130701 10935069 Nit79A3_2963 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696112.1 3130363 R 261292 CDS YP_004696113.1 339484327 10935070 complement(3130698..3130964) 1 NC_015731.1 hypothetical protein 3130964 10935070 Nit79A3_2964 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696113.1 3130698 R 261292 CDS YP_004696114.1 339484328 10935071 3131248..3132066 1 NC_015731.1 KEGG: aeh:Mlg_0098 PEP motif-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 3132066 10935071 Nit79A3_2965 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004696114.1 3131248 D 261292 CDS YP_004696115.1 339484329 10935072 3132224..3133042 1 NC_015731.1 KEGG: nit:NAL212_2860 polyphosphate:nucleotide phosphotransferase, PPK2 family; TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; PFAM: Polyphosphate kinase 2; polyphosphate:nucleotide phosphotransferase, PPK2 family 3133042 10935072 Nit79A3_2966 Nitrosomonas sp. Is79A3 polyphosphate:nucleotide phosphotransferase, PPK2 family YP_004696115.1 3132224 D 261292 CDS YP_004696116.1 339484330 10935073 3133095..3134585 1 NC_015731.1 PFAM: CHAD; Adenylate cyclase; KEGG: nit:NAL212_2861 CHAD domain containing protein; CHAD domain containing protein 3134585 10935073 Nit79A3_2967 Nitrosomonas sp. Is79A3 CHAD domain containing protein YP_004696116.1 3133095 D 261292 CDS YP_004696117.1 339484331 10935075 complement(3135674..3136603) 1 NC_015731.1 KEGG: nit:NAL212_2862 E3 ubiquitin ligase; E3 ubiquitin ligase 3136603 10935075 Nit79A3_2970 Nitrosomonas sp. Is79A3 E3 ubiquitin ligase YP_004696117.1 3135674 R 261292 CDS YP_004696118.1 339484332 10935076 complement(3136618..3137190) 1 NC_015731.1 PFAM: LemA; KEGG: nit:NAL212_2863 LemA family protein; LemA family protein 3137190 10935076 Nit79A3_2971 Nitrosomonas sp. Is79A3 LemA family protein YP_004696118.1 3136618 R 261292 CDS YP_004696119.1 339484333 10935077 3137399..3137770 1 NC_015731.1 KEGG: nit:NAL212_2864 hypothetical protein; hypothetical protein 3137770 10935077 Nit79A3_2972 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696119.1 3137399 D 261292 CDS YP_004696120.1 339484334 10935078 complement(3137810..3138166) 1 NC_015731.1 KEGG: nit:NAL212_2866 hypothetical protein; hypothetical protein 3138166 10935078 Nit79A3_2973 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696120.1 3137810 R 261292 CDS YP_004696121.1 339484335 10935079 complement(3138271..3138966) 1 NC_015731.1 KEGG: nit:NAL212_2867 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 3138966 10935079 Nit79A3_2974 Nitrosomonas sp. Is79A3 Crp/Fnr family transcriptional regulator YP_004696121.1 3138271 R 261292 CDS YP_004696122.1 339484336 10935080 3139217..3140143 1 NC_015731.1 HAMAP: UPF0176 protein yceA; PFAM: Rhodanese-like; KEGG: slo:Shew_1781 hypothetical protein; SMART: Rhodanese-like; hypothetical protein 3140143 10935080 Nit79A3_2975 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696122.1 3139217 D 261292 CDS YP_004696123.1 339484337 10935081 complement(3140197..3140712) 1 NC_015731.1 KEGG: nit:NAL212_0143 cytochrome c family protein; cytochrome c family protein 3140712 10935081 Nit79A3_2976 Nitrosomonas sp. Is79A3 cytochrome c family protein YP_004696123.1 3140197 R 261292 CDS YP_004696124.1 339484338 10935082 complement(3140789..3142288) 1 NC_015731.1 PFAM: Transglutaminase-like; KEGG: hypothetical protein; transglutaminase domain-containing protein 3142288 10935082 Nit79A3_2977 Nitrosomonas sp. Is79A3 transglutaminase domain-containing protein YP_004696124.1 3140789 R 261292 CDS YP_004696125.1 339484339 10935083 complement(3142683..3144110) 1 NC_015731.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: bug:BC1001_1292 signal transduction protein; signal transduction protein 3144110 10935083 Nit79A3_2978 Nitrosomonas sp. Is79A3 signal transduction protein YP_004696125.1 3142683 R 261292 CDS YP_004696126.1 339484340 10935084 complement(3144107..3145747) 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: nit:NAL212_1597 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; diguanylate cyclase/phosphodiesterase 3145747 10935084 Nit79A3_2979 Nitrosomonas sp. Is79A3 diguanylate cyclase/phosphodiesterase YP_004696126.1 3144107 R 261292 CDS YP_004696127.1 339484341 10935085 complement(3146425..3147624) 1 NC_015731.1 TIGRFAM: Thiolase; KEGG: nit:NAL212_1990 acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 3147624 10935085 Nit79A3_2980 Nitrosomonas sp. Is79A3 acetyl-CoA acetyltransferase YP_004696127.1 3146425 R 261292 CDS YP_004696128.1 339484342 10935086 complement(3147683..3150211) 1 NC_015731.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG: nit:NAL212_1991 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; 3-hydroxyacyl-CoA dehydrogenase 3150211 10935086 Nit79A3_2981 Nitrosomonas sp. Is79A3 3-hydroxyacyl-CoA dehydrogenase YP_004696128.1 3147683 R 261292 CDS YP_004696129.1 339484343 10935087 complement(3150386..3150739) 1 NC_015731.1 KEGG: nit:NAL212_1992 ArsC family protein; TIGRFAM: Conserved hypothetical protein, ArsC related; PFAM: Arsenate reductase-like; ArsC family protein 3150739 10935087 Nit79A3_2982 Nitrosomonas sp. Is79A3 ArsC family protein YP_004696129.1 3150386 R 261292 CDS YP_004696130.1 339484344 10935088 complement(3150781..3151119) 1 NC_015731.1 PFAM: Cupin 2, conserved barrel; KEGG: nit:NAL212_1993 cupin 2 barrel domain-containing protein; cupin 3151119 10935088 Nit79A3_2983 Nitrosomonas sp. Is79A3 cupin YP_004696130.1 3150781 R 261292 CDS YP_004696131.1 339484345 10935089 complement(3151584..3151904) 1 NC_015731.1 hypothetical protein 3151904 10935089 Nit79A3_2984 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696131.1 3151584 R 261292 CDS YP_004696132.1 339484346 10935090 complement(3151947..3152831) 1 NC_015731.1 KEGG: dba:Dbac_0811 hypothetical protein; hypothetical protein 3152831 10935090 Nit79A3_2985 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696132.1 3151947 R 261292 CDS YP_004696133.1 339484347 10935091 complement(3153312..3154604) 1 NC_015731.1 PFAM: Protein of unknown function DUF1234; KEGG: nit:NAL212_1995 alpha/beta hydrolase, N-terminal protein; hypothetical protein 3154604 10935091 Nit79A3_2986 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696133.1 3153312 R 261292 CDS YP_004696134.1 339484348 10935092 complement(3154782..3155129) 1 NC_015731.1 KEGG: dak:DaAHT2_0488 hypothetical protein; hypothetical protein 3155129 10935092 Nit79A3_2987 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696134.1 3154782 R 261292 CDS YP_004696135.1 339484349 10935093 complement(3155110..3155406) 1 NC_015731.1 KEGG: tmz:Tmz1t_0495 hypothetical protein; hypothetical protein 3155406 10935093 Nit79A3_2988 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696135.1 3155110 R 261292 CDS YP_004696136.1 339484350 10935094 complement(3155667..3155921) 1 NC_015731.1 PFAM: Phosphopantetheine-binding; KEGG: nit:NAL212_1588 phosphopantetheine-binding protein; phosphopantetheine-binding protein 3155921 10935094 Nit79A3_2989 Nitrosomonas sp. Is79A3 phosphopantetheine-binding protein YP_004696136.1 3155667 R 261292 CDS YP_004696137.1 339484351 10935096 complement(3157239..3158201) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 3158201 10935096 Nit79A3_2991 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004696137.1 3157239 R 261292 CDS YP_004696138.1 339484352 10935097 complement(3158463..3159341) 1 NC_015731.1 KEGG: nit:NAL212_1491 hypothetical protein; hypothetical protein 3159341 10935097 Nit79A3_2992 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696138.1 3158463 R 261292 CDS YP_004696139.1 339484353 10935098 complement(3159520..3160599) 1 NC_015731.1 KEGG: sus:Acid_6890 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 3160599 10935098 Nit79A3_2993 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004696139.1 3159520 R 261292 CDS YP_004696140.1 339484354 10935099 3160742..3163000 1 NC_015731.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: nit:NAL212_1489 TonB-dependent receptor; TonB-dependent receptor 3163000 10935099 Nit79A3_2994 Nitrosomonas sp. Is79A3 TonB-dependent receptor YP_004696140.1 3160742 D 261292 CDS YP_004696141.1 339484355 10935100 3163077..3164201 1 NC_015731.1 KEGG: nit:NAL212_1485 glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase 3164201 10935100 Nit79A3_2995 Nitrosomonas sp. Is79A3 glucose sorbosone dehydrogenase YP_004696141.1 3163077 D 261292 CDS YP_004696142.1 339484356 10935101 3164486..3166561 1 NC_015731.1 TIGRFAM: polyphosphate kinase 1; HAMAP: Polyphosphate kinase; KEGG: nit:NAL212_1484 polyphosphate kinase; PFAM: Polyphosphate kinase; polyphosphate kinase 3166561 10935101 Nit79A3_2996 Nitrosomonas sp. Is79A3 polyphosphate kinase YP_004696142.1 3164486 D 261292 CDS YP_004696143.1 339484357 10935102 complement(3166558..3168042) 1 NC_015731.1 KEGG: nit:NAL212_1483 Ppx/GppA phosphatase; TIGRFAM: exopolyphosphatase; PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase 3168042 10935102 Nit79A3_2997 Nitrosomonas sp. Is79A3 Ppx/GppA phosphatase YP_004696143.1 3166558 R 261292 CDS YP_004696144.1 339484358 10935103 3168101..3168625 1 NC_015731.1 KEGG: nit:NAL212_1482 phosphohistidine phosphatase, SixA; TIGRFAM: Phosphohistidine phosphatase SixA, subgroup; PFAM: Phosphoglycerate mutase; phosphohistidine phosphatase, SixA 3168625 10935103 Nit79A3_2998 Nitrosomonas sp. Is79A3 phosphohistidine phosphatase, SixA YP_004696144.1 3168101 D 261292 CDS YP_004696145.1 339484359 10935104 complement(3168671..3169132) 1 NC_015731.1 KEGG: nit:NAL212_1481 hypothetical protein; hypothetical protein 3169132 10935104 Nit79A3_2999 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696145.1 3168671 R 261292 CDS YP_004696146.1 339484360 10935105 complement(3169323..3169682) 1 NC_015731.1 KEGG: nit:NAL212_1480 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 3169682 10935105 Nit79A3_3000 Nitrosomonas sp. Is79A3 HNH endonuclease YP_004696146.1 3169323 R 261292 CDS YP_004696147.1 339484361 10935106 complement(3169851..3171680) 1 NC_015731.1 PFAM: AMP-dependent synthetase/ligase; KEGG: nit:NAL212_1478 long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase/ligase 3171680 10935106 Nit79A3_3001 Nitrosomonas sp. Is79A3 AMP-dependent synthetase/ligase YP_004696147.1 3169851 R 261292 CDS YP_004696148.1 339484362 10935107 complement(3171750..3174221) 1 NC_015731.1 PFAM: Protein of unknown function DUF1974; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: nit:NAL212_1477 hypothetical protein; hypothetical protein 3174221 10935107 Nit79A3_3002 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696148.1 3171750 R 261292 CDS YP_004696149.1 339484363 10935108 3174463..3175665 1 NC_015731.1 TIGRFAM: Succinyl-diaminopimelate desuccinylase, proteobacteria; HAMAP: Succinyl-diaminopimelate desuccinylase, proteobacteria; KEGG: nit:NAL212_2292 succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation; Succinyl-diaminopimelate desuccinylase 3175665 10935108 Nit79A3_3003 Nitrosomonas sp. Is79A3 Succinyl-diaminopimelate desuccinylase YP_004696149.1 3174463 D 261292 CDS YP_004696150.1 339484364 10935109 complement(3175737..3176546) 1 NC_015731.1 hypothetical protein 3176546 10935109 Nit79A3_3004 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696150.1 3175737 R 261292 CDS YP_004696151.1 339484365 10935110 complement(3176650..3177291) 1 NC_015731.1 manually curated; KEGG: nit:NAL212_1049 hypothetical protein; hypothetical protein 3177291 10935110 Nit79A3_3005 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696151.1 3176650 R 261292 CDS YP_004696152.1 339484366 10935111 3177458..3178393 1 NC_015731.1 KEGG: nit:NAL212_2003 lipoprotein; lipoprotein 3178393 10935111 Nit79A3_3006 Nitrosomonas sp. Is79A3 lipoprotein YP_004696152.1 3177458 D 261292 CDS YP_004696153.1 339484367 10935112 complement(3178840..3179175) 1 NC_015731.1 KEGG: dps:DP2299 hypothetical protein; hypothetical protein 3179175 10935112 Nit79A3_3007 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696153.1 3178840 R 261292 CDS YP_004696154.1 339484368 10935113 complement(3179196..3179567) 1 NC_015731.1 KEGG: xac:XACa0008 hypothetical protein; hypothetical protein 3179567 10935113 Nit79A3_3008 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696154.1 3179196 R 261292 CDS YP_004696155.1 339484369 10935115 3180194..3181156 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase; transposase IS4 family protein 3181156 10935115 Nit79A3_3010 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004696155.1 3180194 D 261292 CDS YP_004696156.1 339484370 10935116 complement(3181255..3181539) 1 NC_015731.1 PFAM: Conserved hypothetical protein CHP02241, phage tail region protein; KEGG: ppd:Ppro_0372 phage tail protein; hypothetical protein 3181539 10935116 Nit79A3_3011 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696156.1 3181255 R 261292 CDS YP_004696157.1 339484371 10935117 complement(3181601..3183121) 1 NC_015731.1 PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, KEGG: nit:NAL212_1342 hypothetical protein; hypothetical protein 3183121 10935117 Nit79A3_3012 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696157.1 3181601 R 261292 CDS YP_004696158.1 339484372 10935118 3183324..3184328 1 NC_015731.1 KEGG: nit:NAL212_1341 glucokinase; TIGRFAM: Glucokinase; PFAM: Glucokinase; glucokinase 3184328 10935118 Nit79A3_3013 Nitrosomonas sp. Is79A3 glucokinase YP_004696158.1 3183324 D 261292 CDS YP_004696159.1 339484373 10935119 3184420..3186972 1 NC_015731.1 KEGG: nit:NAL212_1340 alpha-glucan phosphorylase; TIGRFAM: Alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; alpha-glucan phosphorylase 3186972 10935119 Nit79A3_3014 Nitrosomonas sp. Is79A3 alpha-glucan phosphorylase YP_004696159.1 3184420 D 261292 CDS YP_004696160.1 339484374 10935120 3187058..3187411 1 NC_015731.1 PFAM: Transposase IS3/IS911; KEGG: gca:Galf_0832 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 3187411 10935120 Nit79A3_3015 Nitrosomonas sp. Is79A3 transposase IS3/IS911 family protein YP_004696160.1 3187058 D 261292 CDS YP_004696161.1 339484375 10935122 complement(3188502..3191804) 1 NC_015731.1 KEGG: sli:Slin_5300 hypothetical protein; hypothetical protein 3191804 10935122 Nit79A3_3017 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696161.1 3188502 R 261292 CDS YP_004696162.1 339484376 10935124 complement(3192232..3192348) 1 NC_015731.1 hypothetical protein 3192348 10935124 Nit79A3_3019 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696162.1 3192232 R 261292 CDS YP_004696163.1 339484377 10935125 complement(3192502..3193083) 1 NC_015731.1 hypothetical protein 3193083 10935125 Nit79A3_3020 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696163.1 3192502 R 261292 CDS YP_004696164.1 339484378 10935126 complement(3193080..3194273) 1 NC_015731.1 TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; KEGG: meh:M301_0202 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthase 3194273 10935126 Nit79A3_3021 Nitrosomonas sp. Is79A3 S-adenosylmethionine synthase YP_004696164.1 3193080 R 261292 CDS YP_004696165.1 339484379 10935128 3199129..3200022 1 NC_015731.1 KEGG: rpe:RPE_4585 hypothetical protein; hypothetical protein 3200022 10935128 Nit79A3_3023 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696165.1 3199129 D 261292 CDS YP_004696166.1 339484380 10935129 3200591..3201679 1 NC_015731.1 KEGG: sus:Acid_4088 OmpA/MotB domain-containing protein; hypothetical protein 3201679 10935129 Nit79A3_3024 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696166.1 3200591 D 261292 CDS YP_004696167.1 339484381 10935130 complement(3201837..3202769) 1 NC_015731.1 KEGG: afe:Lferr_1426 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core; Integrase catalytic subunit 3202769 10935130 Nit79A3_3025 Nitrosomonas sp. Is79A3 Integrase catalytic subunit YP_004696167.1 3201837 R 261292 CDS YP_004696168.1 339484382 10935133 complement(3204383..3206581) 1 NC_015731.1 hypothetical protein 3206581 10935133 Nit79A3_3028 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696168.1 3204383 R 261292 CDS YP_004696169.1 339484383 10935134 complement(3206649..3208667) 1 NC_015731.1 KEGG: sus:Acid_7631 hypothetical protein; hypothetical protein 3208667 10935134 Nit79A3_3029 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696169.1 3206649 R 261292 CDS YP_004696170.1 339484384 10935135 complement(3208744..3209688) 1 NC_015731.1 KEGG: nmu:Nmul_A2047 hypothetical protein; hypothetical protein 3209688 10935135 Nit79A3_3030 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696170.1 3208744 R 261292 CDS YP_004696171.1 339484385 10935136 complement(3209906..3210325) 1 NC_015731.1 KEGG: ana:alr2947 hypothetical protein; hypothetical protein 3210325 10935136 Nit79A3_3031 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696171.1 3209906 R 261292 CDS YP_004696172.1 339484386 10935137 complement(3210363..3210869) 1 NC_015731.1 TIGRFAM: Conserved hypothetical protein CHP02594; KEGG: mdi:METDI4352 hypothetical protein; hypothetical protein 3210869 10935137 Nit79A3_3032 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696172.1 3210363 R 261292 CDS YP_004696173.1 339484387 10935138 complement(3210990..3211508) 1 NC_015731.1 hypothetical protein 3211508 10935138 Nit79A3_3033 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696173.1 3210990 R 261292 CDS YP_004696174.1 339484388 10935139 3211736..3213742 1 NC_015731.1 KEGG: bpy:Bphyt_2129 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; integral membrane sensor hybrid histidine kinase 3213742 10935139 Nit79A3_3034 Nitrosomonas sp. Is79A3 integral membrane sensor hybrid histidine kinase YP_004696174.1 3211736 D 261292 CDS YP_004696175.1 339484389 10935140 complement(3213670..3214416) 1 NC_015731.1 KEGG: bja:blr7015 two-component response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 3214416 10935140 Nit79A3_3035 Nitrosomonas sp. Is79A3 LuxR family transcriptional regulator YP_004696175.1 3213670 R 261292 CDS YP_004696176.1 339484390 10935141 3214588..3215994 1 NC_015731.1 KEGG: nit:NAL212_2397 membrane protein involved in aromatic hydrocarbon degradation; manually curated; PFAM: Membrane protein, aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 3215994 10935141 Nit79A3_3036 Nitrosomonas sp. Is79A3 aromatic hydrocarbon degradation membrane protein YP_004696176.1 3214588 D 261292 CDS YP_004696177.1 339484391 10935143 3216884..3218689 1 NC_015731.1 KEGG: bge:BC1002_7116 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; integral membrane sensor hybrid histidine kinase 3218689 10935143 Nit79A3_3038 Nitrosomonas sp. Is79A3 integral membrane sensor hybrid histidine kinase YP_004696177.1 3216884 D 261292 CDS YP_004696178.1 339484392 10935144 complement(3218679..3219332) 1 NC_015731.1 KEGG: slt:Slit_2581 LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; LuxR family transcriptional regulator 3219332 10935144 Nit79A3_3039 Nitrosomonas sp. Is79A3 LuxR family transcriptional regulator YP_004696178.1 3218679 R 261292 CDS YP_004696179.1 339484393 10935145 complement(3219657..3221864) 1 NC_015731.1 SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: 1,4-alpha-glucan branching enzyme, core region; KEGG: nit:NAL212_2770 1,4-alpha-glucan branching enzyme; HAMAP: 1,4-alpha-glucan branching enzyme, core region; PFAM: Alpha-amylase, C-terminal all beta; Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region; 1,4-alpha-glucan branching enzyme 3221864 10935145 Nit79A3_3040 Nitrosomonas sp. Is79A3 1,4-alpha-glucan branching enzyme YP_004696179.1 3219657 R 261292 CDS YP_004696180.1 339484394 10935146 3222022..3223341 1 NC_015731.1 TIGRFAM: Glucose-1-phosphate adenylyltransferase; HAMAP: Glucose-1-phosphate adenylyltransferase; KEGG: nit:NAL212_2769 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; Glucose-1-phosphate adenylyltransferase 3223341 10935146 Nit79A3_3041 Nitrosomonas sp. Is79A3 Glucose-1-phosphate adenylyltransferase YP_004696180.1 3222022 D 261292 CDS YP_004696181.1 339484395 10935147 3223369..3225072 1 NC_015731.1 PFAM: Glycoside hydrolase, family 57, core; KEGG: nit:NAL212_2768 glycoside hydrolase 57; glycoside hydrolase 57 3225072 10935147 Nit79A3_3042 Nitrosomonas sp. Is79A3 glycoside hydrolase 57 YP_004696181.1 3223369 D 261292 CDS YP_004696182.1 339484396 10935148 3225162..3227174 1 NC_015731.1 PFAM: Alpha-amylase/4-alpha-glucanotransferase, prokaryotic; Domain of unknown function DUF1925; Glycoside hydrolase, family 57, core; KEGG: nit:NAL212_2767 4-alpha-glucanotransferase; hypothetical protein 3227174 10935148 Nit79A3_3043 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696182.1 3225162 D 261292 CDS YP_004696183.1 339484397 10935149 3227278..3228912 1 NC_015731.1 KEGG: nit:NAL212_2766 glucose-6-phosphate isomerase; HAMAP: Phosphoglucose isomerase (PGI); PFAM: Phosphoglucose isomerase (PGI); Glucose-6-phosphate isomerase 3228912 10935149 Nit79A3_3044 Nitrosomonas sp. Is79A3 Glucose-6-phosphate isomerase YP_004696183.1 3227278 D 261292 CDS YP_004696184.1 339484398 10935150 3228923..3230398 1 NC_015731.1 TIGRFAM: Glycogen/starch synthases, ADP-glucose type; HAMAP: Glycogen/starch synthases, ADP-glucose type; KEGG: nit:NAL212_2765 glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic region; Glycosyl transferase, group 1; Glycogen synthase 3230398 10935150 Nit79A3_3045 Nitrosomonas sp. Is79A3 Glycogen synthase YP_004696184.1 3228923 D 261292 CDS YP_004696185.1 339484399 10935151 complement(3230448..3231863) 1 NC_015731.