-- dump date   	20140619_164436
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_004293219.1	KEGG: dat:HRM2_09780 hypothetical protein; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Uncharacterised protein family UPF0156/MetJ /Arc repressor
YP_004293220.1	PFAM: Plasmid stabilisation system; KEGG: dat:HRM2_09770 hypothetical protein
YP_004293221.1	PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: app:CAP2UW1_4555 integrase family protein
YP_004293222.1	TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: mms:mma_1754 putative transcriptional regulator MerR; SMART: HTH transcriptional regulator, MerR
YP_004293223.1	PFAM: Mercuric transport protein MerT; KEGG: sty:HCM1.152 putative mercuric transport protein
YP_004293224.1	KEGG: net:Neut_2569 mercuric transport protein periplasmic component; TIGRFAM: Mercuric transport protein periplasmic component; PFAM: Heavy metal transport/detoxification protein
YP_004293225.1	KEGG: neu:NE0840 putative mercury transport protein MerC
YP_004293226.1	TIGRFAM: Mercury reductase, MerA; KEGG: see:SNSL254_p_0165 putative mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; Heavy metal transport/detoxification protein; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
YP_004293227.1	KEGG: app:CAP2UW1_4618 hypothetical protein
YP_004293228.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: axy:AXYL_06548 transglycosylase SLT domain-containing protein 6
YP_004293229.1	KEGG: pau:PA14_15540 putative mating pair formation protein TrbL; TIGRFAM: Conjugal transfer, TrbL; PFAM: Conjugal transfer, TrbL/VirB6
YP_004293230.1	KEGG: bce:BC3874 hypothetical protein
YP_004293231.1	TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: axy:AXYL_06544 P-type conjugative transfer protein TrbJ
YP_004293232.1	PFAM: Type IV secretion system, VirB10 / TraB / TrbI; KEGG: bam:Bamb_6628 conjugal transfer protein TrbI
YP_004293233.1	PFAM: Conjugal transfer, TrbH; KEGG: app:CAP2UW1_4726 conjugal transfer protein TrbH
YP_004293234.1	KEGG: eba:p2B6 conjugal transfer protein TrbG; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer, TrbG/VirB9/CagX
YP_004293235.1	PFAM: VirB8; KEGG: app:CAP2UW1_4728 conjugal transfer protein TrbF
YP_004293236.1	TIGRFAM: CagE, TrbE, VirB component of type IV transporter system; PFAM: CagE, TrbE, VirB component of type IV transporter system, central domain; KEGG: app:CAP2UW1_4729 conjugal transfer protein TrbE; SMART: ATPase, AAA+ type, core
YP_004293237.1	KEGG: ajs:Ajs_4272 conjugal transfer protein TrbD
YP_004293238.1	PFAM: Conjugal transfer,TrbC; KEGG: eba:p2B3 conjugal transfer protein TrbC
YP_004293239.1	PFAM: Transposase, IS4-like; KEGG: atu:Atu4436 IS5 family transposase
YP_004293240.1	KEGG: app:CAP2UW1_4733 conjugal transfer protein TrbA; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004293242.1	TIGRFAM: ParB-like partition protein; PFAM: Transcriptional repressor protein, KorB; ParB-like nuclease; KEGG: axy:AXYL_06612 transcriptional repressor protein KorB; SMART: ParB-like nuclease
YP_004293243.1	KEGG: eba:p2A235 putative conjugation protein TraO
YP_004293244.1	PFAM: PilT protein, N-terminal; KEGG: rmr:Rmar_0550 PilT protein domain protein
YP_004293245.1	PFAM: Protein of unknown function DUF2191; KEGG: gpb:HDN1F_25630 hypothetical protein
YP_004293246.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mea:Mex_p20006 hypothetical protein
YP_004293247.1	KEGG: mch:Mchl_3698 hypothetical protein
YP_004293248.1	TIGRFAM: Transcription regulator AbrB; PFAM: Transcription regulator AbrB/SpoV, predicted; KEGG: gur:Gura_3174 AbrB family transcriptional regulator; SMART: Transcription regulator AbrB/SpoV, predicted
YP_004293249.1	SMART: ATPase, AAA+ type, core; KEGG: phe:Phep_1072 AAA ATPase
YP_004293250.1	PFAM: Protein of unknown function DUF433; KEGG: hde:HDEF_1049 hypothetical protein
YP_004293251.1	KEGG: nmu:Nmul_B2812 hypothetical protein
YP_004293252.1	KEGG: llo:LLO_2896 TraM protein
YP_004293253.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: reu:Reut_D6529 conjugal transfer protein TraL
YP_004293254.1	KEGG: xfn:XfasM23_2251 hypothetical protein
YP_004293255.1	KEGG: bcj:BCAL0172 conjugal transfer relaxosome component TraJ
YP_004293256.1	PFAM: Endonuclease relaxase, MobA/VirD2; KEGG: app:CAP2UW1_4640 conjugal transfer relaxase TraI
YP_004293257.1	PFAM: Ti-type conjugative transfer system, TraG-like; KEGG: app:CAP2UW1_4641 conjugal transfer coupling protein TraG
YP_004293258.1	KEGG: bam:Bamb_6613 conjugal transfer peptidase TraF; TIGRFAM: Peptidase S26C, conjugative transfer signal peptidase TraF; PFAM: Peptidase S26, conserved region
YP_004293259.1	KEGG: eba:p2B16 conjugal transfer protein, TraD
YP_004293260.1	KEGG: app:CAP2UW1_4644 hypothetical protein; PFAM: Domain of unknown function DUF1738; Toprim domain; SMART: Toprim domain
YP_004293261.1	PFAM: Uncharacterised protein family UPF0758; KEGG: cpi:Cpin_1532 DNA repair protein RadC
YP_004293262.1	PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_3025 transposase IS4 family protein
YP_004293263.1	KEGG: nmu:Nmul_A1680 cytochrome c family protein
YP_004293264.1	KEGG: saq:Sare_4146 dipeptidyl-peptidase IV
YP_004293265.1	SMART: Regulatory protein, FmdB, putative; manually curated; KEGG: nhl:Nhal_2319 regulatory protein, FmdB family; TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative
YP_004293266.1	KEGG: mmi:MMAR_1420 carbonic anhydrase, CynT; PFAM: Carbonic anhydrase; SMART: Carbonic anhydrase
YP_004293267.1	KEGG: nhl:Nhal_3060 sigma-54 factor interaction domain-containing protein; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_004293268.1	KEGG: nmu:Nmul_A1630 hypothetical protein
YP_004293269.1	TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; ATPase, P-type, heavy metal translocating; KEGG: nmu:Nmul_A2005 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase
YP_004293270.1	KEGG: nmu:Nmul_A1630 hypothetical protein
YP_004293271.1	PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit
YP_004293272.1	PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein
YP_004293273.1	SMART: ATPase, P-type cation-transporter, N-terminal; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: lpp:lpp2364 hypothetical protein; PFAM: ATPase, P-type, ATPase-associated domain; ATPase, P-type cation-transporter, C-terminal; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase
YP_004293274.1	PFAM: Methyltransferase type 11; KEGG: aoe:Clos_1084 methyltransferase type 11
YP_004293275.1	KEGG: nmu:Nmul_A1406 heavy metal efflux pump CzcA; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein
YP_004293276.1	KEGG: nmu:Nmul_A1407 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Copper binding periplasmic protein CusF
YP_004293277.1	PFAM: Outer membrane efflux protein; KEGG: nmu:Nmul_A1408 outer membrane efflux protein
YP_004293278.1	PFAM: Copper binding periplasmic protein CusF; KEGG: tbd:Tbd_1326 hypothetical protein
YP_004293279.1	KEGG: ppp:PHYPADRAFT_178680 hypothetical protein
YP_004293280.1	KEGG: nmu:Nmul_A1630 hypothetical protein
YP_004293281.1	KEGG: rso:RSp0584 ISRSO9-transposase protein
YP_004293282.1	PFAM: PemK-like protein; KEGG: neu:NE1181 PemK-like protein
YP_004293283.1	KEGG: neu:NE1182 CopG family protein
YP_004293284.1	TIGRFAM: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; KEGG: net:Neut_0001 chromosomal replication initiation protein; SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core
YP_004293285.1	SMART: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; KEGG: nmu:Nmul_A0002 DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain, central; DNA polymerase III, beta chain, C-terminal; DNA polymerase III, beta chain, N-terminal
YP_004293286.1	SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain; TIGRFAM: DNA gyrase, subunit B; KEGG: nmu:Nmul_A0003 DNA gyrase subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; DNA topoisomerase, type IIA, subunit B, C-terminal
YP_004293287.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: lba:Lebu_1528 endonuclease/exonuclease/phosphatase
YP_004293288.1	KEGG: nmu:Nmul_A1770 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal
YP_004293289.1	PFAM: Ornithine cyclodeaminase/mu-crystallin; KEGG: mlo:mlr2282 ornithine cyclodeaminase
YP_004293290.1	KEGG: neu:NE2387 hypothetical protein
YP_004293291.1	PFAM: Divalent ion tolerance protein, CutA1; KEGG: net:Neut_0847 CutA1 divalent ion tolerance protein
YP_004293292.1	KEGG: net:Neut_0846 protein-disulfide reductase; PFAM: Cytochrome c assembly protein, transmembrane domain; Thioredoxin domain
YP_004293293.1	PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: nmu:Nmul_A2682 thioredoxin
YP_004293294.1	PFAM: Transport-associated; KEGG: net:Neut_0492 transport-associated
YP_004293295.1	PFAM: Protein of unknown function DUF2784; KEGG: net:Neut_1861 hypothetical protein
YP_004293296.1	PFAM: tRNA(Ile)-lysidine/2-thiocytidine synthase; KEGG: nmu:Nmul_A0509 C32 tRNA thiolase
YP_004293297.1	PFAM: Blue (type 1) copper domain; KEGG: neu:NE1491 putative copper-containing oxidoreductase signal peptide protein
YP_004293298.1	PFAM: Protein of unknown function DUF411; KEGG: net:Neut_0755 hypothetical protein
YP_004293299.1	PFAM: Cytochrome c, class I; KEGG: nmu:Nmul_A0573 cytochrome c, class I
YP_004293300.1	KEGG: neu:NE2318 hypothetical protein
YP_004293301.1	KEGG: nmu:Nmul_A0435 phosphate uptake regulator, PhoU; TIGRFAM: PhoU; PFAM: PhoU
YP_004293302.1	TIGRFAM: Ribose 5-phosphate isomerase, type A; KEGG: net:Neut_1829 ribose-5-phosphate isomerase A; PFAM: Ribose 5-phosphate isomerase, type A
YP_004293303.1	TIGRFAM: Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Ketose-bisphosphate aldolase, class-II; KEGG: nmu:Nmul_A0384 fructose-1,6-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II
YP_004293304.1	TIGRFAM: Pyruvate kinase; KEGG: nmu:Nmul_A0385 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like
YP_004293305.1	HAMAP: Phosphoglycerate kinase; KEGG: neu:NE0326 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase
YP_004293306.1	SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: nmu:Nmul_A0387 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
YP_004293307.1	SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Transketolase, bacterial-like; KEGG: nmu:Nmul_A0388 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal
YP_004293308.1	PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; KEGG: neu:NE1616 glutamate dehydrogenase; SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal
YP_004293309.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: net:Neut_0502 lytic transglycosylase, catalytic
YP_004293310.1	KEGG: nmu:Nmul_A2451 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase; HAMAP: tRNA nucleotidyltransferase, proteobacteria; PFAM: Poly A polymerase, head domain; Metal-dependent phosphohydrolase, HD subdomain
YP_004293311.1	KEGG: mag:amb3422 hypothetical protein
YP_004293312.1	KEGG: dat:HRM2_17520 hypothetical protein
YP_004293313.1	PFAM: Ion transport 2; KEGG: nmu:Nmul_A1691 K+ channel, pore region
YP_004293314.1	KEGG: neu:NE0372 hypothetical protein
YP_004293315.1	PFAM: Heat shock protein Hsp20; KEGG: nmu:Nmul_A1762 heat shock protein HSP20
YP_004293316.1	KEGG: nmu:Nmul_A2700 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004293317.1	PFAM: Cytochrome c, class I; KEGG: net:Neut_1652 cytochrome c, class IC:cytochrome c, class I
YP_004293318.1	PFAM: Cytochrome c, class I; KEGG: net:Neut_1651 cytochrome c, class I
YP_004293319.1	PFAM: Protein of unknown function DUF1841; KEGG: neu:NE0737 hypothetical protein
YP_004293320.1	SMART: HhH-GPD domain; Helix-hairpin-helix DNA-binding motif, class 1; Endonuclease III-like, iron-sulphur cluster loop motif; TIGRFAM: Endonuclease III/Nth; KEGG: net:Neut_0644 endonuclease III; PFAM: HhH-GPD domain; Helix-hairpin-helix motif
YP_004293321.1	KEGG: mms:mma_0717 electron transport complex protein RnfB; TIGRFAM: Electron transport complex, RnfB; PFAM: Putative Fe-S cluster; 4Fe-4S binding domain
YP_004293322.1	TIGRFAM: Dihydroorotate dehydrogenase, class 2; KEGG: nmu:Nmul_A2706 dihydroorotate dehydrogenase 2; PFAM: Dihydroorotate dehydrogenase, class 1/ 2
YP_004293323.1	KEGG: nmu:Nmul_A2708 arginyl-tRNA-protein transferase; HAMAP: Arginine-tRNA-protein transferase, predicted, prokaryotic; PFAM: Arginine-tRNA-protein transferase, C-terminal; Arginine-tRNA-protein transferase, N-terminal
YP_004293324.1	TIGRFAM: Leucyl/phenylalanyl-tRNA-protein transferase; KEGG: nmu:Nmul_A2709 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: Leucyl/phenylalanyl-tRNA-protein transferase
YP_004293325.1	KEGG: neu:NE2218 hypothetical protein
YP_004293326.1	TIGRFAM: Allophanate hydrolase; KEGG: nmu:Nmul_A0944 allophanate hydrolase; PFAM: Amidase
YP_004293327.1	SMART: Allophanate hydrolase subunit 2; Biotin carboxylase, C-terminal; Allophanate hydrolase subunit 1; TIGRFAM: Urea carboxylase; Allophanate hydrolase subunit 2; KEGG: nmu:Nmul_A0943 allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; Biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin/lipoyl attachment; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthetase, large subunit, ATP-binding
YP_004293328.1	KEGG: net:Neut_2474 hypothetical protein; TIGRFAM: Urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989
YP_004293329.1	KEGG: nmu:Nmul_A0941 hypothetical protein; TIGRFAM: Urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989
YP_004293330.1	PFAM: Amino acid permease domain; KEGG: nmu:Nmul_A0940 amino acid permease-associated region
YP_004293331.1	PFAM: Exopolysaccharide synthesis, ExoD; KEGG: neu:NE0797 hypothetical protein
YP_004293332.1	KEGG: npu:Npun_R5402 FG-GAP repeat-containing protein; PFAM: FG-GAP; SMART: Integrin alpha beta-propellor
YP_004293333.1	KEGG: cwo:Cwoe_3047 hypothetical protein
YP_004293334.1	TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: hse:Hsero_1607 transcription regulator protein; SMART: HTH transcriptional regulator, MerR
YP_004293335.1	KEGG: fbc:FB2170_15773 TPR repeat protein
YP_004293336.1	KEGG: dmo:Dmoj_GI23312 GI23312 gene product from transcript GI23312-RA
YP_004293337.1	PFAM: Outer membrane efflux protein; KEGG: nmu:Nmul_A1408 outer membrane efflux protein
YP_004293338.1	KEGG: nmu:Nmul_A1407 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Copper binding periplasmic protein CusF
YP_004293339.1	KEGG: nmu:Nmul_A1406 heavy metal efflux pump CzcA; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein
YP_004293340.1	PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; Kelch repeat type 1; Cell surface receptor IPT/TIG; KEGG: svo:SVI_3719 serine protease, subtilase family; SMART: Kelch repeat type 1
YP_004293341.1	KEGG: nmu:Nmul_A0139 hypothetical protein
YP_004293342.1	PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: gca:Galf_2918 restriction modification system DNA specificity domain
YP_004293343.1	SMART: ATPase, AAA+ type, core; KEGG: geo:Geob_1221 ATPase
YP_004293344.1	manually curated; KEGG: gca:Galf_2917 site-specific DNA-methyltransferase (adenine-specific); PFAM: DNA methylase, adenine-specific
YP_004293345.1	PFAM: Restriction endonuclease, type I, EcoEI, R subunit/Type III, Res subunit, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; KEGG: gca:Galf_0381 type I site-specific deoxyribonuclease; SMART: DEAD-like helicase, N-terminal
YP_004293346.1	PFAM: Methyltransferase type 11; KEGG: aoe:Clos_1084 methyltransferase type 11
YP_004293347.1	KEGG: neu:NE0981 HhH-GPD; PFAM: HhH-GPD domain; SMART: HhH-GPD domain; Helix-hairpin-helix DNA-binding motif, class 1
YP_004293348.1	KEGG: nmu:Nmul_A2503 cell division protein MraZ; TIGRFAM: MraZ; PFAM: MraZ domain
YP_004293349.1	KEGG: nmu:Nmul_A2502 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW
YP_004293350.1	KEGG: mfa:Mfla_2276 cell division protein, FtsL -like protein; TIGRFAM: Cell division protein, FtsL -like; PFAM: Cell division protein FtsL
YP_004293351.1	KEGG: nmu:Nmul_A2500 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain
YP_004293352.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: neu:NE0986 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal
YP_004293353.1	TIGRFAM: UDP-MurNAc-pentapeptide synthetase; KEGG: nmu:Nmul_A2498 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal
YP_004293354.1	KEGG: nmu:Nmul_A2497 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; PFAM: Glycosyl transferase, family 4
YP_004293355.1	KEGG: neu:NE0989 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal
YP_004293356.1	KEGG: nmu:Nmul_A2495 cell cycle protein; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein
YP_004293357.1	TIGRFAM: N-acetylglucosaminyltransferase, MurG; KEGG: nmu:Nmul_A2494 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: Glycosyl transferase, family 28, C-terminal; Glycosyl transferase, family 28
YP_004293358.1	TIGRFAM: UDP-N-acetylmuramate-alanine ligase; KEGG: nmu:Nmul_A2493 UDP-N-acetylmuramate--L-alanine ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal
YP_004293359.1	TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: neu:NE0993 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal
YP_004293360.1	PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: nmu:Nmul_A2491 D-alanine--D-alanine ligase
YP_004293361.1	PFAM: Cell division protein FtsQ; Polypeptide-transport-associated, FtsQ-type; KEGG: net:Neut_0242 polypeptide-transport-associated domain-containing protein
YP_004293362.1	TIGRFAM: Cell division protein family FtsA; PFAM: Cell division protein FtsA domain; KEGG: neu:NE0996 cell division protein FtsA; SMART: Cell division protein FtsA domain
YP_004293363.1	TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; KEGG: net:Neut_0240 cell division protein FtsZ; SMART: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain
YP_004293364.1	TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; PAS fold-3; KEGG: mfa:Mfla_1933 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: Chemotaxis methyl-accepting receptor, signalling; PAS; PAC motif; HAMP linker domain
YP_004293365.1	PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase
YP_004293366.1	KEGG: rpd:RPD_0591 DNA helicase, putative
YP_004293367.1	PFAM: DNA-directed DNA polymerase, family B, mitochondria/virus; KEGG: mma:MM_3253 hypothetical protein
YP_004293368.1	KEGG: ppr:PBPRB1378 hypothetical protein
YP_004293369.1	KEGG: abi:Aboo_0388 hypothetical protein
YP_004293370.1	KEGG: abi:Aboo_0389 hypothetical protein
YP_004293371.1	KEGG: bll:BLJ_2035 hypothetical protein
YP_004293372.1	KEGG: mmh:Mmah_1312 CRISPR-associated protein, Cas1 family; TIGRFAM: CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1
YP_004293373.1	KEGG: bce:BC1266 integral membrane protein
YP_004293374.1	KEGG: dat:HRM2_44620 hypothetical protein
YP_004293375.1	KEGG: eba:ebB55 transposase, fragment; manually curated; PFAM: Transposase (putative), IS66 Orf2-like
YP_004293376.1	PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase
YP_004293377.1	TIGRFAM: DNA polymerase III, delta subunit; KEGG: nmu:Nmul_A0513 DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta
YP_004293378.1	PFAM: Lipopolysccharide assembly, LptE; KEGG: nmu:Nmul_A0512 rare lipoprotein B
YP_004293379.1	TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: nmu:Nmul_A0511 leucyl-tRNA synthetase
YP_004293380.1	PFAM: Dodecin flavoprotein; KEGG: mca:MCA3058 hypothetical protein
YP_004293381.1	PFAM: Peptidase M48; KEGG: neu:NE1475 hypothetical protein
YP_004293382.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_C0588 putative dioxygenase
YP_004293383.1	KEGG: net:Neut_1168 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein
YP_004293384.1	KEGG: tbd:Tbd_1622 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004293385.1	KEGG: net:Neut_1587 rare lipoprotein A; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Barwin-related endoglucanase; Sporulation-related domain
YP_004293386.1	KEGG: neu:NE2066 cell cycle proteins; TIGRFAM: Rod shape-determining protein RodA; PFAM: Cell cycle protein
YP_004293387.1	TIGRFAM: Penicillin-binding protein 2; KEGG: nmu:Nmul_A0317 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain
YP_004293388.1	KEGG: nmu:Nmul_A0318 rod shape-determining protein MreD; TIGRFAM: Cell shape-determining protein MreD; PFAM: Cell shape-determining protein MreD
YP_004293389.1	KEGG: neu:NE2069 rod shape-determining protein MreC; TIGRFAM: Rod shape-determining protein MreC, subtype; PFAM: Rod shape-determining protein MreC
YP_004293390.1	KEGG: nmu:Nmul_A0320 rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl
YP_004293391.1	KEGG: nmu:Nmul_A0321 aspartyl/glutamyl-tRNA amidotransferase subunit C; TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit
YP_004293392.1	TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit; KEGG: nmu:Nmul_A0322 aspartyl/glutamyl-tRNA amidotransferase subunit A; PFAM: Amidase
YP_004293393.1	TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Asn/Gln amidotransferase; KEGG: neu:NE2073 aspartyl/glutamyl-tRNA amidotransferase subunit B; SMART: Asn/Gln amidotransferase
YP_004293394.1	KEGG: nwa:Nwat_1721 putative thiol-disulfide oxidoreductase DCC; manually curated; PFAM: Putative thiol-disulphide oxidoreductase DCC
YP_004293395.1	KEGG: tcr:509791.80 hypothetical protein
YP_004293396.1	PFAM: Protein of unknown function DUF2329; Glycosyltransferase 36 associated; Glycosyltransferase 36; Putative carbohydrate binding; KEGG: tbd:Tbd_1304 cyclic beta 1-2 glucan synthetase
YP_004293397.1	PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; KEGG: neu:NE0564 multicopper oxidase type 1
YP_004293398.1	PFAM: Multicopper oxidase, type 3; KEGG: neu:NE0565 hypothetical protein
YP_004293399.1	KEGG: sus:Acid_1755 two component LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain
YP_004293400.1	KEGG: net:Neut_0407 inositol-phosphate phosphatase; PFAM: Inositol monophosphatase
YP_004293401.1	PFAM: Sodium:dicarboxylate symporter; KEGG: hna:Hneap_1097 sodium:dicarboxylate symporter
YP_004293402.1	PFAM: Protein of unknown function DUF466; KEGG: neu:NE2409 hypothetical protein
YP_004293403.1	PFAM: Carbon starvation protein CstA; KEGG: neu:NE2410 carbon starvation protein CstA
YP_004293404.1	KEGG: nmu:Nmul_A2319 putative transcriptional regulator; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote
YP_004293405.1	PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; KEGG: nmu:Nmul_A2318 chromosome segregation and condensation protein ScpA
YP_004293406.1	TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: nmu:Nmul_A2317 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib
YP_004293407.1	PFAM: Peptidase M50; KEGG: net:Neut_2041 peptidase M50
YP_004293408.1	KEGG: neu:NE1725 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal
YP_004293409.1	KEGG: net:Neut_2039 phosphotransferase domain-containing protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal
YP_004293411.1	PFAM: NnrS; KEGG: neu:NE1723 hypothetical protein
YP_004293412.1	KEGG: dpe:Dper_GL15607 GL15607 gene product from transcript GL15607-RA
YP_004293414.1	PFAM: Acyltransferase 3; KEGG: bid:Bind_2849 acyltransferase 3
YP_004293415.1	KEGG: hje:HacjB3_14735 histone deacetylase superfamily protein
YP_004293416.1	KEGG: neu:NE0034 aminotransferase class-V; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_004293417.1	PFAM: Glycosyl transferase, family 4; KEGG: nmu:Nmul_A0632 glycosyl transferase family protein
YP_004293418.1	PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: nmu:Nmul_A0631 polysaccharide biosynthesis protein CapD
YP_004293419.1	KEGG: gca:Galf_0315 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter, transmembrane domain; ABC transporter-like
YP_004293420.1	TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; KEGG: pol:Bpro_4018 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase
YP_004293421.1	TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related; KEGG: net:Neut_2244 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related
YP_004293422.1	TIGRFAM: DNA repair protein RadA; PFAM: Circadian clock protein KaiC/DNA repair protein RadA; Peptidase S16, Lon C-terminal; KEGG: nmu:Nmul_A1803 DNA repair protein RadA; SMART: ATPase, AAA+ type, core
YP_004293423.1	PFAM: Ceramidase; KEGG: nmu:Nmul_A1801 hypothetical protein
YP_004293424.1	KEGG: nmu:Nmul_A0231 acyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase
YP_004293425.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: nmu:Nmul_A0230 NAD-dependent epimerase/dehydratase
YP_004293426.1	PFAM: Phosphopantetheine-binding; KEGG: neu:NE1656 phosphopantetheine attachment site
YP_004293427.1	KEGG: neu:NE1655 aminotransferase class-I; PFAM: Aminotransferase, class I/classII
YP_004293428.1	KEGG: sme:SMc01711 hypothetical protein
YP_004293429.1	KEGG: chu:CHU_2279 PhoH-related protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc
YP_004293430.1	PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region
YP_004293431.1	PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein
YP_004293432.1	PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit
YP_004293433.1	PFAM: Transposase, IS116/IS110/IS902; KEGG: ecp:ECP_4551 putative transposase
YP_004293434.1	KEGG: mms:mma_2809 transposase IstA; PFAM: IstB-like ATP-binding protein; Integrase, catalytic core; SMART: ATPase, AAA+ type, core
YP_004293435.1	KEGG: pmm:PMM1245 hypothetical protein
YP_004293436.1	KEGG: bfo:BRAFLDRAFT_118313 hypothetical protein
YP_004293437.1	KEGG: par:Psyc_1264 hypothetical protein
YP_004293438.1	KEGG: rlg:Rleg_0196 hypothetical protein
YP_004293439.1	KEGG: meh:M301_2200 hypothetical protein
YP_004293440.1	PFAM: Replication initiation factor; KEGG: dar:Daro_1039 hypothetical protein
YP_004293441.1	PFAM: Integrase, catalytic core, phage; KEGG: afr:AFE_0995 site-specific recombinase, phage integrase family
YP_004293442.1	KEGG: neu:NE0270 hypothetical protein
YP_004293443.1	KEGG: mes:Meso_3789 relaxase/mobilization nuclease domain-containing protein
YP_004293444.1	KEGG: cci:CC1G_11100 ankyrin repeat protein
YP_004293445.1	PFAM: Glutaredoxin; KEGG: dsh:Dshi_3931 glutaredoxin
YP_004293446.1	PFAM: Uncharacterised protein family YphA; KEGG: neu:NE1276 hypothetical protein
YP_004293447.1	KEGG: kcr:Kcr_0174 hypothetical protein
YP_004293448.1	KEGG: zin:ZICARI_039 putative cytochrome bo terminal oxidase subunit I/cytochrome bo terminal oxidase subunit III fusion protein
YP_004293449.1	PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase
YP_004293450.1	KEGG: eba:ebB55 transposase, fragment; manually curated; PFAM: Transposase (putative), IS66 Orf2-like
YP_004293451.1	KEGG: dat:HRM2_44620 hypothetical protein
YP_004293452.1	KEGG: sto:ST2108 purine NTPase
YP_004293453.1	KEGG: msv:Mesil_3324 hypothetical protein
YP_004293454.1	KEGG: neu:NE0257 site-specific recombinase; PFAM: Resolvase, N-terminal; SMART: Resolvase, N-terminal
YP_004293455.1	PFAM: Antirestriction; KEGG: hba:Hbal_0654 hypothetical protein
YP_004293456.1	KEGG: bur:Bcep18194_B2516 hypothetical protein; TIGRFAM: Addiction module killer protein, HI1419; PFAM: Protein of unknown function DUF891
YP_004293457.1	TIGRFAM: Addiction module antidote protein, HI1420; KEGG: rfe:RF_1316 transcriptional regulator
YP_004293458.1	KEGG: neu:NE0262 hypothetical protein; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Uncharacterised protein family UPF0156/MetJ /Arc repressor
YP_004293459.1	PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase
YP_004293460.1	PFAM: PHP, C-terminal; KEGG: tin:Tint_3224 SMC domain protein
YP_004293461.1	PFAM: Transposase, IS4-like; Transposase InsH, N-terminal; KEGG: dia:Dtpsy_3344 transposase IS4 family protein
YP_004293462.1	KEGG: pyo:PY01937 hypothetical protein
YP_004293463.1	PFAM: Ti-type conjugative transfer system, TraG-like; KEGG: neu:NE0246 TraG protein
YP_004293464.1	KEGG: neu:NE0245 hypothetical protein
YP_004293465.1	KEGG: neu:NE0243 hypothetical protein
YP_004293466.1	KEGG: neu:NE0242 hypothetical protein
YP_004293467.1	KEGG: tdn:Suden_1398 translocation protein TolB
YP_004293468.1	KEGG: neu:NE0240 hypothetical protein; PFAM: Sel1-like; SMART: Sel1-like
YP_004293469.1	PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase
YP_004293470.1	KEGG: eba:ebB55 transposase, fragment; manually curated; PFAM: Transposase (putative), IS66 Orf2-like
YP_004293471.1	KEGG: dat:HRM2_44620 hypothetical protein
YP_004293472.1	manually curated; KEGG: neu:NE0237 hypothetical protein
YP_004293473.1	KEGG: neu:NE0236 site-specific recombinase; PFAM: Resolvase, N-terminal; SMART: Resolvase, N-terminal
YP_004293474.1	KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004293475.1	PFAM: Integrase, catalytic core; Resolvase, helix-turn-helix domain; KEGG: pst:PSPTO_B0040 ISPsy4, transposase
YP_004293476.1	PFAM: Plasmid stabilisation system; KEGG: bgl:bglu_1g12000 hypothetical protein
YP_004293477.1	KEGG: lpf:lpl1091 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004293478.1	KEGG: mar:MAE_59610 CopG/DNA-binding domain-containing protein
YP_004293479.1	PFAM: Protein of unknown function DUF497; KEGG: mar:MAE_25610 hypothetical protein
YP_004293480.1	KEGG: tps:THAPSDRAFT_268596 hypothetical protein
YP_004293481.1	KEGG: gbm:Gbem_3496 hypothetical protein
YP_004293482.1	PFAM: Replication endonuclease, probable, phage; KEGG: mfa:Mfla_0975 bacteriophage replication gene A
YP_004293483.1	KEGG: ctt:CtCNB1_2438 putative chemotaxis protein MotB
YP_004293484.1	KEGG: hoh:Hoch_6105 hypothetical protein
YP_004293485.1	PFAM: Transposase, mutator type; KEGG: xcv:XCVc0009 transposase mutator family protein
YP_004293487.1	KEGG: shn:Shewana3_2956 hypothetical protein
YP_004293488.1	KEGG: sli:Slin_4371 cell surface receptor IPT/TIG domain protein
YP_004293489.1	TIGRFAM: Dehydroquinase, class II; KEGG: nmu:Nmul_A2754 3-dehydroquinate dehydratase; PFAM: Dehydroquinase, class II
YP_004293490.1	KEGG: nmu:Nmul_A2753 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin/lipoyl attachment
YP_004293491.1	SMART: Biotin carboxylase, C-terminal; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; KEGG: neu:NE0653 biotin carboxylase protein; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase, large subunit, N-terminal
YP_004293492.1	KEGG: nmu:Nmul_A2751 ribosomal protein L11 methyltransferase; TIGRFAM: Ribosomal protein L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase, PrmA
YP_004293493.1	KEGG: net:Neut_1897 zinc finger-domain-containing protein; TIGRFAM: Zinc finger/thioredoxin putative; PFAM: Protein of unknown function DUF3426
YP_004293494.1	TIGRFAM: ATPase, anion-transporting; KEGG: psa:PST_0237 arsenical pump-driving ATPase; SMART: ATPase, AAA+ type, core
YP_004293495.1	PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: psa:PST_0238 arsenic operon regulator
YP_004293496.1	KEGG: mfa:Mfla_1489 arsenical pump membrane protein; TIGRFAM: Arsenical pump membrane protein; PFAM: Arsenical pump membrane protein
YP_004293497.1	KEGG: psa:PST_0240 arsenate reductase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight
YP_004293498.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mca:MCA2265 hypothetical protein
YP_004293499.1	KEGG: cvi:CV_2438 transcription regulator protein, arsenical resistance operon repressor; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_004293500.1	PFAM: Protein of unknown function DUF839; KEGG: nmu:Nmul_A2572 hypothetical protein
YP_004293501.1	PFAM: Diacylglycerol kinase, catalytic domain; KEGG: kfl:Kfla_0201 diacylglycerol kinase catalytic region
YP_004293502.1	TIGRFAM: Conserved hypothetical protein CHP00661; KEGG: mca:MCA2984 hypothetical protein
YP_004293503.1	PFAM: Patatin/Phospholipase A2-related; KEGG: svo:SVI_2442 patatin-like phospholipase family
YP_004293504.1	PFAM: Metallo-dependent phosphatase; KEGG: azl:AZL_006380 metallophosphoesterase
YP_004293505.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: mpt:Mpe_A0052 hydrolase or acyltransferase-like protein
YP_004293506.1	PFAM: Lipase, GDSL; KEGG: hau:Haur_2604 GDSL family lipase
YP_004293507.1	TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: hau:Haur_2603 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase
YP_004293508.1	PFAM: Heparinase II/III-like; KEGG: nde:NIDE2386 hypothetical protein
YP_004293509.1	KEGG: scl:sce6682 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB
YP_004293510.1	KEGG: rca:Rcas_3215 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal
YP_004293511.1	KEGG: tcx:Tcr_2021 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_004293512.1	KEGG: nmu:Nmul_A0507 thiosulphate-binding protein; TIGRFAM: Thiosulphate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_004293513.1	KEGG: nmu:Nmul_A1142 hypothetical protein
YP_004293514.1	TIGRFAM: Ribosomal protein L3-specific, glutamine-N5-methyltransferase; Modification methylase HemK; KEGG: nmu:Nmul_A1854 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; PFAM: Methyltransferase small
YP_004293515.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: nmu:Nmul_A1225 cytidine/deoxycytidylate deaminase, zinc-binding region
YP_004293516.1	PFAM: YkuD domain; KEGG: nmu:Nmul_A1226 ErfK/YbiS/YcfS/YnhG
YP_004293517.1	KEGG: neu:NE2076 LysM motif-containing protein; PFAM: FecR protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_004293518.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; CHASE2; PAS fold; Diguanylate cyclase, predicted; KEGG: neu:NE2075 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted
YP_004293519.1	KEGG: nmu:Nmul_A0437 threonine dehydratase; TIGRFAM: Threonine dehydratase I; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal
YP_004293520.1	KEGG: net:Neut_1161 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain
YP_004293521.1	KEGG: net:Neut_1162 CheA signal transduction histidine kinases; PFAM: Signal transduction response regulator, receiver domain; CheW-like protein; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; ATPase-like, ATP-binding domain; CheW-like protein
YP_004293522.1	KEGG: cro:ROD_02701 hypothetical protein
YP_004293523.1	TIGRFAM: Dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; KEGG: nmu:Nmul_A2063 dihydroneopterin aldolase; SMART: Dihydroneopterin aldolase
YP_004293524.1	KEGG: nmu:Nmul_A2062 hypothetical protein; TIGRFAM: Glycerol-3-phosphate acyltransferase, bacteria; PFAM: Glycerol-3-phosphate acyltransferase, bacteria
YP_004293525.1	TIGRFAM: Peptidase M22, glycoprotease, subgroup; Peptidase M22, O-sialoglycoprotein peptidase; KEGG: nmu:Nmul_A2061 putative DNA-binding/iron metalloprotein/AP endonuclease; PFAM: Peptidase M22, glycoprotease
YP_004293527.1	KEGG: neu:NE1809 beta subunit of citrate lyase; PFAM: Aldehyde-lyase domain
YP_004293528.1	PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; TIGRFAM: Succinyl-CoA synthetase, beta subunit; HAMAP: Succinyl-CoA synthetase, beta subunit; KEGG: neu:NE1810 malate--CoA ligase subunit beta
YP_004293529.1	SMART: CoA-binding; TIGRFAM: Succinyl-CoA ligase, alpha subunit; KEGG: neu:NE1811 succinyl-CoA synthetase subunit alpha; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase
YP_004293530.1	PFAM: Haemerythrin/HHE cation-binding motif; KEGG: mei:Msip34_2571 hemerythrin HHE cation binding domain protein
YP_004293531.1	PFAM: Transposase IS200-like; KEGG: pca:Pcar_1473 transposase, putative
YP_004293532.1	KEGG: net:Neut_1503 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0114, bacteria; PFAM: Uncharacterised protein family UPF0114
YP_004293533.1	KEGG: rsh:Rsph17029_4185 Na-Ca exchanger/integrin-beta4; PFAM: Na-Ca exchanger/integrin-beta4; Haemolysin-type calcium-binding repeat; SMART: Na-Ca exchanger/integrin-beta4
YP_004293534.1	KEGG: nmu:Nmul_A0015 CinA-like; TIGRFAM: CinA, C-terminal; PFAM: CinA, C-terminal
YP_004293535.1	KEGG: nmu:Nmul_A2092 hypothetical protein
YP_004293536.1	PFAM: Protein of unknown function DUF2141; KEGG: hne:HNE_1585 hypothetical protein
YP_004293537.1	PFAM: DNA methylase, adenine-specific; N6 adenine-specific DNA methyltransferase, N12 class, N-terminal; KEGG: slt:Slit_2437 N-6 DNA methylase
YP_004293538.1	PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: ava:Ava_3499 restriction modification system DNA specificity subunit
YP_004293539.1	PFAM: PilT protein, N-terminal; KEGG: bts:Btus_3192 PilT protein domain protein
YP_004293540.1	KEGG: gur:Gura_0714 prevent-host-death family protein; TIGRFAM: Prevent-host-death protein; PFAM: Prevent-host-death protein
YP_004293542.1	KEGG: cag:Cagg_2602 excinuclease ABC C subunit domain protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal
YP_004293543.1	TIGRFAM: Restriction endonuclease, type I, EcoRI, R subunit; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Protein of unknown function DUF3387; KEGG: slt:Slit_2435 type I site-specific deoxyribonuclease, HsdR family; SMART: DEAD-like helicase, N-terminal
YP_004293544.1	KEGG: net:Neut_2249 hypothetical protein
YP_004293545.1	TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; KEGG: nmu:Nmul_A0045 B12-dependent methionine synthase; PFAM: Homocysteine S-methyltransferase; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12-dependent methionine synthase, activation domain; Pterin-binding
YP_004293546.1	KEGG: nmu:Nmul_A0029 hypothetical protein
YP_004293547.1	KEGG: neu:NE0599 hypothetical protein; HAMAP: Uncharacterised protein family UPF0289; PFAM: Uncharacterised protein family UPF0289
YP_004293548.1	TIGRFAM: Dephospho-CoA kinase; KEGG: neu:NE0598 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase
YP_004293549.1	KEGG: net:Neut_1044 prepilin peptidase; PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV
YP_004293550.1	PFAM: Type II secretion system F domain; KEGG: neu:NE0596 type II secretion system protein
YP_004293551.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: nmu:Nmul_A2685 NAD-dependent epimerase/dehydratase
YP_004293552.1	KEGG: nmu:Nmul_A2686 CDP-6-deoxy-delta-3,4-glucoseen reductase; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase, FAD-binding domain; Ferredoxin
YP_004293553.1	PFAM: HemY, N-terminal; KEGG: net:Neut_1040 HemY domain-containing protein
YP_004293554.1	PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; KEGG: nmu:Nmul_A2689 uroporphyrinogen-III synthase
YP_004293555.1	KEGG: nmu:Nmul_A2690 porphobilinogen deaminase; TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; PFAM: Porphobilinogen deaminase, N-terminal; Porphobilinogen deaminase, C-terminal domain
YP_004293556.1	KEGG: neu:NE0589 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase
YP_004293557.1	PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: nmu:Nmul_A2736 peptidase M16-like
YP_004293558.1	TIGRFAM: RNA methyltransferase, RsmD; KEGG: nmu:Nmul_A2735 hypothetical protein; PFAM: RNA methyltransferase, RsmD
YP_004293559.1	TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; KEGG: nmu:Nmul_A2734 phosphopantetheine adenylyltransferase; PFAM: Cytidylyltransferase
YP_004293560.1	KEGG: tgr:Tgr7_0299 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_004293561.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: app:CAP2UW1_1706 putative signal transduction protein
YP_004293562.1	KEGG: net:Neut_2126 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; Metal-dependent hydrolase HDOD; SMART: Diguanylate phosphodiesterase, EAL domain
YP_004293563.1	TIGRFAM: Cyanophycin synthetase; KEGG: app:CAP2UW1_3887 cyanophycin synthetase; PFAM: Mur ligase, central; Mur ligase, C-terminal; Carbamoyl-phosphate synthetase, large subunit, ATP-binding
YP_004293564.1	TIGRFAM: Cyanophycin synthetase; KEGG: nmu:Nmul_A2251 cyanophycin synthetase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Mur ligase, central
YP_004293565.1	PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; KEGG: nmu:Nmul_A2132 hypothetical protein
YP_004293566.1	PFAM: Carbohydrate/purine kinase; KEGG: mfa:Mfla_2609 PfkB
YP_004293567.1	TIGRFAM: Sucrose-phosphate synthase, glycosyltransferase domain; Sucrose phosphate synthase, sucrose phosphatase-like domain; HAD-superfamily hydrolase, subfamily IIB; KEGG: mei:Msip34_2763 sucrose-phosphate synthase; PFAM: Sucrose-phosphate synthase; Glycosyl transferase, group 1; Sucrose synthase
YP_004293568.1	KEGG: mei:Msip34_2764 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic domain
YP_004293569.1	TIGRFAM: Lumazine-binding protein; KEGG: nmu:Nmul_A0009 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein
YP_004293570.1	KEGG: nmu:Nmul_A0010 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA
YP_004293571.1	KEGG: neu:NE2557 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_004293572.1	KEGG: nmu:Nmul_A0012 NusB antitermination factor; TIGRFAM: NusB antitermination factor; PFAM: NusB/RsmB/TIM44
YP_004293573.1	TIGRFAM: Thiamine-monophosphate kinase; KEGG: nmu:Nmul_A0013 thiamine-monophosphate kinase; PFAM: AIR synthase-related protein
YP_004293574.1	PFAM: Phosphatidylglycerophosphatase A; KEGG: net:Neut_2520 phosphatidylglycerophosphatase A
YP_004293575.1	KEGG: kko:Kkor_1927 anion transporter; TIGRFAM: Sodium/sulphate symporter; PFAM: Sodium/sulphate symporter
YP_004293576.1	KEGG: nmu:Nmul_A1630 hypothetical protein
YP_004293577.1	PFAM: Protein of unknown function DUF1486; KEGG: vcn:VOLCADRAFT_106361 hypothetical protein
YP_004293578.1	PFAM: Uncharacterised protein family UPF0246; KEGG: maq:Maqu_2499 hypothetical protein
YP_004293579.1	KEGG: neu:NE0583 hypothetical protein
YP_004293580.1	KEGG: neu:NE0458 hypothetical protein
