-- dump date 20140619_164436 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_004293219.1 325980816 10296665 74..370 1 NC_015221.1 KEGG: dat:HRM2_09780 hypothetical protein; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Uncharacterised protein family UPF0156/MetJ /Arc repressor; addiction module antidote protein 370 10296665 NAL212_0094 Nitrosomonas sp. AL212 addiction module antidote protein YP_004293219.1 74 D 153948 CDS YP_004293220.1 325980817 10296596 357..704 1 NC_015221.1 PFAM: Plasmid stabilisation system; KEGG: dat:HRM2_09770 hypothetical protein; plasmid stabilization system 704 10296596 NAL212_0095 Nitrosomonas sp. AL212 plasmid stabilization system YP_004293220.1 357 D 153948 CDS YP_004293221.1 325980818 10296597 706..1656 1 NC_015221.1 PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: app:CAP2UW1_4555 integrase family protein; integrase family protein 1656 10296597 NAL212_0096 Nitrosomonas sp. AL212 integrase family protein YP_004293221.1 706 D 153948 CDS YP_004293222.1 325980819 10296598 complement(1867..2301) 1 NC_015221.1 TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: mms:mma_1754 putative transcriptional regulator MerR; SMART: HTH transcriptional regulator, MerR; transcriptional regulator, MerR family 2301 10296598 NAL212_0097 Nitrosomonas sp. AL212 transcriptional regulator, MerR family YP_004293222.1 1867 R 153948 CDS YP_004293223.1 325980820 10296599 2373..2738 1 NC_015221.1 PFAM: Mercuric transport protein MerT; KEGG: sty:HCM1.152 putative mercuric transport protein; mercuric transport protein merT 2738 10296599 NAL212_0098 Nitrosomonas sp. AL212 mercuric transport protein merT YP_004293223.1 2373 D 153948 CDS YP_004293224.1 325980821 10296600 2754..3035 1 NC_015221.1 KEGG: net:Neut_2569 mercuric transport protein periplasmic component; TIGRFAM: Mercuric transport protein periplasmic component; PFAM: Heavy metal transport/detoxification protein; mercuric transport protein periplasmic component 3035 10296600 NAL212_0099 Nitrosomonas sp. AL212 mercuric transport protein periplasmic component YP_004293224.1 2754 D 153948 CDS YP_004293225.1 325980822 10296601 3063..3503 1 NC_015221.1 KEGG: neu:NE0840 putative mercury transport protein MerC; putative mercury transport protein MerC 3503 10296601 NAL212_0100 Nitrosomonas sp. AL212 putative mercury transport protein MerC YP_004293225.1 3063 D 153948 CDS YP_004293226.1 325980823 10296602 3500..5185 1 NC_015221.1 TIGRFAM: Mercury reductase, MerA; KEGG: see:SNSL254_p_0165 putative mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; Heavy metal transport/detoxification protein; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; mercuric reductase 5185 10296602 NAL212_0101 Nitrosomonas sp. AL212 mercuric reductase YP_004293226.1 3500 D 153948 CDS YP_004293227.1 325980824 10296661 complement(5885..6007) 1 NC_015221.1 KEGG: app:CAP2UW1_4618 hypothetical protein; hypothetical protein 6007 10296661 NAL212_0104 Nitrosomonas sp. AL212 hypothetical protein YP_004293227.1 5885 R 153948 CDS YP_004293228.1 325980825 10296604 complement(6120..6578) 1 NC_015221.1 PFAM: Lytic transglycosylase-like, catalytic; KEGG: axy:AXYL_06548 transglycosylase SLT domain-containing protein 6; lytic transglycosylase catalytic subunit 6578 10296604 NAL212_0105 Nitrosomonas sp. AL212 lytic transglycosylase catalytic subunit YP_004293228.1 6120 R 153948 CDS YP_004293229.1 325980826 10296605 complement(6607..7698) 1 NC_015221.1 KEGG: pau:PA14_15540 putative mating pair formation protein TrbL; TIGRFAM: Conjugal transfer, TrbL; PFAM: Conjugal transfer, TrbL/VirB6; P-type conjugative transfer protein TrbL 7698 10296605 NAL212_0106 Nitrosomonas sp. AL212 P-type conjugative transfer protein TrbL YP_004293229.1 6607 R 153948 CDS YP_004293230.1 325980827 10296606 complement(7747..7920) 1 NC_015221.1 KEGG: bce:BC3874 hypothetical protein; hypothetical protein 7920 10296606 NAL212_0107 Nitrosomonas sp. AL212 hypothetical protein YP_004293230.1 7747 R 153948 CDS YP_004293231.1 325980828 10296607 complement(7944..8744) 1 NC_015221.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: axy:AXYL_06544 P-type conjugative transfer protein TrbJ; P-type conjugative transfer protein TrbJ 8744 10296607 NAL212_0108 Nitrosomonas sp. AL212 P-type conjugative transfer protein TrbJ YP_004293231.1 7944 R 153948 CDS YP_004293232.1 325980829 10296608 complement(8762..10153) 1 NC_015221.1 PFAM: Type IV secretion system, VirB10 / TraB / TrbI; KEGG: bam:Bamb_6628 conjugal transfer protein TrbI; conjugation TrbI family protein 10153 10296608 NAL212_0109 Nitrosomonas sp. AL212 conjugation TrbI family protein YP_004293232.1 8762 R 153948 CDS YP_004293233.1 325980830 10296609 complement(10166..10669) 1 NC_015221.1 PFAM: Conjugal transfer, TrbH; KEGG: app:CAP2UW1_4726 conjugal transfer protein TrbH; conjugal transfer TrbH family protein 10669 10296609 NAL212_0110 Nitrosomonas sp. AL212 conjugal transfer TrbH family protein YP_004293233.1 10166 R 153948 CDS YP_004293234.1 325980831 10296610 complement(10672..11598) 1 NC_015221.1 KEGG: eba:p2B6 conjugal transfer protein TrbG; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer, TrbG/VirB9/CagX; P-type conjugative transfer protein TrbG 11598 10296610 NAL212_0111 Nitrosomonas sp. AL212 P-type conjugative transfer protein TrbG YP_004293234.1 10672 R 153948 CDS YP_004293235.1 325980832 10296611 complement(11613..12389) 1 NC_015221.1 PFAM: VirB8; KEGG: app:CAP2UW1_4728 conjugal transfer protein TrbF; VirB8 family protein 12389 10296611 NAL212_0112 Nitrosomonas sp. AL212 VirB8 family protein YP_004293235.1 11613 R 153948 CDS YP_004293236.1 325980833 10296612 complement(12389..14923) 1 NC_015221.1 TIGRFAM: CagE, TrbE, VirB component of type IV transporter system; PFAM: CagE, TrbE, VirB component of type IV transporter system, central domain; KEGG: app:CAP2UW1_4729 conjugal transfer protein TrbE; SMART: ATPase, AAA+ type, core; type IV secretion/conjugal transfer ATPase, VirB4 family 14923 10296612 NAL212_0113 Nitrosomonas sp. AL212 type IV secretion/conjugal transfer ATPase, VirB4 family YP_004293236.1 12389 R 153948 CDS YP_004293237.1 325980834 10296613 complement(14920..15231) 1 NC_015221.1 KEGG: ajs:Ajs_4272 conjugal transfer protein TrbD; conjugal transfer protein TrbD 15231 10296613 NAL212_0114 Nitrosomonas sp. AL212 conjugal transfer protein TrbD YP_004293237.1 14920 R 153948 CDS YP_004293238.1 325980835 10296614 complement(15250..15663) 1 NC_015221.1 PFAM: Conjugal transfer,TrbC; KEGG: eba:p2B3 conjugal transfer protein TrbC; conjugal transfer protein Trbc 15663 10296614 NAL212_0115 Nitrosomonas sp. AL212 conjugal transfer protein Trbc YP_004293238.1 15250 R 153948 CDS YP_004293239.1 325980836 10296662 16203..17183 1 NC_015221.1 PFAM: Transposase, IS4-like; KEGG: atu:Atu4436 IS5 family transposase; transposase IS4 family protein 17183 10296662 NAL212_0117 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004293239.1 16203 D 153948 CDS YP_004293240.1 325980837 10296616 complement(17930..18292) 1 NC_015221.1 KEGG: app:CAP2UW1_4733 conjugal transfer protein TrbA; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 18292 10296616 NAL212_0118 Nitrosomonas sp. AL212 helix-turn-helix domain-containing protein YP_004293240.1 17930 R 153948 CDS YP_004293241.1 325980838 10296617 complement(18316..18471) 1 NC_015221.1 hypothetical protein 18471 10296617 NAL212_0119 Nitrosomonas sp. AL212 hypothetical protein YP_004293241.1 18316 R 153948 CDS YP_004293242.1 325980839 10296618 18720..19784 1 NC_015221.1 TIGRFAM: ParB-like partition protein; PFAM: Transcriptional repressor protein, KorB; ParB-like nuclease; KEGG: axy:AXYL_06612 transcriptional repressor protein KorB; SMART: ParB-like nuclease; parB-like partition protein 19784 10296618 NAL212_0120 Nitrosomonas sp. AL212 parB-like partition protein YP_004293242.1 18720 D 153948 CDS YP_004293243.1 325980840 10296619 19781..20146 1 NC_015221.1 KEGG: eba:p2A235 putative conjugation protein TraO; putative conjugation protein TraO 20146 10296619 NAL212_0121 Nitrosomonas sp. AL212 putative conjugation protein TraO YP_004293243.1 19781 D 153948 CDS YP_004293244.1 325980841 10296620 complement(20735..21133) 1 NC_015221.1 PFAM: PilT protein, N-terminal; KEGG: rmr:Rmar_0550 PilT protein domain protein; PilT protein domain-containing protein 21133 10296620 NAL212_0122 Nitrosomonas sp. AL212 PilT protein domain-containing protein YP_004293244.1 20735 R 153948 CDS YP_004293245.1 325980842 10296621 complement(21130..21324) 1 NC_015221.1 PFAM: Protein of unknown function DUF2191; KEGG: gpb:HDN1F_25630 hypothetical protein; hypothetical protein 21324 10296621 NAL212_0123 Nitrosomonas sp. AL212 hypothetical protein YP_004293245.1 21130 R 153948 CDS YP_004293246.1 325980843 10296622 21795..22427 1 NC_015221.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mea:Mex_p20006 hypothetical protein; cobyrinic acid ac-diamide synthase 22427 10296622 NAL212_0124 Nitrosomonas sp. AL212 cobyrinic acid ac-diamide synthase YP_004293246.1 21795 D 153948 CDS YP_004293247.1 325980844 10296623 22447..22767 1 NC_015221.1 KEGG: mch:Mchl_3698 hypothetical protein; hypothetical protein 22767 10296623 NAL212_0125 Nitrosomonas sp. AL212 hypothetical protein YP_004293247.1 22447 D 153948 CDS YP_004293248.1 325980845 10296663 complement(23545..23769) 1 NC_015221.1 TIGRFAM: Transcription regulator AbrB; PFAM: Transcription regulator AbrB/SpoV, predicted; KEGG: gur:Gura_3174 AbrB family transcriptional regulator; SMART: Transcription regulator AbrB/SpoV, predicted; transcriptional regulator, AbrB family 23769 10296663 NAL212_0127 Nitrosomonas sp. AL212 transcriptional regulator, AbrB family YP_004293248.1 23545 R 153948 CDS YP_004293249.1 325980846 10296625 24098..25282 1 NC_015221.1 SMART: ATPase, AAA+ type, core; KEGG: phe:Phep_1072 AAA ATPase; AAA ATPase 25282 10296625 NAL212_0128 Nitrosomonas sp. AL212 AAA ATPase YP_004293249.1 24098 D 153948 CDS YP_004293250.1 325980847 10296626 25487..25717 1 NC_015221.1 PFAM: Protein of unknown function DUF433; KEGG: hde:HDEF_1049 hypothetical protein; hypothetical protein 25717 10296626 NAL212_0129 Nitrosomonas sp. AL212 hypothetical protein YP_004293250.1 25487 D 153948 CDS YP_004293251.1 325980848 10296664 complement(26848..27960) 1 NC_015221.1 KEGG: nmu:Nmul_B2812 hypothetical protein; hypothetical protein 27960 10296664 NAL212_0131 Nitrosomonas sp. AL212 hypothetical protein YP_004293251.1 26848 R 153948 CDS YP_004293252.1 325980849 10296628 complement(28003..28446) 1 NC_015221.1 KEGG: llo:LLO_2896 TraM protein; TraM protein 28446 10296628 NAL212_0132 Nitrosomonas sp. AL212 TraM protein YP_004293252.1 28003 R 153948 CDS YP_004293253.1 325980850 10296629 complement(28443..29174) 1 NC_015221.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: reu:Reut_D6529 conjugal transfer protein TraL; cobyrinic acid ac-diamide synthase 29174 10296629 NAL212_0133 Nitrosomonas sp. AL212 cobyrinic acid ac-diamide synthase YP_004293253.1 28443 R 153948 CDS YP_004293254.1 325980851 10296630 complement(29174..29515) 1 NC_015221.1 KEGG: xfn:XfasM23_2251 hypothetical protein; hypothetical protein 29515 10296630 NAL212_0134 Nitrosomonas sp. AL212 hypothetical protein YP_004293254.1 29174 R 153948 CDS YP_004293255.1 325980852 10296631 29885..30238 1 NC_015221.1 KEGG: bcj:BCAL0172 conjugal transfer relaxosome component TraJ; conjugal transfer relaxosome component TraJ 30238 10296631 NAL212_0135 Nitrosomonas sp. AL212 conjugal transfer relaxosome component TraJ YP_004293255.1 29885 D 153948 CDS YP_004293256.1 325980853 10296632 30254..31888 1 NC_015221.1 PFAM: Endonuclease relaxase, MobA/VirD2; KEGG: app:CAP2UW1_4640 conjugal transfer relaxase TraI; relaxase/mobilization nuclease family protein 31888 10296632 NAL212_0136 Nitrosomonas sp. AL212 relaxase/mobilization nuclease family protein YP_004293256.1 30254 D 153948 CDS YP_004293257.1 325980854 10296633 31888..33732 1 NC_015221.1 PFAM: Ti-type conjugative transfer system, TraG-like; KEGG: app:CAP2UW1_4641 conjugal transfer coupling protein TraG; TRAG family protein 33732 10296633 NAL212_0137 Nitrosomonas sp. AL212 TRAG family protein YP_004293257.1 31888 D 153948 CDS YP_004293258.1 325980855 10296634 33762..34301 1 NC_015221.1 KEGG: bam:Bamb_6613 conjugal transfer peptidase TraF; TIGRFAM: Peptidase S26C, conjugative transfer signal peptidase TraF; PFAM: Peptidase S26, conserved region; conjugative transfer signal peptidase TraF 34301 10296634 NAL212_0138 Nitrosomonas sp. AL212 conjugative transfer signal peptidase TraF YP_004293258.1 33762 D 153948 CDS YP_004293259.1 325980856 10296635 34320..34538 1 NC_015221.1 KEGG: eba:p2B16 conjugal transfer protein, TraD; conjugal transfer protein, TraD 34538 10296635 NAL212_0139 Nitrosomonas sp. AL212 conjugal transfer protein, TraD YP_004293259.1 34320 D 153948 CDS YP_004293260.1 325980857 10296636 34525..37416 1 NC_015221.1 KEGG: app:CAP2UW1_4644 hypothetical protein; PFAM: Domain of unknown function DUF1738; Toprim domain; SMART: Toprim domain; hypothetical protein 37416 10296636 NAL212_0140 Nitrosomonas sp. AL212 hypothetical protein YP_004293260.1 34525 D 153948 CDS YP_004293261.1 325980858 10296637 37436..38557 1 NC_015221.1 PFAM: Uncharacterised protein family UPF0758; KEGG: cpi:Cpin_1532 DNA repair protein RadC; DNA repair protein RadC 38557 10296637 NAL212_0141 Nitrosomonas sp. AL212 DNA repair protein RadC YP_004293261.1 37436 D 153948 CDS YP_004293262.1 325980859 10296638 38675..39772 1 NC_015221.1 PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_3025 transposase IS4 family protein; transposase IS4 family protein 39772 10296638 NAL212_0142 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004293262.1 38675 D 153948 CDS YP_004293263.1 325980860 10296639 40343..40861 1 NC_015221.1 KEGG: nmu:Nmul_A1680 cytochrome c family protein; cytochrome c family protein 40861 10296639 NAL212_0143 Nitrosomonas sp. AL212 cytochrome c family protein YP_004293263.1 40343 D 153948 CDS YP_004293264.1 325980861 10296640 41022..41381 1 NC_015221.1 KEGG: saq:Sare_4146 dipeptidyl-peptidase IV; hypothetical protein 41381 10296640 NAL212_0144 Nitrosomonas sp. AL212 hypothetical protein YP_004293264.1 41022 D 153948 CDS YP_004293265.1 325980862 10296641 complement(41654..41905) 1 NC_015221.1 SMART: Regulatory protein, FmdB, putative; manually curated; KEGG: nhl:Nhal_2319 regulatory protein, FmdB family; TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative; regulatory protein, FmdB family 41905 10296641 NAL212_0145 Nitrosomonas sp. AL212 regulatory protein, FmdB family YP_004293265.1 41654 R 153948 CDS YP_004293266.1 325980863 10296642 complement(42003..42656) 1 NC_015221.1 KEGG: mmi:MMAR_1420 carbonic anhydrase, CynT; PFAM: Carbonic anhydrase; SMART: Carbonic anhydrase; carbonic anhydrase 42656 10296642 NAL212_0146 Nitrosomonas sp. AL212 carbonic anhydrase YP_004293266.1 42003 R 153948 CDS YP_004293267.1 325980864 10296643 42924..44486 1 NC_015221.1 KEGG: nhl:Nhal_3060 sigma-54 factor interaction domain-containing protein; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; sigma54 specific transcriptional regulator, Fis family 44486 10296643 NAL212_0147 Nitrosomonas sp. AL212 sigma54 specific transcriptional regulator, Fis family YP_004293267.1 42924 D 153948 CDS YP_004293268.1 325980865 10296644 complement(44764..45120) 1 NC_015221.1 KEGG: nmu:Nmul_A1630 hypothetical protein; hypothetical protein 45120 10296644 NAL212_0148 Nitrosomonas sp. AL212 hypothetical protein YP_004293268.1 44764 R 153948 CDS YP_004293269.1 325980866 10296645 complement(45262..47469) 1 NC_015221.1 TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; ATPase, P-type, heavy metal translocating; KEGG: nmu:Nmul_A2005 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; copper-translocating P-type ATPase 47469 10296645 NAL212_0149 Nitrosomonas sp. AL212 copper-translocating P-type ATPase YP_004293269.1 45262 R 153948 CDS YP_004293270.1 325980867 10296646 complement(47536..47889) 1 NC_015221.1 KEGG: nmu:Nmul_A1630 hypothetical protein; hypothetical protein 47889 10296646 NAL212_0150 Nitrosomonas sp. AL212 hypothetical protein YP_004293270.1 47536 R 153948 CDS YP_004293271.1 325980868 10296647 complement(48404..49303) 1 NC_015221.1 PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit; integrase catalytic region 49303 10296647 NAL212_0152 Nitrosomonas sp. AL212 integrase catalytic region YP_004293271.1 48404 R 153948 CDS YP_004293272.1 325980869 10296648 complement(49303..49623) 1 NC_015221.1 PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 49623 10296648 NAL212_0153 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004293272.1 49303 R 153948 CDS YP_004293273.1 325980870 10296649 complement(50200..52902) 1 NC_015221.1 SMART: ATPase, P-type cation-transporter, N-terminal; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: lpp:lpp2364 hypothetical protein; PFAM: ATPase, P-type, ATPase-associated domain; ATPase, P-type cation-transporter, C-terminal; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type (transporting), HAD superfamily, subfamily IC 52902 10296649 NAL212_0154 Nitrosomonas sp. AL212 ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_004293273.1 50200 R 153948 CDS YP_004293274.1 325980871 10296650 complement(52899..53558) 1 NC_015221.1 PFAM: Methyltransferase type 11; KEGG: aoe:Clos_1084 methyltransferase type 11; methyltransferase type 11 53558 10296650 NAL212_0155 Nitrosomonas sp. AL212 methyltransferase type 11 YP_004293274.1 52899 R 153948 CDS YP_004293275.1 325980872 10296651 complement(53555..56704) 1 NC_015221.1 KEGG: nmu:Nmul_A1406 heavy metal efflux pump CzcA; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; heavy metal efflux pump, CzcA family 56704 10296651 NAL212_0156 Nitrosomonas sp. AL212 heavy metal efflux pump, CzcA family YP_004293275.1 53555 R 153948 CDS YP_004293276.1 325980873 10296652 complement(56706..58298) 1 NC_015221.1 KEGG: nmu:Nmul_A1407 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Copper binding periplasmic protein CusF; RND family efflux transporter MFP subunit 58298 10296652 NAL212_0157 Nitrosomonas sp. AL212 RND family efflux transporter MFP subunit YP_004293276.1 56706 R 153948 CDS YP_004293277.1 325980874 10296653 complement(58323..59687) 1 NC_015221.1 PFAM: Outer membrane efflux protein; KEGG: nmu:Nmul_A1408 outer membrane efflux protein; outer membrane efflux protein 59687 10296653 NAL212_0158 Nitrosomonas sp. AL212 outer membrane efflux protein YP_004293277.1 58323 R 153948 CDS YP_004293278.1 325980875 10296654 complement(59684..60106) 1 NC_015221.1 PFAM: Copper binding periplasmic protein CusF; KEGG: tbd:Tbd_1326 hypothetical protein; copper binding periplasmic protein cusF 60106 10296654 NAL212_0159 Nitrosomonas sp. AL212 copper binding periplasmic protein cusF YP_004293278.1 59684 R 153948 CDS YP_004293279.1 325980876 10296655 complement(60262..60603) 1 NC_015221.1 KEGG: ppp:PHYPADRAFT_178680 hypothetical protein; hypothetical protein 60603 10296655 NAL212_0160 Nitrosomonas sp. AL212 hypothetical protein YP_004293279.1 60262 R 153948 CDS YP_004293280.1 325980877 10296656 complement(60709..61065) 1 NC_015221.1 KEGG: nmu:Nmul_A1630 hypothetical protein; hypothetical protein 61065 10296656 NAL212_0161 Nitrosomonas sp. AL212 hypothetical protein YP_004293280.1 60709 R 153948 CDS YP_004293281.1 325980878 10296657 complement(61435..62787) 1 NC_015221.1 KEGG: rso:RSp0584 ISRSO9-transposase protein; ISRSO9-transposase protein 62787 10296657 NAL212_0162 Nitrosomonas sp. AL212 ISRSO9-transposase protein YP_004293281.1 61435 R 153948 CDS YP_004293282.1 325980879 10296658 complement(63056..63397) 1 NC_015221.1 PFAM: PemK-like protein; KEGG: neu:NE1181 PemK-like protein; transcriptional modulator of MazE/toxin, MazF 63397 10296658 NAL212_0163 Nitrosomonas sp. AL212 transcriptional modulator of MazE/toxin, MazF YP_004293282.1 63056 R 153948 CDS YP_004293283.1 325980880 10296659 complement(63390..63620) 1 NC_015221.1 KEGG: neu:NE1182 CopG family protein; CopG family protein 63620 10296659 NAL212_0164 Nitrosomonas sp. AL212 CopG family protein YP_004293283.1 63390 R 153948 CDS YP_004293284.1 325980882 10299742 17..1441 1 NC_015222.1 TIGRFAM: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; KEGG: net:Neut_0001 chromosomal replication initiation protein; SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; chromosomal replication initiator protein DnaA 1441 10299742 NAL212_0165 Nitrosomonas sp. AL212 chromosomal replication initiator protein DnaA YP_004293284.1 17 D 153948 CDS YP_004293285.1 325980883 10296667 1631..2746 1 NC_015222.1 SMART: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; KEGG: nmu:Nmul_A0002 DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain, central; DNA polymerase III, beta chain, C-terminal; DNA polymerase III, beta chain, N-terminal; DNA polymerase III subunit beta 2746 10296667 NAL212_0166 Nitrosomonas sp. AL212 DNA polymerase III subunit beta YP_004293285.1 1631 D 153948 CDS YP_004293286.1 325980884 10296668 2826..5246 1 NC_015222.1 SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain; TIGRFAM: DNA gyrase, subunit B; KEGG: nmu:Nmul_A0003 DNA gyrase subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; DNA topoisomerase, type IIA, subunit B, C-terminal; DNA gyrase subunit B 5246 10296668 NAL212_0167 Nitrosomonas sp. AL212 DNA gyrase subunit B YP_004293286.1 2826 D 153948 CDS YP_004293287.1 325980885 10296669 5304..6278 1 NC_015222.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: lba:Lebu_1528 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 6278 10296669 NAL212_0168 Nitrosomonas sp. AL212 endonuclease/exonuclease/phosphatase YP_004293287.1 5304 D 153948 CDS YP_004293288.1 325980886 10296670 complement(6344..8158) 1 NC_015222.1 KEGG: nmu:Nmul_A1770 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; GTP-binding protein TypA 8158 10296670 NAL212_0169 Nitrosomonas sp. AL212 GTP-binding protein TypA YP_004293288.1 6344 R 153948 CDS YP_004293289.1 325980887 10296671 8279..9238 1 NC_015222.1 PFAM: Ornithine cyclodeaminase/mu-crystallin; KEGG: mlo:mlr2282 ornithine cyclodeaminase; ornithine cyclodeaminase/mu-crystallin 9238 10296671 NAL212_0170 Nitrosomonas sp. AL212 ornithine cyclodeaminase/mu-crystallin YP_004293289.1 8279 D 153948 CDS YP_004293290.1 325980888 10296672 complement(9244..9441) 1 NC_015222.1 KEGG: neu:NE2387 hypothetical protein; hypothetical protein 9441 10296672 NAL212_0171 Nitrosomonas sp. AL212 hypothetical protein YP_004293290.1 9244 R 153948 CDS YP_004293291.1 325980889 10296673 9587..9910 1 NC_015222.1 PFAM: Divalent ion tolerance protein, CutA1; KEGG: net:Neut_0847 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein 9910 10296673 NAL212_0172 Nitrosomonas sp. AL212 CutA1 divalent ion tolerance protein YP_004293291.1 9587 D 153948 CDS YP_004293292.1 325980890 10296674 9923..11860 1 NC_015222.1 KEGG: net:Neut_0846 protein-disulfide reductase; PFAM: Cytochrome c assembly protein, transmembrane domain; Thioredoxin domain; protein-disulfide reductase 11860 10296674 NAL212_0173 Nitrosomonas sp. AL212 protein-disulfide reductase YP_004293292.1 9923 D 153948 CDS YP_004293293.1 325980891 10296675 11925..12512 1 NC_015222.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: nmu:Nmul_A2682 thioredoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 12512 10296675 NAL212_0174 Nitrosomonas sp. AL212 alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen YP_004293293.1 11925 D 153948 CDS YP_004293294.1 325980892 10296676 12844..13182 1 NC_015222.1 PFAM: Transport-associated; KEGG: net:Neut_0492 transport-associated; transport-associated protein 13182 10296676 NAL212_0175 Nitrosomonas sp. AL212 transport-associated protein YP_004293294.1 12844 D 153948 CDS YP_004293295.1 325980893 10296677 13437..13811 1 NC_015222.1 PFAM: Protein of unknown function DUF2784; KEGG: net:Neut_1861 hypothetical protein; hypothetical protein 13811 10296677 NAL212_0176 Nitrosomonas sp. AL212 hypothetical protein YP_004293295.1 13437 D 153948 CDS YP_004293296.1 325980894 10296678 complement(13808..14716) 1 NC_015222.1 PFAM: tRNA(Ile)-lysidine/2-thiocytidine synthase; KEGG: nmu:Nmul_A0509 C32 tRNA thiolase; PP-loop domain-containing protein 14716 10296678 NAL212_0177 Nitrosomonas sp. AL212 PP-loop domain-containing protein YP_004293296.1 13808 R 153948 CDS YP_004293297.1 325980895 10296679 14877..15329 1 NC_015222.1 PFAM: Blue (type 1) copper domain; KEGG: neu:NE1491 putative copper-containing oxidoreductase signal peptide protein; blue (type 1) copper domain-containing protein 15329 10296679 NAL212_0178 Nitrosomonas sp. AL212 blue (type 1) copper domain-containing protein YP_004293297.1 14877 D 153948 CDS YP_004293298.1 325980896 10296680 15326..15865 1 NC_015222.1 PFAM: Protein of unknown function DUF411; KEGG: net:Neut_0755 hypothetical protein; hypothetical protein 15865 10296680 NAL212_0179 Nitrosomonas sp. AL212 hypothetical protein YP_004293298.1 15326 D 153948 CDS YP_004293299.1 325980897 10296681 15879..16346 1 NC_015222.1 PFAM: Cytochrome c, class I; KEGG: nmu:Nmul_A0573 cytochrome c, class I; cytochrome c class I 16346 10296681 NAL212_0180 Nitrosomonas sp. AL212 cytochrome c class I YP_004293299.1 15879 D 153948 CDS YP_004293300.1 325980898 10296682 complement(16370..16774) 1 NC_015222.1 KEGG: neu:NE2318 hypothetical protein; hypothetical protein 16774 10296682 NAL212_0181 Nitrosomonas sp. AL212 hypothetical protein YP_004293300.1 16370 R 153948 CDS YP_004293301.1 325980899 10296683 complement(17224..17931) 1 NC_015222.1 KEGG: nmu:Nmul_A0435 phosphate uptake regulator, PhoU; TIGRFAM: PhoU; PFAM: PhoU; phosphate uptake regulator PhoU 17931 10296683 NAL212_0182 Nitrosomonas sp. AL212 phosphate uptake regulator PhoU YP_004293301.1 17224 R 153948 CDS YP_004293302.1 325980900 10296684 complement(17990..18649) 1 NC_015222.1 TIGRFAM: Ribose 5-phosphate isomerase, type A; KEGG: net:Neut_1829 ribose-5-phosphate isomerase A; PFAM: Ribose 5-phosphate isomerase, type A; ribose 5-phosphate isomerase 18649 10296684 NAL212_0183 Nitrosomonas sp. AL212 ribose 5-phosphate isomerase YP_004293302.1 17990 R 153948 CDS YP_004293303.1 325980901 10296685 complement(18969..20033) 1 NC_015222.1 TIGRFAM: Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Ketose-bisphosphate aldolase, class-II; KEGG: nmu:Nmul_A0384 fructose-1,6-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II; fructose-bisphosphate aldolase 20033 10296685 NAL212_0184 Nitrosomonas sp. AL212 fructose-bisphosphate aldolase YP_004293303.1 18969 R 153948 CDS YP_004293304.1 325980902 10296686 complement(20172..21623) 1 NC_015222.1 TIGRFAM: Pyruvate kinase; KEGG: nmu:Nmul_A0385 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like; pyruvate kinase 21623 10296686 NAL212_0185 Nitrosomonas sp. AL212 pyruvate kinase YP_004293304.1 20172 R 153948 CDS YP_004293305.1 325980903 10296687 complement(21638..22816) 1 NC_015222.1 HAMAP: Phosphoglycerate kinase; KEGG: neu:NE0326 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; phosphoglycerate kinase 22816 10296687 NAL212_0186 Nitrosomonas sp. AL212 phosphoglycerate kinase YP_004293305.1 21638 R 153948 CDS YP_004293306.1 325980904 10296688 complement(22950..23948) 1 NC_015222.1 SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: nmu:Nmul_A0387 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; glyceraldehyde-3-phosphate dehydrogenase 23948 10296688 NAL212_0187 Nitrosomonas sp. AL212 glyceraldehyde-3-phosphate dehydrogenase YP_004293306.1 22950 R 153948 CDS YP_004293307.1 325980905 10296689 complement(24029..26047) 1 NC_015222.1 SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Transketolase, bacterial-like; KEGG: nmu:Nmul_A0388 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; transketolase 26047 10296689 NAL212_0188 Nitrosomonas sp. AL212 transketolase YP_004293307.1 24029 R 153948 CDS YP_004293308.1 325980906 10296690 26346..27689 1 NC_015222.1 PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; KEGG: neu:NE1616 glutamate dehydrogenase; SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; glutamate dehydrogenase 27689 10296690 NAL212_0189 Nitrosomonas sp. AL212 glutamate dehydrogenase YP_004293308.1 26346 D 153948 CDS YP_004293309.1 325980907 10296691 27739..29763 1 NC_015222.1 PFAM: Lytic transglycosylase-like, catalytic; KEGG: net:Neut_0502 lytic transglycosylase, catalytic; Lytic transglycosylase catalytic 29763 10296691 NAL212_0190 Nitrosomonas sp. AL212 Lytic transglycosylase catalytic YP_004293309.1 27739 D 153948 CDS YP_004293310.1 325980908 10296692 29782..31008 1 NC_015222.1 KEGG: nmu:Nmul_A2451 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase; HAMAP: tRNA nucleotidyltransferase, proteobacteria; PFAM: Poly A polymerase, head domain; Metal-dependent phosphohydrolase, HD subdomain; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 31008 10296692 NAL212_0191 Nitrosomonas sp. AL212 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_004293310.1 29782 D 153948 CDS YP_004293311.1 325980909 10296693 31117..32202 1 NC_015222.1 KEGG: mag:amb3422 hypothetical protein; hypothetical protein 32202 10296693 NAL212_0192 Nitrosomonas sp. AL212 hypothetical protein YP_004293311.1 31117 D 153948 CDS YP_004293312.1 325980910 10296694 complement(32284..33108) 1 NC_015222.1 KEGG: dat:HRM2_17520 hypothetical protein; hypothetical protein 33108 10296694 NAL212_0193 Nitrosomonas sp. AL212 hypothetical protein YP_004293312.1 32284 R 153948 CDS YP_004293313.1 325980911 10296695 33219..33689 1 NC_015222.1 PFAM: Ion transport 2; KEGG: nmu:Nmul_A1691 K+ channel, pore region; Ion transport 2 domain-containing protein 33689 10296695 NAL212_0194 Nitrosomonas sp. AL212 Ion transport 2 domain-containing protein YP_004293313.1 33219 D 153948 CDS YP_004293314.1 325980912 10296696 33965..34609 1 NC_015222.1 KEGG: neu:NE0372 hypothetical protein; hypothetical protein 34609 10296696 NAL212_0195 Nitrosomonas sp. AL212 hypothetical protein YP_004293314.1 33965 D 153948 CDS YP_004293315.1 325980913 10296697 34834..35259 1 NC_015222.1 PFAM: Heat shock protein Hsp20; KEGG: nmu:Nmul_A1762 heat shock protein HSP20; heat shock protein Hsp20 35259 10296697 NAL212_0196 Nitrosomonas sp. AL212 heat shock protein Hsp20 YP_004293315.1 34834 D 153948 CDS YP_004293316.1 325980914 10296698 35418..37349 1 NC_015222.1 KEGG: nmu:Nmul_A2700 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 37349 10296698 NAL212_0197 Nitrosomonas sp. AL212 ABC transporter YP_004293316.1 35418 D 153948 CDS YP_004293317.1 325980915 10296699 37451..37777 1 NC_015222.1 PFAM: Cytochrome c, class I; KEGG: net:Neut_1652 cytochrome c, class IC:cytochrome c, class I; cytochrome c class I 37777 10296699 NAL212_0198 Nitrosomonas sp. AL212 cytochrome c class I YP_004293317.1 37451 D 153948 CDS YP_004293318.1 325980916 10296700 37805..38134 1 NC_015222.1 PFAM: Cytochrome c, class I; KEGG: net:Neut_1651 cytochrome c, class I; cytochrome c class I 38134 10296700 NAL212_0199 Nitrosomonas sp. AL212 cytochrome c class I YP_004293318.1 37805 D 153948 CDS YP_004293319.1 325980917 10296701 complement(38217..38645) 1 NC_015222.1 PFAM: Protein of unknown function DUF1841; KEGG: neu:NE0737 hypothetical protein; hypothetical protein 38645 10296701 NAL212_0200 Nitrosomonas sp. AL212 hypothetical