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; KEGG: nit:NAL212_1391 dihydrolipoyl dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3231863 10935151 Nit79A3_3046 Nitrosomonas sp. Is79A3 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004696185.1 3230448 R 261292 CDS YP_004696186.1 339484400 10935152 complement(3231915..3232325) 1 NC_015731.1 KEGG: pol:Bpro_2306 hypothetical protein; hypothetical protein 3232325 10935152 Nit79A3_3047 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696186.1 3231915 R 261292 CDS YP_004696187.1 339484401 10935153 complement(3232388..3232642) 1 NC_015731.1 KEGG: nit:NAL212_2550 nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 3232642 10935153 Nit79A3_3048 Nitrosomonas sp. Is79A3 nicotinamide mononucleotide transporter PnuC YP_004696187.1 3232388 R 261292 CDS YP_004696188.1 339484402 10935154 complement(3232706..3233044) 1 NC_015731.1 PFAM: Protein of unknown function DUF326; KEGG: nmu:Nmul_A1745 hypothetical protein; hypothetical protein 3233044 10935154 Nit79A3_3049 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696188.1 3232706 R 261292 CDS YP_004696189.1 339484403 10935155 3233267..3234040 1 NC_015731.1 KEGG: nit:NAL212_2399 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; SMART: HTH transcriptional regulator, Crp; Crp/Fnr family transcriptional regulator 3234040 10935155 Nit79A3_3050 Nitrosomonas sp. Is79A3 Crp/Fnr family transcriptional regulator YP_004696189.1 3233267 D 261292 CDS YP_004696190.1 339484404 10935156 complement(3234061..3234591) 1 NC_015731.1 PFAM: Redoxin; KEGG: hoh:Hoch_6651 redoxin; Redoxin domain-containing protein 3234591 10935156 Nit79A3_3051 Nitrosomonas sp. Is79A3 Redoxin domain-containing protein YP_004696190.1 3234061 R 261292 CDS YP_004696191.1 339484405 10935157 complement(3234727..3235197) 1 NC_015731.1 PFAM: Ferritin/Dps protein; KEGG: nhl:Nhal_1435 ferritin Dps family protein; ferritin 3235197 10935157 Nit79A3_3052 Nitrosomonas sp. Is79A3 ferritin YP_004696191.1 3234727 R 261292 CDS YP_004696192.1 339484406 10935158 complement(3235301..3235615) 1 NC_015731.1 PFAM: BolA-like protein; KEGG: nit:NAL212_1373 BolA family protein; BolA family protein 3235615 10935158 Nit79A3_3053 Nitrosomonas sp. Is79A3 BolA family protein YP_004696192.1 3235301 R 261292 CDS YP_004696193.1 339484407 10935159 complement(3235710..3235988) 1 NC_015731.1 PFAM: CsbD-like; KEGG: mms:mma_1042 hypothetical protein; CsbD family protein 3235988 10935159 Nit79A3_3054 Nitrosomonas sp. Is79A3 CsbD family protein YP_004696193.1 3235710 R 261292 CDS YP_004696194.1 339484408 10935160 complement(3236193..3237308) 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein 3237308 10935160 Nit79A3_3055 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004696194.1 3236193 R 261292 CDS YP_004696195.1 339484409 10935161 3237499..3239298 1 NC_015731.1 KEGG: nit:NAL212_2764 hypothetical protein; hypothetical protein 3239298 10935161 Nit79A3_3056 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696195.1 3237499 D 261292 CDS YP_004696196.1 339484410 10935162 complement(3239437..3240342) 1 NC_015731.1 KEGG: sma:SAV_4164 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 3240342 10935162 Nit79A3_3057 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004696196.1 3239437 R 261292 CDS YP_004696197.1 339484411 10935164 3241171..3241605 1 NC_015731.1 PFAM: 3-demethylubiquinone-9 3-O-methyltransferase; KEGG: nit:NAL212_2762 hypothetical protein; 3-demethylubiquinone-9 3-methyltransferase 3241605 10935164 Nit79A3_3059 Nitrosomonas sp. Is79A3 3-demethylubiquinone-9 3-methyltransferase YP_004696197.1 3241171 D 261292 CDS YP_004696198.1 339484412 10935165 3241602..3241826 1 NC_015731.1 KEGG: nit:NAL212_2761 hypothetical protein; hypothetical protein 3241826 10935165 Nit79A3_3060 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696198.1 3241602 D 261292 CDS YP_004696199.1 339484413 10935166 3241823..3242185 1 NC_015731.1 KEGG: nit:NAL212_2760 hypothetical protein; hypothetical protein 3242185 10935166 Nit79A3_3061 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696199.1 3241823 D 261292 CDS YP_004696200.1 339484414 10935167 3242362..3243057 1 NC_015731.1 KEGG: gme:Gmet_1207 hypothetical protein; hypothetical protein 3243057 10935167 Nit79A3_3062 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696200.1 3242362 D 261292 CDS YP_004696201.1 339484415 10935168 3243347..3244564 1 NC_015731.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; KEGG: nhl:Nhal_1988 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 3244564 10935168 Nit79A3_3063 Nitrosomonas sp. Is79A3 transposase IS116/IS110/IS902 family protein YP_004696201.1 3243347 D 261292 CDS YP_004696202.1 339484416 10935169 3244802..3245125 1 NC_015731.1 KEGG: nit:NAL212_0856 hypothetical protein; hypothetical protein 3245125 10935169 Nit79A3_3064 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696202.1 3244802 D 261292 CDS YP_004696203.1 339484417 10935170 3245139..3245288 1 NC_015731.1 hypothetical protein 3245288 10935170 Nit79A3_3065 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696203.1 3245139 D 261292 CDS YP_004696204.1 339484418 10935171 complement(3245378..3246232) 1 NC_015731.1 KEGG: nit:NAL212_2757 hypothetical protein; hypothetical protein 3246232 10935171 Nit79A3_3066 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696204.1 3245378 R 261292 CDS YP_004696205.1 339484419 10935172 3246682..3247326 1 NC_015731.1 hypothetical protein 3247326 10935172 Nit79A3_3067 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696205.1 3246682 D 261292 CDS YP_004696206.1 339484420 10935173 3247875..3249437 1 NC_015731.1 KEGG: hoh:Hoch_6445 thiol oxidoreductase-like protein; thiol oxidoreductase 3249437 10935173 Nit79A3_3068 Nitrosomonas sp. Is79A3 thiol oxidoreductase YP_004696206.1 3247875 D 261292 CDS YP_004696207.1 339484421 10935174 3249713..3250840 1 NC_015731.1 PFAM: NADPH-dependent FMN reductase; KEGG: pna:Pnap_0016 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 3250840 10935174 Nit79A3_3069 Nitrosomonas sp. Is79A3 NADPH-dependent FMN reductase YP_004696207.1 3249713 D 261292 CDS YP_004696208.1 339484422 10935175 3251099..3252364 1 NC_015731.1 TIGRFAM: Gamma-glutamyl phosphate reductase GPR; HAMAP: Glutamate-5-semialdehyde dehydrogenase; KEGG: nit:NAL212_1336 gamma-glutamyl phosphate reductase; PFAM: Aldehyde dehydrogenase; Gamma-glutamyl phosphate reductase 3252364 10935175 Nit79A3_3070 Nitrosomonas sp. Is79A3 Gamma-glutamyl phosphate reductase YP_004696208.1 3251099 D 261292 CDS YP_004696209.1 339484423 10935176 3252419..3254185 1 NC_015731.1 KEGG: nit:NAL212_1335 dihydrolipoamide dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Biotin/lipoyl attachment; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoamide dehydrogenase 3254185 10935176 Nit79A3_3071 Nitrosomonas sp. Is79A3 dihydrolipoamide dehydrogenase YP_004696209.1 3252419 D 261292 CDS YP_004696210.1 339484424 10935177 3254275..3254676 1 NC_015731.1 KEGG: nit:NAL212_1334 hypothetical protein; hypothetical protein 3254676 10935177 Nit79A3_3072 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696210.1 3254275 D 261292 CDS YP_004696211.1 339484425 10935178 3254771..3255574 1 NC_015731.1 PFAM: Protein of unknown function DUF785; KEGG: nit:NAL212_1333 hypothetical protein; hypothetical protein 3255574 10935178 Nit79A3_3073 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696211.1 3254771 D 261292 CDS YP_004696212.1 339484426 10935179 3255574..3257127 1 NC_015731.1 KEGG: nit:NAL212_1332 hypothetical protein; hypothetical protein 3257127 10935179 Nit79A3_3074 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696212.1 3255574 D 261292 CDS YP_004696213.1 339484427 10935180 3257108..3258109 1 NC_015731.1 TIGRFAM: Alpha-L-glutamate ligase-related protein; KEGG: nit:NAL212_1331 alpha-L-glutamate ligase-like protein; alpha-L-glutamate ligase 3258109 10935180 Nit79A3_3075 Nitrosomonas sp. Is79A3 alpha-L-glutamate ligase YP_004696213.1 3257108 D 261292 CDS YP_004696214.1 339484428 10935181 complement(3258148..3259812) 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction histidine kinase, phosphotransfer (Hpt) region; Signal transduction response regulator, receiver region; KEGG: nit:NAL212_1330 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase 3259812 10935181 Nit79A3_3076 Nitrosomonas sp. Is79A3 response regulator receiver modulated diguanylate cyclase YP_004696214.1 3258148 R 261292 CDS YP_004696215.1 339484429 10935183 3260239..3261108 1 NC_015731.1 KEGG: nit:NAL212_1116 esterase/lipase/thioesterase; esterase 3261108 10935183 Nit79A3_3078 Nitrosomonas sp. Is79A3 esterase YP_004696215.1 3260239 D 261292 CDS YP_004696216.1 339484430 10935184 3261230..3261679 1 NC_015731.1 PFAM: UspA; KEGG: nit:NAL212_1115 UspA domain-containing protein; UspA domain-containing protein 3261679 10935184 Nit79A3_3079 Nitrosomonas sp. Is79A3 UspA domain-containing protein YP_004696216.1 3261230 D 261292 CDS YP_004696217.1 339484431 10935185 complement(3261706..3262482) 1 NC_015731.1 TIGRFAM: Outer membrane assembly lipoprotein YfiO; KEGG: nit:NAL212_1114 outer membrane assembly lipoprotein YfiO; outer membrane assembly lipoprotein YfiO 3262482 10935185 Nit79A3_3080 Nitrosomonas sp. Is79A3 outer membrane assembly lipoprotein YfiO YP_004696217.1 3261706 R 261292 CDS YP_004696218.1 339484432 10935186 3262508..3263539 1 NC_015731.1 KEGG: nit:NAL212_1113 pseudouridine synthase, RluA family; TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; pseudouridine synthase 3263539 10935186 Nit79A3_3081 Nitrosomonas sp. Is79A3 pseudouridine synthase YP_004696218.1 3262508 D 261292 CDS YP_004696219.1 339484433 10935187 complement(3263606..3264979) 1 NC_015731.1 PFAM: Protein of unknown function DUF1597; KEGG: nit:NAL212_1112 hypothetical protein; hypothetical protein 3264979 10935187 Nit79A3_3082 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696219.1 3263606 R 261292 CDS YP_004696220.1 339484434 10935188 3265621..3266496 1 NC_015731.1 PFAM: Type IV pilus assembly PilZ; KEGG: nit:NAL212_1111 type IV pilus assembly PilZ; type IV pilus assembly PilZ 3266496 10935188 Nit79A3_3083 Nitrosomonas sp. Is79A3 type IV pilus assembly PilZ YP_004696220.1 3265621 D 261292 CDS YP_004696221.1 339484435 10935189 complement(3266526..3267191) 1 NC_015731.1 KEGG: nit:NAL212_1110 CAAX prenyl protease-like protein; TIGRFAM: Prenyl protease-related; PFAM: Abortive infection protein; CAAX prenyl protease-like protein 3267191 10935189 Nit79A3_3084 Nitrosomonas sp. Is79A3 CAAX prenyl protease-like protein YP_004696221.1 3266526 R 261292 CDS YP_004696222.1 339484436 10935190 complement(3267363..3268544) 1 NC_015731.1 KEGG: nit:NAL212_1109 DNA-directed DNA polymerase; HAMAP: DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like; DNA polymerase IV 3268544 10935190 Nit79A3_3085 Nitrosomonas sp. Is79A3 DNA polymerase IV YP_004696222.1 3267363 R 261292 CDS YP_004696223.1 339484437 10935191 3268588..3268998 1 NC_015731.1 HAMAP: UPF0225 protein ychJ; KEGG: nmu:Nmul_A1106 hypothetical protein; hypothetical protein 3268998 10935191 Nit79A3_3086 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696223.1 3268588 D 261292 CDS YP_004696224.1 339484438 10935192 complement(3269055..3270317) 1 NC_015731.1 PFAM: Protein of unknown function DUF2279, periplasmic lipoprotein; KEGG: nmu:Nmul_A2261 hypothetical protein; hypothetical protein 3270317 10935192 Nit79A3_3087 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696224.1 3269055 R 261292 CDS YP_004696225.1 339484439 10935193 complement(3270399..3270947) 1 NC_015731.1 TIGRFAM: Transcription elongation factor GreB, prokaryotic; HAMAP: Transcription elongation factor greA; KEGG: nit:NAL212_2202 transcription elongation factor GreB; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; transcription elongation factor GreB 3270947 10935193 Nit79A3_3088 Nitrosomonas sp. Is79A3 transcription elongation factor GreB YP_004696225.1 3270399 R 261292 CDS YP_004696226.1 339484440 10935194 3271110..3272426 1 NC_015731.1 KEGG: amr:AM1_6060 histidine decarboxylase; histidine decarboxylase 3272426 10935194 Nit79A3_3089 Nitrosomonas sp. Is79A3 histidine decarboxylase YP_004696226.1 3271110 D 261292 CDS YP_004696227.1 339484441 10935195 complement(3272433..3272765) 1 NC_015731.1 PFAM: Small multidrug resistance protein; KEGG: nit:NAL212_2771 small multidrug resistance protein; small multidrug resistance protein 3272765 10935195 Nit79A3_3090 Nitrosomonas sp. Is79A3 small multidrug resistance protein YP_004696227.1 3272433 R 261292 CDS YP_004696228.1 339484442 10935196 complement(3272796..3273764) 1 NC_015731.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; KEGG: nit:NAL212_0587 phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 3273764 10935196 Nit79A3_3091 Nitrosomonas sp. Is79A3 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004696228.1 3272796 R 261292 CDS YP_004696229.1 339484443 10935197 complement(3273976..3274449) 1 NC_015731.1 KEGG: sde:Sde_2290 hypothetical protein; hypothetical protein 3274449 10935197 Nit79A3_3092 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696229.1 3273976 R 261292 CDS YP_004696230.1 339484444 10935198 complement(3274739..3275956) 1 NC_015731.1 KEGG: nit:NAL212_0581 hypothetical protein; hypothetical protein 3275956 10935198 Nit79A3_3093 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696230.1 3274739 R 261292 CDS YP_004696231.1 339484445 10935199 complement(3275946..3276782) 1 NC_015731.1 PFAM: Abortive infection protein; KEGG: cvi:CV_3749 hypothetical protein; Abortive infection protein 3276782 10935199 Nit79A3_3094 Nitrosomonas sp. Is79A3 Abortive infection protein YP_004696231.1 3275946 R 261292 CDS YP_004696232.1 339484446 10935200 complement(3276977..3278362) 1 NC_015731.1 TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: nit:NAL212_0580 replicative DNA helicase; SMART: ATPase, AAA+ type, core; replicative DNA helicase 3278362 10935200 Nit79A3_3095 Nitrosomonas sp. Is79A3 replicative DNA helicase YP_004696232.1 3276977 R 261292 CDS YP_004696233.1 339484447 10935201 complement(3278480..3278935) 1 NC_015731.1 TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; HAMAP: Ribosomal protein L9, bacteria/chloroplast; KEGG: nit:NAL212_0579 50S ribosomal protein L9; PFAM: Ribosomal protein L9, N-terminal; Ribosomal protein L9, C-terminal; 50S ribosomal protein L9 3278935 10935201 Nit79A3_3096 Nitrosomonas sp. Is79A3 50S ribosomal protein L9 YP_004696233.1 3278480 R 261292 CDS YP_004696234.1 339484448 10935202 complement(3278947..3279228) 1 NC_015731.1 TIGRFAM: Ribosomal protein S18; HAMAP: 30S ribosomal protein S18; KEGG: nit:NAL212_0578 30S ribosomal protein S18; PFAM: Ribosomal protein S18; 30S ribosomal protein S18 3279228 10935202 Nit79A3_3097 Nitrosomonas sp. Is79A3 30S ribosomal protein S18 YP_004696234.1 3278947 R 261292 CDS YP_004696235.1 339484449 10935203 complement(3279248..3279544) 1 NC_015731.1 KEGG: nit:NAL212_0577 single-strand binding protein/primosomal replication protein N; manually curated; PFAM: Primosome PriB/single-strand DNA-binding; single-strand binding protein/Primosomal replication protein n 3279544 10935203 Nit79A3_3098 Nitrosomonas sp. Is79A3 single-strand binding protein/Primosomal replication protein n YP_004696235.1 3279248 R 261292 CDS YP_004696236.1 339484450 10935204 complement(3279557..3279997) 1 NC_015731.1 TIGRFAM: Ribosomal protein S6; HAMAP: Ribosomal protein S6, bacterial-like; KEGG: nit:NAL212_0576 30S ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; 30S ribosomal protein S6 3279997 10935204 Nit79A3_3099 Nitrosomonas sp. Is79A3 30S ribosomal protein S6 YP_004696236.1 3279557 R 261292 CDS YP_004696237.1 339484451 10935205 3280291..3280854 1 NC_015731.1 KEGG: nit:NAL212_0575 glutamine amidotransferase of anthranilate synthase; TIGRFAM: Glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I, C-terminal; glutamine amidotransferase of anthranilate synthase 3280854 10935205 Nit79A3_3100 Nitrosomonas sp. Is79A3 glutamine amidotransferase of anthranilate synthase YP_004696237.1 3280291 D 261292 CDS YP_004696238.1 339484452 10935206 3280882..3281907 1 NC_015731.1 TIGRFAM: Anthranilate phosphoribosyl transferase; HAMAP: Anthranilate phosphoribosyl transferase; KEGG: nit:NAL212_0574 anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; Anthranilate phosphoribosyltransferase 3281907 10935206 Nit79A3_3101 Nitrosomonas sp. Is79A3 Anthranilate phosphoribosyltransferase YP_004696238.1 3280882 D 261292 CDS YP_004696239.1 339484453 10935207 3281915..3282751 1 NC_015731.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: nit:NAL212_0573 indole-3-glycerol-phosphate synthase; indole-3-glycerol phosphate synthase 3282751 10935207 Nit79A3_3102 Nitrosomonas sp. Is79A3 indole-3-glycerol phosphate synthase YP_004696239.1 3281915 D 261292 CDS YP_004696240.1 339484454 10935208 3282900..3283748 1 NC_015731.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: nit:NAL212_0572 metal-dependent hydrolase HDOD; Metal-dependent hydrolase HDOD 3283748 10935208 Nit79A3_3103 Nitrosomonas sp. Is79A3 Metal-dependent hydrolase HDOD YP_004696240.1 3282900 D 261292 CDS YP_004696241.1 339484455 10935209 complement(3283989..3285788) 1 NC_015731.1 KEGG: sea:SeAg_B2870 hypothetical protein; hypothetical protein 3285788 10935209 Nit79A3_3104 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696241.1 3283989 R 261292 CDS YP_004696242.1 339484456 10935210 3286595..3287050 1 NC_015731.1 hypothetical protein 3287050 10935210 Nit79A3_3105 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696242.1 3286595 D 261292 CDS YP_004696243.1 339484457 10935211 3287512..3288396 1 NC_015731.1 KEGG: sbm:Shew185_4132 hypothetical protein; hypothetical protein 3288396 10935211 Nit79A3_3106 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696243.1 3287512 D 261292 CDS YP_004696244.1 339484458 10935212 3289143..3290153 1 NC_015731.1 hypothetical protein 3290153 10935212 Nit79A3_3107 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696244.1 3289143 D 261292 CDS YP_004696245.1 339484459 10935213 3290298..3290639 1 NC_015731.1 hypothetical protein 3290639 10935213 Nit79A3_3108 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696245.1 3290298 D 261292 CDS YP_004696246.1 339484460 10935214 3291134..3291970 1 NC_015731.1 KEGG: dar:Daro_1040 hypothetical protein; hypothetical protein 3291970 10935214 Nit79A3_3109 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696246.1 3291134 D 261292 CDS YP_004696247.1 339484461 10935215 3292076..3293458 1 NC_015731.1 KEGG: nit:NAL212_0325 replication initiation factor; replication initiation factor 3293458 10935215 Nit79A3_3110 Nitrosomonas sp. Is79A3 replication initiation factor YP_004696247.1 3292076 D 261292 CDS YP_004696248.1 339484462 10935216 3293455..3293784 1 NC_015731.1 KEGG: nit:NAL212_2472 DNA binding protein, excisionase; DNA binding protein, excisionase 3293784 10935216 Nit79A3_3111 Nitrosomonas sp. Is79A3 DNA binding protein, excisionase YP_004696248.1 3293455 D 261292 CDS YP_004696249.1 339484463 10935217 3293661..3294698 1 NC_015731.1 KEGG: nit:NAL212_0327 integrase; manually curated; PFAM: Integrase, catalytic core, phage; integrase 3294698 10935217 Nit79A3_3112 Nitrosomonas sp. Is79A3 integrase YP_004696249.1 3293661 D 261292 CDS YP_004696250.1 339484464 10935219 complement(3294819..3295247) 1 NC_015731.1 PFAM: Stringent starvation protein B; KEGG: nit:NAL212_2477 stringent starvation protein B; Stringent starvation protein B 3295247 10935219 Nit79A3_3113 Nitrosomonas sp. Is79A3 Stringent starvation protein B YP_004696250.1 3294819 R 261292 CDS YP_004696251.1 339484465 10935220 complement(3295244..3295843) 1 NC_015731.1 PFAM: Glutathione S-transferase, N-terminal; KEGG: nit:NAL212_2478 glutathione S-transferase domain; Glutathione S-transferase domain-containing protein 3295843 10935220 Nit79A3_3114 Nitrosomonas sp. Is79A3 Glutathione S-transferase domain-containing protein YP_004696251.1 3295244 R 261292 CDS YP_004696252.1 339484466 10935221 complement(3295891..3296613) 1 NC_015731.1 PFAM: Cytochrome c1; KEGG: nit:NAL212_2479 cytochrome c1; cytochrome c1 3296613 10935221 Nit79A3_3115 Nitrosomonas sp. Is79A3 cytochrome c1 YP_004696252.1 3295891 R 261292 CDS YP_004696253.1 339484467 10935222 complement(3296618..3297853) 1 NC_015731.1 PFAM: Cytochrome b/b6, N-terminal; Cytochrome b/b6, C-terminal; KEGG: nit:NAL212_2480 cytochrome b/b6 domain; Cytochrome b/b6 domain-containing protein 3297853 10935222 Nit79A3_3116 Nitrosomonas sp. Is79A3 Cytochrome b/b6 domain-containing protein YP_004696253.1 3296618 R 261292 CDS YP_004696254.1 339484468 10935223 complement(3297854..3298462) 1 NC_015731.1 KEGG: nit:NAL212_2481 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: Ubiquinol-cytochrome c reductase, iron-sulphur subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; ubiquinol-cytochrome c reductase, iron-sulfur subunit 3298462 10935223 Nit79A3_3117 Nitrosomonas sp. Is79A3 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_004696254.1 3297854 R 261292 CDS YP_004696255.1 339484469 10935224 complement(3298680..3301412) 1 NC_015731.1 TIGRFAM: SecA protein; HAMAP: Protein translocase subunit secA; KEGG: nit:NAL212_2482 preprotein translocase, SecA subunit; PFAM: SecA DEAD-like; SecA preprotein cross-linking region; SecA Wing/Scaffold; SEC-C motif; Protein translocase subunit secA 3301412 10935224 Nit79A3_3118 Nitrosomonas sp. Is79A3 Protein translocase subunit secA YP_004696255.1 3298680 R 261292 CDS YP_004696256.1 339484470 10935225 complement(3301670..3302587) 1 NC_015731.1 PFAM: Peptidase M23; KEGG: nit:NAL212_2483 peptidase M23; peptidase M23 3302587 10935225 Nit79A3_3119 Nitrosomonas sp. Is79A3 peptidase M23 YP_004696256.1 3301670 R 261292 CDS YP_004696257.1 339484471 10935226 3302622..3303086 1 NC_015731.1 PFAM: Protein of unknown function DUF721; KEGG: nit:NAL212_2484 hypothetical protein; hypothetical protein 3303086 10935226 Nit79A3_3120 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696257.1 3302622 D 261292 CDS YP_004696258.1 339484472 10935227 3303371..3305227 1 NC_015731.1 PFAM: Ribonuclease II/R; KEGG: nit:NAL212_2487 ribonuclease II; ribonuclease II 3305227 10935227 Nit79A3_3121 Nitrosomonas sp. Is79A3 ribonuclease II YP_004696258.1 3303371 