YP_004293581.1	KEGG: neu:NE0459 hypothetical protein; TIGRFAM: Flagellar biosynthesis protein FliR; PFAM: Type III secretion system inner membrane R protein
YP_004293582.1	KEGG: net:Neut_2060 flagellar biosynthetic protein FliQ; TIGRFAM: Flagellar biosynthesis protein FliQ; PFAM: Bacterial export protein FliQ, family 3
YP_004293583.1	KEGG: net:Neut_2059 flagellar biosynthesis protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein
YP_004293584.1	KEGG: net:Neut_2058 flagellar biosynthesis protein, FliO; TIGRFAM: Flagellar biosynthesis protein, FliO; PFAM: Flagellar biosynthesis protein, FliO
YP_004293585.1	KEGG: meh:M301_1010 flagellar motor switch protein FliN; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA)
YP_004293586.1	KEGG: bpy:Bphyt_3777 flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA)
YP_004293587.1	PFAM: Flagellar basal body-associated protein FliL; KEGG: neu:NE0465 flagellar basal body-associated protein FliL
YP_004293588.1	PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: gca:Galf_1064 flagellar hook-length control protein-like, C-terminal domain
YP_004293589.1	KEGG: neu:NE2087 flagellar FliJ protein; TIGRFAM: Flagellar export FliJ; PFAM: Flagellar export FliJ
YP_004293590.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Flagellar export ATPase, FliI, clade 1; ATPase, type III secretion system, FliI/YscN; KEGG: neu:NE2086 flagellar ATP synthase; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain
YP_004293591.1	PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: neu:NE2085 flagellar assembly protein FliH
YP_004293592.1	KEGG: net:Neut_0744 flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG, C-terminal
YP_004293593.1	KEGG: net:Neut_0745 flagellar M-ring protein FliF; TIGRFAM: Flagellar FliF M-ring protein; PFAM: Secretory protein YscJ/FliF; Flagellar M-ring C-terminal
YP_004293594.1	KEGG: neu:NE2082 putative two-component sensor; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS
YP_004293595.1	KEGG: neu:NE2081 sigma-54 dependent response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core
YP_004293596.1	KEGG: neu:NE2080 flagellar hook-basal body protein FliE; TIGRFAM: Flagellar hook-basal body complex protein FliE; PFAM: Flagellar hook-basal body complex protein FliE
YP_004293597.1	KEGG: gca:Galf_2156 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004293598.1	KEGG: reh:H16_A1991 hypothetical protein
YP_004293599.1	KEGG: amr:AM1_6172 IS5 family transposase
YP_004293600.1	PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase
YP_004293601.1	KEGG: der:Dere_GG10426 GG10426 gene product from transcript GG10426-RA
YP_004293602.1	PFAM: Spermine synthase; KEGG: slt:Slit_2028 spermine synthase
YP_004293603.1	PFAM: MgtC/SapB transporter; KEGG: neu:NE0009 MgtC family membrane protein
YP_004293604.1	KEGG: net:Neut_0131 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: Bacterial RecJ exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1
YP_004293605.1	PFAM: Transporter-associated domain; Cystathionine beta-synthase, core; KEGG: net:Neut_1786 CBS domain-containing protein
YP_004293606.1	manually curated; TIGRFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; KEGG: neu:NE2333 hypothetical protein; PFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted
YP_004293607.1	PFAM: PhoH-like protein; KEGG: nmu:Nmul_A2696 PhoH-like protein
YP_004293608.1	KEGG: nmu:Nmul_A2692 (dimethylallyl)adenosine tRNA methylthiotransferase; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; manually curated; TIGRFAM: tRNA-i(6)A37 modification enzyme MiaB; Methylthiotransferase; SMART: Elongator protein 3/MiaB/NifB; HAMAP: tRNA-i(6)A37 modification enzyme MiaB
YP_004293609.1	KEGG: rfr:Rfer_3366 hypothetical protein
YP_004293610.1	TIGRFAM: Thiolase; KEGG: neu:NE2262 beta-ketothiolase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal
YP_004293611.1	PFAM: ATPase, F0 complex, subunit I; KEGG: nmu:Nmul_A0303 ATP synthase protein I
YP_004293612.1	KEGG: net:Neut_0271 F0F1 ATP synthase subunit A; TIGRFAM: ATPase, F0 complex, subunit A; PFAM: ATPase, F0 complex, subunit A
YP_004293613.1	KEGG: neu:NE0201 F0F1 ATP synthase subunit C; TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; PFAM: ATPase, F0/V0 complex, subunit C
YP_004293614.1	KEGG: net:Neut_0273 F0F1 ATP synthase subunit B; TIGRFAM: ATPase, F0 complex, subunit B, bacterial; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast
YP_004293615.1	KEGG: nmu:Nmul_A0307 ATP synthase F1, delta subunit; TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; PFAM: ATPase, F1 complex, OSCP/delta subunit
YP_004293616.1	KEGG: nmu:Nmul_A0308 F0F1 ATP synthase subunit alpha; TIGRFAM: ATPase, F1 complex, alpha subunit; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal
YP_004293617.1	KEGG: net:Neut_0276 F0F1 ATP synthase subunit gamma; TIGRFAM: ATPase, F1 complex, gamma subunit; PFAM: ATPase, F1 complex, gamma subunit
YP_004293618.1	TIGRFAM: ATPase, F1 complex, beta subunit; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; KEGG: nmu:Nmul_A0310 F0F1 ATP synthase subunit beta; SMART: ATPase, AAA+ type, core
YP_004293619.1	KEGG: neu:NE0207 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; ATPase, F1 complex, delta/epsilon subunit, C-terminal
YP_004293620.1	KEGG: nmu:Nmul_A0312 UDP-N-acetylglucosamine pyrophosphorylase; manually curated; TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Bacterial transferase hexapeptide repeat; HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase
YP_004293621.1	TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; KEGG: nmu:Nmul_A0313 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: Sugar isomerase (SIS); Glutamine amidotransferase, class-II
YP_004293622.1	KEGG: nmu:Nmul_A2722 hypothetical protein; TIGRFAM: Protein of unknown function DUF28; PFAM: Protein of unknown function DUF28
YP_004293623.1	KEGG: slt:Slit_0512 crossover junction endodeoxyribonuclease RuvC; manually curated; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; HAMAP: Crossover junction endodeoxyribonuclease RuvC
YP_004293624.1	TIGRFAM: Bacterial DNA recombination protein RuvA; HAMAP: Bacterial DNA recombination protein RuvA; KEGG: nmu:Nmul_A2720 Holliday junction DNA helicase RuvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal
YP_004293625.1	TIGRFAM: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, N-terminal; DNA helicase, Holliday junction RuvB type, C-terminal; KEGG: nmu:Nmul_A2719 Holliday junction DNA helicase RuvB; SMART: ATPase, AAA+ type, core
YP_004293626.1	KEGG: ure:UREG_02430 hypothetical protein
YP_004293627.1	PFAM: Inhibitor of apoptosis-promoting Bax1-related; KEGG: net:Neut_1715 hypothetical protein
YP_004293628.1	KEGG: hna:Hneap_0467 hypothetical protein
YP_004293629.1	KEGG: net:Neut_2395 cytochrome c oxidase, subunit II; TIGRFAM: Cytochrome c oxidase, subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal; Cytochrome C oxidase subunit II, transmembrane domain
YP_004293630.1	KEGG: neu:NE1016 cytochrome c oxidase, subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I
YP_004293632.1	PFAM: Cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: nmu:Nmul_A0185 cytochrome c oxidase assembly protein
YP_004293633.1	KEGG: neu:NE1014 putative transmembrane protein
YP_004293634.1	KEGG: nmu:Nmul_A0187 cytochrome c oxidase, subunit III; PFAM: Cytochrome c oxidase, subunit III
YP_004293635.1	PFAM: Surfeit locus 1; KEGG: neu:NE1012 SURF1 family protein
YP_004293636.1	KEGG: nmu:Nmul_A0190 putative transmembrane protein
YP_004293637.1	KEGG: net:Neut_2389 protoheme IX farnesyltransferase; TIGRFAM: Protohaem IX farnesyltransferase; PFAM: UbiA prenyltransferase
YP_004293638.1	KEGG: nmu:Nmul_A0193 D-lactate dehydrogenase (cytochrome); PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal
YP_004293639.1	PFAM: Transport-associated; KEGG: net:Neut_2387 transport-associated
YP_004293640.1	KEGG: neu:NE1006 CheW-like domain-containing protein; PFAM: CheW-like protein; SMART: CheW-like protein
YP_004293641.1	TIGRFAM: Acetylglutamate kinase; KEGG: neu:NE1005 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase
YP_004293642.1	KEGG: nmu:Nmul_A0673 RNA methyltransferase TrmH, group 1; TIGRFAM: RNA methyltransferase TrmH, group 1; PFAM: tRNA/rRNA methyltransferase, SpoU
YP_004293644.1	PFAM: Cytochrome c, class I; KEGG: nhl:Nhal_1555 nitric-oxide reductase
YP_004293645.1	KEGG: nhl:Nhal_1556 nitric-oxide reductase; PFAM: Cytochrome c oxidase, subunit I
YP_004293646.1	PFAM: ATPase, AAA-5; CbbQ/NirQ/NorQ C-terminal; KEGG: nhl:Nhal_1557 ATPase associated with various cellular activities AAA_5
YP_004293647.1	KEGG: nhl:Nhal_1558 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A
YP_004293648.1	PFAM: DNA methylase N-4/N-6; KEGG: alv:Alvin_1538 DNA methylase N-4/N-6 domain protein
YP_004293649.1	PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: mca:MCA0551 hypothetical protein
YP_004293650.1	TIGRFAM: Anthranilate synthase component I, PabB-like; KEGG: nmu:Nmul_A2369 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal
YP_004293651.1	TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: neu:NE2149 phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase-like hydrolase
YP_004293652.1	TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: net:Neut_2096 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase
YP_004293653.1	PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein
YP_004293654.1	KEGG: sno:Snov_2115 hypothetical protein
YP_004293655.1	PFAM: ApaG domain; KEGG: neu:NE1573 ApaG
YP_004293656.1	PFAM: Tetrapyrrole methylase; KEGG: nmu:Nmul_A1067 uroporphyrin-III C/tetrapyrrole methyltransferase
YP_004293657.1	TIGRFAM: Glyoxalase I; KEGG: nmu:Nmul_A2625 glyoxalase I; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_004293658.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: neu:NE1426 rubredoxin:rubredoxin-type Fe(Cys)4 protein
YP_004293659.1	KEGG: nmu:Nmul_A2627 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1
YP_004293660.1	TIGRFAM: Thiamine monophosphate synthase; HAMAP: Thiamine monophosphate synthase; KEGG: neu:NE1424 thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase
YP_004293661.1	TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; KEGG: nmu:Nmul_A2629 glutamate-1-semialdehyde aminotransferase; PFAM: Aminotransferase class-III
YP_004293662.1	PFAM: Cytochrome c, class I; KEGG: neu:NE0273 cytochrome c, class IC:cytochrome c, class I
YP_004293663.1	PFAM: Sporulation-related domain; KEGG: net:Neut_0306 hypothetical protein
YP_004293664.1	TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: neu:NE0275 methionine aminopeptidase; PFAM: Peptidase M24, structural domain
YP_004293665.1	TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; KEGG: nmu:Nmul_A0066 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2
YP_004293666.1	TIGRFAM: Ham1-like protein; KEGG: nmu:Nmul_A0067 putative deoxyribonucleotide triphosphate pyrophosphatase; PFAM: Ham1-like protein
YP_004293667.1	KEGG: ppr:PBPRB1378 hypothetical protein
YP_004293668.1	KEGG: lch:Lcho_2325 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial
YP_004293669.1	KEGG: shi:Shel_22480 hypothetical protein
YP_004293670.1	KEGG: rrs:RoseRS_3426 hypothetical protein
YP_004293671.1	KEGG: nwa:Nwat_1966 hypothetical protein
YP_004293672.1	TIGRFAM: S-formylglutathione hydrolase; KEGG: net:Neut_1386 carboxylesterase; PFAM: Putative esterase
YP_004293673.1	KEGG: bav:BAV3289 glutathione-dependent formaldehyde dehydrogenase; TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal
YP_004293674.1	PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: net:Neut_0914 protein tyrosine phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight
YP_004293675.1	PFAM: Serine/threonine-protein kinase-like domain; KEGG: mgm:Mmc1_1921 serine/threonine protein kinase
YP_004293676.1	KEGG: bid:Bind_2756 galactose oxidase; PFAM: Domain of unknown function DUF1929; Glyoxal oxidase, N-terminal
YP_004293677.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: slt:Slit_1376 putative signal transduction protein
YP_004293678.1	KEGG: nmu:Nmul_A2562 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase
YP_004293679.1	TIGRFAM: Anthranilate phosphoribosyl transferase; KEGG: nmu:Nmul_A2563 anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal
YP_004293680.1	TIGRFAM: Anthranilate synthase, glutamine amidotransferase domain; KEGG: slt:Slit_0277 glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I, C-terminal
YP_004293681.1	KEGG: nmu:Nmul_A1951 30S ribosomal protein S6; TIGRFAM: Ribosomal protein S6; PFAM: Ribosomal protein S6
YP_004293682.1	KEGG: nmu:Nmul_A1950 primosomal replication protein N; manually curated; PFAM: Primosome PriB/single-strand DNA-binding
YP_004293683.1	KEGG: nmu:Nmul_A1949 30S ribosomal protein S18; TIGRFAM: Ribosomal protein S18; PFAM: Ribosomal protein S18
YP_004293684.1	KEGG: nmu:Nmul_A1948 ribosomal protein L9; TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; PFAM: Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal
YP_004293685.1	TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: nmu:Nmul_A1947 replicative DNA helicase; SMART: ATPase, AAA+ type, core
YP_004293686.1	KEGG: nmu:Nmul_A0578 hypothetical protein
YP_004293687.1	KEGG: gca:Galf_0920 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain
YP_004293688.1	KEGG: syp:SYNPCC7002_A2132 DNA methyltransferase
YP_004293689.1	KEGG: reu:Reut_A1455 glutathione S-transferase; PFAM: Glutathione S-transferase, C-terminal
YP_004293690.1	KEGG: neu:NE0101 glycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_004293691.1	PFAM: Transposase IS3/IS911family; KEGG: net:Neut_1813 transposase IS3/IS911 family protein
YP_004293692.1	KEGG: btl:BALH_1430 hypothetical protein
YP_004293693.1	KEGG: scl:sce8365 hypothetical protein
YP_004293694.1	PFAM: Transposase IS3/IS911family; KEGG: bvi:Bcep1808_7228 transposase IS3/IS911 family protein
YP_004293695.1	KEGG: tra:Trad_0294 Stf0 sulfotransferase
YP_004293696.1	TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: scl:sce2384 putative hydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004293698.1	KEGG: neu:NE1583 hypothetical protein; TIGRFAM: Prevent-host-death protein; PFAM: Prevent-host-death protein
YP_004293699.1	KEGG: neu:NE1584 hypothetical protein; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system
YP_004293700.1	PFAM: Transposase IS200-like; KEGG: app:CAP2UW1_3088 protein of unknown function DUF1568
YP_004293701.1	PFAM: Integrase, catalytic core; Resolvase, helix-turn-helix domain; KEGG: pst:PSPTO_B0040 ISPsy4, transposase
YP_004293702.1	KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004293703.1	KEGG: pph:Ppha_2372 addiction module component, TIGR02574 family; TIGRFAM: Addiction module component, CHP02574; PFAM: Addiction module component, CHP02574
YP_004293704.1	PFAM: Transposase IS200-like; KEGG: app:CAP2UW1_3088 protein of unknown function DUF1568
YP_004293705.1	KEGG: rsh:Rsph17029_2336 hypothetical protein
YP_004293706.1	TIGRFAM: Transcription-repair coupling factor; PFAM: Transcription-repair-coupling factor domain; Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: nmu:Nmul_A0639 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004293707.1	KEGG: dbr:Deba_0069 hypothetical protein
YP_004293708.1	KEGG: tgr:Tgr7_0639 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1
YP_004293709.1	PFAM: Secretion protein HlyD; KEGG: llo:LLO_0413 coiled-coil protein
YP_004293710.1	KEGG: dia:Dtpsy_0734 outer membrane protein-like protein
YP_004293711.1	PFAM: Glycosyl transferase, family 2; KEGG: tai:Taci_0167 glycosyl transferase family 2
YP_004293712.1	KEGG: dia:Dtpsy_0736 hypothetical protein
YP_004293713.1	KEGG: net:Neut_1958 hypothetical protein
YP_004293714.1	PFAM: Enterobacterial TraT complement resistance; KEGG: net:Neut_1959 TraT complement resistance family protein
YP_004293715.1	KEGG: net:Neut_1960 hypothetical protein
YP_004293716.1	KEGG: eba:ebA2659 ExsB protein; TIGRFAM: Queuosine synthesis; PFAM: Queuosine synthesis
YP_004293717.1	PFAM: Radical SAM; KEGG: nmu:Nmul_A2711 radical SAM family protein
YP_004293718.1	TIGRFAM: Tol-Pal system, YbgF; KEGG: neu:NE0220 TPR repeat-containing protein
YP_004293719.1	KEGG: neu:NE0219 outer membrane protein; TIGRFAM: Peptidoglycan-associated lipoprotein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal
YP_004293720.1	KEGG: nmu:Nmul_A2714 translocation protein TolB; TIGRFAM: Tol-Pal system beta propeller repeat-containing protein, TolB; PFAM: TolB, N-terminal; WD40-like Beta Propeller
YP_004293721.1	KEGG: nmu:Nmul_A2715 TonB-like; TIGRFAM: Tol-Pal system, TolA; PFAM: Tol-Pal system, TolA
YP_004293722.1	KEGG: neu:NE0216 biopolymer transport protein ExbD/TolR; TIGRFAM: Biopolymer transport, TolR; PFAM: Biopolymer transport protein ExbD/TolR
YP_004293723.1	KEGG: net:Neut_0286 MotA/TolQ/ExbB proton channel; TIGRFAM: Tol-Pal system, TolQ; PFAM: MotA/TolQ/ExbB proton channel
YP_004293724.1	KEGG: neu:NE0214 4-hydroxybenzoyl-CoA thioesterase family protein; TIGRFAM: Tol-Pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily
YP_004293725.1	TIGRFAM: Cysteine synthase K/M; Cysteine synthase B; KEGG: nmu:Nmul_A2221 cysteine synthase B; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004293726.1	TIGRFAM: Competence protein ComEA, helix-hairpin-helix domain; PFAM: Helix-hairpin-helix motif; KEGG: nmu:Nmul_A2222 competence protein ComEA helix-hairpin-helix region; SMART: Helix-hairpin-helix DNA-binding motif, class 1
YP_004293727.1	PFAM: Biopterin transport-related protein BT1; KEGG: nmu:Nmul_A0956 hypothetical protein
YP_004293728.1	PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; KEGG: neu:NE1508 HtrA-like serine protease signal peptide protein; SMART: PDZ/DHR/GLGF
YP_004293729.1	KEGG: neu:NE1509 hypothetical protein; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3
YP_004293730.1	KEGG: nmu:Nmul_A2446 MltA; PFAM: Lytic transglycosylase MltA; 3D; SMART: Lytic transglycosylase MltA
YP_004293731.1	PFAM: Disulphide bond isomerase, DsbC/G, N-terminal; KEGG: neu:NE1511 hypothetical protein
YP_004293732.1	KEGG: nmu:Nmul_A2444 ubiquinone biosynthesis hydroxylase family protein; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Monooxygenase, FAD-binding
YP_004293733.1	TIGRFAM: Cysteine synthase K/M; Cysteine synthase A; KEGG: mmb:Mmol_0796 cysteine synthase A; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004293734.1	KEGG: nmu:Nmul_A2073 serine O-acetyltransferase
YP_004293735.1	PFAM: Domain of unknown function DUF336; KEGG: nmu:Nmul_A0738 hypothetical protein
YP_004293736.1	KEGG: amr:AM1_6172 IS5 family transposase
YP_004293737.1	PFAM: Protein of unknown function DUF2165, transmembrane; KEGG: hch:HCH_05440 small integral membrane protein
YP_004293738.1	KEGG: nmu:Nmul_A0990 import inner membrane translocase, subunit Tim44; PFAM: Membrane transporter, Tim44-related/Ribosomal protein L45; SMART: Membrane transporter, Tim44-related/Ribosomal protein L45
YP_004293739.1	manually curated; KEGG: nmu:Nmul_A1395 hypothetical protein
YP_004293740.1	KEGG: ppw:PputW619_0012 hypothetical protein
YP_004293741.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nmu:Nmul_A1145 transcriptional regulator CysB-like protein
YP_004293742.1	KEGG: gca:Galf_1982 hypothetical protein
YP_004293743.1	KEGG: gca:Galf_1981 nitrite and sulphite reductase 4Fe-4S region; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like
YP_004293744.1	PFAM: Uncharacterised conserved protein UCP030820; KEGG: hse:Hsero_3100 hypothetical protein
YP_004293745.1	TIGRFAM: Adenylylsulphate reductase, thioredoxin dependent; Phosphoadenosine phosphosulphate reductase CysH-type; KEGG: slt:Slit_1033 adenylylsulfate reductase, thioredoxin dependent; PFAM: Phosphoadenosine phosphosulphate reductase
YP_004293746.1	PFAM: Signal transduction response regulator, receiver domain; KEGG: slt:Slit_1160 multi-sensor hybrid histidine kinase; SMART: Signal transduction response regulator, receiver domain
YP_004293747.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nmu:Nmul_A1150 hypothetical protein
YP_004293748.1	KEGG: rcu:RCOM_1880270 two-component sensor protein histidine protein kinase, putative; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: Signal transduction histidine kinase, phosphotransfer (Hpt) domain
YP_004293749.1	KEGG: nmu:Nmul_A1151 NAD(P)(+) transhydrogenase (AB-specific); PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal
YP_004293750.1	KEGG: nmu:Nmul_A1152 transmembrane NAD(P) transhydrogenase (alpha subunit part 2)
YP_004293751.1	KEGG: neu:NE0861 NAD(P) transhydrogenase beta subunit; PFAM: NAD(P) transhydrogenase, beta subunit
YP_004293753.1	KEGG: net:Neut_1199 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold-4; SMART: Diguanylate phosphodiesterase, EAL domain
YP_004293754.1	PFAM: Bisphosphoglycerate-independent phosphoglycerate mutase; KEGG: nmu:Nmul_A2416 hypothetical protein
YP_004293755.1	TIGRFAM: Isocitrate dehydrogenase NADP-dependent, prokaryotic; KEGG: nmu:Nmul_A2245 isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate/isopropylmalate dehydrogenase
YP_004293756.1	KEGG: net:Neut_2046 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein
YP_004293758.1	PFAM: Adaptor protein ClpS, core; KEGG: nmu:Nmul_A2247 ATP-dependent Clp protease adaptor protein ClpS
YP_004293759.1	TIGRFAM: ATP-dependent Clp protease ATP-binding subunit ClpA; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: nmu:Nmul_A2248 ATPase with chaperone activity; SMART: ATPase, AAA+ type, core
YP_004293760.1	KEGG: nmu:Nmul_A2108 heavy metal efflux pump CzcA; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein
YP_004293761.1	KEGG: nmu:Nmul_A2107 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004293762.1	PFAM: Outer membrane efflux protein; KEGG: nmu:Nmul_A2106 outer membrane efflux protein
YP_004293763.1	KEGG: nmu:Nmul_A2105 hypothetical protein
YP_004293764.1	TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: nmu:Nmul_A1068 maf protein; PFAM: Maf-like protein
YP_004293765.1	PFAM: Protein of unknown function DUF177; KEGG: net:Neut_0473 hypothetical protein
YP_004293766.1	KEGG: neu:NE1644 50S ribosomal protein L32; TIGRFAM: Ribosomal protein L32p; PFAM: Ribosomal protein L32p
YP_004293767.1	TIGRFAM: Phospholipid biosynthesis protein, PlsX-like; HAMAP: Phospholipid biosynthesis protein, PlsX-like; KEGG: nmu:Nmul_A1071 putative glycerol-3-phosphate acyltransferase PlsX; PFAM: Fatty acid synthesis PlsX protein
YP_004293768.1	TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: nmu:Nmul_A1072 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YP_004293769.1	KEGG: nmu:Nmul_A1073 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; manually curated; TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; SMART: Polyketide synthase, acyl transferase domain
YP_004293770.1	KEGG: nmu:Nmul_A1074 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; Mediator complex, subunit Med9
YP_004293771.1	KEGG: net:Neut_0467 acyl carrier protein; TIGRFAM: Acyl carrier protein (ACP); PFAM: Phosphopantetheine-binding
YP_004293772.1	SMART: Polyketide synthase, beta-ketoacyl synthase domain; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: neu:NE1650 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal
YP_004293773.1	KEGG: nmu:Nmul_A1077 aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family UPF0755; PFAM: Uncharacterised protein family UPF0755
YP_004293774.1	KEGG: nmu:Nmul_A1764 dolichyl-phosphate beta-D-mannosyltransferase; PFAM: Glycosyl transferase, family 2; GtrA-like protein
YP_004293775.1	PFAM: O-methyltransferase, family 2; KEGG: nhl:Nhal_1752 O-methyltransferase family 2
YP_004293776.1	PFAM: Polyketide cyclase/dehydrase; KEGG: nhl:Nhal_1751 hypothetical protein
YP_004293777.1	manually curated; TIGRFAM: Flagellin assembly, membrane protein MviN; KEGG: nmu:Nmul_A1036 integral membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN
YP_004293778.1	KEGG: ptm:GSPATT00024162001 hypothetical protein
YP_004293779.1	KEGG: pmy:Pmen_1553 hypothetical protein
YP_004293780.1	PFAM: Uncharacterised protein family UPF0276; KEGG: nhl:Nhal_2721 protein of unknown function DUF692
YP_004293781.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Metal-dependent hydrolase HDOD; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain; KEGG: tmz:Tmz1t_3851 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain
YP_004293782.1	KEGG: tmz:Tmz1t_3847 Hpt sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; HAMP linker domain
YP_004293783.1	KEGG: tmz:Tmz1t_3846 hypothetical protein
YP_004293784.1	KEGG: tbd:Tbd_1266 TonB-dependent iron complex outermembrane receptor protein; manually curated; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004293785.1	PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: neu:NE0376 ABC transporter permease/ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004293786.1	KEGG: noc:Noc_0536 pheromone shutdown protein; TIGRFAM: Pheromone shutdown, TraB; PFAM: Pheromone shutdown-related, TraB
YP_004293787.1	KEGG: sno:Snov_2952 hypothetical protein
YP_004293788.1	KEGG: neu:NE2056 hypothetical protein; manually curated; PFAM: YkuD domain
YP_004293789.1	KEGG: neu:NE1907 hypothetical protein
YP_004293790.1	PFAM: YkuD domain; KEGG: neu:NE1659 hypothetical protein
YP_004293791.1	PFAM: Porin, Gram-negative type; KEGG: nmu:Nmul_A2561 porin
YP_004293792.1	KEGG: neu:NE0369 hypothetical protein
YP_004293793.1	PFAM: Protein of unknown function DUF2806; KEGG: nmu:Nmul_A0795 hypothetical protein
YP_004293794.1	KEGG: net:Neut_2458 hydroxypyruvate reductase; PFAM: MOFRL domain
YP_004293795.1	KEGG: nmu:Nmul_A2229 excinuclease ABC, A subunit; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like
YP_004293796.1	PFAM: Major facilitator superfamily MFS-1; KEGG: net:Neut_2460 major facilitator transporter
YP_004293797.1	KEGG: nmu:Nmul_A2227 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding
YP_004293799.1	KEGG: app:CAP2UW1_1594 pyridine nucleotide-disulfide oxidoreductase family protein; TIGRFAM: Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
YP_004293800.1	PFAM: Peptidoglycan binding-like; KEGG: neu:NE2133 peptidoglycan binding domain-containing protein
YP_004293801.1	TIGRFAM: Hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Domain of unknown function DUF3463; Radical SAM; KEGG: nmu:Nmul_A2560 radical SAM family protein; SMART: Elongator protein 3/MiaB/NifB
YP_004293802.1	PFAM: Glycosyl transferase, family 2; KEGG: neu:NE0330 glycosyl transferase family protein
YP_004293803.1	KEGG: neu:NE0331 putative periplasmic transport protein; TIGRFAM: Hopanoid biosynthesis-associated membrane protein HpnM; PFAM: Toluene tolerance Ttg2
YP_004293804.1	TIGRFAM: Hopanoid biosynthesis associated RND transporter-like protein HpnN; KEGG: nmu:Nmul_A2558 hypothetical protein
YP_004293805.1	PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; KEGG: nmu:Nmul_A2620 Fmu (Sun) NOL1/Nop2p
YP_004293806.1	PFAM: Protein of unknown function DUF3108; KEGG: neu:NE0086 hypothetical protein
YP_004293807.1	TIGRFAM: Phosphoribosylglycinamide formyltransferase; KEGG: nmu:Nmul_A2618 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal
YP_004293808.1	TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; KEGG: nmu:Nmul_A2617 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein
YP_004293809.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: sde:Sde_0100 deacylase-like
YP_004293811.1	KEGG: mca:MCA0809 acetylornithine aminotransferase, putative; PFAM: Aminotransferase class-III
YP_004293812.1	PFAM: Uncharacterised protein family UPF0118; KEGG: neu:NE0089 hypothetical protein
YP_004293813.1	KEGG: nmu:Nmul_A2616 DnaA regulatory inactivator Hda; TIGRFAM: Chromosomal replication control, regulator Hda; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda)
YP_004293814.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: neu:NE0097 HAD family hydrolase
YP_004293815.1	TIGRFAM: Lysyl-tRNA synthetase, class II; KEGG: neu:NE2355 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type
YP_004293816.1	KEGG: sus:Acid_1755 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain
YP_004293817.1	KEGG: nde:NIDE3511 putative multicopper oxidase, type 2; PFAM: Multicopper oxidase, type 2
YP_004293818.1	PFAM: Copper chaperone SCO1/SenC; KEGG: pfo:Pfl01_2002 electron transport protein SCO1/SenC
YP_004293819.1	KEGG: lch:Lcho_3668 fibronectin type III domain-containing protein
YP_004293820.1	SMART: Diguanylate cyclase, predicted; HAMP linker domain; GAF; TIGRFAM: Diguanylate cyclase, predicted; KEGG: tau:Tola_1191 diguanylate cyclase with GAF sensor; PFAM: Diguanylate cyclase, predicted; HAMP linker domain; GAF
YP_004293821.1	PFAM: Phosphotransferase system, fructose subfamily IIA component; KEGG: mmb:Mmol_2160 PTS system fructose subfamily IIA component
YP_004293822.1	KEGG: nmu:Nmul_A0219 HPrNtr; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; PFAM: Phosphotransferase system, phosphocarrier HPr protein
YP_004293823.1	TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; KEGG: nmu:Nmul_A0220 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile domain
YP_004293824.1	TIGRFAM: Homoserine acetyltransferase; KEGG: nmu:Nmul_A0221 homoserine O-acetyltransferase; PFAM: Alpha/beta hydrolase fold-1
YP_004293825.1	KEGG: nmu:Nmul_A0222 methionine biosynthesis MetW; TIGRFAM: Methionine biosynthesis MetW; PFAM: Methionine biosynthesis MetW
YP_004293826.1	PFAM: Plasmid pRiA4b ORF-3-like; KEGG: kol:Kole_0088 plasmid pRiA4b ORF-3 family protein
YP_004293827.1	PFAM: Protein of unknown function DUF455; KEGG: nhl:Nhal_2779 protein of unknown function DUF455
YP_004293828.1	PFAM: Thioesterase superfamily; KEGG: nmu:Nmul_A0096 thioesterase superfamily protein
YP_004293829.1	PFAM: Sulfotransferase domain; KEGG: hoh:Hoch_5094 sulfotransferase
YP_004293831.1	KEGG: syf:Synpcc7942_0648 hypothetical protein
YP_004293832.1	TIGRFAM: 6-phosphogluconolactonase, DevB-type; KEGG: net:Neut_0430 6-phosphogluconolactonase
YP_004293833.1	PFAM: Haloacid dehalogenase-like hydrolase; KEGG: nmu:Nmul_A0426 haloacid dehalogenase-like hydrolase
YP_004293834.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: nmu:Nmul_A0427 NAD-dependent epimerase/dehydratase
YP_004293835.1	KEGG: net:Neut_0433 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_004293836.1	KEGG: net:Neut_0434 2-dehydro-3-deoxyglucarate aldolase; PFAM: Aldehyde-lyase domain
YP_004293837.1	KEGG: neu:NE1686 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase
YP_004293838.1	KEGG: nmu:Nmul_A0431 hypothetical protein
YP_004293839.1	KEGG: nmu:Nmul_A1173 methyltransferase FkbM; TIGRFAM: Methyltransferase FkbM; PFAM: Protein of unknown function Met10
YP_004293840.1	PFAM: Glycosyl transferase, family 2; KEGG: nmu:Nmul_A0432 glycosyl transferase family protein
YP_004293841.1	PFAM: O-antigen ligase-related; KEGG: nmu:Nmul_A0418 O-antigen polymerase
YP_004293842.1	PFAM: Transposase, IS4-like; KEGG: cyn:Cyan7425_5319 transposase IS4 family protein
YP_004293843.1	PFAM: Methyltransferase type 11; KEGG: gme:Gmet_2177 ubiquinone/menaquinone biosynthesis methylase-like protein
YP_004293844.1	PFAM: O-methyltransferase, family 3; KEGG: nmu:Nmul_A0939 O-methyltransferase family protein
YP_004293845.1	PFAM: Protein of unknown function DUF2024; KEGG: nmu:Nmul_A2677 hypothetical protein
YP_004293846.1	KEGG: neu:NE1679 hypothetical protein
YP_004293847.1	PFAM: Arsenate reductase-like; KEGG: neu:NE1678 putative arsenate reductase
YP_004293848.1	KEGG: nmu:Nmul_A0572 50S ribosomal protein L19; TIGRFAM: Ribosomal protein L19; PFAM: Ribosomal protein L19
YP_004293849.1	TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: nmu:Nmul_A0571 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase
YP_004293850.1	TIGRFAM: 16S rRNA processing protein RimM; HAMAP: 16S rRNA processing protein RimM; KEGG: nmu:Nmul_A0570 16S rRNA-processing protein RimM; PFAM: RimM protein; PRC-barrel
YP_004293851.1	KEGG: net:Neut_0445 30S ribosomal protein S16; TIGRFAM: Ribosomal protein S16; PFAM: Ribosomal protein S16
YP_004293852.1	KEGG: nmu:Nmul_A0339 hypothetical protein; manually curated; PFAM: Cysteine-rich domain; 4Fe-4S binding domain
YP_004293853.1	PFAM: Ubiquinone biosynthesis-like protein; KEGG: nmu:Nmul_A0341 putative ubiquinone biosynthesis protein
YP_004293854.1	PFAM: Protein of unknown function DUF179; KEGG: nmu:Nmul_A2478 hypothetical protein
YP_004293855.1	TIGRFAM: Resolvase, holliday junction-type, YqgF-like; PFAM: Resolvase, holliday junction-type, YqgF-like; KEGG: net:Neut_0449 Holliday junction resolvase-like protein; SMART: Resolvase, RNase H-like fold
YP_004293856.1	KEGG: net:Neut_0450 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; PFAM: Phosphoribosyltransferase
YP_004293857.1	TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; KEGG: nmu:Nmul_A2481 aspartate carbamoyltransferase catalytic subunit; PFAM: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
YP_004293858.1	KEGG: nmu:Nmul_A2482 dihydroorotase; TIGRFAM: Dihydroorotase; PFAM: Amidohydrolase 1
YP_004293859.1	KEGG: neu:NE1663 M3 family peptidase; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F
YP_004293860.1	PFAM: VacJ-like lipoprotein; KEGG: net:Neut_1536 VacJ family lipoprotein
YP_004293861.1	KEGG: nmu:Nmul_A0171 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
YP_004293862.1	KEGG: neu:NE0055 intracellular septation protein A; TIGRFAM: Intracellular septation protein A; PFAM: Intracellular septation protein A
YP_004293863.1	PFAM: YCII-related; KEGG: nmu:Nmul_A2112 YCII-related
YP_004293864.1	PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: nmu:Nmul_A2114 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_004293865.1	TIGRFAM: Alanine racemase; KEGG: nmu:Nmul_A2115 alanine racemase; PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal
YP_004293866.1	KEGG: nmu:Nmul_A2116 lysophospholipid transporter LplT; manually curated; PFAM: Major facilitator superfamily MFS-1
YP_004293867.1	KEGG: neu:NE1398 putative DNA polymerase-related protein; TIGRFAM: Phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like
YP_004293868.1	KEGG: neu:NE1399 GCN5-related N-acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain
YP_004293869.1	KEGG: nmu:Nmul_A2123 peptidase M22, glycoprotease; TIGRFAM: Conserved hypothetical protein CHP03725, YeaZ; PFAM: Peptidase M22, glycoprotease
YP_004293870.1	manually curated; TIGRFAM: 2',5' RNA ligase; KEGG: nmu:Nmul_A2125 2',5' RNA ligase; PFAM: Phosphoesterase, HXTX
YP_004293871.1	TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; KEGG: nmu:Nmul_A2126 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core
YP_004293872.1	PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; manually curated; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: nmu:Nmul_A2127 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase
YP_004293873.1	KEGG: slt:Slit_1503 hypothetical protein
YP_004293874.1	PFAM: Peptidase S49; KEGG: neu:NE1024 U7 family peptidase
YP_004293875.1	KEGG: neu:NE1553 transposase
YP_004293876.1	PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase
YP_004293877.1	KEGG: nha:Nham_4014 ISSpo6, transposase orf A
YP_004293878.1	TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: meh:M301_1164 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase
YP_004293879.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: pol:Bpro_4022 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_004293880.1	TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal; PFAM: tRNA(Ile)-lysidine/2-thiocytidine synthase; Lysidine-tRNA(Ile) synthetase, substrate-binding domain; Lysidine-tRNA(Ile) synthetase, C-terminal; KEGG: nmu:Nmul_A1809 hypothetical protein; SMART: Lysidine-tRNA(Ile) synthetase, C-terminal
YP_004293881.1	TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; KEGG: neu:NE1021 acetyl-CoA carboxylase carboxyltransferase subunit alpha; PFAM: Acetyl-CoA carboxylase, alpha subunit
YP_004293882.1	TIGRFAM: Methionine sulphoxide reductase B; KEGG: app:CAP2UW1_3719 methionine-R-sulfoxide reductase; PFAM: Methionine sulphoxide reductase B
YP_004293883.1	TIGRFAM: Peptide methionine sulphoxide reductase MsrA; KEGG: nhl:Nhal_3184 peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA
YP_004293884.1	KEGG: nmu:Nmul_A1143 cupin region; PFAM: Cupin, JmjC-type; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase
YP_004293885.1	PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase
YP_004293886.1	SMART: Peptidase, metallopeptidase; KEGG: psb:Psyr_3983 serralysin
YP_004293887.1	KEGG: pst:PSPTO_3193 metalloprotease, putative; PFAM: Peptidase M10, metallopeptidase; SMART: Peptidase, metallopeptidase
YP_004293888.1	PFAM: (Uracil-5)-methyltransferase; KEGG: neu:NE1857 SAM-binding motif-containing protein
YP_004293889.1	TIGRFAM: Methionine sulphoxide reductase B; KEGG: bcy:Bcer98_3954 bifunctional methionine sulfoxide reductase A/B protein; PFAM: Methionine sulphoxide reductase B
YP_004293890.1	KEGG: neu:NE0601 Na+/H+ antiporter NhaC; TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like
YP_004293891.1	KEGG: mru:mru_0760 hypothetical protein
YP_004293892.1	KEGG: nmu:Nmul_A2766 ammonia monooxygenase/methane monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C
YP_004293893.1	KEGG: nmu:Nmul_A2765 ammonia monooxygenase; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A
YP_004293894.1	KEGG: nmu:Nmul_A2764 monooxygenase subunit B protein; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B
YP_004293895.1	KEGG: nmu:Nmul_A1398 hypothetical protein
YP_004293896.1	KEGG: nmu:Nmul_A2762 hypothetical protein
YP_004293897.1	PFAM: Copper resistance protein CopC, core; KEGG: neu:NE2059 putative copper export proteins
YP_004293898.1	PFAM: Copper resistance D; Cytochrome c, class I; Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: nmu:Nmul_A2760 cytochrome c, class I
YP_004293899.1	PFAM: Heavy metal transport/detoxification protein; KEGG: pmu:PM1891 hypothetical protein
YP_004293900.1	KEGG: xcv:XCV1523 outer membrane lipoprotein
YP_004293901.1	KEGG: net:Neut_1915 sec-independent protein translocase, TatC subunit; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase
YP_004293902.1	KEGG: dar:Daro_3374 sec-independent protein translocase TatB; TIGRFAM: Twin-arginine translocation protein TatB; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106
YP_004293903.1	KEGG: neu:NE0639 twin arginine translocase protein A; TIGRFAM: Twin-arginine translocation protein TatA/E; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106
YP_004293904.1	KEGG: nmu:Nmul_A0811 histidine triad (HIT) protein
YP_004293905.1	KEGG: neu:NE0641 phosphoribosyl-ATP pyrophosphatase; TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like
YP_004293906.1	KEGG: nmu:Nmul_A0813 phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase
YP_004293907.1	TIGRFAM: Histidine biosynthesis, HisF; KEGG: nmu:Nmul_A0814 imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis
YP_004293908.1	TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA; KEGG: mfa:Mfla_0253 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: Histidine biosynthesis
YP_004293909.1	KEGG: nmu:Nmul_A0816 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; PFAM: Glutamine amidotransferase class-I, C-terminal
YP_004293910.1	KEGG: gca:Galf_0434 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase
YP_004293911.1	TIGRFAM: Histidinol-phosphate aminotransferase; KEGG: nmu:Nmul_A0818 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/classII
YP_004293912.1	PFAM: Protein of unknown function DUF185; KEGG: nmu:Nmul_A0337 hypothetical protein
YP_004293913.1	KEGG: nmu:Nmul_A0336 pteridine reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004293914.1	PFAM: Chorismate--pyruvate lyase; manually curated; HAMAP: Chorismate--pyruvate lyase; KEGG: nmu:Nmul_A2612 chorismate lyase
YP_004293915.1	TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; HAMAP: 4-hydroxybenzoate polyprenyl transferase; KEGG: neu:NE1838 4-hydroxybenzoate octaprenyltransferase; PFAM: UbiA prenyltransferase
YP_004293916.1	KEGG: nmu:Nmul_A2610 carboxylyase-like protein; TIGRFAM: Carboxylyase-related; PFAM: Carboxylyase-related
YP_004293917.1	PFAM: Protein of unknown function DUF486; KEGG: net:Neut_0429 hypothetical protein
YP_004293918.1	PFAM: Organic solvent tolerance protein, C-terminal; Organic solvent tolerance-like, N-terminal; KEGG: net:Neut_1216 organic solvent tolerance protein
YP_004293919.1	PFAM: SurA N-terminal; Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: nmu:Nmul_A0520 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_004293920.1	TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; KEGG: nmu:Nmul_A0519 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA
YP_004293921.1	TIGRFAM: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine methylase transferase; KEGG: nmu:Nmul_A0518 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase, N-terminal
YP_004293922.1	KEGG: lpf:lpl0095 hypothetical protein
YP_004293923.1	KEGG: hse:Hsero_2417 subtilisin-like serine protease; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin
YP_004293924.1	KEGG: xop:PXO_00213 hypothetical protein
YP_004293925.1	KEGG: hse:Hsero_2419 RNA polymerase sigma-E factor protein; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004293926.1	KEGG: gpb:HDN1F_36050 hypothetical protein