protein YP_004293319.1 38217 R 153948 CDS YP_004293320.1 325980918 10296702 complement(38659..39291) 1 NC_015222.1 SMART: HhH-GPD domain; Helix-hairpin-helix DNA-binding motif, class 1; Endonuclease III-like, iron-sulphur cluster loop motif; TIGRFAM: Endonuclease III/Nth; KEGG: net:Neut_0644 endonuclease III; PFAM: HhH-GPD domain; Helix-hairpin-helix motif; endonuclease III 39291 10296702 NAL212_0201 Nitrosomonas sp. AL212 endonuclease III YP_004293320.1 38659 R 153948 CDS YP_004293321.1 325980919 10296703 complement(39288..39971) 1 NC_015222.1 KEGG: mms:mma_0717 electron transport complex protein RnfB; TIGRFAM: Electron transport complex, RnfB; PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; RnfABCDGE type electron transport complex subunit B 39971 10296703 NAL212_0202 Nitrosomonas sp. AL212 RnfABCDGE type electron transport complex subunit B YP_004293321.1 39288 R 153948 CDS YP_004293322.1 325980920 10296704 complement(39984..41006) 1 NC_015222.1 TIGRFAM: Dihydroorotate dehydrogenase, class 2; KEGG: nmu:Nmul_A2706 dihydroorotate dehydrogenase 2; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; dihydroorotate dehydrogenase 41006 10296704 NAL212_0203 Nitrosomonas sp. AL212 dihydroorotate dehydrogenase YP_004293322.1 39984 R 153948 CDS YP_004293323.1 325980921 10296705 complement(41048..41755) 1 NC_015222.1 KEGG: nmu:Nmul_A2708 arginyl-tRNA-protein transferase; HAMAP: Arginine-tRNA-protein transferase, predicted, prokaryotic; PFAM: Arginine-tRNA-protein transferase, C-terminal; Arginine-tRNA-protein transferase, N-terminal; arginyl-tRNA--protein transferase 41755 10296705 NAL212_0204 Nitrosomonas sp. AL212 arginyl-tRNA--protein transferase YP_004293323.1 41048 R 153948 CDS YP_004293324.1 325980922 10296706 complement(41765..42466) 1 NC_015222.1 TIGRFAM: Leucyl/phenylalanyl-tRNA-protein transferase; KEGG: nmu:Nmul_A2709 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: Leucyl/phenylalanyl-tRNA-protein transferase; leucyl/phenylalanyl-tRNA/protein transferase 42466 10296706 NAL212_0205 Nitrosomonas sp. AL212 leucyl/phenylalanyl-tRNA/protein transferase YP_004293324.1 41765 R 153948 CDS YP_004293325.1 325980923 10296707 42599..43516 1 NC_015222.1 KEGG: neu:NE2218 hypothetical protein; hypothetical protein 43516 10296707 NAL212_0206 Nitrosomonas sp. AL212 hypothetical protein YP_004293325.1 42599 D 153948 CDS YP_004293326.1 325980924 10296708 complement(43744..45567) 1 NC_015222.1 TIGRFAM: Allophanate hydrolase; KEGG: nmu:Nmul_A0944 allophanate hydrolase; PFAM: Amidase; allophanate hydrolase 45567 10296708 NAL212_0207 Nitrosomonas sp. AL212 allophanate hydrolase YP_004293326.1 43744 R 153948 CDS YP_004293327.1 325980925 10296709 complement(45564..49187) 1 NC_015222.1 SMART: Allophanate hydrolase subunit 2; Biotin carboxylase, C-terminal; Allophanate hydrolase subunit 1; TIGRFAM: Urea carboxylase; Allophanate hydrolase subunit 2; KEGG: nmu:Nmul_A0943 allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; Biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin/lipoyl attachment; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthetase, large subunit, ATP-binding; urea carboxylase 49187 10296709 NAL212_0208 Nitrosomonas sp. AL212 urea carboxylase YP_004293327.1 45564 R 153948 CDS YP_004293328.1 325980926 10296710 complement(49192..49851) 1 NC_015222.1 KEGG: net:Neut_2474 hypothetical protein; TIGRFAM: Urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989; urea carboxylase-associated protein 1 49851 10296710 NAL212_0209 Nitrosomonas sp. AL212 urea carboxylase-associated protein 1 YP_004293328.1 49192 R 153948 CDS YP_004293329.1 325980927 10296711 complement(49848..50573) 1 NC_015222.1 KEGG: nmu:Nmul_A0941 hypothetical protein; TIGRFAM: Urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989; urea carboxylase-associated protein 2 50573 10296711 NAL212_0210 Nitrosomonas sp. AL212 urea carboxylase-associated protein 2 YP_004293329.1 49848 R 153948 CDS YP_004293330.1 325980928 10296712 complement(50570..52003) 1 NC_015222.1 PFAM: Amino acid permease domain; KEGG: nmu:Nmul_A0940 amino acid permease-associated region; amino acid permease-associated protein 52003 10296712 NAL212_0211 Nitrosomonas sp. AL212 amino acid permease-associated protein YP_004293330.1 50570 R 153948 CDS YP_004293331.1 325980929 10296713 complement(52355..52990) 1 NC_015222.1 PFAM: Exopolysaccharide synthesis, ExoD; KEGG: neu:NE0797 hypothetical protein; exopolysaccharide synthesis exoD 52990 10296713 NAL212_0212 Nitrosomonas sp. AL212 exopolysaccharide synthesis exoD YP_004293331.1 52355 R 153948 CDS YP_004293332.1 325980930 10296714 complement(53575..55512) 1 NC_015222.1 KEGG: npu:Npun_R5402 FG-GAP repeat-containing protein; PFAM: FG-GAP; SMART: Integrin alpha beta-propellor; FG-GAP repeat-containing protein 55512 10296714 NAL212_0213 Nitrosomonas sp. AL212 FG-GAP repeat-containing protein YP_004293332.1 53575 R 153948 CDS YP_004293333.1 325980931 10296715 55917..56393 1 NC_015222.1 KEGG: cwo:Cwoe_3047 hypothetical protein; hypothetical protein 56393 10296715 NAL212_0214 Nitrosomonas sp. AL212 hypothetical protein YP_004293333.1 55917 D 153948 CDS YP_004293334.1 325980932 10296716 56403..56870 1 NC_015222.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: hse:Hsero_1607 transcription regulator protein; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 56870 10296716 NAL212_0215 Nitrosomonas sp. AL212 MerR family transcriptional regulator YP_004293334.1 56403 D 153948 CDS YP_004293335.1 325980933 10296717 56917..58515 1 NC_015222.1 KEGG: fbc:FB2170_15773 TPR repeat protein; hypothetical protein 58515 10296717 NAL212_0216 Nitrosomonas sp. AL212 hypothetical protein YP_004293335.1 56917 D 153948 CDS YP_004293336.1 325980934 10296718 58617..58958 1 NC_015222.1 KEGG: dmo:Dmoj_GI23312 GI23312 gene product from transcript GI23312-RA; hypothetical protein 58958 10296718 NAL212_0217 Nitrosomonas sp. AL212 hypothetical protein YP_004293336.1 58617 D 153948 CDS YP_004293337.1 325980935 10296719 59183..60514 1 NC_015222.1 PFAM: Outer membrane efflux protein; KEGG: nmu:Nmul_A1408 outer membrane efflux protein; outer membrane efflux protein 60514 10296719 NAL212_0218 Nitrosomonas sp. AL212 outer membrane efflux protein YP_004293337.1 59183 D 153948 CDS YP_004293338.1 325980936 10296720 60534..62108 1 NC_015222.1 KEGG: nmu:Nmul_A1407 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Copper binding periplasmic protein CusF; RND family efflux transporter MFP subunit 62108 10296720 NAL212_0219 Nitrosomonas sp. AL212 RND family efflux transporter MFP subunit YP_004293338.1 60534 D 153948 CDS YP_004293339.1 325980937 10296721 62120..65242 1 NC_015222.1 KEGG: nmu:Nmul_A1406 heavy metal efflux pump CzcA; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; CzcA family heavy metal efflux pump 65242 10296721 NAL212_0220 Nitrosomonas sp. AL212 CzcA family heavy metal efflux pump YP_004293339.1 62120 D 153948 CDS YP_004293340.1 325980938 10296722 65947..68487 1 NC_015222.1 PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; Kelch repeat type 1; Cell surface receptor IPT/TIG; KEGG: svo:SVI_3719 serine protease, subtilase family; SMART: Kelch repeat type 1; subtilisin 68487 10296722 NAL212_0221 Nitrosomonas sp. AL212 subtilisin YP_004293340.1 65947 D 153948 CDS YP_004293341.1 325980939 10296723 complement(68545..69399) 1 NC_015222.1 KEGG: nmu:Nmul_A0139 hypothetical protein; hypothetical protein 69399 10296723 NAL212_0222 Nitrosomonas sp. AL212 hypothetical protein YP_004293341.1 68545 R 153948 CDS YP_004293342.1 325980940 10296724 complement(69408..71135) 1 NC_015222.1 PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: gca:Galf_2918 restriction modification system DNA specificity domain; restriction modification system DNA specificity domain 71135 10296724 NAL212_0223 Nitrosomonas sp. AL212 restriction modification system DNA specificity domain YP_004293342.1 69408 R 153948 CDS YP_004293343.1 325980941 10296725 complement(71132..72331) 1 NC_015222.1 SMART: ATPase, AAA+ type, core; KEGG: geo:Geob_1221 ATPase; AAA ATPase 72331 10296725 NAL212_0224 Nitrosomonas sp. AL212 AAA ATPase YP_004293343.1 71132 R 153948 CDS YP_004293344.1 325980942 10296726 complement(72444..73913) 1 NC_015222.1 manually curated; KEGG: gca:Galf_2917 site-specific DNA-methyltransferase (adenine-specific); PFAM: DNA methylase, adenine-specific; adenine-specific DNA-methyltransferase 73913 10296726 NAL212_0225 Nitrosomonas sp. AL212 adenine-specific DNA-methyltransferase YP_004293344.1 72444 R 153948 CDS YP_004293345.1 325980943 10296727 complement(73942..76305) 1 NC_015222.1 PFAM: Restriction endonuclease, type I, EcoEI, R subunit/Type III, Res subunit, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; KEGG: gca:Galf_0381 type I site-specific deoxyribonuclease; SMART: DEAD-like helicase, N-terminal; Type I site-specific deoxyribonuclease 76305 10296727 NAL212_0226 Nitrosomonas sp. AL212 Type I site-specific deoxyribonuclease YP_004293345.1 73942 R 153948 CDS YP_004293346.1 325980944 10296728 76684..77334 1 NC_015222.1 PFAM: Methyltransferase type 11; KEGG: aoe:Clos_1084 methyltransferase type 11; type 11 methyltransferase 77334 10296728 NAL212_0227 Nitrosomonas sp. AL212 type 11 methyltransferase YP_004293346.1 76684 D 153948 CDS YP_004293347.1 325980945 10296729 complement(77382..77999) 1 NC_015222.1 KEGG: neu:NE0981 HhH-GPD; PFAM: HhH-GPD domain; SMART: HhH-GPD domain; Helix-hairpin-helix DNA-binding motif, class 1; HhH-GPD family protein 77999 10296729 NAL212_0228 Nitrosomonas sp. AL212 HhH-GPD family protein YP_004293347.1 77382 R 153948 CDS YP_004293348.1 325980946 10296730 78311..78757 1 NC_015222.1 KEGG: nmu:Nmul_A2503 cell division protein MraZ; TIGRFAM: MraZ; PFAM: MraZ domain; MraZ protein 78757 10296730 NAL212_0229 Nitrosomonas sp. AL212 MraZ protein YP_004293348.1 78311 D 153948 CDS YP_004293349.1 325980947 10296731 78776..79702 1 NC_015222.1 KEGG: nmu:Nmul_A2502 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; S-adenosyl-methyltransferase MraW 79702 10296731 NAL212_0230 Nitrosomonas sp. AL212 S-adenosyl-methyltransferase MraW YP_004293349.1 78776 D 153948 CDS YP_004293350.1 325980948 10296732 79726..80028 1 NC_015222.1 KEGG: mfa:Mfla_2276 cell division protein, FtsL -like protein; TIGRFAM: Cell division protein, FtsL -like; PFAM: Cell division protein FtsL; cell division protein FtsL 80028 10296732 NAL212_0231 Nitrosomonas sp. AL212 cell division protein FtsL YP_004293350.1 79726 D 153948 CDS YP_004293351.1 325980949 10296733 80025..81752 1 NC_015222.1 KEGG: nmu:Nmul_A2500 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; peptidoglycan glycosyltransferase 81752 10296733 NAL212_0232 Nitrosomonas sp. AL212 peptidoglycan glycosyltransferase YP_004293351.1 80025 D 153948 CDS YP_004293352.1 325980950 10296734 81758..83284 1 NC_015222.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: neu:NE0986 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; UDP-N-acetylmuramyl tripeptide synthetase 83284 10296734 NAL212_0233 Nitrosomonas sp. AL212 UDP-N-acetylmuramyl tripeptide synthetase YP_004293352.1 81758 D 153948 CDS YP_004293353.1 325980951 10296735 83281..84681 1 NC_015222.1 TIGRFAM: UDP-MurNAc-pentapeptide synthetase; KEGG: nmu:Nmul_A2498 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 84681 10296735 NAL212_0234 Nitrosomonas sp. AL212 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase YP_004293353.1 83281 D 153948 CDS YP_004293354.1 325980952 10296736 84672..85757 1 NC_015222.1 KEGG: nmu:Nmul_A2497 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; PFAM: Glycosyl transferase, family 4; phospho-N-acetylmuramoyl-pentapeptide- transferase 85757 10296736 NAL212_0235 Nitrosomonas sp. AL212 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_004293354.1 84672 D 153948 CDS YP_004293355.1 325980953 10296737 85754..87169 1 NC_015222.1 KEGG: neu:NE0989 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal; UDP-N-acetylmuramoylalanine--D-glutamate ligase 87169 10296737 NAL212_0236 Nitrosomonas sp. AL212 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_004293355.1 85754 D 153948 CDS YP_004293356.1 325980954 10296738 87176..88336 1 NC_015222.1 KEGG: nmu:Nmul_A2495 cell cycle protein; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein; cell division protein FtsW 88336 10296738 NAL212_0237 Nitrosomonas sp. AL212 cell division protein FtsW YP_004293356.1 87176 D 153948 CDS YP_004293357.1 325980955 10296739 88333..89424 1 NC_015222.1 TIGRFAM: N-acetylglucosaminyltransferase, MurG; KEGG: nmu:Nmul_A2494 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: Glycosyl transferase, family 28, C-terminal; Glycosyl transferase, family 28; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 89424 10296739 NAL212_0238 Nitrosomonas sp. AL212 UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase YP_004293357.1 88333 D 153948 CDS YP_004293358.1 325980956 10296740 89414..90841 1 NC_015222.1 TIGRFAM: UDP-N-acetylmuramate-alanine ligase; KEGG: nmu:Nmul_A2493 UDP-N-acetylmuramate--L-alanine ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; UDP-N-acetylmuramate--L-alanine ligase 90841 10296740 NAL212_0239 Nitrosomonas sp. AL212 UDP-N-acetylmuramate--L-alanine ligase YP_004293358.1 89414 D 153948 CDS YP_004293359.1 325980957 10296741 90855..91844 1 NC_015222.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: neu:NE0993 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; UDP-N-acetylenolpyruvoylglucosamine reductase 91844 10296741 NAL212_0240 Nitrosomonas sp. AL212 UDP-N-acetylenolpyruvoylglucosamine reductase YP_004293359.1 90855 D 153948 CDS YP_004293360.1 325980958 10296742 91844..92761 1 NC_015222.1 PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: nmu:Nmul_A2491 D-alanine--D-alanine ligase; D-alanine--D-alanine ligase 92761 10296742 NAL212_0241 Nitrosomonas sp. AL212 D-alanine--D-alanine ligase YP_004293360.1 91844 D 153948 CDS YP_004293361.1 325980959 10296743 92751..93527 1 NC_015222.1 PFAM: Cell division protein FtsQ; Polypeptide-transport-associated, FtsQ-type; KEGG: net:Neut_0242 polypeptide-transport-associated domain-containing protein; cell division protein FtsQ 93527 10296743 NAL212_0242 Nitrosomonas sp. AL212 cell division protein FtsQ YP_004293361.1 92751 D 153948 CDS YP_004293362.1 325980960 10296744 93540..94778 1 NC_015222.1 TIGRFAM: Cell division protein family FtsA; PFAM: Cell division protein FtsA domain; KEGG: neu:NE0996 cell division protein FtsA; SMART: Cell division protein FtsA domain; cell division protein FtsA 94778 10296744 NAL212_0243 Nitrosomonas sp. AL212 cell division protein FtsA YP_004293362.1 93540 D 153948 CDS YP_004293363.1 325980961 10296745 94847..96004 1 NC_015222.1 TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; KEGG: net:Neut_0240 cell division protein FtsZ; SMART: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; cell division protein FtsZ 96004 10296745 NAL212_0244 Nitrosomonas sp. AL212 cell division protein FtsZ YP_004293363.1 94847 D 153948 CDS YP_004293364.1 325980962 10296746 complement(96237..97958) 1 NC_015222.1 TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; PAS fold-3; KEGG: mfa:Mfla_1933 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: Chemotaxis methyl-accepting receptor, signalling; PAS; PAC motif; HAMP linker domain; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 97958 10296746 NAL212_0245 Nitrosomonas sp. AL212 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor YP_004293364.1 96237 R 153948 CDS YP_004293365.1 325980963 10296747 complement(98244..99551) 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase; transposase IS4 family protein 99551 10296747 NAL212_0246 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004293365.1 98244 R 153948 CDS YP_004293366.1 325980964 10296749 complement(100447..105084) 1 NC_015222.1 KEGG: rpd:RPD_0591 DNA helicase, putative; UvrD type DNA helicase 105084 10296749 NAL212_0248 Nitrosomonas sp. AL212 UvrD type DNA helicase YP_004293366.1 100447 R 153948 CDS YP_004293367.1 325980965 10296750 complement(105603..108641) 1 NC_015222.1 PFAM: DNA-directed DNA polymerase, family B, mitochondria/virus; KEGG: mma:MM_3253 hypothetical protein; DNA polymerase type B 108641 10296750 NAL212_0249 Nitrosomonas sp. AL212 DNA polymerase type B YP_004293367.1 105603 R 153948 CDS YP_004293368.1 325980966 10296751 complement(108656..109549) 1 NC_015222.1 KEGG: ppr:PBPRB1378 hypothetical protein; hypothetical protein 109549 10296751 NAL212_0250 Nitrosomonas sp. AL212 hypothetical protein YP_004293368.1 108656 R 153948 CDS YP_004293369.1 325980967 10296752 complement(109637..110122) 1 NC_015222.1 KEGG: abi:Aboo_0388 hypothetical protein; hypothetical protein 110122 10296752 NAL212_0251 Nitrosomonas sp. AL212 hypothetical protein YP_004293369.1 109637 R 153948 CDS YP_004293370.1 325980968 10296753 complement(110115..110762) 1 NC_015222.1 KEGG: abi:Aboo_0389 hypothetical protein; hypothetical protein 110762 10296753 NAL212_0252 Nitrosomonas sp. AL212 hypothetical protein YP_004293370.1 110115 R 153948 CDS YP_004293371.1 325980969 10296754 110985..111890 1 NC_015222.1 KEGG: bll:BLJ_2035 hypothetical protein; hypothetical protein 111890 10296754 NAL212_0253 Nitrosomonas sp. AL212 hypothetical protein YP_004293371.1 110985 D 153948 CDS YP_004293372.1 325980970 10296755 111883..113175 1 NC_015222.1 KEGG: mmh:Mmah_1312 CRISPR-associated protein, Cas1 family; TIGRFAM: CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1; CRISPR-associated protein Cas1 113175 10296755 NAL212_0254 Nitrosomonas sp. AL212 CRISPR-associated protein Cas1 YP_004293372.1 111883 D 153948 CDS YP_004293373.1 325980971 10296756 complement(113221..114018) 1 NC_015222.1 KEGG: bce:BC1266 integral membrane protein; hypothetical protein 114018 10296756 NAL212_0255 Nitrosomonas sp. AL212 hypothetical protein YP_004293373.1 113221 R 153948 CDS YP_004293374.1 325980972 10296757 114357..114653 1 NC_015222.1 KEGG: dat:HRM2_44620 hypothetical protein; hypothetical protein 114653 10296757 NAL212_0256 Nitrosomonas sp. AL212 hypothetical protein YP_004293374.1 114357 D 153948 CDS YP_004293375.1 325980973 10296758 114641..114991 1 NC_015222.1 KEGG: eba:ebB55 transposase, fragment; manually curated; PFAM: Transposase (putative), IS66 Orf2-like; IS66 Orf2 family protein 114991 10296758 NAL212_0257 Nitrosomonas sp. AL212 IS66 Orf2 family protein YP_004293375.1 114641 D 153948 CDS YP_004293376.1 325980974 10296759 115045..116628 1 NC_015222.1 PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase; transposase IS66 116628 10296759 NAL212_0258 Nitrosomonas sp. AL212 transposase IS66 YP_004293376.1 115045 D 153948 CDS YP_004293377.1 325980975 10296760 complement(116765..117769) 1 NC_015222.1 TIGRFAM: DNA polymerase III, delta subunit; KEGG: nmu:Nmul_A0513 DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta 117769 10296760 NAL212_0259 Nitrosomonas sp. AL212 DNA polymerase III subunit delta YP_004293377.1 116765 R 153948 CDS YP_004293378.1 325980976 10296761 complement(117803..118321) 1 NC_015222.1 PFAM: Lipopolysccharide assembly, LptE; KEGG: nmu:Nmul_A0512 rare lipoprotein B; Rare lipoprotein B 118321 10296761 NAL212_0260 Nitrosomonas sp. AL212 Rare lipoprotein B YP_004293378.1 117803 R 153948 CDS YP_004293379.1 325980977 10296762 complement(118342..120987) 1 NC_015222.1 TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: nmu:Nmul_A0511 leucyl-tRNA synthetase; leucyl-tRNA synthetase 120987 10296762 NAL212_0261 Nitrosomonas sp. AL212 leucyl-tRNA synthetase YP_004293379.1 118342 R 153948 CDS YP_004293380.1 325980978 10296763 complement(121217..121423) 1 NC_015222.1 PFAM: Dodecin flavoprotein; KEGG: mca:MCA3058 hypothetical protein; hypothetical protein 121423 10296763 NAL212_0262 Nitrosomonas sp. AL212 hypothetical protein YP_004293380.1 121217 R 153948 CDS YP_004293381.1 325980979 10296764 121601..122386 1 NC_015222.1 PFAM: Peptidase M48; KEGG: neu:NE1475 hypothetical protein; peptidase M48 Ste24p 122386 10296764 NAL212_0263 Nitrosomonas sp. AL212 peptidase M48 Ste24p YP_004293381.1 121601 D 153948 CDS YP_004293382.1 325980980 10296765 complement(122391..122777) 1 NC_015222.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_C0588 putative dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 122777 10296765 NAL212_0264 Nitrosomonas sp. AL212 glyoxalase/bleomycin resistance protein/dioxygenase YP_004293382.1 122391 R 153948 CDS YP_004293383.1 325980981 10296766 123080..123571 1 NC_015222.1 KEGG: net:Neut_1168 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; CheW protein 123571 10296766 NAL212_0265 Nitrosomonas sp. AL212 CheW protein YP_004293383.1 123080 D 153948 CDS YP_004293384.1 325980982 10296767 123636..125354 1 NC_015222.1 KEGG: tbd:Tbd_1622 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; methyl-accepting chemotaxis sensory transducer 125354 10296767 NAL212_0266 Nitrosomonas sp. AL212 methyl-accepting chemotaxis sensory transducer YP_004293384.1 123636 D 153948 CDS YP_004293385.1 325980983 10296768 complement(125818..126786) 1 NC_015222.1 KEGG: net:Neut_1587 rare lipoprotein A; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Barwin-related endoglucanase; Sporulation-related domain; rare lipoprotein A 126786 10296768 NAL212_0267 Nitrosomonas sp. AL212 rare lipoprotein A YP_004293385.1 125818 R 153948 CDS YP_004293386.1 325980984 10296769 complement(126783..127883) 1 NC_015222.1 KEGG: neu:NE2066 cell cycle proteins; TIGRFAM: Rod shape-determining protein RodA; PFAM: Cell cycle protein; rod shape-determining protein RodA 127883 10296769 NAL212_0268 Nitrosomonas sp. AL212 rod shape-determining protein RodA YP_004293386.1 126783 R 153948 CDS YP_004293387.1 325980985 10296770 complement(127935..129848) 1 NC_015222.1 TIGRFAM: Penicillin-binding protein 2; KEGG: nmu:Nmul_A0317 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; penicillin-binding protein 2 129848 10296770 NAL212_0269 Nitrosomonas sp. AL212 penicillin-binding protein 2 YP_004293387.1 127935 R 153948 CDS YP_004293388.1 325980986 10296771 complement(129845..130420) 1 NC_015222.1 KEGG: nmu:Nmul_A0318 rod shape-determining protein MreD; TIGRFAM: Cell shape-determining protein MreD; PFAM: Cell shape-determining protein MreD; rod shape-determining protein MreD 130420 10296771 NAL212_0270 Nitrosomonas sp. AL212 rod shape-determining protein MreD YP_004293388.1 129845 R 153948 CDS YP_004293389.1 325980987 10296772 complement(130377..131267) 1 NC_015222.1 KEGG: neu:NE2069 rod shape-determining protein MreC; TIGRFAM: Rod shape-determining protein MreC, subtype; PFAM: Rod shape-determining protein MreC; rod shape-determining protein MreC 131267 10296772 NAL212_0271 Nitrosomonas sp. AL212 rod shape-determining protein MreC YP_004293389.1 130377 R 153948 CDS YP_004293390.1 325980988 10296773 complement(131346..132404) 1 NC_015222.1 KEGG: nmu:Nmul_A0320 rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein 132404 10296773 NAL212_0272 Nitrosomonas sp. AL212 MreB/Mrl family cell shape determining protein YP_004293390.1 131346 R 153948 CDS YP_004293391.1 325980989 10296774 132535..132822 1 NC_015222.1 KEGG: nmu:Nmul_A0321 aspartyl/glutamyl-tRNA amidotransferase subunit C; TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C 132822 10296774 NAL212_0273 Nitrosomonas sp. AL212 glutamyl-tRNA(Gln) amidotransferase subunit C YP_004293391.1 132535 D 153948 CDS YP_004293392.1 325980990 10296775 132914..134362 1 NC_015222.1 TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit; KEGG: nmu:Nmul_A0322 aspartyl/glutamyl-tRNA amidotransferase subunit A; PFAM: Amidase; glutamyl-tRNA(Gln) amidotransferase subunit A 134362 10296775 NAL212_0274 Nitrosomonas sp. AL212 glutamyl-tRNA(Gln) amidotransferase subunit A YP_004293392.1 132914 D 153948 CDS YP_004293393.1 325980991 10296776 134408..135847 1 NC_015222.1 TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Asn/Gln amidotransferase; KEGG: neu:NE2073 aspartyl/glutamyl-tRNA amidotransferase subunit B; SMART: Asn/Gln amidotransferase; glutamyl-tRNA(Gln) amidotransferase subunit B 135847 10296776 NAL212_0275 Nitrosomonas sp. AL212 glutamyl-tRNA(Gln) amidotransferase subunit B YP_004293393.1 134408 D 153948 CDS YP_004293394.1 325980992 10296777 complement(135913..136284) 1 NC_015222.1 KEGG: nwa:Nwat_1721 putative thiol-disulfide oxidoreductase DCC; manually curated; PFAM: Putative thiol-disulphide oxidoreductase DCC; thiol-disulfide oxidoreductase DCC 136284 10296777 NAL212_0276 Nitrosomonas sp. AL212 thiol-disulfide oxidoreductase DCC YP_004293394.1 135913 R 153948 CDS YP_004293395.1 325980993 10296778 complement(136217..136507) 1 NC_015222.1 KEGG: tcr:509791.80 hypothetical protein; hypothetical protein 136507 10296778 NAL212_0277 Nitrosomonas sp. AL212 hypothetical protein YP_004293395.1 136217 R 153948 CDS YP_004293396.1 325980994 10296779 136748..145408 1 NC_015222.1 PFAM: Protein of unknown function DUF2329; Glycosyltransferase 36 associated; Glycosyltransferase 36; Putative carbohydrate binding; KEGG: tbd:Tbd_1304 cyclic beta 1-2 glucan synthetase; hypothetical protein 145408 10296779 NAL212_0278 Nitrosomonas sp. AL212 hypothetical protein YP_004293396.1 136748 D 153948 CDS YP_004293397.1 325980995 10296780 complement(145555..148290) 1 NC_015222.1 PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; KEGG: neu:NE0564 multicopper oxidase type 1; multicopper oxidase type 3 148290 10296780 NAL212_0279 Nitrosomonas sp. AL212 multicopper oxidase type 3 YP_004293397.1 145555 R 153948 CDS YP_004293398.1 325980996 10296781 complement(148341..149345) 1 NC_015222.1 PFAM: Multicopper oxidase, type 3; KEGG: neu:NE0565 hypothetical protein; multicopper oxidase type 3 149345 10296781 NAL212_0280 Nitrosomonas sp. AL212 multicopper oxidase type 3 YP_004293398.1 148341 R 153948 CDS YP_004293399.1 325980997 10296782 complement(149569..150294) 1 NC_015222.1 KEGG: sus:Acid_1755 two component LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; two component transcriptional regulator, LuxR family 150294 10296782 NAL212_0281 Nitrosomonas sp. AL212 two component transcriptional regulator, LuxR family YP_004293399.1 149569 R 153948 CDS YP_004293400.1 325980998 10296783 150747..151577 1 NC_015222.1 KEGG: net:Neut_0407 inositol-phosphate phosphatase; PFAM: Inositol monophosphatase; inositol-phosphate phosphatase 151577 10296783 NAL212_0282 Nitrosomonas sp. AL212 inositol-phosphate phosphatase YP_004293400.1 150747 D 153948 CDS YP_004293401.1 325980999 10296784 151730..153019 1 NC_015222.1 PFAM: Sodium:dicarboxylate symporter; KEGG: hna:Hneap_1097 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 153019 10296784 NAL212_0283 Nitrosomonas sp. AL212 sodium:dicarboxylate symporter YP_004293401.1 151730 D 153948 CDS YP_004293402.1 325981000 10296785 complement(153075..153275) 1 NC_015222.1 PFAM: Protein of unknown function DUF466; KEGG: neu:NE2409 hypothetical protein; hypothetical protein 153275 10296785 NAL212_0284 Nitrosomonas sp. AL212 hypothetical protein YP_004293402.1 153075 R 153948 CDS YP_004293403.1 325981001 10296786 complement(153294..155366) 1 NC_015222.1 PFAM: Carbon starvation protein CstA; KEGG: neu:NE2410 carbon starvation protein CstA; carbon starvation protein CstA 155366 10296786 NAL212_0285 Nitrosomonas sp. AL212 carbon starvation protein CstA YP_004293403.1 153294 R 153948 CDS YP_004293404.1 325981002 10296787 complement(155420..156046) 1 NC_015222.1 KEGG: nmu:Nmul_A2319 putative transcriptional regulator; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote; chromosome segregation and condensation protein ScpB 156046 10296787 NAL212_0286 Nitrosomonas sp. AL212 chromosome segregation and condensation protein ScpB YP_004293404.1 155420 R 153948 CDS YP_004293405.1 325981003 10296788 complement(156012..156827) 1 NC_015222.1 PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; KEGG: nmu:Nmul_A2318 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA 156827 10296788 NAL212_0287 Nitrosomonas sp. AL212 chromosome segregation and condensation protein ScpA YP_004293405.1 156012 R 153948 CDS YP_004293406.1 325981004 10296789 complement(156865..158067) 1 NC_015222.1 TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: nmu:Nmul_A2317 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; tryptophanyl-tRNA synthetase 158067 10296789 NAL212_0288 Nitrosomonas sp. AL212 tryptophanyl-tRNA synthetase YP_004293406.1 156865 R 153948 CDS YP_004293407.1 325981005 10296790 complement(158094..158759) 1 NC_015222.1 PFAM: Peptidase M50; KEGG: net:Neut_2041 peptidase M50; peptidase M50 158759 10296790 NAL212_0289 Nitrosomonas sp. AL212 peptidase M50 YP_004293407.1 158094 R 153948 CDS YP_004293408.1 325981006 10296791 complement(158752..159384) 1 NC_015222.1 KEGG: neu:NE1725 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; Sua5/YciO/YrdC/YwlC family protein 159384 10296791 NAL212_0290 Nitrosomonas sp. AL212 Sua5/YciO/YrdC/YwlC family protein YP_004293408.1 158752 R 153948 CDS YP_004293409.1 325981007 10296792 complement(159408..160280) 1 NC_015222.1 KEGG: net:Neut_2039 phosphotransferase domain-containing protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; PHP domain-containing protein 160280 10296792 NAL212_0291 Nitrosomonas sp. AL212 PHP domain-containing protein YP_004293409.1 159408 R 153948 CDS YP_004293410.1 325981008 10296793 160310..160411 1 NC_015222.1 hypothetical protein 160411 10296793 NAL212_0292 Nitrosomonas sp. AL212 hypothetical protein YP_004293410.1 160310 D 153948 CDS YP_004293411.1 325981009 10296794 160408..161631 1 NC_015222.1 PFAM: NnrS; KEGG: neu:NE1723 hypothetical protein; NnrS family protein 161631 10296794 NAL212_0293 Nitrosomonas sp. AL212 NnrS family protein YP_004293411.1 160408 D 153948 CDS YP_004293412.1 325981010 10296795 161819..162232 1 NC_015222.1 KEGG: dpe:Dper_GL15607 GL15607 gene product from transcript GL15607-RA; hypothetical protein 162232 10296795 NAL212_0294 Nitrosomonas sp. AL212 hypothetical protein YP_004293412.1 161819 D 153948 CDS YP_004293413.1 325981011 10296796 complement(162341..162514) 1 NC_015222.1 hypothetical protein 162514 10296796 NAL212_0295 Nitrosomonas sp. AL212 hypothetical protein YP_004293413.1 162341 R 153948 CDS YP_004293414.1 325981012 10296798 complement(162731..163873) 1 NC_015222.1 PFAM: Acyltransferase 3; KEGG: bid:Bind_2849 acyltransferase 3; acyltransferase 3 163873 10296798 NAL212_0297 Nitrosomonas sp. AL212 acyltransferase 3 YP_004293414.1 162731 R 153948 CDS YP_004293415.1 325981013 10296799 complement(163954..164490) 1 NC_015222.1 KEGG: hje:HacjB3_14735 histone deacetylase superfamily protein; hypothetical protein 164490 10296799 NAL212_0298 Nitrosomonas sp. AL212 hypothetical protein YP_004293415.1 163954 R 153948 CDS YP_004293416.1 325981014 10296800 164899..166116 1 NC_015222.1 KEGG: neu:NE0034 aminotransferase class-V; PFAM: Aminotransferase, class V/Cysteine desulfurase; serine--pyruvate transaminase 166116 10296800 NAL212_0299 Nitrosomonas sp. AL212 serine--pyruvate transaminase YP_004293416.1 164899 D 153948 CDS YP_004293417.1 325981015 10296801 166206..167219 1 NC_015222.1 PFAM: Glycosyl transferase, family 4; KEGG: nmu:Nmul_A0632 glycosyl transferase family protein; glycosyl transferase family protein 167219 10296801 NAL212_0300 Nitrosomonas sp. AL212 glycosyl transferase family protein YP_004293417.1 166206 D 153948 CDS YP_004293418.1 325981016 10296802 167225..169114 1 NC_015222.1 PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: nmu:Nmul_A0631 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD 169114 10296802 NAL212_0301 Nitrosomonas sp. AL212 polysaccharide biosynthesis protein CapD YP_004293418.1 167225 D 153948 CDS YP_004293419.1 325981017 10296803 complement(169143..170855) 1 NC_015222.1 KEGG: gca:Galf_0315 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter, transmembrane domain; ABC transporter-like; xenobiotic-transporting ATPase 170855 10296803 NAL212_0302 Nitrosomonas sp. AL212 xenobiotic-transporting ATPase YP_004293419.1 169143 R 153948 CDS YP_004293420.1 325981018 10296804 171006..171938 1 NC_015222.1 TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; KEGG: pol:Bpro_4018 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase 171938 10296804 NAL212_0303 Nitrosomonas sp. AL212 glucose-1-phosphate thymidylyltransferase YP_004293420.1 171006 D 153948 CDS YP_004293421.1 325981019 10296805 171955..172500 1 NC_015222.