D 261292 CDS YP_004696259.1 339484473 10935228 3305317..3306234 1 NC_015731.1 TIGRFAM: TonB, C-terminal; KEGG: nit:NAL212_2488 TonB family protein; TonB family protein 3306234 10935228 Nit79A3_3122 Nitrosomonas sp. Is79A3 TonB family protein YP_004696259.1 3305317 D 261292 CDS YP_004696260.1 339484474 10935229 3306295..3307110 1 NC_015731.1 TIGRFAM: Quinate/shikimate 5-dehydrogenase; HAMAP: Shikimate dehydrogenase; KEGG: nit:NAL212_2489 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Shikimate dehydrogenase 3307110 10935229 Nit79A3_3123 Nitrosomonas sp. Is79A3 Shikimate dehydrogenase YP_004696260.1 3306295 D 261292 CDS YP_004696261.1 339484475 10935230 3307445..3308884 1 NC_015731.1 KEGG: nit:NAL212_2490 magnesium transporter; TIGRFAM: Divalent cation transporter; PFAM: Magnesium transporter, MgtE intracellular region; Cystathionine beta-synthase, core; MgtE integral membrane region; magnesium transporter 3308884 10935230 Nit79A3_3124 Nitrosomonas sp. Is79A3 magnesium transporter YP_004696261.1 3307445 D 261292 CDS YP_004696262.1 339484476 10935231 3308895..3309407 1 NC_015731.1 KEGG: eba:ebA6029 hypothetical protein; hypothetical protein 3309407 10935231 Nit79A3_3125 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696262.1 3308895 D 261292 CDS YP_004696263.1 339484477 10935232 3309512..3310180 1 NC_015731.1 PFAM: NADPH-dependent FMN reductase; KEGG: aeh:Mlg_2714 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 3310180 10935232 Nit79A3_3126 Nitrosomonas sp. Is79A3 NADPH-dependent FMN reductase YP_004696263.1 3309512 D 261292 CDS YP_004696264.1 339484478 10935233 3310428..3310673 1 NC_015731.1 PFAM: Protein of unknown function DUF2132; KEGG: psa:PST_1146 hypothetical protein; hypothetical protein 3310673 10935233 Nit79A3_3127 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696264.1 3310428 D 261292 CDS YP_004696265.1 339484479 10935234 3310670..3310882 1 NC_015731.1 KEGG: pca:Pcar_2636 RNA-binding protein; RNA-binding protein 3310882 10935234 Nit79A3_3128 Nitrosomonas sp. Is79A3 RNA-binding protein YP_004696265.1 3310670 D 261292 CDS YP_004696266.1 339484480 10935235 3310963..3313158 1 NC_015731.1 KEGG: nit:NAL212_1707 rRNA (guanine-N(2)-)-methyltransferase; HAMAP: S-adenosyl-L-dependent RNA methyltransferase, bacteria,; PFAM: RNA methylase; THUMP; Ribosomal RNA large subunit methyltransferase L 3313158 10935235 Nit79A3_3129 Nitrosomonas sp. Is79A3 Ribosomal RNA large subunit methyltransferase L YP_004696266.1 3310963 D 261292 CDS YP_004696267.1 339484481 10935236 3313326..3313520 1 NC_015731.1 KEGG: nit:NAL212_0164 CopG family protein; CopG family transcriptional regulator 3313520 10935236 Nit79A3_3130 Nitrosomonas sp. Is79A3 CopG family transcriptional regulator YP_004696267.1 3313326 D 261292 CDS YP_004696268.1 339484482 10935237 3313549..3313890 1 NC_015731.1 KEGG: nit:NAL212_0163 transcriptional modulator of MazE/toxin, MazF; manually curated; PFAM: PemK-like protein; transcriptional modulator of MazE/toxin, MazF 3313890 10935237 Nit79A3_3131 Nitrosomonas sp. Is79A3 transcriptional modulator of MazE/toxin, MazF YP_004696268.1 3313549 D 261292 CDS YP_004696269.1 339484483 10935238 complement(3313969..3317121) 1 NC_015731.1 KEGG: nit:NAL212_0660 heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; CzcA family heavy metal efflux pump 3317121 10935238 Nit79A3_3132 Nitrosomonas sp. Is79A3 CzcA family heavy metal efflux pump YP_004696269.1 3313969 R 261292 CDS YP_004696270.1 339484484 10935239 complement(3317160..3318659) 1 NC_015731.1 KEGG: nit:NAL212_0661 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 3318659 10935239 Nit79A3_3133 Nitrosomonas sp. Is79A3 RND family efflux transporter MFP subunit YP_004696270.1 3317160 R 261292 CDS YP_004696271.1 339484485 10935240 complement(3318678..3320111) 1 NC_015731.1 PFAM: Outer membrane efflux protein; KEGG: nit:NAL212_0016 outer membrane efflux protein; outer membrane efflux protein 3320111 10935240 Nit79A3_3134 Nitrosomonas sp. Is79A3 outer membrane efflux protein YP_004696271.1 3318678 R 261292 CDS YP_004696272.1 339484486 10935241 complement(3320224..3320610) 1 NC_015731.1 KEGG: nit:NAL212_0663 hypothetical protein; hypothetical protein 3320610 10935241 Nit79A3_3135 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696272.1 3320224 R 261292 CDS YP_004696273.1 339484487 10935242 complement(3320826..3321422) 1 NC_015731.1 TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: nit:NAL212_0664 septum formation protein Maf; PFAM: Maf-like protein; Septum formation protein Maf 3321422 10935242 Nit79A3_3136 Nitrosomonas sp. Is79A3 Septum formation protein Maf YP_004696273.1 3320826 R 261292 CDS YP_004696274.1 339484488 10935243 3321490..3322005 1 NC_015731.1 PFAM: Protein of unknown function DUF177; KEGG: nit:NAL212_0665 hypothetical protein; hypothetical protein 3322005 10935243 Nit79A3_3137 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696274.1 3321490 D 261292 CDS YP_004696275.1 339484489 10935244 3322024..3322203 1 NC_015731.1 TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: nit:NAL212_0666 50S ribosomal protein L32; PFAM: Ribosomal protein L32p; 50S ribosomal protein L32 3322203 10935244 Nit79A3_3138 Nitrosomonas sp. Is79A3 50S ribosomal protein L32 YP_004696275.1 3322024 D 261292 CDS YP_004696276.1 339484490 10935245 3322270..3323310 1 NC_015731.1 TIGRFAM: Phospholipid biosynthesis protein, PlsX like; HAMAP: Phospholipid biosynthesis protein, PlsX like; KEGG: nit:NAL212_0667 phosphate acyltransferase; PFAM: Fatty acid synthesis plsX protein; Phosphate acyltransferase 3323310 10935245 Nit79A3_3139 Nitrosomonas sp. Is79A3 Phosphate acyltransferase YP_004696276.1 3322270 D 261292 CDS YP_004696277.1 339484491 10935246 3323310..3324266 1 NC_015731.1 TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: nit:NAL212_0668 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-ACP synthase 3324266 10935246 Nit79A3_3140 Nitrosomonas sp. Is79A3 3-oxoacyl-ACP synthase YP_004696277.1 3323310 D 261292 CDS YP_004696278.1 339484492 10935247 3324270..3325214 1 NC_015731.1 KEGG: nit:NAL212_0669 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; malonyl CoA-ACP transacylase 3325214 10935247 Nit79A3_3141 Nitrosomonas sp. Is79A3 malonyl CoA-ACP transacylase YP_004696278.1 3324270 D 261292 CDS YP_004696279.1 339484493 10935248 3325263..3326006 1 NC_015731.1 KEGG: nit:NAL212_0670 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 3326006 10935248 Nit79A3_3142 Nitrosomonas sp. Is79A3 3-oxoacyl-ACP reductase YP_004696279.1 3325263 D 261292 CDS YP_004696280.1 339484494 10935249 3326124..3326360 1 NC_015731.1 TIGRFAM: Acyl carrier protein (ACP); HAMAP: Acyl carrier protein (ACP); KEGG: nit:NAL212_0671 acyl carrier protein; PFAM: Phosphopantetheine-binding; acyl carrier protein 3326360 10935249 Nit79A3_3143 Nitrosomonas sp. Is79A3 acyl carrier protein YP_004696280.1 3326124 D 261292 CDS YP_004696281.1 339484495 10935250 3326397..3327638 1 NC_015731.1 KEGG: nit:NAL212_0672 3-oxoacyl-(acyl-carrier-protein) synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; 3-oxoacyl-ACP synthase 3327638 10935250 Nit79A3_3144 Nitrosomonas sp. Is79A3 3-oxoacyl-ACP synthase YP_004696281.1 3326397 D 261292 CDS YP_004696282.1 339484496 10935251 3327662..3328657 1 NC_015731.1 KEGG: nit:NAL212_0673 aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family YceG-like; PFAM: Uncharacterised protein family YceG-like; aminodeoxychorismate lyase 3328657 10935251 Nit79A3_3145 Nitrosomonas sp. Is79A3 aminodeoxychorismate lyase YP_004696282.1 3327662 D 261292 CDS YP_004696283.1 339484497 10935252 3328705..3331293 1 NC_015731.1 PFAM: Glycosyl transferase, family 2; GtrA-like protein; Glycosyl transferase, family 39; KEGG: nit:NAL212_0674 dolichyl-phosphate beta-D-mannosyltransferase; glycosyl transferase 2 3331293 10935252 Nit79A3_3146 Nitrosomonas sp. Is79A3 glycosyl transferase 2 YP_004696283.1 3328705 D 261292 CDS YP_004696284.1 339484498 10935253 complement(3331515..3331931) 1 NC_015731.1 KEGG: nit:NAL212_2635 hypothetical protein; hypothetical protein 3331931 10935253 Nit79A3_3147 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696284.1 3331515 R 261292 CDS YP_004696285.1 339484499 10935254 complement(3331980..3332780) 1 NC_015731.1 PFAM: Zinc/iron permease; KEGG: nit:NAL212_2634 zinc/iron permease; zinc/iron permease 3332780 10935254 Nit79A3_3148 Nitrosomonas sp. Is79A3 zinc/iron permease YP_004696285.1 3331980 R 261292 CDS YP_004696286.1 339484500 10935255 complement(3332853..3333599) 1 NC_015731.1 KEGG: nit:NAL212_2633 multi-copper polyphenol oxidoreductase, laccase; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase; Multi-copper polyphenol oxidoreductase, laccase 3333599 10935255 Nit79A3_3149 Nitrosomonas sp. Is79A3 Multi-copper polyphenol oxidoreductase, laccase YP_004696286.1 3332853 R 261292 CDS YP_004696287.1 339484501 10935256 3333832..3334992 1 NC_015731.1 PFAM: Ankyrin repeat; KEGG: nit:NAL212_2632 ankyrin; Ankyrin 3334992 10935256 Nit79A3_3150 Nitrosomonas sp. Is79A3 Ankyrin YP_004696287.1 3333832 D 261292 CDS YP_004696288.1 339484502 10935257 3335007..3335759 1 NC_015731.1 PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: nit:NAL212_2631 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 3335759 10935257 Nit79A3_3151 Nitrosomonas sp. Is79A3 glycerophosphoryl diester phosphodiesterase YP_004696288.1 3335007 D 261292 CDS YP_004696289.1 339484503 10935258 3335756..3337345 1 NC_015731.1 PFAM: FAD dependent oxidoreductase; KEGG: nit:NAL212_2630 glycerol-3-phosphate dehydrogenase; FAD dependent oxidoreductase 3337345 10935258 Nit79A3_3152 Nitrosomonas sp. Is79A3 FAD dependent oxidoreductase YP_004696289.1 3335756 D 261292 CDS YP_004696290.1 339484504 10935259 3337330..3338736 1 NC_015731.1 PFAM: Carbohydrate kinase, FGGY, N-terminal; KEGG: nit:NAL212_2629 glycerol kinase; carbohydrate kinase 3338736 10935259 Nit79A3_3153 Nitrosomonas sp. Is79A3 carbohydrate kinase YP_004696290.1 3337330 D 261292 CDS YP_004696291.1 339484505 10935260 3338925..3339515 1 NC_015731.1 KEGG: nit:NAL212_2628 hypothetical protein; hypothetical protein 3339515 10935260 Nit79A3_3154 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696291.1 3338925 D 261292 CDS YP_004696292.1 339484506 10935261 3339603..3340328 1 NC_015731.1 PFAM: Glycosyl transferase, family 2; KEGG: nit:NAL212_2627 glycosyl transferase 2; glycosyl transferase 2 3340328 10935261 Nit79A3_3155 Nitrosomonas sp. Is79A3 glycosyl transferase 2 YP_004696292.1 3339603 D 261292 CDS YP_004696293.1 339484507 10935262 3340627..3342066 1 NC_015731.1 KEGG: ade:Adeh_2940 hypothetical protein; hypothetical protein 3342066 10935262 Nit79A3_3156 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696293.1 3340627 D 261292 CDS YP_004696294.1 339484508 10935263 3342516..3343907 1 NC_015731.1 KEGG: dre:798921 si:ch211-217k17.9; hypothetical protein 3343907 10935263 Nit79A3_3157 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696294.1 3342516 D 261292 CDS YP_004696295.1 339484509 10935264 complement(3344132..3346849) 1 NC_015731.1 KEGG: nit:NAL212_2584 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; P-type HAD superfamily ATPase 3346849 10935264 Nit79A3_3158 Nitrosomonas sp. Is79A3 P-type HAD superfamily ATPase YP_004696295.1 3344132 R 261292 CDS YP_004696296.1 339484510 10935265 3346949..3347506 1 NC_015731.1 PFAM: Beta-lactamase hydrolase-like; KEGG: nit:NAL212_2585 beta-lactamase hydrolase-family protein; beta-lactamase hydrolase-family protein 3347506 10935265 Nit79A3_3159 Nitrosomonas sp. Is79A3 beta-lactamase hydrolase-family protein YP_004696296.1 3346949 D 261292 CDS YP_004696297.1 339484511 10935268 complement(3350052..3350384) 1 NC_015731.1 KEGG: nit:NAL212_2589 regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 3350384 10935268 Nit79A3_3162 Nitrosomonas sp. Is79A3 regulatory protein ArsR YP_004696297.1 3350052 R 261292 CDS YP_004696298.1 339484512 10935269 complement(3350505..3350918) 1 NC_015731.1 PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: nit:NAL212_2590 hypothetical protein; hypothetical protein 3350918 10935269 Nit79A3_3163 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696298.1 3350505 R 261292 CDS YP_004696299.1 339484513 10935271 3351507..3352367 1 NC_015731.1 KEGG: nit:NAL212_2592 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein 3352367 10935271 Nit79A3_3165 Nitrosomonas sp. Is79A3 beta-lactamase domain-containing protein YP_004696299.1 3351507 D 261292 CDS YP_004696300.1 339484514 10935272 complement(3352491..3353504) 1 NC_015731.1 PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; KEGG: nit:NAL212_2593 heat shock protein DnaJ domain-containing protein; molecular chaperone DnaJ 3353504 10935272 Nit79A3_3166 Nitrosomonas sp. Is79A3 molecular chaperone DnaJ YP_004696300.1 3352491 R 261292 CDS YP_004696301.1 339484515 10935273 complement(3353583..3353834) 1 NC_015731.1 hypothetical protein 3353834 10935273 Nit79A3_3167 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696301.1 3353583 R 261292 CDS YP_004696302.1 339484516 10935274 3353854..3354039 1 NC_015731.1 PFAM: Hemin uptake protein hemP; KEGG: nit:NAL212_2594 hemin uptake protein HemP; Hemin uptake protein hemP 3354039 10935274 Nit79A3_3168 Nitrosomonas sp. Is79A3 Hemin uptake protein hemP YP_004696302.1 3353854 D 261292 CDS YP_004696303.1 339484517 10935275 3354255..3354719 1 NC_015731.1 KEGG: nit:NAL212_2595 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein; bacterioferritin 3354719 10935275 Nit79A3_3169 Nitrosomonas sp. Is79A3 bacterioferritin YP_004696303.1 3354255 D 261292 CDS YP_004696304.1 339484518 10935276 3354840..3355508 1 NC_015731.1 KEGG: nit:NAL212_2596 hypothetical protein; hypothetical protein 3355508 10935276 Nit79A3_3170 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696304.1 3354840 D 261292 CDS YP_004696305.1 339484519 10935277 3355844..3356050 1 NC_015731.1 KEGG: nit:NAL212_0699 hypothetical protein; hypothetical protein 3356050 10935277 Nit79A3_3171 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696305.1 3355844 D 261292 CDS YP_004696306.1 339484520 10935278 complement(3356064..3356513) 1 NC_015731.1 KEGG: nit:NAL212_0698 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding; single-strand binding protein 3356513 10935278 Nit79A3_3172 Nitrosomonas sp. Is79A3 single-strand binding protein YP_004696306.1 3356064 R 261292 CDS YP_004696307.1 339484521 10935279 complement(3356514..3357872) 1 NC_015731.1 PFAM: Major facilitator superfamily MFS-1; KEGG: nit:NAL212_0697 major facilitator superfamily MFS_1; major facilitator superfamily protein 3357872 10935279 Nit79A3_3173 Nitrosomonas sp. Is79A3 major facilitator superfamily protein YP_004696307.1 3356514 R 261292 CDS YP_004696308.1 339484522 10935280 3357966..3360785 1 NC_015731.1 TIGRFAM: Excinuclease ABC, A subunit; HAMAP: UvrABC system protein A; KEGG: nit:NAL212_0696 excinuclease ABC, A subunit; PFAM: ABC transporter-like; UvrABC system protein A 3360785 10935280 Nit79A3_3174 Nitrosomonas sp. Is79A3 UvrABC system protein A YP_004696308.1 3357966 D 261292 CDS YP_004696309.1 339484523 10935281 3360782..3362053 1 NC_015731.1 PFAM: MOFRL; KEGG: nit:NAL212_0695 hydroxypyruvate reductase; MOFRL domain-containing protein 3362053 10935281 Nit79A3_3175 Nitrosomonas sp. Is79A3 MOFRL domain-containing protein YP_004696309.1 3360782 D 261292 CDS YP_004696310.1 339484524 10935282 complement(3362043..3362609) 1 NC_015731.1 manually curated; KEGG: nit:NAL212_0694 hypothetical protein; hypothetical protein 3362609 10935282 Nit79A3_3176 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696310.1 3362043 R 261292 CDS YP_004696311.1 339484525 10935283 complement(3362617..3363063) 1 NC_015731.1 KEGG: nit:NAL212_0693 hypothetical protein; hypothetical protein 3363063 10935283 Nit79A3_3177 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696311.1 3362617 R 261292 CDS YP_004696312.1 339484526 10935284 complement(3363207..3364418) 1 NC_015731.1 PFAM: Porin, Gram-negative type; KEGG: nit:NAL212_0692 porin; porin 3364418 10935284 Nit79A3_3178 Nitrosomonas sp. Is79A3 porin YP_004696312.1 3363207 R 261292 CDS YP_004696313.1 339484527 10935285 3365258..3366250 1 NC_015731.1 PFAM: YkuD domain; KEGG: nit:NAL212_0691 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 3366250 10935285 Nit79A3_3179 Nitrosomonas sp. Is79A3 ErfK/YbiS/YcfS/YnhG family protein YP_004696313.1 3365258 D 261292 CDS YP_004696314.1 339484528 10935286 complement(3366355..3366645) 1 NC_015731.1 KEGG: nit:NAL212_0690 hypothetical protein; hypothetical protein 3366645 10935286 Nit79A3_3180 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696314.1 3366355 R 261292 CDS YP_004696315.1 339484529 10935288 complement(3368509..3369015) 1 NC_015731.1 PFAM: YkuD domain; KEGG: nit:NAL212_0689 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 3369015 10935288 Nit79A3_3182 Nitrosomonas sp. Is79A3 ErfK/YbiS/YcfS/YnhG family protein YP_004696315.1 3368509 R 261292 CDS YP_004696316.1 339484530 10935289 3369158..3369403 1 NC_015731.1 KEGG: gca:Galf_1570 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC; hydrogenase assembly chaperone hypC/hupF 3369403 10935289 Nit79A3_3183 Nitrosomonas sp. Is79A3 hydrogenase assembly chaperone hypC/hupF YP_004696316.1 3369158 D 261292 CDS YP_004696317.1 339484531 10935290 3369414..3370562 1 NC_015731.1 KEGG: dar:Daro_3966 hydrogenase formation HypD protein; TIGRFAM: Hydrogenase formation HypD protein; PFAM: Hydrogenase formation HypD protein; hydrogenase expression/formation protein HypD 3370562 10935290 Nit79A3_3184 Nitrosomonas sp. Is79A3 hydrogenase expression/formation protein HypD YP_004696317.1 3369414 D 261292 CDS YP_004696318.1 339484532 10935291 3370562..3371620 1 NC_015731.1 KEGG: rme:Rmet_1540 hydrogenase expression/formation protein HypE; TIGRFAM: Hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; hydrogenase expression/formation protein HypE 3371620 10935291 Nit79A3_3185 Nitrosomonas sp. Is79A3 hydrogenase expression/formation protein HypE YP_004696318.1 3370562 D 261292 CDS YP_004696319.1 339484533 10935292 3371592..3373331 1 NC_015731.1 PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; Crotonase, core; KEGG: rme:Rmet_1541 formyl transferase-like protein; formyl transferase domain-containing protein 3373331 10935292 Nit79A3_3186 Nitrosomonas sp. Is79A3 formyl transferase domain-containing protein YP_004696319.1 3371592 D 261292 CDS YP_004696320.1 339484534 10935293 complement(3373360..3373803) 1 NC_015731.1 KEGG: nit:NAL212_0688 hypothetical protein; hypothetical protein 3373803 10935293 Nit79A3_3187 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696320.1 3373360 R 261292 CDS YP_004696321.1 339484535 10935294 complement(3374265..3374819) 1 NC_015731.1 KEGG: nit:NAL212_1338 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 3374819 10935294 Nit79A3_3188 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004696321.1 3374265 R 261292 CDS YP_004696322.1 339484536 10935295 3375314..3376555 1 NC_015731.1 KEGG: nit:NAL212_0687 TraB family protein; TIGRFAM: Pheromone shutdown, TraB; PFAM: Pheromone shutdown-related, TraB; TraB family protein 3376555 10935295 Nit79A3_3189 Nitrosomonas sp. Is79A3 TraB family protein YP_004696322.1 3375314 D 261292 CDS YP_004696323.1 339484537 10935296 3376562..3378412 1 NC_015731.1 KEGG: nit:NAL212_0686 xenobiotic-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 3378412 10935296 Nit79A3_3190 Nitrosomonas sp. Is79A3 ABC transporter YP_004696323.1 3376562 D 261292 CDS YP_004696324.1 339484538 10935297 3379075..3379599 1 NC_015731.1 KEGG: nit:NAL212_0684 hypothetical protein; hypothetical protein 3379599 10935297 Nit79A3_3191 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696324.1 3379075 D 261292 CDS YP_004696325.1 339484539 10935298 3379907..3381919 1 NC_015731.