YP_004293927.1	PFAM: Glycoside hydrolase, family 42, N-terminal; KEGG: nde:NIDE1370 hypothetical protein
YP_004293928.1	KEGG: saf:SULAZ_0652 nitrogen regulatory protein P-II
YP_004293929.1	manually curated
YP_004293930.1	KEGG: mar:MAE_06890 BNR repeat-containing glycosyl hydrolase
YP_004293931.1	TIGRFAM: PAS; PFAM: CHASE; ATPase-like, ATP-binding domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: hch:HCH_00809 signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; PAC motif
YP_004293932.1	KEGG: gca:Galf_2077 metal dependent phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; SMART: Metal-dependent phosphohydrolase, HD domain
YP_004293933.1	KEGG: rxy:Rxyl_3110 sulfatase; PFAM: Sulfatase
YP_004293934.1	KEGG: tpr:Tpau_2513 ABC drug efflux pump, inner membrane subunit, DrrB family
YP_004293935.1	PFAM: Protein of unknown function DUF839; WD40-like Beta Propeller; KEGG: sna:Snas_5802 hypothetical protein
YP_004293936.1	KEGG: fnu:FN1252 34 kDa membrane antigen precursor
YP_004293937.1	PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: neu:NE1900 hypothetical protein
YP_004293938.1	PFAM: ABC transporter-like; KEGG: neu:NE1899 ABC transporter ATPase; SMART: ATPase, AAA+ type, core
YP_004293939.1	KEGG: neu:NE1898 hypothetical protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004293940.1	PFAM: Peptidase M48; KEGG: nmu:Nmul_A2537 peptidase M48, Ste24p
YP_004293941.1	KEGG: nmu:Nmul_A2535 NAD+ synthetase; TIGRFAM: NAD synthase; PFAM: NAD/GMP synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004293942.1	PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; KEGG: net:Neut_2007 phosphomannomutase
YP_004293943.1	KEGG: nmu:Nmul_A1061 hypothetical protein
YP_004293944.1	TIGRFAM: Branched-chain amino acid aminotransferase I; KEGG: nmu:Nmul_A1060 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV
YP_004293945.1	KEGG: pfl:PFL_4147 putative lipoprotein
YP_004293946.1	KEGG: fno:Fnod_0931 hypothetical protein
YP_004293947.1	PFAM: Sulphate transporter; KEGG: tgr:Tgr7_1442 sulphate transporter
YP_004293948.1	PFAM: UspA; KEGG: app:CAP2UW1_1381 UspA domain protein
YP_004293949.1	KEGG: zin:ZICARI_039 putative cytochrome bo terminal oxidase subunit I/cytochrome bo terminal oxidase subunit III fusion protein
YP_004293950.1	KEGG: nde:NIDE1370 hypothetical protein
YP_004293951.1	manually curated; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; KEGG: nmu:Nmul_A0728 two component LuxR family transcriptional regulator; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal
YP_004293952.1	KEGG: nmu:Nmul_A0727 putative signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain
YP_004293953.1	KEGG: pub:SAR11_0063 type II secretion
YP_004293954.1	PFAM: Peroxiredoxin, OsmC-like protein; Peptidase S9, prolyl oligopeptidase, catalytic domain; KEGG: alv:Alvin_1830 OsmC family protein
YP_004293955.1	KEGG: slt:Slit_2540 RNA-binding S4 domain protein; PFAM: RNA-binding S4; SMART: RNA-binding S4
YP_004293956.1	PFAM: Class II aldolase/adducin, N-terminal; KEGG: neu:NE0048 class II aldolase/adducin domain protein
YP_004293957.1	TIGRFAM: Uncharacterised protein family HDIG; PFAM: Protein of unknown function DUF3391; Metal-dependent phosphohydrolase, HD subdomain; KEGG: slt:Slit_1975 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD domain
YP_004293958.1	KEGG: neu:NE1918 von Willebrand factor type A domain-containing protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A
YP_004293959.1	KEGG: neu:NE1919 nitric oxide reductase NorQ protein
YP_004293960.1	PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: slt:Slit_0986 ribulose-bisphosphate carboxylase; SMART: Ribulose bisphosphate carboxylase, small chain
YP_004293961.1	KEGG: slt:Slit_0985 ribulose-bisphosphate carboxylase; PFAM: Ribulose bisphosphate carboxylase, large subunit, C-terminal; Ribulose bisphosphate carboxylase, large subunit, N-terminal
YP_004293962.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nmu:Nmul_A0687 LysR family transcriptional regulator
YP_004293963.1	KEGG: ppr:PBPRB1928 hypothetical protein
YP_004293964.1	KEGG: sdn:Sden_3449 hypothetical protein
YP_004293965.1	TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; PFAM: Radical SAM; Methylthiotransferase, N-terminal; KEGG: nmu:Nmul_A1979 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB
YP_004293966.1	TIGRFAM: tRNA pseudouridine synthase II, TruB; HAMAP: tRNA pseudouridine synthase II, TruB; KEGG: nmu:Nmul_A1862 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal
YP_004293967.1	KEGG: nmu:Nmul_A1863 ribosome-binding factor A; TIGRFAM: Ribosome-binding factor A; PFAM: Ribosome-binding factor A
YP_004293968.1	KEGG: nmu:Nmul_A1864 translation initiation factor IF-2; TIGRFAM: Translation initiation factor aIF-2, bacterial-like; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Initiation factor 2 associated region, bacterial; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; Translation initiation factor IF- 2, domain 3
YP_004293969.1	TIGRFAM: Transcription termination factor NusA; Transcription termination factor NusA, C-terminal duplication; PFAM: Transcription factor NusA, N-terminal; Ribosomal protein S1, RNA-binding domain; KEGG: nmu:Nmul_A1865 transcription elongation factor NusA; SMART: RNA-binding domain, S1; K Homology
YP_004293970.1	PFAM: Ribosome maturation factor RimP; KEGG: nmu:Nmul_A1866 hypothetical protein
YP_004293971.1	TIGRFAM: Acetate-CoA ligase; KEGG: net:Neut_1690 acetyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase
YP_004293972.1	KEGG: nmu:Nmul_A1869 beta-lactamase-like; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like
YP_004293973.1	KEGG: nml:Namu_0602 major facilitator superfamily MFS_1
YP_004293974.1	KEGG: tmz:Tmz1t_0525 TRAP dicarboxylate transporter, DctM subunit
YP_004293975.1	PFAM: Lipocalin-like; KEGG: sbp:Sbal223_2844 lipocalin family protein
YP_004293976.1	PFAM: Protein of unknown function DUF2905; KEGG: nmu:Nmul_A0975 hypothetical protein
YP_004293977.1	PFAM: Protein of unknown function DUF2231, transmembrane; KEGG: neu:NE2151 hypothetical protein
YP_004293978.1	KEGG: net:Neut_2100 hypothetical protein
YP_004293979.1	KEGG: neu:NE2153 hypothetical protein
YP_004293980.1	KEGG: neu:NE2461 hypothetical protein
YP_004293981.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; MASE1; Diguanylate cyclase, predicted; PAS fold-3; KEGG: tgr:Tgr7_0245 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif
YP_004293982.1	KEGG: net:Neut_0132 cytochrome P460 precursor
YP_004293983.1	KEGG: nhl:Nhal_2069 nitrosocyanin; TIGRFAM: Nitrosocyanin; PFAM: Cytochrome c oxidase subunit II C-terminal
YP_004293984.1	KEGG: ptm:GSPATT00037909001 hypothetical protein
YP_004293985.1	PFAM: Protein of unknown function DUF457, transmembrane; KEGG: neu:NE0299 hypothetical protein
YP_004293986.1	PFAM: COQ9; Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: neu:NE0300 TetR family regulatory protein
YP_004293987.1	PFAM: Rhamnosyl O-methyltransferase/Cephalosporin hydroxylase; KEGG: lby:Lbys_1319 hypothetical protein
YP_004293988.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: ote:Oter_4155 GCN5-related N-acetyltransferase
YP_004293989.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: neu:NE1171 MotA/TolQ/ExbB proton channel family protein
YP_004293990.1	PFAM: VacJ-like lipoprotein; KEGG: nmu:Nmul_A2557 VacJ-like lipoprotein
YP_004293991.1	TIGRFAM: Squalene cyclase; Hopene cyclase; KEGG: net:Neut_1507 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase
YP_004293992.1	KEGG: nmu:Nmul_A2555 purine phosphorylase family protein 1; TIGRFAM: Hopanoid-associated phosphorylase HpnG; PFAM: Nucleoside phosphorylase domain
YP_004293993.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, ATP-binding/permease protein; KEGG: noc:Noc_2950 ABC efflux pump, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane domain; ABC transporter-like
YP_004293994.1	KEGG: rde:RD1_1171 type I secretion target repeat-containing protein
YP_004293995.1	PFAM: RTX toxin-activating protein C, bacteria; KEGG: btr:Btr_0686 hypothetical protein
YP_004293996.1	PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: hch:HCH_04404 parvulin-like peptidyl-prolyl isomerase
YP_004293997.1	PFAM: ABC transporter-like; KEGG: nmu:Nmul_A0895 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004293998.1	PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: nmu:Nmul_A0894 hypothetical protein
YP_004293999.1	PFAM: Hydroxyneurosporene synthase; KEGG: nmu:Nmul_A0893 putative AttH
YP_004294001.1	PFAM: Uncharacterised protein family UPF0118; KEGG: dma:DMR_30920 hypothetical membrane protein
YP_004294002.1	PFAM: SNARE associated Golgi protein; KEGG: net:Neut_0941 DedA family protein
YP_004294003.1	PFAM: Amino acid permease domain; KEGG: neu:NE0513 amino acid transporter
YP_004294004.1	KEGG: pfh:PFHG_03656 conserved hypothetical protein
YP_004294005.1	KEGG: alv:Alvin_3124 protein of unknown function DUF37; TIGRFAM: Protein of unknown function DUF37; PFAM: Protein of unknown function DUF37
YP_004294006.1	PFAM: Transposase, IS4-like; KEGG: atu:Atu4436 IS5 family transposase
YP_004294008.1	PFAM: Excinuclease ABC, C subunit, N-terminal; KEGG: cpc:Cpar_1954 excinuclease ABC C subunit domain protein
YP_004294009.1	KEGG: mdo:100020428 hypothetical protein LOC100020428
YP_004294010.1	PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: mba:Mbar_A1015 hypothetical protein
YP_004294011.1	PFAM: Nucleotidyl transferase domain; KEGG: pin:Ping_0758 DNA polymerase beta subunit
YP_004294012.1	PFAM: Protein of unknown function DUF86; KEGG: mmw:Mmwyl1_1312 hypothetical protein
YP_004294013.1	KEGG: gur:Gura_1482 hypothetical protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal
YP_004294014.1	KEGG: maq:Maqu_0077 ornithine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal
YP_004294015.1	KEGG: eba:ebA3117 hypothetical protein
YP_004294016.1	KEGG: chu:CHU_2249 pyruvate dehydrogenase (cytochrome); PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain
YP_004294017.1	PFAM: ADP-ribosylation/Crystallin J1; KEGG: nmu:Nmul_A1960 ADP-ribosylation/crystallin J1
YP_004294018.1	TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; KEGG: nmu:Nmul_A1604 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
YP_004294019.1	TIGRFAM: Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated; KEGG: net:Neut_1417 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase
YP_004294020.1	TIGRFAM: Pyridoxal-dependent decarboxylase, exosortase system type 1 associated; KEGG: nmu:Nmul_A2669 Orn/DAP/Arg decarboxylase 2; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal
YP_004294021.1	KEGG: nmu:Nmul_A1954 hypothetical protein; TIGRFAM: PEP-CTERM/exosortase system-associated acyltransferase, predicted; PFAM: Autoinducer synthesis protein
YP_004294022.1	KEGG: nmu:Nmul_A1955 hypothetical protein
YP_004294023.1	KEGG: nmu:Nmul_A1956 hypothetical protein
YP_004294024.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold; Diguanylate cyclase, predicted; KEGG: net:Neut_1425 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS
YP_004294025.1	PFAM: Ribonuclease T2; KEGG: nhl:Nhal_0810 ribonuclease T2
YP_004294026.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: gca:Galf_1102 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004294027.1	manually curated; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; KEGG: nmu:Nmul_A2384 hypothetical protein; PFAM: YjeF-related protein, N-terminal; Uncharacterised protein family, carbohydrate kinase-related
YP_004294028.1	KEGG: nmu:Nmul_A2383 phosphoribosylformylglycinamidine synthase; manually curated; TIGRFAM: Phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; HAMAP: Phosphoribosylformylglycinamidine synthase, bacterial
YP_004294029.1	KEGG: nmu:Nmul_A2382 PDZ/DHR/GLGF; PFAM: Domain of unknown function DUF399; SMART: PDZ/DHR/GLGF
YP_004294030.1	PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; KEGG: nmu:Nmul_A2381 peptidase M1, membrane alanine aminopeptidase
YP_004294031.1	KEGG: nmu:Nmul_A1113 heavy metal efflux pump CzcA; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein
YP_004294032.1	KEGG: nmu:Nmul_A1112 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004294033.1	PFAM: Outer membrane efflux protein; KEGG: net:Neut_1767 outer membrane efflux protein
YP_004294034.1	KEGG: cja:CJA_3563 hypothetical protein
YP_004294035.1	PFAM: Protein of unknown function DUF3579; KEGG: cvi:CV_1990 hypothetical protein
YP_004294036.1	KEGG: app:CAP2UW1_0860 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial
YP_004294037.1	TIGRFAM: Chorismate synthase; KEGG: net:Neut_1957 chorismate synthase; PFAM: Chorismate synthase
YP_004294038.1	KEGG: nmu:Nmul_A1257 hypothetical protein
YP_004294039.1	KEGG: nwa:Nwat_0101 hypothetical protein
YP_004294040.1	KEGG: ehi:EHI_000260 RNA recognition motif domain containing protein
YP_004294041.1	KEGG: dya:Dyak_GE20898 GE20898 gene product from transcript GE20898-RA
YP_004294042.1	KEGG: lla:L84260 hypothetical protein
YP_004294043.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: tbd:Tbd_2766 hypothetical protein
YP_004294044.1	TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; C-type lectin; KEGG: dsa:Desal_1919 C-type lectin domain protein; SMART: C-type lectin
YP_004294045.1	KEGG: nmu:Nmul_A0946 putative glutathione S-transferase
YP_004294046.1	PFAM: Helix-turn-helix, HxlR type; KEGG: nmu:Nmul_A0947 putative transcriptional regulator
YP_004294047.1	PFAM: Ammonium transporter; KEGG: nmu:Nmul_A0516 Rh-like protein/ammonium transporter
YP_004294048.1	KEGG: nmi:NMO_1071 hypothetical protein
YP_004294049.1	PFAM: Uncharacterised protein domain CNP1; KEGG: nmu:Nmul_A1844 putative lipoprotein
YP_004294050.1	PFAM: Protein of unknown function DUF3501; Cysteine-rich domain; KEGG: nmu:Nmul_A1846 putative ferredoxin
YP_004294051.1	PFAM: Rubrerythrin; KEGG: nmu:Nmul_A1847 rubrerythrin
YP_004294052.1	KEGG: nmu:Nmul_A1922 major facilitator transporter
YP_004294053.1	TIGRFAM: 3-isopropylmalate dehydratase, large subunit; KEGG: neu:NE0685 isopropylmalate isomerase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
YP_004294054.1	KEGG: nmu:Nmul_A1919 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel
YP_004294055.1	TIGRFAM: Isopropylmalate dehydrogenase; KEGG: nmu:Nmul_A1918 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase
YP_004294056.1	SMART: Semialdehyde dehydrogenase, NAD-binding; TIGRFAM: Aspartate-semialdehyde dehydrogenase, proteobacteria; KEGG: nmu:Nmul_A1917 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD-binding
YP_004294057.1	TIGRFAM: Motility protein FimV, N-terminal; Motility protein FimV, C-terminal; KEGG: neu:NE0690 transmembrane protein
YP_004294058.1	TIGRFAM: Pseudouridine synthase I, TruA; HAMAP: Pseudouridine synthase I, TruA; KEGG: nmu:Nmul_A1914 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain
YP_004294059.1	KEGG: nmu:Nmul_A1913 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI)
YP_004294060.1	PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; TIGRFAM: Tryptophan synthase, beta chain; HAMAP: Tryptophan synthase beta chain/beta chain-like; KEGG: neu:NE0693 tryptophan synthase subunit beta
YP_004294061.1	TIGRFAM: Tryptophan synthase, alpha chain; KEGG: nmu:Nmul_A1911 tryptophan synthase subunit alpha; PFAM: Tryptophan synthase, alpha chain
YP_004294062.1	TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; KEGG: net:Neut_1154 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase
YP_004294063.1	TIGRFAM: Folylpolyglutamate synthetase; KEGG: nmu:Nmul_A1909 FolC bifunctional protein; PFAM: Mur ligase, central; Mur ligase, C-terminal
YP_004294064.1	PFAM: Sporulation-related domain; KEGG: net:Neut_1156 sporulation domain-containing protein
YP_004294065.1	PFAM: Colicin V production, CvpA; KEGG: nmu:Nmul_A1907 colicin V production protein
YP_004294066.1	TIGRFAM: Amidophosphoribosyl transferase; KEGG: nmu:Nmul_A1906 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase
YP_004294067.1	KEGG: neu:NE0700 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004294068.1	KEGG: nmu:Nmul_A1885 peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
YP_004294069.1	KEGG: neu:NE0042 cyclophilin-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
YP_004294070.1	KEGG: nmu:Nmul_A1881 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia; Cysteinyl-tRNA synthetase, class Ia, DALR; manually curated; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; SMART: Cysteinyl-tRNA synthetase, class Ia, DALR
YP_004294071.1	KEGG: neu:NE0044 hypothetical protein
YP_004294072.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: neu:NE0045 flagellar motor protein MotB
YP_004294073.1	KEGG: net:Neut_0188 flagellar motor protein MotA; TIGRFAM: Flagellar motor stator, MotA; PFAM: MotA/TolQ/ExbB proton channel
YP_004294074.1	PFAM: ABC transporter, transmembrane domain; ABC transporter-like; KEGG: nmu:Nmul_A0682 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004294075.1	KEGG: lbf:LBF_0870 NRAMP-family transporter
YP_004294076.1	KEGG: neu:NE1916 hypothetical protein
YP_004294077.1	KEGG: slt:Slit_0989 hypothetical protein
YP_004294078.1	PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; KEGG: pna:Pnap_0633 sodium/hydrogen exchanger
YP_004294079.1	KEGG: shi:Shel_00990 hypothetical protein
YP_004294080.1	KEGG: neu:NE1277 hypothetical protein
YP_004294081.1	KEGG: pyo:PY05175 hypothetical protein
YP_004294082.1	PFAM: ADP-ribosylation/Crystallin J1; KEGG: neu:NE0396 hypothetical protein
YP_004294083.1	PFAM: Transposase IS3/IS911family; KEGG: rms:RMA_0745 transposase
YP_004294084.1	PFAM: Plasmid recombination enzyme; KEGG: tbd:Tbd_2002 hypothetical protein
YP_004294086.1	KEGG: pna:Pnap_2648 hypothetical protein
YP_004294087.1	KEGG: meh:M301_1799 phage transcriptional regulator, AlpA
YP_004294088.1	KEGG: msy:MS53_0495 hypothetical protein
YP_004294089.1	PFAM: Integrase, catalytic core, phage; KEGG: rso:RSc1871 putative integrase prophage protein
YP_004294090.1	PFAM: Transposase IS3/IS911family; KEGG: rms:RMA_0745 transposase
YP_004294091.1	PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region
YP_004294092.1	PFAM: MEKHLA; KEGG: nde:NIDE4343 hypothetical protein
YP_004294093.1	TIGRFAM: L-aspartate oxidase; KEGG: nmu:Nmul_A1743 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal
YP_004294094.1	KEGG: nmu:Nmul_A1746 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma-70 RpoE type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004294095.1	PFAM: Anti sigma-E protein RseA, N-terminal; KEGG: nmu:Nmul_A1747 anti sigma-E protein RseA
YP_004294096.1	PFAM: MucB/RseB; KEGG: nmu:Nmul_A1748 sigma E regulatory protein, MucB/RseB
YP_004294097.1	SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: net:Neut_1783 protease Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF
YP_004294098.1	PFAM: Glutaredoxin-like; KEGG: net:Neut_1782 glutaredoxin 2
YP_004294099.1	TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; KEGG: nmu:Nmul_A1751 GTP-binding protein LepA; SMART: Translation elongation factor EFG/EF2, C-terminal
YP_004294100.1	TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: net:Neut_1780 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region
YP_004294101.1	KEGG: neu:NE2325 transmembrane protein
YP_004294102.1	SMART: Ribonuclease III; Double-stranded RNA-binding; TIGRFAM: Ribonuclease III, bacterial; KEGG: nmu:Nmul_A1753 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA-binding
YP_004294103.1	KEGG: neu:NE2323 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2
YP_004294104.1	TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; KEGG: nmu:Nmul_A1759 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ
YP_004294105.1	KEGG: nmu:Nmul_A1760 4'-phosphopantetheinyl transferase; TIGRFAM: Holo-[acyl carrier protein] synthase; Phosphopantethiene-protein transferase; PFAM: 4'-phosphopantetheinyl transferase
YP_004294106.1	PFAM: Glycoside hydrolase, family 3, N-terminal; KEGG: slt:Slit_1287 glycoside hydrolase family 3 domain protein
YP_004294107.1	TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: nmu:Nmul_A0855 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
YP_004294108.1	KEGG: net:Neut_0544 hypothetical protein
YP_004294109.1	PFAM: Uncharacterised protein family CreA; KEGG: net:Neut_0213 CreA family protein
YP_004294110.1	KEGG: nmu:Nmul_A2642 glutamyl-tRNA reductase; TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
YP_004294111.1	TIGRFAM: Peptide chain release factor 1; PFAM: Peptide chain release factor class I/class II; Peptide chain release factor; KEGG: nmu:Nmul_A2641 peptide chain release factor 1; SMART: Peptide chain release factor
YP_004294112.1	TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; KEGG: nmu:Nmul_A2640 HemK family modification methylase; PFAM: Methyltransferase small
YP_004294113.1	KEGG: nmu:Nmul_A2639 glutaredoxin-like protein; TIGRFAM: Monothiol glutaredoxin-related; PFAM: Glutaredoxin
YP_004294114.1	PFAM: SNARE associated Golgi protein; KEGG: nmu:Nmul_A2638 putative inner membrane protein
YP_004294115.1	KEGG: rsk:RSKD131_2511 hemolysin-type calcium-binding toxin
YP_004294116.1	KEGG: mmw:Mmwyl1_0245 cytidyltransferase-like protein; TIGRFAM: Cytidyltransferase-related; PFAM: Cytidylyltransferase; LicD-like
YP_004294117.1	PFAM: WD40-like Beta Propeller; Protein of unknown function DUF839; KEGG: tcu:Tcur_2162 protein of unknown function DUF839
YP_004294118.1	KEGG: nmu:Nmul_A1597 hypothetical protein
YP_004294119.1	PFAM: Protein of unknown function DUF1624; KEGG: cps:CPS_0458 hypothetical protein
YP_004294120.1	TIGRFAM: Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; KEGG: nmu:Nmul_A1843 gamma-glutamyl kinase; SMART: Pseudouridine synthase/archaeosine transglycosylase
YP_004294121.1	KEGG: nmu:Nmul_A1817 GTPase ObgE; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related
YP_004294122.1	KEGG: nmu:Nmul_A1816 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27; PFAM: Ribosomal protein L27
YP_004294123.1	KEGG: nmu:Nmul_A1815 50S ribosomal protein L21; TIGRFAM: Ribosomal protein L21; PFAM: Ribosomal protein L21
YP_004294124.1	manually curated; KEGG: net:Neut_0825 farnesyltranstransferase; PFAM: Polyprenyl synthetase
YP_004294125.1	TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-3; KEGG: rru:Rru_A2406 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAC motif; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004294126.1	KEGG: azo:azo3382 putative two-component system regulatory protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain
YP_004294127.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold; Signal transduction response regulator, receiver domain; PAS fold-3; Diguanylate cyclase, predicted; KEGG: neu:NE1700 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif; Signal transduction response regulator, receiver domain; GAF
YP_004294128.1	KEGG: nwa:Nwat_2651 hypothetical protein
YP_004294129.1	PFAM: Domain of unknown function DUF87; KEGG: tmz:Tmz1t_0482 protein of unknown function DUF87
YP_004294130.1	KEGG: neu:NE2094 hypothetical protein
YP_004294131.1	PFAM: Protein of unknown function DUF2130; KEGG: llo:LLO_2961 coiled-coil protein
YP_004294133.1	PFAM: Haemolysin-type calcium-binding repeat; KEGG: ppd:Ppro_2370 Ig family protein
YP_004294134.1	KEGG: bam:Bamb_1619 major facilitator transporter
YP_004294135.1	TIGRFAM: Queuosine biosynthesis protein; HAMAP: Queuosine biosynthesis protein; KEGG: neu:NE1140 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein
YP_004294136.1	TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; KEGG: nmu:Nmul_A2429 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase
YP_004294137.1	KEGG: net:Neut_1432 preprotein translocase, YajC subunit; TIGRFAM: Preprotein translocase YajC; PFAM: Preprotein translocase YajC
YP_004294138.1	KEGG: nmu:Nmul_A2427 preprotein translocase subunit SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein, bacteria; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal
YP_004294139.1	KEGG: nmu:Nmul_A2426 preprotein translocase subunit SecF; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein, bacteria; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal
YP_004294140.1	KEGG: spl:Spea_3669 hypothetical protein
YP_004294141.1	PFAM: IstB-like ATP-binding protein; Integrase, catalytic core; KEGG: mms:mma_2809 transposase IstA
YP_004294143.1	PFAM: Cell division protein ZapA-like; KEGG: neu:NE1890 hypothetical protein
YP_004294144.1	KEGG: neu:NE1891 hypothetical protein
YP_004294145.1	KEGG: neu:NE2283 hypothetical protein; PFAM: ZipA, C-terminal FtsZ-binding domain; SMART: ZipA, C-terminal FtsZ-binding domain
YP_004294146.1	KEGG: nmu:Nmul_A0645 chromosome segregation protein SMC; TIGRFAM: Chromosome segregation protein SMC; PFAM: RecF/RecN/SMC; SMCs flexible hinge
YP_004294147.1	TIGRFAM: Nitrile oxidoreductase, NADPH-dependent, QueF; KEGG: net:Neut_2123 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase
YP_004294148.1	KEGG: neu:NE2421 LysM motif-containing protein; PFAM: Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_004294149.1	PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; KEGG: neu:NE0569 cytosol aminopeptidase
YP_004294150.1	TIGRFAM: Thymidylate synthase; KEGG: nmu:Nmul_A1962 thymidylate synthase; PFAM: Thymidylate synthase
YP_004294151.1	PFAM: Dihydrofolate reductase domain; KEGG: nmu:Nmul_A1963 dihydrofolate reductase
YP_004294152.1	KEGG: nmu:Nmul_A1964 Orn/DAP/Arg decarboxylase 2; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal
YP_004294153.1	TIGRFAM: Conserved hypothetical protein CHP03790; KEGG: nmu:Nmul_A2461 hypothetical protein
YP_004294154.1	TIGRFAM: Deoxycytidine triphosphate deaminase; KEGG: net:Neut_1923 deoxycytidine triphosphate deaminase; PFAM: DeoxyUTP pyrophosphatase domain
YP_004294155.1	PFAM: ATPase-like, ParA/MinD; Domain of unknown function DUF59; KEGG: neu:NE0624 hypothetical protein
YP_004294156.1	TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; KEGG: neu:NE0625 methionyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding domain
YP_004294157.1	KEGG: lpp:plpp0126 hypothetical protein
YP_004294158.1	KEGG: bpt:Bpet2896 hypothetical protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal
YP_004294159.1	PFAM: FG-GAP; KEGG: npu:Npun_F1457 putative outer membrane adhesin like proteiin
YP_004294160.1	PFAM: FG-GAP; Haemolysin-type calcium-binding repeat; KEGG: syf:Synpcc7942_1337 integrins alpha chain
YP_004294161.1	KEGG: nmu:Nmul_A0564 transmembrane protein
YP_004294162.1	TIGRFAM: Homoserine kinase ThrB; KEGG: nmu:Nmul_A0565 homoserine kinase; PFAM: Aminoglycoside phosphotransferase
YP_004294163.1	PFAM: Protein of unknown function DUF2782; KEGG: net:Neut_0776 hypothetical protein
YP_004294164.1	KEGG: net:Neut_0777 hypothetical protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG
YP_004294165.1	TIGRFAM: DNA polymerase 1; PFAM: DNA-directed DNA polymerase, family A, palm domain; 3'-5' exonuclease; 5'-3' exonuclease, alpha-helical arch, N-terminal; 5'-3' exonuclease, SAM-fold domain; KEGG: nmu:Nmul_A0568 DNA polymerase I; SMART: 5'-3' exonuclease, N-terminal; DNA-directed DNA polymerase, family A, palm domain; 3'-5' exonuclease; Helix-hairpin-helix motif, class 2
YP_004294166.1	TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA-binding domain; KEGG: net:Neut_1707 ribonuclease, Rne/Rng family protein; SMART: RNA-binding domain, S1
YP_004294167.1	TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: neu:NE1456 ribosomal large subunit pseudouridine synthase C; SMART: RNA-binding S4
YP_004294168.1	KEGG: nmu:Nmul_A1973 arylesterase; PFAM: Lipase, GDSL
YP_004294169.1	SMART: ATPase, AAA+ type, core; manually curated; KEGG: nmu:Nmul_A1972 ABC transporter related; PFAM: ABC transporter-like
YP_004294170.1	PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: nmu:Nmul_A0948 hypothetical protein
YP_004294171.1	TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; KEGG: nmu:Nmul_A0068 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB
YP_004294172.1	PFAM: Formate/nitrite transporter; KEGG: pjd:Pjdr2_5915 formate/nitrite transporter
YP_004294173.1	KEGG: xca:xccb100_1049 hypothetical protein
YP_004294174.1	KEGG: nmu:Nmul_A1469 hypothetical protein
YP_004294175.1	KEGG: nmu:Nmul_A1468 hypothetical protein
YP_004294176.1	TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; KEGG: net:Neut_2082 two component transcriptional regulator, winged helix family protein; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004294177.1	TIGRFAM: Oxaloacetate decarboxylase, alpha subunit; KEGG: alv:Alvin_1668 oxaloacetate decarboxylase alpha subunit; PFAM: Carboxylase, conserved domain; Pyruvate carboxyltransferase; Biotin/lipoyl attachment
YP_004294178.1	SMART: Biotin carboxylase, C-terminal; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; KEGG: alv:Alvin_1669 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase, large subunit, N-terminal
YP_004294179.1	TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: tmz:Tmz1t_1906 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004294180.1	PFAM: SEC-C motif; KEGG: dar:Daro_3857 SecC motif-containing protein
YP_004294181.1	KEGG: app:CAP2UW1_3691 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like
YP_004294182.1	KEGG: mfa:Mfla_2030 abortive infection protein; TIGRFAM: Prenyl protease-related; PFAM: Abortive infection protein
YP_004294183.1	PFAM: Type IV pilus assembly PilZ; KEGG: slt:Slit_1652 type IV pilus assembly PilZ
YP_004294184.1	PFAM: Protein of unknown function DUF1597; KEGG: nmu:Nmul_A0439 hypothetical protein
YP_004294185.1	KEGG: nmu:Nmul_A1976 pseudouridine synthase, RluD; TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F
YP_004294186.1	KEGG: nmu:Nmul_A1975 TPR repeat-containing protein; manually curated; TIGRFAM: Outer membrane assembly lipoprotein YfiO
YP_004294187.1	PFAM: UspA; KEGG: net:Neut_2476 UspA domain-containing protein
YP_004294188.1	KEGG: nmu:Nmul_A1494 esterase/lipase/thioesterase family protein
YP_004294189.1	PFAM: FecR protein; KEGG: nmu:Nmul_A1046 Fe2+-dicitrate sensor membrane component-like
YP_004294190.1	KEGG: lch:Lcho_3567 hypothetical protein
YP_004294191.1	KEGG: dar:Daro_2798 response regulator receiver; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain
YP_004294192.1	KEGG: nmu:Nmul_A2195 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase
YP_004294193.1	TIGRFAM: Histidinol-phosphate aminotransferase; KEGG: nmu:Nmul_A2193 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/classII
YP_004294194.1	TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; PFAM: Prephenate dehydratase; Amino acid-binding ACT; Chorismate mutase, type II; KEGG: neu:NE0335 prephenate dehydratase/chorismate mutase; SMART: Chorismate mutase
YP_004294195.1	KEGG: nmu:Nmul_A2191 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_004294196.1	TIGRFAM: Phosphoserine aminotransferase, subgroup; KEGG: nmu:Nmul_A2190 phosphoserine aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_004294197.1	SMART: DNA topoisomerase, type IIA, subunit A/C-terminal; TIGRFAM: DNA gyrase, subunit A; KEGG: nmu:Nmul_A2189 DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel
YP_004294198.1	TIGRFAM: Acetylornithine/succinylornithine aminotransferase; KEGG: nmu:Nmul_A1041 acetylornithine aminotransferase; PFAM: Aminotransferase class-III
YP_004294199.1	TIGRFAM: Ornithine carbamoyltransferase; KEGG: net:Neut_2066 ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
YP_004294200.1	TIGRFAM: Argininosuccinate synthase; KEGG: nmu:Nmul_A1043 argininosuccinate synthase; PFAM: Argininosuccinate synthase
YP_004294201.1	PFAM: Protein of unknown function DUF520; KEGG: nmu:Nmul_A1044 putative nucleotide-binding protein
YP_004294202.1	KEGG: nmu:Nmul_A0762 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacteria; PFAM: Ribosomal protein S12/S23
YP_004294203.1	KEGG: neu:NE2054 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7
YP_004294204.1	TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; KEGG: nmu:Nmul_A0764 elongation factor G; SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal
YP_004294205.1	KEGG: neu:NE2052 elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal
YP_004294206.1	KEGG: neu:NE0400 30S ribosomal protein S10; TIGRFAM: Ribosomal protein S10 subgroup; PFAM: Ribosomal protein S10
YP_004294207.1	KEGG: nmu:Nmul_A0767 ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3
YP_004294208.1	PFAM: Ribosomal protein L4/L1e; KEGG: nmu:Nmul_A0768 50S ribosomal protein L4
YP_004294209.1	PFAM: Ribosomal protein L25/L23; KEGG: nmu:Nmul_A0769 ribosomal L23 protein
YP_004294210.1	KEGG: nmu:Nmul_A0770 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal protein L2, C-terminal; Ribosomal Proteins L2, RNA binding domain
YP_004294211.1	KEGG: gca:Galf_0562 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19/S15
YP_004294212.1	KEGG: nmu:Nmul_A0772 ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22/L17
YP_004294213.1	TIGRFAM: Ribosomal protein S3, bacterial; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; KEGG: nmu:Nmul_A0773 30S ribosomal protein S3; SMART: K Homology
YP_004294214.1	KEGG: bpy:Bphyt_3637 50S ribosomal protein L16; TIGRFAM: Ribosomal protein L16; PFAM: Ribosomal protein L10e/L16
YP_004294215.1	KEGG: bgl:bglu_1g02660 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29
YP_004294216.1	KEGG: nmu:Nmul_A0776 ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17
YP_004294217.1	KEGG: nmu:Nmul_A0777 ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; PFAM: Ribosomal protein L14b/L23e
YP_004294218.1	TIGRFAM: Ribosomal protein L24; PFAM: KOW; KEGG: dar:Daro_0330 50S ribosomal protein L24; SMART: KOW
YP_004294219.1	PFAM: Ribosomal protein L5; KEGG: nmu:Nmul_A0779 50S ribosomal protein L5
YP_004294220.1	PFAM: Ribosomal protein S14; KEGG: nmu:Nmul_A0780 ribosomal protein S14
YP_004294221.1	PFAM: Ribosomal protein S8; KEGG: nmu:Nmul_A0781 ribosomal protein S8
YP_004294222.1	KEGG: nmu:Nmul_A0782 ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6, alpha-beta domain
YP_004294223.1	KEGG: nmu:Nmul_A0783 ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal protein L18/L5
YP_004294224.1	KEGG: nmu:Nmul_A0784 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, C-terminal; Ribosomal protein S5, N-terminal
YP_004294225.1	KEGG: dia:Dtpsy_0391 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30, ferredoxin-like fold domain
YP_004294226.1	KEGG: mei:Msip34_0321 ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; PFAM: Ribosomal protein L18e/L15
YP_004294227.1	KEGG: nmu:Nmul_A0787 preprotein translocase subunit SecY; TIGRFAM: SecY protein; PFAM: SecY protein
YP_004294228.1	TIGRFAM: Translation initiation factor IF-1; PFAM: RNA-binding domain, S1, IF1 type; KEGG: nmu:Nmul_A0788 translation initiation factor IF-1; SMART: RNA-binding domain, S1
YP_004294229.1	KEGG: nmu:Nmul_A0789 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13
YP_004294230.1	KEGG: nmu:Nmul_A0790 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; PFAM: Ribosomal protein S11
YP_004294231.1	TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: Ribosomal protein S4/S9, N-terminal; RNA-binding S4; KEGG: nmu:Nmul_A0791 30S ribosomal protein S4; SMART: RNA-binding S4
YP_004294232.1	TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase, alpha subunit, C-terminal; DNA-directed RNA polymerase, insert domain; DNA-directed RNA polymerase, dimerisation; KEGG: nmu:Nmul_A0792 DNA-directed RNA polymerase subunit alpha; SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type
YP_004294233.1	KEGG: nmu:Nmul_A0793 ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17
YP_004294234.1	TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; KEGG: meh:M301_1880 biotin/acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; Biotin protein ligase, C-terminal
YP_004294235.1	KEGG: nmu:Nmul_A2081 pantothenate kinase; TIGRFAM: Type III pantothenate kinase; PFAM: Type III pantothenate kinase
YP_004294236.1	KEGG: nmu:Nmul_A2080 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; PFAM: GTP-binding protein, HSR1-related
YP_004294237.1	KEGG: neu:NE2457 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase
YP_004294238.1	KEGG: net:Neut_1808 penicillin-binding protein, 1A family protein; TIGRFAM: Penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase
YP_004294239.1	TIGRFAM: Type IV pilus assembly protein PilM; KEGG: slt:Slit_0108 type IV pilus assembly protein PilM
YP_004294240.1	PFAM: Fimbrial assembly; KEGG: neu:NE2315 putative type 4 fimbrial biogenesis protein PilN
YP_004294241.1	KEGG: neu:NE2314 putative fimbrial type-4 assembly membrane transmembrane protein
YP_004294242.1	PFAM: Pilus assembly protein PilP; KEGG: net:Neut_1804 pilus assembly protein, PilQ
YP_004294243.1	TIGRFAM: Type IV pilus secretin PilQ; PFAM: Type II/III secretion system; Secretin/TonB, short N-terminal; KEGG: net:Neut_1803 type IV pilus secretin PilQ; SMART: Secretin/TonB, short N-terminal
YP_004294244.1	KEGG: nmu:Nmul_A1127 tRNA/rRNA methyltransferase (SpoU); TIGRFAM: RNA methyltransferase TrmH, group 2; PFAM: tRNA/rRNA methyltransferase, SpoU
YP_004294245.1	PFAM: Phosphoribosyltransferase; KEGG: nmu:Nmul_A1128 phosphoribosyltransferase
YP_004294246.1	SMART: Biotin/thiamin synthesis-associated protein; Elongator protein 3/MiaB/NifB; TIGRFAM: Biotin synthase; KEGG: neu:NE2300 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM
YP_004294247.1	TIGRFAM: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; KEGG: net:Neut_2137 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/classII
YP_004294248.1	TIGRFAM: Carboxylesterase BioH; KEGG: neu:NE2298 biotin biosynthesis protein BioH; PFAM: Alpha/beta hydrolase fold-1
YP_004294249.1	KEGG: nmu:Nmul_A1132 biotin biosynthesis protein BioC; TIGRFAM: Biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11
YP_004294250.1	KEGG: nmu:Nmul_A1133 dithiobiotin synthetase; TIGRFAM: Dethiobiotin synthase; PFAM: Cobyrinic acid a,c-diamide synthase
YP_004294251.1	KEGG: azo:azo2627 hypothetical protein
YP_004294252.1	PFAM: Protein of unknown function DUF3175; KEGG: rva:Rvan_2708 hypothetical protein
YP_004294253.1	KEGG: sna:Snas_5583 transcriptional regulator, AsnC family
YP_004294254.1	KEGG: bja:bll4865 putative carbonic anhydrase; PFAM: Carbonic anhydrase; SMART: Carbonic anhydrase
YP_004294255.1	KEGG: reu:Reut_A3452 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 28; UDP-glucuronosyl/UDP-glucosyltransferase
YP_004294256.1	PFAM: ThiJ/PfpI; KEGG: neu:NE2259 ThiJ/PfpI family protein
YP_004294257.1	KEGG: alv:Alvin_1116 hypothetical protein
YP_004294258.1	KEGG: sro:Sros_8312 hypothetical protein
YP_004294259.1	KEGG: vsa:VSAL_II0890 hypothetical protein
YP_004294260.1	KEGG: dap:Dacet_1288 hypothetical protein
YP_004294261.1	KEGG: net:Neut_2126 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; Metal-dependent hydrolase HDOD; SMART: Diguanylate phosphodiesterase, EAL domain
YP_004294262.1	PFAM: Abortive infection protein; KEGG: sli:Slin_5619 hypothetical protein
YP_004294263.1	PFAM: CHRD; KEGG: ppm:PPSC2_c2409 CHRD domain containing protein
YP_004294264.1	PFAM: Putative thiol-disulphide oxidoreductase DCC; KEGG: ppr:PBPRB0254 hypothetical protein
YP_004294265.1	KEGG: ang:An11g01740 hypothetical protein
YP_004294266.1	PFAM: Bile acid:sodium symporter; KEGG: tgr:Tgr7_1550 bile acid:sodium symporter
YP_004294268.1	PFAM: Domain of unknown function DUF190; KEGG: net:Neut_1273 hypothetical protein
YP_004294269.1	TIGRFAM: Camphor resistance CrcB protein; HAMAP: Camphor resistance CrcB protein; KEGG: net:Neut_1274 CrcB protein; PFAM: Camphor resistance CrcB protein
YP_004294270.1	PFAM: Protein of unknown function DUF81; KEGG: aca:ACP_0714 hypothetical protein
YP_004294271.1	PFAM: Divalent ion symporter; Regulator of K+ conductance, C-terminal; KEGG: tgr:Tgr7_0867 TrkA-C domain protein
YP_004294272.1	PFAM: Divalent ion symporter; Regulator of K+ conductance, C-terminal; KEGG: dat:HRM2_43470 putative di- and tricarboxylate transporter
YP_004294273.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: net:Neut_1373 transcriptional regulator, LysR family protein
YP_004294274.1	KEGG: lwe:lwe0218 putative secreted lipoprotein
YP_004294275.1	KEGG: noc:Noc_0082 sulfotransferase; PFAM: Sulfotransferase domain
YP_004294276.1	TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: net:Neut_2377 Mg chelatase, subunit ChlI; SMART: ATPase, AAA+ type, core
YP_004294277.1	PFAM: Protein of unknown function DUF526; KEGG: net:Neut_2376 hypothetical protein
YP_004294278.1	PFAM: Aminoglycoside phosphotransferase; KEGG: nmu:Nmul_A0126 aminoglycoside phosphotransferase
YP_004294279.1	PFAM: Nucleotidyl transferase; KEGG: nmu:Nmul_A0127 nucleotidyl transferase
YP_004294280.1	PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; KEGG: neu:NE2147 M24 family metallopeptidase
YP_004294281.1	KEGG: net:Neut_2094 hypothetical protein
YP_004294282.1	KEGG: neu:NE1123 penicillin amidase; PFAM: Peptidase S45, penicillin amidase
YP_004294283.1	KEGG: net:Neut_2443 flagellar biosynthesis protein FlhB; TIGRFAM: Flagellar biosynthetic protein FlhB; PFAM: Type III secretion exporter
YP_004294284.1	KEGG: net:Neut_2444 flagellar biosynthesis protein FlhA; TIGRFAM: Flagellar biosynthesis protein FlhA; PFAM: Type III secretion system FHIPEP