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related; KEGG: net:Neut_2244 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related; dTDP-4-dehydrorhamnose 3,5-epimerase 172500 10296805 NAL212_0304 Nitrosomonas sp. AL212 dTDP-4-dehydrorhamnose 3,5-epimerase YP_004293421.1 171955 D 153948 CDS YP_004293422.1 325981020 10296806 172553..173902 1 NC_015222.1 TIGRFAM: DNA repair protein RadA; PFAM: Circadian clock protein KaiC/DNA repair protein RadA; Peptidase S16, Lon C-terminal; KEGG: nmu:Nmul_A1803 DNA repair protein RadA; SMART: ATPase, AAA+ type, core; DNA repair protein RadA 173902 10296806 NAL212_0305 Nitrosomonas sp. AL212 DNA repair protein RadA YP_004293422.1 172553 D 153948 CDS YP_004293423.1 325981021 10296807 173986..174789 1 NC_015222.1 PFAM: Ceramidase; KEGG: nmu:Nmul_A1801 hypothetical protein; alkaline phytoceramidase 174789 10296807 NAL212_0306 Nitrosomonas sp. AL212 alkaline phytoceramidase YP_004293423.1 173986 D 153948 CDS YP_004293424.1 325981022 10296808 175246..177069 1 NC_015222.1 KEGG: nmu:Nmul_A0231 acyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; long-chain fatty acid--ACP ligase 177069 10296808 NAL212_0307 Nitrosomonas sp. AL212 long-chain fatty acid--ACP ligase YP_004293424.1 175246 D 153948 CDS YP_004293425.1 325981023 10296809 177075..177989 1 NC_015222.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: nmu:Nmul_A0230 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 177989 10296809 NAL212_0308 Nitrosomonas sp. AL212 NAD-dependent epimerase/dehydratase YP_004293425.1 177075 D 153948 CDS YP_004293426.1 325981024 10296810 178019..178276 1 NC_015222.1 PFAM: Phosphopantetheine-binding; KEGG: neu:NE1656 phosphopantetheine attachment site; phosphopantetheine-binding protein 178276 10296810 NAL212_0309 Nitrosomonas sp. AL212 phosphopantetheine-binding protein YP_004293426.1 178019 D 153948 CDS YP_004293427.1 325981025 10296811 178276..179469 1 NC_015222.1 KEGG: neu:NE1655 aminotransferase class-I; PFAM: Aminotransferase, class I/classII; 8-amino-7-oxononanoate synthase 179469 10296811 NAL212_0310 Nitrosomonas sp. AL212 8-amino-7-oxononanoate synthase YP_004293427.1 178276 D 153948 CDS YP_004293428.1 325981026 10296812 179492..180247 1 NC_015222.1 KEGG: sme:SMc01711 hypothetical protein; hypothetical protein 180247 10296812 NAL212_0311 Nitrosomonas sp. AL212 hypothetical protein YP_004293428.1 179492 D 153948 CDS YP_004293429.1 325981027 10296813 complement(180388..181722) 1 NC_015222.1 KEGG: chu:CHU_2279 PhoH-related protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc; phoH family protein 181722 10296813 NAL212_0312 Nitrosomonas sp. AL212 phoH family protein YP_004293429.1 180388 R 153948 CDS YP_004293430.1 325981028 10296815 complement(182215..183369) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region; integrase catalytic region 183369 10296815 NAL212_0314 Nitrosomonas sp. AL212 integrase catalytic region YP_004293430.1 182215 R 153948 CDS YP_004293431.1 325981029 10296816 184120..184440 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 184440 10296816 NAL212_0315 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004293431.1 184120 D 153948 CDS YP_004293432.1 325981030 10296817 184440..185339 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit; integrase catalytic region 185339 10296817 NAL212_0316 Nitrosomonas sp. AL212 integrase catalytic region YP_004293432.1 184440 D 153948 CDS YP_004293433.1 325981031 10296818 185452..186537 1 NC_015222.1 PFAM: Transposase, IS116/IS110/IS902; KEGG: ecp:ECP_4551 putative transposase; transposase IS116/IS110/IS902 family protein 186537 10296818 NAL212_0317 Nitrosomonas sp. AL212 transposase IS116/IS110/IS902 family protein YP_004293433.1 185452 D 153948 CDS YP_004293434.1 325981032 10296819 complement(186756..189059) 1 NC_015222.1 KEGG: mms:mma_2809 transposase IstA; PFAM: IstB-like ATP-binding protein; Integrase, catalytic core; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 189059 10296819 NAL212_0318 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004293434.1 186756 R 153948 CDS YP_004293435.1 325981033 10296820 complement(189245..189439) 1 NC_015222.1 KEGG: pmm:PMM1245 hypothetical protein; hypothetical protein 189439 10296820 NAL212_0319 Nitrosomonas sp. AL212 hypothetical protein YP_004293435.1 189245 R 153948 CDS YP_004293436.1 325981034 10296822 190694..191968 1 NC_015222.1 KEGG: bfo:BRAFLDRAFT_118313 hypothetical protein; hypothetical protein 191968 10296822 NAL212_0321 Nitrosomonas sp. AL212 hypothetical protein YP_004293436.1 190694 D 153948 CDS YP_004293437.1 325981035 10296823 192080..192871 1 NC_015222.1 KEGG: par:Psyc_1264 hypothetical protein; hypothetical protein 192871 10296823 NAL212_0322 Nitrosomonas sp. AL212 hypothetical protein YP_004293437.1 192080 D 153948 CDS YP_004293438.1 325981036 10296824 complement(193227..195179) 1 NC_015222.1 KEGG: rlg:Rleg_0196 hypothetical protein; hypothetical protein 195179 10296824 NAL212_0323 Nitrosomonas sp. AL212 hypothetical protein YP_004293438.1 193227 R 153948 CDS YP_004293439.1 325981037 10296825 195560..196465 1 NC_015222.1 KEGG: meh:M301_2200 hypothetical protein; hypothetical protein 196465 10296825 NAL212_0324 Nitrosomonas sp. AL212 hypothetical protein YP_004293439.1 195560 D 153948 CDS YP_004293440.1 325981038 10296826 196582..197964 1 NC_015222.1 PFAM: Replication initiation factor; KEGG: dar:Daro_1039 hypothetical protein; replication initiation factor 197964 10296826 NAL212_0325 Nitrosomonas sp. AL212 replication initiation factor YP_004293440.1 196582 D 153948 CDS YP_004293441.1 325981039 10296828 198167..199180 1 NC_015222.1 PFAM: Integrase, catalytic core, phage; KEGG: afr:AFE_0995 site-specific recombinase, phage integrase family; integrase family protein 199180 10296828 NAL212_0327 Nitrosomonas sp. AL212 integrase family protein YP_004293441.1 198167 D 153948 CDS YP_004293442.1 325981040 10296829 199477..199848 1 NC_015222.1 KEGG: neu:NE0270 hypothetical protein; hypothetical protein 199848 10296829 NAL212_0328 Nitrosomonas sp. AL212 hypothetical protein YP_004293442.1 199477 D 153948 CDS YP_004293443.1 325981041 10296830 199854..201152 1 NC_015222.1 KEGG: mes:Meso_3789 relaxase/mobilization nuclease domain-containing protein; relaxase/mobilization nuclease domain-containing protein 201152 10296830 NAL212_0329 Nitrosomonas sp. AL212 relaxase/mobilization nuclease domain-containing protein YP_004293443.1 199854 D 153948 CDS YP_004293444.1 325981042 10296831 201190..201738 1 NC_015222.1 KEGG: cci:CC1G_11100 ankyrin repeat protein; hypothetical protein 201738 10296831 NAL212_0330 Nitrosomonas sp. AL212 hypothetical protein YP_004293444.1 201190 D 153948 CDS YP_004293445.1 325981043 10296832 complement(201774..202517) 1 NC_015222.1 PFAM: Glutaredoxin; KEGG: dsh:Dshi_3931 glutaredoxin; glutaredoxin 202517 10296832 NAL212_0331 Nitrosomonas sp. AL212 glutaredoxin YP_004293445.1 201774 R 153948 CDS YP_004293446.1 325981044 10296834 203179..203583 1 NC_015222.1 PFAM: Uncharacterised protein family YphA; KEGG: neu:NE1276 hypothetical protein; DoxX family protein 203583 10296834 NAL212_0333 Nitrosomonas sp. AL212 DoxX family protein YP_004293446.1 203179 D 153948 CDS YP_004293447.1 325981045 10296835 203849..204220 1 NC_015222.1 KEGG: kcr:Kcr_0174 hypothetical protein; hypothetical protein 204220 10296835 NAL212_0334 Nitrosomonas sp. AL212 hypothetical protein YP_004293447.1 203849 D 153948 CDS YP_004293448.1 325981046 10296836 204236..205018 1 NC_015222.1 KEGG: zin:ZICARI_039 putative cytochrome bo terminal oxidase subunit I/cytochrome bo terminal oxidase subunit III fusion protein; hypothetical protein 205018 10296836 NAL212_0335 Nitrosomonas sp. AL212 hypothetical protein YP_004293448.1 204236 D 153948 CDS YP_004293449.1 325981047 10296837 complement(205387..206970) 1 NC_015222.1 PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase; transposase IS66 206970 10296837 NAL212_0336 Nitrosomonas sp. AL212 transposase IS66 YP_004293449.1 205387 R 153948 CDS YP_004293450.1 325981048 10296838 complement(207024..207374) 1 NC_015222.1 KEGG: eba:ebB55 transposase, fragment; manually curated; PFAM: Transposase (putative), IS66 Orf2-like; IS66 Orf2 family protein 207374 10296838 NAL212_0337 Nitrosomonas sp. AL212 IS66 Orf2 family protein YP_004293450.1 207024 R 153948 CDS YP_004293451.1 325981049 10296839 complement(207362..207658) 1 NC_015222.1 KEGG: dat:HRM2_44620 hypothetical protein; hypothetical protein 207658 10296839 NAL212_0338 Nitrosomonas sp. AL212 hypothetical protein YP_004293451.1 207362 R 153948 CDS YP_004293452.1 325981050 10296841 complement(208137..209003) 1 NC_015222.1 KEGG: sto:ST2108 purine NTPase; hypothetical protein 209003 10296841 NAL212_0340 Nitrosomonas sp. AL212 hypothetical protein YP_004293452.1 208137 R 153948 CDS YP_004293453.1 325981051 10296842 complement(209070..209375) 1 NC_015222.1 KEGG: msv:Mesil_3324 hypothetical protein; hypothetical protein 209375 10296842 NAL212_0341 Nitrosomonas sp. AL212 hypothetical protein YP_004293453.1 209070 R 153948 CDS YP_004293454.1 325981052 10296843 209621..210181 1 NC_015222.1 KEGG: neu:NE0257 site-specific recombinase; PFAM: Resolvase, N-terminal; SMART: Resolvase, N-terminal; Resolvase domain 210181 10296843 NAL212_0342 Nitrosomonas sp. AL212 Resolvase domain YP_004293454.1 209621 D 153948 CDS YP_004293455.1 325981053 10296844 complement(210227..210733) 1 NC_015222.1 PFAM: Antirestriction; KEGG: hba:Hbal_0654 hypothetical protein; antirestriction ArdA family protein 210733 10296844 NAL212_0343 Nitrosomonas sp. AL212 antirestriction ArdA family protein YP_004293455.1 210227 R 153948 CDS YP_004293456.1 325981054 10296845 211086..211421 1 NC_015222.1 KEGG: bur:Bcep18194_B2516 hypothetical protein; TIGRFAM: Addiction module killer protein, HI1419; PFAM: Protein of unknown function DUF891; addiction module killer protein 211421 10296845 NAL212_0344 Nitrosomonas sp. AL212 addiction module killer protein YP_004293456.1 211086 D 153948 CDS YP_004293457.1 325981055 10296846 211414..211743 1 NC_015222.1 TIGRFAM: Addiction module antidote protein, HI1420; KEGG: rfe:RF_1316 transcriptional regulator; addiction module antidote protein 211743 10296846 NAL212_0345 Nitrosomonas sp. AL212 addiction module antidote protein YP_004293457.1 211414 D 153948 CDS YP_004293458.1 325981056 10296847 211895..212155 1 NC_015222.1 KEGG: neu:NE0262 hypothetical protein; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Uncharacterised protein family UPF0156/MetJ /Arc repressor; addiction module antidote protein 212155 10296847 NAL212_0346 Nitrosomonas sp. AL212 addiction module antidote protein YP_004293458.1 211895 D 153948 CDS YP_004293459.1 325981057 10296848 212299..213606 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase; transposase IS4 family protein 213606 10296848 NAL212_0347 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004293459.1 212299 D 153948 CDS YP_004293460.1 325981058 10296850 214678..217335 1 NC_015222.1 PFAM: PHP, C-terminal; KEGG: tin:Tint_3224 SMC domain protein; PHP domain-containing protein 217335 10296850 NAL212_0349 Nitrosomonas sp. AL212 PHP domain-containing protein YP_004293460.1 214678 D 153948 CDS YP_004293461.1 325981059 10296852 complement(218508..219581) 1 NC_015222.1 PFAM: Transposase, IS4-like; Transposase InsH, N-terminal; KEGG: dia:Dtpsy_3344 transposase IS4 family protein; transposase IS4 family protein 219581 10296852 NAL212_0351 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004293461.1 218508 R 153948 CDS YP_004293462.1 325981060 10296853 complement(219692..220597) 1 NC_015222.1 KEGG: pyo:PY01937 hypothetical protein; hypothetical protein 220597 10296853 NAL212_0352 Nitrosomonas sp. AL212 hypothetical protein YP_004293462.1 219692 R 153948 CDS YP_004293463.1 325981061 10296854 complement(220750..222381) 1 NC_015222.1 PFAM: Ti-type conjugative transfer system, TraG-like; KEGG: neu:NE0246 TraG protein; TRAG family protein 222381 10296854 NAL212_0353 Nitrosomonas sp. AL212 TRAG family protein YP_004293463.1 220750 R 153948 CDS YP_004293464.1 325981062 10296855 complement(222386..223678) 1 NC_015222.1 KEGG: neu:NE0245 hypothetical protein; hypothetical protein 223678 10296855 NAL212_0354 Nitrosomonas sp. AL212 hypothetical protein YP_004293464.1 222386 R 153948 CDS YP_004293465.1 325981063 10296856 complement(223692..224708) 1 NC_015222.1 KEGG: neu:NE0243 hypothetical protein; hypothetical protein 224708 10296856 NAL212_0355 Nitrosomonas sp. AL212 hypothetical protein YP_004293465.1 223692 R 153948 CDS YP_004293466.1 325981064 10296857 complement(224882..225247) 1 NC_015222.1 KEGG: neu:NE0242 hypothetical protein; hypothetical protein 225247 10296857 NAL212_0356 Nitrosomonas sp. AL212 hypothetical protein YP_004293466.1 224882 R 153948 CDS YP_004293467.1 325981065 10296858 225468..225734 1 NC_015222.1 KEGG: tdn:Suden_1398 translocation protein TolB; hypothetical protein 225734 10296858 NAL212_0357 Nitrosomonas sp. AL212 hypothetical protein YP_004293467.1 225468 D 153948 CDS YP_004293468.1 325981066 10296859 225854..229291 1 NC_015222.1 KEGG: neu:NE0240 hypothetical protein; PFAM: Sel1-like; SMART: Sel1-like; Sel1 domain-containing protein repeat-containing protein 229291 10296859 NAL212_0358 Nitrosomonas sp. AL212 Sel1 domain-containing protein repeat-containing protein YP_004293468.1 225854 D 153948 CDS YP_004293469.1 325981067 10296860 complement(229549..231132) 1 NC_015222.1 PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase; transposase IS66 231132 10296860 NAL212_0359 Nitrosomonas sp. AL212 transposase IS66 YP_004293469.1 229549 R 153948 CDS YP_004293470.1 325981068 10296861 complement(231186..231536) 1 NC_015222.1 KEGG: eba:ebB55 transposase, fragment; manually curated; PFAM: Transposase (putative), IS66 Orf2-like; IS66 Orf2 family protein 231536 10296861 NAL212_0360 Nitrosomonas sp. AL212 IS66 Orf2 family protein YP_004293470.1 231186 R 153948 CDS YP_004293471.1 325981069 10296862 complement(231524..231820) 1 NC_015222.1 KEGG: dat:HRM2_44620 hypothetical protein; hypothetical protein 231820 10296862 NAL212_0361 Nitrosomonas sp. AL212 hypothetical protein YP_004293471.1 231524 R 153948 CDS YP_004293472.1 325981070 10296863 231868..232149 1 NC_015222.1 manually curated; KEGG: neu:NE0237 hypothetical protein; hypothetical protein 232149 10296863 NAL212_0362 Nitrosomonas sp. AL212 hypothetical protein YP_004293472.1 231868 D 153948 CDS YP_004293473.1 325981071 10296864 232162..233715 1 NC_015222.1 KEGG: neu:NE0236 site-specific recombinase; PFAM: Resolvase, N-terminal; SMART: Resolvase, N-terminal; Resolvase domain 233715 10296864 NAL212_0363 Nitrosomonas sp. AL212 Resolvase domain YP_004293473.1 232162 D 153948 CDS YP_004293474.1 325981072 10296866 complement(234768..235550) 1 NC_015222.1 KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 235550 10296866 NAL212_0365 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004293474.1 234768 R 153948 CDS YP_004293475.1 325981073 10296867 complement(235547..236569) 1 NC_015222.1 PFAM: Integrase, catalytic core; Resolvase, helix-turn-helix domain; KEGG: pst:PSPTO_B0040 ISPsy4, transposase; integrase catalytic region 236569 10296867 NAL212_0366 Nitrosomonas sp. AL212 integrase catalytic region YP_004293475.1 235547 R 153948 CDS YP_004293476.1 325981074 10296868 237161..237427 1 NC_015222.1 PFAM: Plasmid stabilisation system; KEGG: bgl:bglu_1g12000 hypothetical protein; plasmid stabilization system 237427 10296868 NAL212_0367 Nitrosomonas sp. AL212 plasmid stabilization system YP_004293476.1 237161 D 153948 CDS YP_004293477.1 325981075 10296869 237424..237756 1 NC_015222.1 KEGG: lpf:lpl1091 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 237756 10296869 NAL212_0368 Nitrosomonas sp. AL212 helix-turn-helix domain-containing protein YP_004293477.1 237424 D 153948 CDS YP_004293478.1 325981076 10296870 complement(237777..238067) 1 NC_015222.1 KEGG: mar:MAE_59610 CopG/DNA-binding domain-containing protein; hypothetical protein 238067 10296870 NAL212_0369 Nitrosomonas sp. AL212 hypothetical protein YP_004293478.1 237777 R 153948 CDS YP_004293479.1 325981077 10296871 complement(238036..238305) 1 NC_015222.1 PFAM: Protein of unknown function DUF497; KEGG: mar:MAE_25610 hypothetical protein; hypothetical protein 238305 10296871 NAL212_0370 Nitrosomonas sp. AL212 hypothetical protein YP_004293479.1 238036 R 153948 CDS YP_004293480.1 325981078 10296872 238369..239088 1 NC_015222.1 KEGG: tps:THAPSDRAFT_268596 hypothetical protein; hypothetical protein 239088 10296872 NAL212_0371 Nitrosomonas sp. AL212 hypothetical protein YP_004293480.1 238369 D 153948 CDS YP_004293481.1 325981079 10296873 239270..239464 1 NC_015222.1 KEGG: gbm:Gbem_3496 hypothetical protein; hypothetical protein 239464 10296873 NAL212_0372 Nitrosomonas sp. AL212 hypothetical protein YP_004293481.1 239270 D 153948 CDS YP_004293482.1 325981080 10296874 239472..241160 1 NC_015222.1 PFAM: Replication endonuclease, probable, phage; KEGG: mfa:Mfla_0975 bacteriophage replication gene A; replication protein A 241160 10296874 NAL212_0373 Nitrosomonas sp. AL212 replication protein A YP_004293482.1 239472 D 153948 CDS YP_004293483.1 325981081 10296875 241534..241974 1 NC_015222.1 KEGG: ctt:CtCNB1_2438 putative chemotaxis protein MotB; putative chemotaxis protein MotB 241974 10296875 NAL212_0374 Nitrosomonas sp. AL212 putative chemotaxis protein MotB YP_004293483.1 241534 D 153948 CDS YP_004293484.1 325981082 10296876 242108..242386 1 NC_015222.1 KEGG: hoh:Hoch_6105 hypothetical protein; hypothetical protein 242386 10296876 NAL212_0375 Nitrosomonas sp. AL212 hypothetical protein YP_004293484.1 242108 D 153948 CDS YP_004293485.1 325981083 10296877 242505..243734 1 NC_015222.1 PFAM: Transposase, mutator type; KEGG: xcv:XCVc0009 transposase mutator family protein; transposase mutator type 243734 10296877 NAL212_0376 Nitrosomonas sp. AL212 transposase mutator type YP_004293485.1 242505 D 153948 CDS YP_004293486.1 325981084 10296878 243767..243862 1 NC_015222.1 hypothetical protein 243862 10296878 NAL212_0377 Nitrosomonas sp. AL212 hypothetical protein YP_004293486.1 243767 D 153948 CDS YP_004293487.1 325981085 10296879 243863..244279 1 NC_015222.1 KEGG: shn:Shewana3_2956 hypothetical protein; hypothetical protein 244279 10296879 NAL212_0378 Nitrosomonas sp. AL212 hypothetical protein YP_004293487.1 243863 D 153948 CDS YP_004293488.1 325981086 10296880 244430..244726 1 NC_015222.1 KEGG: sli:Slin_4371 cell surface receptor IPT/TIG domain protein; hypothetical protein 244726 10296880 NAL212_0379 Nitrosomonas sp. AL212 hypothetical protein YP_004293488.1 244430 D 153948 CDS YP_004293489.1 325981087 10296883 245442..245894 1 NC_015222.1 TIGRFAM: Dehydroquinase, class II; KEGG: nmu:Nmul_A2754 3-dehydroquinate dehydratase; PFAM: Dehydroquinase, class II; 3-dehydroquinate dehydratase 245894 10296883 NAL212_0381 Nitrosomonas sp. AL212 3-dehydroquinate dehydratase YP_004293489.1 245442 D 153948 CDS YP_004293490.1 325981088 10296884 245960..246442 1 NC_015222.1 KEGG: nmu:Nmul_A2753 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin/lipoyl attachment; acetyl-CoA carboxylase, biotin carboxyl carrier protein 246442 10296884 NAL212_0382 Nitrosomonas sp. AL212 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_004293490.1 245960 D 153948 CDS YP_004293491.1 325981089 10296885 246468..247829 1 NC_015222.1 SMART: Biotin carboxylase, C-terminal; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; KEGG: neu:NE0653 biotin carboxylase protein; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase, large subunit, N-terminal; acetyl-CoA carboxylase, biotin carboxylase 247829 10296885 NAL212_0383 Nitrosomonas sp. AL212 acetyl-CoA carboxylase, biotin carboxylase YP_004293491.1 246468 D 153948 CDS YP_004293492.1 325981090 10296886 247865..248782 1 NC_015222.1 KEGG: nmu:Nmul_A2751 ribosomal protein L11 methyltransferase; TIGRFAM: Ribosomal protein L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase, PrmA; 50S ribosomal protein L11 methyltransferase 248782 10296886 NAL212_0384 Nitrosomonas sp. AL212 50S ribosomal protein L11 methyltransferase YP_004293492.1 247865 D 153948 CDS YP_004293493.1 325981091 10296887 248872..249699 1 NC_015222.1 KEGG: net:Neut_1897 zinc finger-domain-containing protein; TIGRFAM: Zinc finger/thioredoxin putative; PFAM: Protein of unknown function DUF3426; hypothetical protein 249699 10296887 NAL212_0385 Nitrosomonas sp. AL212 hypothetical protein YP_004293493.1 248872 D 153948 CDS YP_004293494.1 325981092 10296888 complement(250185..251957) 1 NC_015222.1 TIGRFAM: ATPase, anion-transporting; KEGG: psa:PST_0237 arsenical pump-driving ATPase; SMART: ATPase, AAA+ type, core; arsenite-activated ATPase ArsA 251957 10296888 NAL212_0386 Nitrosomonas sp. AL212 arsenite-activated ATPase ArsA YP_004293494.1 250185 R 153948 CDS YP_004293495.1 325981093 10296889 complement(251978..252328) 1 NC_015222.1 PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: psa:PST_0238 arsenic operon regulator; arsenical resistance operon trans-acting repressor arsD 252328 10296889 NAL212_0387 Nitrosomonas sp. AL212 arsenical resistance operon trans-acting repressor arsD YP_004293495.1 251978 R 153948 CDS YP_004293496.1 325981094 10296890 complement(252427..253713) 1 NC_015222.1 KEGG: mfa:Mfla_1489 arsenical pump membrane protein; TIGRFAM: Arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; arsenical pump membrane protein 253713 10296890 NAL212_0388 Nitrosomonas sp. AL212 arsenical pump membrane protein YP_004293496.1 252427 R 153948 CDS YP_004293497.1 325981095 10296891 complement(253743..254243) 1 NC_015222.1 KEGG: psa:PST_0240 arsenate reductase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase 254243 10296891 NAL212_0389 Nitrosomonas sp. AL212 protein tyrosine phosphatase YP_004293497.1 253743 R 153948 CDS YP_004293498.1 325981096 10296892 complement(254245..254664) 1 NC_015222.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mca:MCA2265 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 254664 10296892 NAL212_0390 Nitrosomonas sp. AL212 glyoxalase/bleomycin resistance protein/dioxygenase YP_004293498.1 254245 R 153948 CDS YP_004293499.1 325981097 10296893 complement(254704..255027) 1 NC_015222.1 KEGG: cvi:CV_2438 transcription regulator protein, arsenical resistance operon repressor; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 255027 10296893 NAL212_0391 Nitrosomonas sp. AL212 regulatory protein ArsR YP_004293499.1 254704 R 153948 CDS YP_004293500.1 325981098 10296894 255309..257432 1 NC_015222.1 PFAM: Protein of unknown function DUF839; KEGG: nmu:Nmul_A2572 hypothetical protein; hypothetical protein 257432 10296894 NAL212_0392 Nitrosomonas sp. AL212 hypothetical protein YP_004293500.1 255309 D 153948 CDS YP_004293501.1 325981099 10296895 complement(257547..258539) 1 NC_015222.1 PFAM: Diacylglycerol kinase, catalytic domain; KEGG: kfl:Kfla_0201 diacylglycerol kinase catalytic region; diacylglycerol kinase catalytic subunit 258539 10296895 NAL212_0393 Nitrosomonas sp. AL212 diacylglycerol kinase catalytic subunit YP_004293501.1 257547 R 153948 CDS YP_004293502.1 325981100 10296896 complement(258569..259612) 1 NC_015222.1 TIGRFAM: Conserved hypothetical protein CHP00661; KEGG: mca:MCA2984 hypothetical protein; hypothetical protein 259612 10296896 NAL212_0394 Nitrosomonas sp. AL212 hypothetical protein YP_004293502.1 258569 R 153948 CDS YP_004293503.1 325981101 10296897 complement(259813..260739) 1 NC_015222.1 PFAM: Patatin/Phospholipase A2-related; KEGG: svo:SVI_2442 patatin-like phospholipase family; patatin 260739 10296897 NAL212_0395 Nitrosomonas sp. AL212 patatin YP_004293503.1 259813 R 153948 CDS YP_004293504.1 325981102 10296898 complement(260746..261555) 1 NC_015222.1 PFAM: Metallo-dependent phosphatase; KEGG: azl:AZL_006380 metallophosphoesterase; metallophosphoesterase 261555 10296898 NAL212_0396 Nitrosomonas sp. AL212 metallophosphoesterase YP_004293504.1 260746 R 153948 CDS YP_004293505.1 325981103 10296900 262790..263545 1 NC_015222.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: mpt:Mpe_A0052 hydrolase or acyltransferase-like protein; alpha/beta hydrolase fold protein 263545 10296900 NAL212_0398 Nitrosomonas sp. AL212 alpha/beta hydrolase fold protein YP_004293505.1 262790 D 153948 CDS YP_004293506.1 325981104 10296901 263888..264451 1 NC_015222.1 PFAM: Lipase, GDSL; KEGG: hau:Haur_2604 GDSL family lipase; G-D-S-L family lipolytic protein 264451 10296901 NAL212_0399 Nitrosomonas sp. AL212 G-D-S-L family lipolytic protein YP_004293506.1 263888 D 153948 CDS YP_004293507.1 325981105 10296902 264448..265506 1 NC_015222.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: hau:Haur_2603 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 265506 10296902 NAL212_0400 Nitrosomonas sp. AL212 UDP-N-acetylglucosamine 2-epimerase YP_004293507.1 264448 D 153948 CDS YP_004293508.1 325981106 10296903 complement(265666..267510) 1 NC_015222.1 PFAM: Heparinase II/III-like; KEGG: nde:NIDE2386 hypothetical protein; heparinase II/III family protein 267510 10296903 NAL212_0401 Nitrosomonas sp. AL212 heparinase II/III family protein YP_004293508.1 265666 R 153948 CDS YP_004293509.1 325981107 10296904 complement(267572..268762) 1 NC_015222.1 KEGG: scl:sce6682 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; Radical SAM domain-containing protein 268762 10296904 NAL212_0402 Nitrosomonas sp. AL212 Radical SAM domain-containing protein YP_004293509.1 267572 R 153948 CDS YP_004293510.1 325981108 10296905 269000..269974 1 NC_015222.1 KEGG: rca:Rcas_3215 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase 269974 10296905 NAL212_0403 Nitrosomonas sp. AL212 Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase YP_004293510.1 269000 D 153948 CDS YP_004293511.1 325981109 10296906 270120..271877 1 NC_015222.1 KEGG: tcx:Tcr_2021 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 271877 10296906 NAL212_0404 Nitrosomonas sp. AL212 phospholipid/glycerol acyltransferase YP_004293511.1 270120 D 153948 CDS YP_004293512.1 325981110 10296907 complement(272024..273022) 1 NC_015222.1 KEGG: nmu:Nmul_A0507 thiosulphate-binding protein; TIGRFAM: Thiosulphate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; sulfate ABC transporter periplasmic sulfate-binding protein 273022 10296907 NAL212_0405 Nitrosomonas sp. AL212 sulfate ABC transporter periplasmic sulfate-binding protein YP_004293512.1 272024 R 153948 CDS YP_004293513.1 325981111 10296908 complement(273586..273711) 1 NC_015222.1 KEGG: nmu:Nmul_A1142 hypothetical protein; hypothetical protein 273711 10296908 NAL212_0406 Nitrosomonas sp. AL212 hypothetical protein YP_004293513.1 273586 R 153948 CDS YP_004293514.1 325981112 10296909 complement(273978..274874) 1 NC_015222.1 TIGRFAM: Ribosomal protein L3-specific, glutamine-N5-methyltransferase; Modification methylase HemK; KEGG: nmu:Nmul_A1854 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; PFAM: Methyltransferase small; protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific 274874 10296909 NAL212_0407 Nitrosomonas sp. AL212 protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific YP_004293514.1 273978 R 153948 CDS YP_004293515.1 325981113 10296910 275035..275493 1 NC_015222.