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: nit:NAL212_0685 TonB-dependent receptor; TonB-dependent receptor 3381919 10935298 Nit79A3_3192 Nitrosomonas sp. Is79A3 TonB-dependent receptor YP_004696325.1 3379907 D 261292 CDS YP_004696326.1 339484540 10935299 3381990..3382586 1 NC_015731.1 KEGG: nit:NAL212_0684 hypothetical protein; hypothetical protein 3382586 10935299 Nit79A3_3193 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696326.1 3381990 D 261292 CDS YP_004696327.1 339484541 10935300 3382586..3385351 1 NC_015731.1 KEGG: nit:NAL212_0683 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; multi-sensor hybrid histidine kinase 3385351 10935300 Nit79A3_3194 Nitrosomonas sp. Is79A3 multi-sensor hybrid histidine kinase YP_004696327.1 3382586 D 261292 CDS YP_004696328.1 339484542 10935301 3385348..3387468 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: tbd:Tbd_1269 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase/phosphodiesterase 3387468 10935301 Nit79A3_3195 Nitrosomonas sp. Is79A3 response regulator receiver modulated diguanylate cyclase/phosphodiesterase YP_004696328.1 3385348 D 261292 CDS YP_004696329.1 339484543 10935302 3387455..3389392 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Metal-dependent hydrolase HDOD; Signal transduction response regulator, receiver region; KEGG: nit:NAL212_0682 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate cyclase 3389392 10935302 Nit79A3_3196 Nitrosomonas sp. Is79A3 response regulator receiver modulated diguanylate cyclase YP_004696329.1 3387455 D 261292 CDS YP_004696330.1 339484544 10935303 3389560..3391638 1 NC_015731.1 PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: gme:Gmet_1669 TonB-dependent receptor, plug; TonB-dependent receptor plug 3391638 10935303 Nit79A3_3197 Nitrosomonas sp. Is79A3 TonB-dependent receptor plug YP_004696330.1 3389560 D 261292 CDS YP_004696331.1 339484545 10935304 3391654..3392229 1 NC_015731.1 KEGG: nit:NAL212_0684 hypothetical protein; hypothetical protein 3392229 10935304 Nit79A3_3198 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696331.1 3391654 D 261292 CDS YP_004696332.1 339484546 10935305 3392394..3393524 1 NC_015731.1 PFAM: TonB-dependent receptor, plug; KEGG: gme:Gmet_1669 TonB-dependent receptor, plug; TonB-dependent receptor plug 3393524 10935305 Nit79A3_3199 Nitrosomonas sp. Is79A3 TonB-dependent receptor plug YP_004696332.1 3392394 D 261292 CDS YP_004696333.1 339484547 10935306 3393521..3395641 1 NC_015731.1 PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: gme:Gmet_1669 TonB-dependent receptor, plug; TonB-dependent receptor plug 3395641 10935306 Nit79A3_3200 Nitrosomonas sp. Is79A3 TonB-dependent receptor plug YP_004696333.1 3393521 D 261292 CDS YP_004696334.1 339484548 10935307 3395641..3396237 1 NC_015731.1 KEGG: nit:NAL212_0684 hypothetical protein; hypothetical protein 3396237 10935307 Nit79A3_3201 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696334.1 3395641 D 261292 CDS YP_004696335.1 339484549 10935308 3396522..3397403 1 NC_015731.1 KEGG: nit:NAL212_1623 hypothetical protein; hypothetical protein 3397403 10935308 Nit79A3_3202 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696335.1 3396522 D 261292 CDS YP_004696336.1 339484550 10935309 complement(3397457..3399103) 1 NC_015731.1 KEGG: rfr:Rfer_0477 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver region; Tetratricopeptide TPR-4; Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Signal transduction response regulator, receiver region; Tetratricopeptide repeat; response regulator receiver protein 3399103 10935309 Nit79A3_3203 Nitrosomonas sp. Is79A3 response regulator receiver protein YP_004696336.1 3397457 R 261292 CDS YP_004696337.1 339484551 10935310 complement(3399126..3399833) 1 NC_015731.1 KEGG: rfr:Rfer_0478 histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; histidine kinase 3399833 10935310 Nit79A3_3204 Nitrosomonas sp. Is79A3 histidine kinase YP_004696337.1 3399126 R 261292 CDS YP_004696338.1 339484552 10935311 complement(3399941..3400729) 1 NC_015731.1 PFAM: Protein of unknown function DUF2063; KEGG: nhl:Nhal_2720 hypothetical protein; hypothetical protein 3400729 10935311 Nit79A3_3205 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696338.1 3399941 R 261292 CDS YP_004696339.1 339484553 10935312 complement(3400707..3401564) 1 NC_015731.1 KEGG: nit:NAL212_0680 hypothetical protein; HAMAP: UPF0276 protein; PFAM: Protein of unknown function DUF692; hypothetical protein 3401564 10935312 Nit79A3_3206 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696339.1 3400707 R 261292 CDS YP_004696340.1 339484554 10935313 complement(3401577..3401912) 1 NC_015731.1 KEGG: nit:NAL212_0679 hypothetical protein; hypothetical protein 3401912 10935313 Nit79A3_3207 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696340.1 3401577 R 261292 CDS YP_004696341.1 339484555 10935314 3402187..3402909 1 NC_015731.1 KEGG: nit:NAL212_0678 hypothetical protein; hypothetical protein 3402909 10935314 Nit79A3_3208 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696341.1 3402187 D 261292 CDS YP_004696342.1 339484556 10935315 3403170..3404708 1 NC_015731.1 manually curated; TIGRFAM: Flagellin assembly, membrane protein MviN; KEGG: nit:NAL212_0677 integral membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN; integral membrane protein MviN 3404708 10935315 Nit79A3_3209 Nitrosomonas sp. Is79A3 integral membrane protein MviN YP_004696342.1 3403170 D 261292 CDS YP_004696343.1 339484557 10935316 complement(3404723..3405529) 1 NC_015731.1 KEGG: nit:NAL212_2662 hypothetical protein; TIGRFAM: Protein of unknown function DUF198; PFAM: Protein of unknown function DUF198; hypothetical protein 3405529 10935316 Nit79A3_3210 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696343.1 3404723 R 261292 CDS YP_004696344.1 339484558 10935317 complement(3405633..3407477) 1 NC_015731.1 TIGRFAM: Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; KEGG: nit:NAL212_2663 deoxyxylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; Transketolase, C-terminal; 1-deoxy-D-xylulose-5-phosphate synthase 3407477 10935317 Nit79A3_3211 Nitrosomonas sp. Is79A3 1-deoxy-D-xylulose-5-phosphate synthase YP_004696344.1 3405633 R 261292 CDS YP_004696345.1 339484559 10935318 complement(3407514..3408407) 1 NC_015731.1 PFAM: Polyprenyl synthetase; KEGG: nit:NAL212_2664 geranyltranstransferase; polyprenyl synthetase 3408407 10935318 Nit79A3_3212 Nitrosomonas sp. Is79A3 polyprenyl synthetase YP_004696345.1 3407514 R 261292 CDS YP_004696346.1 339484560 10935319 complement(3408397..3408648) 1 NC_015731.1 TIGRFAM: Exonuclease VII, small subunit; HAMAP: Exonuclease VII, small subunit; KEGG: nit:NAL212_2665 exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; Exodeoxyribonuclease 7 small subunit 3408648 10935319 Nit79A3_3213 Nitrosomonas sp. Is79A3 Exodeoxyribonuclease 7 small subunit YP_004696346.1 3408397 R 261292 CDS YP_004696347.1 339484561 10935320 3409134..3409619 1 NC_015731.1 KEGG: nit:NAL212_2666 hypothetical protein; hypothetical protein 3409619 10935320 Nit79A3_3214 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696347.1 3409134 D 261292 CDS YP_004696348.1 339484562 10935321 3409898..3411049 1 NC_015731.1 KEGG: nit:NAL212_2667 hypothetical protein; hypothetical protein 3411049 10935321 Nit79A3_3215 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696348.1 3409898 D 261292 CDS YP_004696349.1 339484563 10935322 3411046..3411891 1 NC_015731.1 KEGG: nit:NAL212_2668 hypothetical protein; hypothetical protein 3411891 10935322 Nit79A3_3216 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696349.1 3411046 D 261292 CDS YP_004696350.1 339484564 10935323 3411955..3413031 1 NC_015731.1 PFAM: Permease YjgP/YjgQ, predicted; KEGG: nit:NAL212_2669 permease YjgP/YjgQ family protein; permease YjgP/YjgQ family protein 3413031 10935323 Nit79A3_3217 Nitrosomonas sp. Is79A3 permease YjgP/YjgQ family protein YP_004696350.1 3411955 D 261292 CDS YP_004696351.1 339484565 10935324 3413028..3414089 1 NC_015731.1 PFAM: Permease YjgP/YjgQ, predicted; KEGG: nit:NAL212_2670 permease YjgP/YjgQ family protein; permease YjgP/YjgQ family protein 3414089 10935324 Nit79A3_3218 Nitrosomonas sp. Is79A3 permease YjgP/YjgQ family protein YP_004696351.1 3413028 D 261292 CDS YP_004696352.1 339484566 10935325 3414212..3415450 1 NC_015731.1 KEGG: nit:NAL212_2671 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 3415450 10935325 Nit79A3_3219 Nitrosomonas sp. Is79A3 CDP-alcohol phosphatidyltransferase YP_004696352.1 3414212 D 261292 CDS YP_004696353.1 339484567 10935326 3415471..3417465 1 NC_015731.1 PFAM: Diacylglycerol kinase, catalytic region; KEGG: nit:NAL212_2672 diacylglycerol kinase catalytic region; diacylglycerol kinase catalytic region 3417465 10935326 Nit79A3_3220 Nitrosomonas sp. Is79A3 diacylglycerol kinase catalytic region YP_004696353.1 3415471 D 261292 CDS YP_004696354.1 339484568 10935327 3417537..3418181 1 NC_015731.1 KEGG: nit:NAL212_2673 hypothetical protein; hypothetical protein 3418181 10935327 Nit79A3_3221 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696354.1 3417537 D 261292 CDS YP_004696355.1 339484569 10935328 3418321..3418857 1 NC_015731.1 PFAM: YaeQ; KEGG: nit:NAL212_2674 YaeQ family protein; YaeQ family protein 3418857 10935328 Nit79A3_3222 Nitrosomonas sp. Is79A3 YaeQ family protein YP_004696355.1 3418321 D 261292 CDS YP_004696356.1 339484570 10935329 complement(3419040..3419996) 1 NC_015731.1 hypothetical protein 3419996 10935329 Nit79A3_3223 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696356.1 3419040 R 261292 CDS YP_004696357.1 339484571 10935330 complement(3420133..3420501) 1 NC_015731.1 KEGG: nit:NAL212_2676 hypothetical protein; hypothetical protein 3420501 10935330 Nit79A3_3224 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696357.1 3420133 R 261292 CDS YP_004696358.1 339484572 10935331 3420984..3421631 1 NC_015731.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: nit:NAL212_2677 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 3421631 10935331 Nit79A3_3225 Nitrosomonas sp. Is79A3 MotA/TolQ/ExbB proton channel YP_004696358.1 3420984 D 261292 CDS YP_004696359.1 339484573 10935332 3421618..3422019 1 NC_015731.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: nit:NAL212_2678 biopolymer transport protein ExbD/TolR; Biopolymer transport protein ExbD/TolR 3422019 10935332 Nit79A3_3226 Nitrosomonas sp. Is79A3 Biopolymer transport protein ExbD/TolR YP_004696359.1 3421618 D 261292 CDS YP_004696360.1 339484574 10935333 3422031..3422906 1 NC_015731.1 KEGG: nit:NAL212_2679 hypothetical protein; hypothetical protein 3422906 10935333 Nit79A3_3227 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696360.1 3422031 D 261292 CDS YP_004696361.1 339484575 10935334 complement(3422918..3423433) 1 NC_015731.1 KEGG: nit:NAL212_2686 hypothetical protein; hypothetical protein 3423433 10935334 Nit79A3_3228 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696361.1 3422918 R 261292 CDS YP_004696362.1 339484576 10935335 complement(3423430..3424032) 1 NC_015731.1 PFAM: Glycoside hydrolase, family 19, catalytic; KEGG: nit:NAL212_2687 glycoside hydrolase 19; glycoside hydrolase 19 3424032 10935335 Nit79A3_3229 Nitrosomonas sp. Is79A3 glycoside hydrolase 19 YP_004696362.1 3423430 R 261292 CDS YP_004696363.1 339484577 10935336 3424133..3425926 1 NC_015731.1 TIGRFAM: DNA mismatch repair protein, N-terminal; HAMAP: DNA mismatch repair protein mutL; KEGG: nit:NAL212_2688 DNA mismatch repair protein MutL; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATP-binding region, ATPase-like; DNA mismatch repair protein mutL 3425926 10935336 Nit79A3_3230 Nitrosomonas sp. Is79A3 DNA mismatch repair protein mutL YP_004696363.1 3424133 D 261292 CDS YP_004696364.1 339484578 10935337 3426043..3427449 1 NC_015731.1 KEGG: ttu:TERTU_4249 hypothetical protein; hypothetical protein 3427449 10935337 Nit79A3_3231 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696364.1 3426043 D 261292 CDS YP_004696365.1 339484579 10935338 complement(3427583..3428413) 1 NC_015731.1 KEGG: nit:NAL212_2939 hypothetical protein; HAMAP: Protein of unknown function DUF299, phosphotransferase, predicted; PFAM: Protein of unknown function DUF299, phosphotransferase, predicted; phosphotransferase ydiA 3428413 10935338 Nit79A3_3232 Nitrosomonas sp. Is79A3 phosphotransferase ydiA YP_004696365.1 3427583 R 261292 CDS YP_004696366.1 339484580 10935339 complement(3428410..3430788) 1 NC_015731.1 KEGG: nit:NAL212_2940 phosphoenolpyruvate synthase; TIGRFAM: Phosphoenolpyruvate synthase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; PEP-utilising enzyme; phosphoenolpyruvate synthase 3430788 10935339 Nit79A3_3233 Nitrosomonas sp. Is79A3 phosphoenolpyruvate synthase YP_004696366.1 3428410 R 261292 CDS YP_004696367.1 339484581 10935340 complement(3430821..3431774) 1 NC_015731.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nit:NAL212_2941 transcriptional regulator, LysR family; LysR family transcriptional regulator 3431774 10935340 Nit79A3_3234 Nitrosomonas sp. Is79A3 LysR family transcriptional regulator YP_004696367.1 3430821 R 261292 CDS YP_004696368.1 339484582 10935341 3431952..3433427 1 NC_015731.1 KEGG: nit:NAL212_2942 ribulose-bisphosphate carboxylase; HAMAP: Ribulose bisphosphate carboxylase large chain; PFAM: Ribulose bisphosphate carboxylase, large subunit, C-terminal; Ribulose bisphosphate carboxylase, large subunit, N-terminal; Ribulose bisphosphate carboxylase large chain 3433427 10935341 Nit79A3_3235 Nitrosomonas sp. Is79A3 Ribulose bisphosphate carboxylase large chain YP_004696368.1 3431952 D 261292 CDS YP_004696369.1 339484583 10935342 3433448..3433882 1 NC_015731.1 PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: nit:NAL212_2943 ribulose-bisphosphate carboxylase; ribulose bisphosphate carboxylase small chain 3433882 10935342 Nit79A3_3236 Nitrosomonas sp. Is79A3 ribulose bisphosphate carboxylase small chain YP_004696369.1 3433448 D 261292 CDS YP_004696370.1 339484584 10935343 3434048..3434989 1 NC_015731.1 TIGRFAM: CbxX/CfqX, monofunctional; PFAM: ATPase, AAA-type, core; KEGG: nit:NAL212_2944 CbbX protein; SMART: ATPase, AAA+ type, core; CbbX protein 3434989 10935343 Nit79A3_3237 Nitrosomonas sp. Is79A3 CbbX protein YP_004696370.1 3434048 D 261292 CDS YP_004696371.1 339484585 10935344 3435016..3435360 1 NC_015731.1 KEGG: nit:NAL212_2945 hypothetical protein; hypothetical protein 3435360 10935344 Nit79A3_3238 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696371.1 3435016 D 261292 CDS YP_004696372.1 339484586 10935345 3435399..3436619 1 NC_015731.1 KEGG: nit:NAL212_2946 ketose-bisphosphate aldolase; TIGRFAM: Ketose-bisphosphate aldolase, class-II; PFAM: Ketose-bisphosphate aldolase, class-II; ketose-bisphosphate aldolase 3436619 10935345 Nit79A3_3239 Nitrosomonas sp. Is79A3 ketose-bisphosphate aldolase YP_004696372.1 3435399 D 261292 CDS YP_004696373.1 339484587 10935346 complement(3436718..3437413) 1 NC_015731.1 KEGG: mpo:Mpop_2666 peptidoglycan-binding domain 1 protein; TIGRFAM: Conserved hypothetical protein CHP02594; PFAM: Peptidoglycan binding-like; hypothetical protein 3437413 10935346 Nit79A3_3240 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696373.1 3436718 R 261292 CDS YP_004696374.1 339484588 10935347 complement(3437504..3442093) 1 NC_015731.1 KEGG: nit:NAL212_0414 CheA signal transduction histidine kinase; PFAM: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; CheW-like protein; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; CheW-like protein; CheA signal transduction histidine kinase 3442093 10935347 Nit79A3_3241 Nitrosomonas sp. Is79A3 CheA signal transduction histidine kinase YP_004696374.1 3437504 R 261292 CDS YP_004696375.1 339484589 10935348 complement(3442135..3444243) 1 NC_015731.1 KEGG: nit:NAL212_0413 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; methyl-accepting chemotaxis sensory transducer 3444243 10935348 Nit79A3_3242 Nitrosomonas sp. Is79A3 methyl-accepting chemotaxis sensory transducer YP_004696375.1 3442135 R 261292 CDS YP_004696376.1 339484590 10935349 complement(3444516..3446027) 1 NC_015731.1 KEGG: nit:NAL212_0412 threonine dehydratase, biosynthetic; TIGRFAM: Threonine dehydratase I; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal; threonine dehydratase 3446027 10935349 Nit79A3_3243 Nitrosomonas sp. Is79A3 threonine dehydratase YP_004696376.1 3444516 R 261292 CDS YP_004696377.1 339484591 10935350 3446260..3446550 1 NC_015731.1 PFAM: Nucleotidyltransferase; KEGG: nhl:Nhal_0891 DNA polymerase beta domain protein region; DNA polymerase beta domain-containing protein 3446550 10935350 Nit79A3_3244 Nitrosomonas sp. Is79A3 DNA polymerase beta domain-containing protein YP_004696377.1 3446260 D 261292 CDS YP_004696378.1 339484592 10935351 3446543..3446899 1 NC_015731.1 PFAM: Protein of unknown function DUF86; KEGG: nhl:Nhal_0890 protein of unknown function DUF86; hypothetical protein 3446899 10935351 Nit79A3_3245 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696378.1 3446543 D 261292 CDS YP_004696379.1 339484593 10935352 3446991..3447287 1 NC_015731.1 hypothetical protein 3447287 10935352 Nit79A3_3246 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696379.1 3446991 D 261292 CDS YP_004696380.1 339484594 10935353 complement(3447290..3448324) 1 NC_015731.1 KEGG: dia:Dtpsy_2525 isxo7 transposase; isxo7 transposase 3448324 10935353 Nit79A3_3247 Nitrosomonas sp. Is79A3 isxo7 transposase YP_004696380.1 3447290 R 261292 CDS YP_004696381.1 339484595 10935354 3448336..3449052 1 NC_015731.1 hypothetical protein 3449052 10935354 Nit79A3_3248 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696381.1 3448336 D 261292 CDS YP_004696382.1 339484596 10935355 complement(3449064..3450497) 1 NC_015731.1 PFAM: Exonuclease C-terminal; Exonuclease, RNase T/DNA polymerase III; KEGG: nit:NAL212_2927 exodeoxyribonuclease I; exonuclease 3450497 10935355 Nit79A3_3249 Nitrosomonas sp. Is79A3 exonuclease YP_004696382.1 3449064 R 261292 CDS YP_004696383.1 339484597 10935356 3450615..3451004 1 NC_015731.1 PFAM: Endoribonuclease L-PSP; KEGG: nit:NAL212_2926 endoribonuclease L-PSP; endoribonuclease L-PSP 3451004 10935356 Nit79A3_3250 Nitrosomonas sp. Is79A3 endoribonuclease L-PSP YP_004696383.1 3450615 D 261292 CDS YP_004696384.1 339484598 10935357 complement(3451144..3451986) 1 NC_015731.1 KEGG: nit:NAL212_2925 hypothetical protein; hypothetical protein 3451986 10935357 Nit79A3_3251 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696384.1 3451144 R 261292 CDS YP_004696385.1 339484599 10935358 complement(3452026..3452409) 1 NC_015731.1 PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal; KEGG: nit:NAL212_2924 type II secretion system protein G; type II secretion system protein G 3452409 10935358 Nit79A3_3252 Nitrosomonas sp. Is79A3 type II secretion system protein G YP_004696385.1 3452026 R 261292 CDS YP_004696386.1 339484600 10935359 complement(3452415..3452927) 1 NC_015731.1 KEGG: nit:NAL212_2923 general secretion pathway GspG related transmembrane protein; general secretion pathway GspG related transmembrane protein 3452927 10935359 Nit79A3_3253 Nitrosomonas sp. Is79A3 general secretion pathway GspG related transmembrane protein YP_004696386.1 3452415 R 261292 CDS YP_004696387.1 339484601 10935360 complement(3452935..3455220) 1 NC_015731.1 PFAM: Type II/III secretion system; Secretin/TonB, short N-terminal; NolW-like; KEGG: nit:NAL212_2922 type II and III secretion system protein; type II and III secretion system protein 3455220 10935360 Nit79A3_3254 Nitrosomonas sp. Is79A3 type II and III secretion system protein YP_004696387.1 3452935 R 261292 CDS YP_004696388.1 339484602 10935361 complement(3455217..3455777) 1 NC_015731.1 KEGG: nit:NAL212_2921 prolin-rich transmembrane protein; prolin-rich transmembrane protein 3455777 10935361 Nit79A3_3255 Nitrosomonas sp. Is79A3 prolin-rich transmembrane protein YP_004696388.1 3455217 R 261292 CDS YP_004696389.1 339484603 10935362 complement(3455783..3456379) 1 NC_015731.1 KEGG: nit:NAL212_2920 transmembrane protein; transmembrane protein 3456379 10935362 Nit79A3_3256 Nitrosomonas sp. Is79A3 transmembrane protein YP_004696389.1 3455783 R 261292 CDS YP_004696390.1 339484604 10935363 complement(3456361..3456912) 1 NC_015731.1 KEGG: nit:NAL212_2919 fimbrial assembly family protein; fimbrial assembly family protein 3456912 10935363 Nit79A3_3257 Nitrosomonas sp. Is79A3 fimbrial assembly family protein YP_004696390.1 3456361 R 261292 CDS YP_004696391.1 339484605 10935364 complement(3456900..3457733) 1 NC_015731.1 KEGG: nit:NAL212_2918 hypothetical protein; hypothetical protein 3457733 10935364 Nit79A3_3258 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696391.1 3456900 R 261292 CDS YP_004696392.1 339484606 10935365 complement(3457714..3459405) 1 NC_015731.1 PFAM: Type II secretion system protein E; KEGG: nit:NAL212_2917 type II secretion system protein E; type II secretion system protein E 3459405 10935365 Nit79A3_3259 Nitrosomonas sp. Is79A3 type II secretion system protein E YP_004696392.1 3457714 R 261292 CDS YP_004696393.1 339484607 10935366 complement(3459402..3460586) 1 NC_015731.1 PFAM: Type II secretion system F domain; KEGG: nit:NAL212_2916 type II secretion system F domain; Type II secretion system F domain-containing protein 3460586 10935366 Nit79A3_3260 Nitrosomonas sp. Is79A3 Type II secretion system F domain-containing protein YP_004696393.1 3459402 R 261292 CDS YP_004696394.1 339484608 10935367 complement(3460596..3461030) 1 NC_015731.1 KEGG: nit:NAL212_2915 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal; general secretion pathway protein G 3461030 10935367 Nit79A3_3261 Nitrosomonas sp. Is79A3 general secretion pathway protein G YP_004696394.1 3460596 R 261292 CDS YP_004696395.1 339484609 10935368 complement(3461180..3461863) 1 NC_015731.1 PFAM: Peptidase, membrane zinc metallopeptidase, KEGG: nit:NAL212_2914 peptidase membrane zinc metallopeptidase; peptidase membrane zinc metallopeptidase 3461863 10935368 Nit79A3_3262 Nitrosomonas sp. Is79A3 peptidase membrane zinc metallopeptidase YP_004696395.1 3461180 R 261292 CDS YP_004696396.1 339484610 10935369 3462727..3466767 1 NC_015731.