YP_004294285.1	TIGRFAM: Signal-recognition particle (SRP)-type GTPase; PFAM: Signal recognition particle, SRP54 subunit, GTPase; KEGG: neu:NE2489 flagellar biosynthesis regulator FlhF; SMART: Signal recognition particle, SRP54 subunit, GTPase; ATPase, AAA+ type, core
YP_004294286.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: neu:NE2490 putative MinD-related protein
YP_004294287.1	KEGG: net:Neut_2447 RNA polymerase, sigma 28 subunit; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3
YP_004294288.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: dar:Daro_0744 flagellar motor protein
YP_004294289.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: nmu:Nmul_A1315 flagellar motor protein MotD
YP_004294290.1	PFAM: FlgN-like domain; KEGG: net:Neut_2438 FlgN family protein
YP_004294291.1	KEGG: neu:NE2478 hypothetical protein; TIGRFAM: Anti-sigma-28 factor, FlgM; PFAM: Anti-sigma-28 factor, FlgM
YP_004294292.1	PFAM: Uncharacterised protein family CysZ; KEGG: nmu:Nmul_A1878 transmembrane protein
YP_004294293.1	PFAM: Protein of unknown function DUF3025; KEGG: gca:Galf_1122 hypothetical protein
YP_004294295.1	PFAM: Nucleoside diphosphate kinase; KEGG: bpr:GBP346_A2301 nucleoside diphosphate kinase; SMART: Nucleoside diphosphate kinase
YP_004294296.1	TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; KEGG: nmu:Nmul_A2379 hypothetical protein; PFAM: Radical SAM
YP_004294297.1	KEGG: net:Neut_2170 type IV pilus biogenesis/stability protein PilW; TIGRFAM: Pilus biogenesis/stability type IV, PilW; PFAM: Tetratricopeptide TPR-1
YP_004294298.1	SMART: Helix-turn-helix type 3; KEGG: neu:NE0147 hypothetical protein
YP_004294299.1	KEGG: net:Neut_2168 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type
YP_004294300.1	TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: neu:NE0150 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding
YP_004294301.1	PFAM: Protein of unknown function DUF2133; KEGG: nmu:Nmul_A2375 hypothetical protein
YP_004294302.1	KEGG: neu:NE0152 PQQ repeat-containing protein; TIGRFAM: Outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat
YP_004294303.1	TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; KEGG: nmu:Nmul_A2373 GTP-binding protein EngA; SMART: ATPase, AAA+ type, core
YP_004294304.1	KEGG: vap:Vapar_1531 two component transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain
YP_004294305.1	KEGG: mca:MCA1082 hypothetical protein
YP_004294308.1	PFAM: Transposase IS3/IS911family; KEGG: rms:RMA_0745 transposase
YP_004294309.1	PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region
YP_004294310.1	PFAM: NAD-dependent epimerase/dehydratase; Domain of unknown function DUF1731, C-terminal; KEGG: npu:Npun_R0504 hypothetical protein
YP_004294311.1	KEGG: rbi:RB2501_13709 deoxyribodipyrimidine photolyase-class I; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal
YP_004294312.1	KEGG: pca:Pcar_0627 hypothetical protein
YP_004294313.1	KEGG: nmu:Nmul_A1142 hypothetical protein
YP_004294314.1	KEGG: net:Neut_1364 hypothetical protein
YP_004294315.1	KEGG: net:Neut_1363 peptidase
YP_004294316.1	KEGG: neu:NE1409 response regulator PhoP; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004294317.1	KEGG: neu:NE1408 sensory transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004294319.1	PFAM: Uncharacterised protein family UPF0016; KEGG: cts:Ctha_0720 protein of unknown function UPF0016
YP_004294320.1	KEGG: sde:Sde_3956 zinc-containing alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal
YP_004294321.1	PFAM: ATPase, AFG1-like; KEGG: sjp:SJA_C1-24350 putative ATPase
YP_004294322.1	PFAM: Major facilitator superfamily MFS-1; KEGG: nmu:Nmul_A0223 major facilitator transporter
YP_004294323.1	TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: nmu:Nmul_A0224 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase
YP_004294324.1	TIGRFAM: Orotate phosphoribosyl transferase, clade 1; KEGG: nmu:Nmul_A0225 orotate phosphoribosyltransferase; PFAM: Phosphoribosyltransferase
YP_004294325.1	KEGG: gpb:HDN1F_07110 hypothetical protein
YP_004294326.1	PFAM: RNA ligase domain, REL/Rln2; KEGG: dda:Dd703_3690 DNA ligase III-like protein
YP_004294327.1	KEGG: xau:Xaut_3738 hypothetical protein
YP_004294328.1	PFAM: Domain of unknown function DUF3696, C-terminal; KEGG: xau:Xaut_3739 hypothetical protein
YP_004294329.1	PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region
YP_004294330.1	PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein
YP_004294331.1	PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein
YP_004294332.1	PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit
YP_004294333.1	KEGG: gpb:HDN1F_07060 DEAD/DEAH box helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; SMART: DEAD-like helicase, N-terminal
YP_004294334.1	PFAM: Protein of unknown function DUF882; KEGG: neu:NE2572 hypothetical protein
YP_004294335.1	PFAM: YkuD domain; Peptidoglycan binding-like; KEGG: net:Neut_2532 peptidoglycan binding domain-containing protein
YP_004294336.1	PFAM: Amidohydrolase 3; KEGG: reu:Reut_B4849 hypothetical protein
YP_004294337.1	PFAM: Isochorismatase-like; KEGG: neu:NE2304 isochorismatase hydrolase family protein
YP_004294338.1	KEGG: lic:LIC12065 hypothetical protein
YP_004294339.1	PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: mpt:Mpe_A2645 pirin-related protein
YP_004294340.1	PFAM: Helix-turn-helix, HxlR type; KEGG: ava:Ava_1063 transcriptional regulator
YP_004294341.1	PFAM: Di-haem cytochrome c peroxidase; KEGG: mca:MCA2590 cytochrome c peroxidase family protein, putative
YP_004294342.1	PFAM: PEP-CTERM bacterial; KEGG: xom:XOO_2260 YapH protein
YP_004294343.1	TIGRFAM: Adenylosuccinate lyase; KEGG: nmu:Nmul_A2241 adenylosuccinate lyase; PFAM: Lyase 1, N-terminal; Adenylosuccinate lyase C-terminal/plant
YP_004294344.1	PFAM: GrpE nucleotide exchange factor; KEGG: neu:NE1950 heat shock protein GrpE
YP_004294345.1	KEGG: nmu:Nmul_A2239 molecular chaperone DnaK; TIGRFAM: Chaperone DnaK; PFAM: Heat shock protein 70
YP_004294346.1	TIGRFAM: Chaperone DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, cysteine-rich domain; Heat shock protein DnaJ, N-terminal; KEGG: nmu:Nmul_A2238 chaperone protein DnaJ; SMART: Heat shock protein DnaJ, N-terminal
YP_004294347.1	TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; Beta-lactamase-like; KEGG: nmu:Nmul_A2506 DNA internalization-related competence protein ComEC/Rec2; SMART: Beta-lactamase-like
YP_004294348.1	KEGG: nmu:Nmul_A2410 periplasmic sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004294349.1	KEGG: nmu:Nmul_A2411 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain
YP_004294350.1	PFAM: Heat shock protein Hsp33 protein; KEGG: app:CAP2UW1_0252 HSP33 protein
YP_004294351.1	TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-3; KEGG: mag:amb3536 signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAC motif
YP_004294352.1	KEGG: noc:Noc_1704 response regulator receiver; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain
YP_004294353.1	TIGRFAM: PAS; PFAM: Signal transduction response regulator, receiver domain; PAS fold; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; KEGG: bps:BPSS1358 sensor kinase protein; SMART: Signal transduction response regulator, receiver domain; PAS; PAC motif; ATPase-like, ATP-binding domain
YP_004294354.1	KEGG: nmu:Nmul_A1235 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal
YP_004294355.1	KEGG: ppr:PBPRB1378 hypothetical protein
YP_004294356.1	PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase
YP_004294357.1	KEGG: eba:ebB55 transposase, fragment; manually curated; PFAM: Transposase (putative), IS66 Orf2-like
YP_004294358.1	KEGG: dat:HRM2_44620 hypothetical protein
YP_004294359.1	KEGG: nmu:Nmul_A2086 50S ribosomal protein L31; TIGRFAM: Ribosomal protein L31; PFAM: Ribosomal protein L31
YP_004294360.1	PFAM: Cupin 2, conserved barrel; KEGG: tdn:Suden_1847 hypothetical protein
YP_004294361.1	TIGRFAM: Peptidyl-prolyl cis-trans isomerase, EpsD-type; KEGG: mfa:Mfla_2027 hypothetical protein
YP_004294362.1	KEGG: mfa:Mfla_2026 polysaccharide export protein; TIGRFAM: Polysaccharide export EpsE; PFAM: Polysaccharide export protein; Soluble ligand binding domain
YP_004294363.1	KEGG: mfa:Mfla_2025 lipopolysaccharide biosynthesis; TIGRFAM: Chain length determinant protein EpsF; PFAM: Lipopolysaccharide biosynthesis
YP_004294364.1	KEGG: mmb:Mmol_1794 chain length determinant protein tyrosine kinase EpsG; TIGRFAM: Tyrosine-protein kinase, chain length determinant protein EpsG; Exopolysaccharide synthesis protein
YP_004294365.1	KEGG: nmu:Nmul_A0246 hypothetical protein; TIGRFAM: Exosortase 2; Exosortase, EpsH; PFAM: Exosortase EpsH-related
YP_004294366.1	KEGG: tbd:Tbd_1791 hypothetical protein; TIGRFAM: Methanolan biosynthesis EpsI; PFAM: Methanolan biosynthesis EpsI
YP_004294367.1	KEGG: meh:M301_0759 hypothetical protein
YP_004294368.1	PFAM: Sulfotransferase; KEGG: tra:Trad_1617 hypothetical protein
YP_004294369.1	PFAM: Sulfotransferase domain; KEGG: nhl:Nhal_1330 sulfotransferase
YP_004294370.1	KEGG: nde:NIDE1370 hypothetical protein
YP_004294371.1	PFAM: Sulfotransferase domain; KEGG: tra:Trad_2751 sulfotransferase
YP_004294372.1	PFAM: Glycosyl transferase, group 1; KEGG: meh:M301_0760 glycosyl transferase group 1
YP_004294373.1	KEGG: ppr:PBPRB1378 hypothetical protein
YP_004294374.1	PFAM: Glycosyl transferase, group 1; KEGG: rba:RB12590 hexosyltransferase
YP_004294375.1	manually curated; TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; KEGG: mca:MCA1437 sugar transferase/glycosyl transferase, WecB/TagA/CpsF family protein; PFAM: Glycosyl transferase WecB/TagA/CpsF
YP_004294376.1	PFAM: Sulfotransferase domain; KEGG: tbd:Tbd_1782 hypothetical protein
YP_004294377.1	KEGG: nmu:Nmul_A2064 hypothetical protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core
YP_004294378.1	TIGRFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; KEGG: nmu:Nmul_A2367 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C
YP_004294379.1	KEGG: neu:NE0052 hypothetical protein
YP_004294380.1	SMART: CoA-binding; TIGRFAM: Succinyl-CoA ligase, alpha subunit; KEGG: nmu:Nmul_A1995 succinyl-CoA synthetase subunit alpha; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase
YP_004294381.1	TIGRFAM: Succinyl-CoA synthetase, beta subunit; KEGG: slt:Slit_0526 succinyl-CoA synthetase, beta subunit; PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase
YP_004294382.1	KEGG: rme:Rmet_0476 hypothetical protein
YP_004294383.1	KEGG: sde:Sde_2950 hypothetical protein
YP_004294384.1	PFAM: Domain of unknown function DUF1993; KEGG: pfs:PFLU2136 hypothetical protein
YP_004294386.1	PFAM: Domain of unknown function DUF125, transmembrane; KEGG: pin:Ping_1569 hypothetical protein
YP_004294387.1	KEGG: pub:SAR11_0946 nitrogen regulation protein NtrY
YP_004294388.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; KEGG: cag:Cagg_0841 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; Signal transduction response regulator, receiver domain
YP_004294389.1	KEGG: vcj:VCD_003183 glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase); TIGRFAM: Alpha-L-glutamate ligase-related protein; PFAM: Prokaryotic glutathione synthetase, ATP-binding
YP_004294390.1	KEGG: vfm:VFMJ11_0986 hypothetical protein
YP_004294391.1	PFAM: Protein of unknown function DUF785; KEGG: dak:DaAHT2_0347 protein of unknown function DUF785
YP_004294392.1	KEGG: nmr:Nmar_1456 hypothetical protein
YP_004294393.1	KEGG: nmu:Nmul_A0515 dihydrolipoamide dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Biotin/lipoyl attachment
YP_004294394.1	TIGRFAM: Gamma-glutamyl phosphate reductase GPR; KEGG: nmu:Nmul_A0514 gamma-glutamyl phosphate reductase; PFAM: Aldehyde dehydrogenase domain
YP_004294395.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: app:CAP2UW1_3451 putative signal transduction protein
YP_004294396.1	KEGG: mmb:Mmol_1781 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial
YP_004294397.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cpb:Cphamn1_1508 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004294398.1	TIGRFAM: Alpha-glucan phosphorylase; KEGG: nmu:Nmul_A0715 alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35
YP_004294399.1	TIGRFAM: Glucokinase; KEGG: nmu:Nmul_A1872 glucokinase; PFAM: Glucokinase
YP_004294400.1	PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, putative; KEGG: pol:Bpro_1966 protein of unknown function DUF853, NPT hydrolase putative
YP_004294401.1	KEGG: det:DET0629 D-ala D-ala ligase; PFAM: D-alanine--D-alanine ligase, C-terminal
YP_004294402.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: gym:GYMC10_0157 GCN5-related N-acetyltransferase
YP_004294403.1	TIGRFAM: Diaminopimelate epimerase; KEGG: mev:Metev_0484 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase
YP_004294404.1	KEGG: mno:Mnod_1082 hypothetical protein
YP_004294405.1	KEGG: azo:azo1327 GTP-binding protein HflX; TIGRFAM: GTP-binding protein, HflX; PFAM: GTP-binding protein, HSR1-related
YP_004294406.1	SMART: RelA/SpoT; Metal-dependent phosphohydrolase, HD domain; TIGRFAM: RelA/SpoT protein; KEGG: neu:NE0368 bifunctional enzyme (p)ppGpp synthetase II and guanosine-3',5'-bisdiphosphate 3'-pyro; PFAM: RelA/SpoT; TGS; Metal-dependent phosphohydrolase, HD subdomain
YP_004294407.1	KEGG: nmu:Nmul_A0051 DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase, subunit omega/K/RPABC2
YP_004294408.1	SMART: Guanylate kinase/L-type calcium channel; TIGRFAM: Guanylate kinase, sub-group; KEGG: nmu:Nmul_A0052 guanylate kinase; PFAM: Guanylate kinase
YP_004294409.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: dar:Daro_1602 protein kinase:GAF
YP_004294410.1	TIGRFAM: Peptide methionine sulphoxide reductase MsrA; KEGG: nmu:Nmul_A2452 methionine sulfoxide reductase A; PFAM: Peptide methionine sulphoxide reductase MsrA
YP_004294411.1	PFAM: DSBA-like thioredoxin domain; KEGG: nmu:Nmul_A2454 DsbA oxidoreductase
YP_004294412.1	PFAM: Sporulation-related domain; KEGG: neu:NE0365 hypothetical protein
YP_004294413.1	TIGRFAM: Arginyl-tRNA synthetase, class Ic; KEGG: nmu:Nmul_A2456 arginyl-tRNA synthetase
YP_004294414.1	TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; KEGG: nmu:Nmul_A1952 RNA methyltransferase TrmH, group 3; SMART: RNA 2-O ribose methyltransferase, substrate binding
YP_004294415.1	TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria; PFAM: Ribonuclease II/R; Ribonuclease B, N-terminal OB domain; Ribosomal protein S1, RNA-binding domain; KEGG: nmu:Nmul_A1953 VacB/RNase II family 3'-5' exoribonuclease; SMART: Ribonuclease II/R; Cold shock protein; RNA-binding domain, S1
YP_004294417.1	TIGRFAM: RNA polymerase-binding, DksA; KEGG: nmu:Nmul_A2552 TraR/DksA family transcriptional regulator
YP_004294418.1	KEGG: nmu:Nmul_A2553 polynucleotide phosphorylase/polyadenylase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA-binding domain; TIGRFAM: Polyribonucleotide nucleotidyltransferase; HAMAP: Polyribonucleotide nucleotidyltransferase; SMART: RNA-binding domain, S1; K Homology
YP_004294419.1	KEGG: nmu:Nmul_A2554 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15
YP_004294420.1	PFAM: Dynamin, GTPase domain; KEGG: neu:NE1856 hypothetical protein
YP_004294421.1	KEGG: ppr:PBPRB1378 hypothetical protein
YP_004294422.1	KEGG: nmu:Nmul_A1737 glycine cleavage T protein (aminomethyl transferase); TIGRFAM: Folate-binding, YgfZ; PFAM: Glycine cleavage T-protein, N-terminal
YP_004294423.1	KEGG: nmu:Nmul_A1738 hypothetical protein
YP_004294424.1	KEGG: fba:FIC_01038 hypothetical protein
YP_004294425.1	KEGG: neu:NE0096 hypothetical protein
YP_004294426.1	KEGG: aas:Aasi_1042 hypothetical protein
YP_004294427.1	KEGG: nmu:Nmul_A0562 phosphoribulokinase; PFAM: Phosphoribulokinase/uridine kinase
YP_004294428.1	PFAM: DNA helicase, UvrD/REP type; KEGG: nmu:Nmul_A0563 UvrD/REP helicase
YP_004294429.1	KEGG: cyt:cce_4430 putative sialidase
YP_004294430.1	KEGG: cyt:cce_4430 putative sialidase
YP_004294431.1	PFAM: BolA protein; KEGG: neu:NE0913 BolA-like protein
YP_004294432.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nhl:Nhal_1613 LysR substrate-binding protein
YP_004294435.1	KEGG: eca:ECA0866 dihydroxyacetone kinase; PFAM: Dak kinase; Dak phosphatase
YP_004294436.1	TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; PAS fold; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; KEGG: net:Neut_0219 multi-sensor hybrid histidine kinase; SMART: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; PAS; Signal transduction histidine kinase, phosphotransfer (Hpt) domain
YP_004294437.1	PFAM: Protein of unknown function DUF2320; KEGG: har:HEAR0712 hypothetical protein
YP_004294438.1	KEGG: mfa:Mfla_2028 sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase
YP_004294439.1	KEGG: ppr:PBPRB1378 hypothetical protein
YP_004294440.1	PFAM: Ferredoxin, C-terminal; 4Fe-4S binding domain; KEGG: neu:NE0006 7Fe ferredoxin
YP_004294441.1	TIGRFAM: DNA repair protein, predicted; KEGG: nmu:Nmul_A0722 hypothetical protein
YP_004294442.1	PFAM: DNA helicase, UvrD/REP type; KEGG: nmu:Nmul_A0723 UvrD/REP helicase
YP_004294443.1	KEGG: nmu:Nmul_A2766 ammonia monooxygenase/methane monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C
YP_004294444.1	KEGG: nmu:Nmul_A2765 ammonia monooxygenase; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A
YP_004294445.1	KEGG: nmu:Nmul_A2764 monooxygenase subunit B protein; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B
YP_004294446.1	PFAM: Rhodanese-like; KEGG: cyb:CYB_1025 rhodanese domain-containing protein
YP_004294447.1	PFAM: Amino acid permease domain; KEGG: tpr:Tpau_0951 amino acid permease-associated region
YP_004294448.1	KEGG: nmu:Nmul_A2075 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Pyridine nucleotide-disulphide oxidoreductase, dimerisation
YP_004294449.1	TIGRFAM: Gamma-glutamyltranspeptidase; KEGG: bav:BAV2817 gamma-glutamyltranspeptidase; PFAM: Gamma-glutamyltranspeptidase
YP_004294450.1	KEGG: dba:Dbac_1033 transport-associated; PFAM: Transport-associated; SMART: Transport-associated and nodulation domain, bacteria
YP_004294451.1	PFAM: Protein of unknown function DUF1207; KEGG: nmu:Nmul_A0641 hypothetical protein
YP_004294452.1	PFAM: Ribosomal RNA adenine methylase transferase; KEGG: mms:mma_1953 hypothetical protein
YP_004294454.1	KEGG: hel:HELO_4305 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal; Sporulation-related domain
YP_004294455.1	KEGG: nmu:Nmul_A0069 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N-7) methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase
YP_004294456.1	PFAM: Thiazole biosynthesis; KEGG: nmu:Nmul_A0070 thiazole synthase
YP_004294457.1	KEGG: net:Neut_0324 thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS
YP_004294458.1	PFAM: Peptidase M10B, serralysin, C-terminal; KEGG: npu:Npun_F4619 hemolysin-type calcium-binding region; SMART: Peptidase, metallopeptidase
YP_004294459.1	PFAM: Nucleotide-binding protein, predicted, TIR-like; KEGG: cps:CPS_2866 hypothetical protein
YP_004294460.1	PFAM: Filamentation induced by cAMP/death on curing-related; Protein of unknown function DUF977; KEGG: net:Neut_2415 filamentation induced by cAMP protein Fic
YP_004294461.1	KEGG: ton:TON_1836 GalE-2 UDP-glucose 4-epimerase
YP_004294462.1	KEGG: mca:MCA0716 hypothetical protein
YP_004294463.1	KEGG: pin:Ping_1241 hypothetical protein
YP_004294464.1	PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase
YP_004294465.1	PFAM: Transposase (putative), IS66 Orf2-like; KEGG: eba:ebB55 transposase, fragment
YP_004294466.1	KEGG: dat:HRM2_44620 hypothetical protein
YP_004294467.1	KEGG: nmu:Nmul_A1726 RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004294468.1	KEGG: nmu:Nmul_A1727 hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004294469.1	KEGG: nmu:Nmul_A1728 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004294470.1	KEGG: pin:Ping_0634 hypothetical protein
YP_004294471.1	PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit
YP_004294472.1	PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region
YP_004294473.1	PFAM: Integrase, catalytic core; KEGG: mms:mma_2809 transposase IstA
YP_004294474.1	PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; Multicopper oxidase, type 1; KEGG: sde:Sde_0315 phosphoenolpyruvate-protein phosphotransferase
YP_004294475.1	KEGG: rsl:RPSI07_mp0837 exported protein of unknown function
YP_004294476.1	KEGG: pst:PSPTO_4627 hypothetical protein
YP_004294477.1	SMART: Helix-turn-helix type 3; KEGG: neu:NE1587 helix-hairpin-helix DNA-binding motif-containing protein
YP_004294478.1	PFAM: Protein of unknown function DUF2136; KEGG: neu:NE1588 hypothetical protein
YP_004294479.1	PFAM: Protein of unknown function DUF3596; Integrase, catalytic core, phage; KEGG: lpf:lpl0179 hypothetical protein
YP_004294480.1	KEGG: ppg:PputGB1_1182 putative phage excisionase
YP_004294481.1	KEGG: meh:M301_2557 hypothetical protein
YP_004294482.1	KEGG: mfr:MFE_02050 hypothetical protein
YP_004294483.1	PFAM: Replication endonuclease, probable, phage; KEGG: mfa:Mfla_0975 bacteriophage replication gene A
YP_004294484.1	TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: neu:NE2546 HAD family hydrolase; PFAM: Haloacid dehalogenase-like hydrolase
YP_004294485.1	TIGRFAM: Ubiquinone biosynthesis O-methyltransferase; KEGG: neu:NE2547 3-demethylubiquinone-9 3-methyltransferase; PFAM: Methyltransferase type 11
YP_004294486.1	KEGG: nmu:Nmul_A2187 N-ethylammeline chlorohydrolase; PFAM: Amidohydrolase 1
YP_004294487.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: neu:NE2548 outer membrane protein
YP_004294488.1	KEGG: neu:NE2549 ATPase component ABC-type multidrug transport system; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004294489.1	KEGG: neu:NE2550 putative ABC-2 type transport system permease protein
YP_004294490.1	PFAM: ABC-type uncharacterised transport system; KEGG: nmu:Nmul_A0583 hypothetical protein
YP_004294491.1	KEGG: mfa:Mfla_0685 hypothetical protein
YP_004294492.1	SMART: DNA glycosylase/AP lyase, catalytic domain; TIGRFAM: DNA glycosylase/AP lyase; KEGG: nmu:Nmul_A0582 formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase
YP_004294493.1	TIGRFAM: Pyrroline-5-carboxylate reductase; KEGG: nmu:Nmul_A0581 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent
YP_004294494.1	PFAM: Uncharacterised protein family Ycf19; KEGG: nmu:Nmul_A0580 hypothetical protein
YP_004294495.1	PFAM: Protein of unknown function DUF167; KEGG: slt:Slit_2755 protein of unknown function DUF167
YP_004294496.1	KEGG: nmu:Nmul_A0198 phosphohistidine phosphatase, SixA; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1
YP_004294497.1	KEGG: mfa:Mfla_2138 ribosomal large subunit pseudouridine synthase E; TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F
YP_004294498.1	PFAM: Fatty acid desaturase, type 1; KEGG: nmu:Nmul_A2141 fatty acid desaturase
YP_004294499.1	KEGG: mfa:Mfla_0311 50S ribosomal protein L33; TIGRFAM: Ribosomal protein L33; PFAM: Ribosomal protein L33
YP_004294500.1	KEGG: neu:NE1465 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; PFAM: Ribosomal protein L28
YP_004294501.1	KEGG: nmu:Nmul_A2138 DNA repair protein RadC; TIGRFAM: Uncharacterised protein family UPF0758; PFAM: Uncharacterised protein family UPF0758
YP_004294502.1	TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; KEGG: nmu:Nmul_A2137 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein
YP_004294503.1	PFAM: DeoxyUTP pyrophosphatase domain; TIGRFAM: DeoxyUTP pyrophosphatase; HAMAP: DeoxyUTP pyrophosphatase; KEGG: nmu:Nmul_A2136 deoxyuridine 5'-triphosphate nucleotidohydrolase
YP_004294504.1	TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, M-domain; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: nmu:Nmul_A2134 signal recognition particle protein; SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core
YP_004294505.1	PFAM: Cytochrome c assembly protein; KEGG: nmu:Nmul_A2133 cytochrome c assembly protein
YP_004294506.1	TIGRFAM: CRISPR associated protein Cas2; KEGG: avn:Avin_31570 CRISPR-associated protein Cas2
YP_004294507.1	KEGG: cvi:CV_1229 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas1, DVULG subtype; CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1
YP_004294508.1	KEGG: cvi:CV_1228 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas4; PFAM: Dna2/Cas4, domain of unknown function DUF83
YP_004294509.1	KEGG: kla:KLLA0E07789g hypothetical protein
YP_004294510.1	KEGG: mfa:Mfla_0604 CRISPR-associated Csh2 family protein; TIGRFAM: CRISPR-associated protein Csd2; CRISPR-associated protein TM1801; PFAM: CRISPR-associated protein TM1801
YP_004294511.1	KEGG: mfa:Mfla_0603 CRISPR-associated Csd1 family protein; TIGRFAM: CRISPR-associated protein, Csd1-type; PFAM: CRISPR-associated protein, Csd1-type
YP_004294512.1	KEGG: mfa:Mfla_0602 CRISPR-associated Cas5d family protein; TIGRFAM: CRISPR-associated protein, Cas5d-type; CRISPR-associated protein Cas5, N-terminal domain; PFAM: CRISPR-associated protein, Cas5
YP_004294513.1	TIGRFAM: CRISPR-associated HD domain; Helicase Cas3, CRISPR-associated, core; Uncharacterised protein family HDIG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Metal-dependent phosphohydrolase, HD subdomain; KEGG: mfa:Mfla_0601 metal dependent phosphohydrolase; SMART: DEAD-like helicase, N-terminal; Metal-dependent phosphohydrolase, HD domain
YP_004294514.1	SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: nmu:Nmul_A2731 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type
YP_004294515.1	PFAM: Peptidase U32; KEGG: neu:NE1979 U32 family peptidase
YP_004294516.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: neu:NE1289 esterase/lipase/thioesterase family protein
YP_004294517.1	KEGG: dal:Dalk_5147 peptidoglycan-binding domain 1 protein; PFAM: Type II secretion system protein E; SMART: ATPase, AAA+ type, core
YP_004294518.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: chu:CHU_2436 outer membrane protein
YP_004294520.1	KEGG: ssm:Spirs_2557 hypothetical protein
YP_004294521.1	KEGG: tbd:Tbd_1578 MFS family transporter; manually curated; PFAM: Major facilitator superfamily, enterobactin exporter EntS
YP_004294522.1	KEGG: net:Neut_1628 carbonate dehydratase; PFAM: Carbonic anhydrase, alpha-class, catalytic domain
YP_004294523.1	KEGG: neu:NE0605 hypothetical protein
YP_004294524.1	PFAM: Acyl-CoA dehydrogenase, C-termina, bacterial type; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; KEGG: neu:NE1548 acyl-CoA dehydrogenase
YP_004294525.1	KEGG: neu:NE1549 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase
YP_004294526.1	KEGG: slt:Slit_2774 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease
YP_004294527.1	KEGG: sil:SPO2326 hypothetical protein
YP_004294528.1	manually curated; PFAM: Histidine phosphatase superfamily, clade-1; KEGG: nhl:Nhal_1105 phosphoglycerate mutase; SMART: Histidine phosphatase superfamily, clade-1
YP_004294529.1	TIGRFAM: Exopolyphosphatase; KEGG: abo:ABO_2461 hypothetical protein; PFAM: Ppx/GppA phosphatase
YP_004294530.1	PFAM: Polyphosphate kinase; TIGRFAM: Polyphosphate kinase; HAMAP: Polyphosphate kinase; KEGG: nhl:Nhal_2311 polyphosphate kinase
YP_004294531.1	KEGG: tin:Tint_1847 glucose sorbosone dehydrogenase
YP_004294532.1	KEGG: geo:Geob_1384 glycosyl transferase group 1
YP_004294533.1	PFAM: Aldehyde-lyase domain; KEGG: mvn:Mevan_0407 HpcH/HpaI aldolase
YP_004294534.1	KEGG: dfe:Dfer_3931 dTDP-4-dehydrorhamnose 3,5-epimerase
YP_004294535.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: caa:Caka_1487 TonB-dependent receptor
YP_004294536.1	PFAM: Domain of unknown function DUF2874; KEGG: mca:MCA1928 hypothetical protein
YP_004294537.1	KEGG: nhl:Nhal_3531 hypothetical protein
YP_004294539.1	PFAM: Transposase, IS4-like; KEGG: atu:Atu4436 IS5 family transposase
YP_004294540.1	KEGG: nmu:Nmul_A1113 heavy metal efflux pump CzcA; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein
YP_004294541.1	KEGG: dat:HRM2_44620 hypothetical protein
YP_004294542.1	KEGG: eba:ebB55 transposase, fragment; manually curated; PFAM: Transposase (putative), IS66 Orf2-like
YP_004294543.1	PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase
YP_004294545.1	PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: rce:RC1_0095 type III restriction enzyme, res subunit, putative
YP_004294546.1	KEGG: gca:Galf_1665 hypothetical protein
YP_004294547.1	PFAM: Zeta toxin; KEGG: gca:Galf_1664 hypothetical protein
YP_004294549.1	PFAM: DNA methylase N-4/N-6; KEGG: avn:Avin_52350 adenine specific DNA methylase N-4/N-6
YP_004294550.1	KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004294551.1	PFAM: Integrase, catalytic core; Resolvase, helix-turn-helix domain; KEGG: pst:PSPTO_B0040 ISPsy4, transposase
YP_004294552.1	PFAM: KilA, N-terminal/APSES-type HTH, DNA-binding; KEGG: plu:plu1205 hypothetical protein
YP_004294553.1	KEGG: rce:RC1_0099 helicase, SNF2 family, putative; PFAM: SNF2-related; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004294554.1	KEGG: tgr:Tgr7_1426 hypothetical protein
YP_004294555.1	KEGG: dth:DICTH_0549 MalF protein
YP_004294556.1	KEGG: neu:NE2132 aspartate kinase; TIGRFAM: Aspartate kinase domain; Aspartate kinase, monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT
YP_004294557.1	TIGRFAM: Tetraacyldisaccharide 4'-kinase; KEGG: net:Neut_2110 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide 4'-kinase
YP_004294558.1	KEGG: neu:NE0456 esterase/lipase/thioesterase family protein
YP_004294559.1	KEGG: neu:NE0783 hypothetical protein
YP_004294560.1	PFAM: Radical SAM; KEGG: neu:NE1518 hypothetical protein
YP_004294561.1	TIGRFAM: queuosine biosynthesis protein QueD; KEGG: nmu:Nmul_A1944 putative 6-pyruvoyl tetrahydropterin synthase
YP_004294562.1	KEGG: neu:NE1516 hypothetical protein; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related
YP_004294563.1	PFAM: Ankyrin repeat; KEGG: nmu:Nmul_A1380 ankyrin
YP_004294564.1	KEGG: nmu:Nmul_A1378 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004294565.1	TIGRFAM: Alanine dehydrogenase/pyridine nucleotide transhydrogenase; KEGG: pla:Plav_1557 alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal
YP_004294566.1	PFAM: Fatty acid cis-trans isomerase; KEGG: neu:NE1330 cis/trans isomerase
YP_004294567.1	KEGG: blb:BBMN68_1051 tas3
YP_004294568.1	KEGG: nmu:Nmul_A0508 hypothetical protein
YP_004294569.1	KEGG: abn:AB57_2458 hypothetical protein
YP_004294570.1	KEGG: neu:NE2376 hypothetical protein
YP_004294571.1	KEGG: noc:Noc_1222 hypothetical protein
YP_004294572.1	PFAM: Redoxin; KEGG: nhl:Nhal_2589 redoxin domain protein
YP_004294573.1	manually curated; KEGG: nhl:Nhal_2590 arginine decarboxylase
YP_004294574.1	KEGG: nhl:Nhal_2591 hypothetical protein
YP_004294575.1	PFAM: Thiamine synthesis ApbE/UPF0280; KEGG: nhl:Nhal_2592 ApbE family lipoprotein
YP_004294576.1	PFAM: Lipase, class 3; KEGG: rfr:Rfer_2719 hemolysin-type calcium-binding protein
YP_004294577.1	PFAM: UPF0103/Mediator of ErbB2-driven cell motility (Memo-related); KEGG: gca:Galf_1560 hypothetical protein
YP_004294578.1	KEGG: slt:Slit_1845 AMMECR1 domain protein; TIGRFAM: AMMECR1; PFAM: AMMECR1
YP_004294579.1	PFAM: Radical SAM; KEGG: gca:Galf_1562 radical SAM domain-containing protein
YP_004294580.1	PFAM: Protein of unknown function DUF2934; KEGG: tau:Tola_1999 hypothetical protein
YP_004294581.1	KEGG: neu:NE1279 hypothetical protein
YP_004294582.1	KEGG: net:Neut_0971 signal-transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core
YP_004294583.1	KEGG: ddi:DDB_G0283905 protein phosphatase 2A B55 regulatory subunit
YP_004294584.1	KEGG: ppr:PBPRB1378 hypothetical protein
YP_004294585.1	PFAM: Flagellar transcriptional activator; KEGG: net:Neut_0729 transcriptional activator FlhD
YP_004294586.1	PFAM: Flagellar transcriptional activator FlhC; KEGG: net:Neut_0730 transcriptional activator FlhC
YP_004294587.1	KEGG: nmu:Nmul_A1360 aminotransferase, class I and II; PFAM: Aminotransferase, class I/classII
YP_004294588.1	SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; TIGRFAM: Excinuclease ABC, B subunit; KEGG: nmu:Nmul_A1361 excinuclease ABC subunit B; HAMAP: Excinuclease ABC, B subunit; PFAM: Helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein
YP_004294589.1	KEGG: neu:NE0784 hypothetical protein
YP_004294590.1	PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: nmu:Nmul_A1870 tRNA/rRNA methyltransferase (SpoU)
YP_004294591.1	TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; KEGG: nmu:Nmul_A0819 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase, prokaryotic-type
YP_004294592.1	TIGRFAM: ATP phosphoribosyltransferase, catalytic domain; KEGG: nmu:Nmul_A0820 ATP phosphoribosyltransferase catalytic subunit; PFAM: ATP phosphoribosyltransferase, catalytic domain
YP_004294593.1	KEGG: neu:NE0870 manganese and iron superoxide dismutase; PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal
YP_004294594.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: neu:NE0869 biopolymer transport protein ExbD/TolR
YP_004294595.1	PFAM: Phosphoribosylaminoimidazole carboxylase, core; manually curated; KEGG: neu:NE0868 phosphoribosylaminoimidazole carboxylase catalytic subunit protein; TIGRFAM: Phosphoribosylaminoimidazole carboxylase, core
YP_004294596.1	TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: nmu:Nmul_A0611 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type
YP_004294597.1	TIGRFAM: SAICAR synthetase; KEGG: neu:NE0866 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase
YP_004294598.1	KEGG: nhl:Nhal_3686 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like
YP_004294599.1	PFAM: Protein of unknown function DUF465; KEGG: cps:CPS_0008 hypothetical protein
YP_004294600.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, haem export, CcmA; KEGG: nmu:Nmul_A1217 cytochrome c biogenesis protein CcmA; PFAM: ABC transporter-like
YP_004294601.1	KEGG: nmu:Nmul_A1216 heme exporter protein CcmB; TIGRFAM: Cytochrome c-type biogenesis protein CcmB; PFAM: Cytochrome c-type biogenesis protein CcmB
YP_004294602.1	KEGG: nmu:Nmul_A1212 heme exporter protein CcmC; TIGRFAM: Cytochrome c-type biogenesis protein CcmC; PFAM: Cytochrome c assembly protein
YP_004294603.1	KEGG: nmu:Nmul_A1211 hypothetical protein; manually curated; TIGRFAM: Haem exporter protein D (CcmD)
YP_004294604.1	PFAM: CcmE/CycJ protein; KEGG: neu:NE0767 cytochrome c-type biogenesis protein CcmE
YP_004294605.1	KEGG: neu:NE0768 cytochrome c-type biogenesis protein (CcmF); TIGRFAM: Cytochrome c-type biogenesis protein CcmF; PFAM: Cytochrome c assembly protein
YP_004294606.1	KEGG: net:Neut_1637 periplasmic protein thiol--disulphide oxidoreductase DsbE; TIGRFAM: Periplasmic protein thiol:disulphide oxidoreductase DsbE; PFAM: Redoxin
YP_004294607.1	PFAM: Cytochrome C biogenesis protein CcmH; KEGG: nmu:Nmul_A1207 cytochrome c biogenesis protein
YP_004294608.1	TIGRFAM: Cytochrome c-type biogenesis protein CcmI; KEGG: neu:NE0771 TPR repeat-containing protein
YP_004294609.1	PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: nmu:Nmul_A1945 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_004294610.1	TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; KEGG: net:Neut_1918 cob(I)alamin adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR
YP_004294611.1	KEGG: neu:NE0635 hypothetical protein
YP_004294612.1	KEGG: net:Neut_1916 TonB-dependent vitamin B12 receptor; TIGRFAM: TonB-dependent vitamin B12 receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004294613.1	KEGG: nhl:Nhal_0193 CHRD domain containing protein
YP_004294614.1	KEGG: nhl:Nhal_2423 hypothetical protein
YP_004294615.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: tgr:Tgr7_0559 succinylglutamate desuccinylase/aspartoacylase
YP_004294616.1	PFAM: Transglutaminase-like; KEGG: net:Neut_1183 twin-arginine translocation pathway signal
YP_004294617.1	KEGG: net:Neut_1182 carboxylesterase; PFAM: Phospholipase/carboxylesterase
YP_004294618.1	TIGRFAM: S-adenosylmethionine synthetase; KEGG: nmu:Nmul_A2541 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal
YP_004294619.1	TIGRFAM: Adenosylhomocysteinase; KEGG: neu:NE0660 S-adenosyl-L-homocysteine hydrolase; PFAM: Adenosylhomocysteinase; S-adenosyl-L-homocysteine hydrolase, NAD binding
YP_004294620.1	TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: nmu:Nmul_A2539 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase
YP_004294621.1	KEGG: nmu:Nmul_A0356 hypothetical protein
YP_004294622.1	KEGG: nmu:Nmul_A0357 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_004294623.1	TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; KEGG: neu:NE0361 pyruvate dehydrogenase subunit E1; PFAM: Transketolase, N-terminal
YP_004294624.1	KEGG: neu:NE0360 branched-chain alpha-keto acid dehydrogenase subunit E2; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding
YP_004294625.1	PFAM: Cytidylyltransferase; Nicotinamide mononucleotide adenylyltransferase, C-terminal; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; HAMAP: Probable nicotinate-nucleotide adenylyltransferase; KEGG: neu:NE0359 cytidylyltransferase
YP_004294626.1	KEGG: eba:ebA3971 hypothetical protein; TIGRFAM: Ribosome-associated, Iojap-like; PFAM: Ribosome-associated, Iojap-like
YP_004294627.1	PFAM: SPOUT methyltransferase, predicted; KEGG: nmu:Nmul_A0362 hypothetical protein
YP_004294628.1	KEGG: net:Neut_1613 maf protein; TIGRFAM: Maf-like protein; PFAM: Maf-like protein
YP_004294629.1	TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA-binding domain; KEGG: net:Neut_1614 ribonuclease, Rne/Rng family protein; SMART: RNA-binding domain, S1
YP_004294630.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: nmu:Nmul_A0398 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal
YP_004294631.1	PFAM: Phosphopantetheine-binding; KEGG: nmu:Nmul_A0397 phosphopantetheine-binding
YP_004294632.1	PFAM: Transcription elongation factor, GreA/GreB, C-terminal; KEGG: pmy:Pmen_0271 nucleoside diphosphate kinase regulator
YP_004294633.1	PFAM: Haemolysin-type calcium-binding repeat; KEGG: gsu:GSU3176 LysM domain-containing protein
YP_004294634.1	TIGRFAM: Methionine sulphoxide reductase B; KEGG: app:CAP2UW1_3719 methionine-R-sulfoxide reductase; PFAM: Methionine sulphoxide reductase B
YP_004294635.1	KEGG: nmu:Nmul_A0945 hypothetical protein
YP_004294636.1	KEGG: mfa:Mfla_1053 hypothetical protein
YP_004294637.1	KEGG: ppm:PPSC2_c2369 rtx toxins and like ca2+-binding protein
YP_004294638.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; KEGG: har:HEAR3085 hypothetical protein; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted
YP_004294639.1	KEGG: neu:NE0832 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004294640.1	KEGG: nmu:Nmul_A2623 hypothetical protein
YP_004294641.1	PFAM: Protein of unknown function DUF3422; KEGG: neu:NE1887 hypothetical protein
YP_004294642.1	TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form; KEGG: net:Neut_1760 L-serine dehydratase 1; PFAM: Serine dehydratase-like, alpha subunit; Serine dehydratase beta chain
YP_004294643.1	PFAM: BFD-like [2Fe-2S]-binding domain; KEGG: net:Neut_1196 BFD/(2Fe-2S)-binding domain-containing protein
YP_004294644.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; KEGG: nmu:Nmul_A1260 TonB-dependent siderophore receptor; SMART: Secretin/TonB, short N-terminal
YP_004294645.1	KEGG: gwc:GWCH70_2618 hypothetical protein
YP_004294646.1	PFAM: HhH-GPD domain; KEGG: eba:ebA7191 DNA-3-methyladenine glycosidase II
YP_004294647.1	KEGG: pfl:PFL_3409 ADA regulatory protein; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding
YP_004294648.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rma:Rmag_0986 LysR family transcriptional regulator
YP_004294649.1	TIGRFAM: Cobalamin-independent methionine synthase; KEGG: hch:HCH_01174 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal
YP_004294650.1	PFAM: TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C; KEGG: net:Neut_1553 TenA/THI-4 domain-containing protein
YP_004294651.1	KEGG: nmu:Nmul_A1552 aminotransferase AlaT; PFAM: Aminotransferase, class I/classII
YP_004294652.1	KEGG: nmu:Nmul_A1551 homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT
YP_004294653.1	TIGRFAM: Threonine synthase; KEGG: neu:NE2370 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004294654.1	PFAM: aminopeptidase; KEGG: app:CAP2UW1_1931 aminopeptidase
YP_004294655.1	TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: nmu:Nmul_A1855 pseudouridine synthase, Rsu; SMART: RNA-binding S4
YP_004294656.1	PFAM: Haemolysin-type calcium-binding repeat; KEGG: mei:Msip34_1985 putative rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
YP_004294657.1	TIGRFAM: Uncharacterised protein family UPF0133; HAMAP: Uncharacterised protein family UPF0133; KEGG: nmu:Nmul_A1857 hypothetical protein; PFAM: Uncharacterised protein family UPF0133
YP_004294658.1	TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: ATPase, AAA-type, core; KEGG: nmu:Nmul_A1858 DNA-directed DNA polymerase; SMART: ATPase, AAA+ type, core
YP_004294659.1	TIGRFAM: RecB family nuclease, TM0106, putative; KEGG: cyc:PCC7424_0336 hypothetical protein
YP_004294660.1	TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: tbd:Tbd_1239 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase, type II, C-terminal
YP_004294661.1	TIGRFAM: DHAP synthase, class 1; KEGG: neu:NE0831 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_004294662.1	KEGG: nmu:Nmul_A0262 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial
YP_004294663.1	KEGG: pgu:PGUG_03259 hypothetical protein