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: nmu:Nmul_A1225 cytidine/deoxycytidylate deaminase, zinc-binding region; CMP/dCMP deaminase zinc-binding protein 275493 10296910 NAL212_0408 Nitrosomonas sp. AL212 CMP/dCMP deaminase zinc-binding protein YP_004293515.1 275035 D 153948 CDS YP_004293516.1 325981114 10296911 275483..275962 1 NC_015222.1 PFAM: YkuD domain; KEGG: nmu:Nmul_A1226 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 275962 10296911 NAL212_0409 Nitrosomonas sp. AL212 ErfK/YbiS/YcfS/YnhG family protein YP_004293516.1 275483 D 153948 CDS YP_004293517.1 325981115 10296912 276021..277682 1 NC_015222.1 KEGG: neu:NE2076 LysM motif-containing protein; PFAM: FecR protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; FecR protein 277682 10296912 NAL212_0410 Nitrosomonas sp. AL212 FecR protein YP_004293517.1 276021 D 153948 CDS YP_004293518.1 325981116 10296913 277679..280555 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; CHASE2; PAS fold; Diguanylate cyclase, predicted; KEGG: neu:NE2075 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase 280555 10296913 NAL212_0411 Nitrosomonas sp. AL212 PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase YP_004293518.1 277679 D 153948 CDS YP_004293519.1 325981117 10296914 280732..282243 1 NC_015222.1 KEGG: nmu:Nmul_A0437 threonine dehydratase; TIGRFAM: Threonine dehydratase I; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal; threonine dehydratase, biosynthetic 282243 10296914 NAL212_0412 Nitrosomonas sp. AL212 threonine dehydratase, biosynthetic YP_004293519.1 280732 D 153948 CDS YP_004293520.1 325981118 10296915 282555..284660 1 NC_015222.1 KEGG: net:Neut_1161 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; methyl-accepting chemotaxis sensory transducer 284660 10296915 NAL212_0413 Nitrosomonas sp. AL212 methyl-accepting chemotaxis sensory transducer YP_004293520.1 282555 D 153948 CDS YP_004293521.1 325981119 10296916 284701..289251 1 NC_015222.1 KEGG: net:Neut_1162 CheA signal transduction histidine kinases; PFAM: Signal transduction response regulator, receiver domain; CheW-like protein; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; ATPase-like, ATP-binding domain; CheW-like protein; CheA signal transduction histidine kinase 289251 10296916 NAL212_0414 Nitrosomonas sp. AL212 CheA signal transduction histidine kinase YP_004293521.1 284701 D 153948 CDS YP_004293522.1 325981120 10296917 complement(289492..289770) 1 NC_015222.1 KEGG: cro:ROD_02701 hypothetical protein; hypothetical protein 289770 10296917 NAL212_0415 Nitrosomonas sp. AL212 hypothetical protein YP_004293522.1 289492 R 153948 CDS YP_004293523.1 325981121 10296918 complement(289915..290310) 1 NC_015222.1 TIGRFAM: Dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; KEGG: nmu:Nmul_A2063 dihydroneopterin aldolase; SMART: Dihydroneopterin aldolase; dihydroneopterin aldolase 290310 10296918 NAL212_0416 Nitrosomonas sp. AL212 dihydroneopterin aldolase YP_004293523.1 289915 R 153948 CDS YP_004293524.1 325981122 10296919 290419..291033 1 NC_015222.1 KEGG: nmu:Nmul_A2062 hypothetical protein; TIGRFAM: Glycerol-3-phosphate acyltransferase, bacteria; PFAM: Glycerol-3-phosphate acyltransferase, bacteria; hypothetical protein 291033 10296919 NAL212_0417 Nitrosomonas sp. AL212 hypothetical protein YP_004293524.1 290419 D 153948 CDS YP_004293525.1 325981123 10296920 complement(291177..292211) 1 NC_015222.1 TIGRFAM: Peptidase M22, glycoprotease, subgroup; Peptidase M22, O-sialoglycoprotein peptidase; KEGG: nmu:Nmul_A2061 putative DNA-binding/iron metalloprotein/AP endonuclease; PFAM: Peptidase M22, glycoprotease; glycoprotease family metalloendopeptidase 292211 10296920 NAL212_0418 Nitrosomonas sp. AL212 glycoprotease family metalloendopeptidase YP_004293525.1 291177 R 153948 CDS YP_004293526.1 325981124 10296921 complement(292192..292338) 1 NC_015222.1 hypothetical protein 292338 10296921 NAL212_0419 Nitrosomonas sp. AL212 hypothetical protein YP_004293526.1 292192 R 153948 CDS YP_004293527.1 325981125 10296922 292612..293568 1 NC_015222.1 KEGG: neu:NE1809 beta subunit of citrate lyase; PFAM: Aldehyde-lyase domain; citryl-CoA lyase 293568 10296922 NAL212_0420 Nitrosomonas sp. AL212 citryl-CoA lyase YP_004293527.1 292612 D 153948 CDS YP_004293528.1 325981126 10296923 293668..294849 1 NC_015222.1 PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; TIGRFAM: Succinyl-CoA synthetase, beta subunit; HAMAP: Succinyl-CoA synthetase, beta subunit; KEGG: neu:NE1810 malate--CoA ligase subunit beta; succinyl-CoA ligase [ADP-forming] subunit beta 294849 10296923 NAL212_0421 Nitrosomonas sp. AL212 succinyl-CoA ligase [ADP-forming] subunit beta YP_004293528.1 293668 D 153948 CDS YP_004293529.1 325981127 10296924 294859..295746 1 NC_015222.1 SMART: CoA-binding; TIGRFAM: Succinyl-CoA ligase, alpha subunit; KEGG: neu:NE1811 succinyl-CoA synthetase subunit alpha; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit alpha 295746 10296924 NAL212_0422 Nitrosomonas sp. AL212 succinyl-CoA synthetase subunit alpha YP_004293529.1 294859 D 153948 CDS YP_004293530.1 325981128 10296925 complement(295844..296371) 1 NC_015222.1 PFAM: Haemerythrin/HHE cation-binding motif; KEGG: mei:Msip34_2571 hemerythrin HHE cation binding domain protein; hemerythrin HHE cation binding domain-containing protein 296371 10296925 NAL212_0423 Nitrosomonas sp. AL212 hemerythrin HHE cation binding domain-containing protein YP_004293530.1 295844 R 153948 CDS YP_004293531.1 325981129 10296926 296762..297292 1 NC_015222.1 PFAM: Transposase IS200-like; KEGG: pca:Pcar_1473 transposase, putative; transposase IS200-family protein 297292 10296926 NAL212_0424 Nitrosomonas sp. AL212 transposase IS200-family protein YP_004293531.1 296762 D 153948 CDS YP_004293532.1 325981130 10296927 297438..298058 1 NC_015222.1 KEGG: net:Neut_1503 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0114, bacteria; PFAM: Uncharacterised protein family UPF0114; hypothetical protein 298058 10296927 NAL212_0425 Nitrosomonas sp. AL212 hypothetical protein YP_004293532.1 297438 D 153948 CDS YP_004293533.1 325981131 10296928 298445..301567 1 NC_015222.1 KEGG: rsh:Rsph17029_4185 Na-Ca exchanger/integrin-beta4; PFAM: Na-Ca exchanger/integrin-beta4; Haemolysin-type calcium-binding repeat; SMART: Na-Ca exchanger/integrin-beta4; Na-Ca exchanger/integrin-beta4 301567 10296928 NAL212_0426 Nitrosomonas sp. AL212 Na-Ca exchanger/integrin-beta4 YP_004293533.1 298445 D 153948 CDS YP_004293534.1 325981132 10296929 complement(301665..302195) 1 NC_015222.1 KEGG: nmu:Nmul_A0015 CinA-like; TIGRFAM: CinA, C-terminal; PFAM: CinA, C-terminal; CinA domain-containing protein 302195 10296929 NAL212_0427 Nitrosomonas sp. AL212 CinA domain-containing protein YP_004293534.1 301665 R 153948 CDS YP_004293535.1 325981133 10296930 complement(302230..303057) 1 NC_015222.1 KEGG: nmu:Nmul_A2092 hypothetical protein; hypothetical protein 303057 10296930 NAL212_0428 Nitrosomonas sp. AL212 hypothetical protein YP_004293535.1 302230 R 153948 CDS YP_004293536.1 325981134 10296931 complement(303069..303584) 1 NC_015222.1 PFAM: Protein of unknown function DUF2141; KEGG: hne:HNE_1585 hypothetical protein; hypothetical protein 303584 10296931 NAL212_0429 Nitrosomonas sp. AL212 hypothetical protein YP_004293536.1 303069 R 153948 CDS YP_004293537.1 325981135 10296932 303698..306016 1 NC_015222.1 PFAM: DNA methylase, adenine-specific; N6 adenine-specific DNA methyltransferase, N12 class, N-terminal; KEGG: slt:Slit_2437 N-6 DNA methylase; N-6 DNA methylase 306016 10296932 NAL212_0430 Nitrosomonas sp. AL212 N-6 DNA methylase YP_004293537.1 303698 D 153948 CDS YP_004293538.1 325981136 10296933 306060..307346 1 NC_015222.1 PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: ava:Ava_3499 restriction modification system DNA specificity subunit; restriction modification system DNA specificity domain 307346 10296933 NAL212_0431 Nitrosomonas sp. AL212 restriction modification system DNA specificity domain YP_004293538.1 306060 D 153948 CDS YP_004293539.1 325981137 10296934 complement(307504..307926) 1 NC_015222.1 PFAM: PilT protein, N-terminal; KEGG: bts:Btus_3192 PilT protein domain protein; PilT protein domain-containing protein 307926 10296934 NAL212_0432 Nitrosomonas sp. AL212 PilT protein domain-containing protein YP_004293539.1 307504 R 153948 CDS YP_004293540.1 325981138 10296935 complement(307923..308174) 1 NC_015222.1 KEGG: gur:Gura_0714 prevent-host-death family protein; TIGRFAM: Prevent-host-death protein; PFAM: Prevent-host-death protein; prevent-host-death family protein 308174 10296935 NAL212_0433 Nitrosomonas sp. AL212 prevent-host-death family protein YP_004293540.1 307923 R 153948 CDS YP_004293541.1 325981139 10296936 308340..308543 1 NC_015222.1 hypothetical protein 308543 10296936 NAL212_0434 Nitrosomonas sp. AL212 hypothetical protein YP_004293541.1 308340 D 153948 CDS YP_004293542.1 325981140 10296937 308578..308910 1 NC_015222.1 KEGG: cag:Cagg_2602 excinuclease ABC C subunit domain protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal; excinuclease ABC subunit C 308910 10296937 NAL212_0435 Nitrosomonas sp. AL212 excinuclease ABC subunit C YP_004293542.1 308578 D 153948 CDS YP_004293543.1 325981141 10296938 309194..312433 1 NC_015222.1 TIGRFAM: Restriction endonuclease, type I, EcoRI, R subunit; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Protein of unknown function DUF3387; KEGG: slt:Slit_2435 type I site-specific deoxyribonuclease, HsdR family; SMART: DEAD-like helicase, N-terminal; HsdR family type I site-specific deoxyribonuclease 312433 10296938 NAL212_0436 Nitrosomonas sp. AL212 HsdR family type I site-specific deoxyribonuclease YP_004293543.1 309194 D 153948 CDS YP_004293544.1 325981142 10296939 complement(312488..312874) 1 NC_015222.1 KEGG: net:Neut_2249 hypothetical protein; hypothetical protein 312874 10296939 NAL212_0437 Nitrosomonas sp. AL212 hypothetical protein YP_004293544.1 312488 R 153948 CDS YP_004293545.1 325981143 10296940 313411..317121 1 NC_015222.1 TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; KEGG: nmu:Nmul_A0045 B12-dependent methionine synthase; PFAM: Homocysteine S-methyltransferase; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12-dependent methionine synthase, activation domain; Pterin-binding; methionine synthase 317121 10296940 NAL212_0438 Nitrosomonas sp. AL212 methionine synthase YP_004293545.1 313411 D 153948 CDS YP_004293546.1 325981144 10296941 317337..317522 1 NC_015222.1 KEGG: nmu:Nmul_A0029 hypothetical protein; hypothetical protein 317522 10296941 NAL212_0439 Nitrosomonas sp. AL212 hypothetical protein YP_004293546.1 317337 D 153948 CDS YP_004293547.1 325981145 10296942 complement(317634..318389) 1 NC_015222.1 KEGG: neu:NE0599 hypothetical protein; HAMAP: Uncharacterised protein family UPF0289; PFAM: Uncharacterised protein family UPF0289; hypothetical protein 318389 10296942 NAL212_0440 Nitrosomonas sp. AL212 hypothetical protein YP_004293547.1 317634 R 153948 CDS YP_004293548.1 325981146 10296943 complement(318511..319107) 1 NC_015222.1 TIGRFAM: Dephospho-CoA kinase; KEGG: neu:NE0598 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 319107 10296943 NAL212_0441 Nitrosomonas sp. AL212 dephospho-CoA kinase YP_004293548.1 318511 R 153948 CDS YP_004293549.1 325981147 10296944 complement(319111..319974) 1 NC_015222.1 KEGG: net:Neut_1044 prepilin peptidase; PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV; prepilin peptidase 319974 10296944 NAL212_0442 Nitrosomonas sp. AL212 prepilin peptidase YP_004293549.1 319111 R 153948 CDS YP_004293550.1 325981148 10296945 complement(320007..321230) 1 NC_015222.1 PFAM: Type II secretion system F domain; KEGG: neu:NE0596 type II secretion system protein; Type II secretion system F domain 321230 10296945 NAL212_0443 Nitrosomonas sp. AL212 Type II secretion system F domain YP_004293550.1 320007 R 153948 CDS YP_004293551.1 325981149 10296946 complement(321428..322324) 1 NC_015222.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: nmu:Nmul_A2685 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 322324 10296946 NAL212_0444 Nitrosomonas sp. AL212 NAD-dependent epimerase/dehydratase YP_004293551.1 321428 R 153948 CDS YP_004293552.1 325981150 10296947 322372..323424 1 NC_015222.1 KEGG: nmu:Nmul_A2686 CDP-6-deoxy-delta-3,4-glucoseen reductase; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase, FAD-binding domain; Ferredoxin; ferredoxin--NAD(+) reductase 323424 10296947 NAL212_0445 Nitrosomonas sp. AL212 ferredoxin--NAD(+) reductase YP_004293552.1 322372 D 153948 CDS YP_004293553.1 325981151 10296948 complement(323554..324729) 1 NC_015222.1 PFAM: HemY, N-terminal; KEGG: net:Neut_1040 HemY domain-containing protein; HemY domain-containing protein 324729 10296948 NAL212_0446 Nitrosomonas sp. AL212 HemY domain-containing protein YP_004293553.1 323554 R 153948 CDS YP_004293554.1 325981152 10296949 complement(324876..325661) 1 NC_015222.1 PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; KEGG: nmu:Nmul_A2689 uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 325661 10296949 NAL212_0447 Nitrosomonas sp. AL212 uroporphyrinogen III synthase HEM4 YP_004293554.1 324876 R 153948 CDS YP_004293555.1 325981153 10296950 complement(325664..326620) 1 NC_015222.1 KEGG: nmu:Nmul_A2690 porphobilinogen deaminase; TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; PFAM: Porphobilinogen deaminase, N-terminal; Porphobilinogen deaminase, C-terminal domain; porphobilinogen deaminase 326620 10296950 NAL212_0448 Nitrosomonas sp. AL212 porphobilinogen deaminase YP_004293555.1 325664 R 153948 CDS YP_004293556.1 325981154 10296951 326745..329546 1 NC_015222.1 KEGG: neu:NE0589 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 329546 10296951 NAL212_0449 Nitrosomonas sp. AL212 phosphoenolpyruvate carboxylase YP_004293556.1 326745 D 153948 CDS YP_004293557.1 325981155 10296952 329606..330910 1 NC_015222.1 PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: nmu:Nmul_A2736 peptidase M16-like; peptidase M16 domain-containing protein 330910 10296952 NAL212_0450 Nitrosomonas sp. AL212 peptidase M16 domain-containing protein YP_004293557.1 329606 D 153948 CDS YP_004293558.1 325981156 10296953 330923..331477 1 NC_015222.1 TIGRFAM: RNA methyltransferase, RsmD; KEGG: nmu:Nmul_A2735 hypothetical protein; PFAM: RNA methyltransferase, RsmD; methyltransferase 331477 10296953 NAL212_0451 Nitrosomonas sp. AL212 methyltransferase YP_004293558.1 330923 D 153948 CDS YP_004293559.1 325981157 10296954 331470..331949 1 NC_015222.1 TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; KEGG: nmu:Nmul_A2734 phosphopantetheine adenylyltransferase; PFAM: Cytidylyltransferase; pantetheine-phosphate adenylyltransferase 331949 10296954 NAL212_0452 Nitrosomonas sp. AL212 pantetheine-phosphate adenylyltransferase YP_004293559.1 331470 D 153948 CDS YP_004293560.1 325981158 10296955 331964..332224 1 NC_015222.1 KEGG: tgr:Tgr7_0299 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 332224 10296955 NAL212_0453 Nitrosomonas sp. AL212 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_004293560.1 331964 D 153948 CDS YP_004293561.1 325981159 10296956 332449..333291 1 NC_015222.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: app:CAP2UW1_1706 putative signal transduction protein; metal dependent phosphohydrolase 333291 10296956 NAL212_0454 Nitrosomonas sp. AL212 metal dependent phosphohydrolase YP_004293561.1 332449 D 153948 CDS YP_004293562.1 325981160 10296957 333460..334701 1 NC_015222.1 KEGG: net:Neut_2126 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; Metal-dependent hydrolase HDOD; SMART: Diguanylate phosphodiesterase, EAL domain; diguanylate phosphodiesterase metal dependent hydrolase domain 334701 10296957 NAL212_0455 Nitrosomonas sp. AL212 diguanylate phosphodiesterase metal dependent hydrolase domain YP_004293562.1 333460 D 153948 CDS YP_004293563.1 325981161 10296958 complement(334818..337391) 1 NC_015222.1 TIGRFAM: Cyanophycin synthetase; KEGG: app:CAP2UW1_3887 cyanophycin synthetase; PFAM: Mur ligase, central; Mur ligase, C-terminal; Carbamoyl-phosphate synthetase, large subunit, ATP-binding; cyanophycin synthetase 337391 10296958 NAL212_0456 Nitrosomonas sp. AL212 cyanophycin synthetase YP_004293563.1 334818 R 153948 CDS YP_004293564.1 325981162 10296959 complement(337388..339709) 1 NC_015222.1 TIGRFAM: Cyanophycin synthetase; KEGG: nmu:Nmul_A2251 cyanophycin synthetase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Mur ligase, central; cyanophycin synthetase 339709 10296959 NAL212_0457 Nitrosomonas sp. AL212 cyanophycin synthetase YP_004293564.1 337388 R 153948 CDS YP_004293565.1 325981163 10296960 339975..341258 1 NC_015222.1 PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; KEGG: nmu:Nmul_A2132 hypothetical protein; hypothetical protein 341258 10296960 NAL212_0458 Nitrosomonas sp. AL212 hypothetical protein YP_004293565.1 339975 D 153948 CDS YP_004293566.1 325981164 10296962 341790..342710 1 NC_015222.1 PFAM: Carbohydrate/purine kinase; KEGG: mfa:Mfla_2609 PfkB; PfkB domain-containing protein 342710 10296962 NAL212_0459 Nitrosomonas sp. AL212 PfkB domain-containing protein YP_004293566.1 341790 D 153948 CDS YP_004293567.1 325981165 10296963 342713..344872 1 NC_015222.1 TIGRFAM: Sucrose-phosphate synthase, glycosyltransferase domain; Sucrose phosphate synthase, sucrose phosphatase-like domain; HAD-superfamily hydrolase, subfamily IIB; KEGG: mei:Msip34_2763 sucrose-phosphate synthase; PFAM: Sucrose-phosphate synthase; Glycosyl transferase, group 1; Sucrose synthase; sucrose-phosphate synthase 344872 10296963 NAL212_0460 Nitrosomonas sp. AL212 sucrose-phosphate synthase YP_004293567.1 342713 D 153948 CDS YP_004293568.1 325981166 10296964 344894..346846 1 NC_015222.1 KEGG: mei:Msip34_2764 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic domain; amylosucrase 346846 10296964 NAL212_0461 Nitrosomonas sp. AL212 amylosucrase YP_004293568.1 344894 D 153948 CDS YP_004293569.1 325981167 10296965 347112..347711 1 NC_015222.1 TIGRFAM: Lumazine-binding protein; KEGG: nmu:Nmul_A0009 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha 347711 10296965 NAL212_0462 Nitrosomonas sp. AL212 riboflavin synthase subunit alpha YP_004293569.1 347112 D 153948 CDS YP_004293570.1 325981168 10296966 347733..348833 1 NC_015222.1 KEGG: nmu:Nmul_A0010 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA; 3,4-dihydroxy-2-butanone 4-phosphate synthase 348833 10296966 NAL212_0463 Nitrosomonas sp. AL212 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_004293570.1 347733 D 153948 CDS YP_004293571.1 325981169 10296967 348891..349373 1 NC_015222.1 KEGG: neu:NE2557 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 349373 10296967 NAL212_0464 Nitrosomonas sp. AL212 6,7-dimethyl-8-ribityllumazine synthase YP_004293571.1 348891 D 153948 CDS YP_004293572.1 325981170 10296968 349370..349870 1 NC_015222.1 KEGG: nmu:Nmul_A0012 NusB antitermination factor; TIGRFAM: NusB antitermination factor; PFAM: NusB/RsmB/TIM44; NusB antitermination factor 349870 10296968 NAL212_0465 Nitrosomonas sp. AL212 NusB antitermination factor YP_004293572.1 349370 D 153948 CDS YP_004293573.1 325981171 10296969 349880..350851 1 NC_015222.1 TIGRFAM: Thiamine-monophosphate kinase; KEGG: nmu:Nmul_A0013 thiamine-monophosphate kinase; PFAM: AIR synthase-related protein; thiamine-monophosphate kinase 350851 10296969 NAL212_0466 Nitrosomonas sp. AL212 thiamine-monophosphate kinase YP_004293573.1 349880 D 153948 CDS YP_004293574.1 325981172 10296970 350832..351383 1 NC_015222.1 PFAM: Phosphatidylglycerophosphatase A; KEGG: net:Neut_2520 phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 351383 10296970 NAL212_0467 Nitrosomonas sp. AL212 phosphatidylglycerophosphatase A YP_004293574.1 350832 D 153948 CDS YP_004293575.1 325981173 10296971 complement(351425..352900) 1 NC_015222.1 KEGG: kko:Kkor_1927 anion transporter; TIGRFAM: Sodium/sulphate symporter; PFAM: Sodium/sulphate symporter; anion transporter 352900 10296971 NAL212_0468 Nitrosomonas sp. AL212 anion transporter YP_004293575.1 351425 R 153948 CDS YP_004293576.1 325981174 10296972 complement(353143..353562) 1 NC_015222.1 KEGG: nmu:Nmul_A1630 hypothetical protein; hypothetical protein 353562 10296972 NAL212_0469 Nitrosomonas sp. AL212 hypothetical protein YP_004293576.1 353143 R 153948 CDS YP_004293577.1 325981175 10296973 complement(353751..354116) 1 NC_015222.1 PFAM: Protein of unknown function DUF1486; KEGG: vcn:VOLCADRAFT_106361 hypothetical protein; hypothetical protein 354116 10296973 NAL212_0470 Nitrosomonas sp. AL212 hypothetical protein YP_004293577.1 353751 R 153948 CDS YP_004293578.1 325981176 10296974 complement(354159..354941) 1 NC_015222.1 PFAM: Uncharacterised protein family UPF0246; KEGG: maq:Maqu_2499 hypothetical protein; hypothetical protein 354941 10296974 NAL212_0471 Nitrosomonas sp. AL212 hypothetical protein YP_004293578.1 354159 R 153948 CDS YP_004293579.1 325981177 10296975 355536..357041 1 NC_015222.1 KEGG: neu:NE0583 hypothetical protein; hypothetical protein 357041 10296975 NAL212_0472 Nitrosomonas sp. AL212 hypothetical protein YP_004293579.1 355536 D 153948 CDS YP_004293580.1 325981178 10296976 complement(357162..359090) 1 NC_015222.1 KEGG: neu:NE0458 hypothetical protein; hypothetical protein 359090 10296976 NAL212_0473 Nitrosomonas sp. AL212 hypothetical protein YP_004293580.1 357162 R 153948 CDS YP_004293581.1 325981179 10296977 complement(359281..360078) 1 NC_015222.1 KEGG: neu:NE0459 hypothetical protein; TIGRFAM: Flagellar biosynthesis protein FliR; PFAM: Type III secretion system inner membrane R protein; flagellar biosynthetic protein FliR 360078 10296977 NAL212_0474 Nitrosomonas sp. AL212 flagellar biosynthetic protein FliR YP_004293581.1 359281 R 153948 CDS YP_004293582.1 325981180 10296978 complement(360132..360404) 1 NC_015222.1 KEGG: net:Neut_2060 flagellar biosynthetic protein FliQ; TIGRFAM: Flagellar biosynthesis protein FliQ; PFAM: Bacterial export protein FliQ, family 3; flagellar biosynthetic protein FliQ 360404 10296978 NAL212_0475 Nitrosomonas sp. AL212 flagellar biosynthetic protein FliQ YP_004293582.1 360132 R 153948 CDS YP_004293583.1 325981181 10296979 complement(360418..361164) 1 NC_015222.1 KEGG: net:Neut_2059 flagellar biosynthesis protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP 361164 10296979 NAL212_0476 Nitrosomonas sp. AL212 flagellar biosynthetic protein FliP YP_004293583.1 360418 R 153948 CDS YP_004293584.1 325981182 10296980 complement(361262..361699) 1 NC_015222.1 KEGG: net:Neut_2058 flagellar biosynthesis protein, FliO; TIGRFAM: Flagellar biosynthesis protein, FliO; PFAM: Flagellar biosynthesis protein, FliO; flagellar biosynthetic protein FliO 361699 10296980 NAL212_0477 Nitrosomonas sp. AL212 flagellar biosynthetic protein FliO YP_004293584.1 361262 R 153948 CDS YP_004293585.1 325981183 10296981 complement(361710..362252) 1 NC_015222.1 KEGG: meh:M301_1010 flagellar motor switch protein FliN; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA); flagellar motor switch protein FliN 362252 10296981 NAL212_0478 Nitrosomonas sp. AL212 flagellar motor switch protein FliN YP_004293585.1 361710 R 153948 CDS YP_004293586.1 325981184 10296982 complement(362269..363246) 1 NC_015222.1 KEGG: bpy:Bphyt_3777 flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA); flagellar motor switch protein FliM 363246 10296982 NAL212_0479 Nitrosomonas sp. AL212 flagellar motor switch protein FliM YP_004293586.1 362269 R 153948 CDS YP_004293587.1 325981185 10296983 complement(363254..363748) 1 NC_015222.1 PFAM: Flagellar basal body-associated protein FliL; KEGG: neu:NE0465 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 363748 10296983 NAL212_0480 Nitrosomonas sp. AL212 flagellar basal body-associated protein FliL YP_004293587.1 363254 R 153948 CDS YP_004293588.1 325981186 10296984 complement(364086..365270) 1 NC_015222.1 PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: gca:Galf_1064 flagellar hook-length control protein-like, C-terminal domain; flagellar hook-length control protein-like protein 365270 10296984 NAL212_0481 Nitrosomonas sp. AL212 flagellar hook-length control protein-like protein YP_004293588.1 364086 R 153948 CDS YP_004293589.1 325981187 10296985 complement(365351..365809) 1 NC_015222.1 KEGG: neu:NE2087 flagellar FliJ protein; TIGRFAM: Flagellar export FliJ; PFAM: Flagellar export FliJ; flagellar export protein FliJ 365809 10296985 NAL212_0482 Nitrosomonas sp. AL212 flagellar export protein FliJ YP_004293589.1 365351 R 153948 CDS YP_004293590.1 325981188 10296986 complement(365839..367239) 1 NC_015222.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Flagellar export ATPase, FliI, clade 1; ATPase, type III secretion system, FliI/YscN; KEGG: neu:NE2086 flagellar ATP synthase; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; flagellar protein export ATPase FliI 367239 10296986 NAL212_0483 Nitrosomonas sp. AL212 flagellar protein export ATPase FliI YP_004293590.1 365839 R 153948 CDS YP_004293591.1 325981189 10296987 complement(367241..367951) 1 NC_015222.1 PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: neu:NE2085 flagellar assembly protein FliH; flagellar assembly protein fliH/Type III secretion system HrpE 367951 10296987 NAL212_0484 Nitrosomonas sp. AL212 flagellar assembly protein fliH/Type III secretion system HrpE YP_004293591.1 367241 R 153948 CDS YP_004293592.1 325981190 10296988 complement(368030..369025) 1 NC_015222.1 KEGG: net:Neut_0744 flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG, C-terminal; flagellar motor switch protein FliG 369025 10296988 NAL212_0485 Nitrosomonas sp. AL212 flagellar motor switch protein FliG YP_004293592.1 368030 R 153948 CDS YP_004293593.1 325981191 10296989 complement(369018..370733) 1 NC_015222.1 KEGG: net:Neut_0745 flagellar M-ring protein FliF; TIGRFAM: Flagellar FliF M-ring protein; PFAM: Secretory protein YscJ/FliF; Flagellar M-ring C-terminal; flagellar M-ring protein FliF 370733 10296989 NAL212_0486 Nitrosomonas sp. AL212 flagellar M-ring protein FliF YP_004293593.1 369018 R 153948 CDS YP_004293594.1 325981192 10296990 371067..372257 1 NC_015222.1 KEGG: neu:NE2082 putative two-component sensor; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; PAS/PAC sensor signal transduction histidine kinase 372257 10296990 NAL212_0487 Nitrosomonas sp. AL212 PAS/PAC sensor signal transduction histidine kinase YP_004293594.1 371067 D 153948 CDS YP_004293595.1 325981193 10296991 372262..373575 1 NC_015222.1 KEGG: neu:NE2081 sigma-54 dependent response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; two component, sigma54 specific, transcriptional regulator, Fis family 373575 10296991 NAL212_0488 Nitrosomonas sp. AL212 two component, sigma54 specific, transcriptional regulator, Fis family YP_004293595.1 372262 D 153948 CDS YP_004293596.1 325981194 10296992 373676..373999 1 NC_015222.1 KEGG: neu:NE2080 flagellar hook-basal body protein FliE; TIGRFAM: Flagellar hook-basal body complex protein FliE; PFAM: Flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit FliE 373999 10296992 NAL212_0489 Nitrosomonas sp. AL212 flagellar hook-basal body complex subunit FliE YP_004293596.1 373676 D 153948 CDS YP_004293597.1 325981195 10296993 complement(374038..375891) 1 NC_015222.1 KEGG: gca:Galf_2156 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 375891 10296993 NAL212_0490 Nitrosomonas sp. AL212 ABC transporter YP_004293597.1 374038 R 153948 CDS YP_004293598.1 325981196 10296994 complement(376184..376432) 1 NC_015222.1 KEGG: reh:H16_A1991 hypothetical protein; hypothetical protein 376432 10296994 NAL212_0491 Nitrosomonas sp. AL212 hypothetical protein YP_004293598.1 376184 R 153948 CDS YP_004293599.1 325981197 10296995 376823..378439 1 NC_015222.1 KEGG: amr:AM1_6172 IS5 family transposase; IS5 family transposase 378439 10296995 NAL212_0492 Nitrosomonas sp. AL212 IS5 family transposase YP_004293599.1 376823 D 153948 CDS YP_004293600.1 325981198 10296996 complement(378743..380050) 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase; transposase IS4 family protein 380050 10296996 NAL212_0493 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004293600.1 378743 R 153948 CDS YP_004293601.1 325981199 10296997 complement(380379..380894) 1 NC_015222.1 KEGG: der:Dere_GG10426 GG10426 gene product from transcript GG10426-RA; hypothetical protein 380894 10296997 NAL212_0494 Nitrosomonas sp. AL212 hypothetical protein YP_004293601.1 380379 R 153948 CDS YP_004293602.1 325981200 10296998 complement(381249..382004) 1 NC_015222.1 PFAM: Spermine synthase; KEGG: slt:Slit_2028 spermine synthase; spermine synthase 382004 10296998 NAL212_0495 Nitrosomonas sp. AL212 spermine synthase YP_004293602.1 381249 R 153948 CDS YP_004293603.1 325981201 10296999 complement(382021..383292) 1 NC_015222.1 PFAM: MgtC/SapB transporter; KEGG: neu:NE0009 MgtC family membrane protein; MgtC/SapB transporter 383292 10296999 NAL212_0496 Nitrosomonas sp. AL212 MgtC/SapB transporter YP_004293603.1 382021 R 153948 CDS YP_004293604.1 325981202 10297000 complement(383282..385054) 1 NC_015222.1 KEGG: net:Neut_0131 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: Bacterial RecJ exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; single-stranded-DNA-specific exonuclease RecJ 385054 10297000 NAL212_0497 Nitrosomonas sp. AL212 single-stranded-DNA-specific exonuclease RecJ YP_004293604.1 383282 R 153948 CDS YP_004293605.1 325981203 10297001 complement(385096..385944) 1 NC_015222.1 PFAM: Transporter-associated domain; Cystathionine beta-synthase, core; KEGG: net:Neut_1786 CBS domain-containing protein; transporter-associated protein 385944 10297001 NAL212_0498 Nitrosomonas sp. AL212 transporter-associated protein YP_004293605.1 385096 R 153948 CDS YP_004293606.1 325981204 10297002 complement(386034..386540) 1 NC_015222.1 manually curated; TIGRFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; KEGG: neu:NE2333 hypothetical protein; PFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; hypothetical protein 386540 10297002 NAL212_0499 Nitrosomonas sp. AL212 hypothetical protein YP_004293606.1 386034 R 153948 CDS YP_004293607.1 325981205 10297003 complement(386506..387561) 1 NC_015222.1 PFAM: PhoH-like protein; KEGG: nmu:Nmul_A2696 PhoH-like protein; phoH family protein 387561 10297003 NAL212_0500 Nitrosomonas sp. AL212 phoH family protein YP_004293607.1 386506 R 153948 CDS YP_004293608.1 325981206 10297004 complement(387589..388917) 1 NC_015222.1 KEGG: nmu:Nmul_A2692 (dimethylallyl)adenosine tRNA methylthiotransferase; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; manually curated; TIGRFAM: tRNA-i(6)A37 modification enzyme MiaB; Methylthiotransferase; SMART: Elongator protein 3/MiaB/NifB; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; (dimethylallyl)adenosine tRNA methylthiotransferase MiaB 388917 10297004 NAL212_0501 Nitrosomonas sp. AL212 (dimethylallyl)adenosine tRNA methylthiotransferase MiaB YP_004293608.1 387589 R 153948 CDS YP_004293609.1 325981207 10297005 complement(388954..389244) 1 NC_015222.1 KEGG: rfr:Rfer_3366 hypothetical protein; hypothetical protein 389244 10297005 NAL212_0502 Nitrosomonas sp. AL212 hypothetical protein YP_004293609.1 388954 R 153948 CDS YP_004293610.1 325981208 10297006 389812..390993 1 NC_015222.1 TIGRFAM: Thiolase; KEGG: neu:NE2262 beta-ketothiolase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase 390993 10297006 NAL212_0503 Nitrosomonas sp. AL212 acetyl-CoA acetyltransferase YP_004293610.1 389812 D 153948 CDS YP_004293611.1 325981209 10297007 391145..391528 1 NC_015222.1 PFAM: ATPase, F0 complex, subunit I; KEGG: nmu:Nmul_A0303 ATP synthase protein I; ATP synthase I chain 391528 10297007 NAL212_0504 Nitrosomonas sp. AL212 ATP synthase I chain YP_004293611.1 391145 D 153948 CDS YP_004293612.1 325981210 10297008 391552..392361 1 NC_015222.1 KEGG: net:Neut_0271 F0F1 ATP synthase subunit A; TIGRFAM: ATPase, F0 complex, subunit A; PFAM: ATPase, F0 complex, subunit A; ATP synthase F0 subunit A 392361 10297008 NAL212_0505 Nitrosomonas sp. AL212 ATP synthase F0 subunit A YP_004293612.1 391552 D 153948 CDS YP_004293613.1 325981211 10297009 392410..392682 1 NC_015222.1 KEGG: neu:NE0201 F0F1 ATP synthase subunit C; TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; PFAM: ATPase, F0/V0 complex, subunit C; ATP synthase F0 subunit C 392682 10297009 NAL212_0506 Nitrosomonas sp. AL212 ATP synthase F0 subunit C YP_004293613.1 392410 D 153948 CDS YP_004293614.1 325981212 10297010 392723..393196 1 NC_015222.1 KEGG: net:Neut_0273 F0F1 ATP synthase subunit B; TIGRFAM: ATPase, F0 complex, subunit B, bacterial; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; ATP synthase F0 subunit B 393196 10297010 NAL212_0507 Nitrosomonas sp. AL212 ATP synthase F0 subunit B YP_004293614.1 392723 D 153948 CDS YP_004293615.1 325981213 10297011 393196..393732 1 NC_015222.1 KEGG: nmu:Nmul_A0307 ATP synthase F1, delta subunit; TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; PFAM: ATPase, F1 complex, OSCP/delta subunit; ATP synthase F1 subunit delta 393732 10297011 NAL212_0508 Nitrosomonas sp. AL212 ATP synthase F1 subunit delta YP_004293615.1 393196 D 153948 CDS YP_004293616.1 325981214 10297012 393745..395286 1 NC_015222.1 KEGG: nmu:Nmul_A0308 F0F1 ATP synthase subunit alpha; TIGRFAM: ATPase, F1 complex, alpha subunit; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATP synthase F1 subunit alpha 395286 10297012 NAL212_0509 Nitrosomonas sp. AL212 ATP synthase F1 subunit alpha YP_004293616.1 393745 D 153948 CDS YP_004293617.1 325981215 10297013 395291..396175 1 NC_015222.1 KEGG: net:Neut_0276 F0F1 ATP synthase subunit gamma; TIGRFAM: ATPase, F1 complex, gamma subunit; PFAM: ATPase, F1 complex, gamma subunit; ATP synthase F1 subunit gamma 396175 10297013 NAL212_0510 Nitrosomonas sp. AL212 ATP synthase F1 subunit gamma YP_004293617.1 395291 D 153948 CDS YP_004293618.1 325981216 10297014 396204..397583 1 NC_015222.1 TIGRFAM: ATPase, F1 complex, beta subunit; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; KEGG: nmu:Nmul_A0310 F0F1 ATP synthase subunit beta; SMART: ATPase, AAA+ type, core; ATP synthase F1 subunit beta 397583 10297014 NAL212_0511 Nitrosomonas sp. AL212 ATP synthase F1 subunit beta YP_004293618.1 396204 D 153948 CDS YP_004293619.1 325981217 10297015 397601..398023 1 NC_015222.1 KEGG: neu:NE0207 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; ATPase, F1 complex, delta/epsilon subunit, C-terminal; ATP synthase F1 subunit epsilon 398023 10297015 NAL212_0512 Nitrosomonas sp. AL212 ATP synthase F1 subunit epsilon YP_004293619.1 397601 D 153948 CDS YP_004293620.1 325981218 10297016 398280..399653 1 NC_015222.1 KEGG: nmu:Nmul_A0312 UDP-N-acetylglucosamine pyrophosphorylase; manually curated; TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Bacterial transferase hexapeptide repeat; HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; bifunctional protein glmU 399653 10297016 NAL212_0513 Nitrosomonas sp. AL212 bifunctional protein glmU YP_004293620.1 398280 D 153948 CDS YP_004293621.1 325981219 10297017 399716..401572 1 NC_015222.1 TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; KEGG: nmu:Nmul_A0313 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: Sugar isomerase (SIS); Glutamine amidotransferase, class-II; glucosamine/fructose-6-phosphate aminotransferase 401572 10297017 NAL212_0514 Nitrosomonas sp. AL212 glucosamine/fructose-6-phosphate aminotransferase YP_004293621.1 399716 D 153948 CDS YP_004293622.1 325981220 10297018 401731..402456 1 NC_015222.1 KEGG: nmu:Nmul_A2722 hypothetical protein; TIGRFAM: Protein of unknown function DUF28; PFAM: Protein of unknown function DUF28; hypothetical protein 402456 10297018 NAL212_0515 Nitrosomonas sp. AL212 hypothetical protein YP_004293622.1 401731 D 153948 CDS YP_004293623.1 325981221 10297019 402484..403002 1 NC_015222.1 KEGG: slt:Slit_0512 crossover junction endodeoxyribonuclease RuvC; manually curated; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; HAMAP: Crossover junction endodeoxyribonuclease RuvC; Crossover junction endodeoxyribonuclease ruvC 403002 10297019 NAL212_0516 Nitrosomonas sp. AL212 Crossover junction endodeoxyribonuclease ruvC YP_004293623.1 402484 D 153948 CDS YP_004293624.1 325981222 10297020 402999..403580 1 NC_015222.1 TIGRFAM: Bacterial DNA recombination protein RuvA; HAMAP: Bacterial DNA recombination protein RuvA; KEGG: nmu:Nmul_A2720 Holliday junction DNA helicase RuvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal; Holliday junction ATP-dependent DNA helicase ruvA 403580 10297020 NAL212_0517 Nitrosomonas sp. AL212 Holliday junction ATP-dependent DNA helicase ruvA YP_004293624.1 402999 D 153948 CDS YP_004293625.1 325981223 10297021 403603..404649 1 NC_015222.1 TIGRFAM: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, N-terminal; DNA helicase, Holliday junction RuvB type, C-terminal; KEGG: nmu:Nmul_A2719 Holliday junction DNA helicase RuvB; SMART: ATPase, AAA+ type, core; Holliday junction DNA helicase RuvB 404649 10297021 NAL212_0518 Nitrosomonas sp. AL212 Holliday junction DNA helicase RuvB YP_004293625.1 403603 D 153948 CDS YP_004293626.1 325981224 10297022 404673..405104 1 NC_015222.1 KEGG: ure:UREG_02430 hypothetical protein; hypothetical protein 405104 10297022 NAL212_0519 Nitrosomonas sp. AL212 hypothetical protein YP_004293626.1 404673 D 153948 CDS YP_004293627.1 325981225 10297023 405231..405902 1 NC_015222.1 PFAM: Inhibitor of apoptosis-promoting Bax1-related; KEGG: net:Neut_1715 hypothetical protein; hypothetical protein 405902 10297023 NAL212_0520 Nitrosomonas sp. AL212 hypothetical protein YP_004293627.1 405231 D 153948 CDS YP_004293628.1 325981226 10297024 405988..406167 1 NC_015222.1 KEGG: hna:Hneap_0467 hypothetical protein; hypothetical protein 406167 10297024 NAL212_0521 Nitrosomonas sp. AL212 hypothetical protein YP_004293628.1 405988 D 153948 CDS YP_004293629.1 325981227 10297026 407763..408644 1 NC_015222.1 KEGG: net:Neut_2395 cytochrome c oxidase, subunit II; TIGRFAM: Cytochrome c oxidase, subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal; Cytochrome C oxidase subunit II, transmembrane domain; cytochrome c oxidase subunit II 408644 10297026 NAL212_0523 Nitrosomonas sp. AL212 cytochrome c oxidase subunit II YP_004293629.1 407763 D 153948 CDS YP_004293630.1 325981228 10297027 408657..410237 1 NC_015222.1 KEGG: neu:NE1016 cytochrome c oxidase, subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I 410237 10297027 NAL212_0524 Nitrosomonas sp. AL212 cytochrome c oxidase subunit I YP_004293630.1 408657 D 153948 CDS YP_004293631.1 325981229 10297028 410256..410360 1 NC_015222.1 hypothetical protein 410360 10297028 NAL212_0525 Nitrosomonas sp. AL212 hypothetical protein YP_004293631.1 410256 D 153948 CDS YP_004293632.1 325981230 10297029 410354..410899 1 NC_015222.1 PFAM: Cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: nmu:Nmul_A0185 cytochrome c oxidase assembly protein; cytochrome c oxidase assembly protein CtaG/Cox11 410899 10297029 NAL212_0526 Nitrosomonas sp. AL212 cytochrome c oxidase assembly protein CtaG/Cox11 YP_004293632.1 410354 D 153948 CDS YP_004293633.1 325981231 10297030 410910..411119 1 NC_015222.1 KEGG: neu:NE1014 putative transmembrane protein; putative transmembrane protein 411119 10297030 NAL212_0527 Nitrosomonas sp. AL212 putative transmembrane protein YP_004293633.1 410910 D 153948 CDS YP_004293634.1 325981232 10297031 411153..412010 1 NC_015222.1 KEGG: nmu:Nmul_A0187 cytochrome c oxidase, subunit III; PFAM: Cytochrome c oxidase, subunit III; cytochrome-c oxidase 412010 10297031 NAL212_0528 Nitrosomonas sp. AL212 cytochrome-c oxidase YP_004293634.1 411153 D 153948 CDS YP_004293635.1 325981233 10297032 412201..412923 1 NC_015222.1 PFAM: Surfeit locus 1; KEGG: neu:NE1012 SURF1 family protein; surfeit locus 1 family protein 412923 10297032 NAL212_0529 Nitrosomonas sp. AL212 surfeit locus 1 family protein YP_004293635.1 412201 D 153948 CDS YP_004293636.1 325981234 10297033 412892..413473 1 NC_015222.1 KEGG: nmu:Nmul_A0190 putative transmembrane protein; putative transmembrane protein 413473 10297033 NAL212_0530 Nitrosomonas sp. AL212 putative transmembrane protein YP_004293636.1 412892 D 153948 CDS YP_004293637.1 325981235 10297034 413552..414445 1 NC_015222.1 KEGG: net:Neut_2389 protoheme IX farnesyltransferase; TIGRFAM: Protohaem IX farnesyltransferase; PFAM: UbiA prenyltransferase; protoheme IX farnesyltransferase 414445 10297034 NAL212_0531 Nitrosomonas sp. AL212 protoheme IX farnesyltransferase YP_004293637.1 413552 D 153948 CDS YP_004293638.1 325981236 10297035 complement(414541..415917) 1 NC_015222.1 KEGG: nmu:Nmul_A0193 D-lactate dehydrogenase (cytochrome); PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; D-lactate dehydrogenase 415917 10297035 NAL212_0532 Nitrosomonas sp. AL212 D-lactate dehydrogenase YP_004293638.1 414541 R 153948 CDS YP_004293639.1 325981237 10297036 complement(415941..416516) 1 NC_015222.1 PFAM: Transport-associated; KEGG: net:Neut_2387 transport-associated; transport-associated protein 416516 10297036 NAL212_0533 Nitrosomonas sp. AL212 transport-associated protein YP_004293639.1 415941 R 153948 CDS YP_004293640.1 325981238 10297037 416617..417123 1 NC_015222.1 KEGG: neu:NE1006 CheW-like domain-containing protein; PFAM: CheW-like protein; SMART: CheW-like protein; CheW protein 417123 10297037 NAL212_0534 Nitrosomonas sp. AL212 CheW protein YP_004293640.1 416617 D 153948 CDS YP_004293641.1 325981239 10297038 417192..418094 1 NC_015222.1 TIGRFAM: Acetylglutamate kinase; KEGG: neu:NE1005 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; acetylglutamate kinase 418094 10297038 NAL212_0535 Nitrosomonas sp. AL212 acetylglutamate kinase YP_004293641.1 417192 D 153948 CDS YP_004293642.1 325981240 10297039 complement(418199..418924) 1 NC_015222.1 KEGG: nmu:Nmul_A0673 RNA methyltransferase TrmH, group 1; TIGRFAM: RNA methyltransferase TrmH, group 1; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA methyltransferase, TrmH family, group 1 418924 10297039 NAL212_0536 Nitrosomonas sp. AL212 RNA methyltransferase, TrmH family, group 1 YP_004293642.1 418199 R 153948 CDS YP_004293643.1 325981241 10297040 419045..419296 1 NC_015222.1 hypothetical protein 419296 10297040 NAL212_0537 Nitrosomonas sp. AL212 hypothetical protein YP_004293643.1 419045 D 153948 CDS YP_004293644.1 325981242 10297041 419324..419776 1 NC_015222.1 PFAM: Cytochrome c, class I; KEGG: nhl:Nhal_1555 nitric-oxide reductase; cytochrome c class I 419776 10297041 NAL212_0538 Nitrosomonas sp. AL212 cytochrome c class I YP_004293644.1 419324 D 153948 CDS YP_004293645.1 325981243 10297042 419843..421177 1 NC_015222.1 KEGG: nhl:Nhal_1556 nitric-oxide reductase; PFAM: Cytochrome c oxidase, subunit I; nitric-oxide reductase 421177 10297042 NAL212_0539 Nitrosomonas sp. AL212 nitric-oxide reductase YP_004293645.1 419843 D 153948 CDS YP_004293646.1 325981244 10297043 421183..422019 1 NC_015222.1 PFAM: ATPase, AAA-5; CbbQ/NirQ/NorQ C-terminal; KEGG: nhl:Nhal_1557 ATPase associated with various cellular activities AAA_5; ATPase 422019 10297043 NAL212_0540 Nitrosomonas sp. AL212 ATPase YP_004293646.1 421183 D 153948 CDS YP_004293647.1 325981245 10297044 422022..423977 1 NC_015222.1 KEGG: nhl:Nhal_1558 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor type A 423977 10297044 NAL212_0541 Nitrosomonas sp. AL212 von Willebrand factor type A YP_004293647.1 422022 D 153948 CDS YP_004293648.1 325981246 10297045 424213..427332 1 NC_015222.1 PFAM: DNA methylase N-4/N-6; KEGG: alv:Alvin_1538 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 427332 10297045 NAL212_0542 Nitrosomonas sp. AL212 DNA methylase N-4/N-6 domain-containing protein YP_004293648.1 424213 D 153948 CDS YP_004293649.1 325981247 10297046 427349..430192 1 NC_015222.1 PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: mca:MCA0551 hypothetical protein; type III restriction protein res subunit 430192 10297046 NAL212_0543 Nitrosomonas sp. AL212 type III restriction protein res subunit YP_004293649.1 427349 D 153948 CDS YP_004293650.1 325981248 10297047 complement(430260..431732) 1 NC_015222.1 TIGRFAM: Anthranilate synthase component I, PabB-like; KEGG: nmu:Nmul_A2369 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; anthranilate synthase component I 431732 10297047 NAL212_0544 Nitrosomonas sp. AL212 anthranilate synthase component I YP_004293650.1 430260 R 153948 CDS YP_004293651.1 325981249 10297048 complement(431741..432466) 1 NC_015222.1 TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: neu:NE2149 phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; phosphoglycolate phosphatase 432466 10297048 NAL212_0545 Nitrosomonas sp. AL212 phosphoglycolate phosphatase YP_004293651.1 431741 R 153948 CDS YP_004293652.1 325981250 10297049 complement(432507..433184) 1 NC_015222.1 TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: net:Neut_2096 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 433184 10297049 NAL212_0546 Nitrosomonas sp. AL212 ribulose-phosphate 3-epimerase YP_004293652.1 432507 R 153948 CDS YP_004293653.1 325981251 10297050 complement(433356..433631) 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 433631 10297050 NAL212_0547 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004293653.1 433356 R 153948 CDS YP_004293654.1 325981252 10297051 complement(433733..436015) 1 NC_015222.1 KEGG: sno:Snov_2115 hypothetical protein; hypothetical protein 436015 10297051 NAL212_0548 Nitrosomonas sp. AL212 hypothetical protein YP_004293654.1 433733 R 153948 CDS YP_004293655.1 325981253 10297052 436549..436932 1 NC_015222.1 PFAM: ApaG domain; KEGG: neu:NE1573 ApaG; ApaG domain-containing protein 436932 10297052 NAL212_0549 Nitrosomonas sp. AL212 ApaG domain-containing protein YP_004293655.1 436549 D 153948 CDS YP_004293656.1 325981254 10297053 436990..437694 1 NC_015222.1 PFAM: Tetrapyrrole methylase; KEGG: nmu:Nmul_A1067 uroporphyrin-III C/tetrapyrrole methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 437694 10297053 NAL212_0550 Nitrosomonas sp. AL212 uroporphyrin-III C/tetrapyrrole methyltransferase YP_004293656.1 436990 D 153948 CDS YP_004293657.1 325981255 10297054 complement(437733..438128) 1 NC_015222.1 TIGRFAM: Glyoxalase I; KEGG: nmu:Nmul_A2625 glyoxalase I; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase 438128 10297054 NAL212_0551 Nitrosomonas sp. AL212 lactoylglutathione lyase YP_004293657.1 437733 R 153948 CDS YP_004293658.1 325981256 10297055 complement(438129..438317) 1 NC_015222.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: neu:NE1426 rubredoxin:rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 438317 10297055 NAL212_0552 Nitrosomonas sp. AL212 rubredoxin-type Fe(Cys)4 protein YP_004293658.1 438129 R 153948 CDS YP_004293659.1 325981257 10297056 438370..439227 1 NC_015222.1 KEGG: nmu:Nmul_A2627 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 439227 10297056 NAL212_0553 Nitrosomonas sp. AL212 phosphomethylpyrimidine kinase YP_004293659.1 438370 D 153948 CDS YP_004293660.1 325981258 10297057 439214..439846 1 NC_015222.1 TIGRFAM: Thiamine monophosphate synthase; HAMAP: Thiamine monophosphate synthase; KEGG: neu:NE1424 thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 439846 10297057 NAL212_0554 Nitrosomonas sp. AL212 thiamine-phosphate pyrophosphorylase YP_004293660.1 439214 D 153948 CDS YP_004293661.1 325981259 10297058 439903..441183 1 NC_015222.1 TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; KEGG: nmu:Nmul_A2629 glutamate-1-semialdehyde aminotransferase; PFAM: Aminotransferase class-III; glutamate-1-semialdehyde 2,1-aminomutase 441183 10297058 NAL212_0555 Nitrosomonas sp. AL212 glutamate-1-semialdehyde 2,1-aminomutase YP_004293661.1 439903 D 153948 CDS YP_004293662.1 325981260 10297059 complement(441272..441937) 1 NC_015222.1 PFAM: Cytochrome c, class I; KEGG: neu:NE0273 cytochrome c, class IC:cytochrome c, class I; cytochrome c class I 441937 10297059 NAL212_0556 Nitrosomonas sp. AL212 cytochrome c class I YP_004293662.1 441272 R 153948 CDS YP_004293663.1 325981261 10297060 442075..442668 1 NC_015222.1 PFAM: Sporulation-related domain; KEGG: net:Neut_0306 hypothetical protein; sporulation domain-containing protein 442668 10297060 NAL212_0557 Nitrosomonas sp. AL212 sporulation domain-containing protein YP_004293663.1 442075 D 153948 CDS YP_004293664.1 325981262 10297061 442778..443584 1 NC_015222.1 TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: neu:NE0275 methionine aminopeptidase; PFAM: Peptidase M24, structural domain; methionine aminopeptidase 443584 10297061 NAL212_0558 Nitrosomonas sp. AL212 methionine aminopeptidase YP_004293664.1 442778 D 153948 CDS YP_004293665.1 325981263 10297062 443613..444335 1 NC_015222.1 TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; KEGG: nmu:Nmul_A0066 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH 444335 10297062 NAL212_0559 Nitrosomonas sp. AL212 ribonuclease PH YP_004293665.1 443613 D 153948 CDS YP_004293666.1 325981264 10297063 444346..444948 1 NC_015222.1 TIGRFAM: Ham1-like protein; KEGG: nmu:Nmul_A0067 putative deoxyribonucleotide triphosphate pyrophosphatase; PFAM: Ham1-like protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 444948 10297063 NAL212_0560 Nitrosomonas sp. AL212 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_004293666.1 444346 D 153948 CDS YP_004293667.1 325981265 10297064 445123..446016 1 NC_015222.1 KEGG: ppr:PBPRB1378 hypothetical protein; hypothetical protein 446016 10297064 NAL212_0561 Nitrosomonas sp. AL212 hypothetical protein YP_004293667.1 445123 D 153948 CDS YP_004293668.1 325981266 10297065 446345..447208 1 NC_015222.1 KEGG: lch:Lcho_2325 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif putative anchor domain-containing protein 447208 10297065 NAL212_0562 Nitrosomonas sp. AL212 PEP motif putative anchor domain-containing protein YP_004293668.1 446345 D 153948 CDS YP_004293669.1 325981267 10297066 447229..447534 1 NC_015222.1 KEGG: shi:Shel_22480 hypothetical protein; hypothetical protein 447534 10297066 NAL212_0563 Nitrosomonas sp. AL212 hypothetical protein YP_004293669.1 447229 D 153948 CDS YP_004293670.1 325981268 10297068 complement(447944..448168) 1 NC_015222.1 KEGG: rrs:RoseRS_3426 hypothetical protein; hypothetical protein 448168 10297068 NAL212_0565 Nitrosomonas sp. AL212 hypothetical protein YP_004293670.1 447944 R 153948 CDS YP_004293671.1 325981269 10297069 complement(448165..448422) 1 NC_015222.1 KEGG: nwa:Nwat_1966 hypothetical protein; hypothetical protein 448422 10297069 NAL212_0566 Nitrosomonas sp. AL212 hypothetical protein YP_004293671.1 448165 R 153948 CDS YP_004293672.1 325981270 10297070 complement(448475..449317) 1 NC_015222.1 TIGRFAM: S-formylglutathione hydrolase; KEGG: net:Neut_1386 carboxylesterase; PFAM: Putative esterase; S-formylglutathione hydrolase 449317 10297070 NAL212_0567 Nitrosomonas sp. AL212 S-formylglutathione hydrolase YP_004293672.1 448475 R 153948 CDS YP_004293673.1 325981271 10297071 complement(449320..450426) 1 NC_015222.1 KEGG: bav:BAV3289 glutathione-dependent formaldehyde dehydrogenase; TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 450426 10297071 NAL212_0568 Nitrosomonas sp. AL212 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase YP_004293673.1 449320 R 153948 CDS YP_004293674.1 325981272 10297072 complement(450442..450933) 1 NC_015222.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: net:Neut_0914 protein tyrosine phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase 450933 10297072 NAL212_0569 Nitrosomonas sp. AL212 protein tyrosine phosphatase YP_004293674.1 450442 R 153948 CDS YP_004293675.1 325981273 10297073 451324..453003 1 NC_015222.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: mgm:Mmc1_1921 serine/threonine protein kinase; serine/threonine protein kinase 453003 10297073 NAL212_0570 Nitrosomonas sp. AL212 serine/threonine protein kinase YP_004293675.1 451324 D 153948 CDS YP_004293676.1 325981274 10297074 complement(453048..454619) 1 NC_015222.1 KEGG: bid:Bind_2756 galactose oxidase; PFAM: Domain of unknown function DUF1929; Glyoxal oxidase, N-terminal; galactose oxidase 454619 10297074 NAL212_0571 Nitrosomonas sp. AL212 galactose oxidase YP_004293676.1 453048 R 153948 CDS YP_004293677.1 325981275 10297075 454988..455833 1 NC_015222.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: slt:Slit_1376 putative signal transduction protein; metal-dependent hydrolase HDOD 455833 10297075 NAL212_0572 Nitrosomonas sp. AL212 metal-dependent hydrolase HDOD YP_004293677.1 454988 D 153948 CDS YP_004293678.1 325981276 10297076 complement(455845..456705) 1 NC_015222.1 KEGG: nmu:Nmul_A2562 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; indole-3-glycerol-phosphate synthase 456705 10297076 NAL212_0573 Nitrosomonas sp. AL212 indole-3-glycerol-phosphate synthase YP_004293678.1 455845 R 153948 CDS YP_004293679.1 325981277 10297077 complement(456711..457736) 1 NC_015222.1 TIGRFAM: Anthranilate phosphoribosyl transferase; KEGG: nmu:Nmul_A2563 anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; anthranilate phosphoribosyltransferase 457736 10297077 NAL212_0574 Nitrosomonas sp. AL212 anthranilate phosphoribosyltransferase YP_004293679.1 456711 R 153948 CDS YP_004293680.1 325981278 10297078 complement(457764..458327) 1 NC_015222.1 TIGRFAM: Anthranilate synthase, glutamine amidotransferase domain; KEGG: slt:Slit_0277 glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I, C-terminal; glutamine amidotransferase of anthranilate synthase 458327 10297078 NAL212_0575 Nitrosomonas sp. AL212 glutamine amidotransferase of anthranilate synthase YP_004293680.1 457764 R 153948 CDS YP_004293681.1 325981279 10297079 458569..458988 1 NC_015222.1 KEGG: nmu:Nmul_A1951 30S ribosomal protein S6; TIGRFAM: Ribosomal protein S6; PFAM: Ribosomal protein S6; 30S ribosomal protein S6 458988 10297079 NAL212_0576 Nitrosomonas sp. AL212 30S ribosomal protein S6 YP_004293681.1 458569 D 153948 CDS YP_004293682.1 325981280 10297080 459000..459296 1 NC_015222.1 KEGG: nmu:Nmul_A1950 primosomal replication protein N; manually curated; PFAM: Primosome PriB/single-strand DNA-binding; single-strand binding protein/Primosomal replication protein n 459296 10297080 NAL212_0577 Nitrosomonas sp. AL212 single-strand binding protein/Primosomal replication protein n YP_004293682.1 459000 D 153948 CDS YP_004293683.1 325981281 10297081 459315..459599 1 NC_015222.1 KEGG: nmu:Nmul_A1949 30S ribosomal protein S18; TIGRFAM: Ribosomal protein S18; PFAM: Ribosomal protein S18; 30S ribosomal protein S18 459599 10297081 NAL212_0578 Nitrosomonas sp. AL212 30S ribosomal protein S18 YP_004293683.1 459315 D 153948 CDS YP_004293684.1 325981282 10297082 459611..460066 1 NC_015222.1 KEGG: nmu:Nmul_A1948 ribosomal protein L9; TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; PFAM: Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal; 50S ribosomal protein L9 460066 10297082 NAL212_0579 Nitrosomonas sp. AL212 50S ribosomal protein L9 YP_004293684.1 459611 D 153948 CDS YP_004293685.1 325981283 10297083 460175..461563 1 NC_015222.1 TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: nmu:Nmul_A1947 replicative DNA helicase; SMART: ATPase, AAA+ type, core; replicative DNA helicase 461563 10297083 NAL212_0580 Nitrosomonas sp. AL212 replicative DNA helicase YP_004293685.1 460175 D 153948 CDS YP_004293686.1 325981284 10297084 461689..462909 1 NC_015222.1 KEGG: nmu:Nmul_A0578 hypothetical protein; hypothetical protein 462909 10297084 NAL212_0581 Nitrosomonas sp. AL212 hypothetical protein YP_004293686.1 461689 D 153948 CDS YP_004293687.1 325981285 10297085 complement(462975..464339) 1 NC_015222.1 KEGG: gca:Galf_0920 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; metal dependent phosphohydrolase 464339 10297085 NAL212_0582 Nitrosomonas sp. AL212 metal dependent phosphohydrolase YP_004293687.1 462975 R 153948 CDS YP_004293688.1 325981286 10297086 complement(464504..467278) 1 NC_015222.1 KEGG: syp:SYNPCC7002_A2132 DNA methyltransferase; DNA methyltransferase 467278 10297086 NAL212_0583 Nitrosomonas sp. AL212 DNA methyltransferase YP_004293688.1 464504 R 153948 CDS YP_004293689.1 325981287 10297088 467613..468590 1 NC_015222.1 KEGG: reu:Reut_A1455 glutathione S-transferase; PFAM: Glutathione S-transferase, C-terminal; glutathione transferase 468590 10297088 NAL212_0585 Nitrosomonas sp. AL212 glutathione transferase YP_004293689.1 467613 D 153948 CDS YP_004293690.1 325981288 10297090 469048..470022 1 NC_015222.1 KEGG: neu:NE0101 glycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; phosphoglycerate dehydrogenase 470022 10297090 NAL212_0587 Nitrosomonas sp. AL212 phosphoglycerate dehydrogenase YP_004293690.1 469048 D 153948 CDS YP_004293691.1 325981289 10297092 complement(470146..470442) 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: net:Neut_1813 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 470442 10297092 NAL212_0589 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004293691.1 470146 R 153948 CDS YP_004293692.1 325981290 10297093 complement(470695..471495) 1 NC_015222.1 KEGG: btl:BALH_1430 hypothetical protein; hypothetical protein 471495 10297093 NAL212_0590 Nitrosomonas sp. AL212 hypothetical protein YP_004293692.1 470695 R 153948 CDS YP_004293693.1 325981291 10297094 complement(471552..472256) 1 NC_015222.1 KEGG: scl:sce8365 hypothetical protein; hypothetical protein 472256 10297094 NAL212_0591 Nitrosomonas sp. AL212 hypothetical protein YP_004293693.1 471552 R 153948 CDS YP_004293694.1 325981292 10297095 complement(472448..472750) 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: bvi:Bcep1808_7228 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 472750 10297095 NAL212_0592 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004293694.1 472448 R 153948 CDS YP_004293695.1 325981293 10297096 473038..473943 1 NC_015222.1 KEGG: tra:Trad_0294 Stf0 sulfotransferase; hypothetical protein 473943 10297096 NAL212_0593 Nitrosomonas sp. AL212 hypothetical protein YP_004293695.1 473038 D 153948 CDS YP_004293696.1 325981294 10297097 474022..475242 1 NC_015222.1 TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: scl:sce2384 putative hydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; amidohydrolase 475242 10297097 NAL212_0594 Nitrosomonas sp. AL212 amidohydrolase YP_004293696.1 474022 D 153948 CDS YP_004293697.1 325981295 10297098 complement(475353..475457) 1 NC_015222.1 hypothetical protein 475457 10297098 NAL212_0595 Nitrosomonas sp. AL212 hypothetical protein YP_004293697.1 475353 R 153948 CDS YP_004293698.1 325981296 10297099 475704..475952 1 NC_015222.1 KEGG: neu:NE1583 hypothetical protein; TIGRFAM: Prevent-host-death protein; PFAM: Prevent-host-death protein; prevent-host-death family protein 475952 10297099 NAL212_0596 Nitrosomonas sp. AL212 prevent-host-death family protein YP_004293698.1 475704 D 153948 CDS YP_004293699.1 325981297 10297100 475942..476238 1 NC_015222.1 KEGG: neu:NE1584 hypothetical protein; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system; RelE/StbE family addiction module toxin 476238 10297100 NAL212_0597 Nitrosomonas sp. AL212 RelE/StbE family addiction module toxin YP_004293699.1 475942 D 153948 CDS YP_004293700.1 325981298 10297101 complement(476403..476807) 1 NC_015222.1 PFAM: Transposase IS200-like; KEGG: app:CAP2UW1_3088 protein of unknown function DUF1568; transposase IS200-family protein 476807 10297101 NAL212_0598 Nitrosomonas sp. AL212 transposase IS200-family protein YP_004293700.1 476403 R 153948 CDS YP_004293701.1 325981299 10297103 477304..478326 1 NC_015222.1 PFAM: Integrase, catalytic core; Resolvase, helix-turn-helix domain; KEGG: pst:PSPTO_B0040 ISPsy4, transposase; integrase catalytic region 478326 10297103 NAL212_0600 Nitrosomonas sp. AL212 integrase catalytic region YP_004293701.1 477304 D 153948 CDS YP_004293702.1 325981300 10297104 478323..479105 1 NC_015222.1 KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 479105 10297104 NAL212_0601 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004293702.1 478323 D 153948 CDS YP_004293703.1 325981301 10297105 complement(479165..479386) 1 NC_015222.1 KEGG: pph:Ppha_2372 addiction module component, TIGR02574 family; TIGRFAM: Addiction module component, CHP02574; PFAM: Addiction module component, CHP02574; addiction module protein 479386 10297105 NAL212_0602 Nitrosomonas sp. AL212 addiction module protein YP_004293703.1 479165 R 153948 CDS YP_004293704.1 325981302 10297106 complement(479680..480213) 1 NC_015222.1 PFAM: Transposase IS200-like; KEGG: app:CAP2UW1_3088 protein of unknown function DUF1568; transposase IS200-family protein 480213 10297106 NAL212_0603 Nitrosomonas sp. AL212 transposase IS200-family protein YP_004293704.1 479680 R 153948 CDS YP_004293705.1 325981303 10297107 complement(480325..480954) 1 NC_015222.1 KEGG: rsh:Rsph17029_2336 hypothetical protein; hypothetical protein 480954 10297107 NAL212_0604 Nitrosomonas sp. AL212 hypothetical protein YP_004293705.1 480325 R 153948 CDS YP_004293706.1 325981304 10297108 complement(481121..484585) 1 NC_015222.1 TIGRFAM: Transcription-repair coupling factor; PFAM: Transcription-repair-coupling factor domain; Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: nmu:Nmul_A0639 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; transcription-repair coupling factor 484585 10297108 NAL212_0605 Nitrosomonas sp. AL212 transcription-repair coupling factor YP_004293706.1 481121 R 153948 CDS YP_004293707.1 325981305 10297109 485089..485922 1 NC_015222.1 KEGG: dbr:Deba_0069 hypothetical protein; hypothetical protein 485922 10297109 NAL212_0606 Nitrosomonas sp. AL212 hypothetical protein YP_004293707.1 485089 D 153948 CDS YP_004293708.1 325981306 10297110 486097..486696 1 NC_015222.1 KEGG: tgr:Tgr7_0639 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase 486696 10297110 NAL212_0607 Nitrosomonas sp. AL212 phosphoglycerate mutase YP_004293708.1 486097 D 153948 CDS YP_004293709.1 325981307 10297111 complement(486781..487827) 1 NC_015222.1 PFAM: Secretion protein HlyD; KEGG: llo:LLO_0413 coiled-coil protein; secretion protein HlyD family protein 487827 10297111 NAL212_0608 Nitrosomonas sp. AL212 secretion protein HlyD family protein YP_004293709.1 486781 R 153948 CDS YP_004293710.1 325981308 10297112 complement(487811..490006) 1 NC_015222.1 KEGG: dia:Dtpsy_0734 outer membrane protein-like protein; hypothetical protein 490006 10297112 NAL212_0609 Nitrosomonas sp. AL212 hypothetical protein YP_004293710.1 487811 R 153948 CDS YP_004293711.1 325981309 10297113 complement(489979..491304) 1 NC_015222.1 PFAM: Glycosyl transferase, family 2; KEGG: tai:Taci_0167 glycosyl transferase family 2; family 2 glycosyl transferase 491304 10297113 NAL212_0610 Nitrosomonas sp. AL212 family 2 glycosyl transferase YP_004293711.1 489979 R 153948 CDS YP_004293712.1 325981310 10297114 complement(491308..492690) 1 NC_015222.1 KEGG: dia:Dtpsy_0736 hypothetical protein; hypothetical protein 492690 10297114 NAL212_0611 Nitrosomonas sp. AL212 hypothetical protein YP_004293712.1 491308 R 153948 CDS YP_004293713.1 325981311 10297115 493259..493621 1 NC_015222.1 KEGG: net:Neut_1958 hypothetical protein; hypothetical protein 493621 10297115 NAL212_0612 Nitrosomonas sp. AL212 hypothetical protein YP_004293713.1 493259 D 153948 CDS YP_004293714.1 325981312 10297116 493766..494539 1 NC_015222.1 PFAM: Enterobacterial TraT complement resistance; KEGG: net:Neut_1959 TraT complement resistance family protein; TraT complement resistance family protein 494539 10297116 NAL212_0613 Nitrosomonas sp. AL212 TraT complement resistance family protein YP_004293714.1 493766 D 153948 CDS YP_004293715.1 325981313 10297117 494671..495018 1 NC_015222.1 KEGG: net:Neut_1960 hypothetical protein; hypothetical protein 495018 10297117 NAL212_0614 Nitrosomonas sp. AL212 hypothetical protein YP_004293715.1 494671 D 153948 CDS YP_004293716.1 325981314 10297118 complement(495022..495699) 1 NC_015222.1 KEGG: eba:ebA2659 ExsB protein; TIGRFAM: Queuosine synthesis; PFAM: Queuosine synthesis; exsB protein 495699 10297118 NAL212_0615 Nitrosomonas sp. AL212 exsB protein YP_004293716.1 495022 R 153948 CDS YP_004293717.1 325981315 10297119 complement(495832..496491) 1 NC_015222.1 PFAM: Radical SAM; KEGG: nmu:Nmul_A2711 radical SAM family protein; Radical SAM domain-containing protein 496491 10297119 NAL212_0616 Nitrosomonas sp. AL212 Radical SAM domain-containing protein YP_004293717.1 495832 R 153948 CDS YP_004293718.1 325981316 10297120 complement(496582..497484) 1 NC_015222.1 TIGRFAM: Tol-Pal system, YbgF; KEGG: neu:NE0220 TPR repeat-containing protein; tol-pal system protein YbgF 497484 10297120 NAL212_0617 Nitrosomonas sp. AL212 tol-pal system protein YbgF YP_004293718.1 496582 R 153948 CDS YP_004293719.1 325981317 10297121 complement(497487..498011) 1 NC_015222.1 KEGG: neu:NE0219 outer membrane protein; TIGRFAM: Peptidoglycan-associated lipoprotein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; peptidoglycan-associated lipoprotein 498011 10297121 NAL212_0618 Nitrosomonas sp. AL212 peptidoglycan-associated lipoprotein YP_004293719.1 497487 R 153948 CDS YP_004293720.1 325981318 10297122 complement(498045..499343) 1 NC_015222.1 KEGG: nmu:Nmul_A2714 translocation protein TolB; TIGRFAM: Tol-Pal system beta propeller repeat-containing