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; MASE1; PAS fold-4; PAS fold-3; PAS fold; Signal transduction response regulator, receiver region; KEGG: shl:Shal_0720 multi-sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS; Signal transduction response regulator, receiver region; multi-sensor hybrid histidine kinase 3466767 10935369 Nit79A3_3263 Nitrosomonas sp. Is79A3 multi-sensor hybrid histidine kinase YP_004696396.1 3462727 D 261292 CDS YP_004696397.1 339484611 10935370 3466810..3467040 1 NC_015731.1 PFAM: SirA-like; KEGG: nit:NAL212_2870 SirA-like domain-containing protein; SirA-like domain-containing protein 3467040 10935370 Nit79A3_3264 Nitrosomonas sp. Is79A3 SirA-like domain-containing protein YP_004696397.1 3466810 D 261292 CDS YP_004696398.1 339484612 10935371 complement(3467234..3468592) 1 NC_015731.1 PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: nit:NAL212_3080 peptidase U62 modulator of DNA gyrase; peptidase U62 3468592 10935371 Nit79A3_3265 Nitrosomonas sp. Is79A3 peptidase U62 YP_004696398.1 3467234 R 261292 CDS YP_004696399.1 339484613 10935372 3468726..3469238 1 NC_015731.1 KEGG: nit:NAL212_3079 hypothetical protein; HAMAP: UPF0307 protein yjgA; PFAM: Uncharacterised protein family UPF0307; hypothetical protein 3469238 10935372 Nit79A3_3266 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696399.1 3468726 D 261292 CDS YP_004696400.1 339484614 10935373 3469418..3469945 1 NC_015731.1 hypothetical protein 3469945 10935373 Nit79A3_3267 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696400.1 3469418 D 261292 CDS YP_004696401.1 339484615 10935374 3470329..3471378 1 NC_015731.1 KEGG: nit:NAL212_3093 hypothetical protein; hypothetical protein 3471378 10935374 Nit79A3_3268 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696401.1 3470329 D 261292 CDS YP_004696402.1 339484616 10935375 complement(3471483..3472886) 1 NC_015731.1 PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: ddr:Deide_01740 peptidase S8/S53 subtilisin kexin sedolisin; peptidase S8 and S53 subtilisin kexin sedolisin 3472886 10935375 Nit79A3_3269 Nitrosomonas sp. Is79A3 peptidase S8 and S53 subtilisin kexin sedolisin YP_004696402.1 3471483 R 261292 CDS YP_004696403.1 339484617 10935376 complement(3473021..3473494) 1 NC_015731.1 PFAM: Ion transport 2; KEGG: nit:NAL212_0194 ion transport 2 domain-containing protein; Ion transport 2 domain-containing protein 3473494 10935376 Nit79A3_3270 Nitrosomonas sp. Is79A3 Ion transport 2 domain-containing protein YP_004696403.1 3473021 R 261292 CDS YP_004696404.1 339484618 10935377 3473665..3474477 1 NC_015731.1 KEGG: nit:NAL212_0193 hypothetical protein; hypothetical protein 3474477 10935377 Nit79A3_3271 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696404.1 3473665 D 261292 CDS YP_004696405.1 339484619 10935378 complement(3474523..3478692) 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; MASE1; PAS fold-3; PAS fold-4; KEGG: nit:NAL212_0894 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAC motif; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3478692 10935378 Nit79A3_3272 Nitrosomonas sp. Is79A3 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004696405.1 3474523 R 261292 CDS YP_004696406.1 339484620 10935379 3478949..3479077 1 NC_015731.1 hypothetical protein 3479077 10935379 Nit79A3_3273 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696406.1 3478949 D 261292 CDS YP_004696407.1 339484621 10935380 complement(3479055..3480791) 1 NC_015731.1 KEGG: nit:NAL212_2971 xenobiotic-transporting ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; ABC transporter 3480791 10935380 Nit79A3_3274 Nitrosomonas sp. Is79A3 ABC transporter YP_004696407.1 3479055 R 261292 CDS YP_004696408.1 339484622 10935381 complement(3480842..3481531) 1 NC_015731.1 TIGRFAM: Lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter-like; KEGG: nit:NAL212_2970 lipoprotein releasing system, ATP-binding protein; SMART: ATPase, AAA+ type, core; lipoprotein releasing system, ATP-binding protein 3481531 10935381 Nit79A3_3275 Nitrosomonas sp. Is79A3 lipoprotein releasing system, ATP-binding protein YP_004696408.1 3480842 R 261292 CDS YP_004696409.1 339484623 10935382 complement(3481524..3482771) 1 NC_015731.1 KEGG: nit:NAL212_2969 lipoprotein releasing system, transmembrane protein, LolC/E family; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Protein of unknown function DUF214, permase predicted; lipoprotein releasing system, transmembrane protein, LolC/E family 3482771 10935382 Nit79A3_3276 Nitrosomonas sp. Is79A3 lipoprotein releasing system, transmembrane protein, LolC/E family YP_004696409.1 3481524 R 261292 CDS YP_004696410.1 339484624 10935383 complement(3482881..3483600) 1 NC_015731.1 KEGG: nit:NAL212_2968 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; Crp/Fnr family transcriptional regulator 3483600 10935383 Nit79A3_3277 Nitrosomonas sp. Is79A3 Crp/Fnr family transcriptional regulator YP_004696410.1 3482881 R 261292 CDS YP_004696411.1 339484625 10935384 3483853..3485262 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: nit:NAL212_2951 transposase IS4 family protein; transposase IS4 family protein 3485262 10935384 Nit79A3_3278 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004696411.1 3483853 D 261292 CDS YP_004696412.1 339484626 10935385 3485418..3486071 1 NC_015731.1 KEGG: sbm:Shew185_3408 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver 3486071 10935385 Nit79A3_3279 Nitrosomonas sp. Is79A3 response regulator receiver YP_004696412.1 3485418 D 261292 CDS YP_004696413.1 339484627 10935386 complement(3486088..3486591) 1 NC_015731.1 KEGG: nit:NAL212_2967 rare lipoprotein A; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Rare lipoprotein A; rare lipoprotein A 3486591 10935386 Nit79A3_3280 Nitrosomonas sp. Is79A3 rare lipoprotein A YP_004696413.1 3486088 R 261292 CDS YP_004696414.1 339484628 10935388 complement(3486983..3488038) 1 NC_015731.1 PFAM: Secretion protein HlyD; KEGG: nit:NAL212_0608 secretion protein HlyD family protein; secretion protein HlyD family protein 3488038 10935388 Nit79A3_3282 Nitrosomonas sp. Is79A3 secretion protein HlyD family protein YP_004696414.1 3486983 R 261292 CDS YP_004696415.1 339484629 10935389 complement(3488022..3490205) 1 NC_015731.1 KEGG: nit:NAL212_0609 hypothetical protein; hypothetical protein 3490205 10935389 Nit79A3_3283 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696415.1 3488022 R 261292 CDS YP_004696416.1 339484630 10935390 complement(3490202..3491530) 1 NC_015731.1 PFAM: Glycosyl transferase, family 2; KEGG: nit:NAL212_0610 glycosyl transferase 2; glycosyl transferase 2 3491530 10935390 Nit79A3_3284 Nitrosomonas sp. Is79A3 glycosyl transferase 2 YP_004696416.1 3490202 R 261292 CDS YP_004696417.1 339484631 10935391 complement(3491534..3492961) 1 NC_015731.1 KEGG: nit:NAL212_0611 hypothetical protein; hypothetical protein 3492961 10935391 Nit79A3_3285 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696417.1 3491534 R 261292 CDS YP_004696418.1 339484632 10935393 complement(3494070..3495332) 1 NC_015731.1 PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: nit:NAL212_0833 subtilisin; peptidase S8 and S53 subtilisin kexin sedolisin 3495332 10935393 Nit79A3_3287 Nitrosomonas sp. Is79A3 peptidase S8 and S53 subtilisin kexin sedolisin YP_004696418.1 3494070 R 261292 CDS YP_004696419.1 339484633 10935394 complement(3495342..3496043) 1 NC_015731.1 KEGG: nit:NAL212_0834 hypothetical protein; hypothetical protein 3496043 10935394 Nit79A3_3288 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696419.1 3495342 R 261292 CDS YP_004696420.1 339484634 10935395 complement(3496046..3496648) 1 NC_015731.1 KEGG: nit:NAL212_0835 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 3496648 10935395 Nit79A3_3289 Nitrosomonas sp. Is79A3 ECF subfamily RNA polymerase sigma-24 subunit YP_004696420.1 3496046 R 261292 CDS YP_004696421.1 339484635 10935396 complement(3496756..3497496) 1 NC_015731.1 TIGRFAM: Conserved hypothetical protein CHP02001; KEGG: nit:NAL212_0836 hypothetical protein; hypothetical protein 3497496 10935396 Nit79A3_3290 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696421.1 3496756 R 261292 CDS YP_004696422.1 339484636 10935398 3498021..3498185 1 NC_015731.1 hypothetical protein 3498185 10935398 Nit79A3_3292 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696422.1 3498021 D 261292 CDS YP_004696423.1 339484637 10935399 3498143..3499990 1 NC_015731.1 KEGG: nit:NAL212_2961 multicopper oxidase type 1; multicopper oxidase type 1 3499990 10935399 Nit79A3_3293 Nitrosomonas sp. Is79A3 multicopper oxidase type 1 YP_004696423.1 3498143 D 261292 CDS YP_004696424.1 339484638 10935400 3500075..3500728 1 NC_015731.1 KEGG: nit:NAL212_2960 hypothetical protein; hypothetical protein 3500728 10935400 Nit79A3_3294 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696424.1 3500075 D 261292 CDS YP_004696425.1 339484639 10935401 3500846..3501919 1 NC_015731.1 KEGG: kse:Ksed_21480 hypothetical protein; hypothetical protein 3501919 10935401 Nit79A3_3295 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696425.1 3500846 D 261292 CDS YP_004696426.1 339484640 10935402 3501948..3503684 1 NC_015731.1 KEGG: aar:Acear_0669 ABC transporter; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; ABC transporter 3503684 10935402 Nit79A3_3296 Nitrosomonas sp. Is79A3 ABC transporter YP_004696426.1 3501948 D 261292 CDS YP_004696427.1 339484641 10935403 3503711..3504553 1 NC_015731.1 KEGG: amd:AMED_5380 hypothetical protein; hypothetical protein 3504553 10935403 Nit79A3_3297 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696427.1 3503711 D 261292 CDS YP_004696428.1 339484642 10935404 3504661..3506001 1 NC_015731.1 PFAM: Phosphate-selective porin O/P; KEGG: mei:Msip34_2149 phosphate-selective porin O and P; phosphate-selective porin O and P 3506001 10935404 Nit79A3_3298 Nitrosomonas sp. Is79A3 phosphate-selective porin O and P YP_004696428.1 3504661 D 261292 CDS YP_004696429.1 339484643 10935405 3506157..3506675 1 NC_015731.1 PFAM: Polyketide cyclase/dehydrase; KEGG: nit:NAL212_0676 polyketide cyclase/dehydrase; polyketide cyclase/dehydrase 3506675 10935405 Nit79A3_3299 Nitrosomonas sp. Is79A3 polyketide cyclase/dehydrase YP_004696429.1 3506157 D 261292 CDS YP_004696430.1 339484644 10935406 3506675..3507709 1 NC_015731.1 PFAM: O-methyltransferase, family 2; KEGG: nhl:Nhal_1752 O-methyltransferase 2; O-methyltransferase 2 3507709 10935406 Nit79A3_3300 Nitrosomonas sp. Is79A3 O-methyltransferase 2 YP_004696430.1 3506675 D 261292 CDS YP_004696431.1 339484645 10935407 complement(3507777..3509189) 1 NC_015731.1 PFAM: GTP-binding protein, HSR1-related; KEGG: nit:NAL212_2911 hypothetical protein; GTP-binding protein HSR1-like protein 3509189 10935407 Nit79A3_3301 Nitrosomonas sp. Is79A3 GTP-binding protein HSR1-like protein YP_004696431.1 3507777 R 261292 CDS YP_004696432.1 339484646 10935408 complement(3509193..3510575) 1 NC_015731.1 KEGG: nit:NAL212_2910 hypothetical protein; hypothetical protein 3510575 10935408 Nit79A3_3302 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696432.1 3509193 R 261292 CDS YP_004696433.1 339484647 10935409 3510744..3511445 1 NC_015731.1 PFAM: Glutamine amidotransferase class-I, C-terminal; KEGG: nit:NAL212_2909 glutamine amidotransferase class-I; glutamine amidotransferase class-I 3511445 10935409 Nit79A3_3303 Nitrosomonas sp. Is79A3 glutamine amidotransferase class-I YP_004696433.1 3510744 D 261292 CDS YP_004696434.1 339484648 10935410 complement(3511468..3511728) 1 NC_015731.1 KEGG: neu:NE1352 hypothetical protein; TIGRFAM: Addiction module toxin, Txe/YoeB; PFAM: Addiction module toxin, Txe/YoeB; Txe/YoeB family addiction module toxin 3511728 10935410 Nit79A3_3304 Nitrosomonas sp. Is79A3 Txe/YoeB family addiction module toxin YP_004696434.1 3511468 R 261292 CDS YP_004696435.1 339484649 10935411 complement(3511728..3511970) 1 NC_015731.1 TIGRFAM: Prevent-host-death protein; KEGG: nwa:Nwat_1548 prevent-host-death family protein; prevent-host-death family protein 3511970 10935411 Nit79A3_3305 Nitrosomonas sp. Is79A3 prevent-host-death family protein YP_004696435.1 3511728 R 261292 CDS YP_004696436.1 339484650 10935412 complement(3512083..3514881) 1 NC_015731.1 PFAM: Sulphatase-modifying factor; KEGG: app:CAP2UW1_2305 hypothetical protein; sulfatase-modifying factor protein 3514881 10935412 Nit79A3_3306 Nitrosomonas sp. Is79A3 sulfatase-modifying factor protein YP_004696436.1 3512083 R 261292 CDS YP_004696437.1 339484651 10935413 complement(3515232..3516482) 1 NC_015731.1 KEGG: mca:MCA1289 hypothetical protein; hypothetical protein 3516482 10935413 Nit79A3_3307 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696437.1 3515232 R 261292 CDS YP_004696438.1 339484652 10935414 complement(3516691..3517527) 1 NC_015731.1 KEGG: mme:Marme_2705 hypothetical protein; hypothetical protein 3517527 10935414 Nit79A3_3308 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696438.1 3516691 R 261292 CDS YP_004696439.1 339484653 10935415 complement(3517597..3518607) 1 NC_015731.1 PFAM: Protein of unknown function DUF457, transmembrane; KEGG: nit:NAL212_2873 hypothetical protein; hypothetical protein 3518607 10935415 Nit79A3_3309 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696439.1 3517597 R 261292 CDS YP_004696440.1 339484654 10935416 complement(3518754..3520181) 1 NC_015731.1 KEGG: pat:Patl_2702 alkaline phosphatase; alkaline phosphatase 3520181 10935416 Nit79A3_3310 Nitrosomonas sp. Is79A3 alkaline phosphatase YP_004696440.1 3518754 R 261292 CDS YP_004696441.1 339484655 10935417 3520417..3522969 1 NC_015731.1 KEGG: nit:NAL212_2974 dicarboxylate transport; dicarboxylate transport 3522969 10935417 Nit79A3_3311 Nitrosomonas sp. Is79A3 dicarboxylate transport YP_004696441.1 3520417 D 261292 CDS YP_004696442.1 339484656 10935418 3523071..3523286 1 NC_015731.1 KEGG: nit:NAL212_2973 hypothetical protein; hypothetical protein 3523286 10935418 Nit79A3_3312 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696442.1 3523071 D 261292 CDS YP_004696443.1 339484657 10935419 3523312..3523662 1 NC_015731.1 PFAM: Uncharacterised conserved protein UCP025560; KEGG: nit:NAL212_2972 hypothetical protein; hypothetical protein 3523662 10935419 Nit79A3_3313 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696443.1 3523312 D 261292 CDS YP_004696444.1 339484658 10935420 3523964..3525052 1 NC_015731.1 PFAM: Haemolysin-type calcium-binding region; KEGG: nit:NAL212_0192 hypothetical protein; Hemolysin-type calcium-binding protein 3525052 10935420 Nit79A3_3314 Nitrosomonas sp. Is79A3 Hemolysin-type calcium-binding protein YP_004696444.1 3523964 D 261292 CDS YP_004696445.1 339484659 10935421 complement(3525122..3526354) 1 NC_015731.1 KEGG: nit:NAL212_0191 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; HAMAP: Multifunctional CCA protein; PFAM: Polynucleotide adenylyltransferase region; Metal-dependent phosphohydrolase, HD region, subdomain; polynucleotide adenylyltransferase 3526354 10935421 Nit79A3_3315 Nitrosomonas sp. Is79A3 polynucleotide adenylyltransferase YP_004696445.1 3525122 R 261292 CDS YP_004696446.1 339484660 10935422 complement(3526397..3528313) 1 NC_015731.1 PFAM: Lytic transglycosylase-like, catalytic; KEGG: nit:NAL212_0190 lytic transglycosylase catalytic; lytic transglycosylase 3528313 10935422 Nit79A3_3316 Nitrosomonas sp. Is79A3 lytic transglycosylase YP_004696446.1 3526397 R 261292 CDS YP_004696447.1 339484661 10935423 complement(3528471..3529814) 1 NC_015731.1 PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; KEGG: nit:NAL212_0189 glutamate dehydrogenase (NADP(+)); Glu/Leu/Phe/Val dehydrogenase 3529814 10935423 Nit79A3_3317 Nitrosomonas sp. Is79A3 Glu/Leu/Phe/Val dehydrogenase YP_004696447.1 3528471 R 261292 CDS YP_004696448.1 339484662 10935424 3530244..3534629 1 NC_015731.1 KEGG: see:SNSL254_p_0173 rhs family protein; TIGRFAM: RHS repeat-associated core domain-containing protein; YD repeat; PFAM: YD repeat; RHS repeat-associated core domain-containing protein 3534629 10935424 Nit79A3_3318 Nitrosomonas sp. Is79A3 RHS repeat-associated core domain-containing protein YP_004696448.1 3530244 D 261292 CDS YP_004696449.1 339484663 10935425 3534632..3535135 1 NC_015731.1 KEGG: ecl:EcolC_0116 hypothetical protein; hypothetical protein 3535135 10935425 Nit79A3_3319 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696449.1 3534632 D 261292 CDS YP_004696450.1 339484664 10935427 3535614..3536126 1 NC_015731.1 hypothetical protein 3536126 10935427 Nit79A3_3321 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696450.1 3535614 D 261292 CDS YP_004696451.1 339484665 10935428 3536229..3536546 1 NC_015731.1 hypothetical protein 3536546 10935428 Nit79A3_3322 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696451.1 3536229 D 261292 CDS YP_004696452.1 339484666 10935429 3536543..3537019 1 NC_015731.1 hypothetical protein 3537019 10935429 Nit79A3_3323 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696452.1 3536543 D 261292 CDS YP_004696453.1 339484667 10935430 3537383..3537892 1 NC_015731.1 KEGG: xal:XALc_2110 hypothetical protein; hypothetical protein 3537892 10935430 Nit79A3_3324 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696453.1 3537383 D 261292 CDS YP_004696454.1 339484668 10935431 3537980..3538243 1 NC_015731.1 hypothetical protein 3538243 10935431 Nit79A3_3325 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696454.1 3537980 D 261292 CDS YP_004696455.1 339484669 10935432 3538830..3540038 1 NC_015731.1 KEGG: nit:NAL212_3097 hypothetical protein; hypothetical protein 3540038 10935432 Nit79A3_3326 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696455.1 3538830 D 261292 CDS YP_004696456.1 339484670 10935433 complement(3540688..3542490) 1 NC_015731.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; KEGG: rfr:Rfer_1870 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ; SMART: HAMP linker domain; PAS; ATP-binding region, ATPase-like; multi-sensor signal transduction histidine kinase 3542490 10935433 Nit79A3_3327 Nitrosomonas sp. Is79A3 multi-sensor signal transduction histidine kinase YP_004696456.1 3540688 R 261292 CDS YP_004696457.1 339484671 10935435 3543170..3543679 1 NC_015731.1 KEGG: net:Neut_1845 transmembrane protein; transmembrane protein 3543679 10935435 Nit79A3_3329 Nitrosomonas sp. Is79A3 transmembrane protein YP_004696457.1 3543170 D 261292 CDS YP_004696458.1 339484672 10935436 3543781..3544368 1 NC_015731.1 PFAM: MTH538 TIR-like domain; KEGG: gca:Galf_1431 hypothetical protein; hypothetical protein 3544368 10935436 Nit79A3_3330 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696458.1 3543781 D 261292 CDS YP_004696459.1 339484673 10935437 complement(3544713..3545006) 1 NC_015731.1 KEGG: nit:NAL212_2828 hypothetical protein; hypothetical protein 3545006 10935437 Nit79A3_3331 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696459.1 3544713 R 261292 CDS YP_004696460.1 339484674 10935438 complement(3545283..3545630) 1 NC_015731.1 PFAM: Protein of unknown function DUF488; KEGG: blb:BBMN68_520 protein; hypothetical protein 3545630 10935438 Nit79A3_3332 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696460.1 3545283 R 261292 CDS YP_004696461.1 339484675 10935439 complement(3545627..3545842) 1 NC_015731.1 hypothetical protein 3545842 10935439 Nit79A3_3333 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696461.1 3545627 R 261292 CDS YP_004696462.1 339484676 10935440 complement(3546077..3546196) 1 NC_015731.1 hypothetical protein 3546196 10935440 Nit79A3_3334 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696462.1 3546077 R 261292 CDS YP_004696463.1 339484677 10935441 complement(3546334..3546543) 1 NC_015731.1 KEGG: nit:NAL212_1377 hypothetical protein; hypothetical protein 3546543 10935441 Nit79A3_3335 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696463.1 3546334 R 261292 CDS YP_004696464.1 339484678 10935442 3546880..3547791 1 NC_015731.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nit:NAL212_1375 transcriptional regulator, LysR family; LysR family transcriptional regulator 3547791 10935442 Nit79A3_3336 Nitrosomonas sp. Is79A3 LysR family transcriptional regulator YP_004696464.1 3546880 D 261292 CDS YP_004696465.1 339484679 10935443 3548125..3548583 1 NC_015731.1 KEGG: nit:NAL212_1947 hypothetical protein; hypothetical protein 3548583 10935443 Nit79A3_3337 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696465.1 3548125 D 261292 CDS YP_004696466.1 339484680 10935444 3548918..3550240 1 NC_015731.1 PFAM: Protein of unknown function DUF1597; KEGG: nit:NAL212_2794 hypothetical protein; hypothetical protein 3550240 10935444 Nit79A3_3338 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696466.1 3548918 D 261292 CDS YP_004696467.1 339484681 10935445 3550879..3551541 1 NC_015731.1 PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; KEGG: nit:NAL212_2981 protocatechuate 3,4-dioxygenase; intradiol ring-cleavage dioxygenase 3551541 10935445 Nit79A3_3339 Nitrosomonas sp. Is79A3 intradiol ring-cleavage dioxygenase YP_004696467.1 3550879 D 261292 CDS YP_004696468.1 339484682 10935446 3551545..3552495 1 NC_015731.1 KEGG: nit:NAL212_2980 thioredoxin reductase; TIGRFAM: Thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 3552495 10935446 Nit79A3_3340 Nitrosomonas sp. Is79A3 thioredoxin reductase YP_004696468.1 3551545 D 261292 CDS YP_004696469.1 339484683 10935447 3552552..3553100 1 NC_015731.1 KEGG: nit:NAL212_2979 Smr protein/MutS2; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal; Smr protein/MutS2 3553100 10935447 Nit79A3_3341 Nitrosomonas sp. Is79A3 Smr protein/MutS2 YP_004696469.1 3552552 D 261292 CDS YP_004696470.1 339484684 10935448 complement(3553121..3553492) 1 NC_015731.1 KEGG: nit:NAL212_2978 transcriptional regulator, TraR/DksA family; TraR/DksA family transcriptional regulator 3553492 10935448 Nit79A3_3342 Nitrosomonas sp. Is79A3 TraR/DksA family transcriptional regulator YP_004696470.1 3553121 R 261292 CDS YP_004696471.1 339484685 10935449 complement(3553596..3554129) 1 NC_015731.