YP_004294664.1	PFAM: Major intrinsic protein; KEGG: bte:BTH_I0598 glycerol uptake facilitator protein
YP_004294665.1	KEGG: osa:9268454 Os01g0516800
YP_004294666.1	PFAM: LysR, substrate-binding; KEGG: noc:Noc_0584 extracellular solute-binding protein
YP_004294667.1	KEGG: nhl:Nhal_2980 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: Phosphate ABC transporter, permease protein PstC; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004294668.1	KEGG: nhl:Nhal_2979 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004294669.1	PFAM: ABC transporter-like; KEGG: noc:Noc_0581 ABC transporter, ATPase subunit; SMART: ATPase, AAA+ type, core
YP_004294670.1	KEGG: lch:Lcho_1709 SNARE associated Golgi protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SNARE associated Golgi protein; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Pyridine nucleotide-disulphide oxidoreductase, dimerisation
YP_004294671.1	KEGG: eel:EUBELI_00813 hypothetical protein
YP_004294673.1	KEGG: spb:M28_Spy1325 putative cell surface protein
YP_004294674.1	manually curated; KEGG: nmu:Nmul_A1413 hypothetical protein
YP_004294675.1	PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein
YP_004294676.1	PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit
YP_004294677.1	PFAM: Integrase, catalytic core; KEGG: mms:mma_2809 transposase IstA
YP_004294678.1	KEGG: edi:EDI_123220 hypothetical protein
YP_004294679.1	KEGG: sbl:Sbal_0637 hypothetical protein
YP_004294680.1	KEGG: mhu:Mhun_2063 hypothetical protein
YP_004294681.1	PFAM: Zonular occludens toxin; KEGG: neu:NE0893 hypothetical protein
YP_004294682.1	PFAM: Protein of unknown function DUF2523; KEGG: neu:NE0892 putative phage gene
YP_004294683.1	KEGG: neu:NE0891 hypothetical protein
YP_004294684.1	KEGG: aav:Aave_2001 YccS/YhfK family integral membrane protein
YP_004294685.1	PFAM: Coat protein B, bacteriophage; KEGG: neu:NE0890 hypothetical protein
YP_004294686.1	KEGG: neu:NE0888 hypothetical protein; TIGRFAM: Phage/plasmid replication protein, gene II/X; PFAM: Phage/plasmid replication protein, gene II/X, C-terminal
YP_004294687.1	KEGG: asa:ASA_2021 hypothetical protein
YP_004294688.1	KEGG: neu:NE0886 hypothetical protein
YP_004294689.1	KEGG: neu:NE0894 hypothetical protein
YP_004294690.1	KEGG: sfu:Sfum_1900 hypothetical protein
YP_004294691.1	KEGG: kse:Ksed_06350 hypothetical protein
YP_004294692.1	PFAM: Zonular occludens toxin; KEGG: neu:NE0893 hypothetical protein
YP_004294693.1	PFAM: Protein of unknown function DUF2523; KEGG: neu:NE0892 putative phage gene
YP_004294694.1	KEGG: neu:NE0891 hypothetical protein
YP_004294695.1	KEGG: bja:blr5446 hypothetical protein
YP_004294696.1	PFAM: Coat protein B, bacteriophage; KEGG: neu:NE0890 hypothetical protein
YP_004294697.1	KEGG: neu:NE0889 hypothetical protein
YP_004294698.1	PFAM: Phage/plasmid replication protein, gene II/X, C-terminal; Phage/plasmid replication protein, gene II/X, N-terminal; KEGG: neu:NE0888 hypothetical protein
YP_004294699.1	KEGG: tet:TTHERM_00370830 Guanylate-binding protein, N-terminal domain containing protein
YP_004294700.1	KEGG: neu:NE0886 hypothetical protein
YP_004294701.1	KEGG: neu:NE0894 hypothetical protein
YP_004294702.1	KEGG: mms:mma_2809 transposase IstA; PFAM: IstB-like ATP-binding protein; Integrase, catalytic core; SMART: ATPase, AAA+ type, core
YP_004294703.1	PFAM: NLP/P60; KEGG: neu:NE2364 NLP/P60
YP_004294704.1	PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; Signal transduction response regulator, receiver domain; KEGG: net:Neut_1173 chemotaxis-specific methylesterase; SMART: Signal transduction response regulator, receiver domain
YP_004294705.1	KEGG: tbd:Tbd_1616 chemoreceptor glutamine deamidase CheD; PFAM: Chemoreceptor glutamine deamidase CheD
YP_004294706.1	PFAM: MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal; MCP methyltransferase, CheR-type, all-alpha domain, N-terminal; KEGG: neu:NE1861 CheR-type MCP methyl-transferase:generic methyl-transferase; SMART: MCP methyltransferase, CheR-type
YP_004294707.1	KEGG: neu:NE1866 chemotaxis sensor histidine kinase transcription regulator protein; PFAM: CheW-like protein; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; Signal transduction histidine kinase, subgroup, homodimeric; SMART: CheW-like protein; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; ATPase-like, ATP-binding domain
YP_004294708.1	KEGG: dar:Daro_0725 response regulator receiver; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain
YP_004294709.1	KEGG: mfa:Mfla_1938 hypothetical protein
YP_004294711.1	KEGG: net:Neut_2126 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; Metal-dependent hydrolase HDOD; SMART: Diguanylate phosphodiesterase, EAL domain
YP_004294712.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: net:Neut_2127 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004294713.1	KEGG: nmr:Nmar_1252 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_004294714.1	PFAM: Protein of unknown function DUF55; KEGG: nmu:Nmul_A0614 hypothetical protein
YP_004294715.1	PFAM: Protein of unknown function DUF81; KEGG: nmu:Nmul_A0613 hypothetical protein
YP_004294716.1	KEGG: eli:ELI_14255 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase
YP_004294717.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: tbd:Tbd_0244 outer membrane protein
YP_004294718.1	KEGG: tbd:Tbd_0243 hypothetical protein
YP_004294719.1	KEGG: tgu:100229040 similar to lysophosphatidic acid receptor 2
YP_004294720.1	KEGG: nmu:Nmul_A0989 hypothetical protein
YP_004294721.1	KEGG: nmu:Nmul_A0988 putative ubiquinone biosynthesis protein UbiB; TIGRFAM: Probable ubiquinone biosynthesis protein UbiB; PFAM: ABC-1
YP_004294722.1	KEGG: nmu:Nmul_A0978 putative ferredoxin 2fe-2s protein
YP_004294723.1	KEGG: dgr:Dgri_GH10779 GH10779 gene product from transcript GH10779-RA
YP_004294724.1	TIGRFAM: Transcription termination factor Rho; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, N-terminal; Rho termination factor, RNA-binding; KEGG: neu:NE1035 transcription termination factor Rho; SMART: Cold shock protein; ATPase, AAA+ type, core; Rho termination factor, N-terminal
YP_004294725.1	KEGG: nmu:Nmul_A2084 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain
YP_004294726.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: nmu:Nmul_A0730 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004294727.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: nmu:Nmul_A0731 binding-protein dependent transport system inner membrane protein
YP_004294728.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: nmu:Nmul_A0732 extracellular solute-binding protein
YP_004294729.1	PFAM: Protein of unknown function DUF3750; KEGG: neu:NE1937 hypothetical protein
YP_004294730.1	KEGG: pfo:Pfl01_3049 hypothetical protein
YP_004294731.1	PFAM: GTP-binding protein, HSR1-related; KEGG: alv:Alvin_1744 GTP-binding protein HSR1-related protein
YP_004294732.1	PFAM: Protein of unknown function DUF697; KEGG: alv:Alvin_1745 hypothetical protein
YP_004294733.1	PFAM: Phage tail collar; KEGG: shw:Sputw3181_3688 phage tail collar domain-containing protein
YP_004294734.1	SMART: Sel1-like; KEGG: hse:Hsero_0999 SEL1 subfamily TPR repeatcontaining protein
YP_004294735.1	KEGG: spc:Sputcn32_3550 fibronectin, type III domain-containing protein
YP_004294736.1	PFAM: Glycosyl transferase, family 4; KEGG: geo:Geob_2139 phospho-N-acetylmuramoyl-pentapeptide-transferase
YP_004294737.1	PFAM: Domain of unknown function DUF3473; Polysaccharide deacetylase; KEGG: cph:Cpha266_2617 polysaccharide deacetylase
YP_004294738.1	PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: sde:Sde_0801 glycerophosphoryl diester phosphodiesterase family protein
YP_004294739.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: rva:Rvan_0114 alpha/beta hydrolase fold protein
YP_004294740.1	KEGG: smc:SmuNN2025_0192 putative histidine kinase
YP_004294741.1	KEGG: bac:BamMC406_5908 polysaccharide biosynthesis protein
YP_004294742.1	PFAM: Putative RNA methylase; S-adenosylmethionine-dependent methyltransferase; THUMP; KEGG: mca:MCA0712 23S rRNA m(2)G2445 methyltransferase; SMART: THUMP
YP_004294743.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: slt:Slit_0391 short-chain dehydrogenase/reductase SDR
YP_004294744.1	PFAM: ABC-3; KEGG: nmu:Nmul_A1230 hypothetical protein
YP_004294745.1	PFAM: ABC transporter-like; KEGG: nmu:Nmul_A1231 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004294746.1	PFAM: ABC transporter metal-binding lipoprotein; KEGG: nmu:Nmul_A1232 periplasmic solute binding protein
YP_004294747.1	PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: nmu:Nmul_A1233 TonB-dependent receptor
YP_004294748.1	PFAM: Transcription factor, NikR, nickel binding C-terminal; CopG-like DNA-binding; KEGG: nmu:Nmul_A1234 nickel responsive regulator
YP_004294749.1	KEGG: neu:NE1059 putative UreA transporter; TIGRFAM: Urea transporter, bacteria; PFAM: Urea transporter
YP_004294750.1	TIGRFAM: Urease accessory protein UreG; HAMAP: Urease accessory protein UreG; KEGG: nmu:Nmul_A1244 urease accessory protein UreG; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like
YP_004294751.1	KEGG: nmu:Nmul_A1243 urease accessory protein UreF; HAMAP: Urease accessory protein UreF; PFAM: Urease accessory protein UreF
YP_004294752.1	PFAM: UreE urease accessory, C-terminal; UreE urease accessory, N-terminal; KEGG: nmu:Nmul_A1242 UreE urease accessory-like
YP_004294753.1	TIGRFAM: Urease, alpha subunit; KEGG: nmu:Nmul_A1241 urease subunit alpha; PFAM: Amidohydrolase 1; Urease alpha-subunit, N-terminal
YP_004294754.1	TIGRFAM: Urease, beta subunit; KEGG: nmu:Nmul_A1240 urease, beta subunit; PFAM: Urease, beta subunit
YP_004294755.1	TIGRFAM: Urease, alpha/gamma subunit; KEGG: nmu:Nmul_A1239 urease, gamma subunit; PFAM: Urease, alpha/gamma subunit
YP_004294756.1	PFAM: Urease accessory protein UreD; KEGG: nmu:Nmul_A1238 urease accessory protein UreD
YP_004294757.1	KEGG: nmu:Nmul_A1237 hypothetical protein
YP_004294758.1	PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: slt:Slit_1450 fructose-bisphosphate aldolase
YP_004294759.1	KEGG: nmu:Nmul_A2289 Sel1 repeat-containing protein; PFAM: Sel1-like; SMART: Sel1-like
YP_004294760.1	PFAM: Ankyrin repeat; KEGG: mba:Mbar_A2380 hypothetical protein
YP_004294761.1	KEGG: nmu:Nmul_A0130 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Monooxygenase, FAD-binding
YP_004294762.1	KEGG: nmu:Nmul_A0131 dihydrouridine synthase TIM-barrel protein nifR3; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; PFAM: tRNA-dihydrouridine synthase
YP_004294763.1	PFAM: Helix-turn-helix, Fis-type; KEGG: nmu:Nmul_A0132 fis family transcriptional regulator
YP_004294764.1	SMART: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; TIGRFAM: AICARFT/IMPCHase bienzyme; KEGG: nmu:Nmul_A0133 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain
YP_004294765.1	TIGRFAM: Phosphoribosylglycinamide synthetase; KEGG: neu:NE0877 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain
YP_004294766.1	KEGG: amr:AM1_6172 IS5 family transposase
YP_004294767.1	KEGG: nmu:Nmul_A1330 flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_004294768.1	KEGG: net:Neut_0343 flagellar rod assembly protein/muramidase FlgJ; TIGRFAM: Flagellar protein FlgJ type-2; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ, N-terminal
YP_004294769.1	PFAM: Flagellar P-ring protein; KEGG: neu:NE0309 flagellar basal body P-ring protein
YP_004294770.1	PFAM: Flagellar L-ring protein; KEGG: net:Neut_0341 flagellar basal body L-ring protein
YP_004294771.1	KEGG: nmu:Nmul_A1326 hypothetical protein; TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_004294772.1	KEGG: neu:NE0306 flagellar basal body rod protein FlgF; TIGRFAM: Flagellar basal-body rod FlgF; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_004294773.1	KEGG: net:Neut_0338 flagellar hook protein FlgE; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body FlaE; Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_004294774.1	PFAM: Flagellar hook capping protein; KEGG: neu:NE0304 flagellar basal body rod modification protein
YP_004294775.1	manually curated; TIGRFAM: Flagellar basal-body rod protein FlgC; KEGG: net:Neut_0336 flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_004294776.1	KEGG: ppr:PBPRB1378 hypothetical protein
YP_004294777.1	KEGG: slt:Slit_0565 flagellar basal-body rod protein FlgB; TIGRFAM: Flagellar basal-body rod protein FlgB; PFAM: Flagellar basal body rod protein, N-terminal
YP_004294778.1	TIGRFAM: Flagella basal body P-ring formation protein FlgA; PFAM: SAF domain; KEGG: net:Neut_0334 flagellar basal body P-ring biosynthesis protein FlgA; SMART: SAF domain
YP_004294779.1	KEGG: nmu:Nmul_A0275 hypothetical protein
YP_004294780.1	PFAM: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3; KEGG: net:Neut_0867 hypothetical protein
YP_004294781.1	PFAM: Protein of unknown function DUF2130; KEGG: rfr:Rfer_0075 hypothetical protein
YP_004294782.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; Signal transduction response regulator, receiver domain; Diguanylate cyclase, predicted; KEGG: cvi:CV_3260 hypothetical protein; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif; Signal transduction response regulator, receiver domain
YP_004294783.1	TIGRFAM: PAS; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain; PAS fold; ATPase-like, ATP-binding domain; KEGG: cvi:CV_3259 sensory transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; PAS; PAC motif
YP_004294784.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: nmu:Nmul_A1047 biopolymer transport protein ExbD/TolR
YP_004294785.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: nmu:Nmul_A1048 MotA/TolQ/ExbB proton channel
YP_004294786.1	KEGG: nmu:Nmul_A1049 TonB-like; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal
YP_004294787.1	PFAM: RDD; KEGG: net:Neut_0589 RDD domain-containing protein
YP_004294788.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dat:HRM2_39450 GGDEF domain family protein; SMART: Diguanylate cyclase, predicted
YP_004294789.1	KEGG: net:Neut_2488 cell divisionFtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase FtsK gamma; SMART: DNA translocase FtsK gamma; ATPase, AAA+ type, core
YP_004294790.1	KEGG: neu:NE1052 outer membrane lipoprotein carrier protein LolA; TIGRFAM: Outer membrane lipoprotein carrier protein LolA, Proteobacteria; PFAM: Outer membrane lipoprotein carrier protein LolA
YP_004294791.1	KEGG: nmu:Nmul_A0179 recombination factor protein RarA; PFAM: MgsA AAA+ ATPase C-terminal; ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core
YP_004294792.1	TIGRFAM: Seryl-tRNA synthetase, class IIa; KEGG: neu:NE0180 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal
YP_004294793.1	KEGG: neu:NE0179 hypothetical protein
YP_004294794.1	PFAM: Putative exonuclease, RdgC; KEGG: mei:Msip34_2737 putative exonuclease RdgC
YP_004294795.1	KEGG: net:Neut_2161 hypothetical protein
YP_004294796.1	KEGG: har:HEAR3018 putative polyribonucleotide nucleotidyltransferase; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA-binding domain; SMART: Resolvase, RNase H-like fold; RNA-binding domain, S1; Helix-hairpin-helix DNA-binding motif, class 1
YP_004294797.1	KEGG: cpi:Cpin_0412 ribonuclease BN; TIGRFAM: Ribonuclease BN; PFAM: Ribonuclease BN-related
YP_004294798.1	PFAM: Integrase, catalytic core; KEGG: net:Neut_1814 integrase catalytic subunit
YP_004294799.1	KEGG: net:Neut_2357 transport-associated; PFAM: Transport-associated; SMART: Transport-associated and nodulation domain, bacteria
YP_004294800.1	SMART: Cyclic nucleotide-binding domain; KEGG: vap:Vapar_5993 transcriptional regulator, Crp/Fnr family
YP_004294801.1	KEGG: neu:NE0894 hypothetical protein
YP_004294802.1	PFAM: Transposase IS3/IS911family; KEGG: net:Neut_1813 transposase IS3/IS911 family protein
YP_004294803.1	KEGG: meh:M301_1744 hypothetical protein
YP_004294804.1	KEGG: hna:Hneap_1227 integrase catalytic region
YP_004294806.1	KEGG: neu:NE0998 hypothetical protein
YP_004294807.1	PFAM: Divalent ion symporter; Regulator of K+ conductance, C-terminal; KEGG: ttu:TERTU_0455 TrkA-C domain protein
YP_004294808.1	PFAM: Protein of unknown function DUF3617; KEGG: net:Neut_2093 hypothetical protein
YP_004294809.1	TIGRFAM: Dihydrolipoamide succinyltransferase; KEGG: net:Neut_0859 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding
YP_004294810.1	SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; KEGG: neu:NE2374 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component
YP_004294811.1	KEGG: nmu:Nmul_A0858 citrate synthase I; TIGRFAM: Citrate synthase, type II; PFAM: Citrate synthase-like
YP_004294812.1	PFAM: Protein of unknown function DUF339; KEGG: neu:NE2372 hypothetical protein
YP_004294813.1	KEGG: neu:NE2371 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein
YP_004294814.1	KEGG: vex:VEA_004335 hypothetical protein
YP_004294815.1	KEGG: eba:ebA2728 curved DNA-binding protein; PFAM: Heat shock protein DnaJ, N-terminal; Chaperone DnaJ, C-terminal; SMART: Heat shock protein DnaJ, N-terminal
YP_004294816.1	KEGG: csa:Csal_1427 MerR family transcriptional regulator
YP_004294817.1	TIGRFAM: Thioredoxin; KEGG: slt:Slit_2205 thioredoxin; PFAM: Thioredoxin domain
YP_004294818.1	KEGG: sat:SYN_02023 endopeptidase; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF
YP_004294819.1	PFAM: Protein of unknown function DUF490; KEGG: net:Neut_1408 hypothetical protein
YP_004294820.1	PFAM: Bacterial surface antigen (D15); Surface antigen variable number; KEGG: net:Neut_1409 surface antigen (D15)
YP_004294821.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: neu:NE1170 putative dihydroflavonol-4-reductase
YP_004294822.1	PFAM: Ketopantoate reductase ApbA/PanE, C-terminal; Ketopantoate reductase ApbA/PanE, N-terminal; KEGG: vdi:Vdis_0590 2-dehydropantoate 2-reductase
YP_004294823.1	KEGG: mca:MCA0084 hypothetical protein
YP_004294824.1	KEGG: noc:Noc_2135 hypothetical protein
YP_004294825.1	PFAM: Transposase, mutator type; KEGG: xcv:XCVc0009 transposase mutator family protein
YP_004294826.1	KEGG: nmu:Nmul_A2657 DEAD/DEAH box helicase-like; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004294827.1	PFAM: NapC/NirT cytochrome c, N-terminal; KEGG: neu:NE2336 putative tetraheme C-cytochrome
YP_004294828.1	KEGG: neu:NE2337 cytochrome c-554 precursor
YP_004294829.1	KEGG: nmu:Nmul_A2661 hypothetical protein
YP_004294830.1	KEGG: neu:NE2339 hydroxylamine oxidoreductase
YP_004294831.1	KEGG: nmu:Nmul_A1037 ribosomal protein S20; TIGRFAM: Ribosomal protein S20; PFAM: Ribosomal protein S20
YP_004294832.1	KEGG: net:Neut_0690 hypothetical protein
YP_004294833.1	KEGG: nwa:Nwat_1109 hypothetical protein
YP_004294834.1	KEGG: nhl:Nhal_2587 hypothetical protein
YP_004294835.1	KEGG: neu:NE2376 hypothetical protein
YP_004294836.1	PFAM: Amidohydrolase 1; KEGG: net:Neut_1692 amidohydrolase
YP_004294837.1	KEGG: nwa:Nwat_1114 hypothetical protein
YP_004294838.1	KEGG: ere:EUBREC_3682 hypothetical ABC transporter extracellular binding protein
YP_004294839.1	KEGG: nmu:Nmul_A2421 DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC
YP_004294840.1	PFAM: Inorganic polyphosphate/ATP-NAD kinase, predicted; KEGG: net:Neut_0768 NAD(+)/NADH kinase family protein
YP_004294841.1	KEGG: neu:NE1477 heat-inducible transcription repressor; TIGRFAM: Winged helix-turn-helix transcription repressor, HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA, C-terminal; Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain
YP_004294842.1	TIGRFAM: Ferrochelatase; KEGG: nmu:Nmul_A2424 ferrochelatase; PFAM: Ferrochelatase
YP_004294843.1	KEGG: nhl:Nhal_1232 hypothetical protein
YP_004294844.1	KEGG: pbe:PB000079.01.0 Plasmodium falciparum asparagine-rich protein
YP_004294845.1	KEGG: mca:MCA1082 hypothetical protein
YP_004294846.1	KEGG: fps:FP1731 esterase/lipase/thioesterase family protein
YP_004294847.1	PFAM: Transposase, IS4-like; KEGG: atu:Atu4436 IS5 family transposase
YP_004294848.1	TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG: tgr:Tgr7_1549 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase
YP_004294849.1	TIGRFAM: UDP-glucose 4-epimerase; KEGG: nmu:Nmul_A0260 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase
YP_004294850.1	KEGG: nmu:Nmul_A0913 hypothetical protein
YP_004294851.1	TIGRFAM: Sulphate adenylyltransferase, large subunit; Adenylylsulphate kinase, C-terminal; KEGG: tmz:Tmz1t_1398 sulfate adenylyltransferase, large subunit; PFAM: Adenylylsulphate kinase, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2
YP_004294852.1	TIGRFAM: Sulphate adenylyltransferase, small subunit; KEGG: pzu:PHZ_c2263 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase
YP_004294854.1	KEGG: mfa:Mfla_0577 putative monovalent cation/H+ antiporter subunit G; TIGRFAM: Na+/H+ antiporter subunit; PFAM: Na+/H+ antiporter subunit
YP_004294855.1	PFAM: Multiple resistance and pH regulation protein F; KEGG: alv:Alvin_3105 multiple resistance and pH regulation protein F
YP_004294856.1	PFAM: cation antiporter; KEGG: alv:Alvin_3104 cation antiporter
YP_004294857.1	KEGG: tbd:Tbd_0495 putative monovalent cation/H+ antiporter subunit D; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase
YP_004294858.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L/K; KEGG: tbd:Tbd_0496 putative monovalent cation/H+ antiporter subunit C
YP_004294859.1	KEGG: alv:Alvin_3101 NADH/ubiquinone/plastoquinone (complex I); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; Na+/H+ antiporter MnhB subunit-related protein; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal
YP_004294861.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; 7TM-DISM receptor, extracellular domain, type 2; 7TM-DISM receptor, extracellular domain, type 1; KEGG: sse:Ssed_0845 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004294862.1	KEGG: sad:SAAV_1201 putative glycerol-3-phosphate acyltransferase PlsX
YP_004294863.1	KEGG: bur:Bcep18194_B1388 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase
YP_004294864.1	PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase
YP_004294865.1	KEGG: neu:NE0007 hypothetical protein
YP_004294866.1	PFAM: Peptidase M48; KEGG: net:Neut_1535 heat shock protein HtpX
YP_004294867.1	PFAM: Septum formation initiator; KEGG: slt:Slit_1883 septum formation initiator
YP_004294868.1	TIGRFAM: Enolase; KEGG: nmu:Nmul_A1228 phosphopyruvate hydratase; PFAM: Enolase, C-terminal; Enolase, N-terminal
YP_004294869.1	TIGRFAM: CTP synthase; KEGG: nmu:Nmul_A1227 CTP synthetase; PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal
YP_004294870.1	PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: nmu:Nmul_A2329 fructosamine kinase
YP_004294871.1	TIGRFAM: Argininosuccinate lyase; KEGG: nmu:Nmul_A2328 argininosuccinate lyase; PFAM: Lyase 1, N-terminal
YP_004294872.1	KEGG: net:Neut_1268 hypothetical protein
YP_004294873.1	TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: nmu:Nmul_A0886 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: Enolpyruvate transferase domain
YP_004294874.1	KEGG: neu:NE1851 hypothetical protein; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP
YP_004294875.1	TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; Helicase, C-terminal; KEGG: nmu:Nmul_A0884 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004294876.1	KEGG: smm:Smp_075140 hypothetical protein
YP_004294877.1	PFAM: Transposase IS3/IS911family; KEGG: rms:RMA_0745 transposase
YP_004294879.1	KEGG: maq:Maqu_0075 hypothetical protein
YP_004294880.1	KEGG: pic:PICST_49245 hypothetical protein
YP_004294881.1	KEGG: pcu:pc0902 hypothetical protein
YP_004294882.1	PFAM: Protein of unknown function DUF3422; KEGG: pna:Pnap_2555 hypothetical protein
YP_004294883.1	TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; KEGG: nmu:Nmul_A2364 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III
YP_004294884.1	KEGG: neu:NE0025 metallo-beta-lactamase superfamily protein; PFAM: Beta-Casp domain; RNA-metabolising metallo-beta-lactamase; Beta-lactamase-like; SMART: Beta-lactamase-like
YP_004294885.1	PFAM: Transposase, IS4-like; KEGG: mno:Mnod_5003 transposase IS4 family protein
YP_004294886.1	PFAM: Transposase (putative), IS66 Orf2-like; KEGG: eba:ebB55 transposase, fragment
YP_004294887.1	PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase
YP_004294888.1	KEGG: pyo:PY01157 dentin phosphoryn
YP_004294889.1	KEGG: mei:Msip34_2442 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial
YP_004294890.1	KEGG: amr:AM1_6172 IS5 family transposase
YP_004294891.1	KEGG: mae:Maeo_0822 hypothetical protein
YP_004294892.1	KEGG: rsc:RCFBP_11249 hypothetical protein
YP_004294893.1	PFAM: Mechanosensitive ion channel MscS; Transport-associated; KEGG: mct:MCR_0648 mechanosensitive ion channel family protein MscS
YP_004294894.1	KEGG: nhl:Nhal_1698 hypothetical protein
YP_004294895.1	PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase
YP_004294896.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: dat:HRM2_00760 hypothetical protein
YP_004294897.1	PFAM: Transposase IS200-like; KEGG: plu:plu4843 IS200 family transposase
YP_004294898.1	PFAM: Protein of unknown function DUF883, ElaB; KEGG: net:Neut_2354 hypothetical protein
YP_004294899.1	PFAM: Protein of unknown function DUF883, ElaB; KEGG: net:Neut_2354 hypothetical protein
YP_004294900.1	KEGG: rpb:RPB_0803 5'-nucleotidase
YP_004294901.1	PFAM: Transposase IS3/IS911family; KEGG: net:Neut_1813 transposase IS3/IS911 family protein
YP_004294902.1	KEGG: meh:M301_0983 phospholipase D/transphosphatidylase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase
YP_004294903.1	KEGG: hoh:Hoch_5517 hypothetical protein
YP_004294905.1	PFAM: Uncharacterised protein family, zinc metallopeptidase putative; KEGG: gme:Gmet_2726 hypothetical protein
YP_004294906.1	PFAM: Protein of unknown function DUF3465; KEGG: neu:NE2443 hypothetical protein
YP_004294907.1	KEGG: ckr:CKR_2465 hypothetical protein
YP_004294908.1	KEGG: gym:GYMC10_3357 protein of unknown function DUF1232
YP_004294909.1	KEGG: dar:Daro_3555 chromate transporter; TIGRFAM: Chromate transporter, long chain; PFAM: Chromate transporter
YP_004294910.1	KEGG: net:Neut_1951 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase
YP_004294911.1	PFAM: Glycine cleavage system P-protein, N-terminal; KEGG: nmu:Nmul_A0210 glycine dehydrogenase subunit 2
YP_004294912.1	PFAM: Redoxin; KEGG: nmu:Nmul_A0211 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_004294913.1	KEGG: neu:NE0609 glycine dehydrogenase subunit 1; PFAM: Glycine cleavage system P-protein, N-terminal
YP_004294914.1	KEGG: net:Neut_1954 glycine cleavage system protein H; TIGRFAM: Glycine cleavage H-protein, subgroup; PFAM: Glycine cleavage H-protein
YP_004294915.1	PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; TIGRFAM: Glycine cleavage system T protein; HAMAP: Aminomethyltransferase; KEGG: nmu:Nmul_A0214 glycine cleavage system aminomethyltransferase T
YP_004294916.1	KEGG: tet:TTHERM_00441910 hypothetical protein
YP_004294917.1	PFAM: Copper resistance D; Cytochrome c, class I; KEGG: nmu:Nmul_A2760 cytochrome c, class I
YP_004294918.1	KEGG: mei:Msip34_2654 transport-associated; PFAM: Transport-associated; SMART: Transport-associated and nodulation domain, bacteria
YP_004294919.1	KEGG: net:Neut_1326 hypothetical protein
YP_004294920.1	KEGG: tvo:TVN0219 multidrug efflux permease
YP_004294921.1	PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: nmu:Nmul_A0954 hypothetical protein
YP_004294922.1	PFAM: Phosphate-selective porin O/P; KEGG: nmu:Nmul_A1267 phosphate-selective porin O and P
YP_004294923.1	PFAM: Glutathione peroxidase; KEGG: alv:Alvin_2032 peroxiredoxin
YP_004294924.1	KEGG: nmu:Nmul_A1303 hypothetical protein
YP_004294925.1	PFAM: Peptidase C13, legumain; KEGG: app:CAP2UW1_3877 peptidase C13, legumain asparaginyl peptidase
YP_004294926.1	KEGG: rfr:Rfer_0364 response regulator receiver modulated CheW protein; PFAM: CheW-like protein; Signal transduction response regulator, receiver domain; SMART: CheW-like protein; Signal transduction response regulator, receiver domain
YP_004294927.1	KEGG: neu:NE0900 hypothetical protein
YP_004294928.1	KEGG: nmu:Nmul_A1969 hypothetical protein
YP_004294929.1	KEGG: nmu:Nmul_A1968 hypothetical protein
YP_004294930.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nmu:Nmul_A1967 TetR family transcriptional regulator
YP_004294931.1	KEGG: ttu:TERTU_3998 hypothetical protein
YP_004294932.1	KEGG: swp:swp_4487 hypothetical protein
YP_004294933.1	KEGG: tcr:511827.20 hypothetical protein
YP_004294934.1	KEGG: nmu:Nmul_A1555 response regulator receiver/diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; Signal transduction response regulator, receiver domain; SMART: Diguanylate phosphodiesterase, EAL domain; Signal transduction response regulator, receiver domain
YP_004294935.1	KEGG: nmr:Nmar_1133 kelch repeat-containing protein; PFAM: Kelch repeat type 1; SMART: Kelch repeat type 1
YP_004294936.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: sun:SUN_0937 acetyltransferase
YP_004294937.1	PFAM: Invasion gene expression up-regulator, SirB; KEGG: nmu:Nmul_A2077 invasion gene expression up-regulator, SirB
YP_004294938.1	KEGG: nmu:Nmul_A2076 hypothetical protein
YP_004294939.1	PFAM: Protein of unknown function DUF3478; KEGG: net:Neut_1678 hypothetical protein
YP_004294940.1	PFAM: Drug/metabolite transporter; KEGG: net:Neut_1679 hypothetical protein
YP_004294941.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: neu:NE1503 Rieske iron-sulfur protein 2Fe-2S subunit
YP_004294942.1	KEGG: nmu:Nmul_A1578 hypothetical protein
YP_004294943.1	TIGRFAM: Primosomal protein n; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: nmu:Nmul_A2327 primosomal protein N'; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004294944.1	KEGG: pyo:PY00634 hypothetical protein
YP_004294945.1	KEGG: nmu:Nmul_A0727 putative signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain
YP_004294946.1	KEGG: nmu:Nmul_A0728 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal
YP_004294947.1	KEGG: nmu:Nmul_A0729 hypothetical protein
YP_004294948.1	PFAM: Protein of unknown function DUF1597; KEGG: nmu:Nmul_A0439 hypothetical protein
YP_004294949.1	KEGG: nmu:Nmul_A1630 hypothetical protein
YP_004294950.1	PFAM: Protein of unknown function DUF1597; KEGG: nmu:Nmul_A0439 hypothetical protein
YP_004294951.1	KEGG: nmu:Nmul_A1564 hypothetical protein
YP_004294952.1	KEGG: net:Neut_1339 DNA mismatch repair protein MutS domain-containing protein; PFAM: DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal
YP_004294953.1	KEGG: nmu:Nmul_A0950 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004294954.1	PFAM: ABC transporter-like; KEGG: nmu:Nmul_A0951 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004294955.1	PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: nmu:Nmul_A0953 hypothetical protein
YP_004294956.1	PFAM: Transposase IS200-like; KEGG: pin:Ping_3671 transposase IS200-family protein
YP_004294957.1	KEGG: spu:591175 similar to DiGeorge syndrome critical region gene 8
YP_004294958.1	KEGG: pla:Plav_0800 hypothetical protein
YP_004294959.1	KEGG: rce:RC1_3866 sulfate ABC transporter, permease protein CysW
YP_004294960.1	KEGG: bpb:bpr_I1143 hypothetical protein
YP_004294961.1	KEGG: pif:PITG_06149 hypothetical protein
YP_004294962.1	KEGG: syf:Synpcc7942_0280 competence damage-inducible protein A
YP_004294963.1	KEGG: meh:M301_1151 hypothetical protein
YP_004294964.1	PFAM: ParB-like nuclease; KEGG: sus:Acid_1672 hypothetical protein
YP_004294965.1	KEGG: rpf:Rpic12D_3450 hypothetical protein
YP_004294966.1	KEGG: ajs:Ajs_3336 hypothetical protein
YP_004294967.1	KEGG: pmx:PERMA_1975 DNA topoisomerase I
YP_004294968.1	KEGG: spu:589410 hypothetical LOC589410
YP_004294969.1	KEGG: ajs:Ajs_3338 hypothetical protein
YP_004294970.1	PFAM: Protein of unknown function DUF497; KEGG: bbr:BB1689 hypothetical protein
YP_004294971.1	PFAM: Integrase, catalytic core, phage; KEGG: har:HEAR3023 CP4-6 prophage; phage integrase
YP_004294972.1	PFAM: Integrase, catalytic core; Resolvase, helix-turn-helix domain; KEGG: pst:PSPTO_B0040 ISPsy4, transposase
YP_004294973.1	KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004294974.1	KEGG: cph:Cpha266_1072 GCN5-related N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase (GNAT) domain
YP_004294975.1	PFAM: High potential iron-sulphur protein; KEGG: tin:Tint_1104 hypothetical protein
YP_004294976.1	KEGG: hel:HELO_1487 exodeoxyribonuclease V, beta subunit
YP_004294978.1	KEGG: ecb:100062488 phosphoribosylformylglycinamidine synthase
YP_004294979.1	TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: rme:Rmet_3328 ATP-dependent DNA helicase RecQ; SMART: RQC domain; DEAD-like helicase, N-terminal; Helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain
YP_004294980.1	TIGRFAM: Glutamine synthetase type I; KEGG: nmu:Nmul_A2288 glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp
YP_004294981.1	KEGG: cvi:CV_3590 hypothetical protein
YP_004294982.1	KEGG: mms:mma_1079 hypothetical protein
YP_004294983.1	TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: neu:NE0023 exodeoxyribonuclease III:exodeoxyribonuclease III xth; PFAM: Endonuclease/exonuclease/phosphatase
YP_004294984.1	KEGG: nmu:Nmul_A1412 helicase C2; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal
YP_004294985.1	PFAM: Uncharacterised protein family UPF0125; KEGG: nmu:Nmul_A1201 hypothetical protein
YP_004294986.1	PFAM: Streptomyces cyclase/dehydrase; KEGG: nmu:Nmul_A1202 cyclase/dehydrase
YP_004294987.1	KEGG: nmu:Nmul_A1203 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SsrA-binding protein
YP_004294988.1	KEGG: nmu:Nmul_A1204 cytochrome oxidase assembly; HAMAP: Heme A synthase/Protoheme IX farnesyltransferase; PFAM: Heme A synthase/Protoheme IX farnesyltransferase
YP_004294989.1	TIGRFAM: Thiolase; KEGG: neu:NE1527 acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal
YP_004294990.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG: nmu:Nmul_A0097 3-hydroxyacyl-CoA dehydrogenase, NAD-binding
YP_004294991.1	KEGG: bmq:BMQ_5004 hypothetical protein; TIGRFAM: Transcriptional regulator Spx/MgsR; PFAM: Arsenate reductase-like
YP_004294992.1	PFAM: Cupin 2, conserved barrel; KEGG: cyn:Cyan7425_0091 cupin 2 conserved barrel domain protein
YP_004294993.1	KEGG: mlo:mlr9349 hypothetical protein
YP_004294994.1	PFAM: Alpha/beta hydrolase, N-terminal; KEGG: dac:Daci_6038 alpha/beta hydrolase fold protein
YP_004294995.1	KEGG: cch:Cag_0738 VCBS
YP_004294996.1	KEGG: cyj:Cyan7822_6760 outer membrane adhesin like proteiin
YP_004294997.1	TIGRFAM: Conserved hypothetical protein CHP03032; KEGG: cch:Cag_0733 hypothetical protein
YP_004294998.1	KEGG: neu:NE2386 SH3 domain-containing protein; PFAM: SH3, type 3; SMART: SH3-like domain, bacterial
YP_004294999.1	TIGRFAM: Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: nmu:Nmul_A0861 succinate dehydrogenase, flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal
YP_004295000.1	KEGG: nmu:Nmul_A0862 succinate dehydrogenase, cytochrome b subunit; TIGRFAM: Succinate dehydrogenase, hydrophobic membrane anchor; PFAM: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit
YP_004295001.1	KEGG: nmu:Nmul_A0863 succinate dehydrogenase, cytochrome b subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit
YP_004295002.1	KEGG: mpt:Mpe_A0556 putative lipoprotein
YP_004295003.1	PFAM: Haemolysin-type calcium-binding repeat; FG-GAP; KEGG: syf:Synpcc7942_1337 integrins alpha chain
YP_004295004.1	TIGRFAM: Succinyldiaminopimelate transaminase, beta/gammaproteobacteria; KEGG: nmu:Nmul_A1850 succinyldiaminopimelate transaminase; PFAM: Aminotransferase, class I/classII
YP_004295005.1	KEGG: neu:NE2462 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase
YP_004295006.1	PFAM: Transport-associated; KEGG: nmu:Nmul_A0093 transport-associated protein
YP_004295007.1	TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: neu:NE1976 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase
YP_004295008.1	manually curated; KEGG: neu:NE1977 putative transmembrane protein
YP_004295009.1	KEGG: nmu:Nmul_A2547 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; PFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like
YP_004295010.1	PFAM: Methyltransferase type 11; KEGG: gsu:GSU0630 hypothetical protein
YP_004295011.1	KEGG: cyt:cce_4430 putative sialidase
YP_004295013.1	PFAM: LemA; KEGG: nmu:Nmul_A2119 hypothetical protein
YP_004295014.1	PFAM: Protein of unknown function DUF477; KEGG: nmu:Nmul_A2118 hypothetical protein
YP_004295015.1	PFAM: Protein of unknown function DUF477; KEGG: nmu:Nmul_A2117 hypothetical protein
YP_004295016.1	KEGG: nmu:Nmul_A0679 cytochrome c peroxidase
YP_004295017.1	PFAM: AsmA; KEGG: sml:Smlt3639 putative outer membrane protein assembly protein
YP_004295018.1	PFAM: Transport-associated; KEGG: ypb:YPTS_2195 transport-associated
YP_004295019.1	KEGG: nmu:Nmul_A1511 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03440; PFAM: Sulphatase-modifying factor
YP_004295020.1	KEGG: pha:PSHAa1438 hypothetical protein; TIGRFAM: Methyltransferase-like; PFAM: Protein of unknown function DUF2260
YP_004295021.1	KEGG: pha:PSHAa1437 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03440; PFAM: Sulphatase-modifying factor
YP_004295022.1	KEGG: cgr:CAGL0J01727g hypothetical protein
YP_004295023.1	PFAM: Transport-associated; KEGG: net:Neut_0492 transport-associated
YP_004295024.1	PFAM: Uncharacterised protein family YphA; KEGG: neu:NE1546 hypothetical protein
YP_004295025.1	PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: neu:NE1545 hypothetical protein
YP_004295026.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: neu:NE1544 transcription regulator LysR
YP_004295027.1	KEGG: neu:NE0782 putative periplasmic cell division protein (SufI); PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2
YP_004295028.1	PFAM: Sulfatase; KEGG: phe:Phep_2825 sulfatase
YP_004295029.1	KEGG: kla:KLLA0C15719g hypothetical protein
YP_004295030.1	KEGG: vpa:VP1728 glycine betaine transporter periplasmic subunit
YP_004295031.1	PFAM: Radical SAM; KEGG: maq:Maqu_0146 radical SAM domain-containing protein
YP_004295032.1	KEGG: hch:HCH_02988 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benz oquinol methylase; PFAM: Methyltransferase type 11
YP_004295033.1	PFAM: Glycosyl transferase, family 2; KEGG: glo:Glov_1990 glycosyl transferase family 2
YP_004295034.1	PFAM: Protein of unknown function DUF2064; KEGG: hch:HCH_04839 hypothetical protein
YP_004295035.1	PFAM: Carbonic anhydrase, cadmium-binding; KEGG: dar:Daro_2933 histidine kinase, HAMP region: chemotaxis sensory transducer
YP_004295036.1	PFAM: NUDIX hydrolase domain; KEGG: neu:NE2253 dATP pyrophosphohydrolase
YP_004295037.1	TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; KEGG: nmu:Nmul_A0603 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain
YP_004295038.1	TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative; KEGG: neu:NE2251 type I antifreeze protein; SMART: Regulatory protein, FmdB, putative
YP_004295039.1	KEGG: nmu:Nmul_A0875 aconitate hydratase; TIGRFAM: Aconitase/iron regulatory protein 2; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel
YP_004295040.1	KEGG: nhl:Nhal_1339 hypothetical protein
YP_004295041.1	KEGG: rpi:Rpic_3180 hypothetical protein
YP_004295042.1	PFAM: Prophage CP4-57 regulatory; KEGG: vcj:VCD_002586 transcriptional regulator
YP_004295043.1	KEGG: ade:Adeh_1839 hypothetical protein
YP_004295044.1	PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase
YP_004295045.1	KEGG: nmu:Nmul_A2196 hypothetical protein
YP_004295046.1	KEGG: ehi:EHI_095860 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide
YP_004295047.1	KEGG: ptm:GSPATT00013152001 hypothetical protein
YP_004295048.1	PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit
YP_004295049.1	PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein
YP_004295050.1	KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004295051.1	KEGG: zpr:ZPR_2153 putative outer membrane protein, probably involved in nutrient binding
YP_004295052.1	PFAM: Integrase, catalytic core, phage; KEGG: apb:SAR116_2486 phage integrase family protein
YP_004295053.1	TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; KEGG: nmu:Nmul_A1199 GMP synthase; PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; NAD/GMP synthase
YP_004295054.1	SMART: Cystathionine beta-synthase, core; TIGRFAM: IMP dehydrogenase; KEGG: nmu:Nmul_A1200 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core
YP_004295055.1	KEGG: slt:Slit_1463 hypothetical protein
YP_004295056.1	KEGG: aeh:Mlg_1232 hypothetical protein
YP_004295057.1	PFAM: WD40-like Beta Propeller; KEGG: net:Neut_1380 WD40 domain-containing protein
YP_004295058.1	KEGG: nhl:Nhal_4025 hypothetical protein
YP_004295059.1	KEGG: nhl:Nhal_4024 helicase domain protein; PFAM: Helicase, C-terminal; SNF2-related; SMART: Helicase, C-terminal; DEAD-like helicase, N-terminal
YP_004295060.1	KEGG: net:Neut_1379 peptidase M28; PFAM: Peptidase M28; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF
YP_004295061.1	KEGG: spc:Sputcn32_3987 hypothetical protein
YP_004295062.1	KEGG: bge:BC1002_4939 peroxidase; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal
YP_004295063.1	KEGG: cja:CJA_3561 putative lipoprotein
YP_004295064.1	KEGG: slo:Shew_3054 hypothetical protein
YP_004295065.1	KEGG: pde:Pden_0560 hemolysin-type calcium-binding region