protein, TolB; PFAM: TolB, N-terminal; WD40-like Beta Propeller; Tol-Pal system beta propeller repeat-containing protein TolB 499343 10297122 NAL212_0619 Nitrosomonas sp. AL212 Tol-Pal system beta propeller repeat-containing protein TolB YP_004293720.1 498045 R 153948 CDS YP_004293721.1 325981319 10297123 complement(499399..500343) 1 NC_015222.1 KEGG: nmu:Nmul_A2715 TonB-like; TIGRFAM: Tol-Pal system, TolA; PFAM: Tol-Pal system, TolA; protein TolA 500343 10297123 NAL212_0620 Nitrosomonas sp. AL212 protein TolA YP_004293721.1 499399 R 153948 CDS YP_004293722.1 325981320 10297124 complement(500354..500767) 1 NC_015222.1 KEGG: neu:NE0216 biopolymer transport protein ExbD/TolR; TIGRFAM: Biopolymer transport, TolR; PFAM: Biopolymer transport protein ExbD/TolR; protein TolR 500767 10297124 NAL212_0621 Nitrosomonas sp. AL212 protein TolR YP_004293722.1 500354 R 153948 CDS YP_004293723.1 325981321 10297125 complement(500787..501467) 1 NC_015222.1 KEGG: net:Neut_0286 MotA/TolQ/ExbB proton channel; TIGRFAM: Tol-Pal system, TolQ; PFAM: MotA/TolQ/ExbB proton channel; protein TolQ 501467 10297125 NAL212_0622 Nitrosomonas sp. AL212 protein TolQ YP_004293723.1 500787 R 153948 CDS YP_004293724.1 325981322 10297126 complement(501464..501874) 1 NC_015222.1 KEGG: neu:NE0214 4-hydroxybenzoyl-CoA thioesterase family protein; TIGRFAM: Tol-Pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily; tol-pal system-associated acyl-CoA thioesterase 501874 10297126 NAL212_0623 Nitrosomonas sp. AL212 tol-pal system-associated acyl-CoA thioesterase YP_004293724.1 501464 R 153948 CDS YP_004293725.1 325981323 10297127 complement(501897..502850) 1 NC_015222.1 TIGRFAM: Cysteine synthase K/M; Cysteine synthase B; KEGG: nmu:Nmul_A2221 cysteine synthase B; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; cysteine synthase 502850 10297127 NAL212_0624 Nitrosomonas sp. AL212 cysteine synthase YP_004293725.1 501897 R 153948 CDS YP_004293726.1 325981324 10297128 complement(502927..503214) 1 NC_015222.1 TIGRFAM: Competence protein ComEA, helix-hairpin-helix domain; PFAM: Helix-hairpin-helix motif; KEGG: nmu:Nmul_A2222 competence protein ComEA helix-hairpin-helix region; SMART: Helix-hairpin-helix DNA-binding motif, class 1; competence protein ComEA 503214 10297128 NAL212_0625 Nitrosomonas sp. AL212 competence protein ComEA YP_004293726.1 502927 R 153948 CDS YP_004293727.1 325981325 10297129 complement(503408..505060) 1 NC_015222.1 PFAM: Biopterin transport-related protein BT1; KEGG: nmu:Nmul_A0956 hypothetical protein; biopterin transport-like protein BT1 505060 10297129 NAL212_0626 Nitrosomonas sp. AL212 biopterin transport-like protein BT1 YP_004293727.1 503408 R 153948 CDS YP_004293728.1 325981326 10297130 complement(505094..506233) 1 NC_015222.1 PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; KEGG: neu:NE1508 HtrA-like serine protease signal peptide protein; SMART: PDZ/DHR/GLGF; HtrA2 peptidase 506233 10297130 NAL212_0627 Nitrosomonas sp. AL212 HtrA2 peptidase YP_004293728.1 505094 R 153948 CDS YP_004293729.1 325981327 10297131 506312..507058 1 NC_015222.1 KEGG: neu:NE1509 hypothetical protein; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3; NGG1p interacting factor 3 protein, NIF3 507058 10297131 NAL212_0628 Nitrosomonas sp. AL212 NGG1p interacting factor 3 protein, NIF3 YP_004293729.1 506312 D 153948 CDS YP_004293730.1 325981328 10297132 507277..508479 1 NC_015222.1 KEGG: nmu:Nmul_A2446 MltA; PFAM: Lytic transglycosylase MltA; 3D; SMART: Lytic transglycosylase MltA; MltA domain-containing protein 508479 10297132 NAL212_0629 Nitrosomonas sp. AL212 MltA domain-containing protein YP_004293730.1 507277 D 153948 CDS YP_004293731.1 325981329 10297133 complement(508525..509247) 1 NC_015222.1 PFAM: Disulphide bond isomerase, DsbC/G, N-terminal; KEGG: neu:NE1511 hypothetical protein; disulfide bond isomerase DsbC/G 509247 10297133 NAL212_0630 Nitrosomonas sp. AL212 disulfide bond isomerase DsbC/G YP_004293731.1 508525 R 153948 CDS YP_004293732.1 325981330 10297134 complement(509273..510442) 1 NC_015222.1 KEGG: nmu:Nmul_A2444 ubiquinone biosynthesis hydroxylase family protein; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Monooxygenase, FAD-binding; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase 510442 10297134 NAL212_0631 Nitrosomonas sp. AL212 UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase YP_004293732.1 509273 R 153948 CDS YP_004293733.1 325981331 10297136 511071..512048 1 NC_015222.1 TIGRFAM: Cysteine synthase K/M; Cysteine synthase A; KEGG: mmb:Mmol_0796 cysteine synthase A; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; cysteine synthase 512048 10297136 NAL212_0632 Nitrosomonas sp. AL212 cysteine synthase YP_004293733.1 511071 D 153948 CDS YP_004293734.1 325981332 10297137 512096..512998 1 NC_015222.1 KEGG: nmu:Nmul_A2073 serine O-acetyltransferase; Serine O-acetyltransferase 512998 10297137 NAL212_0633 Nitrosomonas sp. AL212 Serine O-acetyltransferase YP_004293734.1 512096 D 153948 CDS YP_004293735.1 325981333 10297138 513024..513431 1 NC_015222.1 PFAM: Domain of unknown function DUF336; KEGG: nmu:Nmul_A0738 hypothetical protein; hypothetical protein 513431 10297138 NAL212_0634 Nitrosomonas sp. AL212 hypothetical protein YP_004293735.1 513024 D 153948 CDS YP_004293736.1 325981334 10297139 513589..515205 1 NC_015222.1 KEGG: amr:AM1_6172 IS5 family transposase; IS5 family transposase 515205 10297139 NAL212_0635 Nitrosomonas sp. AL212 IS5 family transposase YP_004293736.1 513589 D 153948 CDS YP_004293737.1 325981335 10297140 complement(515281..515775) 1 NC_015222.1 PFAM: Protein of unknown function DUF2165, transmembrane; KEGG: hch:HCH_05440 small integral membrane protein; hypothetical protein 515775 10297140 NAL212_0636 Nitrosomonas sp. AL212 hypothetical protein YP_004293737.1 515281 R 153948 CDS YP_004293738.1 325981336 10297141 complement(515875..516732) 1 NC_015222.1 KEGG: nmu:Nmul_A0990 import inner membrane translocase, subunit Tim44; PFAM: Membrane transporter, Tim44-related/Ribosomal protein L45; SMART: Membrane transporter, Tim44-related/Ribosomal protein L45; import inner membrane translocase subunit Tim44 516732 10297141 NAL212_0637 Nitrosomonas sp. AL212 import inner membrane translocase subunit Tim44 YP_004293738.1 515875 R 153948 CDS YP_004293739.1 325981337 10297142 complement(516864..517292) 1 NC_015222.1 manually curated; KEGG: nmu:Nmul_A1395 hypothetical protein; hypothetical protein 517292 10297142 NAL212_0638 Nitrosomonas sp. AL212 hypothetical protein YP_004293739.1 516864 R 153948 CDS YP_004293740.1 325981338 10297143 complement(517344..517907) 1 NC_015222.1 KEGG: ppw:PputW619_0012 hypothetical protein; hypothetical protein 517907 10297143 NAL212_0639 Nitrosomonas sp. AL212 hypothetical protein YP_004293740.1 517344 R 153948 CDS YP_004293741.1 325981339 10297144 complement(518178..519107) 1 NC_015222.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nmu:Nmul_A1145 transcriptional regulator CysB-like protein; LysR family transcriptional regulator 519107 10297144 NAL212_0640 Nitrosomonas sp. AL212 LysR family transcriptional regulator YP_004293741.1 518178 R 153948 CDS YP_004293742.1 325981340 10297145 519541..519759 1 NC_015222.1 KEGG: gca:Galf_1982 hypothetical protein; hypothetical protein 519759 10297145 NAL212_0641 Nitrosomonas sp. AL212 hypothetical protein YP_004293742.1 519541 D 153948 CDS YP_004293743.1 325981341 10297146 519813..521555 1 NC_015222.1 KEGG: gca:Galf_1981 nitrite and sulphite reductase 4Fe-4S region; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; ferredoxin--nitrite reductase 521555 10297146 NAL212_0642 Nitrosomonas sp. AL212 ferredoxin--nitrite reductase YP_004293743.1 519813 D 153948 CDS YP_004293744.1 325981342 10297147 521563..522096 1 NC_015222.1 PFAM: Uncharacterised conserved protein UCP030820; KEGG: hse:Hsero_3100 hypothetical protein; hypothetical protein 522096 10297147 NAL212_0643 Nitrosomonas sp. AL212 hypothetical protein YP_004293744.1 521563 D 153948 CDS YP_004293745.1 325981343 10297148 522089..522787 1 NC_015222.1 TIGRFAM: Adenylylsulphate reductase, thioredoxin dependent; Phosphoadenosine phosphosulphate reductase CysH-type; KEGG: slt:Slit_1033 adenylylsulfate reductase, thioredoxin dependent; PFAM: Phosphoadenosine phosphosulphate reductase; adenylylsulfate reductase 522787 10297148 NAL212_0644 Nitrosomonas sp. AL212 adenylylsulfate reductase YP_004293745.1 522089 D 153948 CDS YP_004293746.1 325981344 10297150 523397..523801 1 NC_015222.1 PFAM: Signal transduction response regulator, receiver domain; KEGG: slt:Slit_1160 multi-sensor hybrid histidine kinase; SMART: Signal transduction response regulator, receiver domain; response regulator receiver protein 523801 10297150 NAL212_0646 Nitrosomonas sp. AL212 response regulator receiver protein YP_004293746.1 523397 D 153948 CDS YP_004293747.1 325981345 10297151 523915..527454 1 NC_015222.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nmu:Nmul_A1150 hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 527454 10297151 NAL212_0647 Nitrosomonas sp. AL212 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004293747.1 523915 D 153948 CDS YP_004293748.1 325981346 10297152 527461..527847 1 NC_015222.1 KEGG: rcu:RCOM_1880270 two-component sensor protein histidine protein kinase, putative; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: Signal transduction histidine kinase, phosphotransfer (Hpt) domain; Hpt domain-containing protein 527847 10297152 NAL212_0648 Nitrosomonas sp. AL212 Hpt domain-containing protein YP_004293748.1 527461 D 153948 CDS YP_004293749.1 325981347 10297153 528154..529281 1 NC_015222.1 KEGG: nmu:Nmul_A1151 NAD(P)(+) transhydrogenase (AB-specific); PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; NAD(P)(+) transhydrogenase 529281 10297153 NAL212_0649 Nitrosomonas sp. AL212 NAD(P)(+) transhydrogenase YP_004293749.1 528154 D 153948 CDS YP_004293750.1 325981348 10297154 529360..529668 1 NC_015222.1 KEGG: nmu:Nmul_A1152 transmembrane NAD(P) transhydrogenase (alpha subunit part 2); transmembrane NAD(P) transhydrogenase subunit alpha 529668 10297154 NAL212_0650 Nitrosomonas sp. AL212 transmembrane NAD(P) transhydrogenase subunit alpha YP_004293750.1 529360 D 153948 CDS YP_004293751.1 325981349 10297155 529668..531050 1 NC_015222.1 KEGG: neu:NE0861 NAD(P) transhydrogenase beta subunit; PFAM: NAD(P) transhydrogenase, beta subunit; NAD(P)(+) transhydrogenase 531050 10297155 NAL212_0651 Nitrosomonas sp. AL212 NAD(P)(+) transhydrogenase YP_004293751.1 529668 D 153948 CDS YP_004293752.1 325981350 10297156 531050..531154 1 NC_015222.1 hypothetical protein 531154 10297156 NAL212_0652 Nitrosomonas sp. AL212 hypothetical protein YP_004293752.1 531050 D 153948 CDS YP_004293753.1 325981351 10297157 complement(531157..532668) 1 NC_015222.1 KEGG: net:Neut_1199 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold-4; SMART: Diguanylate phosphodiesterase, EAL domain; diguanylate phosphodiesterase 532668 10297157 NAL212_0653 Nitrosomonas sp. AL212 diguanylate phosphodiesterase YP_004293753.1 531157 R 153948 CDS YP_004293754.1 325981352 10297158 complement(532742..533776) 1 NC_015222.1 PFAM: Bisphosphoglycerate-independent phosphoglycerate mutase; KEGG: nmu:Nmul_A2416 hypothetical protein; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 533776 10297158 NAL212_0654 Nitrosomonas sp. AL212 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_004293754.1 532742 R 153948 CDS YP_004293755.1 325981353 10297159 533990..535240 1 NC_015222.1 TIGRFAM: Isocitrate dehydrogenase NADP-dependent, prokaryotic; KEGG: nmu:Nmul_A2245 isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase 535240 10297159 NAL212_0655 Nitrosomonas sp. AL212 isocitrate dehydrogenase YP_004293755.1 533990 D 153948 CDS YP_004293756.1 325981354 10297160 complement(535412..535615) 1 NC_015222.1 KEGG: net:Neut_2046 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 535615 10297160 NAL212_0656 Nitrosomonas sp. AL212 cold-shock DNA-binding domain-containing protein YP_004293756.1 535412 R 153948 CDS YP_004293757.1 325981355 10297161 536529..536738 1 NC_015222.1 hypothetical protein 536738 10297161 NAL212_0657 Nitrosomonas sp. AL212 hypothetical protein YP_004293757.1 536529 D 153948 CDS YP_004293758.1 325981356 10297162 536982..537290 1 NC_015222.1 PFAM: Adaptor protein ClpS, core; KEGG: nmu:Nmul_A2247 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 537290 10297162 NAL212_0658 Nitrosomonas sp. AL212 ATP-dependent Clp protease adaptor protein ClpS YP_004293758.1 536982 D 153948 CDS YP_004293759.1 325981357 10297163 537292..539547 1 NC_015222.1 TIGRFAM: ATP-dependent Clp protease ATP-binding subunit ClpA; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: nmu:Nmul_A2248 ATPase with chaperone activity; SMART: ATPase, AAA+ type, core; ATP-dependent Clp protease ATP-binding protein ClpA 539547 10297163 NAL212_0659 Nitrosomonas sp. AL212 ATP-dependent Clp protease ATP-binding protein ClpA YP_004293759.1 537292 D 153948 CDS YP_004293760.1 325981358 10297164 complement(539885..543043) 1 NC_015222.1 KEGG: nmu:Nmul_A2108 heavy metal efflux pump CzcA; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; CzcA family heavy metal efflux pump 543043 10297164 NAL212_0660 Nitrosomonas sp. AL212 CzcA family heavy metal efflux pump YP_004293760.1 539885 R 153948 CDS YP_004293761.1 325981359 10297165 complement(543076..544575) 1 NC_015222.1 KEGG: nmu:Nmul_A2107 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 544575 10297165 NAL212_0661 Nitrosomonas sp. AL212 RND family efflux transporter MFP subunit YP_004293761.1 543076 R 153948 CDS YP_004293762.1 325981360 10297166 complement(544579..546006) 1 NC_015222.1 PFAM: Outer membrane efflux protein; KEGG: nmu:Nmul_A2106 outer membrane efflux protein; outer membrane efflux protein 546006 10297166 NAL212_0662 Nitrosomonas sp. AL212 outer membrane efflux protein YP_004293762.1 544579 R 153948 CDS YP_004293763.1 325981361 10297167 complement(546134..546508) 1 NC_015222.1 KEGG: nmu:Nmul_A2105 hypothetical protein; hypothetical protein 546508 10297167 NAL212_0663 Nitrosomonas sp. AL212 hypothetical protein YP_004293763.1 546134 R 153948 CDS YP_004293764.1 325981362 10297168 complement(546619..547218) 1 NC_015222.1 TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: nmu:Nmul_A1068 maf protein; PFAM: Maf-like protein; Septum formation protein Maf 547218 10297168 NAL212_0664 Nitrosomonas sp. AL212 Septum formation protein Maf YP_004293764.1 546619 R 153948 CDS YP_004293765.1 325981363 10297169 547275..547790 1 NC_015222.1 PFAM: Protein of unknown function DUF177; KEGG: net:Neut_0473 hypothetical protein; hypothetical protein 547790 10297169 NAL212_0665 Nitrosomonas sp. AL212 hypothetical protein YP_004293765.1 547275 D 153948 CDS YP_004293766.1 325981364 10297170 547809..547988 1 NC_015222.1 KEGG: neu:NE1644 50S ribosomal protein L32; TIGRFAM: Ribosomal protein L32p; PFAM: Ribosomal protein L32p; 50S ribosomal protein L32 547988 10297170 NAL212_0666 Nitrosomonas sp. AL212 50S ribosomal protein L32 YP_004293766.1 547809 D 153948 CDS YP_004293767.1 325981365 10297171 548050..549090 1 NC_015222.1 TIGRFAM: Phospholipid biosynthesis protein, PlsX-like; HAMAP: Phospholipid biosynthesis protein, PlsX-like; KEGG: nmu:Nmul_A1071 putative glycerol-3-phosphate acyltransferase PlsX; PFAM: Fatty acid synthesis PlsX protein; phosphate acyltransferase 549090 10297171 NAL212_0667 Nitrosomonas sp. AL212 phosphate acyltransferase YP_004293767.1 548050 D 153948 CDS YP_004293768.1 325981366 10297172 549087..550046 1 NC_015222.1 TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: nmu:Nmul_A1072 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-ACP synthase III 550046 10297172 NAL212_0668 Nitrosomonas sp. AL212 3-oxoacyl-ACP synthase III YP_004293768.1 549087 D 153948 CDS YP_004293769.1 325981367 10297173 550049..550993 1 NC_015222.1 KEGG: nmu:Nmul_A1073 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; manually curated; TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; SMART: Polyketide synthase, acyl transferase domain; malonyl CoA-acyl carrier protein transacylase 550993 10297173 NAL212_0669 Nitrosomonas sp. AL212 malonyl CoA-acyl carrier protein transacylase YP_004293769.1 550049 D 153948 CDS YP_004293770.1 325981368 10297174 551028..551783 1 NC_015222.1 KEGG: nmu:Nmul_A1074 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; Mediator complex, subunit Med9; 3-oxoacyl-ACP reductase 551783 10297174 NAL212_0670 Nitrosomonas sp. AL212 3-oxoacyl-ACP reductase YP_004293770.1 551028 D 153948 CDS YP_004293771.1 325981369 10297175 551938..552180 1 NC_015222.1 KEGG: net:Neut_0467 acyl carrier protein; TIGRFAM: Acyl carrier protein (ACP); PFAM: Phosphopantetheine-binding; acyl carrier protein 552180 10297175 NAL212_0671 Nitrosomonas sp. AL212 acyl carrier protein YP_004293771.1 551938 D 153948 CDS YP_004293772.1 325981370 10297176 552216..553457 1 NC_015222.1 SMART: Polyketide synthase, beta-ketoacyl synthase domain; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: neu:NE1650 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; 3-oxoacyl-ACP synthase II 553457 10297176 NAL212_0672 Nitrosomonas sp. AL212 3-oxoacyl-ACP synthase II YP_004293772.1 552216 D 153948 CDS YP_004293773.1 325981371 10297177 553474..554469 1 NC_015222.1 KEGG: nmu:Nmul_A1077 aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family UPF0755; PFAM: Uncharacterised protein family UPF0755; aminodeoxychorismate lyase 554469 10297177 NAL212_0673 Nitrosomonas sp. AL212 aminodeoxychorismate lyase YP_004293773.1 553474 D 153948 CDS YP_004293774.1 325981372 10297178 554515..557097 1 NC_015222.1 KEGG: nmu:Nmul_A1764 dolichyl-phosphate beta-D-mannosyltransferase; PFAM: Glycosyl transferase, family 2; GtrA-like protein; dolichyl-phosphate beta-D-mannosyltransferase 557097 10297178 NAL212_0674 Nitrosomonas sp. AL212 dolichyl-phosphate beta-D-mannosyltransferase YP_004293774.1 554515 D 153948 CDS YP_004293775.1 325981373 10297179 complement(557214..558248) 1 NC_015222.1 PFAM: O-methyltransferase, family 2; KEGG: nhl:Nhal_1752 O-methyltransferase family 2; O-methyltransferase family 2 558248 10297179 NAL212_0675 Nitrosomonas sp. AL212 O-methyltransferase family 2 YP_004293775.1 557214 R 153948 CDS YP_004293776.1 325981374 10297180 complement(558315..558818) 1 NC_015222.1 PFAM: Polyketide cyclase/dehydrase; KEGG: nhl:Nhal_1751 hypothetical protein; polyketide cyclase/dehydrase 558818 10297180 NAL212_0676 Nitrosomonas sp. AL212 polyketide cyclase/dehydrase YP_004293776.1 558315 R 153948 CDS YP_004293777.1 325981375 10297181 complement(558994..560532) 1 NC_015222.1 manually curated; TIGRFAM: Flagellin assembly, membrane protein MviN; KEGG: nmu:Nmul_A1036 integral membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN; integral membrane protein MviN 560532 10297181 NAL212_0677 Nitrosomonas sp. AL212 integral membrane protein MviN YP_004293777.1 558994 R 153948 CDS YP_004293778.1 325981376 10297182 complement(560638..561363) 1 NC_015222.1 KEGG: ptm:GSPATT00024162001 hypothetical protein; hypothetical protein 561363 10297182 NAL212_0678 Nitrosomonas sp. AL212 hypothetical protein YP_004293778.1 560638 R 153948 CDS YP_004293779.1 325981377 10297183 561530..561844 1 NC_015222.1 KEGG: pmy:Pmen_1553 hypothetical protein; hypothetical protein 561844 10297183 NAL212_0679 Nitrosomonas sp. AL212 hypothetical protein YP_004293779.1 561530 D 153948 CDS YP_004293780.1 325981378 10297184 561855..562712 1 NC_015222.1 PFAM: Uncharacterised protein family UPF0276; KEGG: nhl:Nhal_2721 protein of unknown function DUF692; hypothetical protein 562712 10297184 NAL212_0680 Nitrosomonas sp. AL212 hypothetical protein YP_004293780.1 561855 D 153948 CDS YP_004293781.1 325981379 10297186 complement(563582..565537) 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Metal-dependent hydrolase HDOD; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain; KEGG: tmz:Tmz1t_3851 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain; response regulator receiver modulated diguanylate cyclase 565537 10297186 NAL212_0682 Nitrosomonas sp. AL212 response regulator receiver modulated diguanylate cyclase YP_004293781.1 563582 R 153948 CDS YP_004293782.1 325981380 10297187 complement(565736..568486) 1 NC_015222.1 KEGG: tmz:Tmz1t_3847 Hpt sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; HAMP linker domain; multi-sensor hybrid histidine kinase 568486 10297187 NAL212_0683 Nitrosomonas sp. AL212 multi-sensor hybrid histidine kinase YP_004293782.1 565736 R 153948 CDS YP_004293783.1 325981381 10297188 complement(568486..569142) 1 NC_015222.1 KEGG: tmz:Tmz1t_3846 hypothetical protein; hypothetical protein 569142 10297188 NAL212_0684 Nitrosomonas sp. AL212 hypothetical protein YP_004293783.1 568486 R 153948 CDS YP_004293784.1 325981382 10297189 complement(569154..571088) 1 NC_015222.1 KEGG: tbd:Tbd_1266 TonB-dependent iron complex outermembrane receptor protein; manually curated; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; TonB-dependent receptor 571088 10297189 NAL212_0685 Nitrosomonas sp. AL212 TonB-dependent receptor YP_004293784.1 569154 R 153948 CDS YP_004293785.1 325981383 10297190 complement(571341..573197) 1 NC_015222.1 PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: neu:NE0376 ABC transporter permease/ATP-binding protein; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 573197 10297190 NAL212_0686 Nitrosomonas sp. AL212 xenobiotic-transporting ATPase YP_004293785.1 571341 R 153948 CDS YP_004293786.1 325981384 10297191 complement(573204..574445) 1 NC_015222.1 KEGG: noc:Noc_0536 pheromone shutdown protein; TIGRFAM: Pheromone shutdown, TraB; PFAM: Pheromone shutdown-related, TraB; TraB family protein 574445 10297191 NAL212_0687 Nitrosomonas sp. AL212 TraB family protein YP_004293786.1 573204 R 153948 CDS YP_004293787.1 325981385 10297192 574484..575128 1 NC_015222.1 KEGG: sno:Snov_2952 hypothetical protein; hypothetical protein 575128 10297192 NAL212_0688 Nitrosomonas sp. AL212 hypothetical protein YP_004293787.1 574484 D 153948 CDS YP_004293788.1 325981386 10297193 575636..576172 1 NC_015222.1 KEGG: neu:NE2056 hypothetical protein; manually curated; PFAM: YkuD domain; ErfK/YbiS/YcfS/YnhG family protein 576172 10297193 NAL212_0689 Nitrosomonas sp. AL212 ErfK/YbiS/YcfS/YnhG family protein YP_004293788.1 575636 D 153948 CDS YP_004293789.1 325981387 10297194 576443..576733 1 NC_015222.1 KEGG: neu:NE1907 hypothetical protein; hypothetical protein 576733 10297194 NAL212_0690 Nitrosomonas sp. AL212 hypothetical protein YP_004293789.1 576443 D 153948 CDS YP_004293790.1 325981388 10297195 complement(576830..577825) 1 NC_015222.1 PFAM: YkuD domain; KEGG: neu:NE1659 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 577825 10297195 NAL212_0691 Nitrosomonas sp. AL212 ErfK/YbiS/YcfS/YnhG family protein YP_004293790.1 576830 R 153948 CDS YP_004293791.1 325981389 10297196 578417..579622 1 NC_015222.1 PFAM: Porin, Gram-negative type; KEGG: nmu:Nmul_A2561 porin; porin 579622 10297196 NAL212_0692 Nitrosomonas sp. AL212 porin YP_004293791.1 578417 D 153948 CDS YP_004293792.1 325981390 10297197 579738..580184 1 NC_015222.1 KEGG: neu:NE0369 hypothetical protein; hypothetical protein 580184 10297197 NAL212_0693 Nitrosomonas sp. AL212 hypothetical protein YP_004293792.1 579738 D 153948 CDS YP_004293793.1 325981391 10297198 580274..580771 1 NC_015222.1 PFAM: Protein of unknown function DUF2806; KEGG: nmu:Nmul_A0795 hypothetical protein; hypothetical protein 580771 10297198 NAL212_0694 Nitrosomonas sp. AL212 hypothetical protein YP_004293793.1 580274 D 153948 CDS YP_004293794.1 325981392 10297199 complement(580755..582026) 1 NC_015222.1 KEGG: net:Neut_2458 hydroxypyruvate reductase; PFAM: MOFRL domain; hydroxypyruvate reductase 582026 10297199 NAL212_0695 Nitrosomonas sp. AL212 hydroxypyruvate reductase YP_004293794.1 580755 R 153948 CDS YP_004293795.1 325981393 10297200 complement(582023..584842) 1 NC_015222.1 KEGG: nmu:Nmul_A2229 excinuclease ABC, A subunit; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like; excinuclease ABC subunit A 584842 10297200 NAL212_0696 Nitrosomonas sp. AL212 excinuclease ABC subunit A YP_004293795.1 582023 R 153948 CDS YP_004293796.1 325981394 10297201 584909..586291 1 NC_015222.1 PFAM: Major facilitator superfamily MFS-1; KEGG: net:Neut_2460 major facilitator transporter; major facilitator superfamily protein 586291 10297201 NAL212_0697 Nitrosomonas sp. AL212 major facilitator superfamily protein YP_004293796.1 584909 D 153948 CDS YP_004293797.1 325981395 10297202 586292..586744 1 NC_015222.1 KEGG: nmu:Nmul_A2227 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding; single-strand binding protein 586744 10297202 NAL212_0698 Nitrosomonas sp. AL212 single-strand binding protein YP_004293797.1 586292 D 153948 CDS YP_004293798.1 325981396 10297203 complement(586880..587086) 1 NC_015222.1 hypothetical protein 587086 10297203 NAL212_0699 Nitrosomonas sp. AL212 hypothetical protein YP_004293798.1 586880 R 153948 CDS YP_004293799.1 325981397 10297204 complement(587264..588403) 1 NC_015222.1 KEGG: app:CAP2UW1_1594 pyridine nucleotide-disulfide oxidoreductase family protein; TIGRFAM: Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Pyridine nucleotide-disulfide oxidoreductase family protein 588403 10297204 NAL212_0700 Nitrosomonas sp. AL212 Pyridine nucleotide-disulfide oxidoreductase family protein YP_004293799.1 587264 R 153948 CDS YP_004293800.1 325981398 10297205 588619..589131 1 NC_015222.1 PFAM: Peptidoglycan binding-like; KEGG: neu:NE2133 peptidoglycan binding domain-containing protein; peptidoglycan-binding domain 1 protein 589131 10297205 NAL212_0701 Nitrosomonas sp. AL212 peptidoglycan-binding domain 1 protein YP_004293800.1 588619 D 153948 CDS YP_004293801.1 325981399 10297206 589731..590849 1 NC_015222.1 TIGRFAM: Hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Domain of unknown function DUF3463; Radical SAM; KEGG: nmu:Nmul_A2560 radical SAM family protein; SMART: Elongator protein 3/MiaB/NifB; hopanoid biosynthesis associated radical SAM protein HpnH 590849 10297206 NAL212_0702 Nitrosomonas sp. AL212 hopanoid biosynthesis associated radical SAM protein HpnH YP_004293801.1 589731 D 153948 CDS YP_004293802.1 325981400 10297207 590897..592036 1 NC_015222.1 PFAM: Glycosyl transferase, family 2; KEGG: neu:NE0330 glycosyl transferase family protein; family 2 glycosyl transferase 592036 10297207 NAL212_0703 Nitrosomonas sp. AL212 family 2 glycosyl transferase YP_004293802.1 590897 D 153948 CDS YP_004293803.1 325981401 10297208 592065..592649 1 NC_015222.1 KEGG: neu:NE0331 putative periplasmic transport protein; TIGRFAM: Hopanoid biosynthesis-associated membrane protein HpnM; PFAM: Toluene tolerance Ttg2; hopanoid biosynthesis associated membrane protein HpnM 592649 10297208 NAL212_0704 Nitrosomonas sp. AL212 hopanoid biosynthesis associated membrane protein HpnM YP_004293803.1 592065 D 153948 CDS YP_004293804.1 325981402 10297209 592688..595354 1 NC_015222.1 TIGRFAM: Hopanoid biosynthesis associated RND transporter-like protein HpnN; KEGG: nmu:Nmul_A2558 hypothetical protein; hopanoid biosynthesis associated RND transporter like protein HpnN 595354 10297209 NAL212_0705 Nitrosomonas sp. AL212 hopanoid biosynthesis associated RND transporter like protein HpnN YP_004293804.1 592688 D 153948 CDS YP_004293805.1 325981403 10297210 complement(595362..596633) 1 NC_015222.1 PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; KEGG: nmu:Nmul_A2620 Fmu (Sun) NOL1/Nop2p; Fmu (Sun) domain-containing protein 596633 10297210 NAL212_0706 Nitrosomonas sp. AL212 Fmu (Sun) domain-containing protein YP_004293805.1 595362 R 153948 CDS YP_004293806.1 325981404 10297211 complement(596674..597396) 1 NC_015222.1 PFAM: Protein of unknown function DUF3108; KEGG: neu:NE0086 hypothetical protein; hypothetical protein 597396 10297211 NAL212_0707 Nitrosomonas sp. AL212 hypothetical protein YP_004293806.1 596674 R 153948 CDS YP_004293807.1 325981405 10297212 complement(597393..598031) 1 NC_015222.1 TIGRFAM: Phosphoribosylglycinamide formyltransferase; KEGG: nmu:Nmul_A2618 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal; phosphoribosylglycinamide formyltransferase 598031 10297212 NAL212_0708 Nitrosomonas sp. AL212 phosphoribosylglycinamide formyltransferase YP_004293807.1 597393 R 153948 CDS YP_004293808.1 325981406 10297213 complement(598051..599109) 1 NC_015222.1 TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; KEGG: nmu:Nmul_A2617 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; phosphoribosylformylglycinamidine cyclo-ligase 599109 10297213 NAL212_0709 Nitrosomonas sp. AL212 phosphoribosylformylglycinamidine cyclo-ligase YP_004293808.1 598051 R 153948 CDS YP_004293809.1 325981407 10297214 599680..600894 1 NC_015222.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: sde:Sde_0100 deacylase-like; succinylglutamate desuccinylase/aspartoacylase 600894 10297214 NAL212_0710 Nitrosomonas sp. AL212 succinylglutamate desuccinylase/aspartoacylase YP_004293809.1 599680 D 153948 CDS YP_004293810.1 325981408 10297215 601283..601447 1 NC_015222.1 hypothetical protein 601447 10297215 NAL212_0711 Nitrosomonas sp. AL212 hypothetical protein YP_004293810.1 601283 D 153948 CDS YP_004293811.1 325981409 10297216 601401..602789 1 NC_015222.1 KEGG: mca:MCA0809 acetylornithine aminotransferase, putative; PFAM: Aminotransferase class-III; Acetylornithine transaminase 602789 10297216 NAL212_0712 Nitrosomonas sp. AL212 Acetylornithine transaminase YP_004293811.1 601401 D 153948 CDS YP_004293812.1 325981410 10297217 602800..603864 1 NC_015222.1 PFAM: Uncharacterised protein family UPF0118; KEGG: neu:NE0089 hypothetical protein; hypothetical protein 603864 10297217 NAL212_0713 Nitrosomonas sp. AL212 hypothetical protein YP_004293812.1 602800 D 153948 CDS YP_004293813.1 325981411 10297218 603900..604577 1 NC_015222.1 KEGG: nmu:Nmul_A2616 DnaA regulatory inactivator Hda; TIGRFAM: Chromosomal replication control, regulator Hda; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); DnaA regulatory inactivator Hda 604577 10297218 NAL212_0714 Nitrosomonas sp. AL212 DnaA regulatory inactivator Hda YP_004293813.1 603900 D 153948 CDS YP_004293814.1 325981412 10297219 604574..605236 1 NC_015222.