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: nit:NAL212_2977 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 3554129 10935449 Nit79A3_3343 Nitrosomonas sp. Is79A3 alkyl hydroperoxide reductase YP_004696471.1 3553596 R 261292 CDS YP_004696472.1 339484686 10935450 complement(3554145..3555377) 1 NC_015731.1 PFAM: Major facilitator superfamily MFS-1; KEGG: nmu:Nmul_A0026 major facilitator transporter; major facilitator superfamily protein 3555377 10935450 Nit79A3_3344 Nitrosomonas sp. Is79A3 major facilitator superfamily protein YP_004696472.1 3554145 R 261292 CDS YP_004696473.1 339484687 10935452 complement(3555688..3556395) 1 NC_015731.1 PFAM: Restriction endonuclease, type IV-like, Mrr; KEGG: vfm:VFMJ11_A0652 restriction endonuclease; restriction endonuclease 3556395 10935452 Nit79A3_3345 Nitrosomonas sp. Is79A3 restriction endonuclease YP_004696473.1 3555688 R 261292 CDS YP_004696474.1 339484688 10935454 complement(3556991..3558076) 1 NC_015731.1 TIGRFAM: Addiction module antidote protein, HigA; PFAM: Helix-turn-helix type 3; Protein of unknown function DUF955; KEGG: cyt:cce_1126 hypothetical protein; SMART: Helix-turn-helix type 3; XRE family transcriptional regulator 3558076 10935454 Nit79A3_3347 Nitrosomonas sp. Is79A3 XRE family transcriptional regulator YP_004696474.1 3556991 R 261292 CDS YP_004696475.1 339484689 10935455 complement(3558066..3558371) 1 NC_015731.1 PFAM: Plasmid maintenance system killer; KEGG: cki:Calkr_0087 hypothetical protein; plasmid maintenance system killer 3558371 10935455 Nit79A3_3348 Nitrosomonas sp. Is79A3 plasmid maintenance system killer YP_004696475.1 3558066 R 261292 CDS YP_004696476.1 339484690 10935457 complement(3559631..3560248) 1 NC_015731.1 KEGG: rsc:RCFBP_11248 hypothetical protein; hypothetical protein 3560248 10935457 Nit79A3_3350 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696476.1 3559631 R 261292 CDS YP_004696477.1 339484691 10935458 complement(3560320..3561903) 1 NC_015731.1 KEGG: nit:NAL212_0062 transposase IS66; manually curated; PFAM: Transposase, IS66; transposase IS66 3561903 10935458 Nit79A3_3351 Nitrosomonas sp. Is79A3 transposase IS66 YP_004696477.1 3560320 R 261292 CDS YP_004696478.1 339484692 10935459 complement(3561953..3562300) 1 NC_015731.1 KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein 3562300 10935459 Nit79A3_3352 Nitrosomonas sp. Is79A3 IS66 Orf2 family protein YP_004696478.1 3561953 R 261292 CDS YP_004696479.1 339484693 10935460 complement(3562291..3562581) 1 NC_015731.1 KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein 3562581 10935460 Nit79A3_3353 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696479.1 3562291 R 261292 CDS YP_004696480.1 339484694 10935461 complement(3562630..3564465) 1 NC_015731.1 PFAM: Protein of unknown function DUF262; Protein of unknown function DUF1524 RloF; KEGG: dol:Dole_2238 hypothetical protein; hypothetical protein 3564465 10935461 Nit79A3_3354 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696480.1 3562630 R 261292 CDS YP_004696481.1 339484695 10935463 complement(3567674..3568096) 1 NC_015731.1 TIGRFAM: Protein of unknown function DUF132; PFAM: PilT protein, N-terminal; KEGG: aca:ACP_3427 conserved hypothetical protein TIGR00305; SMART: Nucleotide binding protein, PINc; hypothetical protein 3568096 10935463 Nit79A3_3356 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696481.1 3567674 R 261292 CDS YP_004696482.1 339484696 10935464 complement(3568083..3568358) 1 NC_015731.1 TIGRFAM: Prevent-host-death protein; KEGG: aca:ACP_3428 prevent-host-death family protein; prevent-host-death family protein 3568358 10935464 Nit79A3_3357 Nitrosomonas sp. Is79A3 prevent-host-death family protein YP_004696482.1 3568083 R 261292 CDS YP_004696483.1 339484697 10935465 complement(3568408..3569799) 1 NC_015731.1 PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: mjl:Mjls_2226 restriction modification system DNA specificity subunit; restriction modification system DNA specificity domain-containing protein 3569799 10935465 Nit79A3_3358 Nitrosomonas sp. Is79A3 restriction modification system DNA specificity domain-containing protein YP_004696483.1 3568408 R 261292 CDS YP_004696484.1 339484698 10935466 complement(3569796..3570218) 1 NC_015731.1 KEGG: glo:Glov_2071 PilT protein domain protein; twitching motility protein PilT 3570218 10935466 Nit79A3_3359 Nitrosomonas sp. Is79A3 twitching motility protein PilT YP_004696484.1 3569796 R 261292 CDS YP_004696485.1 339484699 10935467 complement(3570208..3570489) 1 NC_015731.1 hypothetical protein 3570489 10935467 Nit79A3_3360 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696485.1 3570208 R 261292 CDS YP_004696486.1 339484700 10935469 3572690..3573022 1 NC_015731.1 KEGG: nit:NAL212_0067 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; histone family protein DNA-binding protein 3573022 10935469 Nit79A3_3362 Nitrosomonas sp. Is79A3 histone family protein DNA-binding protein YP_004696486.1 3572690 D 261292 CDS YP_004696487.1 339484701 10935471 complement(3573578..3573805) 1 NC_015731.1 hypothetical protein 3573805 10935471 Nit79A3_3364 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696487.1 3573578 R 261292 CDS YP_004696488.1 339484702 10935472 complement(3573802..3574521) 1 NC_015731.1 PFAM: Phage antirepressor protein; Phage regulatory protein, Rha-like; KEGG: epy:EpC_20720 pahge-related protein; phage antirepressor protein 3574521 10935472 Nit79A3_3365 Nitrosomonas sp. Is79A3 phage antirepressor protein YP_004696488.1 3573802 R 261292 CDS YP_004696489.1 339484703 10935473 complement(3574723..3575271) 1 NC_015731.1 KEGG: xcv:XCV2222 hypothetical protein; hypothetical protein 3575271 10935473 Nit79A3_3366 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696489.1 3574723 R 261292 CDS YP_004696490.1 339484704 10935474 complement(3575349..3575579) 1 NC_015731.1 KEGG: sbn:Sbal195_3111 hypothetical protein; hypothetical protein 3575579 10935474 Nit79A3_3367 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696490.1 3575349 R 261292 CDS YP_004696491.1 339484705 10935475 complement(3575724..3576425) 1 NC_015731.1 KEGG: nmu:Nmul_A2183 hypothetical protein; hypothetical protein 3576425 10935475 Nit79A3_3368 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696491.1 3575724 R 261292 CDS YP_004696492.1 339484706 10935476 complement(3576437..3577624) 1 NC_015731.1 PFAM: Integrase, catalytic core, phage; KEGG: rpf:Rpic12D_1016 integrase; integrase 3577624 10935476 Nit79A3_3369 Nitrosomonas sp. Is79A3 integrase YP_004696492.1 3576437 R 261292 CDS YP_004696493.1 339484707 10935477 3578260..3578826 1 NC_015731.1 KEGG: app:CAP2UW1_2168 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 3578826 10935477 Nit79A3_3370 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004696493.1 3578260 D 261292 CDS YP_004696494.1 339484708 10935478 complement(3579162..3579545) 1 NC_015731.1 KEGG: nit:NAL212_2339 hypothetical protein; hypothetical protein 3579545 10935478 Nit79A3_3371 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696494.1 3579162 R 261292 CDS YP_004696495.1 339484709 10935479 3579718..3582081 1 NC_015731.1 KEGG: nit:NAL212_0226 type I site-specific deoxyribonuclease; PFAM: Restriction endonuclease, type I, EcoEI, R subunit/Type III, Res subunit, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; EcoEI R domain-containing protein 3582081 10935479 Nit79A3_3372 Nitrosomonas sp. Is79A3 EcoEI R domain-containing protein YP_004696495.1 3579718 D 261292 CDS YP_004696496.1 339484710 10935480 3582120..3583589 1 NC_015731.1 PFAM: DNA methylase, adenine-specific; KEGG: nit:NAL212_0225 site-specific DNA-methyltransferase (adenine-specific); N-6 DNA methylase 3583589 10935480 Nit79A3_3373 Nitrosomonas sp. Is79A3 N-6 DNA methylase YP_004696496.1 3582120 D 261292 CDS YP_004696497.1 339484711 10935481 3583830..3585029 1 NC_015731.1 SMART: ATPase, AAA+ type, core; KEGG: nit:NAL212_0224 AAA ATPase; ATPase AAA 3585029 10935481 Nit79A3_3374 Nitrosomonas sp. Is79A3 ATPase AAA YP_004696497.1 3583830 D 261292 CDS YP_004696498.1 339484712 10935482 3585026..3586795 1 NC_015731.1 PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: ecl:EcolC_3719 restriction modification system DNA specificity subunit; restriction modification system DNA specificity domain-containing protein 3586795 10935482 Nit79A3_3375 Nitrosomonas sp. Is79A3 restriction modification system DNA specificity domain-containing protein YP_004696498.1 3585026 D 261292 CDS YP_004696499.1 339484713 10935483 3586942..3588423 1 NC_015731.1 KEGG: nit:NAL212_2273 hypothetical protein; HAMAP: UPF0061 protein ydiU; PFAM: Uncharacterised protein family UPF0061; hypothetical protein 3588423 10935483 Nit79A3_3376 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696499.1 3586942 D 261292 CDS YP_004696500.1 339484714 10935484 complement(3588525..3589907) 1 NC_015731.1 PFAM: NAD(P) transhydrogenase, beta subunit; KEGG: nit:NAL212_0651 NAD(P)(+) transhydrogenase (AB-specific); NAD(P) transhydrogenase subunit beta 3589907 10935484 Nit79A3_3377 Nitrosomonas sp. Is79A3 NAD(P) transhydrogenase subunit beta YP_004696500.1 3588525 R 261292 CDS YP_004696501.1 339484715 10935485 complement(3589908..3590216) 1 NC_015731.1 KEGG: nit:NAL212_0650 transmembrane NAD(P) transhydrogenase (alpha subunit part 2); transmembrane NAD(P) transhydrogenase (subunit alpha part 2) 3590216 10935485 Nit79A3_3378 Nitrosomonas sp. Is79A3 transmembrane NAD(P) transhydrogenase (subunit alpha part 2) YP_004696501.1 3589908 R 261292 CDS YP_004696502.1 339484716 10935486 complement(3590296..3591423) 1 NC_015731.1 PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; KEGG: nit:NAL212_0649 NAD(P)(+) transhydrogenase (AB-specific); alanine dehydrogenase 3591423 10935486 Nit79A3_3379 Nitrosomonas sp. Is79A3 alanine dehydrogenase YP_004696502.1 3590296 R 261292 CDS YP_004696503.1 339484717 10935487 complement(3591741..3592127) 1 NC_015731.1 KEGG: nit:NAL212_0648 Hpt domain-containing protein; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: Signal transduction histidine kinase, phosphotransfer (Hpt) region; Hpt domain-containing protein 3592127 10935487 Nit79A3_3380 Nitrosomonas sp. Is79A3 Hpt domain-containing protein YP_004696503.1 3591741 R 261292 CDS YP_004696504.1 339484718 10935488 complement(3592342..3595887) 1 NC_015731.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nit:NAL212_0647 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3595887 10935488 Nit79A3_3381 Nitrosomonas sp. Is79A3 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004696504.1 3592342 R 261292 CDS YP_004696505.1 339484719 10935489 complement(3596000..3597211) 1 NC_015731.1 KEGG: hch:HCH_00967 FOG EAL domain-containing protein; PFAM: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region; SMART: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region; response regulator receiver modulated diguanylate phosphodiesterase 3597211 10935489 Nit79A3_3382 Nitrosomonas sp. Is79A3 response regulator receiver modulated diguanylate phosphodiesterase YP_004696505.1 3596000 R 261292 CDS YP_004696506.1 339484720 10935490 complement(3597303..3597743) 1 NC_015731.1 KEGG: nit:NAL212_0646 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 3597743 10935490 Nit79A3_3383 Nitrosomonas sp. Is79A3 response regulator receiver protein YP_004696506.1 3597303 R 261292 CDS YP_004696507.1 339484721 10935491 complement(3597819..3599096) 1 NC_015731.1 TIGRFAM: Sulphate adenylyltransferase, large subunit; Small GTP-binding protein; HAMAP: Sulfate adenylyltransferase subunit 1; KEGG: nmu:Nmul_A1149 sulfate adenylyltransferase, large subunit; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Sulfate adenylyltransferase subunit 1 3599096 10935491 Nit79A3_3384 Nitrosomonas sp. Is79A3 Sulfate adenylyltransferase subunit 1 YP_004696507.1 3597819 R 261292 CDS YP_004696508.1 339484722 10935492 complement(3599228..3600133) 1 NC_015731.1 KEGG: nmu:Nmul_A1148 sulfate adenylyltransferase subunit 2; TIGRFAM: Sulphate adenylyltransferase, small subunit; PFAM: Phosphoadenosine phosphosulphate reductase; sulfate adenylyltransferase, small subunit 3600133 10935492 Nit79A3_3385 Nitrosomonas sp. Is79A3 sulfate adenylyltransferase, small subunit YP_004696508.1 3599228 R 261292 CDS YP_004696509.1 339484723 10935493 complement(3600219..3600917) 1 NC_015731.1 KEGG: nit:NAL212_0644 adenylylsulfate reductase, thioredoxin dependent; TIGRFAM: Adenylylsulphate reductase, thioredoxin dependent; Phosphoadenosine phosphosulphate reductase CysH-type; PFAM: Phosphoadenosine phosphosulphate reductase; adenylylsulfate reductase, thioredoxin dependent 3600917 10935493 Nit79A3_3386 Nitrosomonas sp. Is79A3 adenylylsulfate reductase, thioredoxin dependent YP_004696509.1 3600219 R 261292 CDS YP_004696510.1 339484724 10935494 complement(3600910..3601443) 1 NC_015731.1 PFAM: Uncharacterised conserved protein UCP030820; KEGG: nit:NAL212_0643 hypothetical protein; hypothetical protein 3601443 10935494 Nit79A3_3387 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696510.1 3600910 R 261292 CDS YP_004696511.1 339484725 10935495 complement(3601450..3603192) 1 NC_015731.1 PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; KEGG: nit:NAL212_0642 ferredoxin--nitrite reductase; nitrite and sulfite reductase 4Fe-4S region 3603192 10935495 Nit79A3_3388 Nitrosomonas sp. Is79A3 nitrite and sulfite reductase 4Fe-4S region YP_004696511.1 3601450 R 261292 CDS YP_004696512.1 339484726 10935496 complement(3603279..3603509) 1 NC_015731.1 KEGG: nit:NAL212_0641 hypothetical protein; hypothetical protein 3603509 10935496 Nit79A3_3389 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696512.1 3603279 R 261292 CDS YP_004696513.1 339484727 10935497 3604073..3605071 1 NC_015731.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nit:NAL212_0640 transcriptional regulator, LysR family; LysR family transcriptional regulator 3605071 10935497 Nit79A3_3390 Nitrosomonas sp. Is79A3 LysR family transcriptional regulator YP_004696513.1 3604073 D 261292 CDS YP_004696514.1 339484728 10935498 3605068..3605619 1 NC_015731.1 KEGG: nit:NAL212_0639 hypothetical protein; hypothetical protein 3605619 10935498 Nit79A3_3391 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696514.1 3605068 D 261292 CDS YP_004696515.1 339484729 10935499 3605690..3606118 1 NC_015731.1 KEGG: nit:NAL212_0638 hypothetical protein; hypothetical protein 3606118 10935499 Nit79A3_3392 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696515.1 3605690 D 261292 CDS YP_004696516.1 339484730 10935500 3606261..3607133 1 NC_015731.1 PFAM: Mitochondrial inner membrane translocase complex, subunit Tim44-related; KEGG: nit:NAL212_0637 import inner membrane translocase subunit Tim44; import inner membrane translocase subunit Tim44 3607133 10935500 Nit79A3_3393 Nitrosomonas sp. Is79A3 import inner membrane translocase subunit Tim44 YP_004696516.1 3606261 D 261292 CDS YP_004696517.1 339484731 10935501 3607424..3607918 1 NC_015731.1 PFAM: Protein of unknown function DUF2165, transmembrane; KEGG: nit:NAL212_0636 hypothetical protein; hypothetical protein 3607918 10935501 Nit79A3_3394 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696517.1 3607424 D 261292 CDS YP_004696518.1 339484732 10935502 complement(3608060..3608467) 1 NC_015731.1 PFAM: Protein of unknown function DUF336; KEGG: nit:NAL212_0634 hypothetical protein; hypothetical protein 3608467 10935502 Nit79A3_3395 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696518.1 3608060 R 261292 CDS YP_004696519.1 339484733 10935503 complement(3608604..3609557) 1 NC_015731.1 manually curated; KEGG: nit:NAL212_0633 serine O-acetyltransferase; serine O-acetyltransferase 3609557 10935503 Nit79A3_3396 Nitrosomonas sp. Is79A3 serine O-acetyltransferase YP_004696519.1 3608604 R 261292 CDS YP_004696520.1 339484734 10935504 complement(3609554..3610534) 1 NC_015731.1 KEGG: nit:NAL212_0632 cysteine synthase; TIGRFAM: Cysteine synthase A; Cysteine synthase K/M; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; cysteine synthase A 3610534 10935504 Nit79A3_3397 Nitrosomonas sp. Is79A3 cysteine synthase A YP_004696520.1 3609554 R 261292 CDS YP_004696521.1 339484735 10935505 3611114..3611902 1 NC_015731.1 KEGG: cce:Ccel_1543 cellulosome anchoring protein cohesin region; TIGRFAM: PEP-CTERM anchor; PFAM: Thrombospondin, C-terminal; PEP-CTERM bacterial; PEP motif anchor domain-containing protein 3611902 10935505 Nit79A3_3398 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004696521.1 3611114 D 261292 CDS YP_004696522.1 339484736 10935506 3612267..3612926 1 NC_015731.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal; KEGG: bge:BC1002_4939 peroxidase; alkyl hydroperoxide reductase 3612926 10935506 Nit79A3_3399 Nitrosomonas sp. Is79A3 alkyl hydroperoxide reductase YP_004696522.1 3612267 D 261292 CDS YP_004696523.1 339484737 10935507 complement(3612981..3613367) 1 NC_015731.1 hypothetical protein 3613367 10935507 Nit79A3_3400 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696523.1 3612981 R 261292 CDS YP_004696524.1 339484738 10935508 3613784..3614548 1 NC_015731.1 PFAM: Protein of unknown function DUF980; KEGG: nmu:Nmul_A1873 hypothetical protein; hypothetical protein 3614548 10935508 Nit79A3_3401 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696524.1 3613784 D 261292 CDS YP_004696525.1 339484739 10935509 complement(3614563..3615225) 1 NC_015731.1 KEGG: bcd:BARCL_0364 hypothetical protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 3615225 10935509 Nit79A3_3402 Nitrosomonas sp. Is79A3 HAD-superfamily hydrolase YP_004696525.1 3614563 R 261292 CDS YP_004696526.1 339484740 10935510 complement(3615268..3616542) 1 NC_015731.1 hypothetical protein 3616542 10935510 Nit79A3_3403 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696526.1 3615268 R 261292 CDS YP_004696527.1 339484741 10935511 complement(3616820..3617344) 1 NC_015731.1 PFAM: Phosphoglycerate mutase; KEGG: rca:Rcas_2324 phosphoglycerate mutase; Phosphoglycerate mutase 3617344 10935511 Nit79A3_3404 Nitrosomonas sp. Is79A3 Phosphoglycerate mutase YP_004696527.1 3616820 R 261292 CDS YP_004696528.1 339484742 10935512 3617554..3617802 1 NC_015731.1 TIGRFAM: Prevent-host-death protein; KEGG: ppd:Ppro_2533 prevent-host-death family protein; prevent-host-death family protein 3617802 10935512 Nit79A3_3405 Nitrosomonas sp. Is79A3 prevent-host-death family protein YP_004696528.1 3617554 D 261292 CDS YP_004696529.1 339484743 10935513 3617799..3618083 1 NC_015731.1 KEGG: geb:GM18_1754 hypothetical protein; hypothetical protein 3618083 10935513 Nit79A3_3406 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696529.1 3617799 D 261292 CDS YP_004696530.1 339484744 10935514 3618064..3618342 1 NC_015731.1 hypothetical protein 3618342 10935514 Nit79A3_3407 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696530.1 3618064 D 261292 CDS YP_004696531.1 339484745 10935515 complement(3618277..3618540) 1 NC_015731.1 TIGRFAM: Prevent-host-death protein; KEGG: mag:amb1707 antitoxin of toxin-antitoxin stability system; prevent-host-death family protein 3618540 10935515 Nit79A3_3408 Nitrosomonas sp. Is79A3 prevent-host-death family protein YP_004696531.1 3618277 R 261292 CDS YP_004696532.1 339484746 10935516 3618708..3618983 1 NC_015731.1 KEGG: lch:Lcho_4295 hypothetical protein; hypothetical protein 3618983 10935516 Nit79A3_3409 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696532.1 3618708 D 261292 CDS YP_004696533.1 339484747 10935517 3619000..3619155 1 NC_015731.1 hypothetical protein 3619155 10935517 Nit79A3_3410 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696533.1 3619000 D 261292 CDS YP_004696534.1 339484748 10935518 complement(3619221..3619829) 1 NC_015731.1 hypothetical protein 3619829 10935518 Nit79A3_3411 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696534.1 3619221 R 261292 CDS YP_004696535.1 339484749 10935519 complement(3619973..3621199) 1 NC_015731.1 PFAM: NnrS; KEGG: nit:NAL212_0293 NnrS family protein; NnrS family protein 3621199 10935519 Nit79A3_3412 Nitrosomonas sp. Is79A3 NnrS family protein YP_004696535.1 3619973 R 261292 CDS YP_004696536.1 339484750 10935520 3621472..3622329 1 NC_015731.1 KEGG: nit:NAL212_0291 PHP domain-containing protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; PHP domain-containing protein 3622329 10935520 Nit79A3_3413 Nitrosomonas sp. Is79A3 PHP domain-containing protein YP_004696536.1 3621472 D 261292 CDS YP_004696537.1 339484751 10935521 3622381..3623013 1 NC_015731.1 KEGG: nit:NAL212_0290 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; Sua5/YciO/YrdC/YwlC family protein 3623013 10935521 Nit79A3_3414 Nitrosomonas sp. Is79A3 Sua5/YciO/YrdC/YwlC family protein YP_004696537.1 3622381 D 261292 CDS YP_004696538.1 339484752 10935522 3623006..3623671 1 NC_015731.1 PFAM: Peptidase M50; KEGG: nit:NAL212_0289 peptidase M50; peptidase M50 3623671 10935522 Nit79A3_3415 Nitrosomonas sp. Is79A3 peptidase M50 YP_004696538.1 3623006 D 261292 CDS YP_004696539.1 339484753 10935523 3623698..3624900 1 NC_015731.1 KEGG: nit:NAL212_0288 tryptophanyl-tRNA synthetase; TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; PFAM: Aminoacyl-tRNA synthetase, class Ib; tryptophanyl-tRNA synthetase 3624900 10935523 Nit79A3_3416 Nitrosomonas sp. Is79A3 tryptophanyl-tRNA synthetase YP_004696539.1 3623698 D 261292 CDS YP_004696540.1 339484754 10935524 3624959..3625771 1 NC_015731.1 KEGG: nit:NAL212_0287 chromosome segregation and condensation protein ScpA; HAMAP: Segregation and condensation protein A; PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; Segregation and condensation protein A 3625771 10935524 Nit79A3_3417 Nitrosomonas sp. Is79A3 Segregation and condensation protein A YP_004696540.1 3624959 D 261292 CDS YP_004696541.1 339484755 10935525 3625737..3626366 1 NC_015731.1 KEGG: nit:NAL212_0286 chromosome segregation and condensation protein, ScpB; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote; chromosome segregation and condensation protein ScpB 3626366 10935525 Nit79A3_3418 Nitrosomonas sp. Is79A3 chromosome segregation and condensation protein ScpB YP_004696541.1 3625737 D 261292 CDS YP_004696542.1 339484756 10935526 complement(3626360..3627181) 1 NC_015731.1 PFAM: Inositol monophosphatase; KEGG: nit:NAL212_0282 inositol-phosphate phosphatase; inositol monophosphatase 3627181 10935526 Nit79A3_3419 Nitrosomonas sp. Is79A3 inositol monophosphatase YP_004696542.1 3626360 R 261292 CDS YP_004696543.1 339484757 10935527 complement(3627404..3627958) 1 NC_015731.1 KEGG: nit:NAL212_1338 PEP motif anchor domain-containing protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif anchor domain-containing protein 3627958 10935527 Nit79A3_3420 Nitrosomonas sp. Is79A3 PEP motif anchor domain-containing protein YP_004696543.1 3627404 R 261292 CDS YP_004696544.1 339484758 10935528 3628694..3629374 1 NC_015731.1 KEGG: nit:NAL212_0281 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; LuxR family transcriptional regulator 3629374 10935528 Nit79A3_3421 Nitrosomonas sp. Is79A3 LuxR family transcriptional regulator YP_004696544.1 3628694 D 261292 CDS YP_004696545.1 339484759 10935529 3629614..3630339 1 NC_015731.1 KEGG: nit:NAL212_0281 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; LuxR family transcriptional regulator 3630339 10935529 Nit79A3_3422 Nitrosomonas sp. Is79A3 LuxR family transcriptional regulator YP_004696545.1 