YP_004295066.1	KEGG: pnu:Pnuc_1664 GCN5-related N-acetyltransferase
YP_004295068.1	TIGRFAM: Carbamoyl-phosphate synthase, small subunit; KEGG: nmu:Nmul_A0478 carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal
YP_004295069.1	SMART: Methylglyoxal synthase-like domain; TIGRFAM: Carbamoyl-phosphate synthase, large subunit; KEGG: nmu:Nmul_A0479 carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthetase, large subunit, oligomerisation; Methylglyoxal synthase-like domain; Carbamoyl-phosphate synthase, large subunit, N-terminal
YP_004295070.1	KEGG: neu:NE1660 transcription elongation factor GreA/GreB; TIGRFAM: Transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB, N-terminal; Transcription elongation factor, GreA/GreB, C-terminal
YP_004295071.1	PFAM: RNA-binding, CRM domain; KEGG: hse:Hsero_1381 RNA-binding ribosomal protein
YP_004295072.1	PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: nmu:Nmul_A0482 ribosomal RNA methyltransferase RrmJ/FtsJ
YP_004295073.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: net:Neut_0998 ATP-dependent metalloprotease FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular
YP_004295074.1	PFAM: Pterin-binding; manually curated; KEGG: nmu:Nmul_A0484 dihydropteroate synthase; TIGRFAM: Dihydropteroate synthase
YP_004295075.1	TIGRFAM: Phosphoglucosamine mutase; KEGG: nmu:Nmul_A0485 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal
YP_004295077.1	TIGRFAM: Phosphate binding protein; KEGG: nmu:Nmul_A0486 phosphate binding protein
YP_004295078.1	TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; Sirohaem synthase, N-terminal; KEGG: nmu:Nmul_A2313 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; Sirohaem synthase, dimerisation domain
YP_004295079.1	TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: nmu:Nmul_A1543 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal
YP_004295080.1	PFAM: Protein of unknown function DUF2292; KEGG: mei:Msip34_2148 hypothetical protein
YP_004295081.1	KEGG: nmu:Nmul_A0508 hypothetical protein
YP_004295082.1	KEGG: nmu:Nmul_A0507 thiosulphate-binding protein; TIGRFAM: Thiosulphate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_004295083.1	KEGG: neu:NE0579 domain of unknown function 2; PFAM: Diguanylate phosphodiesterase, EAL domain; SMART: Diguanylate phosphodiesterase, EAL domain
YP_004295084.1	KEGG: nmu:Nmul_A0505 sulfate ABC transporter, permease protein CysT; TIGRFAM: Sulphate ABC transporter, permease protein CysT; Sulphate ABC transporter permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004295085.1	KEGG: nmu:Nmul_A0504 sulfate ABC transporter, permease protein CysW; TIGRFAM: Sulphate ABC transporter, permease protein CysW; Sulphate ABC transporter permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004295086.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Sulphate transport system permease protein 1; KEGG: nmu:Nmul_A0503 sulphate transport system permease protein 1; PFAM: ABC transporter-like
YP_004295087.1	PFAM: Diguanylate phosphodiesterase, EAL domain; KEGG: mca:MCA0898 hypothetical protein
YP_004295088.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: neu:NE0572 transcriptional regulator CysB-like protein
YP_004295089.1	KEGG: nmu:Nmul_A1542 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C
YP_004295090.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; KEGG: gme:Gmet_3085 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted
YP_004295091.1	TIGRFAM: Chaperonin ClpB; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: nmu:Nmul_A1541 ATPase with chaperone activity; SMART: ATPase, AAA+ type, core
YP_004295092.1	KEGG: nmu:Nmul_A1540 dihydrodipicolinate synthase; TIGRFAM: Dihydrodipicolinate synthase subfamily; PFAM: Dihydrodipicolinate synthetase
YP_004295093.1	manually curated; KEGG: neu:NE2404 putative transmembrane protein
YP_004295094.1	KEGG: net:Neut_2150 hypothetical protein
YP_004295095.1	KEGG: nmu:Nmul_A1282 type I secretion outer membrane protein, TolC; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein
YP_004295096.1	KEGG: nmu:Nmul_A1281 type I secretion membrane fusion protein, HlyD; TIGRFAM: Type I secretion membrane fusion protein, HlyD; PFAM: Secretion protein HlyD
YP_004295097.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, type I secretion system, PrtD; KEGG: nmu:Nmul_A1280 type I secretion system ATPase, PrtD; PFAM: ABC transporter-like; ABC transporter, transmembrane domain
YP_004295098.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: axy:AXYL_06298 NAD dependent epimerase/dehydratase family protein 7
YP_004295099.1	PFAM: Glycosyl transferase, family 2; KEGG: nmu:Nmul_A2407 glycosyl transferase family protein
YP_004295100.1	KEGG: vap:Vapar_1531 two component transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain
YP_004295101.1	PFAM: Modulator of Rho-dependent transcription termination; KEGG: neu:NE0186 hypothetical protein
YP_004295102.1	TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form; PFAM: HhH-GPD domain; Helix-hairpin-helix motif; KEGG: neu:NE0056 HhH-GPD; SMART: HhH-GPD domain; Helix-hairpin-helix DNA-binding motif, class 1; Endonuclease III-like, iron-sulphur cluster loop motif
YP_004295103.1	KEGG: nmu:Nmul_A0079 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase
YP_004295104.1	KEGG: nmu:Nmul_A0080 aromatic acid decarboxylase; TIGRFAM: Phenylacrylic acid decarboxylase; PFAM: Flavoprotein
YP_004295105.1	PFAM: Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, C-terminal; Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, N-terminal; KEGG: nmu:Nmul_A0082 HPr kinase/phosphorylase
YP_004295106.1	PFAM: Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; KEGG: neu:NE0060 phosphotransferase system mannitol/fructose-specific IIA domain-containing protein
YP_004295107.1	KEGG: neu:NE0061 sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein
YP_004295108.1	KEGG: nmu:Nmul_A0084 sigma-54 (RpoN); TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54; RNA polymerase sigma factor 54, core-binding
YP_004295109.1	PFAM: ABC transporter-like; KEGG: net:Neut_2302 ABC transporter-related protein; SMART: ATPase, AAA+ type, core
YP_004295110.1	KEGG: net:Neut_2301 OstA family protein; TIGRFAM: Lipopolysccharide assembly, LptA; PFAM: Organic solvent tolerance-like, N-terminal
YP_004295111.1	PFAM: Lipopolysccharide assembly, LptC-related; KEGG: net:Neut_2300 hypothetical protein
YP_004295112.1	TIGRFAM: Quinolinate synthetase A; KEGG: net:Neut_2299 quinolinate synthetase; PFAM: Quinolinate synthetase A
YP_004295113.1	SMART: Phospholipase D/Transphosphatidylase; KEGG: neu:NE0068 phospholipase D/transphosphatidylase
YP_004295114.1	KEGG: nmu:Nmul_A0607 SUA5/YciO/YrdC/YwlC; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; SUA5
YP_004295115.1	KEGG: nmu:Nmul_A0608 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase
YP_004295116.1	KEGG: neu:NE2461 hypothetical protein
YP_004295117.1	KEGG: nmu:Nmul_A0497 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_004295118.1	PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; HAMAP: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: net:Neut_2323 protein-L-isoaspartate O-methyltransferase
YP_004295119.1	TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; KEGG: nmu:Nmul_A0495 stationary phase survival protein SurE; PFAM: Survival protein SurE-like phosphatase/nucleotidase
YP_004295120.1	KEGG: reu:Reut_A1282 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR
YP_004295121.1	TIGRFAM: Integration host factor, alpha subunit; PFAM: Histone-like bacterial DNA-binding protein; KEGG: nmu:Nmul_A0493 integration host factor subunit alpha; SMART: Histone-like bacterial DNA-binding protein
YP_004295122.1	TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: nmu:Nmul_A0492 phenylalanyl-tRNA synthetase subunit beta
YP_004295123.1	KEGG: nmu:Nmul_A0491 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase; Phenylalanyl-tRNA synthetase, class II, N-terminal
YP_004295124.1	KEGG: nmu:Nmul_A0490 50S ribosomal protein L20; TIGRFAM: Ribosomal protein L20; PFAM: Ribosomal protein L20
YP_004295125.1	PFAM: Ribosomal protein L35; manually curated; TIGRFAM: Ribosomal protein L35, non-mitochondrial; KEGG: eba:ebC8 50S ribosomal protein L35; HAMAP: Ribosomal protein L35, non-mitochondrial
YP_004295126.1	TIGRFAM: Translation initiation factor 3; HAMAP: Translation initiation factor 3; KEGG: nmu:Nmul_A0488 translation initiation factor IF-3; PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal
YP_004295127.1	TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; KEGG: nmu:Nmul_A0487 threonyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase, SAD
YP_004295128.1	KEGG: nmu:Nmul_A2658 hypothetical protein
YP_004295129.1	PFAM: NapC/NirT cytochrome c, N-terminal; KEGG: neu:NE2336 putative tetraheme C-cytochrome
YP_004295130.1	KEGG: neu:NE2337 cytochrome c-554 precursor
YP_004295131.1	KEGG: nmu:Nmul_A2661 hypothetical protein
YP_004295132.1	KEGG: neu:NE2339 hydroxylamine oxidoreductase
YP_004295133.1	TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 3; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 4; KEGG: nmu:Nmul_A0760 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase, N-terminal
YP_004295134.1	KEGG: nmu:Nmul_A0759 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 2; RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 7; RNA polymerase, beta subunit, protrusion; DNA-directed RNA polymerase, beta subunit, external 1 domain
YP_004295135.1	KEGG: nmu:Nmul_A0758 50S ribosomal protein L7/L12; TIGRFAM: Ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal
YP_004295136.1	KEGG: nmu:Nmul_A0757 50S ribosomal protein L10; HAMAP: Ribosomal protein L10; PFAM: Ribosomal protein L10/acidic P0
YP_004295137.1	KEGG: nmu:Nmul_A0756 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1
YP_004295138.1	TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, N-terminal domain; Ribosomal protein L11, C-terminal domain; KEGG: net:Neut_1799 50S ribosomal protein L11; SMART: Ribosomal protein L11
YP_004295139.1	TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KEGG: nmu:Nmul_A0754 transcription antitermination protein NusG; SMART: Transcription antitermination protein, NusG, N-terminal; KOW
YP_004295140.1	KEGG: nmu:Nmul_A0753 preprotein translocase subunit SecE; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein SecE/Sec61-gamma protein
YP_004295141.1	KEGG: neu:NE2052 elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal
YP_004295142.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: net:Neut_1443 binding-protein-dependent transport systems inner membrane component
YP_004295143.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: nmu:Nmul_A2334 extracellular solute-binding protein
YP_004295144.1	KEGG: neu:NE2205 short-chain dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004295145.1	PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; KEGG: net:Neut_0662 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_004295146.1	KEGG: net:Neut_0661 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein
YP_004295147.1	PFAM: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal; Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal; KEGG: nmu:Nmul_A1126 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
YP_004295148.1	PFAM: Protein of unknown function DUF1058; KEGG: nmu:Nmul_A1125 hypothetical protein
YP_004295149.1	KEGG: net:Neut_0658 preprotein translocase subunit SecB; TIGRFAM: Bacterial protein export chaperone SecB; PFAM: Bacterial protein export chaperone SecB
YP_004295150.1	KEGG: net:Neut_0657 glutaredoxin 3; TIGRFAM: Glutaredoxin, GrxC; PFAM: Glutaredoxin
YP_004295151.1	KEGG: neu:NE2212 putative transmembrane protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_004295152.1	PFAM: Cysteine-rich domain; KEGG: nmu:Nmul_A0175 glycolate oxidase iron-sulfur subunit
YP_004295153.1	PFAM: FAD linked oxidase, N-terminal; KEGG: nmu:Nmul_A0174 glycolate oxidase FAD binding subunit
YP_004295154.1	KEGG: nmu:Nmul_A0173 D-lactate dehydrogenase (cytochrome); PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal
YP_004295155.1	TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: nmu:Nmul_A0172 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding
YP_004295156.1	PFAM: Transposase, IS4-like; KEGG: atu:Atu4436 IS5 family transposase
YP_004295157.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: nmu:Nmul_A0440 GCN5-related N-acetyltransferase
YP_004295158.1	SMART: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; KEGG: nmu:Nmul_A0441 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase
YP_004295159.1	TIGRFAM: Histidyl-tRNA synthetase, class IIa, putative; KEGG: net:Neut_0966 ATP phosphoribosyltransferase regulatory subunit
YP_004295160.1	PFAM: Protein of unknown function DUF2065; KEGG: nmu:Nmul_A0443 hypothetical protein
YP_004295161.1	TIGRFAM: HflC; PFAM: Band 7 protein; KEGG: neu:NE1284 band 7 protein; SMART: Band 7 protein
YP_004295162.1	TIGRFAM: HflK; PFAM: Band 7 protein; Protein HflK, N-terminal; KEGG: nmu:Nmul_A0445 HflK protein; SMART: Band 7 protein
YP_004295163.1	KEGG: neu:NE1286 GTP-binding protein HflX; TIGRFAM: GTP-binding protein, HflX; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related
YP_004295164.1	KEGG: neu:NE1287 RNA-binding protein Hfq; TIGRFAM: Host factor Hfq; PFAM: Like-Sm ribonucleoprotein (LSM) domain
YP_004295165.1	KEGG: neu:NE1315 cytochrome c551 peroxidase; PFAM: Di-haem cytochrome c peroxidase; Cytochrome c, class I
YP_004295166.1	PFAM: NUDIX hydrolase domain; KEGG: nmu:Nmul_A0449 dinucleoside polyphosphate hydrolase
YP_004295167.1	KEGG: net:Neut_1247 prolyl-tRNA synthetase; TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; YbaK/aminoacyl-tRNA synthetase-associated domain; Anticodon-binding
YP_004295168.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: neu:NE1318 SLT domain-containing protein
YP_004295169.1	PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: net:Neut_1245 redoxin domain-containing protein
YP_004295170.1	SMART: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type; KEGG: net:Neut_1244 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
YP_004295171.1	KEGG: net:Neut_1258 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_004295172.1	TIGRFAM: Phosphatidylserine decarboxylase-related protein; KEGG: neu:NE1322 phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase-related
YP_004295173.1	TIGRFAM: Acetohydroxy acid isomeroreductase; KEGG: nmu:Nmul_A0472 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal
YP_004295174.1	manually curated; TIGRFAM: Acetolactate synthase, small subunit; KEGG: nmu:Nmul_A0473 acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT
YP_004295175.1	TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: nmu:Nmul_A0474 acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central domain
YP_004295176.1	PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: nmu:Nmul_A1055 peptidase U62, modulator of DNA gyrase
YP_004295177.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: neu:NE1327 carbon-nitrogen hydrolase
YP_004295178.1	KEGG: ngr:NAEGRDRAFT_45689 hypothetical protein
YP_004295179.1	KEGG: neu:NE1329 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; PFAM: Glutamate-ammonia ligase adenylyltransferase, repeated domain; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase
YP_004295180.1	KEGG: gca:Galf_2551 pilus biogenesis protein TapA precursor, putative
YP_004295181.1	KEGG: net:Neut_2128 putative GAF sensor protein; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; GAF; SMART: GAF; ATPase, AAA+ type, core
YP_004295182.1	KEGG: neu:NE2291 cAMP phosphodiesterase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like
YP_004295183.1	PFAM: UspA; KEGG: net:Neut_2130 UspA domain-containing protein
YP_004295184.1	KEGG: nmu:Nmul_A2473 integral membrane protein TerC; TIGRFAM: Integral membrane protein YjbE; PFAM: Integral membrane protein TerC
YP_004295185.1	PFAM: Patatin/Phospholipase A2-related; KEGG: neu:NE2294 patatin
YP_004295186.1	KEGG: mfa:Mfla_1629 hypothetical protein
YP_004295187.1	KEGG: neu:NE2295 prolyl aminopeptidase; TIGRFAM: Peptidase S33, proline iminopeptidase 1; PFAM: Alpha/beta hydrolase fold-1
YP_004295188.1	KEGG: hch:HCH_04016 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PapS reductase)/FAD synthetase and related enzyme; PFAM: Phosphoadenosine phosphosulphate reductase
YP_004295189.1	KEGG: vcn:VOLCADRAFT_88465 hypothetical protein
YP_004295190.1	PFAM: Protein of unknown function DUF785; KEGG: psp:PSPPH_2054 hypothetical protein
YP_004295191.1	KEGG: net:Neut_1560 transcription elongation factor GreB; TIGRFAM: Transcription elongation factor GreB; PFAM: Transcription elongation factor, GreA/GreB, N-terminal; Transcription elongation factor, GreA/GreB, C-terminal
YP_004295192.1	TIGRFAM: PEP-CTERM anchor; PFAM: von Willebrand factor, type A; PEP-CTERM bacterial; KEGG: rde:RD1_B0031 von Willebrand factor type A domain-containing protein; SMART: von Willebrand factor, type A
YP_004295193.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphate transport system permease protein 1; KEGG: gca:Galf_2284 phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter-like
YP_004295194.1	KEGG: gca:Galf_2283 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004295195.1	KEGG: slt:Slit_1066 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: Phosphate ABC transporter, permease protein PstC; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004295196.1	KEGG: meh:M301_1986 phosphate ABC transporter, periplasmic phosphate-binding protein; TIGRFAM: Periplasmic phosphate binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_004295197.1	KEGG: soz:Spy49_1022 conserved hypothetical protein, possible permease
YP_004295198.1	PFAM: Protein of unknown function DUF839; KEGG: tbd:Tbd_1423 putative phosphatase
YP_004295199.1	KEGG: nhl:Nhal_3832 hypothetical protein
YP_004295200.1	PFAM: Bile acid:sodium symporter; KEGG: nmu:Nmul_A1633 bile acid:sodium symporter
YP_004295201.1	PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region
YP_004295202.1	KEGG: syf:Synpcc7942_1337 integrins alpha chain; PFAM: FG-GAP; Haemolysin-type calcium-binding repeat; SMART: Integrin alpha beta-propellor
YP_004295204.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: nhl:Nhal_3833 TonB-dependent receptor
YP_004295205.1	KEGG: nhl:Nhal_3834 tetratricopeptide domain protein
YP_004295206.1	KEGG: nhl:Nhal_3835 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal
YP_004295207.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: nhl:Nhal_3836 biopolymer transport protein ExbD/TolR
YP_004295208.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: nhl:Nhal_3837 MotA/TolQ/ExbB proton channel
YP_004295209.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: nhl:Nhal_3838 MotA/TolQ/ExbB proton channel
YP_004295210.1	KEGG: nhl:Nhal_3839 hypothetical protein
YP_004295211.1	KEGG: mex:Mext_2992 hypothetical protein
YP_004295212.1	PFAM: Sulphate transporter; KEGG: mei:Msip34_0561 sulphate transporter
YP_004295213.1	PFAM: Protein of unknown function DUF2254, membrane; KEGG: sbl:Sbal_1905 membrane protein
YP_004295214.1	KEGG: neu:NE1199 hypothetical protein
YP_004295215.1	KEGG: nmu:Nmul_A0637 hypothetical protein; PFAM: SH3, type 3; SMART: SH3-like domain, bacterial
YP_004295216.1	SMART: Diguanylate cyclase, predicted; HAMP linker domain; TIGRFAM: Diguanylate cyclase, predicted; KEGG: nmu:Nmul_A0638 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; HAMP linker domain
YP_004295217.1	PFAM: Globin, truncated bacterial-like; KEGG: net:Neut_1441 putative sec-independent protein translocase protein TatC
YP_004295218.1	KEGG: net:Neut_0596 malate dehydrogenase; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; SMART: Malic enzyme, NAD-binding
YP_004295219.1	TIGRFAM: Phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: nmu:Nmul_A0636 phosphoserine phosphatase SerB; PFAM: Haloacid dehalogenase-like hydrolase
YP_004295220.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Metal-dependent hydrolase HDOD; KEGG: neu:NE0440 domain of unknown function, DUF9; SMART: Diguanylate cyclase, predicted
YP_004295221.1	HAMAP: Peptidase, M17, probable cytosol aminopeptidase; KEGG: neu:NE0441 leucyl aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal
YP_004295222.1	PFAM: DNA polymerase III chi subunit, HolC; KEGG: nmu:Nmul_A0745 DNA polymerase III chi subunit, HolC
YP_004295223.1	KEGG: neu:NE0443 hypothetical protein
YP_004295224.1	TIGRFAM: Valyl-tRNA synthetase; KEGG: neu:NE0444 valyl-tRNA synthetase
YP_004295225.1	KEGG: net:Neut_1839 two component transcriptional regulator, LuxR family protein; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal
YP_004295226.1	KEGG: amr:AM1_6172 IS5 family transposase
YP_004295227.1	KEGG: gsu:GSU0010 sensory box histidine kinase/response regulator
YP_004295228.1	PFAM: Flagellin, D0/D1 domain; Flagellin hook, IN motif; KEGG: azo:azo2704 flagellin
YP_004295229.1	PFAM: Flagellar protein FlaG protein; KEGG: neu:NE1594 hypothetical protein
YP_004295230.1	PFAM: Flagellar hook-associated 2, C-terminal; Flagellar hook-associated protein 2, N-terminal; KEGG: neu:NE1595 flagellar hook-associated protein 2
YP_004295231.1	KEGG: neu:NE1596 flagellar protein FliS; TIGRFAM: Flagellar protein FliS; PFAM: Flagellar protein FliS
YP_004295232.1	PFAM: Flagellar export chaperone, FliT; KEGG: neu:NE1597 hypothetical protein
YP_004295233.1	KEGG: net:Neut_0751 hypothetical protein
YP_004295234.1	PFAM: Type III secretion exporter; KEGG: neu:NE2078 flagellar biosynthetic protein
YP_004295235.1	PFAM: YcgR; Type IV pilus assembly PilZ; KEGG: neu:NE2079 hypothetical protein
YP_004295236.1	PFAM: Integrase, catalytic core; KEGG: swi:Swit_4958 transposase
YP_004295237.1	KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004295238.1	PFAM: YCII-related; KEGG: pfl:PFL_4564 DGPF domain-containing protein
YP_004295239.1	PFAM: YCII-related; KEGG: hch:HCH_05597 hypothetical protein
YP_004295240.1	KEGG: nde:NIDE3487 putative RNA polymerase ECF-type sigma factor containing TPR repeat; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2
YP_004295242.1	PFAM: Glycoside hydrolase, family 42, N-terminal; KEGG: nde:NIDE1370 hypothetical protein
YP_004295244.1	KEGG: nde:NIDE1370 hypothetical protein
YP_004295245.1	KEGG: nde:NIDE1370 hypothetical protein
YP_004295246.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold-4; Diguanylate cyclase, predicted; KEGG: tjr:TherJR_1729 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif
YP_004295247.1	PFAM: Peptide chain release factor class I/class II; KEGG: sde:Sde_3201 hypothetical protein
YP_004295248.1	KEGG: cja:CJA_3640 type I restriction-modification system specificity subunit; PFAM: DNA methylase, adenine-specific; N6 adenine-specific DNA methyltransferase, N12 class, N-terminal
YP_004295249.1	PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: mpt:Mpe_A0006 restriction modification system, type I
YP_004295250.1	KEGG: hap:HAPS_0834 hypothetical protein
YP_004295251.1	PFAM: Protein of unknown function DUF2191; KEGG: xau:Xaut_3924 hypothetical protein
YP_004295252.1	PFAM: PilT protein, N-terminal; KEGG: sjp:SJA_C1-29410 putative nucleic-acid-binding protein
YP_004295253.1	PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein
YP_004295254.1	PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit
YP_004295255.1	PFAM: Domain of unknown function DUF88; KEGG: neu:NE0665 hypothetical protein
YP_004295256.1	KEGG: neu:NE2199 flavin-containing monooxygenase (FMO); PFAM: Flavin-containing monooxygenase-like
YP_004295257.1	PFAM: Uncharacterised protein family UPF0061; KEGG: pca:Pcar_0297 hypothetical protein
YP_004295258.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nmu:Nmul_A1593 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004295259.1	KEGG: tau:Tola_1511 hypothetical protein
YP_004295260.1	PFAM: Polyketide cyclase/dehydrase; KEGG: bph:Bphy_5310 hypothetical protein
YP_004295261.1	PFAM: Protein of unknown function DUF3330; KEGG: nhl:Nhal_3036 hypothetical protein
YP_004295262.1	KEGG: neu:NE0083 hypothetical protein
YP_004295263.1	KEGG: nmu:Nmul_A0147 hypothetical protein
YP_004295264.1	KEGG: meh:M301_1663 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal
YP_004295265.1	TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: meh:M301_1662 PAS/PAC sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004295266.1	KEGG: ngr:NAEGRDRAFT_78100 CAP_ED domain-containing protein
YP_004295267.1	PFAM: Protein of unknown function DUF897; KEGG: rce:RC1_1255 hypothetical protein
YP_004295268.1	KEGG: tal:Thal_0656 nitrogen regulatory protein P-II
YP_004295269.1	KEGG: nmu:Nmul_A0029 hypothetical protein
YP_004295270.1	TIGRFAM: Peptidase A8, signal peptidase II; KEGG: nmu:Nmul_A2655 lipoprotein signal peptidase; PFAM: Peptidase A8, signal peptidase II
YP_004295271.1	TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; KEGG: net:Neut_1439 isoleucyl-tRNA synthetase
YP_004295272.1	SMART: Riboflavin kinase; TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: nmu:Nmul_A2653 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase
YP_004295273.1	KEGG: alv:Alvin_2929 hemolysin-type calcium-binding region
YP_004295274.1	PFAM: Sulphatase-modifying factor; Methyltransferase type 11; KEGG: net:Neut_0838 hypothetical protein
YP_004295275.1	KEGG: nmu:Nmul_A2256 aminotransferase, class I and II; PFAM: Aminotransferase, class I/classII
YP_004295276.1	KEGG: net:Neut_2234 succinyl-diaminopimelate desuccinylase; TIGRFAM: Succinyl-diaminopimelate desuccinylase, proteobacteria; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004295277.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Heat shock protein HslU; KEGG: net:Neut_0611 ATP-dependent protease ATP-binding subunit HslU; HAMAP: Heat shock protein HslU; PFAM: ATPase, AAA-2
YP_004295278.1	KEGG: nmu:Nmul_A2545 ATP-dependent protease peptidase subunit; TIGRFAM: ATP-dependent protease, HslV subunit; PFAM: Proteasome, subunit alpha/beta
YP_004295279.1	KEGG: mei:Msip34_0172 tyrosine recombinase XerC; TIGRFAM: Tyrosine recombinase XerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage
YP_004295280.1	PFAM: Protein of unknown function DUF484; KEGG: nmu:Nmul_A2543 hypothetical protein
YP_004295281.1	TIGRFAM: Diaminopimelate epimerase; KEGG: nmu:Nmul_A2542 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase
YP_004295282.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: app:CAP2UW1_4174 GCN5-related N-acetyltransferase
YP_004295283.1	PFAM: Copper chaperone SCO1/SenC; KEGG: pfo:Pfl01_2002 electron transport protein SCO1/SenC
YP_004295284.1	KEGG: nde:NIDE3511 putative multicopper oxidase, type 2; PFAM: Multicopper oxidase, type 2
YP_004295285.1	KEGG: lch:Lcho_2298 heme peroxidase; PFAM: Haem peroxidase, animal; Haemolysin-type calcium-binding repeat; Peptidase M10B, serralysin, C-terminal
YP_004295286.1	PFAM: Uncharacterised protein family PGPGW, transmembrane; KEGG: nde:NIDE4159 hypothetical protein
YP_004295287.1	KEGG: nmu:Nmul_A2766 ammonia monooxygenase/methane monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C
YP_004295288.1	PFAM: Phosphate-selective porin O/P; KEGG: nmu:Nmul_A2678 phosphate-selective porin O and P
YP_004295289.1	TIGRFAM: Phosphate binding protein; KEGG: nmu:Nmul_A0486 phosphate binding protein
YP_004295290.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: nmu:Nmul_A2332 binding-protein dependent transport system inner membrane protein
YP_004295291.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: nmu:Nmul_A2331 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004295292.1	KEGG: neu:NE2481 peptide chain release factor 3; TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2
YP_004295293.1	KEGG: cps:CPS_1981 hypothetical protein
YP_004295294.1	KEGG: nmu:Nmul_A0065 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: YicC-like, N-terminal; Domain of unknown function DUF1732
YP_004295295.1	KEGG: nmu:Nmul_A1813 hypothetical protein
YP_004295296.1	manually curated; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: slt:Slit_2634 multi-sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004295297.1	KEGG: slt:Slit_2633 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core
YP_004295298.1	PFAM: Protein of unknown function DUF2780, VcgC/VcgE; KEGG: nhl:Nhal_3008 hypothetical protein
YP_004295299.1	KEGG: ngr:NAEGRDRAFT_39225 hypothetical protein
YP_004295300.1	KEGG: pin:Ping_1732 magnesium and cobalt transport protein CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like
YP_004295301.1	PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase
YP_004295302.1	KEGG: nmu:Nmul_A2031 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial
YP_004295303.1	KEGG: neu:NE0846 hypothetical protein
YP_004295304.1	TIGRFAM: Uncharacterised protein family UPF0102; HAMAP: Uncharacterised protein family UPF0102; KEGG: net:Neut_1662 hypothetical protein; PFAM: Uncharacterised protein family UPF0102
YP_004295305.1	PFAM: LppC putative lipoprotein; KEGG: slt:Slit_2963 LppC family lipoprotein
YP_004295306.1	KEGG: nmu:Nmul_A0196 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0011; PFAM: Tetrapyrrole methylase
YP_004295307.1	PFAM: Amidohydrolase 1; TIGRFAM: Dihydroorotase homodimeric type; HAMAP: Dihydroorotase homodimeric type; KEGG: nmu:Nmul_A0354 dihydroorotase
YP_004295308.1	KEGG: api:100166722 hypothetical protein LOC100166722
YP_004295309.1	PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal; Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal; KEGG: neu:NE1485 D-alanyl-D-alanine carboxypeptidase; SMART: Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal
YP_004295310.1	KEGG: nmu:Nmul_A1990 aminotransferase, class IV; PFAM: Aminotransferase, class IV
YP_004295311.1	PFAM: Protein of unknown function DUF493; KEGG: net:Neut_0759 hypothetical protein
YP_004295312.1	TIGRFAM: Octanoyltransferase; KEGG: nmu:Nmul_A1988 lipoate-protein ligase B; PFAM: Biotin/lipoate A/B protein ligase
YP_004295313.1	SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Lipoate synthase; KEGG: nmu:Nmul_A1987 lipoyl synthase; PFAM: Radical SAM
YP_004295314.1	PFAM: Peroxiredoxin, OsmC-like protein; KEGG: net:Neut_1426 OsmC family protein
YP_004295315.1	PFAM: Cytochrome c, class I; KEGG: neu:NE0102 cytochrome c-552 precursor
YP_004295316.1	TIGRFAM: Dihydroxy-acid dehydratase; KEGG: nmu:Nmul_A0346 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase
YP_004295317.1	KEGG: nmu:Nmul_A0348 prolipoprotein diacylglyceryl transferase; TIGRFAM: Prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase
YP_004295318.1	KEGG: nmu:Nmul_A2466 hypothetical protein
YP_004295319.1	TIGRFAM: Signal transduction histidine kinase, phosphate regulon sensor PhoR; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: net:Neut_0960 periplasmic sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS
YP_004295320.1	TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; KEGG: azo:azo0164 phosphate regulon transcriptional regulatory protein; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004295321.1	PFAM: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal; KEGG: nmu:Nmul_A2270 hypothetical protein
YP_004295322.1	KEGG: neu:NE1146 ubiquinone/menaquinone biosynthesis methlytransferase; TIGRFAM: UbiE/COQ5 methyltransferase; PFAM: UbiE/COQ5 methyltransferase
YP_004295323.1	KEGG: net:Neut_0128 hypothetical protein
YP_004295325.1	manually curated; KEGG: pde:Pden_2067 hypothetical protein
YP_004295326.1	PFAM: Outer membrane lipoprotein Slp; KEGG: nmu:Nmul_A2260 Slp family outer membrane lipoprotein
YP_004295327.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: ppd:Ppro_1834 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004295328.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: neu:NE0621 hypothetical protein
YP_004295329.1	KEGG: neu:NE0620 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type
YP_004295330.1	SMART: Protein phosphatase 2C-like; KEGG: tal:Thal_0189 protein serine/threonine phosphatase
YP_004295331.1	KEGG: cro:ROD_35221 hypothetical protein
YP_004295332.1	PFAM: Dienelactone hydrolase; KEGG: cbc:CbuK_0985 carboxymethylenebutenolidase
YP_004295333.1	PFAM: Domain of unknown function DUF336; KEGG: noc:Noc_2147 hypothetical protein
YP_004295334.1	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: nmu:Nmul_A1386 DNA polymerase III, delta prime subunit
YP_004295335.1	TIGRFAM: Thymidylate kinase; KEGG: neu:NE2181 thymidylate kinase; PFAM: Thymidylate kinase
YP_004295336.1	KEGG: net:Neut_0535 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2
YP_004295337.1	PFAM: Protein of unknown function DUF497; KEGG: slt:Slit_0383 protein of unknown function DUF497
YP_004295338.1	KEGG: tmz:Tmz1t_2739 hypothetical protein
YP_004295339.1	KEGG: phu:Phum_PHUM079850 hypothetical protein
YP_004295340.1	PFAM: Aldose 1-epimerase; KEGG: neu:NE1003 aldose 1-epimerase
YP_004295341.1	PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; TIGRFAM: Phosphoribosylglycinamide formyltransferase 2; HAMAP: Phosphoribosylglycinamide formyltransferase 2; KEGG: gca:Galf_1708 phosphoribosylglycinamide formyltransferase 2
YP_004295342.1	KEGG: nmu:Nmul_A2530 4Fe-4S cluster binding; TIGRFAM: 4Fe-4S cluster binding; PFAM: Domain of unknown function DUF1730; 4Fe-4S binding domain
YP_004295343.1	manually curated; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; KEGG: neu:NE0657 hydrolase; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria
YP_004295344.1	KEGG: net:Neut_1896 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Localisation of periplasmic protein complexes; SMART: Cell wall hydrolase/autolysin, catalytic
YP_004295345.1	KEGG: nmu:Nmul_A1981 hypothetical protein; TIGRFAM: Domain of unknown function DUF140; PFAM: Domain of unknown function DUF140
YP_004295346.1	PFAM: ABC transporter-like; KEGG: net:Neut_2235 ABC transporter-related protein; SMART: ATPase, AAA+ type, core
YP_004295347.1	PFAM: Mammalian cell entry-related; KEGG: nmu:Nmul_A1983 hypothetical protein
YP_004295348.1	PFAM: Protein of unknown function DUF330; KEGG: nmu:Nmul_A1984 putative lipoprotein
YP_004295349.1	KEGG: kko:Kkor_0174 lipoprotein Lppl
YP_004295350.1	TIGRFAM: Diaminopimelate decarboxylase; KEGG: neu:NE1957 Orn/DAP/Arg decarboxylase family protein; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal
YP_004295351.1	PFAM: Squalene/phytoene synthase; KEGG: net:Neut_0403 squalene/phytoene synthase
YP_004295352.1	KEGG: nmu:Nmul_A2281 NAD-dependent epimerase/dehydratase; TIGRFAM: Hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase
YP_004295353.1	KEGG: neu:NE1923 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain
YP_004295354.1	PFAM: Chemotaxis phosphatase, CheZ; KEGG: gca:Galf_1017 chemotaxis phosphatase, CheZ
YP_004295355.1	KEGG: net:Neut_0952 hypothetical protein
YP_004295356.1	PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal; KEGG: nmu:Nmul_A2296 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1
YP_004295357.1	KEGG: nde:NIDE1041 carboxypeptidase Taq; PFAM: Peptidase M32, carboxypeptidase Taq metallopeptidase
YP_004295358.1	KEGG: neu:NE1756 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00701; PFAM: Uncharacterised protein family UPF0093
YP_004295359.1	KEGG: ant:Arnit_1534 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004295360.1	KEGG: alv:Alvin_3221 hypothetical protein
YP_004295361.1	KEGG: cta:CTA_0394 aspartate kinase
YP_004295362.1	KEGG: neu:NE1553 transposase
YP_004295363.1	PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase
YP_004295364.1	KEGG: eba:ebB55 transposase, fragment; manually curated; PFAM: Transposase (putative), IS66 Orf2-like
YP_004295365.1	KEGG: dat:HRM2_44620 hypothetical protein
YP_004295366.1	SMART: PAC motif; PAS; TIGRFAM: PAS; KEGG: nhl:Nhal_0365 PAS sensor protein; PFAM: PAS fold
YP_004295367.1	PFAM: Polyketide cyclase/dehydrase; KEGG: nmu:Nmul_A1788 hypothetical protein
YP_004295368.1	PFAM: FAD dependent oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; KEGG: net:Neut_0652 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004295369.1	TIGRFAM: Glutamyl-Q tRNA(Asp) synthetase; HAMAP: Glutamyl-Q tRNA(Asp) synthetase; KEGG: nmu:Nmul_A0797 glutamate--tRNA ligase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
YP_004295370.1	PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein
YP_004295371.1	PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit
YP_004295372.1	TIGRFAM: Murein peptide ligase; KEGG: slt:Slit_0052 UDP-N-acetylmuramate; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal
YP_004295373.1	KEGG: nmu:Nmul_A0935 adenine phosphoribosyltransferase; TIGRFAM: Adenine phosphoribosyl transferase; PFAM: Phosphoribosyltransferase
YP_004295374.1	TIGRFAM: Nitrite reductase, copper containing; KEGG: rpa:RPA3306 nitrite reductase, major outer membrane copper-containing protein; PFAM: Multicopper oxidase, type 1; Multicopper oxidase, type 3
YP_004295375.1	KEGG: neu:NE1294 putative glutamate--cysteine ligase; TIGRFAM: Glutamate--cysteine ligase GshA; PFAM: Glutamate--cysteine ligase GshA
YP_004295376.1	TIGRFAM: Glutathione synthetase, prokaryotic; KEGG: neu:NE1295 glutathione synthetase; PFAM: Prokaryotic glutathione synthetase, ATP-binding; Prokaryotic glutathione synthetase, N-terminal
YP_004295377.1	PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: pat:Patl_1023 peptidyl-prolyl cis-trans isomerase, cyclophilin type
YP_004295378.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: nmu:Nmul_A1798 ATP-dependent metalloprotease FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular
YP_004295379.1	PFAM: Membrane protein, aromatic hydrocarbon degradation; KEGG: mfa:Mfla_2658 aromatic hydrocarbon degradation membrane protein
YP_004295380.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold; KEGG: noc:Noc_2021 PAS sensor diguanylate cyclase/phophodiesterase; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS
YP_004295381.1	PFAM: Cyclic nucleotide-binding domain; KEGG: bxe:Bxe_B1519 Crp/FNR family transcriptional regulator
YP_004295382.1	PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase
YP_004295383.1	PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase
YP_004295384.1	PFAM: Transposase (putative), IS66 Orf2-like; KEGG: eba:ebB55 transposase, fragment
YP_004295385.1	KEGG: dat:HRM2_44620 hypothetical protein
YP_004295386.1	KEGG: ppr:PBPRB1378 hypothetical protein
YP_004295387.1	TIGRFAM: Formylmethionine deformylase; KEGG: mfa:Mfla_1466 peptide deformylase; PFAM: Formylmethionine deformylase
YP_004295388.1	KEGG: nmu:Nmul_A0650 5'-methylthioadenosine phosphorylase; PFAM: Nucleoside phosphorylase domain
YP_004295389.1	PFAM: Phosphoribosyltransferase; KEGG: nmu:Nmul_A0649 hypoxanthine-guanine phosphoribosyltransferase
YP_004295390.1	TIGRFAM: NAD-dependent DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; Zinc-finger, NAD-dependent DNA ligase C4-type; BRCT; NAD-dependent DNA ligase, OB-fold; KEGG: nmu:Nmul_A0647 DNA ligase, NAD-dependent; SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT
YP_004295391.1	PFAM: Protein of unknown function DUF2914; KEGG: neu:NE1157 hypothetical protein
YP_004295392.1	PFAM: NUDIX hydrolase domain; KEGG: net:Neut_1448 NUDIX hydrolase
YP_004295393.1	KEGG: pin:Ping_0586 hypothetical protein
YP_004295394.1	KEGG: reu:Reut_A2245 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP015557; PFAM: Uncharacterised conserved protein UCP015557
YP_004295395.1	TIGRFAM: Translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; KEGG: cvi:CV_1378 elongation factor P; SMART: Elongation factor P, C-terminal
YP_004295396.1	KEGG: nmu:Nmul_A0701 nitrogen-fixing NifU-like; PFAM: NIF system FeS cluster assembly, NifU-like scaffold, N-terminal; NIF system FeS cluster assembly, NifU, C-terminal; SMART: NIF system FeS cluster assembly, NifU-like scaffold, N-terminal
YP_004295397.1	KEGG: nmu:Nmul_A0700 SUF system FeS assembly protein; TIGRFAM: SUF system FeS cluster assembly, SufU scaffold; PFAM: NIF system FeS cluster assembly, NifU, N-terminal
YP_004295398.1	TIGRFAM: Cysteine desulfurase, SufS; KEGG: nmu:Nmul_A0699 SufS subfamily cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_004295399.1	KEGG: nmu:Nmul_A0698 FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: SUF system FeS cluster assembly, SufBD
YP_004295400.1	TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: net:Neut_1240 FeS assembly ATPase SufC; SMART: ATPase, AAA+ type, core
YP_004295401.1	KEGG: nmu:Nmul_A0696 cysteine desulfurase activator complex subunit SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD
YP_004295402.1	KEGG: nmu:Nmul_A0695 HesB/YadR/YfhF; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis
YP_004295403.1	KEGG: nmu:Nmul_A0694 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcription regulator Rrf2; PFAM: Transcription regulator Rrf2
YP_004295405.1	PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit
YP_004295406.1	PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein
YP_004295407.1	KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004295408.1	KEGG: bpr:GBP346_A2062 hemagglutinin family protein
YP_004295409.1	KEGG: ddi:DDB_G0277915 Ras guanine nucleotide exchange factor
YP_004295411.1	KEGG: pbe:PB301139.00.0 hypothetical protein
YP_004295412.1	PFAM: Transposase, IS4-like; KEGG: atu:Atu4436 IS5 family transposase