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: neu:NE0097 HAD family hydrolase; HAD-superfamily hydrolase 605236 10297219 NAL212_0715 Nitrosomonas sp. AL212 HAD-superfamily hydrolase YP_004293814.1 604574 D 153948 CDS YP_004293815.1 325981413 10297220 complement(605233..606738) 1 NC_015222.1 TIGRFAM: Lysyl-tRNA synthetase, class II; KEGG: neu:NE2355 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; lysyl-tRNA synthetase 606738 10297220 NAL212_0716 Nitrosomonas sp. AL212 lysyl-tRNA synthetase YP_004293815.1 605233 R 153948 CDS YP_004293816.1 325981414 10297221 607124..607801 1 NC_015222.1 KEGG: sus:Acid_1755 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; two component transcriptional regulator, LuxR family 607801 10297221 NAL212_0717 Nitrosomonas sp. AL212 two component transcriptional regulator, LuxR family YP_004293816.1 607124 D 153948 CDS YP_004293817.1 325981415 10297222 608424..610268 1 NC_015222.1 KEGG: nde:NIDE3511 putative multicopper oxidase, type 2; PFAM: Multicopper oxidase, type 2; bilirubin oxidase 610268 10297222 NAL212_0718 Nitrosomonas sp. AL212 bilirubin oxidase YP_004293817.1 608424 D 153948 CDS YP_004293818.1 325981416 10297223 610290..610979 1 NC_015222.1 PFAM: Copper chaperone SCO1/SenC; KEGG: pfo:Pfl01_2002 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 610979 10297223 NAL212_0719 Nitrosomonas sp. AL212 electron transport protein SCO1/SenC YP_004293818.1 610290 D 153948 CDS YP_004293819.1 325981417 10297224 611130..612509 1 NC_015222.1 KEGG: lch:Lcho_3668 fibronectin type III domain-containing protein; fibronectin type III domain-containing protein 612509 10297224 NAL212_0720 Nitrosomonas sp. AL212 fibronectin type III domain-containing protein YP_004293819.1 611130 D 153948 CDS YP_004293820.1 325981418 10297225 complement(612629..613864) 1 NC_015222.1 SMART: Diguanylate cyclase, predicted; HAMP linker domain; GAF; TIGRFAM: Diguanylate cyclase, predicted; KEGG: tau:Tola_1191 diguanylate cyclase with GAF sensor; PFAM: Diguanylate cyclase, predicted; HAMP linker domain; GAF; GAF sensor-containing diguanylate cyclase 613864 10297225 NAL212_0721 Nitrosomonas sp. AL212 GAF sensor-containing diguanylate cyclase YP_004293820.1 612629 R 153948 CDS YP_004293821.1 325981419 10297226 614073..614525 1 NC_015222.1 PFAM: Phosphotransferase system, fructose subfamily IIA component; KEGG: mmb:Mmol_2160 PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA 614525 10297226 NAL212_0722 Nitrosomonas sp. AL212 PTS system fructose subfamily transporter subunit IIA YP_004293821.1 614073 D 153948 CDS YP_004293822.1 325981420 10297227 614515..614784 1 NC_015222.1 KEGG: nmu:Nmul_A0219 HPrNtr; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; PFAM: Phosphotransferase system, phosphocarrier HPr protein; phosphotransferase system, phosphocarrier protein HPr 614784 10297227 NAL212_0723 Nitrosomonas sp. AL212 phosphotransferase system, phosphocarrier protein HPr YP_004293822.1 614515 D 153948 CDS YP_004293823.1 325981421 10297228 614781..616508 1 NC_015222.1 TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; KEGG: nmu:Nmul_A0220 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile domain; phosphoenolpyruvate-protein phosphotransferase 616508 10297228 NAL212_0724 Nitrosomonas sp. AL212 phosphoenolpyruvate-protein phosphotransferase YP_004293823.1 614781 D 153948 CDS YP_004293824.1 325981422 10297229 616711..617838 1 NC_015222.1 TIGRFAM: Homoserine acetyltransferase; KEGG: nmu:Nmul_A0221 homoserine O-acetyltransferase; PFAM: Alpha/beta hydrolase fold-1; homoserine O-acetyltransferase 617838 10297229 NAL212_0725 Nitrosomonas sp. AL212 homoserine O-acetyltransferase YP_004293824.1 616711 D 153948 CDS YP_004293825.1 325981423 10297230 617847..618482 1 NC_015222.1 KEGG: nmu:Nmul_A0222 methionine biosynthesis MetW; TIGRFAM: Methionine biosynthesis MetW; PFAM: Methionine biosynthesis MetW; methionine biosynthesis protein MetW 618482 10297230 NAL212_0726 Nitrosomonas sp. AL212 methionine biosynthesis protein MetW YP_004293825.1 617847 D 153948 CDS YP_004293826.1 325981424 10297231 618488..619054 1 NC_015222.1 PFAM: Plasmid pRiA4b ORF-3-like; KEGG: kol:Kole_0088 plasmid pRiA4b ORF-3 family protein; plasmid pRiA4b ORF-3 family protein 619054 10297231 NAL212_0727 Nitrosomonas sp. AL212 plasmid pRiA4b ORF-3 family protein YP_004293826.1 618488 D 153948 CDS YP_004293827.1 325981425 10297232 complement(619098..619904) 1 NC_015222.1 PFAM: Protein of unknown function DUF455; KEGG: nhl:Nhal_2779 protein of unknown function DUF455; hypothetical protein 619904 10297232 NAL212_0728 Nitrosomonas sp. AL212 hypothetical protein YP_004293827.1 619098 R 153948 CDS YP_004293828.1 325981426 10297233 620011..620433 1 NC_015222.1 PFAM: Thioesterase superfamily; KEGG: nmu:Nmul_A0096 thioesterase superfamily protein; thioesterase superfamily protein 620433 10297233 NAL212_0729 Nitrosomonas sp. AL212 thioesterase superfamily protein YP_004293828.1 620011 D 153948 CDS YP_004293829.1 325981427 10297234 620559..621479 1 NC_015222.1 PFAM: Sulfotransferase domain; KEGG: hoh:Hoch_5094 sulfotransferase; sulfotransferase 621479 10297234 NAL212_0730 Nitrosomonas sp. AL212 sulfotransferase YP_004293829.1 620559 D 153948 CDS YP_004293830.1 325981428 10297235 621852..621980 1 NC_015222.1 hypothetical protein 621980 10297235 NAL212_0731 Nitrosomonas sp. AL212 hypothetical protein YP_004293830.1 621852 D 153948 CDS YP_004293831.1 325981429 10297236 complement(622235..623047) 1 NC_015222.1 KEGG: syf:Synpcc7942_0648 hypothetical protein; hypothetical protein 623047 10297236 NAL212_0732 Nitrosomonas sp. AL212 hypothetical protein YP_004293831.1 622235 R 153948 CDS YP_004293832.1 325981430 10297237 complement(623422..624102) 1 NC_015222.1 TIGRFAM: 6-phosphogluconolactonase, DevB-type; KEGG: net:Neut_0430 6-phosphogluconolactonase; 6-phosphogluconolactonase 624102 10297237 NAL212_0733 Nitrosomonas sp. AL212 6-phosphogluconolactonase YP_004293832.1 623422 R 153948 CDS YP_004293833.1 325981431 10297238 complement(624099..624755) 1 NC_015222.1 PFAM: Haloacid dehalogenase-like hydrolase; KEGG: nmu:Nmul_A0426 haloacid dehalogenase-like hydrolase; haloacid dehalogenase domain-containing protein hydrolase 624755 10297238 NAL212_0734 Nitrosomonas sp. AL212 haloacid dehalogenase domain-containing protein hydrolase YP_004293833.1 624099 R 153948 CDS YP_004293834.1 325981432 10297239 complement(624758..625696) 1 NC_015222.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: nmu:Nmul_A0427 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 625696 10297239 NAL212_0735 Nitrosomonas sp. AL212 NAD-dependent epimerase/dehydratase YP_004293834.1 624758 R 153948 CDS YP_004293835.1 325981433 10297240 complement(625696..626625) 1 NC_015222.1 KEGG: net:Neut_0433 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; phosphoglycerate dehydrogenase 626625 10297240 NAL212_0736 Nitrosomonas sp. AL212 phosphoglycerate dehydrogenase YP_004293835.1 625696 R 153948 CDS YP_004293836.1 325981434 10297241 complement(626622..627392) 1 NC_015222.1 KEGG: net:Neut_0434 2-dehydro-3-deoxyglucarate aldolase; PFAM: Aldehyde-lyase domain; 4-hydroxy-2-oxovalerate aldolase 627392 10297241 NAL212_0737 Nitrosomonas sp. AL212 4-hydroxy-2-oxovalerate aldolase YP_004293836.1 626622 R 153948 CDS YP_004293837.1 325981435 10297242 complement(627401..628153) 1 NC_015222.1 KEGG: neu:NE1686 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase; 3-deoxy-manno-octulosonate cytidylyltransferase 628153 10297242 NAL212_0738 Nitrosomonas sp. AL212 3-deoxy-manno-octulosonate cytidylyltransferase YP_004293837.1 627401 R 153948 CDS YP_004293838.1 325981436 10297243 628418..629683 1 NC_015222.1 KEGG: nmu:Nmul_A0431 hypothetical protein; hypothetical protein 629683 10297243 NAL212_0739 Nitrosomonas sp. AL212 hypothetical protein YP_004293838.1 628418 D 153948 CDS YP_004293839.1 325981437 10297244 629753..630517 1 NC_015222.1 KEGG: nmu:Nmul_A1173 methyltransferase FkbM; TIGRFAM: Methyltransferase FkbM; PFAM: Protein of unknown function Met10; FkbM family methyltransferase 630517 10297244 NAL212_0740 Nitrosomonas sp. AL212 FkbM family methyltransferase YP_004293839.1 629753 D 153948 CDS YP_004293840.1 325981438 10297245 630536..631564 1 NC_015222.1 PFAM: Glycosyl transferase, family 2; KEGG: nmu:Nmul_A0432 glycosyl transferase family protein; family 2 glycosyl transferase 631564 10297245 NAL212_0741 Nitrosomonas sp. AL212 family 2 glycosyl transferase YP_004293840.1 630536 D 153948 CDS YP_004293841.1 325981439 10297246 631585..632775 1 NC_015222.1 PFAM: O-antigen ligase-related; KEGG: nmu:Nmul_A0418 O-antigen polymerase; O-antigen polymerase 632775 10297246 NAL212_0742 Nitrosomonas sp. AL212 O-antigen polymerase YP_004293841.1 631585 D 153948 CDS YP_004293842.1 325981440 10297247 632898..633878 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: cyn:Cyan7425_5319 transposase IS4 family protein; transposase IS4 family protein 633878 10297247 NAL212_0743 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004293842.1 632898 D 153948 CDS YP_004293843.1 325981441 10297248 633971..634960 1 NC_015222.1 PFAM: Methyltransferase type 11; KEGG: gme:Gmet_2177 ubiquinone/menaquinone biosynthesis methylase-like protein; type 11 methyltransferase 634960 10297248 NAL212_0744 Nitrosomonas sp. AL212 type 11 methyltransferase YP_004293843.1 633971 D 153948 CDS YP_004293844.1 325981442 10297249 634989..635672 1 NC_015222.1 PFAM: O-methyltransferase, family 3; KEGG: nmu:Nmul_A0939 O-methyltransferase family protein; O-methyltransferase family protein 635672 10297249 NAL212_0745 Nitrosomonas sp. AL212 O-methyltransferase family protein YP_004293844.1 634989 D 153948 CDS YP_004293845.1 325981443 10297250 635838..636092 1 NC_015222.1 PFAM: Protein of unknown function DUF2024; KEGG: nmu:Nmul_A2677 hypothetical protein; hypothetical protein 636092 10297250 NAL212_0746 Nitrosomonas sp. AL212 hypothetical protein YP_004293845.1 635838 D 153948 CDS YP_004293846.1 325981444 10297251 636198..636713 1 NC_015222.1 KEGG: neu:NE1679 hypothetical protein; hypothetical protein 636713 10297251 NAL212_0747 Nitrosomonas sp. AL212 hypothetical protein YP_004293846.1 636198 D 153948 CDS YP_004293847.1 325981445 10297252 636777..637121 1 NC_015222.1 PFAM: Arsenate reductase-like; KEGG: neu:NE1678 putative arsenate reductase; arsenate reductase-like protein 637121 10297252 NAL212_0748 Nitrosomonas sp. AL212 arsenate reductase-like protein YP_004293847.1 636777 D 153948 CDS YP_004293848.1 325981446 10297253 complement(637216..637638) 1 NC_015222.1 KEGG: nmu:Nmul_A0572 50S ribosomal protein L19; TIGRFAM: Ribosomal protein L19; PFAM: Ribosomal protein L19; 50S ribosomal protein L19 637638 10297253 NAL212_0749 Nitrosomonas sp. AL212 50S ribosomal protein L19 YP_004293848.1 637216 R 153948 CDS YP_004293849.1 325981447 10297254 complement(637625..638431) 1 NC_015222.1 TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: nmu:Nmul_A0571 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 638431 10297254 NAL212_0750 Nitrosomonas sp. AL212 tRNA (guanine-N1)-methyltransferase YP_004293849.1 637625 R 153948 CDS YP_004293850.1 325981448 10297255 complement(638442..638945) 1 NC_015222.1 TIGRFAM: 16S rRNA processing protein RimM; HAMAP: 16S rRNA processing protein RimM; KEGG: nmu:Nmul_A0570 16S rRNA-processing protein RimM; PFAM: RimM protein; PRC-barrel; ribosome maturation factor rimM 638945 10297255 NAL212_0751 Nitrosomonas sp. AL212 ribosome maturation factor rimM YP_004293850.1 638442 R 153948 CDS YP_004293851.1 325981449 10297256 complement(638978..639244) 1 NC_015222.1 KEGG: net:Neut_0445 30S ribosomal protein S16; TIGRFAM: Ribosomal protein S16; PFAM: Ribosomal protein S16; 30S ribosomal protein S16 639244 10297256 NAL212_0752 Nitrosomonas sp. AL212 30S ribosomal protein S16 YP_004293851.1 638978 R 153948 CDS YP_004293852.1 325981450 10297257 639476..640771 1 NC_015222.1 KEGG: nmu:Nmul_A0339 hypothetical protein; manually curated; PFAM: Cysteine-rich domain; 4Fe-4S binding domain; hypothetical protein 640771 10297257 NAL212_0753 Nitrosomonas sp. AL212 hypothetical protein YP_004293852.1 639476 D 153948 CDS YP_004293853.1 325981451 10297258 640865..641491 1 NC_015222.1 PFAM: Ubiquinone biosynthesis-like protein; KEGG: nmu:Nmul_A0341 putative ubiquinone biosynthesis protein; Ubiquinone biosynthesis family protein 641491 10297258 NAL212_0754 Nitrosomonas sp. AL212 Ubiquinone biosynthesis family protein YP_004293853.1 640865 D 153948 CDS YP_004293854.1 325981452 10297259 641566..642129 1 NC_015222.1 PFAM: Protein of unknown function DUF179; KEGG: nmu:Nmul_A2478 hypothetical protein; hypothetical protein 642129 10297259 NAL212_0755 Nitrosomonas sp. AL212 hypothetical protein YP_004293854.1 641566 D 153948 CDS YP_004293855.1 325981453 10297260 642142..642627 1 NC_015222.1 TIGRFAM: Resolvase, holliday junction-type, YqgF-like; PFAM: Resolvase, holliday junction-type, YqgF-like; KEGG: net:Neut_0449 Holliday junction resolvase-like protein; SMART: Resolvase, RNase H-like fold; Holliday junction resolvase YqgF 642627 10297260 NAL212_0756 Nitrosomonas sp. AL212 Holliday junction resolvase YqgF YP_004293855.1 642142 D 153948 CDS YP_004293856.1 325981454 10297261 642608..643114 1 NC_015222.1 KEGG: net:Neut_0450 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; Uracil phosphoribosyltransferase 643114 10297261 NAL212_0757 Nitrosomonas sp. AL212 Uracil phosphoribosyltransferase YP_004293856.1 642608 D 153948 CDS YP_004293857.1 325981455 10297262 643111..644064 1 NC_015222.1 TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; KEGG: nmu:Nmul_A2481 aspartate carbamoyltransferase catalytic subunit; PFAM: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; aspartate carbamoyltransferase 644064 10297262 NAL212_0758 Nitrosomonas sp. AL212 aspartate carbamoyltransferase YP_004293857.1 643111 D 153948 CDS YP_004293858.1 325981456 10297263 644082..645356 1 NC_015222.1 KEGG: nmu:Nmul_A2482 dihydroorotase; TIGRFAM: Dihydroorotase; PFAM: Amidohydrolase 1; dihydroorotase, multifunctional complex type 645356 10297263 NAL212_0759 Nitrosomonas sp. AL212 dihydroorotase, multifunctional complex type YP_004293858.1 644082 D 153948 CDS YP_004293859.1 325981457 10297264 645424..647517 1 NC_015222.1 KEGG: neu:NE1663 M3 family peptidase; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; oligopeptidase A 647517 10297264 NAL212_0760 Nitrosomonas sp. AL212 oligopeptidase A YP_004293859.1 645424 D 153948 CDS YP_004293860.1 325981458 10297265 647750..648514 1 NC_015222.1 PFAM: VacJ-like lipoprotein; KEGG: net:Neut_1536 VacJ family lipoprotein; VacJ family lipoprotein 648514 10297265 NAL212_0761 Nitrosomonas sp. AL212 VacJ family lipoprotein YP_004293860.1 647750 D 153948 CDS YP_004293861.1 325981459 10297266 648879..650033 1 NC_015222.1 KEGG: nmu:Nmul_A0171 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; rubredoxin--NAD(+) reductase 650033 10297266 NAL212_0762 Nitrosomonas sp. AL212 rubredoxin--NAD(+) reductase YP_004293861.1 648879 D 153948 CDS YP_004293862.1 325981460 10297267 650115..650720 1 NC_015222.1 KEGG: neu:NE0055 intracellular septation protein A; TIGRFAM: Intracellular septation protein A; PFAM: Intracellular septation protein A; intracellular septation protein A 650720 10297267 NAL212_0763 Nitrosomonas sp. AL212 intracellular septation protein A YP_004293862.1 650115 D 153948 CDS YP_004293863.1 325981461 10297268 650717..651022 1 NC_015222.1 PFAM: YCII-related; KEGG: nmu:Nmul_A2112 YCII-related; hypothetical protein 651022 10297268 NAL212_0764 Nitrosomonas sp. AL212 hypothetical protein YP_004293863.1 650717 D 153948 CDS YP_004293864.1 325981462 10297269 651177..651971 1 NC_015222.1 PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: nmu:Nmul_A2114 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 651971 10297269 NAL212_0765 Nitrosomonas sp. AL212 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004293864.1 651177 D 153948 CDS YP_004293865.1 325981463 10297270 complement(652002..653084) 1 NC_015222.1 TIGRFAM: Alanine racemase; KEGG: nmu:Nmul_A2115 alanine racemase; PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; alanine racemase 653084 10297270 NAL212_0766 Nitrosomonas sp. AL212 alanine racemase YP_004293865.1 652002 R 153948 CDS YP_004293866.1 325981464 10297271 653301..654575 1 NC_015222.1 KEGG: nmu:Nmul_A2116 lysophospholipid transporter LplT; manually curated; PFAM: Major facilitator superfamily MFS-1; major facilitator superfamily protein 654575 10297271 NAL212_0767 Nitrosomonas sp. AL212 major facilitator superfamily protein YP_004293866.1 653301 D 153948 CDS YP_004293867.1 325981465 10297272 complement(654592..655347) 1 NC_015222.1 KEGG: neu:NE1398 putative DNA polymerase-related protein; TIGRFAM: Phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like; phage SPO1 DNA polymerase-like protein 655347 10297272 NAL212_0768 Nitrosomonas sp. AL212 phage SPO1 DNA polymerase-like protein YP_004293867.1 654592 R 153948 CDS YP_004293868.1 325981466 10297273 complement(655344..655814) 1 NC_015222.1 KEGG: neu:NE1399 GCN5-related N-acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; ribosomal-protein-alanine acetyltransferase 655814 10297273 NAL212_0769 Nitrosomonas sp. AL212 ribosomal-protein-alanine acetyltransferase YP_004293868.1 655344 R 153948 CDS YP_004293869.1 325981467 10297274 complement(655798..656472) 1 NC_015222.1 KEGG: nmu:Nmul_A2123 peptidase M22, glycoprotease; TIGRFAM: Conserved hypothetical protein CHP03725, YeaZ; PFAM: Peptidase M22, glycoprotease; hypothetical protein 656472 10297274 NAL212_0770 Nitrosomonas sp. AL212 hypothetical protein YP_004293869.1 655798 R 153948 CDS YP_004293870.1 325981468 10297275 complement(656554..657099) 1 NC_015222.1 manually curated; TIGRFAM: 2',5' RNA ligase; KEGG: nmu:Nmul_A2125 2',5' RNA ligase; PFAM: Phosphoesterase, HXTX; 2'-5' RNA ligase 657099 10297275 NAL212_0771 Nitrosomonas sp. AL212 2'-5' RNA ligase YP_004293870.1 656554 R 153948 CDS YP_004293871.1 325981469 10297276 complement(657096..657590) 1 NC_015222.1 TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; KEGG: nmu:Nmul_A2126 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 657590 10297276 NAL212_0772 Nitrosomonas sp. AL212 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_004293871.1 657096 R 153948 CDS YP_004293872.1 325981470 10297277 complement(657587..658291) 1 NC_015222.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; manually curated; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: nmu:Nmul_A2127 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 658291 10297277 NAL212_0773 Nitrosomonas sp. AL212 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_004293872.1 657587 R 153948 CDS YP_004293873.1 325981471 10297278 join(658507..658587,658589..659614) 1 NC_015222.1 KEGG: slt:Slit_1503 hypothetical protein; hypothetical protein 659614 10297278 NAL212_0774 Nitrosomonas sp. AL212 hypothetical protein YP_004293873.1 658507 D 153948 CDS YP_004293874.1 325981472 10297284 665385..666329 1 NC_015222.1 PFAM: Peptidase S49; KEGG: neu:NE1024 U7 family peptidase; peptidase S49 666329 10297284 NAL212_0775 Nitrosomonas sp. AL212 peptidase S49 YP_004293874.1 665385 D 153948 CDS YP_004293875.1 325981473 10297287 complement(667961..668434) 1 NC_015222.1 KEGG: neu:NE1553 transposase; transposase 668434 10297287 NAL212_0778 Nitrosomonas sp. AL212 transposase YP_004293875.1 667961 R 153948 CDS YP_004293876.1 325981474 10297289 complement(669872..671179) 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase; transposase IS4 family protein 671179 10297289 NAL212_0780 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004293876.1 669872 R 153948 CDS YP_004293877.1 325981475 10297291 complement(671864..672244) 1 NC_015222.1 KEGG: nha:Nham_4014 ISSpo6, transposase orf A; ISSpo6, transposase orf A 672244 10297291 NAL212_0782 Nitrosomonas sp. AL212 ISSpo6, transposase orf A YP_004293877.1 671864 R 153948 CDS YP_004293878.1 325981476 10297292 complement(672475..673386) 1 NC_015222.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: meh:M301_1164 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 673386 10297292 NAL212_0783 Nitrosomonas sp. AL212 dTDP-4-dehydrorhamnose reductase YP_004293878.1 672475 R 153948 CDS YP_004293879.1 325981477 10297293 complement(673386..674441) 1 NC_015222.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: pol:Bpro_4022 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase 674441 10297293 NAL212_0784 Nitrosomonas sp. AL212 dTDP-glucose 4,6-dehydratase YP_004293879.1 673386 R 153948 CDS YP_004293880.1 325981478 10297294 complement(674533..675885) 1 NC_015222.1 TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal; PFAM: tRNA(Ile)-lysidine/2-thiocytidine synthase; Lysidine-tRNA(Ile) synthetase, substrate-binding domain; Lysidine-tRNA(Ile) synthetase, C-terminal; KEGG: nmu:Nmul_A1809 hypothetical protein; SMART: Lysidine-tRNA(Ile) synthetase, C-terminal; tRNA(Ile)-lysidine synthetase 675885 10297294 NAL212_0785 Nitrosomonas sp. AL212 tRNA(Ile)-lysidine synthetase YP_004293880.1 674533 R 153948 CDS YP_004293881.1 325981479 10297295 complement(675854..676822) 1 NC_015222.1 TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; KEGG: neu:NE1021 acetyl-CoA carboxylase carboxyltransferase subunit alpha; PFAM: Acetyl-CoA carboxylase, alpha subunit; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 676822 10297295 NAL212_0786 Nitrosomonas sp. AL212 acetyl-CoA carboxylase, carboxyl transferase subunit alpha YP_004293881.1 675854 R 153948 CDS YP_004293882.1 325981480 10297296 677101..677625 1 NC_015222.1 TIGRFAM: Methionine sulphoxide reductase B; KEGG: app:CAP2UW1_3719 methionine-R-sulfoxide reductase; PFAM: Methionine sulphoxide reductase B; methionine-R-sulfoxide reductase 677625 10297296 NAL212_0787 Nitrosomonas sp. AL212 methionine-R-sulfoxide reductase YP_004293882.1 677101 D 153948 CDS YP_004293883.1 325981481 10297297 677630..678283 1 NC_015222.1 TIGRFAM: Peptide methionine sulphoxide reductase MsrA; KEGG: nhl:Nhal_3184 peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA; peptide methionine sulfoxide reductase 678283 10297297 NAL212_0788 Nitrosomonas sp. AL212 peptide methionine sulfoxide reductase YP_004293883.1 677630 D 153948 CDS YP_004293884.1 325981482 10297298 678303..679412 1 NC_015222.1 KEGG: nmu:Nmul_A1143 cupin region; PFAM: Cupin, JmjC-type; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase; hypothetical protein 679412 10297298 NAL212_0789 Nitrosomonas sp. AL212 hypothetical protein YP_004293884.1 678303 D 153948 CDS YP_004293885.1 325981483 10297299 679634..680941 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase; transposase IS4 family protein 680941 10297299 NAL212_0790 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004293885.1 679634 D 153948 CDS YP_004293886.1 325981484 10297300 681266..683032 1 NC_015222.1 SMART: Peptidase, metallopeptidase; KEGG: psb:Psyr_3983 serralysin; peptidase metallopeptidase 683032 10297300 NAL212_0791 Nitrosomonas sp. AL212 peptidase metallopeptidase YP_004293886.1 681266 D 153948 CDS YP_004293887.1 325981485 10297301 683190..684725 1 NC_015222.1 KEGG: pst:PSPTO_3193 metalloprotease, putative; PFAM: Peptidase M10, metallopeptidase; SMART: Peptidase, metallopeptidase; peptidase M10A and M12B matrixin and adamalysin 684725 10297301 NAL212_0792 Nitrosomonas sp. AL212 peptidase M10A and M12B matrixin and adamalysin YP_004293887.1 683190 D 153948 CDS YP_004293888.1 325981486 10297302 complement(684868..686034) 1 NC_015222.1 PFAM: (Uracil-5)-methyltransferase; KEGG: neu:NE1857 SAM-binding motif-containing protein; (uracil-5)-methyltransferase 686034 10297302 NAL212_0793 Nitrosomonas sp. AL212 (uracil-5)-methyltransferase YP_004293888.1 684868 R 153948 CDS YP_004293889.1 325981487 10297303 686068..686535 1 NC_015222.1 TIGRFAM: Methionine sulphoxide reductase B; KEGG: bcy:Bcer98_3954 bifunctional methionine sulfoxide reductase A/B protein; PFAM: Methionine sulphoxide reductase B; methionine-R-sulfoxide reductase 686535 10297303 NAL212_0794 Nitrosomonas sp. AL212 methionine-R-sulfoxide reductase YP_004293889.1 686068 D 153948 CDS YP_004293890.1 325981488 10297304 686544..687959 1 NC_015222.1 KEGG: neu:NE0601 Na+/H+ antiporter NhaC; TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like; Na+/H+ antiporter NhaC 687959 10297304 NAL212_0795 Nitrosomonas sp. AL212 Na+/H+ antiporter NhaC YP_004293890.1 686544 D 153948 CDS YP_004293891.1 325981489 10297305 688076..688291 1 NC_015222.1 KEGG: mru:mru_0760 hypothetical protein; hypothetical protein 688291 10297305 NAL212_0796 Nitrosomonas sp. AL212 hypothetical protein YP_004293891.1 688076 D 153948 CDS YP_004293892.1 325981490 10297306 688637..689446 1 NC_015222.1 KEGG: nmu:Nmul_A2766 ammonia monooxygenase/methane monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; methane monooxygenase/ammonia monooxygenase subunit C 689446 10297306 NAL212_0797 Nitrosomonas sp. AL212 methane monooxygenase/ammonia monooxygenase subunit C YP_004293892.1 688637 D 153948 CDS YP_004293893.1 325981491 10297307 689621..690445 1 NC_015222.1 KEGG: nmu:Nmul_A2765 ammonia monooxygenase; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; methane monooxygenase/ammonia monooxygenase subunit A 690445 10297307 NAL212_0798 Nitrosomonas sp. AL212 methane monooxygenase/ammonia monooxygenase subunit A YP_004293893.1 689621 D 153948 CDS YP_004293894.1 325981492 10297308 690445..691707 1 NC_015222.1 KEGG: nmu:Nmul_A2764 monooxygenase subunit B protein; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; methane monooxygenase/ammonia monooxygenase subunit B 691707 10297308 NAL212_0799 Nitrosomonas sp. AL212 methane monooxygenase/ammonia monooxygenase subunit B YP_004293894.1 690445 D 153948 CDS YP_004293895.1 325981493 10297309 691868..692455 1 NC_015222.1 KEGG: nmu:Nmul_A1398 hypothetical protein; hypothetical protein 692455 10297309 NAL212_0800 Nitrosomonas sp. AL212 hypothetical protein YP_004293895.1 691868 D 153948 CDS YP_004293896.1 325981494 10297310 692523..693092 1 NC_015222.1 KEGG: nmu:Nmul_A2762 hypothetical protein; hypothetical protein 693092 10297310 NAL212_0801 Nitrosomonas sp. AL212 hypothetical protein YP_004293896.1 692523 D 153948 CDS YP_004293897.1 325981495 10297311 693219..693620 1 NC_015222.1 PFAM: Copper resistance protein CopC, core; KEGG: neu:NE2059 putative copper export proteins; copper resistance protein CopC 693620 10297311 NAL212_0802 Nitrosomonas sp. AL212 copper resistance protein CopC YP_004293897.1 693219 D 153948 CDS YP_004293898.1 325981496 10297312 693634..695643 1 NC_015222.1 PFAM: Copper resistance D; Cytochrome c, class I; Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: nmu:Nmul_A2760 cytochrome c, class I; copper resistance D domain-containing protein 695643 10297312 NAL212_0803 Nitrosomonas sp. AL212 copper resistance D domain-containing protein YP_004293898.1 693634 D 153948 CDS YP_004293899.1 325981497 10297313 complement(696033..696242) 1 NC_015222.1 PFAM: Heavy metal transport/detoxification protein; KEGG: pmu:PM1891 hypothetical protein; heavy metal transport/detoxification protein 696242 10297313 NAL212_0804 Nitrosomonas sp. AL212 heavy metal transport/detoxification protein YP_004293899.1 696033 R 153948 CDS YP_004293900.1 325981498 10297315 complement(696538..697167) 1 NC_015222.1 KEGG: xcv:XCV1523 outer membrane lipoprotein; hypothetical protein 697167 10297315 NAL212_0806 Nitrosomonas sp. AL212 hypothetical protein YP_004293900.1 696538 R 153948 CDS YP_004293901.1 325981499 10297316 complement(697299..698078) 1 NC_015222.1 KEGG: net:Neut_1915 sec-independent protein translocase, TatC subunit; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase subunit TatC 698078 10297316 NAL212_0807 Nitrosomonas sp. AL212 Sec-independent protein translocase subunit TatC YP_004293901.1 697299 R 153948 CDS YP_004293902.1 325981500 10297317 complement(698123..698518) 1 NC_015222.1 KEGG: dar:Daro_3374 sec-independent protein translocase TatB; TIGRFAM: Twin-arginine translocation protein TatB; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106; twin-arginine translocation protein subunit TatB 698518 10297317 NAL212_0808 Nitrosomonas sp. AL212 twin-arginine translocation protein subunit TatB YP_004293902.1 698123 R 153948 CDS YP_004293903.1 325981501 10297318 complement(698598..698927) 1 NC_015222.1 KEGG: neu:NE0639 twin arginine translocase protein A; TIGRFAM: Twin-arginine translocation protein TatA/E; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106; twin-arginine translocation protein, TatA/E family subunit 698927 10297318 NAL212_0809 Nitrosomonas sp. AL212 twin-arginine translocation protein, TatA/E family subunit YP_004293903.1 698598 R 153948 CDS YP_004293904.1 325981502 10297319 complement(698960..699310) 1 NC_015222.1 KEGG: nmu:Nmul_A0811 histidine triad (HIT) protein; histidine triad (HIT) protein 699310 10297319 NAL212_0810 Nitrosomonas sp. AL212 histidine triad (HIT) protein YP_004293904.1 698960 R 153948 CDS YP_004293905.1 325981503 10297320 complement(699316..699642) 1 NC_015222.1 KEGG: neu:NE0641 phosphoribosyl-ATP pyrophosphatase; TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; phosphoribosyl-ATP diphosphatase 699642 10297320 NAL212_0811 Nitrosomonas sp. AL212 phosphoribosyl-ATP diphosphatase YP_004293905.1 699316 R 153948 CDS YP_004293906.1 325981504 10297321 complement(699639..700031) 1 NC_015222.1 KEGG: nmu:Nmul_A0813 phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 700031 10297321 NAL212_0812 Nitrosomonas sp. AL212 phosphoribosyl-AMP cyclohydrolase YP_004293906.1 699639 R 153948 CDS YP_004293907.1 325981505 10297322 complement(700083..700856) 1 NC_015222.1 TIGRFAM: Histidine biosynthesis, HisF; KEGG: nmu:Nmul_A0814 imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis; Imidazole glycerol phosphate synthase cyclase subunit 700856 10297322 NAL212_0813 Nitrosomonas sp. AL212 Imidazole glycerol phosphate synthase cyclase subunit YP_004293907.1 700083 R 153948 CDS YP_004293908.1 325981506 10297323 complement(700925..701680) 1 NC_015222.1 TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA; KEGG: mfa:Mfla_0253 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: Histidine biosynthesis; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 701680 10297323 NAL212_0814 Nitrosomonas sp. AL212 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_004293908.1 700925 R 153948 CDS YP_004293909.1 325981507 10297324 complement(701735..702379) 1 NC_015222.1 KEGG: nmu:Nmul_A0816 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; PFAM: Glutamine amidotransferase class-I, C-terminal; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 702379 10297324 NAL212_0815 Nitrosomonas sp. AL212 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_004293909.1 701735 R 153948 CDS YP_004293910.1 325981508 10297325 complement(702410..702997) 1 NC_015222.1 KEGG: gca:Galf_0434 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 702997 10297325 NAL212_0816 Nitrosomonas sp. AL212 imidazoleglycerol-phosphate dehydratase YP_004293910.1 702410 R 153948 CDS YP_004293911.1 325981509 10297326 complement(703039..704124) 1 NC_015222.1 TIGRFAM: Histidinol-phosphate aminotransferase; KEGG: nmu:Nmul_A0818 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/classII; histidinol-phosphate aminotransferase 704124 10297326 NAL212_0817 Nitrosomonas sp. AL212 histidinol-phosphate aminotransferase YP_004293911.1 703039 R 153948 CDS YP_004293912.1 325981510 10297327 complement(704400..705587) 1 NC_015222.1 PFAM: Protein of unknown function DUF185; KEGG: nmu:Nmul_A0337 hypothetical protein; hypothetical protein 705587 10297327 NAL212_0818 Nitrosomonas sp. AL212 hypothetical protein YP_004293912.1 704400 R 153948 CDS YP_004293913.1 325981511 10297328 705652..706392 1 NC_015222.1 KEGG: nmu:Nmul_A0336 pteridine reductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 706392 10297328 NAL212_0819 Nitrosomonas sp. AL212 3-oxoacyl-ACP reductase YP_004293913.1 705652 D 153948 CDS YP_004293914.1 325981512 10297329 706727..707269 1 NC_015222.1 PFAM: Chorismate--pyruvate lyase; manually curated; HAMAP: Chorismate--pyruvate lyase; KEGG: nmu:Nmul_A2612 chorismate lyase; chorismate--pyruvate lyase 