3629614 D 261292 CDS YP_004696546.1 339484760 10935530 3630575..3631597 1 NC_015731.1 PFAM: Multicopper oxidase, type 3; KEGG: nit:NAL212_0280 multicopper oxidase type 3; multicopper oxidase type 3 3631597 10935530 Nit79A3_3423 Nitrosomonas sp. Is79A3 multicopper oxidase type 3 YP_004696546.1 3630575 D 261292 CDS YP_004696547.1 339484761 10935531 3631587..3634388 1 NC_015731.1 PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; KEGG: nit:NAL212_0279 multicopper oxidase type 3; multicopper oxidase type 3 3634388 10935531 Nit79A3_3424 Nitrosomonas sp. Is79A3 multicopper oxidase type 3 YP_004696547.1 3631587 D 261292 CDS YP_004696548.1 339484762 10935532 3634650..3635765 1 NC_015731.1 PFAM: Transposase, IS4-like; KEGG: xbo:XBJ1_1885 transposase; transposase IS4 family protein 3635765 10935532 Nit79A3_3425 Nitrosomonas sp. Is79A3 transposase IS4 family protein YP_004696548.1 3634650 D 261292 CDS YP_004696549.1 339484763 10935534 complement(3637471..3638388) 1 NC_015731.1 KEGG: nit:NAL212_2959 hypothetical protein; hypothetical protein 3638388 10935534 Nit79A3_3427 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696549.1 3637471 R 261292 CDS YP_004696550.1 339484764 10935535 3638533..3639231 1 NC_015731.1 TIGRFAM: Leucyl/phenylalanyl-tRNA-protein transferase; HAMAP: Leucyl/phenylalanyl-tRNA-protein transferase; KEGG: nit:NAL212_0205 leucyl/phenylalanyl-tRNA/protein transferase; PFAM: Leucyl/phenylalanyl-tRNA-protein transferase; Leucyl/phenylalanyl-tRNA--protein transferase 3639231 10935535 Nit79A3_3428 Nitrosomonas sp. Is79A3 Leucyl/phenylalanyl-tRNA--protein transferase YP_004696550.1 3638533 D 261292 CDS YP_004696551.1 339484765 10935536 3639244..3639951 1 NC_015731.1 KEGG: nit:NAL212_0204 arginyl-tRNA--protein transferase; HAMAP: Arginine-tRNA-protein transferase, predicted, prokaryotic; PFAM: Arginine-tRNA-protein transferase, C-terminal; Arginine-tRNA-protein transferase, N-terminal; arginyl-tRNA-protein transferase 3639951 10935536 Nit79A3_3429 Nitrosomonas sp. Is79A3 arginyl-tRNA-protein transferase YP_004696551.1 3639244 D 261292 CDS YP_004696552.1 339484766 10935537 3639992..3641032 1 NC_015731.1 TIGRFAM: Dihydroorotate dehydrogenase, class 2; HAMAP: Dihydroorotate dehydrogenase; KEGG: nit:NAL212_0203 dihydroorotate dehydrogenase; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; Dihydroorotate dehydrogenase 3641032 10935537 Nit79A3_3430 Nitrosomonas sp. Is79A3 Dihydroorotate dehydrogenase YP_004696552.1 3639992 D 261292 CDS YP_004696553.1 339484767 10935538 3641035..3641718 1 NC_015731.1 KEGG: nit:NAL212_0202 electron transport complex, RnfABCDGE type, B subunit; TIGRFAM: Electron transport complex, RnfB; PFAM: Fe-S cluster; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; RnfABCDGE type electron transport complex subunit B 3641718 10935538 Nit79A3_3431 Nitrosomonas sp. Is79A3 RnfABCDGE type electron transport complex subunit B YP_004696553.1 3641035 D 261292 CDS YP_004696554.1 339484768 10935539 3641715..3642347 1 NC_015731.1 TIGRFAM: Endonuclease III/Nth; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; KEGG: nit:NAL212_0201 endonuclease III; SMART: HhH-GPD domain; Helix-hairpin-helix DNA-binding motif, class 1; Endonuclease III-like, iron-sulphur cluster loop motif; endonuclease III 3642347 10935539 Nit79A3_3432 Nitrosomonas sp. Is79A3 endonuclease III YP_004696554.1 3641715 D 261292 CDS YP_004696555.1 339484769 10935540 3642361..3642798 1 NC_015731.1 PFAM: Protein of unknown function DUF1841; KEGG: nit:NAL212_0200 hypothetical protein; hypothetical protein 3642798 10935540 Nit79A3_3433 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696555.1 3642361 D 261292 CDS YP_004696556.1 339484770 10935541 complement(3642873..3643202) 1 NC_015731.1 PFAM: Cytochrome c, class I; KEGG: nit:NAL212_0199 cytochrome c class I; cytochrome c class I 3643202 10935541 Nit79A3_3434 Nitrosomonas sp. Is79A3 cytochrome c class I YP_004696556.1 3642873 R 261292 CDS YP_004696557.1 339484771 10935542 complement(3643230..3643556) 1 NC_015731.1 KEGG: nit:NAL212_0198 cytochrome c class I; cytochrome c class I 3643556 10935542 Nit79A3_3435 Nitrosomonas sp. Is79A3 cytochrome c class I YP_004696557.1 3643230 R 261292 CDS YP_004696558.1 339484772 10935543 complement(3643664..3645589) 1 NC_015731.1 KEGG: nit:NAL212_0197 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 3645589 10935543 Nit79A3_3436 Nitrosomonas sp. Is79A3 ABC transporter YP_004696558.1 3643664 R 261292 CDS YP_004696559.1 339484773 10935544 complement(3645865..3646290) 1 NC_015731.1 PFAM: Heat shock protein Hsp20; KEGG: nit:NAL212_0196 heat shock protein HSP20; heat shock protein Hsp20 3646290 10935544 Nit79A3_3437 Nitrosomonas sp. Is79A3 heat shock protein Hsp20 YP_004696559.1 3645865 R 261292 CDS YP_004696560.1 339484774 10935545 complement(3646489..3647136) 1 NC_015731.1 KEGG: nit:NAL212_0195 hypothetical protein; hypothetical protein 3647136 10935545 Nit79A3_3438 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696560.1 3646489 R 261292 CDS YP_004696561.1 339484775 10935546 3647217..3647363 1 NC_015731.1 hypothetical protein 3647363 10935546 Nit79A3_3439 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696561.1 3647217 D 261292 CDS YP_004696562.1 339484776 10935547 complement(3647378..3647611) 1 NC_015731.1 KEGG: nwa:Nwat_2429 hypothetical protein; hypothetical protein 3647611 10935547 Nit79A3_3440 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696562.1 3647378 R 261292 CDS YP_004696563.1 339484777 10935548 complement(3647616..3648029) 1 NC_015731.1 KEGG: yps:YPTB1833 hypothetical protein; hypothetical protein 3648029 10935548 Nit79A3_3441 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696563.1 3647616 R 261292 CDS YP_004696564.1 339484778 10935549 complement(3648194..3648895) 1 NC_015731.1 PFAM: Protein of unknown function DUF45; KEGG: nit:NAL212_3099 hypothetical protein; hypothetical protein 3648895 10935549 Nit79A3_3442 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696564.1 3648194 R 261292 CDS YP_004696565.1 339484779 10935550 complement(3648898..3649638) 1 NC_015731.1 KEGG: nit:NAL212_3100 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 3649638 10935550 Nit79A3_3443 Nitrosomonas sp. Is79A3 phospholipid/glycerol acyltransferase YP_004696565.1 3648898 R 261292 CDS YP_004696566.1 339484780 10935551 complement(3649635..3650174) 1 NC_015731.1 KEGG: nit:NAL212_3101 histidinol-phosphate phosphatase; TIGRFAM: Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; PFAM: Haloacid dehalogenase-like hydrolase; histidinol-phosphate phosphatase 3650174 10935551 Nit79A3_3444 Nitrosomonas sp. Is79A3 histidinol-phosphate phosphatase YP_004696566.1 3649635 R 261292 CDS YP_004696567.1 339484781 10935552 complement(3650176..3652365) 1 NC_015731.1 TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit; HAMAP: Glycyl-tRNA synthetase beta subunit; KEGG: nit:NAL212_3102 glycyl-tRNA synthetase, beta subunit; Glycyl-tRNA synthetase subunit beta 3652365 10935552 Nit79A3_3445 Nitrosomonas sp. Is79A3 Glycyl-tRNA synthetase subunit beta YP_004696567.1 3650176 R 261292 CDS YP_004696568.1 339484782 10935553 complement(3652362..3653285) 1 NC_015731.1 TIGRFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Glycyl-tRNA synthetase, class IIc, alpha subunit; KEGG: nit:NAL212_3103 glycyl-tRNA synthetase, alpha subunit; PFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; Glycyl-tRNA synthetase subunit alpha 3653285 10935553 Nit79A3_3446 Nitrosomonas sp. Is79A3 Glycyl-tRNA synthetase subunit alpha YP_004696568.1 3652362 R 261292 CDS YP_004696569.1 339484783 10935554 complement(3653332..3654843) 1 NC_015731.1 TIGRFAM: Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; KEGG: nit:NAL212_3104 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Apolipoprotein N-acyltransferase 3654843 10935554 Nit79A3_3447 Nitrosomonas sp. Is79A3 Apolipoprotein N-acyltransferase YP_004696569.1 3653332 R 261292 CDS YP_004696570.1 339484784 10935555 3655227..3656963 1 NC_015731.1 PFAM: Tetratricopeptide TPR-1; KEGG: nit:NAL212_3105 hypothetical protein; hypothetical protein 3656963 10935555 Nit79A3_3448 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696570.1 3655227 D 261292 CDS YP_004696571.1 339484785 10935556 3657072..3657821 1 NC_015731.1 TIGRFAM: Septum formation inhibitor MinC; HAMAP: Septum formation inhibitor MinC; KEGG: nit:NAL212_3106 septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC, C-terminal; Septum formation inhibitor MinC, N-terminal; septum site-determining protein minC 3657821 10935556 Nit79A3_3449 Nitrosomonas sp. Is79A3 septum site-determining protein minC YP_004696571.1 3657072 D 261292 CDS YP_004696572.1 339484786 10935557 3657846..3658658 1 NC_015731.1 KEGG: nit:NAL212_3107 septum site-determining protein MinD; TIGRFAM: Septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; septum site-determining protein MinD 3658658 10935557 Nit79A3_3450 Nitrosomonas sp. Is79A3 septum site-determining protein MinD YP_004696572.1 3657846 D 261292 CDS YP_004696573.1 339484787 10935558 3658655..3658933 1 NC_015731.1 TIGRFAM: Septum formation topological specificity factor MinE; HAMAP: Septum formation topological specificity factor MinE; KEGG: nit:NAL212_3108 cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; Cell division topological specificity factor 3658933 10935558 Nit79A3_3451 Nitrosomonas sp. Is79A3 Cell division topological specificity factor YP_004696573.1 3658655 D 261292 CDS YP_004696574.1 339484788 10935559 3658956..3659660 1 NC_015731.1 TIGRFAM: Outer membrane lipoprotein LolB; HAMAP: Outer-membrane lipoprotein lolB; KEGG: nit:NAL212_3109 outer-membrane lipoprotein LolB; PFAM: Outer membrane lipoprotein LolB; Outer-membrane lipoprotein lolB 3659660 10935559 Nit79A3_3452 Nitrosomonas sp. Is79A3 Outer-membrane lipoprotein lolB YP_004696574.1 3658956 D 261292 CDS YP_004696575.1 339484789 10935560 3659707..3660546 1 NC_015731.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: nit:NAL212_3110 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 3660546 10935560 Nit79A3_3453 Nitrosomonas sp. Is79A3 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_004696575.1 3659707 D 261292 CDS YP_004696576.1 339484790 10935562 3660741..3661691 1 NC_015731.1 KEGG: nit:NAL212_3111 ribose-phosphate pyrophosphokinase; TIGRFAM: Phosphoribosyl pyrophosphokinase; PFAM: Phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 3661691 10935562 Nit79A3_3454 Nitrosomonas sp. Is79A3 ribose-phosphate pyrophosphokinase YP_004696576.1 3660741 D 261292 CDS YP_004696577.1 339484791 10935563 3661757..3662380 1 NC_015731.1 TIGRFAM: Ribosomal protein L25; HAMAP: 50S ribosomal protein L25; Ribosomal protein L25; KEGG: nit:NAL212_3112 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25, N-terminal; 50S ribosomal protein L25 3662380 10935563 Nit79A3_3455 Nitrosomonas sp. Is79A3 50S ribosomal protein L25 YP_004696577.1 3661757 D 261292 CDS YP_004696578.1 339484792 10935564 3662502..3663071 1 NC_015731.1 TIGRFAM: Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; KEGG: nit:NAL212_3113 peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 3663071 10935564 Nit79A3_3456 Nitrosomonas sp. Is79A3 peptidyl-tRNA hydrolase YP_004696578.1 3662502 D 261292 CDS YP_004696579.1 339484793 10935565 3663131..3664222 1 NC_015731.1 KEGG: nit:NAL212_3114 GTP-binding protein YchF; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Protein of unknown function DUF933; GTP-binding protein, HSR1-related; GTP-binding protein YchF 3664222 10935565 Nit79A3_3457 Nitrosomonas sp. Is79A3 GTP-binding protein YchF YP_004696579.1 3663131 D 261292 CDS YP_004696580.1 339484794 10935566 3664325..3665440 1 NC_015731.1 PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: nit:NAL212_3115 filamentation induced by cAMP protein Fic; Fic family protein 3665440 10935566 Nit79A3_3458 Nitrosomonas sp. Is79A3 Fic family protein YP_004696580.1 3664325 D 261292 CDS YP_004696581.1 339484795 10935567 3665517..3666164 1 NC_015731.1 KEGG: ajs:Ajs_0195 type III restriction system methylase; type III restriction system methylase 3666164 10935567 Nit79A3_3459 Nitrosomonas sp. Is79A3 type III restriction system methylase YP_004696581.1 3665517 D 261292 CDS YP_004696582.1 339484796 10935568 3666161..3667810 1 NC_015731.1 KEGG: ajs:Ajs_0197 Eco57I restriction endonuclease; Eco57I restriction endonuclease 3667810 10935568 Nit79A3_3460 Nitrosomonas sp. Is79A3 Eco57I restriction endonuclease YP_004696582.1 3666161 D 261292 CDS YP_004696583.1 339484797 10935569 3667803..3670340 1 NC_015731.1 KEGG: cpb:Cphamn1_0745 hypothetical protein; hypothetical protein 3670340 10935569 Nit79A3_3461 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696583.1 3667803 D 261292 CDS YP_004696584.1 339484798 10935571 complement(3671589..3671888) 1 NC_015731.1 KEGG: nla:NLA_6641 hypothetical protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal; excinuclease ABC subunit C 3671888 10935571 Nit79A3_3463 Nitrosomonas sp. Is79A3 excinuclease ABC subunit C YP_004696584.1 3671589 R 261292 CDS YP_004696585.1 339484799 10935572 complement(3672026..3674929) 1 NC_015731.1 KEGG: nit:NAL212_3117 RNA polymerase recycling-like protein; PFAM: SNF2-related; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SNF2-like protein 3674929 10935572 Nit79A3_3464 Nitrosomonas sp. Is79A3 SNF2-like protein YP_004696585.1 3672026 R 261292 CDS YP_004696586.1 339484800 10935573 complement(3675187..3675939) 1 NC_015731.1 PFAM: Protein of unknown function DUF2490; KEGG: nit:NAL212_3118 hypothetical protein; hypothetical protein 3675939 10935573 Nit79A3_3465 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696586.1 3675187 R 261292 CDS YP_004696587.1 339484801 10935574 3676628..3676936 1 NC_015731.1 PFAM: Cytochrome c, class I; KEGG: nit:NAL212_3121 cytochrome c, class I; cytochrome c class I 3676936 10935574 Nit79A3_3466 Nitrosomonas sp. Is79A3 cytochrome c class I YP_004696587.1 3676628 D 261292 CDS YP_004696588.1 339484802 10935575 complement(3676982..3678391) 1 NC_015731.1 TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN; PFAM: HemN, C-terminal; Radical SAM; KEGG: nit:NAL212_3122 coproporphyrinogen dehydrogenase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 3678391 10935575 Nit79A3_3467 Nitrosomonas sp. Is79A3 oxygen-independent coproporphyrinogen III oxidase YP_004696588.1 3676982 R 261292 CDS YP_004696589.1 339484803 10935576 3678632..3679384 1 NC_015731.1 KEGG: nit:NAL212_3123 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 3679384 10935576 Nit79A3_3468 Nitrosomonas sp. Is79A3 Crp/Fnr family transcriptional regulator YP_004696589.1 3678632 D 261292 CDS YP_004696590.1 339484804 10935577 3679675..3680394 1 NC_015731.1 KEGG: nit:NAL212_3124 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2; 30S ribosomal protein S2 3680394 10935577 Nit79A3_3469 Nitrosomonas sp. Is79A3 30S ribosomal protein S2 YP_004696590.1 3679675 D 261292 CDS YP_004696591.1 339484805 10935578 3680566..3681450 1 NC_015731.1 TIGRFAM: Translation elongation factor EFTs/EF1B; HAMAP: Elongation factor Ts; KEGG: nit:NAL212_3125 translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; Elongation factor Ts 3681450 10935578 Nit79A3_3470 Nitrosomonas sp. Is79A3 Elongation factor Ts YP_004696591.1 3680566 D 261292 CDS YP_004696592.1 339484806 10935579 3681481..3682197 1 NC_015731.1 KEGG: nit:NAL212_3126 uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; PFAM: Aspartate/glutamate/uridylate kinase; uridylate kinase 3682197 10935579 Nit79A3_3471 Nitrosomonas sp. Is79A3 uridylate kinase YP_004696592.1 3681481 D 261292 CDS YP_004696593.1 339484807 10935580 3682247..3682804 1 NC_015731.1 TIGRFAM: Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; KEGG: nit:NAL212_3127 ribosome recycling factor; PFAM: Ribosome recycling factor; Ribosome-recycling factor 3682804 10935580 Nit79A3_3472 Nitrosomonas sp. Is79A3 Ribosome-recycling factor YP_004696593.1 3682247 D 261292 CDS YP_004696594.1 339484808 10935581 3682806..3683573 1 NC_015731.1 TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Undecaprenyl pyrophosphate synthase; KEGG: nit:NAL212_3128 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; UDP pyrophosphate synthase 3683573 10935581 Nit79A3_3473 Nitrosomonas sp. Is79A3 UDP pyrophosphate synthase YP_004696594.1 3682806 D 261292 CDS YP_004696595.1 339484809 10935582 3683588..3684409 1 NC_015731.1 PFAM: Phosphatidate cytidylyltransferase; KEGG: nit:NAL212_3129 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 3684409 10935582 Nit79A3_3474 Nitrosomonas sp. Is79A3 phosphatidate cytidylyltransferase YP_004696595.1 3683588 D 261292 CDS YP_004696596.1 339484810 10935583 3684409..3685596 1 NC_015731.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: nit:NAL212_3130 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3685596 10935583 Nit79A3_3475 Nitrosomonas sp. Is79A3 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_004696596.1 3684409 D 261292 CDS YP_004696597.1 339484811 10935584 3685708..3687075 1 NC_015731.1 KEGG: nit:NAL212_3131 membrane-associated zinc metalloprotease; TIGRFAM: Peptidase M50, membrane-associated zinc metallopeptidase; PFAM: Peptidase M50; PDZ/DHR/GLGF; zinc metalloprotease 3687075 10935584 Nit79A3_3476 Nitrosomonas sp. Is79A3 zinc metalloprotease YP_004696597.1 3685708 D 261292 CDS YP_004696598.1 339484812 10935585 3687079..3689352 1 NC_015731.1 KEGG: nit:NAL212_3132 outer membrane protein assembly complex, YaeT protein; TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; outer membrane protein assembly complex, YaeT protein 3689352 10935585 Nit79A3_3477 Nitrosomonas sp. Is79A3 outer membrane protein assembly complex, YaeT protein YP_004696598.1 3687079 D 261292 CDS YP_004696599.1 339484813 10935586 3689383..3689910 1 NC_015731.1 KEGG: nit:NAL212_3133 outer membrane chaperone Skp (OmpH); manually curated; PFAM: Outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 3689910 10935586 Nit79A3_3478 Nitrosomonas sp. Is79A3 outer membrane chaperone Skp YP_004696599.1 3689383 D 261292 CDS YP_004696600.1 339484814 10935587 3689976..3690419 1 NC_015731.1 TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; HAMAP: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; KEGG: nit:NAL212_3134 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; (3R)-hydroxymyristoyl-ACP dehydratase 3690419 10935587 Nit79A3_3479 Nitrosomonas sp. Is79A3 (3R)-hydroxymyristoyl-ACP dehydratase YP_004696600.1 3689976 D 261292 CDS YP_004696601.1 339484815 10935588 3690621..3691229 1 NC_015731.1 PFAM: Ribonuclease HII/HIII; KEGG: nit:NAL212_3135 ribonuclease H; ribonuclease HII/HIII 3691229 10935588 Nit79A3_3480 Nitrosomonas sp. Is79A3 ribonuclease HII/HIII YP_004696601.1 3690621 D 261292 CDS YP_004696602.1 339484816 10935589 3691389..3691868 1 NC_015731.1 KEGG: nit:NAL212_3136 peptidylprolyl isomerase FKBP-type; FKBP-type peptidylprolyl isomerase 3691868 10935589 Nit79A3_3481 Nitrosomonas sp. Is79A3 FKBP-type peptidylprolyl isomerase YP_004696602.1 3691389 D 261292 CDS YP_004696603.1 339484817 10935590 complement(3691899..3694499) 1 NC_015731.1 SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; TIGRFAM: DNA mismatch repair protein MutS, type 1; KEGG: nit:NAL212_3137 DNA mismatch repair protein MutS; HAMAP: DNA mismatch repair protein MutS, type 1; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp; DNA mismatch repair protein mutS 3694499 10935590 Nit79A3_3482 Nitrosomonas sp. Is79A3 DNA mismatch repair protein mutS YP_004696603.1 3691899 R 261292 CDS YP_004696604.1 339484818 10935591 complement(3694955..3696061) 1 NC_015731.1 PFAM: Glutaredoxin; KEGG: tmz:Tmz1t_0130 glutaredoxin; glutaredoxin 3696061 10935591 Nit79A3_3483 Nitrosomonas sp. Is79A3 glutaredoxin YP_004696604.1 3694955 R 261292 CDS YP_004696605.1 339484819 10935593 complement(3696558..3697067) 1 NC_015731.1 KEGG: neu:NE1179 transmembrane protein; transmembrane protein 3697067 10935593 Nit79A3_3485 Nitrosomonas sp. Is79A3 transmembrane protein YP_004696605.1 3696558 R 261292 CDS YP_004696606.1 339484820 10935594 complement(3697210..3698262) 1 NC_015731.