YP_004295413.1	manually curated; KEGG: rxy:Rxyl_2225 integrase catalytic subunit
YP_004295414.1	PFAM: Transposase, IS4-like; KEGG: dia:Dtpsy_3344 transposase IS4 family protein
YP_004295415.1	PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit
YP_004295416.1	PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein
YP_004295417.1	manually curated; PFAM: IstB-like ATP-binding protein; KEGG: tmz:Tmz1t_3172 IstB domain protein ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004295418.1	PFAM: Transposase, IS116/IS110/IS902; KEGG: ecp:ECP_4551 putative transposase
YP_004295419.1	PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit
YP_004295420.1	PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein
YP_004295421.1	PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region
YP_004295422.1	KEGG: gur:Gura_3602 helix-turn-helix domain-containing protein
YP_004295423.1	KEGG: neu:NE0189 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004295424.1	KEGG: noc:Noc_0284 hypothetical protein
YP_004295425.1	PFAM: Integrase, catalytic core, phage; KEGG: lpf:lpl0065 hypothetical protein
YP_004295426.1	KEGG: bam:Bamb_4189 plasmid stability protein-like protein
YP_004295427.1	PFAM: PilT protein, N-terminal; KEGG: reu:Reut_A3455 PilT protein, N-terminal
YP_004295428.1	KEGG: neu:NE1876 coproporphyrinogen III oxidase; PFAM: Coproporphyrinogen III oxidase
YP_004295429.1	PFAM: Sodium:dicarboxylate symporter; KEGG: nmu:Nmul_A0633 sodium:dicarboxylate symporter
YP_004295430.1	KEGG: nmu:Nmul_A1663 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain
YP_004295431.1	PFAM: RIO-like kinase; KEGG: gur:Gura_1606 protein of unknown function RIO1
YP_004295432.1	KEGG: gdi:GDI_0967 putative resolvase; PFAM: Recombinase; Resolvase, N-terminal; SMART: Resolvase, N-terminal
YP_004295433.1	KEGG: nha:Nham_0588 hypothetical protein
YP_004295434.1	KEGG: aci:ACIAD1868 putative nucleoprotein/polynucleotide-associated enzyme
YP_004295435.1	KEGG: pla:Plav_1628 hypothetical protein
YP_004295436.1	PFAM: Transposase, IS4-like; KEGG: atu:Atu4436 IS5 family transposase
YP_004295438.1	PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region
YP_004295439.1	PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit
YP_004295440.1	manually curated; KEGG: llo:LLO_2896 TraM protein
YP_004295441.1	KEGG: afr:AFE_0996 DNA binding protein, excisionase family
YP_004295442.1	KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004295443.1	PFAM: Integrase, catalytic core; Resolvase, helix-turn-helix domain; KEGG: pst:PSPTO_B0040 ISPsy4, transposase
YP_004295444.1	PFAM: Integrase, catalytic core, phage; KEGG: afr:AFE_0995 site-specific recombinase, phage integrase family
YP_004295445.1	PFAM: Stringent starvation protein B; KEGG: rsc:RCFBP_10526 stringent starvation protein B, ClpXP protease specificity-enhancing factor
YP_004295446.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: neu:NE0812 transcription modulator protein
YP_004295447.1	PFAM: Cytochrome c1; KEGG: net:Neut_1112 cytochrome c1
YP_004295448.1	PFAM: Cytochrome b/b6, C-terminal; Cytochrome b/b6, N-terminal; KEGG: neu:NE0810 cytochrome b/b6
YP_004295449.1	TIGRFAM: Ubiquinol-cytochrome c reductase, iron-sulphur subunit; KEGG: nmu:Nmul_A1005 ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal
YP_004295450.1	TIGRFAM: SecA protein; PFAM: SecA DEAD-like, N-terminal; SEC-C motif; SecA preprotein, cross-linking domain; SecA Wing/Scaffold; KEGG: nmu:Nmul_A2485 preprotein translocase subunit SecA; SMART: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain
YP_004295451.1	PFAM: Peptidase M23; KEGG: nmu:Nmul_A2486 peptidase M23B
YP_004295452.1	PFAM: Protein of unknown function DUF721/UPF0232; KEGG: nmu:Nmul_A2487 hypothetical protein
YP_004295453.1	KEGG: ppr:PBPRB1378 hypothetical protein
YP_004295454.1	KEGG: net:Neut_0498 ribonuclease II; PFAM: Ribonuclease II/R; SMART: Ribonuclease II/R
YP_004295455.1	TIGRFAM: TonB, C-terminal; KEGG: neu:NE1626 putative TonB protein
YP_004295456.1	KEGG: nmu:Nmul_A0538 shikimate 5-dehydrogenase; TIGRFAM: Shikimate dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
YP_004295457.1	TIGRFAM: Divalent cation transporter; PFAM: Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core; MgtE magnesium transporter, integral membrane; KEGG: neu:NE1633 divalent cation transporter; SMART: Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core
YP_004295458.1	PFAM: Glycosyl transferase, family 8; KEGG: eba:ebA1583 hypothetical protein
YP_004295459.1	PFAM: Glycosyl transferase, group 1; KEGG: dsh:Dshi_4121 glycosyl transferase family protein
YP_004295460.1	PFAM: Methyltransferase type 12; KEGG: neu:NE0484 hypothetical protein
YP_004295461.1	PFAM: ABC transporter-like; KEGG: neu:NE0483 polysaccharide ABC transporter ATPase; SMART: ATPase, AAA+ type, core
YP_004295462.1	PFAM: ABC-2 type transporter; KEGG: mes:Meso_3693 ABC-2 type transporter
YP_004295463.1	KEGG: tps:THAPSDRAFT_12125 hypothetical protein
YP_004295464.1	manually curated; KEGG: xop:PXO_04569 putative transposase
YP_004295465.1	KEGG: nmu:Nmul_A2758 major facilitator transporter
YP_004295466.1	TIGRFAM: Fumarate hydratase, class II; KEGG: nmu:Nmul_A2471 fumarate hydratase; PFAM: Lyase 1, N-terminal; Fumarase C, C-terminal
YP_004295467.1	KEGG: net:Neut_1998 transcriptional regulator, XRE family protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004295468.1	PFAM: Plasmid stabilisation system; KEGG: nhl:Nhal_1008 phage protein
YP_004295469.1	KEGG: aci:ACIAD1890 fumarate hydratase
YP_004295470.1	KEGG: cja:CJA_0812 hypothetical protein
YP_004295471.1	KEGG: swd:Swoo_4501 hypothetical protein
YP_004295472.1	KEGG: nmu:Nmul_A2469 ribonucleotide-diphosphate reductase subunit beta; PFAM: Ribonucleotide reductase
YP_004295473.1	KEGG: nmu:Nmul_A2468 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ATP-cone
YP_004295474.1	PFAM: Protein of unknown function DUF188; KEGG: tgr:Tgr7_2584 protein of unknown function DUF188
YP_004295475.1	TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: neu:NE2127 CDP-diacylglycerol--glycerol-3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_004295476.1	KEGG: nmu:Nmul_A1271 excinuclease ABC subunit C; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; Helix-hairpin-helix motif; manually curated; TIGRFAM: Excinuclease ABC, C subunit; SMART: Excinuclease ABC, C subunit, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; HAMAP: Excinuclease ABC, C subunit
YP_004295477.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: neu:NE0932 putative isomerase
YP_004295478.1	PFAM: Uracil-DNA glycosylase-like; KEGG: net:Neut_1410 uracil-DNA glycosylase superfamily protein
YP_004295479.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sun:SUN_1448 phosphatidylglycerophosphate synthase
YP_004295480.1	PFAM: Uncharacterised protein family UPF0290; KEGG: hch:HCH_02040 CDP-diglyceride synthetase
YP_004295481.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: nmu:Nmul_A0606 endonuclease/exonuclease/phosphatase
YP_004295482.1	SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: nmu:Nmul_A2338 ATP-dependent protease La; PFAM: Peptidase S16, Lon C-terminal; ATPase, AAA-type, core; Peptidase S16, lon N-terminal
YP_004295483.1	TIGRFAM: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase, AAA-2; Clp ATPase, C-terminal; Zinc finger, C4-type; KEGG: nmu:Nmul_A2339 ATP-dependent protease ATP-binding subunit ClpX; SMART: ATPase, AAA+ type, core
YP_004295484.1	TIGRFAM: Peptidase S14, ClpP; KEGG: nmu:Nmul_A2340 ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: Peptidase S14, ClpP
YP_004295485.1	KEGG: nmu:Nmul_A2341 trigger factor; TIGRFAM: Trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Trigger factor, C-terminal, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_004295486.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nmu:Nmul_A2342 short-chain dehydrogenase/reductase SDR
YP_004295487.1	KEGG: nmu:Nmul_A2344 chaperonin GroEL; TIGRFAM: Chaperonin Cpn60; PFAM: Chaperonin Cpn60/TCP-1
YP_004295488.1	KEGG: nmu:Nmul_A2345 co-chaperonin GroES; PFAM: Chaperonin Cpn10; SMART: Chaperonin Cpn10
YP_004295489.1	PFAM: Transposase IS3/IS911family; KEGG: rms:RMA_0745 transposase
YP_004295490.1	PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region
YP_004295491.1	PFAM: Integrase, catalytic core; KEGG: net:Neut_2192 integrase catalytic subunit
YP_004295492.1	PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: mmb:Mmol_0462 peptidase S24 and S26 domain protein
YP_004295493.1	SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: mei:Msip34_2797 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal
YP_004295494.1	KEGG: rcu:RCOM_1869020 uv inducible DNA polymerase umuc / mucb, putative; PFAM: DNA-repair protein, UmuC-like
YP_004295495.1	KEGG: tva:TVAG_358270 hypothetical protein
YP_004295496.1	KEGG: acp:A2cp1_0062 hypothetical protein
YP_004295497.1	KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004295498.1	PFAM: Integrase, catalytic core; KEGG: swi:Swit_4958 transposase
YP_004295499.1	PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase
YP_004295500.1	KEGG: eba:ebB55 transposase, fragment; manually curated; PFAM: Transposase (putative), IS66 Orf2-like
YP_004295501.1	KEGG: dat:HRM2_44620 hypothetical protein
YP_004295502.1	KEGG: eba:ebA808 hypothetical protein
YP_004295503.1	KEGG: dac:Daci_1630 hypothetical protein
YP_004295504.1	KEGG: cdf:CDP04 putative phage capsid protein
YP_004295505.1	KEGG: aag:AaeL_AAEL006891 prickle
YP_004295506.1	KEGG: meh:M301_1151 hypothetical protein
YP_004295507.1	PFAM: ParB-like nuclease; KEGG: sus:Acid_1672 hypothetical protein
YP_004295508.1	KEGG: rpf:Rpic12D_3450 hypothetical protein
YP_004295509.1	PFAM: Prophage CP4-57 regulatory; KEGG: gca:Galf_2036 phage transcriptional regulator, AlpA
YP_004295510.1	KEGG: pfh:PFHG_01564 conserved hypothetical protein
YP_004295511.1	PFAM: Integrase, catalytic core, phage; KEGG: cvi:CV_0651 prophage CP4-like integrase
YP_004295512.1	KEGG: dar:Daro_1081 magnesium/cobalt transporter CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like
YP_004295513.1	KEGG: nmu:Nmul_A2243 tRNA-specific 2-thiouridylase MnmA; TIGRFAM: tRNA-specific 2-thiouridylase; PFAM: tRNA-specific 2-thiouridylase
YP_004295514.1	PFAM: NUDIX hydrolase domain; KEGG: nmu:Nmul_A2244 NUDIX hydrolase
YP_004295515.1	PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: avn:Avin_38450 hypothetical protein
YP_004295516.1	KEGG: mca:MCA1082 hypothetical protein
YP_004295517.1	KEGG: spu:575561 hypothetical LOC575561
YP_004295518.1	KEGG: cel:R144.2 hypothetical protein
YP_004295519.1	TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated domain; Helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Domain of unknown function DUF1605; KEGG: nmu:Nmul_A1393 ATP-dependent helicase HrpA; SMART: Helicase-associated domain; DEAD-like helicase, N-terminal; Helicase, C-terminal; ATPase, AAA+ type, core
YP_004295520.1	KEGG: swo:Swol_1551 hypothetical protein; TIGRFAM: Addiction module component, CHP02574; PFAM: Addiction module component, CHP02574
YP_004295521.1	PFAM: Plasmid stabilisation system; KEGG: pph:Ppha_1705 plasmid stabilization system
YP_004295522.1	PFAM: Protein of unknown function DUF2081; Domain of unknown function DUF262; KEGG: slp:Slip_0088 protein of unknown function DUF2081
YP_004295523.1	PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein
YP_004295525.1	KEGG: mbu:Mbur_1706 hypothetical protein
YP_004295526.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mem:Memar_2271 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004295527.1	PFAM: TfoX, C-terminal; KEGG: cpb:Cphamn1_2250 TfoX domain protein
YP_004295528.1	KEGG: lbz:LbrM24_V2.1470 hypothetical protein
YP_004295530.1	KEGG: lpa:lpa_00291 hypothetical protein; PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like)
YP_004295531.1	PFAM: Glutathione S-transferase, C-terminal; KEGG: mmb:Mmol_1943 glutathione S-transferase domain protein
YP_004295532.1	KEGG: slt:Slit_2005 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal
YP_004295533.1	PFAM: BolA protein; KEGG: nmu:Nmul_A2742 BolA-like protein
YP_004295534.1	PFAM: ABC-2 type transporter; KEGG: nmu:Nmul_A2743 hypothetical protein
YP_004295535.1	PFAM: ABC transporter-like; KEGG: nmu:Nmul_A2744 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004295536.1	PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: nmu:Nmul_A2745 anti-sigma-factor antagonist domain-containing protein
YP_004295537.1	PFAM: Toluene tolerance Ttg2; KEGG: net:Neut_0854 toluene tolerance family protein
YP_004295538.1	PFAM: Mammalian cell entry-related; KEGG: nmu:Nmul_A2747 hypothetical protein
YP_004295539.1	KEGG: nmu:Nmul_A2748 hypothetical protein; TIGRFAM: Domain of unknown function DUF140; PFAM: Domain of unknown function DUF140
YP_004295540.1	PFAM: ABC transporter-like; KEGG: nmu:Nmul_A2749 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004295541.1	KEGG: net:Neut_0850 nuclease; PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like)
YP_004295542.1	KEGG: neu:NE1533 putative aminopeptidase 2; PFAM: Peptidase M18
YP_004295543.1	PFAM: Haemolysin-type calcium-binding repeat; KEGG: pde:Pden_0560 hemolysin-type calcium-binding region
YP_004295544.1	KEGG: net:Neut_1381 cytochrome c, class I; PFAM: Cytochrome c, class I
YP_004295545.1	PFAM: Cytochrome c, class I; KEGG: neu:NE0904 cytochrome c
YP_004295546.1	PFAM: Sodium/calcium exchanger membrane region; KEGG: mca:MCA0850 cation transporter, putative
YP_004295547.1	SMART: ATPase, P-type cation-transporter, N-terminal; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: slt:Slit_2864 ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: ATPase, P-type, ATPase-associated domain; ATPase, P-type cation-transporter, C-terminal; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase
YP_004295548.1	PFAM: Beta-lactamase hydrolase-like; KEGG: net:Neut_1090 hypothetical protein
YP_004295549.1	KEGG: mhu:Mhun_1175 methyl-accepting chemotaxis sensory transducer
YP_004295550.1	PFAM: Protein of unknown function DUF81; KEGG: rpf:Rpic12D_1707 protein of unknown function DUF81
YP_004295551.1	KEGG: neu:NE2567 hypothetical protein; TIGRFAM: Beta-lactamase hydrolase-like; PFAM: Beta-lactamase hydrolase-like; FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004295552.1	KEGG: neu:NE2568 ArsR family regulatory protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_004295553.1	PFAM: Domain of unknown function DUF395, YeeE/YedE; KEGG: nmu:Nmul_A1684 YeeE/YedE
YP_004295554.1	KEGG: nmu:Nmul_A1685 YeeE/YedE; manually curated; PFAM: Domain of unknown function DUF395, YeeE/YedE
YP_004295555.1	KEGG: nmu:Nmul_A1686 beta-lactamase-like; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like
YP_004295556.1	KEGG: mga:MGA_1131 DnaJ-like molecular chaperone; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal
YP_004295557.1	PFAM: Hemin uptake protein HemP; KEGG: neu:NE1541 hypothetical protein
YP_004295558.1	KEGG: neu:NE0863 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein
YP_004295559.1	KEGG: nmu:Nmul_A2395 hypothetical protein
YP_004295560.1	PFAM: Integrase, catalytic core; KEGG: swi:Swit_4958 transposase
YP_004295561.1	KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004295562.1	PFAM: Transposase IS200-like; KEGG: xne:XNC1_2829 transposase (fragment)
YP_004295563.1	KEGG: nmu:Nmul_A2762 hypothetical protein
YP_004295564.1	KEGG: nmu:Nmul_A1398 hypothetical protein
YP_004295565.1	KEGG: nmu:Nmul_A2764 monooxygenase subunit B protein; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B
YP_004295566.1	KEGG: nmu:Nmul_A2765 ammonia monooxygenase; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A
YP_004295567.1	KEGG: nmu:Nmul_A2766 ammonia monooxygenase/methane monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C
YP_004295568.1	PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region
YP_004295569.1	KEGG: net:Neut_1130 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain
YP_004295570.1	PFAM: Cation transporter; KEGG: neu:NE1835 cation transport protein
YP_004295571.1	PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: neu:NE1834 potassium transporter peripheral membrane component
YP_004295572.1	PFAM: Inositol monophosphatase; KEGG: net:Neut_1051 inositol monophosphatase
YP_004295573.1	PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: net:Neut_1050 redoxin domain-containing protein
YP_004295574.1	KEGG: neu:NE0779 16S ribosomal RNA methyltransferase RsmE; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: Ribosomal RNA small subunit methyltransferase E
YP_004295575.1	TIGRFAM: Amino-acid N-acetyltransferase (ArgA); KEGG: nmu:Nmul_A0380 N-acetylglutamate synthase; PFAM: Aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase (GNAT) domain
YP_004295576.1	PFAM: Fe(II) trafficking protein YggX; KEGG: neu:NE0322 hypothetical protein
YP_004295577.1	PFAM: ASPIC/UnbV; KEGG: cyc:PCC7424_4587 ASPIC/UnbV domain protein
YP_004295578.1	KEGG: phu:Phum_PHUM371240 hypothetical protein
YP_004295579.1	PFAM: Peptidase S16, Lon C-terminal; KEGG: rfr:Rfer_3315 putative ATP-dependent protease La, putative
YP_004295580.1	KEGG: ppr:PBPRB1378 hypothetical protein
YP_004295581.1	KEGG: nde:NIDE1370 hypothetical protein
YP_004295582.1	KEGG: nde:NIDE1370 hypothetical protein
YP_004295583.1	PFAM: Glycosyl transferase, family 2; KEGG: nmu:Nmul_A1366 glycosyl transferase family protein
YP_004295584.1	KEGG: nhl:Nhal_2068 hypothetical protein
YP_004295585.1	KEGG: slt:Slit_2458 carbohydrate kinase, FGGY-like protein; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal
YP_004295586.1	KEGG: slt:Slit_2459 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase
YP_004295587.1	PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: slt:Slit_2460 glycerophosphoryl diester phosphodiesterase
YP_004295588.1	PFAM: Ankyrin repeat; KEGG: aas:Aasi_1435 hypothetical protein
YP_004295589.1	KEGG: nmu:Nmul_A1977 hypothetical protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase
YP_004295590.1	PFAM: Zinc/iron permease; KEGG: nmu:Nmul_A1978 zinc transporter ZIP
YP_004295591.1	KEGG: dma:DMR_04640 hypothetical protein
YP_004295592.1	PFAM: Major facilitator superfamily MFS-1; KEGG: tye:THEYE_A0038 oxalate/formate antiporter
YP_004295593.1	KEGG: pif:PITG_13861 hypothetical protein
YP_004295594.1	KEGG: lme:LEUM_0004 recombination protein F
YP_004295595.1	KEGG: cfe:CF0099 hypothetical protein
YP_004295596.1	PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit
YP_004295597.1	PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein
YP_004295599.1	KEGG: ddf:DEFDS_P244 hypothetical protein
YP_004295600.1	PFAM: Transposase, IS4-like; KEGG: cyn:Cyan7425_5319 transposase IS4 family protein
YP_004295601.1	PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein
YP_004295602.1	PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit
YP_004295603.1	PFAM: Integrase, catalytic core; KEGG: mms:mma_2809 transposase IstA
YP_004295604.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: bba:Bd3594 hypothetical protein
YP_004295605.1	PFAM: RIO-like kinase; KEGG: mpt:Mpe_A1034 RIO-type serine/threonine protein kinase
YP_004295606.1	KEGG: gur:Gura_0848 3-demethylubiquinone-9 3-methyltransferase
YP_004295608.1	KEGG: lxx:Lxx04630 ABC transporter, permease protein
YP_004295609.1	PFAM: CopG-like DNA-binding; KEGG: rha:RHA1_ro08415 hypothetical protein
YP_004295610.1	KEGG: nmu:Nmul_A1811 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004295611.1	PFAM: Transposase IS3/IS911family; KEGG: rms:RMA_0745 transposase
YP_004295612.1	PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region
YP_004295613.1	KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004295614.1	PFAM: Integrase, catalytic core; KEGG: pst:PSPTO_B0040 ISPsy4, transposase
YP_004295615.1	TIGRFAM: GTP cyclohydrolase FolE2/MptA; KEGG: neu:NE1163 putative GTP cyclohydrolase; PFAM: GTP cyclohydrolase FolE2/MptA
YP_004295616.1	SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Deoxyxylulose-5-phosphate synthase; KEGG: net:Neut_1501 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; Dehydrogenase, E1 component
YP_004295617.1	KEGG: nmu:Nmul_A0235 polyprenyl synthetase; PFAM: Polyprenyl synthetase
YP_004295618.1	KEGG: net:Neut_1499 exodeoxyribonuclease VII small subunit; TIGRFAM: Exonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit
YP_004295619.1	KEGG: neu:NE0798 hypothetical protein
YP_004295620.1	KEGG: nmu:Nmul_A0400 hypothetical protein
YP_004295621.1	KEGG: nmu:Nmul_A0401 hypothetical protein
YP_004295622.1	PFAM: Permease YjgP/YjgQ, predicted; KEGG: neu:NE0801 hypothetical protein
YP_004295623.1	PFAM: Permease YjgP/YjgQ, predicted; KEGG: net:Neut_1103 permease YjgP/YjgQ family protein
YP_004295624.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: net:Neut_1104 CDP-alcohol phosphatidyltransferase
YP_004295625.1	PFAM: Diacylglycerol kinase, catalytic domain; KEGG: nmu:Nmul_A0406 hypothetical protein
YP_004295626.1	PFAM: Protein of unknown function DUF2959; KEGG: net:Neut_1107 hypothetical protein
YP_004295627.1	PFAM: YaeQ; KEGG: pca:Pcar_2272 hypothetical protein
YP_004295628.1	PFAM: Protein of unknown function DUF488; KEGG: rle:pRL120460 hypothetical protein
YP_004295629.1	KEGG: rcu:RCOM_1956380 hypothetical protein
YP_004295630.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: nmu:Nmul_A2300 MotA/TolQ/ExbB proton channel
YP_004295631.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: nmu:Nmul_A2301 biopolymer transport protein ExbD/TolR
YP_004295632.1	KEGG: nmu:Nmul_A2302 hypothetical protein
YP_004295633.1	PFAM: Protein of unknown function DUF3391; Metal-dependent phosphohydrolase, HD subdomain; KEGG: nwa:Nwat_2753 metal dependent phosphohydrolase
YP_004295634.1	KEGG: nwa:Nwat_2754 diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, EAL domain
YP_004295635.1	KEGG: meh:M301_0765 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial
YP_004295636.1	PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region
YP_004295638.1	manually curated; KEGG: mca:MCA0595 hypothetical protein
YP_004295639.1	PFAM: Glycoside hydrolase, family 19, catalytic; KEGG: dda:Dd703_0358 glycoside hydrolase family 19
YP_004295640.1	TIGRFAM: DNA mismatch repair protein, N-terminal; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATPase-like, ATP-binding domain; KEGG: nmu:Nmul_A1144 DNA mismatch repair protein MutL; SMART: MutL, C-terminal, dimerisation; ATPase-like, ATP-binding domain
YP_004295641.1	KEGG: rba:RB8859 D-lactate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_004295642.1	TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; ATPase, P-type, heavy metal translocating; KEGG: maq:Maqu_0131 copper-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; YHS; Haloacid dehalogenase-like hydrolase
YP_004295643.1	KEGG: noc:Noc_2414 flavoprotein WrbA; TIGRFAM: Flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase
YP_004295644.1	PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: neu:NE0738 hypothetical protein
YP_004295645.1	KEGG: neu:NE0739 cytochrome c, class I
YP_004295646.1	KEGG: neu:NE0740 hypothetical protein
YP_004295647.1	KEGG: neu:NE0741 FAD linked oxidase, N-terminal:FAD linked oxidase, C-terminal; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal
YP_004295648.1	KEGG: neu:NE0742 zinc-containing alcohol dehydrogenase superfamily protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like
YP_004295649.1	KEGG: ote:Oter_1695 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain
YP_004295650.1	KEGG: mlo:mll1810 hypothetical protein; manually curated; PFAM: Uncharacterised protein family UPF0118
YP_004295651.1	KEGG: gca:Galf_0047 hypothetical protein
YP_004295652.1	KEGG: gpb:HDN1F_12050 catalase; PFAM: Catalase-related subgroup; Catalase-related immune responsive
YP_004295653.1	KEGG: rpf:Rpic12D_4386 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein
YP_004295654.1	KEGG: pbe:PB000289.02.0 hypothetical protein
YP_004295655.1	TIGRFAM: Arginine biosynthesis protein ArgJ; KEGG: gca:Galf_0347 arginine biosynthesis bifunctional protein ArgJ; PFAM: Arginine biosynthesis protein ArgJ
YP_004295656.1	KEGG: nmu:Nmul_A1008 hypothetical protein; PFAM: Domain of unknown function DUF815; SMART: ATPase, AAA+ type, core
YP_004295657.1	PFAM: Thiamine monophosphate synthase; NUDIX hydrolase domain; KEGG: neu:NE2215 hypothetical protein
YP_004295658.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: hse:Hsero_4138 GGDEF domain-containing protein; SMART: Diguanylate cyclase, predicted
YP_004295659.1	PFAM: Uncharacterised protein family, zinc-binding; KEGG: nmu:Nmul_A1006 hypothetical protein
YP_004295660.1	KEGG: nmu:Nmul_A1051 RNA polymerase factor sigma-70; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2
YP_004295661.1	KEGG: nmu:Nmul_A1052 hypothetical protein
YP_004295662.1	PFAM: Protein of unknown function DUF3106; KEGG: nmu:Nmul_A1053 hypothetical protein
YP_004295663.1	PFAM: ABC transporter, transmembrane domain; ABC transporter-like; KEGG: nmu:Nmul_A2254 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004295664.1	PFAM: Domain of unknown function DUF1854; KEGG: app:CAP2UW1_3889 hypothetical protein
YP_004295665.1	PFAM: Uncharacterised protein family UPF0027; KEGG: rsl:RPSI07_3186 hypothetical protein
YP_004295666.1	PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase
YP_004295667.1	KEGG: net:Neut_2155 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related
YP_004295668.1	KEGG: neu:NE0387 60Kd inner membrane protein; TIGRFAM: Membrane insertion protein, OxaA/YidC, bacterial; Membrane insertion protein, OxaA/YidC; PFAM: Membrane insertion protein, OxaA/YidC
YP_004295669.1	PFAM: Ribonuclease P; manually curated; TIGRFAM: Ribonuclease P; KEGG: net:Neut_2152 ribonuclease P protein component; HAMAP: Ribonuclease P
YP_004295670.1	KEGG: tmz:Tmz1t_2334 50S ribosomal protein L34; TIGRFAM: Ribosomal protein L34; PFAM: Ribosomal protein L34
YP_004295671.1	KEGG: net:Neut_1510 exodeoxyribonuclease VII large subunit; TIGRFAM: Exonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type
YP_004295672.1	PFAM: Protein of unknown function DUF423; KEGG: nmu:Nmul_A1031 hypothetical protein
YP_004295673.1	KEGG: nmu:Nmul_A0729 hypothetical protein
YP_004295674.1	PFAM: Disulphide bond formation protein DsbB/BdbC; KEGG: net:Neut_1513 disulphide bond formation protein DsbB
YP_004295675.1	KEGG: nmu:Nmul_A0748 tyrosine recombinase XerD; TIGRFAM: Tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage
YP_004295676.1	KEGG: nmu:Nmul_A0747 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding
YP_004295677.1	KEGG: amr:AM1_6172 IS5 family transposase
YP_004295678.1	TIGRFAM: NAD(P)H-quinone oxidoreductase, subunit N/subunit 2; KEGG: neu:NE1764 NADH dehydrogenase subunit N; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase
YP_004295679.1	TIGRFAM: NADH-quinone oxidoreductase, chain M/4; KEGG: nmu:Nmul_A1103 NADH dehydrogenase subunit M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 4, N-terminal
YP_004295680.1	TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; KEGG: nmu:Nmul_A1102 proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; NADH dehydrogenase subunit 5, C-terminal
YP_004295681.1	KEGG: net:Neut_0932 NADH dehydrogenase subunit K; HAMAP: NADH-ubiquinone oxidoreductase chain 4L/K; PFAM: NADH-ubiquinone oxidoreductase chain 4L/K
YP_004295682.1	PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: nmu:Nmul_A1100 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
YP_004295683.1	TIGRFAM: NADH-quinone oxidoreductase, chain I; KEGG: net:Neut_0930 NADH dehydrogenase subunit I; PFAM: 4Fe-4S binding domain
YP_004295684.1	KEGG: neu:NE1770 respiratory-chain NADH dehydrogenase subunit 1; PFAM: NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H
YP_004295685.1	SMART: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Molybdopterin oxidoreductase, Fe4S4 domain; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit G; KEGG: nmu:Nmul_A1097 NADH dehydrogenase subunit G; PFAM: Molybdopterin oxidoreductase; Ferredoxin; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
YP_004295686.1	SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; TIGRFAM: NADH ubiquinone oxidoreductase, F subunit; KEGG: neu:NE1772 respiratory-chain NADH dehydrogenase 51 Kd subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain
YP_004295687.1	TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: neu:NE1773 NADH dehydrogenase subunit E; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit
YP_004295688.1	TIGRFAM: NADH dehydrogenase I, subunit D; KEGG: nmu:Nmul_A1094 NADH dehydrogenase subunit D; PFAM: NADH-quinone oxidoreductase, subunit D
YP_004295689.1	KEGG: neu:NE1775 NADH dehydrogenase subunit C; TIGRFAM: NADH dehydrogenase, subunit C; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit
YP_004295690.1	TIGRFAM: NADH-ubiquinone oxidoreductase, 20 Kd subunit; KEGG: neu:NE1776 NADH dehydrogenase subunit B; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit
YP_004295691.1	manually curated; HAMAP: NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid; KEGG: nmu:Nmul_A1091 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
YP_004295692.1	PFAM: Preprotein translocase SecG subunit; KEGG: neu:NE1778 preprotein translocase subunit SecG
YP_004295693.1	TIGRFAM: Triosephosphate isomerase; KEGG: nmu:Nmul_A1089 triosephosphate isomerase; PFAM: Triosephosphate isomerase
YP_004295694.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphate transport system permease protein 1; KEGG: nmu:Nmul_A1088 phosphate ABC transporter ATP-binding protein; PFAM: ABC transporter-like
YP_004295695.1	KEGG: nmu:Nmul_A1087 phosphate ABC transporter permease; TIGRFAM: Phosphate transport system permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004295696.1	KEGG: nmu:Nmul_A1086 phosphate ABC transporter permease; TIGRFAM: Phosphate ABC transporter, permease protein PstC; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004295697.1	PFAM: NapC/NirT cytochrome c, N-terminal; KEGG: neu:NE2336 putative tetraheme C-cytochrome
YP_004295698.1	KEGG: neu:NE2337 cytochrome c-554 precursor
YP_004295699.1	KEGG: nmu:Nmul_A2661 hypothetical protein
YP_004295700.1	KEGG: neu:NE2339 hydroxylamine oxidoreductase
YP_004295701.1	KEGG: neu:NE0183 hypothetical protein
YP_004295702.1	SMART: Histidine phosphatase superfamily, clade-1; TIGRFAM: Phosphoglycerate mutase 1; KEGG: neu:NE1780 phosphoglyceromutase; PFAM: Histidine phosphatase superfamily, clade-1
YP_004295703.1	KEGG: nmu:Nmul_A1120 peptidase M23B; manually curated; PFAM: Peptidase M23
YP_004295704.1	TIGRFAM: Peptidase S41A, C-terminal peptidase; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: neu:NE1782 carboxy-terminal processing protease; SMART: Peptidase S41; PDZ/DHR/GLGF
YP_004295705.1	PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; KEGG: neu:NE1783 NAD binding site:UBA/ThiF-type NAD/FAD binding fold
YP_004295706.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nmu:Nmul_A1117 nucleoid occlusion protein
YP_004295707.1	KEGG: vpo:Kpol_1041p41 hypothetical protein
YP_004295708.1	KEGG: tga:TGAM_1426 DNA topoisomerase VI subunit A
YP_004295709.1	KEGG: mkm:Mkms_0973 acyltransferase 3
YP_004295710.1	KEGG: vsp:VS_II0451 hypothetical protein
YP_004295711.1	KEGG: pna:Pnap_3867 hypothetical protein
YP_004295712.1	KEGG: neu:NE0971 hypothetical protein
YP_004295713.1	PFAM: Small multidrug resistance protein; KEGG: gsu:GSU0707 SugE protein
YP_004295714.1	KEGG: rhi:NGR_a03200 hypothetical 47.1 kDa protein
YP_004295715.1	TIGRFAM: Glycogen/starch synthases, ADP-glucose type; KEGG: net:Neut_0608 glycogen/starch synthases, ADP-glucose type; PFAM: Starch synthase, catalytic domain; Glycosyl transferase, group 1
YP_004295716.1	KEGG: neu:NE2263 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI)
YP_004295717.1	KEGG: neu:NE2032 glycosy hydrolase family protein; PFAM: Alpha-amylase/4-alpha-glucanotransferase, C-terminal; Alpha-amylase/4-alpha-glucanotransferase, central domain; Glycoside hydrolase, family 57, N-terminal
YP_004295718.1	PFAM: Glycoside hydrolase, family 57, N-terminal; KEGG: nmu:Nmul_A0719 glycoside hydrolase family protein
YP_004295719.1	TIGRFAM: Glucose-1-phosphate adenylyltransferase; KEGG: neu:NE2030 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase
YP_004295720.1	TIGRFAM: 1,4-alpha-glucan-branching enzyme; KEGG: net:Neut_1291 glycogen branching enzyme; PFAM: Glycoside hydrolase, family 13, N-terminal; Alpha-amylase, C-terminal all beta; Glycosyl hydrolase, family 13, catalytic domain
YP_004295721.1	PFAM: Small multidrug resistance protein; KEGG: dal:Dalk_0650 small multidrug resistance protein
YP_004295722.1	PFAM: PEP-CTERM bacterial; KEGG: mei:Msip34_1313 protein of unknown function DUF1555
YP_004295723.1	KEGG: hba:Hbal_1382 SmpA/OmlA domain protein
YP_004295724.1	KEGG: nmu:Nmul_A1140 hypothetical protein
YP_004295725.1	KEGG: cja:CJA_3563 hypothetical protein
YP_004295726.1	PFAM: Cytochrome P450; KEGG: xau:Xaut_0387 cytochrome P450
YP_004295727.1	KEGG: ppr:PBPRB1378 hypothetical protein
YP_004295728.1	KEGG: mxa:MXAN_7123 sensor histidine kinase
YP_004295729.1	SMART: Cyclic nucleotide-binding domain; KEGG: rfr:Rfer_1647 CRP/FNR family transcriptional regulator
YP_004295730.1	KEGG: mta:Moth_0961 ABC-type transport system involved in multi-copper enzyme maturation, permease component
YP_004295731.1	PFAM: Protein of unknown function DUF883, ElaB; KEGG: pbr:PB2503_10114 hypothetical protein
YP_004295732.1	PFAM: Uncharacterised protein family UPF0118; KEGG: mmb:Mmol_2085 protein of unknown function UPF0118
YP_004295733.1	PFAM: Catalase-related subgroup; KEGG: abb:ABBFA_001723 hypothetical protein
YP_004295734.1	PFAM: Integral membrane protein TerC; KEGG: nde:NIDE3790 membrane protein TerC
YP_004295735.1	KEGG: geo:Geob_3784 hypothetical protein
YP_004295736.1	KEGG: sfr:Sfri_2036 hypothetical protein
YP_004295737.1	KEGG: net:Neut_2358 hypothetical protein
YP_004295738.1	PFAM: CsbD-like; KEGG: net:Neut_2359 CsbD family protein
YP_004295739.1	KEGG: net:Neut_2360 hypothetical protein; HAMAP: Protein of unknown function DUF1328; PFAM: Protein of unknown function DUF1328
YP_004295740.1	PFAM: CsbD-like; KEGG: net:Neut_2359 CsbD family protein
YP_004295741.1	KEGG: pva:Pvag_0471 uncharacterized protein YohN precursor
YP_004295742.1	KEGG: mea:Mex_1p1410 hypothetical protein
YP_004295743.1	PFAM: Protein of unknown function DUF1597; KEGG: nmu:Nmul_A0438 hypothetical protein
YP_004295744.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: mca:MCA2115 transglycosylase SLT domain-containing protein
YP_004295745.1	KEGG: tgr:Tgr7_0333 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain
YP_004295746.1	PFAM: Protein of unknown function DUF2798; KEGG: jan:Jann_0888 hypothetical protein
YP_004295747.1	SMART: Exonuclease; TIGRFAM: DNA polymerase 3, epsilon subunit; DNA polymerase III, epsilon subunit; KEGG: net:Neut_2175 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III
YP_004295748.1	KEGG: nmu:Nmul_A1619 ribonuclease H; PFAM: Ribonuclease H domain
YP_004295749.1	PFAM: Methyltransferase type 11; KEGG: nmu:Nmul_A1620 generic methyl-transferase
YP_004295750.1	SMART: Beta-lactamase-like; TIGRFAM: Hydroxyacylglutathione hydrolase; KEGG: neu:NE0138 metallo-beta-lactamase superfamily protein; PFAM: Beta-lactamase-like
YP_004295751.1	PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; HAMAP: Glutaminyl-tRNA synthetase, bacterial; KEGG: nmu:Nmul_A2083 glutaminyl-tRNA synthetase
YP_004295752.1	KEGG: net:Neut_0762 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13
YP_004295753.1	KEGG: neu:NE1483 30S ribosomal protein S9; manually curated; PFAM: Ribosomal protein S9
YP_004295754.1	SMART: Semialdehyde dehydrogenase, NAD-binding; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; KEGG: neu:NE1482 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation domain
YP_004295755.1	KEGG: neu:NE1481 hypothetical protein
YP_004295756.1	PFAM: Protein of unknown function DUF583; KEGG: slt:Slit_2453 protein of unknown function DUF583
YP_004295757.1	KEGG: nmu:Nmul_A0556 HesB/YadR/YfhF; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis
YP_004295758.1	PFAM: Anhydro-N-acetylmuramic acid kinase; KEGG: neu:NE1429 anhydro-N-acetylmuramic acid kinase
YP_004295759.1	PFAM: Peptidase M23; KEGG: neu:NE1430 M23/M37 familypeptidase
YP_004295760.1	KEGG: nmu:Nmul_A0502 tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; RNA-binding S4; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib; HAMAP: Tyrosyl-tRNA synthetase, class Ib; SMART: RNA-binding S4
YP_004295761.1	KEGG: nmu:Nmul_A1799 DEAD/DEAH box helicase-like; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004295762.1	KEGG: cch:Cag_0532 hypothetical protein
YP_004295763.1	TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; PAS fold; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: npu:Npun_F3797 multi-sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; PAC motif
YP_004295764.1	KEGG: cpi:Cpin_3979 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal
YP_004295765.1	PFAM: Diacylglycerol kinase, catalytic domain; KEGG: mpt:Mpe_A2183 hypothetical protein
YP_004295766.1	PFAM: Metallo-dependent phosphatase; KEGG: mpt:Mpe_A2182 putative DNA repair exonuclease
YP_004295767.1	KEGG: nmu:Nmul_A2766 ammonia monooxygenase/methane monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C
YP_004295768.1	KEGG: nmu:Nmul_A1398 hypothetical protein
YP_004295769.1	KEGG: net:Neut_2282 proline-rich region
YP_004295770.1	KEGG: neu:NE0773 malate dehydrogenase; TIGRFAM: Malate dehydrogenase, NAD/NADP; PFAM: Lactate/malate dehydrogenase, C-terminal; Lactate/malate dehydrogenase, N-terminal
YP_004295771.1	KEGG: hch:HCH_02605 membrane-bound lytic murein transglycosylase B; TIGRFAM: Lytic murein transglycosylase; PFAM: Peptidoglycan binding-like
YP_004295772.1	PFAM: Ferric-uptake regulator; KEGG: neu:NE0616 leucine-rich repeat-containing ferric uptake regulator
YP_004295773.1	PFAM: Lipoprotein SmpA/OmlA; KEGG: nmu:Nmul_A0476 SmpA/OmlA
YP_004295774.1	TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; KEGG: net:Neut_1940 dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase, C-terminal; Dihydrodipicolinate reductase, N-terminal
YP_004295775.1	PFAM: Metallo-dependent phosphatase; TIGRFAM: Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); KEGG: nmu:Nmul_A0206 diadenosine tetraphosphatase; HAMAP: Bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
YP_004295776.1	KEGG: neu:NE0612 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_004295777.1	PFAM: Domain of unknown function DUF190; KEGG: tal:Thal_0656 nitrogen regulatory protein P-II
YP_004295778.1	PFAM: Protein of unknown function DUF897; KEGG: tkm:TK90_0845 protein of unknown function DUF897
YP_004295779.1	KEGG: nmu:Nmul_A0707 periplasmic sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004295780.1	KEGG: nmu:Nmul_A0706 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004295781.1	TIGRFAM: Uroporphyrinogen decarboxylase HemE; KEGG: nmu:Nmul_A0705 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D)
YP_004295782.1	KEGG: psa:PST_1428 lipoprotein
YP_004295783.1	TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; KEGG: nmu:Nmul_A0704 deoxyguanosinetriphosphate triphosphohydrolase-like protein; SMART: Metal-dependent phosphohydrolase, HD domain
YP_004295784.1	PFAM: 3-dehydroquinate synthase AroB; Shikimate kinase; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; HAMAP: Shikimate kinase; 3-dehydroquinate synthase AroB, subgroup; KEGG: slt:Slit_0113 3-dehydroquinate synthase
YP_004295785.1	TIGRFAM: Conserved hypothetical protein CHP03032; KEGG: npu:Npun_F1456 hypothetical protein
YP_004295786.1	PFAM: FG-GAP; Haemolysin-type calcium-binding repeat; KEGG: syf:Synpcc7942_1337 integrins alpha chain
YP_004295787.1	KEGG: nmu:Nmul_A1625 hypothetical protein
YP_004295788.1	KEGG: syc:syc0216_c hypothetical protein; PFAM: FG-GAP; Haemolysin-type calcium-binding repeat; SMART: Integrin alpha beta-propellor
YP_004295789.1	PFAM: FG-GAP; KEGG: npu:Npun_F4869 putative outer membrane adhesin like proteiin
YP_004295790.1	KEGG: ppr:PBPRB1378 hypothetical protein
YP_004295791.1	KEGG: syf:Synpcc7942_1337 integrins alpha chain; PFAM: FG-GAP; Haemolysin-type calcium-binding repeat; SMART: Integrin alpha beta-propellor
YP_004295792.1	KEGG: nmu:Nmul_A1625 hypothetical protein
YP_004295793.1	KEGG: npu:Npun_R5402 FG-GAP repeat-containing protein; PFAM: FG-GAP; SMART: Integrin alpha beta-propellor
YP_004295794.1	KEGG: syf:Synpcc7942_1337 integrins alpha chain; PFAM: FG-GAP; Haemolysin-type calcium-binding repeat; SMART: Integrin alpha beta-propellor
YP_004295795.1	KEGG: syf:Synpcc7942_1337 integrins alpha chain; PFAM: FG-GAP; SMART: Integrin alpha beta-propellor
YP_004295796.1	KEGG: syf:Synpcc7942_1337 integrins alpha chain; PFAM: Haemolysin-type calcium-binding repeat; FG-GAP; SMART: Integrin alpha beta-propellor
YP_004295797.1	KEGG: syf:Synpcc7942_1337 integrins alpha chain; PFAM: FG-GAP; Haemolysin-type calcium-binding repeat; SMART: Integrin alpha beta-propellor
YP_004295798.1	KEGG: nmu:Nmul_A0691 hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004295799.1	KEGG: nmu:Nmul_A0692 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004295800.1	KEGG: lac:LBA0839 competence protein
YP_004295801.1	PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 1; KEGG: net:Neut_1872 multicopper oxidase, type 3
YP_004295802.1	PFAM: Multicopper oxidase, type 2; KEGG: net:Neut_1873 hypothetical protein
YP_004295803.1	KEGG: nde:NIDE3458 hypothetical protein
YP_004295804.1	PFAM: Protein of unknown function DUF3467; KEGG: nde:NIDE3458 hypothetical protein
YP_004295805.1	KEGG: cyj:Cyan7822_0595 Na-Ca exchanger/integrin-beta4
YP_004295806.1	KEGG: pna:Pnap_3396 DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal
YP_004295807.1	KEGG: gpb:HDN1F_35800 hypothetical protein; PFAM: YkuD domain; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_004295808.1	KEGG: nmu:Nmul_A2166 peptidase T2, asparaginase 2; PFAM: Peptidase T2, asparaginase 2
YP_004295809.1	KEGG: nde:NIDE0147 putative polyphosphate kinase 2; TIGRFAM: Polyphosphate:nucleotide phosphotransferase, PPK2; PFAM: Polyphosphate kinase-2-related
YP_004295810.1	KEGG: mms:mma_1926 hypothetical protein; PFAM: CHAD; Adenylate cyclase; SMART: CHAD
YP_004295811.1	PFAM: E3 Ubiquitin ligase; KEGG: neu:NE0281 hypothetical protein
YP_004295812.1	PFAM: LemA; KEGG: neu:NE0282 hypothetical protein
YP_004295813.1	KEGG: scl:sce1971 putative lipoprotein
YP_004295814.1	KEGG: hba:Hbal_2037 hypothetical protein
YP_004295815.1	KEGG: net:Neut_2609 hypothetical protein
YP_004295816.1	KEGG: net:Neut_2610 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding domain
YP_004295817.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold; Diguanylate cyclase, predicted; KEGG: meh:M301_2309 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif; GAF
YP_004295818.1	PFAM: SirA-like; KEGG: nmu:Nmul_A1011 SirA-like
YP_004295819.1	KEGG: psa:PST_0436 L-lactate permease, putative; TIGRFAM: L-lactate permease; PFAM: L-lactate permease
YP_004295820.1	KEGG: kla:KLLA0F10912g hypothetical protein
YP_004295821.1	PFAM: Protein of unknown function DUF457, transmembrane; KEGG: nhl:Nhal_0110 membrane-bound metal-dependent hydrolase
YP_004295822.1	KEGG: neu:NE1299 guanylate cyclase; PFAM: CHASE2; Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase
YP_004295823.1	PFAM: FecR protein; TonB-dependent receptor, beta-barrel; KEGG: neu:NE1298 TPR repeat-containing protein
YP_004295824.1	KEGG: mdo:100025864 similar to gag protein
YP_004295825.1	PFAM: TonB-dependent receptor, beta-barrel; FecR protein; Tetratricopeptide TPR2; KEGG: neu:NE1298 TPR repeat-containing protein
YP_004295826.1	KEGG: ptm:GSPATT00005658001 hypothetical protein
YP_004295827.1	KEGG: cur:cur_1585 putative secretory lipase
YP_004295828.1	KEGG: nmu:Nmul_A0675 aminotransferase, class V; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_004295829.1	PFAM: Nucleotidyl transferase; KEGG: nmu:Nmul_A0425 nucleotidyl transferase
YP_004295830.1	KEGG: neu:NE0176 hypothetical protein
YP_004295831.1	PFAM: Fatty acid desaturase, type 1; KEGG: nmu:Nmul_A0268 fatty acid desaturase
YP_004295832.1	SMART: Histidine phosphatase superfamily, clade-1; TIGRFAM: Phosphoglycerate mutase 1; KEGG: nmu:Nmul_A0422 phosphoglycerate mutase 1 family protein; PFAM: Histidine phosphatase superfamily, clade-1
YP_004295833.1	manually curated; KEGG: tau:Tola_2812 T/U mismatch-specific DNA glycosylase
YP_004295834.1	PFAM: VanZ-like; KEGG: dat:HRM2_25480 hypothetical protein
YP_004295835.1	PFAM: DNA methylase N-4/N-6; KEGG: sat:SYN_02042 DNA modification methylase
YP_004295836.1	PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit
YP_004295837.1	PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein
YP_004295838.1	KEGG: mmb:Mmol_1152 hypothetical protein
YP_004295839.1	PFAM: Protein of unknown function DUF454; KEGG: nmu:Nmul_A0750 hypothetical protein
YP_004295840.1	KEGG: neu:NE0079 FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase); PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_004295841.1	PFAM: Protein of unknown function DUF748; KEGG: nmu:Nmul_A2679 hypothetical protein
YP_004295842.1	KEGG: neu:NE1746 fimbrial protein pilin
YP_004295843.1	PFAM: PilC domain; KEGG: net:Neut_1833 putative type 4 fimbrial biogenesis protein PilY1
YP_004295844.1	KEGG: neu:NE1748 hypothetical protein
YP_004295845.1	KEGG: reu:Reut_A0785 putative Tfp pilus assembly protein PilW
YP_004295846.1	TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG: noc:Noc_2271 type IV fimbrial biogenesis protein PilV
YP_004295847.1	PFAM: General secretion pathway, GspH; Prepilin-type cleavage/methylation, N-terminal; KEGG: neu:NE1751 putative type-4 fimbrial pilin related signal peptide protein
YP_004295848.1	TIGRFAM: Glycine oxidase ThiO; KEGG: neu:NE0650 NAD binding site:D-amino acid oxidase; PFAM: FAD dependent oxidoreductase
YP_004295849.1	TIGRFAM: LytB protein; KEGG: net:Neut_1903 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein
YP_004295850.1	KEGG: nmu:Nmul_A0091 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA
YP_004295851.1	KEGG: nmu:Nmul_A0008 periplasmic sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004295852.1	KEGG: net:Neut_1251 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain
YP_004295853.1	TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: nmu:Nmul_A0006 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding
YP_004295854.1	KEGG: nmu:Nmul_A0005 transcriptional regulator NrdR; TIGRFAM: Ribonucleotide reductase regulator NrdR-like; PFAM: ATP-cone
YP_004295855.1	KEGG: nmu:Nmul_A0004 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase
YP_004295856.1	PFAM: Glutamine amidotransferase class-I, C-terminal; KEGG: nmu:Nmul_A1045 glutamine amidotransferase class-I
YP_004295857.1	PFAM: Protein of unknown function DUF2868; KEGG: net:Neut_1033 hypothetical protein
YP_004295858.1	PFAM: Protein of unknown function DUF3482; GTP-binding protein, HSR1-related; KEGG: net:Neut_1034 GTP-binding protein, HSR1-related
YP_004295860.1	KEGG: lcr:LCRIS_00177 S-layer protein
YP_004295861.1	PFAM: Peptidase, membrane zinc metallopeptidase, putative; KEGG: aeh:Mlg_1818 peptidase, membrane zinc metallopeptidase, putative
YP_004295862.1	KEGG: neu:NE1611 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal
YP_004295863.1	PFAM: Type II secretion system F domain; KEGG: nmu:Nmul_A2589 type II secretion system protein
YP_004295864.1	PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: net:Neut_0508 type II secretion system protein E
YP_004295865.1	KEGG: nmu:Nmul_A2587 hypothetical protein
YP_004295866.1	KEGG: net:Neut_0510 fimbrial assembly family protein
YP_004295867.1	KEGG: nmu:Nmul_A2585 transmembrane protein
YP_004295868.1	KEGG: net:Neut_0512 putative prolin-rich transmembrane protein
YP_004295869.1	KEGG: net:Neut_0513 type II and III secretion system protein; PFAM: Type II/III secretion system; Secretin/TonB, short N-terminal; SMART: Secretin/TonB, short N-terminal
YP_004295870.1	KEGG: neu:NE1603 putative general secretion pathway GspG related transmembrane protein
YP_004295871.1	PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal; KEGG: nmu:Nmul_A2581 N-terminal methylation site
YP_004295872.1	KEGG: net:Neut_0516 putative transmembrane protein
YP_004295873.1	PFAM: Endoribonuclease L-PSP; KEGG: net:Neut_1514 endoribonuclease L-PSP
YP_004295874.1	KEGG: net:Neut_1887 exonuclease I; PFAM: Exonuclease C-terminal; Exonuclease, RNase T/DNA polymerase III
YP_004295875.1	TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: neu:NE0965 twitching mobility protein; SMART: ATPase, AAA+ type, core
YP_004295876.1	TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: net:Neut_2337 twitching motility protein; SMART: ATPase, AAA+ type, core
YP_004295877.1	KEGG: ddi:DDB_G0292664 hypothetical protein
YP_004295879.1	TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Phosphoesterase, DHHA1; Threonyl/alanyl tRNA synthetase, SAD; KEGG: nmu:Nmul_A0022 alanyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase, SAD
YP_004295880.1	KEGG: nmu:Nmul_A0021 hypothetical protein
YP_004295881.1	KEGG: neu:NE1931 RecX regulatory protein; HAMAP: Regulatory protein RecX; PFAM: Regulatory protein RecX
YP_004295882.1	TIGRFAM: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA; KEGG: neu:NE1932 recombinase A; SMART: ATPase, AAA+ type, core
YP_004295883.1	TIGRFAM: Adenylate kinase, subfamily; HAMAP: Adenylate kinase; KEGG: nmu:Nmul_A0741 adenylate kinase; PFAM: Adenylate kinase; Adenylate kinase, active site lid domain
YP_004295884.1	PFAM: Phosphofructokinase domain; KEGG: neu:NE1934 6-phosphofructokinase
YP_004295885.1	TIGRFAM: Pyrophosphate-energised proton pump; KEGG: neu:NE1935 membrane-bound proton-translocating pyrophosphatase; PFAM: Pyrophosphate-energised proton pump
YP_004295886.1	PFAM: Protein of unknown function DUF299, phosphotransferase, predicted; KEGG: neu:NE2365 hypothetical protein
YP_004295887.1	TIGRFAM: Phosphoenolpyruvate synthase; KEGG: neu:NE2366 phosphoenolpyruvate synthase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme; PEP-utilising enzyme, mobile domain
YP_004295888.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: slt:Slit_0984 transcriptional regulator, LysR family
YP_004295889.1	KEGG: nwa:Nwat_2772 ribulose-bisphosphate carboxylase; PFAM: Ribulose bisphosphate carboxylase, large subunit, C-terminal; Ribulose bisphosphate carboxylase, large subunit, N-terminal
YP_004295890.1	PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: nmu:Nmul_A0685 ribulose-bisphosphate carboxylase; SMART: Ribulose bisphosphate carboxylase, small chain
YP_004295891.1	TIGRFAM: CbxX/CfqX, monofunctional; PFAM: ATPase, AAA-type, core; KEGG: nmu:Nmul_A0684 AAA ATPase, central region; SMART: ATPase, AAA+ type, core
YP_004295892.1	KEGG: nhl:Nhal_3445 hypothetical protein
YP_004295893.1	TIGRFAM: Ketose-bisphosphate aldolase, class-II; KEGG: slt:Slit_0992 ketose-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II
YP_004295894.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: net:Neut_2403 OmpA/MotB domain-containing protein
YP_004295895.1	KEGG: nmg:Nmag_1146 alcohol dehydrogenase GroES domain protein
YP_004295896.1	KEGG: vei:Veis_1232 CRISPR-associated Cas2 family protein; TIGRFAM: CRISPR associated protein Cas2; PFAM: Virulence-associated protein D / CRISPR associated protein Cas2
YP_004295897.1	PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase
YP_004295898.1	TIGRFAM: CRISPR-associated protein, SAG0894; KEGG: vei:Veis_1230 CRISPR-associated endonuclease Csn1 family protein
YP_004295899.1	KEGG: bge:BC1002_4059 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain
YP_004295900.1	PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit
YP_004295901.1	PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region
YP_004295902.1	PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein
YP_004295903.1	KEGG: ptm:GSPATT00021173001 hypothetical protein
YP_004295904.1	KEGG: neu:NE2218 hypothetical protein
YP_004295905.1	KEGG: syx:SynWH7803_0111 atypical alkaline phosphatase with phytase-like insertion
YP_004295906.1	KEGG: nmu:Nmul_A1899 multicopper oxidase type 1
YP_004295907.1	KEGG: cai:Caci_8228 hypothetical protein
YP_004295908.1	KEGG: rfr:Rfer_1747 hypothetical protein
YP_004295909.1	KEGG: ppf:Pput_1226 hypothetical protein
YP_004295910.1	KEGG: eba:ebA177 hypothetical protein
YP_004295911.1	TIGRFAM: Putative agmatinase; KEGG: net:Neut_1437 agmatinase; PFAM: Ureohydrolase
YP_004295912.1	KEGG: mca:MCA2972 lipoprotein A domain-containing protein; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Barwin-related endoglucanase
YP_004295913.1	KEGG: neu:NE1296 cAMP-dependent protein kinase; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain
YP_004295914.1	KEGG: nmu:Nmul_A2509 LolC/E family lipoprotein releasing system, transmembrane protein; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Domain of unknown function DUF214, ABC transporter permease
YP_004295915.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Lipoprotein releasing system, ATP-binding protein; KEGG: nmu:Nmul_A2508 lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter-like
YP_004295916.1	PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: neu:NE1613 ABC transporter permease/ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004295917.1	PFAM: Uncharacterised conserved protein UCP025560; KEGG: cte:CT1722 hypothetical protein
YP_004295918.1	KEGG: cte:CT1723 hypothetical protein
YP_004295919.1	PFAM: Dicarboxylate transport; KEGG: azl:AZL_014360 hypothetical protein
YP_004295920.1	PFAM: Guanylate kinase; KEGG: wsu:WS0188 guanylate kinase
YP_004295921.1	KEGG: nmu:Nmul_A0026 major facilitator transporter
YP_004295922.1	PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: gca:Galf_2042 peroxiredoxin
YP_004295923.1	KEGG: nmu:Nmul_A0025 TraR/DksA family transcriptional regulator
YP_004295924.1	KEGG: nmu:Nmul_A0024 Smr protein/MutS2-like; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal
YP_004295925.1	TIGRFAM: Thioredoxin reductase; KEGG: nmu:Nmul_A0023 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004295926.1	KEGG: cyc:PCC7424_2988 intradiol ring-cleavage dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal
YP_004295927.1	KEGG: app:CAP2UW1_2168 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial
YP_004295929.1	KEGG: tye:THEYE_A0608 tetratricopeptide repeat domain protein
YP_004295930.1	KEGG: nmu:Nmul_A0389 two component, sigma54 specific, fis family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain
YP_004295931.1	KEGG: net:Neut_0388 periplasmic sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS
YP_004295932.1	KEGG: nmu:Nmul_A0391 proline rich signal peptide protein
YP_004295933.1	KEGG: nmu:Nmul_A0392 sun protein; TIGRFAM: Fmu, rRNA SAM-dependent methyltransferase; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44
YP_004295934.1	TIGRFAM: Methionyl-tRNA formyltransferase; KEGG: nmu:Nmul_A0393 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal
YP_004295935.1	KEGG: nmu:Nmul_A0394 peptide deformylase; TIGRFAM: Formylmethionine deformylase; PFAM: Formylmethionine deformylase
YP_004295936.1	KEGG: neu:NE1969 LysM motif-containing protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_004295937.1	KEGG: nmu:Nmul_A0395 DNA processing protein DprA, putative; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A
YP_004295938.1	PFAM: Protein of unknown function DUF494; KEGG: net:Neut_0395 hypothetical protein
YP_004295939.1	SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain; TIGRFAM: DNA topoisomerase III, bacterial-type; KEGG: nmu:Nmul_A0396 DNA topoisomerase III; PFAM: DNA topoisomerase, type IA, central; Toprim domain
YP_004295940.1	KEGG: nmu:Nmul_A0399 hypothetical protein
YP_004295941.1	TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; KEGG: net:Neut_0398 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: Enolpyruvate transferase domain
YP_004295942.1	KEGG: nmu:Nmul_A2070 cytidylate kinase; TIGRFAM: Cytidylate kinase; PFAM: Cytidylate kinase domain
YP_004295943.1	TIGRFAM: Ribosomal S1 synthesis/modification protein; PFAM: Ribosomal protein S1, RNA-binding domain; KEGG: nmu:Nmul_A2069 30S ribosomal protein S1; SMART: RNA-binding domain, S1
YP_004295944.1	TIGRFAM: Integration host factor, beta subunit; PFAM: Histone-like bacterial DNA-binding protein; KEGG: nmu:Nmul_A2068 integration host factor, beta subunit; SMART: Histone-like bacterial DNA-binding protein
YP_004295945.1	PFAM: Protein of unknown function DUF1049; KEGG: rme:Rmet_0724 hypothetical protein
YP_004295946.1	SMART: Orotidine 5'-phosphate decarboxylase domain; TIGRFAM: Orotidine 5'-phosphate decarboxylase; KEGG: nmu:Nmul_A2066 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase domain
YP_004295947.1	KEGG: rru:Rru_B0037 hemolysin-type calcium-binding region
YP_004295948.1	manually curated; KEGG: avn:Avin_15960 ABC-2 transporter, permease component
YP_004295949.1	PFAM: ABC transporter-like; KEGG: mca:MCA2549 efflux ABC transporter, ATP-binding protein, putative; SMART: ATPase, AAA+ type, core
YP_004295950.1	KEGG: mca:MCA2548 hypothetical protein
YP_004295951.1	PFAM: Glycosyl transferase, group 1; KEGG: tit:Thit_0644 glycosyl transferase group 1
YP_004295952.1	PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: swo:Swol_2445 hypothetical protein
YP_004295953.1	PFAM: Haloacid dehalogenase-like hydrolase; KEGG: gpb:HDN1F_01080 hypothetical protein
YP_004295954.1	KEGG: amr:AM1_6172 IS5 family transposase
YP_004295955.1	PFAM: Ribosome biogenesis GTPase RsgA, putative; manually curated; TIGRFAM: Ribosome biogenesis GTPase RsgA, putative; KEGG: nmu:Nmul_A0711 GTPase EngC; HAMAP: Ribosome biogenesis GTPase RsgA, putative
YP_004295956.1	PFAM: Transcriptional coactivator/pterin dehydratase; KEGG: nmu:Nmul_A0712 pterin-4-alpha-carbinolamine dehydratase
YP_004295957.1	KEGG: neu:NE0076 M48 family peptidase; PFAM: Peptidase M48
YP_004295958.1	KEGG: neu:NE0075 oligoribonuclease; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease
YP_004295959.1	KEGG: nmu:Nmul_A1009 calcium-binding EF-hand
YP_004295960.1	KEGG: nmu:Nmul_A2737 peptidase M16-like; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal
YP_004295961.1	TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: net:Neut_1529 signal recognition particle-docking protein FtsY; SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core
YP_004295962.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Cell division ATP-binding protein FtsE; KEGG: neu:NE1414 ABC transporter ATPase; PFAM: ABC transporter-like
YP_004295963.1	PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: net:Neut_1527 hypothetical protein
YP_004295964.1	KEGG: nmu:Nmul_A2741 RNA polymerase factor sigma-32; TIGRFAM: RNA polymerase sigma factor RpoH, proteobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 1.2
YP_004295965.1	PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region
YP_004295966.1	PFAM: Transposase IS3/IS911family; KEGG: rms:RMA_0745 transposase
YP_004295967.1	KEGG: tet:TTHERM_00266730 Viral A-type inclusion protein repeat containing protein
YP_004295968.1	KEGG: tko:TK2070 cytosolic NiFe-hydrogenase, delta subunit
YP_004295969.1	PFAM: Mor transcription activator; KEGG: dac:Daci_1325 hypothetical protein
YP_004295971.1	KEGG: gvi:gsr0356 hypothetical protein; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Uncharacterised protein family UPF0156/MetJ /Arc repressor
YP_004295972.1	PFAM: Plasmid stabilisation system; KEGG: gvi:glr0357 hypothetical protein
YP_004295974.1	PFAM: IstB-like ATP-binding protein; Integrase, catalytic core; KEGG: mms:mma_2809 transposase IstA
YP_004295975.1	PFAM: Plasmid stabilisation system; KEGG: rec:RHECIAT_PC0000823 probable plasmid stabilization protein
YP_004295976.1	PFAM: Antitoxin ParD; KEGG: rec:RHECIAT_PC0000824 probable plasmid stabilization protein
YP_004295977.1	KEGG: pyo:PY05266 hypothetical protein
YP_004295978.1	PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region
YP_004295979.1	KEGG: dde:Dde_3407 ISGsu6, transposase OrfA
YP_004295980.1	PFAM: CopG-like DNA-binding; KEGG: nhl:Nhal_0318 CopG domain protein DNA-binding domain protein
YP_004295981.1	KEGG: nhl:Nhal_0317 addiction module toxin, RelE/StbE family; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system
YP_004295982.1	KEGG: tmz:Tmz1t_3172 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004295983.1	PFAM: Transposase (putative), IS66 Orf2-like; KEGG: eba:ebB55 transposase, fragment
YP_004295984.1	PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase
YP_004295985.1	KEGG: tmz:Tmz1t_3172 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004295986.1	KEGG: nhl:Nhal_0317 addiction module toxin, RelE/StbE family; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system
YP_004295987.1	PFAM: CopG-like DNA-binding; KEGG: nhl:Nhal_0318 CopG domain protein DNA-binding domain protein
YP_004295988.1	KEGG: lpc:LPC_2791 conjugal transfer protein TraM
YP_004295989.1	PFAM: Integrase, catalytic core, phage; KEGG: afr:AFE_0995 site-specific recombinase, phage integrase family
YP_004295990.1	PFAM: Integrase, catalytic core, phage; KEGG: tin:Tint_1145 integrase family protein
YP_004295991.1	KEGG: afm:AFUA_8G02350 PKS-like enzyme
YP_004295992.1	KEGG: eba:ebA798 hypothetical protein
YP_004295993.1	KEGG: vap:Vapar_3801 hypothetical protein
YP_004295994.1	KEGG: ahe:Arch_1299 LPXTG-motif cell wall anchor domain protein
YP_004295995.1	KEGG: ols:Olsu_0575 potassium transporter
YP_004295996.1	PFAM: Protein of unknown function DUF3631; KEGG: rso:RSc2483 hypothetical protein
YP_004295997.1	KEGG: cbr:CBG11014 C. briggsae CBR-SUR-5 protein
YP_004295998.1	KEGG: rxy:Rxyl_1916 hypothetical protein
YP_004295999.1	KEGG: bpb:bpr_I1143 hypothetical protein
YP_004296000.1	KEGG: tnp:Tnap_0277 PhoH family protein
YP_004296002.1	KEGG: vdi:Vdis_0664 hypothetical protein
YP_004296003.1	PFAM: Peptidase A2A, retrovirus RVP subgroup; KEGG: tan:TA11510 DNA-damage inducible protein ddi1-like
YP_004296004.1	KEGG: nmu:Nmul_A2057 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, non-essential domain; RNA polymerase sigma factor 70, region 1.1; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 1.2
YP_004296005.1	KEGG: nmu:Nmul_A2058 DNA primase; TIGRFAM: DNA primase, DnaG; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; DNA primase, DnaB-helicase binding domain; DNA primase DnaG, DnaB-binding
YP_004296006.1	KEGG: neu:NE0227 hypothetical protein
YP_004296007.1	KEGG: nmu:Nmul_A2060 30S ribosomal protein S21; TIGRFAM: Ribosomal protein S21; PFAM: Ribosomal protein S21
YP_004296008.1	KEGG: nmu:Nmul_A2414 hypothetical protein; HAMAP: Ribosome-associated, YjgA; PFAM: Ribosome-associated, YjgA
YP_004296009.1	PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: nmu:Nmul_A2415 peptidase U62, modulator of DNA gyrase
YP_004296011.1	KEGG: mei:Msip34_2442 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial
YP_004296012.1	KEGG: neu:NE0570 lipase
YP_004296013.1	PFAM: Protein of unknown function DUF1840; KEGG: net:Neut_0486 hypothetical protein
YP_004296014.1	KEGG: bth:BT_3853 hypothetical protein
YP_004296015.1	PFAM: PEP-CTERM bacterial; KEGG: meh:M301_2481 protein of unknown function DUF1555
YP_004296016.1	PFAM: Histone deacetylase superfamily; KEGG: slt:Slit_1540 histone deacetylase
YP_004296017.1	KEGG: brm:Bmur_0150 apolipoprotein A1/A4/E
YP_004296019.1	KEGG: swd:Swoo_3607 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein
YP_004296020.1	PFAM: Filamentation induced by cAMP/death on curing-related; KEGG: cts:Ctha_0805 filamentation induced by cAMP protein Fic
YP_004296021.1	KEGG: pag:PLES_44951 hypothetical protein
YP_004296022.1	KEGG: drt:Dret_2530 hypothetical protein
YP_004296023.1	PFAM: Protein of unknown function DUF45; KEGG: nmu:Nmul_A0547 hypothetical protein
YP_004296024.1	KEGG: net:Neut_1866 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_004296025.1	KEGG: neu:NE1185 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; PFAM: Haloacid dehalogenase-like hydrolase
YP_004296026.1	TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit; KEGG: mei:Msip34_2127 glycyl-tRNA synthetase, beta subunit
YP_004296027.1	TIGRFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; KEGG: neu:NE1187 glycyl-tRNA synthetase subunit alpha; PFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit
YP_004296028.1	TIGRFAM: Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; KEGG: nmu:Nmul_A0552 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004296029.1	KEGG: nmu:Nmul_A0586 hypothetical protein
YP_004296030.1	KEGG: neu:NE1831 putative cell division inhibitor MinC; TIGRFAM: Septum formation inhibitor MinC; PFAM: Septum formation inhibitor MinC, C-terminal; Septum formation inhibitor MinC, N-terminal
YP_004296031.1	KEGG: net:Neut_1136 septum site-determining protein MinD; TIGRFAM: Septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase
YP_004296032.1	KEGG: neu:NE1829 cell division topological specificity factor MinE; TIGRFAM: Septum formation topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE
YP_004296033.1	TIGRFAM: Outer membrane lipoprotein LolB; HAMAP: Outer membrane lipoprotein LolB; KEGG: nmu:Nmul_A0587 outer membrane lipoprotein LolB; PFAM: Outer membrane lipoprotein LolB
YP_004296034.1	TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: nmu:Nmul_A0588 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal
YP_004296035.1	TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: neu:NE1826 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase
YP_004296036.1	KEGG: nmu:Nmul_A0590 50S ribosomal protein L25/general stress protein Ctc; TIGRFAM: Ribosomal protein L25, long-form; PFAM: Ribosomal protein L25, short-form
YP_004296037.1	TIGRFAM: Peptidyl-tRNA hydrolase; KEGG: nmu:Nmul_A0591 peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase
YP_004296038.1	KEGG: nmu:Nmul_A0592 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Domain of unknown function DUF933; GTP-binding protein, HSR1-related
YP_004296039.1	PFAM: Filamentation induced by cAMP/death on curing-related; KEGG: shn:Shewana3_2962 filamentation induced by cAMP protein Fic
YP_004296040.1	PFAM: Domain of unknown function DUF262; KEGG: afe:Lferr_0290 hypothetical protein
YP_004296041.1	KEGG: slo:Shew_0457 ATP-dependent helicase HepA; PFAM: RNA polymerase recycling, bacterial, C-terminal; Helicase, C-terminal; SNF2-related; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004296042.1	PFAM: Protein of unknown function DUF2490; KEGG: neu:NE0571 hypothetical protein
YP_004296043.1	KEGG: ppr:PBPRB1378 hypothetical protein
YP_004296045.1	KEGG: nmu:Nmul_A0962 cytochrome c, class I
YP_004296046.1	PFAM: HemN, C-terminal; KEGG: slt:Slit_0423 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB
YP_004296047.1	KEGG: net:Neut_2036 transcriptional regulator, Crp/Fnr family protein; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding domain
YP_004296048.1	KEGG: nmu:Nmul_A0657 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2
YP_004296049.1	KEGG: neu:NE1717 elongation factor Ts; TIGRFAM: Translation elongation factor EFTs/EF1B; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal
YP_004296050.1	KEGG: nmu:Nmul_A0659 uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; PFAM: Aspartate/glutamate/uridylate kinase
YP_004296051.1	KEGG: neu:NE1715 ribosome recycling factor; TIGRFAM: Ribosome recycling factor; PFAM: Ribosome recycling factor
YP_004296052.1	TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; KEGG: nmu:Nmul_A0661 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase-like
YP_004296053.1	PFAM: Phosphatidate cytidylyltransferase; KEGG: nmu:Nmul_A0662 phosphatidate cytidylyltransferase
YP_004296054.1	TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: net:Neut_2029 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal
YP_004296055.1	KEGG: nmu:Nmul_A0664 peptidase M50, putative membrane-associated zinc metallopeptidase; TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase; PFAM: Peptidase M50; PDZ/DHR/GLGF
YP_004296056.1	KEGG: net:Neut_2027 surface antigen (D15); TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Bacterial surface antigen (D15); Surface antigen variable number
YP_004296057.1	KEGG: net:Neut_2026 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH)
YP_004296058.1	KEGG: net:Neut_2025 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ
YP_004296059.1	KEGG: nmu:Nmul_A0668 ribonuclease H; PFAM: Ribonuclease HII/HIII
YP_004296060.1	PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: net:Neut_2023 FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)
YP_004296061.1	TIGRFAM: DNA mismatch repair protein MutS, type 1; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp; KEGG: nmu:Nmul_A0670 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core
YP_004296062.1	PFAM: Cell wall hydrolase, SleB; KEGG: dba:Dbac_1158 cell wall hydrolase SleB
YP_004296063.1	KEGG: ang:An11g07930 hypothetical protein
YP_004296064.1	KEGG: neu:NE1119 hypothetical protein
YP_004296065.1	KEGG: mno:Mnod_1082 hypothetical protein
YP_004296066.1	KEGG: nmu:Nmul_A1518 hypothetical protein
YP_004296067.1	KEGG: afw:Anae109_2950 signal transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core
YP_004296068.1	KEGG: amr:AM1_6172 IS5 family transposase
YP_004296069.1	KEGG: ddi:DDB_G0295771 hypothetical protein
YP_004296070.1	PFAM: Ferric-uptake regulator; KEGG: nmu:Nmul_A2512 ferric uptake regulator family protein
YP_004296071.1	KEGG: nmu:Nmul_A2511 hypothetical protein
YP_004296073.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: nmu:Nmul_A2510 TonB-dependent receptor
YP_004296074.1	KEGG: nhl:Nhal_2121 hypothetical protein
YP_004296075.1	KEGG: net:Neut_1871 hypothetical protein
YP_004296076.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: neu:NE1215 short-chain dehydrogenase/reductase
YP_004296077.1	KEGG: nmu:Nmul_A0103 hypothetical protein
YP_004296078.1	PFAM: Protein of unknown function DUF3460; KEGG: net:Neut_1676 hypothetical protein
YP_004296079.1	PFAM: ADP-ribosylation/Crystallin J1; KEGG: nmu:Nmul_A1026 hypothetical protein
YP_004296080.1	PFAM: Uncharacterised protein family UPF0434/Trm112; KEGG: net:Neut_2110 tetraacyldisaccharide 4'-kinase
YP_004296081.1	TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: nmu:Nmul_A2767 ParB-like partition proteins; SMART: ParB-like nuclease
YP_004296082.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: net:Neut_2435 cobyrinic acid a,c-diamide synthase
YP_004296083.1	KEGG: neu:NE2475 16S rRNA methyltransferase GidB; TIGRFAM: rRNA small subunit methyltransferase G; PFAM: rRNA small subunit methyltransferase G
YP_004296084.1	KEGG: nmu:Nmul_A2770 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: Glucose-inhibited division protein A; PFAM: Glucose-inhibited division protein A-related
YP_004296085.1	PFAM: Integrase, catalytic core; Resolvase, helix-turn-helix domain; KEGG: pst:PSPTO_B0040 ISPsy4, transposase
YP_004296086.1	KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004296087.1	KEGG: gca:Galf_2611 DNA-damage-inducible protein D
YP_004296088.1	PFAM: Protein of unknown function DUF1016; KEGG: gpb:HDN1F_15170 protein of unknown function DUF1016
YP_004296089.1	PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: paa:Paes_2397 restriction modification system DNA specificity domain
YP_004296090.1	PFAM: Filamentation induced by cAMP/death on curing-related; KEGG: fph:Fphi_0614 mobilization/cell filamentation protein-like protein
YP_004296091.1	TIGRFAM: Restriction endonuclease, type I, EcoRI, R subunit; PFAM: Type I restriction and modification enzyme, subunit R, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Transposase IS200-like; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; KEGG: pph:Ppha_0743 type I site-specific deoxyribonuclease, HsdR family; SMART: DEAD-like helicase, N-terminal
YP_004296092.1	KEGG: nmu:Nmul_A0690 RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004296093.1	PFAM: NADPH-dependent FMN reductase; KEGG: rfr:Rfer_2368 NADPH-dependent FMN reductase
YP_004296094.1	KEGG: nmu:Nmul_A0689 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004296095.1	KEGG: nmu:Nmul_A0688 hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004296096.1	PFAM: Protein of unknown function DUF192; KEGG: rfr:Rfer_2763 hypothetical protein
YP_004296097.1	KEGG: slt:Slit_2350 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004296098.1	PFAM: Methyltransferase small; KEGG: gca:Galf_2548 methyltransferase small
YP_004296099.1	KEGG: phe:Phep_0928 MazG nucleotide pyrophosphohydrolase
YP_004296100.1	KEGG: bid:Bind_2756 galactose oxidase; PFAM: Domain of unknown function DUF1929; Glyoxal oxidase, N-terminal
YP_004296101.1	KEGG: ptm:GSPATT00027329001 hypothetical protein
YP_004296102.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: bpd:BURPS668_0139 cytidine/deoxycytidylate deaminase family protein
YP_004296103.1	TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter-like; KEGG: gca:Galf_2613 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004296104.1	PFAM: Protein of unknown function DUF2835; KEGG: ote:Oter_1131 hypothetical protein
YP_004296105.1	TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: bav:BAV1651 ribosomal large subunit pseudouridine synthase F (pseudouridylate synthase); SMART: RNA-binding S4
YP_004296106.1	KEGG: nmu:Nmul_A2287 rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_004296107.1	KEGG: nmu:Nmul_A2286 undecaprenyl pyrophosphate phosphatase; TIGRFAM: Bacitracin resistance protein BacA; PFAM: Bacitracin resistance protein BacA
YP_004296108.1	KEGG: nmu:Nmul_A2285 thiamine biosynthesis protein ThiC; TIGRFAM: Thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC
YP_004296109.1	KEGG: net:Neut_0197 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_004296110.1	KEGG: neu:NE0036 outer membrane efflux protein; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein
YP_004296111.1	PFAM: Mechanosensitive ion channel MscS; KEGG: dac:Daci_2326 MscS mechanosensitive ion channel
YP_004296112.1	TIGRFAM: Poly(A) polymerase, PcnB; KEGG: nmu:Nmul_A0882 poly(A) polymerase; PFAM: Poly A polymerase, head domain
YP_004296113.1	TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: nmu:Nmul_A0881 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK
YP_004296114.1	TIGRFAM: Ketopantoate hydroxymethyltransferase; KEGG: net:Neut_2293 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase
YP_004296115.1	PFAM: Pantoate-beta-alanine ligase; manually curated; TIGRFAM: Pantoate-beta-alanine ligase; Cytidyltransferase-related; KEGG: nmu:Nmul_A0878 pantoate--beta-alanine ligase; HAMAP: Pantoate-beta-alanine ligase
YP_004296116.1	TIGRFAM: Secretion protein HlyD; KEGG: gfo:GFO_1187 HlyD family secretion protein
YP_004296117.1	KEGG: gfo:GFO_1186 AcrB/AcrD/AcrF family heavy metal cation efflux protein; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; Outer membrane efflux protein
YP_004296118.1	KEGG: nmu:Nmul_A2105 hypothetical protein
YP_004296119.1	PFAM: Bile acid:sodium symporter; KEGG: bbe:BBR47_37520 hypothetical protein
YP_004296120.1	KEGG: tcx:Tcr_1014 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein
YP_004296121.1	manually curated; KEGG: svo:SVI_3236 hypothetical protein
YP_004296122.1	KEGG: pol:Bpro_2506 hypothetical protein
YP_004296123.1	KEGG: pol:Bpro_2507 hypothetical protein
YP_004296124.1	KEGG: slt:Slit_2112 hypothetical protein
YP_004296125.1	KEGG: bja:bll4865 putative carbonic anhydrase; PFAM: Carbonic anhydrase; SMART: Carbonic anhydrase
YP_004296126.1	KEGG: rmr:Rmar_2140 transposase-like protein
YP_004296127.1	KEGG: nmu:Nmul_A2108 heavy metal efflux pump CzcA; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein
YP_004296128.1	TIGRFAM: Secretion protein HlyD; KEGG: nmu:Nmul_A2107 secretion protein HlyD
YP_004296129.1	PFAM: Outer membrane efflux protein; KEGG: nmu:Nmul_A2106 outer membrane efflux protein
YP_004296130.1	KEGG: nmu:Nmul_A2105 hypothetical protein
YP_004296131.1	KEGG: neu:NE2376 hypothetical protein
YP_004296132.1	KEGG: noc:Noc_1222 hypothetical protein
YP_004296133.1	PFAM: Redoxin; KEGG: nwa:Nwat_1110 redoxin domain-containing protein
YP_004296134.1	KEGG: nhl:Nhal_2590 arginine decarboxylase
YP_004296135.1	PFAM: Protein of unknown function DUF3570; KEGG: nhl:Nhal_2591 hypothetical protein
YP_004296136.1	KEGG: slt:Slit_0565 flagellar basal-body rod protein FlgB; TIGRFAM: Flagellar basal-body rod protein FlgB; PFAM: Flagellar basal body rod protein, N-terminal
YP_004296137.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: axy:AXYL_06548 transglycosylase SLT domain-containing protein 6
YP_004296138.1	TIGRFAM: Conjugal transfer, TrbL; KEGG: pau:PA14_15540 putative mating pair formation protein TrbL
YP_004296139.1	KEGG: bpf:BpOF4_14260 ABC transporter (substrate-binding protein)
YP_004296140.1	TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: axy:AXYL_06544 P-type conjugative transfer protein TrbJ
YP_004296141.1	PFAM: Type IV secretion system, VirB10 / TraB / TrbI; KEGG: bam:Bamb_6628 conjugal transfer protein TrbI
YP_004296142.1	PFAM: Conjugal transfer, TrbH; KEGG: app:CAP2UW1_4726 conjugal transfer protein TrbH
YP_004296143.1	KEGG: axy:AXYL_06541 P-type conjugative transfer protein TrbG; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer, TrbG/VirB9/CagX
YP_004296144.1	PFAM: VirB8; KEGG: app:CAP2UW1_4728 conjugal transfer protein TrbF
YP_004296145.1	TIGRFAM: CagE, TrbE, VirB component of type IV transporter system; PFAM: CagE, TrbE, VirB component of type IV transporter system, central domain; KEGG: eba:p2B4 conjugal transfer protein TrbE; SMART: ATPase, AAA+ type, core
YP_004296146.1	PFAM: Type IV secretion system, VirB3 / TrbD / AvhB; KEGG: ajs:Ajs_4272 conjugal transfer protein TrbD
YP_004296147.1	PFAM: Conjugal transfer,TrbC; KEGG: bam:Bamb_6634 conjugal transfer protein TrbC
YP_004296148.1	TIGRFAM: ATPase, P-type conjugative transfer, TrbB; PFAM: Type II secretion system protein E; KEGG: llo:LLO_2875 LvhB11; SMART: ATPase, AAA+ type, core
YP_004296149.1	KEGG: app:CAP2UW1_4733 conjugal transfer protein TrbA; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004296150.1	TIGRFAM: ParB-like partition protein; PFAM: Transcriptional repressor protein, KorB; ParB-like nuclease; KEGG: axy:AXYL_06612 transcriptional repressor protein KorB; SMART: ParB-like nuclease
YP_004296151.1	KEGG: eba:p2A235 putative conjugation protein TraO
YP_004296153.1	KEGG: cpy:Cphy_1686 hypothetical protein
YP_004296154.1	KEGG: swd:Swoo_1074 cytochrome c, class I
YP_004296155.1	KEGG: swd:Swoo_1073 cytochrome P460
YP_004296156.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: plm:Plim_1664 LysR substrate-binding protein
YP_004296157.1	KEGG: nmu:Nmul_B2811 hypothetical protein
YP_004296158.1	KEGG: nmu:Nmul_B2810 ParA protein, putative
YP_004296159.1	KEGG: nmu:Nmul_B2812 hypothetical protein
YP_004296160.1	KEGG: llo:LLO_2896 TraM protein
YP_004296161.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: reu:Reut_D6529 conjugal transfer protein TraL
YP_004296162.1	KEGG: xfn:XfasM23_2251 hypothetical protein
YP_004296163.1	KEGG: bcj:BCAL0172 conjugal transfer relaxosome component TraJ
YP_004296164.1	PFAM: Endonuclease relaxase, MobA/VirD2; KEGG: app:CAP2UW1_4640 conjugal transfer relaxase TraI
YP_004296165.1	PFAM: Ti-type conjugative transfer system, TraG-like; KEGG: app:CAP2UW1_4641 conjugal transfer coupling protein TraG
YP_004296166.1	KEGG: bam:Bamb_6613 conjugal transfer peptidase TraF; TIGRFAM: Peptidase S26C, conjugative transfer signal peptidase TraF; PFAM: Peptidase S26, conserved region
YP_004296167.1	KEGG: xfn:XfasM23_2245 conjugal transfer protein
YP_004296168.1	KEGG: app:CAP2UW1_4644 hypothetical protein; PFAM: Domain of unknown function DUF1738; Toprim domain; SMART: Toprim domain
YP_004296169.1	KEGG: vei:Veis_4707 hypothetical protein
YP_004296170.1	KEGG: ana:all1719 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004296171.1	KEGG: mfa:Mfla_0534 hypothetical protein
YP_004296172.1	PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase
YP_004296173.1	KEGG: eba:ebB55 transposase, fragment; manually curated; PFAM: Transposase (putative), IS66 Orf2-like
YP_004296174.1	KEGG: dat:HRM2_44620 hypothetical protein
YP_004296175.1	KEGG: ret:RHE_PF00102 putative DNA helicase protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004296176.1	KEGG: ret:RHE_PF00101 putative aminotransferase protein
YP_004296177.1	KEGG: cpc:Cpar_1878 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein
YP_004296178.1	KEGG: net:Neut_2558 hypothetical protein
YP_004296179.1	PFAM: Domain of unknown function DUF262; KEGG: swd:Swoo_0706 hypothetical protein
YP_004296180.1	PFAM: Domain of unknown function DUF3696, C-terminal; KEGG: vex:VEA_001831 hypothetical protein
YP_004296181.1	KEGG: bfr:BF1768 hypothetical protein
YP_004296182.1	KEGG: gbe:GbCGDNIH1_1519 putative cytoplasmic protein; PFAM: Bacteriophage T5, ORF172 DNA-binding; SMART: Bacteriophage T5, ORF172 DNA-binding
YP_004296183.1	PFAM: Helicase, C-terminal; KEGG: ajs:Ajs_2529 hypothetical protein
YP_004296184.1	KEGG: tin:Tint_1545 putative DNA methylase
YP_004296185.1	PFAM: Protein of unknown function DUF1917; KEGG: mem:Memar_2250 hypothetical protein
YP_004296186.1	PFAM: PemK-like protein; KEGG: neu:NE1181 PemK-like protein
YP_004296187.1	KEGG: neu:NE1182 CopG family protein
YP_004296188.1	KEGG: dat:HRM2_09780 hypothetical protein; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Uncharacterised protein family UPF0156/MetJ /Arc repressor
YP_004296189.1	PFAM: Plasmid stabilisation system; KEGG: dat:HRM2_09770 hypothetical protein
YP_004296190.1	PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: app:CAP2UW1_4555 integrase family protein
YP_004296191.1	KEGG: dia:Dtpsy_2137 arsenical pump membrane protein; TIGRFAM: Arsenical pump membrane protein; PFAM: Arsenical pump membrane protein
YP_004296192.1	KEGG: psa:PST_0240 arsenate reductase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight
YP_004296193.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bte:BTH_II0960 glyoxalase family protein family
YP_004296194.1	KEGG: bcj:BCAM0233 ArsR family regulatory protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_004296195.1	KEGG: har:HEAR1579 hypothetical protein
YP_004296196.1	KEGG: nmu:Nmul_A1630 hypothetical protein
YP_004296197.1	PFAM: Copper binding periplasmic protein CusF; KEGG: rfr:Rfer_0412 secretion protein HlyD
YP_004296198.1	PFAM: Fatty acid hydroxylase; KEGG: gca:Galf_1902 fatty acid hydroxylase
YP_004296199.1	PFAM: Methyltransferase type 11; KEGG: gca:Galf_2172 methyltransferase type 12
YP_004296200.1	KEGG: nmu:Nmul_A0152 proline-rich region