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: net:Neut_1521 cytochrome-c peroxidase; Di-heme cytochrome c peroxidase 3698262 10935594 Nit79A3_3486 Nitrosomonas sp. Is79A3 Di-heme cytochrome c peroxidase YP_004696606.1 3697210 R 261292 CDS YP_004696607.1 339484821 10935595 complement(3698445..3699284) 1 NC_015731.1 hypothetical protein 3699284 10935595 Nit79A3_3487 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696607.1 3698445 R 261292 CDS YP_004696608.1 339484822 10935596 complement(3699494..3701203) 1 NC_015731.1 KEGG: cyp:PCC8801_3794 hypothetical protein; hypothetical protein 3701203 10935596 Nit79A3_3488 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696608.1 3699494 R 261292 CDS YP_004696609.1 339484823 10935597 complement(3701700..3703082) 1 NC_015731.1 KEGG: net:Neut_2275 hypothetical protein; hypothetical protein 3703082 10935597 Nit79A3_3489 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696609.1 3701700 R 261292 CDS YP_004696610.1 339484824 10935598 3703475..3704551 1 NC_015731.1 PFAM: Peptidase M4, thermolysin C-terminal; Peptidase M4, thermolysin; KEGG: pfs:PFLU4216 metalloprotease; peptidase M4 thermolysin 3704551 10935598 Nit79A3_3490 Nitrosomonas sp. Is79A3 peptidase M4 thermolysin YP_004696610.1 3703475 D 261292 CDS YP_004696611.1 339484825 10935599 3704576..3704914 1 NC_015731.1 KEGG: mxa:MXAN_4012 hypothetical protein; hypothetical protein 3704914 10935599 Nit79A3_3491 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696611.1 3704576 D 261292 CDS YP_004696612.1 339484826 10935600 complement(3705061..3705513) 1 NC_015731.1 SMART: Rhodanese-like; KEGG: nit:NAL212_3186 rhodanese-like protein; Rhodanese-like protein 3705513 10935600 Nit79A3_3492 Nitrosomonas sp. Is79A3 Rhodanese-like protein YP_004696612.1 3705061 R 261292 CDS YP_004696613.1 339484827 10935601 3705620..3706351 1 NC_015731.1 TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: nit:NAL212_3185 pseudouridine synthase Rsu; SMART: RNA-binding S4; pseudouridine synthase 3706351 10935601 Nit79A3_3493 Nitrosomonas sp. Is79A3 pseudouridine synthase YP_004696613.1 3705620 D 261292 CDS YP_004696614.1 339484828 10935602 3706419..3707693 1 NC_015731.1 PFAM: Methyltransferase type 12; KEGG: rrj:RrIowa_0829 methyltransferase; type 12 methyltransferase 3707693 10935602 Nit79A3_3494 Nitrosomonas sp. Is79A3 type 12 methyltransferase YP_004696614.1 3706419 D 261292 CDS YP_004696615.1 339484829 10935603 3707709..3707942 1 NC_015731.1 KEGG: nit:NAL212_3184 hypothetical protein; hypothetical protein 3707942 10935603 Nit79A3_3495 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696615.1 3707709 D 261292 CDS YP_004696616.1 339484830 10935604 3708033..3709697 1 NC_015731.1 TIGRFAM: ATP-binding cassette protein, ChvD family; PFAM: ABC transporter-like; KEGG: nit:NAL212_3183 ATP-binding cassette protein, ChvD family; SMART: ATPase, AAA+ type, core; ATP-binding cassette protein, ChvD family 3709697 10935604 Nit79A3_3496 Nitrosomonas sp. Is79A3 ATP-binding cassette protein, ChvD family YP_004696616.1 3708033 D 261292 CDS YP_004696617.1 339484831 10935605 3709743..3709922 1 NC_015731.1 KEGG: tgr:Tgr7_1278 hypothetical protein; hypothetical protein 3709922 10935605 Nit79A3_3497 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696617.1 3709743 D 261292 CDS YP_004696618.1 339484832 10935606 3709973..3710206 1 NC_015731.1 PFAM: CopG-like DNA-binding; KEGG: mrb:Mrub_0379 CopG domain-containing protein DNA-binding domain-containing protein; CopG family transcriptional regulator 3710206 10935606 Nit79A3_3498 Nitrosomonas sp. Is79A3 CopG family transcriptional regulator YP_004696618.1 3709973 D 261292 CDS YP_004696619.1 339484833 10935607 3710184..3711287 1 NC_015731.1 PFAM: RecF/RecN/SMC protein, N-terminal; KEGG: gvi:gll1843 hypothetical protein; SMC domain-containing protein 3711287 10935607 Nit79A3_3499 Nitrosomonas sp. Is79A3 SMC domain-containing protein YP_004696619.1 3710184 D 261292 CDS YP_004696620.1 339484834 10935608 3711256..3711984 1 NC_015731.1 KEGG: gvi:gll1842 hypothetical protein; hypothetical protein 3711984 10935608 Nit79A3_3500 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696620.1 3711256 D 261292 CDS YP_004696621.1 339484835 10935609 complement(3712131..3715307) 1 NC_015731.1 PFAM: Protein of unknown function DUF748; KEGG: nit:NAL212_2894 hypothetical protein; hypothetical protein 3715307 10935609 Nit79A3_3501 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696621.1 3712131 R 261292 CDS YP_004696622.1 339484836 10935610 complement(3715489..3715953) 1 NC_015731.1 PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: nit:NAL212_2893 peptidylprolyl isomerase; FKBP-type peptidylprolyl isomerase 3715953 10935610 Nit79A3_3502 Nitrosomonas sp. Is79A3 FKBP-type peptidylprolyl isomerase YP_004696622.1 3715489 R 261292 CDS YP_004696623.1 339484837 10935611 3716144..3716611 1 NC_015731.1 PFAM: Protein of unknown function DUF454; KEGG: nit:NAL212_2892 hypothetical protein; hypothetical protein 3716611 10935611 Nit79A3_3503 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696623.1 3716144 D 261292 CDS YP_004696624.1 339484838 10935612 3716772..3716984 1 NC_015731.1 hypothetical protein 3716984 10935612 Nit79A3_3504 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696624.1 3716772 D 261292 CDS YP_004696625.1 339484839 10935613 3717077..3718594 1 NC_015731.1 TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3; KEGG: nit:NAL212_0245 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: Chemotaxis methyl-accepting receptor, signalling; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 3718594 10935613 Nit79A3_3505 Nitrosomonas sp. Is79A3 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor YP_004696625.1 3717077 D 261292 CDS YP_004696626.1 339484840 10935614 3718805..3719038 1 NC_015731.1 KEGG: psa:PST_1428 lipoprotein; hypothetical protein 3719038 10935614 Nit79A3_3506 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696626.1 3718805 D 261292 CDS YP_004696627.1 339484841 10935615 3719035..3719394 1 NC_015731.1 KEGG: nhl:Nhal_2691 hypothetical protein; hypothetical protein 3719394 10935615 Nit79A3_3507 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696627.1 3719035 D 261292 CDS YP_004696628.1 339484842 10935616 3719484..3720947 1 NC_015731.1 KEGG: nit:NAL212_2891 hypothetical protein; hypothetical protein 3720947 10935616 Nit79A3_3508 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696628.1 3719484 D 261292 CDS YP_004696629.1 339484843 10935617 3721088..3722233 1 NC_015731.1 TIGRFAM: Diguanylate cyclase, predicted; Haemerythrin-like, metal-binding; PFAM: Diguanylate cyclase, predicted; Haemerythrin/HHE cation-binding motif; KEGG: ttu:TERTU_4682 HHE/GGDEF domain-containing protein; SMART: Diguanylate cyclase, predicted; diguanylate cyclase with hemerythrin-like metal-binding domain 3722233 10935617 Nit79A3_3509 Nitrosomonas sp. Is79A3 diguanylate cyclase with hemerythrin-like metal-binding domain YP_004696629.1 3721088 D 261292 CDS YP_004696630.1 339484844 10935618 complement(3722286..3723308) 1 NC_015731.1 PFAM: VanZ like protein; KEGG: nit:NAL212_2886 VanZ family protein; VanZ family protein 3723308 10935618 Nit79A3_3510 Nitrosomonas sp. Is79A3 VanZ family protein YP_004696630.1 3722286 R 261292 CDS YP_004696631.1 339484845 10935619 complement(3723671..3724201) 1 NC_015731.1 KEGG: nit:NAL212_2885 T/U mismatch-specific DNA glycosylase; T/U mismatch-specific DNA glycosylase 3724201 10935619 Nit79A3_3511 Nitrosomonas sp. Is79A3 T/U mismatch-specific DNA glycosylase YP_004696631.1 3723671 R 261292 CDS YP_004696632.1 339484846 10935620 complement(3724214..3724954) 1 NC_015731.1 TIGRFAM: Phosphoglycerate mutase 1; HAMAP: Phosphoglycerate mutase 1; KEGG: nit:NAL212_2884 phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 3724954 10935620 Nit79A3_3512 Nitrosomonas sp. Is79A3 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_004696632.1 3724214 R 261292 CDS YP_004696633.1 339484847 10935621 complement(3724960..3726024) 1 NC_015731.1 PFAM: Fatty acid desaturase, type 1; KEGG: nit:NAL212_2883 fatty acid desaturase; fatty acid desaturase 3726024 10935621 Nit79A3_3513 Nitrosomonas sp. Is79A3 fatty acid desaturase YP_004696633.1 3724960 R 261292 CDS YP_004696634.1 339484848 10935622 complement(3726047..3726508) 1 NC_015731.1 KEGG: nit:NAL212_2882 hypothetical protein; hypothetical protein 3726508 10935622 Nit79A3_3514 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696634.1 3726047 R 261292 CDS YP_004696635.1 339484849 10935623 complement(3726505..3727275) 1 NC_015731.1 PFAM: Nucleotidyl transferase; KEGG: nit:NAL212_2881 nucleotidyl transferase; Nucleotidyl transferase 3727275 10935623 Nit79A3_3515 Nitrosomonas sp. Is79A3 Nucleotidyl transferase YP_004696635.1 3726505 R 261292 CDS YP_004696636.1 339484850 10935624 complement(3727300..3728475) 1 NC_015731.1 PFAM: Aminotransferase, class V/Cysteine desulfurase; KEGG: nit:NAL212_2880 cysteine desulfurase; class V aminotransferase 3728475 10935624 Nit79A3_3516 Nitrosomonas sp. Is79A3 class V aminotransferase YP_004696636.1 3727300 R 261292 CDS YP_004696637.1 339484851 10935625 3728640..3729698 1 NC_015731.1 KEGG: hba:Hbal_2404 hypothetical protein; hypothetical protein 3729698 10935625 Nit79A3_3517 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696637.1 3728640 D 261292 CDS YP_004696638.1 339484852 10935626 3729832..3731121 1 NC_015731.1 KEGG: nha:Nham_1072 tetratricopeptide TPR_2; hypothetical protein 3731121 10935626 Nit79A3_3518 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696638.1 3729832 D 261292 CDS YP_004696639.1 339484853 10935627 3731183..3732856 1 NC_015731.1 PFAM: Regulator of K+ conductance, N-terminal; KEGG: mpd:MCP_2384 hypothetical protein; TrkA-N domain-containing protein 3732856 10935627 Nit79A3_3519 Nitrosomonas sp. Is79A3 TrkA-N domain-containing protein YP_004696639.1 3731183 D 261292 CDS YP_004696640.1 339484854 10935628 3732849..3734930 1 NC_015731.1 KEGG: bxe:Bxe_C1257 hypothetical protein; hypothetical protein 3734930 10935628 Nit79A3_3520 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696640.1 3732849 D 261292 CDS YP_004696641.1 339484855 10935629 complement(3735110..3736138) 1 NC_015731.1 SMART: Toll-Interleukin receptor; KEGG: pph:Ppha_1040 protein of unknown function DUF323; TIR protein 3736138 10935629 Nit79A3_3521 Nitrosomonas sp. Is79A3 TIR protein YP_004696641.1 3735110 R 261292 CDS YP_004696642.1 339484856 10935630 complement(3736412..3737014) 1 NC_015731.1 PFAM: Rickettsia 17kDa surface antigen; KEGG: net:Neut_2403 OmpA/MotB domain-containing protein; hypothetical protein 3737014 10935630 Nit79A3_3522 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696642.1 3736412 R 261292 CDS YP_004696643.1 339484857 10935631 complement(3737044..3738387) 1 NC_015731.1 KEGG: azo:azo3774 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; serine/threonine protein kinase 3738387 10935631 Nit79A3_3523 Nitrosomonas sp. Is79A3 serine/threonine protein kinase YP_004696643.1 3737044 R 261292 CDS YP_004696644.1 339484858 10935632 complement(3738416..3739255) 1 NC_015731.1 KEGG: gau:GAU_3833 phosphoprotein phosphatase; PFAM: Protein phosphatase 2C, N-terminal; SMART: Protein phosphatase 2C-related; Ser/Thr phosphatase 3739255 10935632 Nit79A3_3524 Nitrosomonas sp. Is79A3 Ser/Thr phosphatase YP_004696644.1 3738416 R 261292 CDS YP_004696645.1 339484859 10935633 complement(3739280..3741007) 1 NC_015731.1 KEGG: gau:GAU_3831 hypothetical protein; PFAM: Forkhead-associated; SMART: Forkhead-associated; Forkhead-associated protein 3741007 10935633 Nit79A3_3525 Nitrosomonas sp. Is79A3 Forkhead-associated protein YP_004696645.1 3739280 R 261292 CDS YP_004696646.1 339484860 10935634 complement(3741438..3742133) 1 NC_015731.1 KEGG: nit:NAL212_0228 HhH-GPD family protein; PFAM: HhH-GPD domain; SMART: HhH-GPD domain; HhH-GPD family protein 3742133 10935634 Nit79A3_3526 Nitrosomonas sp. Is79A3 HhH-GPD family protein YP_004696646.1 3741438 R 261292 CDS YP_004696647.1 339484861 10935635 3742373..3742819 1 NC_015731.1 TIGRFAM: MraZ; HAMAP: MraZ; KEGG: nit:NAL212_0229 MraZ protein; PFAM: MraZ domain; Protein mraZ 3742819 10935635 Nit79A3_3527 Nitrosomonas sp. Is79A3 Protein mraZ YP_004696647.1 3742373 D 261292 CDS YP_004696648.1 339484862 10935636 3742840..3743778 1 NC_015731.1 TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; KEGG: nit:NAL212_0230 S-adenosyl-methyltransferase MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; Ribosomal RNA small subunit methyltransferase H 3743778 10935636 Nit79A3_3528 Nitrosomonas sp. Is79A3 Ribosomal RNA small subunit methyltransferase H YP_004696648.1 3742840 D 261292 CDS YP_004696649.1 339484863 10935637 3743783..3744085 1 NC_015731.1 KEGG: nit:NAL212_0231 cell division protein FtsL; TIGRFAM: Cell division protein, FtsL -like; PFAM: Cell division protein FtsL; cell division protein FtsL 3744085 10935637 Nit79A3_3529 Nitrosomonas sp. Is79A3 cell division protein FtsL YP_004696649.1 3743783 D 261292 CDS YP_004696650.1 339484864 10935638 3744082..3745812 1 NC_015731.1 PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: nit:NAL212_0232 peptidoglycan glycosyltransferase; penicillin-binding protein transpeptidase 3745812 10935638 Nit79A3_3530 Nitrosomonas sp. Is79A3 penicillin-binding protein transpeptidase YP_004696650.1 3744082 D 261292 CDS YP_004696651.1 339484865 10935639 3745818..3747359 1 NC_015731.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; HAMAP: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: nit:NAL212_0233 UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 3747359 10935639 Nit79A3_3531 Nitrosomonas sp. Is79A3 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase YP_004696651.1 3745818 D 261292 CDS YP_004696652.1 339484866 10935640 3747362..3748765 1 NC_015731.1 KEGG: nit:NAL212_0234 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 3748765 10935640 Nit79A3_3532 Nitrosomonas sp. Is79A3 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase YP_004696652.1 3747362 D 261292 CDS YP_004696653.1 339484867 10935641 3748756..3749841 1 NC_015731.1 TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; KEGG: nit:NAL212_0235 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; Phospho-N-acetylmuramoyl-pentapeptide- transferase 3749841 10935641 Nit79A3_3533 Nitrosomonas sp. Is79A3 Phospho-N-acetylmuramoyl-pentapeptide- transferase YP_004696653.1 3748756 D 261292 CDS YP_004696654.1 339484868 10935642 3749784..3751253 1 NC_015731.1 TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; KEGG: nit:NAL212_0236 UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal; UDP-N-acetylmuramoylalanine--D-glutamate ligase 3751253 10935642 Nit79A3_3534 Nitrosomonas sp. Is79A3 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_004696654.1 3749784 D 261292 CDS YP_004696655.1 339484869 10935643 3751257..3752417 1 NC_015731.1 KEGG: nit:NAL212_0237 cell division protein FtsW; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein; cell division protein FtsW 3752417 10935643 Nit79A3_3535 Nitrosomonas sp. Is79A3 cell division protein FtsW YP_004696655.1 3751257 D 261292 CDS YP_004696656.1 339484870 10935644 3752414..3753505 1 NC_015731.1 TIGRFAM: N-acetylglucosaminyltransferase, MurG; HAMAP: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: nit:NAL212_0238 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyl transferase, family 28, C-terminal; Glycosyl transferase, family 28; UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 3753505 10935644 Nit79A3_3536 Nitrosomonas sp. Is79A3 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase YP_004696656.1 3752414 D 261292 CDS YP_004696657.1 339484871 10935645 3753495..3754922 1 NC_015731.1 TIGRFAM: UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; KEGG: nit:NAL212_0239 UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; UDP-N-acetylmuramate--L-alanine ligase 3754922 10935645 Nit79A3_3537 Nitrosomonas sp. Is79A3 UDP-N-acetylmuramate--L-alanine ligase YP_004696657.1 3753495 D 261292 CDS YP_004696658.1 339484872 10935646 3754912..3755925 1 NC_015731.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: nit:NAL212_0240 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; UDP-N-acetylenolpyruvoylglucosamine reductase 3755925 10935646 Nit79A3_3538 Nitrosomonas sp. Is79A3 UDP-N-acetylenolpyruvoylglucosamine reductase YP_004696658.1 3754912 D 261292 CDS YP_004696659.1 339484873 10935647 3755925..3756842 1 NC_015731.1 TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: nit:NAL212_0241 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; D-alanine--D-alanine ligase 3756842 10935647 Nit79A3_3539 Nitrosomonas sp. Is79A3 D-alanine--D-alanine ligase YP_004696659.1 3755925 D 261292 CDS YP_004696660.1 339484874 10935648 3756832..3757608 1 NC_015731.1 PFAM: Cell division protein FtsQ; Polypeptide-transport-associated, FtsQ-type; KEGG: nit:NAL212_0242 cell division protein FtsQ; cell division protein FtsQ 3757608 10935648 Nit79A3_3540 Nitrosomonas sp. Is79A3 cell division protein FtsQ YP_004696660.1 3756832 D 261292 CDS YP_004696661.1 339484875 10935649 3757629..3758867 1 NC_015731.1 KEGG: nit:NAL212_0243 cell division protein FtsA; TIGRFAM: Cell division protein family FtsA; PFAM: Cell division protein FtsA domain; cell division protein FtsA 3758867 10935649 Nit79A3_3541 Nitrosomonas sp. Is79A3 cell division protein FtsA YP_004696661.1 3757629 D 261292 CDS YP_004696662.1 339484876 10935650 3758936..3760087 1 NC_015731.1 KEGG: nit:NAL212_0244 cell division protein FtsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; cell division protein FtsZ 3760087 10935650 Nit79A3_3542 Nitrosomonas sp. Is79A3 cell division protein FtsZ YP_004696662.1 3758936 D 261292 CDS YP_004696663.1 339484877 10935651 complement(3760204..3762801) 1 NC_015731.1 PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; MCP methyltransferase, CheR-type; PAS fold-4; KEGG: aeh:Mlg_1118 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; SMART: MCP methyltransferase, CheR-type; chemotaxis protein CheR 3762801 10935651 Nit79A3_3543 Nitrosomonas sp. Is79A3 chemotaxis protein CheR YP_004696663.1 3760204 R 261292 CDS YP_004696664.1 339484878 10935652 complement(3762873..3763484) 1 NC_015731.1 KEGG: aeh:Mlg_1115 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 3763484 10935652 Nit79A3_3544 Nitrosomonas sp. Is79A3 Crp/Fnr family transcriptional regulator YP_004696664.1 3762873 R 261292 CDS YP_004696665.1 339484879 10935654 complement(3763942..3765525) 1 NC_015731.1 KEGG: nit:NAL212_0062 transposase IS66; manually curated; PFAM: Transposase, IS66; transposase IS66 3765525 10935654 Nit79A3_3546 Nitrosomonas sp. Is79A3 transposase IS66 YP_004696665.1 3763942 R 261292 CDS YP_004696666.1 339484880 10935655 complement(3765575..3765922) 1 NC_015731.1 KEGG: nit:NAL212_0063 IS66 Orf2 family protein; manually curated; PFAM: Transposase (), IS66 Orf2 like; IS66 Orf2 family protein 3765922 10935655 Nit79A3_3547 Nitrosomonas sp. Is79A3 IS66 Orf2 family protein YP_004696666.1 3765575 R 261292 CDS YP_004696667.1 339484881 10935656 complement(3765913..3766203) 1 NC_015731.1 KEGG: nit:NAL212_0064 hypothetical protein; hypothetical protein 3766203 10935656 Nit79A3_3548 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696667.1 3765913 R 261292 CDS YP_004696668.1 339484882 10935657 complement(3766252..3766527) 1 NC_015731.1 KEGG: aeh:Mlg_1117 PAS/PAC sensor protein; hypothetical protein 3766527 10935657 Nit79A3_3549 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696668.1 3766252 R 261292 CDS YP_004696669.1 339484883 10935658 complement(3766739..3767191) 1 NC_015731.1 KEGG: neu:NE2057 hypothetical protein; hypothetical protein 3767191 10935658 Nit79A3_3550 Nitrosomonas sp. Is79A3 hypothetical protein YP_004696669.1 3766739 R 261292 CDS YP_004696670.1 339484884 10935659 complement(3767252..3769273) 1 NC_015731.1 PFAM: Copper resistance D; Cytochrome c, class I; KEGG: neu:NE2058 cytochrome c, class IC:cytochrome c, class I; copper resistance D domain-containing protein 3769273 10935659 Nit79A3_3551 Nitrosomonas sp. Is79A3 copper resistance D domain-containing protein YP_004696670.1 3767252 R 261292 CDS YP_004696671.1 339484885 10935660 complement(3769280..3769684) 1 NC_015731.1 PFAM: Copper resistance protein CopC, core; KEGG: nmu:Nmul_A2761 copper resistance protein CopC; copper resistance protein CopC 3769684 10935660 Nit79A3_3552 Nitrosomonas sp. Is79A3 copper resistance protein CopC YP_004696671.1 3769280 R 261292 CDS YP_004696672.1 339484886 10935661 complement(3770461..3771285) 1 NC_015731.1 TIGRFAM: Bacitracin resistance protein BacA; HAMAP: Undecaprenyl-diphosphatase; KEGG: nit:NAL212_3187 undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; UDP-diphosphatase 3771285 10935661 Nit79A3_3553 Nitrosomonas sp. Is79A3 UDP-diphosphatase YP_004696672.1 3770461 R 261292 CDS YP_004696673.1 339484887 10935662 complement(3771346..3773241) 1 NC_015731.1 TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: nit:NAL212_3188 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC; Phosphomethylpyrimidine synthase 3773241 10935662 Nit79A3_3554 Nitrosomonas sp. Is79A3 Phosphomethylpyrimidine synthase YP_004696673.1 3771346 R 261292 CDS YP_004696674.1 339484888 10935663 3773451..3774104 1 NC_015731.1 KEGG: nit:NAL212_3189 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; SMART: Ribosomal RNA adenine methylase transferase, N-terminal; protein-L-isoaspartate(D-aspartate) O-methyltransferase 3774104 10935663 Nit79A3_3555 Nitrosomonas sp. Is79A3 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004696674.1 3773451 D 261292 CDS YP_004696675.1 339484889 10935664 3774193..3775509 1 NC_015731.1 KEGG: nit:NAL212_3190 type I secretion outer membrane protein, TolC family; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein; type I secretion outer membrane protein, TolC family 3775509 10935664 Nit79A3_3556 Nitrosomonas sp. Is79A3 type I secretion outer membrane protein, TolC family YP_004696675.1 3774193 D 261292 CDS YP_004696676.1 339484890 10935665 complement(3775697..3779110) 1 NC_015731.1 PFAM: Mechanosensitive ion channel MscS; KEGG: nit:NAL212_3191 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 3779110 10935665 Nit79A3_3557 Nitrosomonas sp. Is79A3 mechanosensitive ion channel MscS YP_004696676.1 3775697 R 261292 CDS YP_004696677.1 339484891 10935667 3779845..3781239 1 NC_015731.1 KEGG: nit:NAL212_3192 poly(A) polymerase; TIGRFAM: Poly(A) polymerase, PcnB; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase 3781239 10935667 Nit79A3_3558 Nitrosomonas sp. Is79A3 poly(A) polymerase YP_004696677.1 3779845 D 261292 CDS YP_004696678.1 339484892 10935668 3781252..3781746 1 NC_015731.1 KEGG: nit:NAL212_3193 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3781746 10935668 Nit79A3_3559 Nitrosomonas sp. Is79A3 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_004696678.1 3781252 D 261292 CDS YP_004696679.1 339484893 10935669 3781803..3782594 1 NC_015731.1 TIGRFAM: Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; KEGG: nit:NAL212_3194 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3782594 10935669 Nit79A3_3560 Nitrosomonas sp. Is79A3 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_004696679.1 3781803 D 261292 CDS YP_004696680.1 339484894 10935670 3782609..3783433 1 NC_015731.1 TIGRFAM: Pantoate-beta-alanine ligase; Cytidyltransferase-related; HAMAP: Pantoate-beta-alanine ligase; KEGG: nit:NAL212_3195 pantothenate synthetase; PFAM: Pantoate-beta-alanine ligase; Pantothenate synthetase 3783433 10935670 Nit79A3_3561 Nitrosomonas sp. Is79A3 Pantothenate synthetase YP_004696680.1 3782609 D 261292 CDS