707269 10297329 NAL212_0820 Nitrosomonas sp. AL212 chorismate--pyruvate lyase YP_004293914.1 706727 D 153948 CDS YP_004293915.1 325981513 10297330 707266..708135 1 NC_015222.1 TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; HAMAP: 4-hydroxybenzoate polyprenyl transferase; KEGG: neu:NE1838 4-hydroxybenzoate octaprenyltransferase; PFAM: UbiA prenyltransferase; 4-hydroxybenzoate octaprenyltransferase 708135 10297330 NAL212_0821 Nitrosomonas sp. AL212 4-hydroxybenzoate octaprenyltransferase YP_004293915.1 707266 D 153948 CDS YP_004293916.1 325981514 10297331 708145..709608 1 NC_015222.1 KEGG: nmu:Nmul_A2610 carboxylyase-like protein; TIGRFAM: Carboxylyase-related; PFAM: Carboxylyase-related; UbiD family decarboxylase 709608 10297331 NAL212_0822 Nitrosomonas sp. AL212 UbiD family decarboxylase YP_004293916.1 708145 D 153948 CDS YP_004293917.1 325981515 10297332 709580..709954 1 NC_015222.1 PFAM: Protein of unknown function DUF486; KEGG: net:Neut_0429 hypothetical protein; hypothetical protein 709954 10297332 NAL212_0823 Nitrosomonas sp. AL212 hypothetical protein YP_004293917.1 709580 D 153948 CDS YP_004293918.1 325981516 10297333 710153..712369 1 NC_015222.1 PFAM: Organic solvent tolerance protein, C-terminal; Organic solvent tolerance-like, N-terminal; KEGG: net:Neut_1216 organic solvent tolerance protein; organic solvent tolerance protein 712369 10297333 NAL212_0824 Nitrosomonas sp. AL212 organic solvent tolerance protein YP_004293918.1 710153 D 153948 CDS YP_004293919.1 325981517 10297334 712415..713740 1 NC_015222.1 PFAM: SurA N-terminal; Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: nmu:Nmul_A0520 PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain 713740 10297334 NAL212_0825 Nitrosomonas sp. AL212 SurA domain YP_004293919.1 712415 D 153948 CDS YP_004293920.1 325981518 10297335 713737..714747 1 NC_015222.1 TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; KEGG: nmu:Nmul_A0519 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 714747 10297335 NAL212_0826 Nitrosomonas sp. AL212 4-hydroxythreonine-4-phosphate dehydrogenase YP_004293920.1 713737 D 153948 CDS YP_004293921.1 325981519 10297336 714737..715501 1 NC_015222.1 TIGRFAM: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine methylase transferase; KEGG: nmu:Nmul_A0518 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase, N-terminal; dimethyladenosine transferase 715501 10297336 NAL212_0827 Nitrosomonas sp. AL212 dimethyladenosine transferase YP_004293921.1 714737 D 153948 CDS YP_004293922.1 325981520 10297337 715615..716877 1 NC_015222.1 KEGG: lpf:lpl0095 hypothetical protein; hypothetical protein 716877 10297337 NAL212_0828 Nitrosomonas sp. AL212 hypothetical protein YP_004293922.1 715615 D 153948 CDS YP_004293923.1 325981521 10297342 complement(719638..720963) 1 NC_015222.1 KEGG: hse:Hsero_2417 subtilisin-like serine protease; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; subtilisin 720963 10297342 NAL212_0833 Nitrosomonas sp. AL212 subtilisin YP_004293923.1 719638 R 153948 CDS YP_004293924.1 325981522 10297343 complement(720976..721686) 1 NC_015222.1 KEGG: xop:PXO_00213 hypothetical protein; hypothetical protein 721686 10297343 NAL212_0834 Nitrosomonas sp. AL212 hypothetical protein YP_004293924.1 720976 R 153948 CDS YP_004293925.1 325981523 10297344 complement(721690..722271) 1 NC_015222.1 KEGG: hse:Hsero_2419 RNA polymerase sigma-E factor protein; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 722271 10297344 NAL212_0835 Nitrosomonas sp. AL212 ECF subfamily RNA polymerase sigma-24 subunit YP_004293925.1 721690 R 153948 CDS YP_004293926.1 325981524 10297345 complement(722400..723137) 1 NC_015222.1 KEGG: gpb:HDN1F_36050 hypothetical protein; hypothetical protein 723137 10297345 NAL212_0836 Nitrosomonas sp. AL212 hypothetical protein YP_004293926.1 722400 R 153948 CDS YP_004293927.1 325981525 10297347 724512..725672 1 NC_015222.1 PFAM: Glycoside hydrolase, family 42, N-terminal; KEGG: nde:NIDE1370 hypothetical protein; glycoside hydrolase family protein 725672 10297347 NAL212_0837 Nitrosomonas sp. AL212 glycoside hydrolase family protein YP_004293927.1 724512 D 153948 CDS YP_004293928.1 325981526 10297348 726381..726692 1 NC_015222.1 KEGG: saf:SULAZ_0652 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 726692 10297348 NAL212_0838 Nitrosomonas sp. AL212 nitrogen regulatory protein P-II YP_004293928.1 726381 D 153948 CDS YP_004293929.1 325981527 10297349 complement(726924..727007) 1 NC_015222.1 manually curated; hypothetical protein 727007 10297349 NAL212_0839 Nitrosomonas sp. AL212 hypothetical protein YP_004293929.1 726924 R 153948 CDS YP_004293930.1 325981528 10297351 728315..730441 1 NC_015222.1 KEGG: mar:MAE_06890 BNR repeat-containing glycosyl hydrolase; hypothetical protein 730441 10297351 NAL212_0841 Nitrosomonas sp. AL212 hypothetical protein YP_004293930.1 728315 D 153948 CDS YP_004293931.1 325981529 10297352 complement(730554..732605) 1 NC_015222.1 TIGRFAM: PAS; PFAM: CHASE; ATPase-like, ATP-binding domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: hch:HCH_00809 signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; PAC motif; multi-sensor signal transduction histidine kinase 732605 10297352 NAL212_0842 Nitrosomonas sp. AL212 multi-sensor signal transduction histidine kinase YP_004293931.1 730554 R 153948 CDS YP_004293932.1 325981530 10297353 733094..733957 1 NC_015222.1 KEGG: gca:Galf_2077 metal dependent phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; SMART: Metal-dependent phosphohydrolase, HD domain; metal dependent phosphohydrolase 733957 10297353 NAL212_0843 Nitrosomonas sp. AL212 metal dependent phosphohydrolase YP_004293932.1 733094 D 153948 CDS YP_004293933.1 325981531 10297354 complement(734193..735662) 1 NC_015222.1 KEGG: rxy:Rxyl_3110 sulfatase; PFAM: Sulfatase; N-acetylglucosamine-6-sulfatase 735662 10297354 NAL212_0844 Nitrosomonas sp. AL212 N-acetylglucosamine-6-sulfatase YP_004293933.1 734193 R 153948 CDS YP_004293934.1 325981532 10297355 complement(735766..736107) 1 NC_015222.1 KEGG: tpr:Tpau_2513 ABC drug efflux pump, inner membrane subunit, DrrB family; multidrug ABC transporter permease 736107 10297355 NAL212_0845 Nitrosomonas sp. AL212 multidrug ABC transporter permease YP_004293934.1 735766 R 153948 CDS YP_004293935.1 325981533 10297356 736254..737426 1 NC_015222.1 PFAM: Protein of unknown function DUF839; WD40-like Beta Propeller; KEGG: sna:Snas_5802 hypothetical protein; hypothetical protein 737426 10297356 NAL212_0846 Nitrosomonas sp. AL212 hypothetical protein YP_004293935.1 736254 D 153948 CDS YP_004293936.1 325981534 10297357 complement(738091..738246) 1 NC_015222.1 KEGG: fnu:FN1252 34 kDa membrane antigen precursor; membrane protein 738246 10297357 NAL212_0847 Nitrosomonas sp. AL212 membrane protein YP_004293936.1 738091 R 153948 CDS YP_004293937.1 325981535 10297358 complement(738458..739681) 1 NC_015222.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: neu:NE1900 hypothetical protein; hypothetical protein 739681 10297358 NAL212_0848 Nitrosomonas sp. AL212 hypothetical protein YP_004293937.1 738458 R 153948 CDS YP_004293938.1 325981536 10297359 complement(739678..740430) 1 NC_015222.1 PFAM: ABC transporter-like; KEGG: neu:NE1899 ABC transporter ATPase; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 740430 10297359 NAL212_0849 Nitrosomonas sp. AL212 phosphonate-transporting ATPase YP_004293938.1 739678 R 153948 CDS YP_004293939.1 325981537 10297360 complement(740430..741575) 1 NC_015222.1 KEGG: neu:NE1898 hypothetical protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 741575 10297360 NAL212_0850 Nitrosomonas sp. AL212 RND family efflux transporter MFP subunit YP_004293939.1 740430 R 153948 CDS YP_004293940.1 325981538 10297361 complement(741677..743191) 1 NC_015222.1 PFAM: Peptidase M48; KEGG: nmu:Nmul_A2537 peptidase M48, Ste24p; peptidase M48 Ste24p 743191 10297361 NAL212_0851 Nitrosomonas sp. AL212 peptidase M48 Ste24p YP_004293940.1 741677 R 153948 CDS YP_004293941.1 325981539 10297362 complement(743233..744864) 1 NC_015222.1 KEGG: nmu:Nmul_A2535 NAD+ synthetase; TIGRFAM: NAD synthase; PFAM: NAD/GMP synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthetase 744864 10297362 NAL212_0852 Nitrosomonas sp. AL212 NAD+ synthetase YP_004293941.1 743233 R 153948 CDS YP_004293942.1 325981540 10297363 complement(744889..746265) 1 NC_015222.1 PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; KEGG: net:Neut_2007 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 746265 10297363 NAL212_0853 Nitrosomonas sp. AL212 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_004293942.1 744889 R 153948 CDS YP_004293943.1 325981541 10297364 complement(746373..746576) 1 NC_015222.1 KEGG: nmu:Nmul_A1061 hypothetical protein; hypothetical protein 746576 10297364 NAL212_0854 Nitrosomonas sp. AL212 hypothetical protein YP_004293943.1 746373 R 153948 CDS YP_004293944.1 325981542 10297365 complement(746602..747522) 1 NC_015222.1 TIGRFAM: Branched-chain amino acid aminotransferase I; KEGG: nmu:Nmul_A1060 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV; branched-chain amino acid aminotransferase 747522 10297365 NAL212_0855 Nitrosomonas sp. AL212 branched-chain amino acid aminotransferase YP_004293944.1 746602 R 153948 CDS YP_004293945.1 325981543 10297366 complement(747839..748159) 1 NC_015222.1 KEGG: pfl:PFL_4147 putative lipoprotein; hypothetical protein 748159 10297366 NAL212_0856 Nitrosomonas sp. AL212 hypothetical protein YP_004293945.1 747839 R 153948 CDS YP_004293946.1 325981544 10297367 748593..748766 1 NC_015222.1 KEGG: fno:Fnod_0931 hypothetical protein; hypothetical protein 748766 10297367 NAL212_0857 Nitrosomonas sp. AL212 hypothetical protein YP_004293946.1 748593 D 153948 CDS YP_004293947.1 325981545 10297368 749309..750652 1 NC_015222.1 PFAM: Sulphate transporter; KEGG: tgr:Tgr7_1442 sulphate transporter; sulfate transporter 750652 10297368 NAL212_0858 Nitrosomonas sp. AL212 sulfate transporter YP_004293947.1 749309 D 153948 CDS YP_004293948.1 325981546 10297369 750748..751155 1 NC_015222.1 PFAM: UspA; KEGG: app:CAP2UW1_1381 UspA domain protein; UspA domain-containing protein 751155 10297369 NAL212_0859 Nitrosomonas sp. AL212 UspA domain-containing protein YP_004293948.1 750748 D 153948 CDS YP_004293949.1 325981547 10297370 751210..751422 1 NC_015222.1 KEGG: zin:ZICARI_039 putative cytochrome bo terminal oxidase subunit I/cytochrome bo terminal oxidase subunit III fusion protein; hypothetical protein 751422 10297370 NAL212_0860 Nitrosomonas sp. AL212 hypothetical protein YP_004293949.1 751210 D 153948 CDS YP_004293950.1 325981548 10297371 752115..753275 1 NC_015222.1 KEGG: nde:NIDE1370 hypothetical protein; hypothetical protein 753275 10297371 NAL212_0861 Nitrosomonas sp. AL212 hypothetical protein YP_004293950.1 752115 D 153948 CDS YP_004293951.1 325981549 10297372 complement(753389..754057) 1 NC_015222.1 manually curated; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; KEGG: nmu:Nmul_A0728 two component LuxR family transcriptional regulator; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; two component transcriptional regulator, LuxR family 754057 10297372 NAL212_0862 Nitrosomonas sp. AL212 two component transcriptional regulator, LuxR family YP_004293951.1 753389 R 153948 CDS YP_004293952.1 325981550 10297373 complement(754047..756164) 1 NC_015222.1 KEGG: nmu:Nmul_A0727 putative signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; integral membrane sensor signal transduction histidine kinase 756164 10297373 NAL212_0863 Nitrosomonas sp. AL212 integral membrane sensor signal transduction histidine kinase YP_004293952.1 754047 R 153948 CDS YP_004293953.1 325981551 10297374 756457..757311 1 NC_015222.1 KEGG: pub:SAR11_0063 type II secretion; hypothetical protein 757311 10297374 NAL212_0864 Nitrosomonas sp. AL212 hypothetical protein YP_004293953.1 756457 D 153948 CDS YP_004293954.1 325981552 10297375 757543..758775 1 NC_015222.1 PFAM: Peroxiredoxin, OsmC-like protein; Peptidase S9, prolyl oligopeptidase, catalytic domain; KEGG: alv:Alvin_1830 OsmC family protein; OsmC family protein 758775 10297375 NAL212_0865 Nitrosomonas sp. AL212 OsmC family protein YP_004293954.1 757543 D 153948 CDS YP_004293955.1 325981553 10297376 758782..759186 1 NC_015222.1 KEGG: slt:Slit_2540 RNA-binding S4 domain protein; PFAM: RNA-binding S4; SMART: RNA-binding S4; RNA-binding S4 domain-containing protein 759186 10297376 NAL212_0866 Nitrosomonas sp. AL212 RNA-binding S4 domain-containing protein YP_004293955.1 758782 D 153948 CDS YP_004293956.1 325981554 10297377 759204..759989 1 NC_015222.1 PFAM: Class II aldolase/adducin, N-terminal; KEGG: neu:NE0048 class II aldolase/adducin domain protein; class II aldolase/adducin family protein 759989 10297377 NAL212_0867 Nitrosomonas sp. AL212 class II aldolase/adducin family protein YP_004293956.1 759204 D 153948 CDS YP_004293957.1 325981555 10297378 760334..761527 1 NC_015222.1 TIGRFAM: Uncharacterised protein family HDIG; PFAM: Protein of unknown function DUF3391; Metal-dependent phosphohydrolase, HD subdomain; KEGG: slt:Slit_1975 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD domain; metal dependent phosphohydrolase 761527 10297378 NAL212_0868 Nitrosomonas sp. AL212 metal dependent phosphohydrolase YP_004293957.1 760334 D 153948 CDS YP_004293958.1 325981556 10297379 complement(761542..763869) 1 NC_015222.1 KEGG: neu:NE1918 von Willebrand factor type A domain-containing protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor type A 763869 10297379 NAL212_0869 Nitrosomonas sp. AL212 von Willebrand factor type A YP_004293958.1 761542 R 153948 CDS YP_004293959.1 325981557 10297380 complement(763931..764737) 1 NC_015222.1 KEGG: neu:NE1919 nitric oxide reductase NorQ protein; nitric oxide reductase NorQ protein 764737 10297380 NAL212_0870 Nitrosomonas sp. AL212 nitric oxide reductase NorQ protein YP_004293959.1 763931 R 153948 CDS YP_004293960.1 325981558 10297381 complement(764845..765201) 1 NC_015222.1 PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: slt:Slit_0986 ribulose-bisphosphate carboxylase; SMART: Ribulose bisphosphate carboxylase, small chain; ribulose-bisphosphate carboxylase 765201 10297381 NAL212_0871 Nitrosomonas sp. AL212 ribulose-bisphosphate carboxylase YP_004293960.1 764845 R 153948 CDS YP_004293961.1 325981559 10297382 complement(765280..766701) 1 NC_015222.1 KEGG: slt:Slit_0985 ribulose-bisphosphate carboxylase; PFAM: Ribulose bisphosphate carboxylase, large subunit, C-terminal; Ribulose bisphosphate carboxylase, large subunit, N-terminal; ribulose-bisphosphate carboxylase 766701 10297382 NAL212_0872 Nitrosomonas sp. AL212 ribulose-bisphosphate carboxylase YP_004293961.1 765280 R 153948 CDS YP_004293962.1 325981560 10297383 766909..767826 1 NC_015222.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nmu:Nmul_A0687 LysR family transcriptional regulator; LysR family transcriptional regulator 767826 10297383 NAL212_0873 Nitrosomonas sp. AL212 LysR family transcriptional regulator YP_004293962.1 766909 D 153948 CDS YP_004293963.1 325981561 10297384 767942..768613 1 NC_015222.1 KEGG: ppr:PBPRB1928 hypothetical protein; hypothetical protein 768613 10297384 NAL212_0874 Nitrosomonas sp. AL212 hypothetical protein YP_004293963.1 767942 D 153948 CDS YP_004293964.1 325981562 10297385 768655..768879 1 NC_015222.1 KEGG: sdn:Sden_3449 hypothetical protein; hypothetical protein 768879 10297385 NAL212_0875 Nitrosomonas sp. AL212 hypothetical protein YP_004293964.1 768655 D 153948 CDS YP_004293965.1 325981563 10297386 769035..770414 1 NC_015222.1 TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; PFAM: Radical SAM; Methylthiotransferase, N-terminal; KEGG: nmu:Nmul_A1979 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying enzyme YliG 770414 10297386 NAL212_0876 Nitrosomonas sp. AL212 MiaB-like tRNA modifying enzyme YliG YP_004293965.1 769035 D 153948 CDS YP_004293966.1 325981564 10297387 complement(770521..771480) 1 NC_015222.1 TIGRFAM: tRNA pseudouridine synthase II, TruB; HAMAP: tRNA pseudouridine synthase II, TruB; KEGG: nmu:Nmul_A1862 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II; tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal; tRNA pseudouridine synthase B 771480 10297387 NAL212_0877 Nitrosomonas sp. AL212 tRNA pseudouridine synthase B YP_004293966.1 770521 R 153948 CDS YP_004293967.1 325981565 10297388 complement(771522..771905) 1 NC_015222.1 KEGG: nmu:Nmul_A1863 ribosome-binding factor A; TIGRFAM: Ribosome-binding factor A; PFAM: Ribosome-binding factor A; ribosome-binding factor A 771905 10297388 NAL212_0878 Nitrosomonas sp. AL212 ribosome-binding factor A YP_004293967.1 771522 R 153948 CDS YP_004293968.1 325981566 10297389 complement(771937..774591) 1 NC_015222.1 KEGG: nmu:Nmul_A1864 translation initiation factor IF-2; TIGRFAM: Translation initiation factor aIF-2, bacterial-like; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Initiation factor 2 associated region, bacterial; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; Translation initiation factor IF- 2, domain 3; translation initiation factor IF-2 774591 10297389 NAL212_0879 Nitrosomonas sp. AL212 translation initiation factor IF-2 YP_004293968.1 771937 R 153948 CDS YP_004293969.1 325981567 10297390 complement(774680..776152) 1 NC_015222.1 TIGRFAM: Transcription termination factor NusA; Transcription termination factor NusA, C-terminal duplication; PFAM: Transcription factor NusA, N-terminal; Ribosomal protein S1, RNA-binding domain; KEGG: nmu:Nmul_A1865 transcription elongation factor NusA; SMART: RNA-binding domain, S1; K Homology; NusA antitermination factor 776152 10297390 NAL212_0880 Nitrosomonas sp. AL212 NusA antitermination factor YP_004293969.1 774680 R 153948 CDS YP_004293970.1 325981568 10297391 complement(776176..776643) 1 NC_015222.1 PFAM: Ribosome maturation factor RimP; KEGG: nmu:Nmul_A1866 hypothetical protein; hypothetical protein 776643 10297391 NAL212_0881 Nitrosomonas sp. AL212 hypothetical protein YP_004293970.1 776176 R 153948 CDS YP_004293971.1 325981569 10297392 776878..778848 1 NC_015222.1 TIGRFAM: Acetate-CoA ligase; KEGG: net:Neut_1690 acetyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; acetate/CoA ligase 778848 10297392 NAL212_0882 Nitrosomonas sp. AL212 acetate/CoA ligase YP_004293971.1 776878 D 153948 CDS YP_004293972.1 325981570 10297393 778888..779850 1 NC_015222.1 KEGG: nmu:Nmul_A1869 beta-lactamase-like; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 779850 10297393 NAL212_0883 Nitrosomonas sp. AL212 beta-lactamase domain-containing protein YP_004293972.1 778888 D 153948 CDS YP_004293973.1 325981571 10297394 complement(779966..780169) 1 NC_015222.1 KEGG: nml:Namu_0602 major facilitator superfamily MFS_1; hypothetical protein 780169 10297394 NAL212_0884 Nitrosomonas sp. AL212 hypothetical protein YP_004293973.1 779966 R 153948 CDS YP_004293974.1 325981572 10297395 complement(780270..780464) 1 NC_015222.1 KEGG: tmz:Tmz1t_0525 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 780464 10297395 NAL212_0885 Nitrosomonas sp. AL212 TRAP dicarboxylate transporter subunit DctM YP_004293974.1 780270 R 153948 CDS YP_004293975.1 325981573 10297397 781168..781695 1 NC_015222.1 PFAM: Lipocalin-like; KEGG: sbp:Sbal223_2844 lipocalin family protein; lipocalin family protein 781695 10297397 NAL212_0887 Nitrosomonas sp. AL212 lipocalin family protein YP_004293975.1 781168 D 153948 CDS YP_004293976.1 325981574 10297398 781725..781925 1 NC_015222.1 PFAM: Protein of unknown function DUF2905; KEGG: nmu:Nmul_A0975 hypothetical protein; hypothetical protein 781925 10297398 NAL212_0888 Nitrosomonas sp. AL212 hypothetical protein YP_004293976.1 781725 D 153948 CDS YP_004293977.1 325981575 10297400 complement(784635..785075) 1 NC_015222.1 PFAM: Protein of unknown function DUF2231, transmembrane; KEGG: neu:NE2151 hypothetical protein; hypothetical protein 785075 10297400 NAL212_0890 Nitrosomonas sp. AL212 hypothetical protein YP_004293977.1 784635 R 153948 CDS YP_004293978.1 325981576 10297401 complement(785096..785434) 1 NC_015222.1 KEGG: net:Neut_2100 hypothetical protein; hypothetical protein 785434 10297401 NAL212_0891 Nitrosomonas sp. AL212 hypothetical protein YP_004293978.1 785096 R 153948 CDS YP_004293979.1 325981577 10297402 785551..786195 1 NC_015222.1 KEGG: neu:NE2153 hypothetical protein; putative transcriptional regulator 786195 10297402 NAL212_0892 Nitrosomonas sp. AL212 putative transcriptional regulator YP_004293979.1 785551 D 153948 CDS YP_004293980.1 325981578 10297403 complement(786503..786853) 1 NC_015222.1 KEGG: neu:NE2461 hypothetical protein; hypothetical protein 786853 10297403 NAL212_0893 Nitrosomonas sp. AL212 hypothetical protein YP_004293980.1 786503 R 153948 CDS YP_004293981.1 325981579 10297404 787216..790305 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; MASE1; Diguanylate cyclase, predicted; PAS fold-3; KEGG: tgr:Tgr7_0245 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 790305 10297404 NAL212_0894 Nitrosomonas sp. AL212 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004293981.1 787216 D 153948 CDS YP_004293982.1 325981580 10297406 790854..791444 1 NC_015222.1 KEGG: net:Neut_0132 cytochrome P460 precursor; cytochrome P460 791444 10297406 NAL212_0896 Nitrosomonas sp. AL212 cytochrome P460 YP_004293982.1 790854 D 153948 CDS YP_004293983.1 325981581 10297407 complement(792243..792653) 1 NC_015222.1 KEGG: nhl:Nhal_2069 nitrosocyanin; TIGRFAM: Nitrosocyanin; PFAM: Cytochrome c oxidase subunit II C-terminal; nitrosocyanin 792653 10297407 NAL212_0897 Nitrosomonas sp. AL212 nitrosocyanin YP_004293983.1 792243 R 153948 CDS YP_004293984.1 325981582 10297409 complement(793675..794106) 1 NC_015222.1 KEGG: ptm:GSPATT00037909001 hypothetical protein; hypothetical protein 794106 10297409 NAL212_0899 Nitrosomonas sp. AL212 hypothetical protein YP_004293984.1 793675 R 153948 CDS YP_004293985.1 325981583 10297410 complement(794274..795332) 1 NC_015222.1 PFAM: Protein of unknown function DUF457, transmembrane; KEGG: neu:NE0299 hypothetical protein; hypothetical protein 795332 10297410 NAL212_0900 Nitrosomonas sp. AL212 hypothetical protein YP_004293985.1 794274 R 153948 CDS YP_004293986.1 325981584 10297411 complement(795345..796049) 1 NC_015222.1 PFAM: COQ9; Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: neu:NE0300 TetR family regulatory protein; COQ9 domain-containing protein 796049 10297411 NAL212_0901 Nitrosomonas sp. AL212 COQ9 domain-containing protein YP_004293986.1 795345 R 153948 CDS YP_004293987.1 325981585 10297412 796267..797103 1 NC_015222.1 PFAM: Rhamnosyl O-methyltransferase/Cephalosporin hydroxylase; KEGG: lby:Lbys_1319 hypothetical protein; cephalosporin hydroxylase 797103 10297412 NAL212_0902 Nitrosomonas sp. AL212 cephalosporin hydroxylase YP_004293987.1 796267 D 153948 CDS YP_004293988.1 325981586 10297413 797353..797790 1 NC_015222.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: ote:Oter_4155 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 797790 10297413 NAL212_0903 Nitrosomonas sp. AL212 GCN5-like N-acetyltransferase YP_004293988.1 797353 D 153948 CDS YP_004293989.1 325981587 10297414 798196..798804 1 NC_015222.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: neu:NE1171 MotA/TolQ/ExbB proton channel family protein; MotA/TolQ/ExbB proton channel 798804 10297414 NAL212_0904 Nitrosomonas sp. AL212 MotA/TolQ/ExbB proton channel YP_004293989.1 798196 D 153948 CDS YP_004293990.1 325981588 10297415 799197..800006 1 NC_015222.1 PFAM: VacJ-like lipoprotein; KEGG: nmu:Nmul_A2557 VacJ-like lipoprotein; VacJ family lipoprotein 800006 10297415 NAL212_0905 Nitrosomonas sp. AL212 VacJ family lipoprotein YP_004293990.1 799197 D 153948 CDS YP_004293991.1 325981589 10297416 800133..802130 1 NC_015222.1 TIGRFAM: Squalene cyclase; Hopene cyclase; KEGG: net:Neut_1507 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene/oxidosqualene cyclase 802130 10297416 NAL212_0906 Nitrosomonas sp. AL212 squalene/oxidosqualene cyclase YP_004293991.1 800133 D 153948 CDS YP_004293992.1 325981590 10297417 802127..802888 1 NC_015222.1 KEGG: nmu:Nmul_A2555 purine phosphorylase family protein 1; TIGRFAM: Hopanoid-associated phosphorylase HpnG; PFAM: Nucleoside phosphorylase domain; hopanoid-associated phosphorylase 802888 10297417 NAL212_0907 Nitrosomonas sp. AL212 hopanoid-associated phosphorylase YP_004293992.1 802127 D 153948 CDS YP_004293993.1 325981591 10297418 complement(802871..804643) 1 NC_015222.1 SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, ATP-binding/permease protein; KEGG: noc:Noc_2950 ABC efflux pump, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane domain; ABC transporter-like; lipid A ABC exporter family, fused ATPase and inner membrane subunits 804643 10297418 NAL212_0908 Nitrosomonas sp. AL212 lipid A ABC exporter family, fused ATPase and inner membrane subunits YP_004293993.1 802871 R 153948 CDS YP_004293994.1 325981592 10297419 complement(804997..806424) 1 NC_015222.1 KEGG: rde:RD1_1171 type I secretion target repeat-containing protein; type I secretion target repeat-containing protein 806424 10297419 NAL212_0909 Nitrosomonas sp. AL212 type I secretion target repeat-containing protein YP_004293994.1 804997 R 153948 CDS YP_004293995.1 325981593 10297420 complement(806662..807192) 1 NC_015222.1 PFAM: RTX toxin-activating protein C, bacteria; KEGG: btr:Btr_0686 hypothetical protein; RTX toxin-activating protein C 807192 10297420 NAL212_0910 Nitrosomonas sp. AL212 RTX toxin-activating protein C YP_004293995.1 806662 R 153948 CDS YP_004293996.1 325981594 10297421 complement(807231..807512) 1 NC_015222.1 PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: hch:HCH_04404 parvulin-like peptidyl-prolyl isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 807512 10297421 NAL212_0911 Nitrosomonas sp. AL212 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004293996.1 807231 R 153948 CDS YP_004293997.1 325981595 10297422 807808..808473 1 NC_015222.1 PFAM: ABC transporter-like; KEGG: nmu:Nmul_A0895 ABC transporter related; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase 808473 10297422 NAL212_0912 Nitrosomonas sp. AL212 Fe(3+)-transporting ATPase YP_004293997.1 807808 D 153948 CDS YP_004293998.1 325981596 10297423 808470..811019 1 NC_015222.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: nmu:Nmul_A0894 hypothetical protein; hypothetical protein 811019 10297423 NAL212_0913 Nitrosomonas sp. AL212 hypothetical protein YP_004293998.1 808470 D 153948 CDS YP_004293999.1 325981597 10297424 811019..812113 1 NC_015222.1 PFAM: Hydroxyneurosporene synthase; KEGG: nmu:Nmul_A0893 putative AttH; hydroxyneurosporene synthase 812113 10297424 NAL212_0914 Nitrosomonas sp. AL212 hydroxyneurosporene synthase YP_004293999.1 811019 D 153948 CDS YP_004294000.1 325981598 10297425 812433..812540 1 NC_015222.1 hypothetical protein 812540 10297425 NAL212_0915 Nitrosomonas sp. AL212 hypothetical protein YP_004294000.1 812433 D 153948 CDS YP_004294001.1 325981599 10297426 813110..814342 1 NC_015222.1 PFAM: Uncharacterised protein family UPF0118; KEGG: dma:DMR_30920 hypothetical membrane protein; hypothetical protein 814342 10297426 NAL212_0916 Nitrosomonas sp. AL212 hypothetical protein YP_004294001.1 813110 D 153948 CDS YP_004294002.1 325981600 10297427 814504..815136 1 NC_015222.1 PFAM: SNARE associated Golgi protein; KEGG: net:Neut_0941 DedA family protein; hypothetical protein 815136 10297427 NAL212_0917 Nitrosomonas sp. AL212 hypothetical protein YP_004294002.1 814504 D 153948 CDS YP_004294003.1 325981601 10297428 complement(815242..816807) 1 NC_015222.1 PFAM: Amino acid permease domain; KEGG: neu:NE0513 amino acid transporter; amino acid permease-associated protein 816807 10297428 NAL212_0918 Nitrosomonas sp. AL212 amino acid permease-associated protein YP_004294003.1 815242 R 153948 CDS YP_004294004.1 325981602 10297429 816857..817123 1 NC_015222.1 KEGG: pfh:PFHG_03656 conserved hypothetical protein; hypothetical protein 817123 10297429 NAL212_0919 Nitrosomonas sp. AL212 hypothetical protein YP_004294004.1 816857 D 153948 CDS YP_004294005.1 325981603 10297430 817249..817500 1 NC_015222.1 KEGG: alv:Alvin_3124 protein of unknown function DUF37; TIGRFAM: Protein of unknown function DUF37; PFAM: Protein of unknown function DUF37; hypothetical protein 817500 10297430 NAL212_0920 Nitrosomonas sp. AL212 hypothetical protein YP_004294005.1 817249 D 153948 CDS YP_004294006.1 325981604 10297432 complement(818670..819650) 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: atu:Atu4436 IS5 family transposase; transposase IS4 family protein 819650 10297432 NAL212_0922 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004294006.1 818670 R 153948 CDS YP_004294007.1 325981605 10297433 821240..821404 1 NC_015222.1 hypothetical protein 821404 10297433 NAL212_0923 Nitrosomonas sp. AL212 hypothetical protein YP_004294007.1 821240 D 153948 CDS YP_004294008.1 325981606 10297434 821430..821717 1 NC_015222.1 PFAM: Excinuclease ABC, C subunit, N-terminal; KEGG: cpc:Cpar_1954 excinuclease ABC C subunit domain protein; excinuclease ABC subunit C 821717 10297434 NAL212_0924 Nitrosomonas sp. AL212 excinuclease ABC subunit C YP_004294008.1 821430 D 153948 CDS YP_004294009.1 325981607 10297435 821714..822943 1 NC_015222.1 KEGG: mdo:100020428 hypothetical protein LOC100020428; hypothetical protein 822943 10297435 NAL212_0925 Nitrosomonas sp. AL212 hypothetical protein YP_004294009.1 821714 D 153948 CDS YP_004294010.1 325981608 10297436 822912..824315 1 NC_015222.1 PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: mba:Mbar_A1015 hypothetical protein; restriction modification system DNA specificity domain 824315 10297436 NAL212_0926 Nitrosomonas sp. AL212 restriction modification system DNA specificity domain YP_004294010.1 822912 D 153948 CDS YP_004294011.1 325981609 10297437 824308..824700 1 NC_015222.1 PFAM: Nucleotidyl transferase domain; KEGG: pin:Ping_0758 DNA polymerase beta subunit; DNA polymerase beta domain-containing protein 824700 10297437 NAL212_0927 Nitrosomonas sp. AL212 DNA polymerase beta domain-containing protein YP_004294011.1 824308 D 153948 CDS YP_004294012.1 325981610 10297438 824681..825121 1 NC_015222.1 PFAM: Protein of unknown function DUF86; KEGG: mmw:Mmwyl1_1312 hypothetical protein; hypothetical protein 825121 10297438 NAL212_0928 Nitrosomonas sp. AL212 hypothetical protein YP_004294012.1 824681 D 153948 CDS YP_004294013.1 325981611 10297439 825073..828384 1 NC_015222.1 KEGG: gur:Gura_1482 hypothetical protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal; Restriction endonuclease, type I, EcoRI, R subunit/Type III 828384 10297439 NAL212_0929 Nitrosomonas sp. AL212 Restriction endonuclease, type I, EcoRI, R subunit/Type III YP_004294013.1 825073 D 153948 CDS YP_004294014.1 325981612 10297440 complement(828503..829675) 1 NC_015222.1 KEGG: maq:Maqu_0077 ornithine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal; Ornithine decarboxylase 829675 10297440 NAL212_0930 Nitrosomonas sp. AL212 Ornithine decarboxylase YP_004294014.1 828503 R 153948 CDS YP_004294015.1 325981613 10297441 830330..830800 1 NC_015222.1 KEGG: eba:ebA3117 hypothetical protein; hypothetical protein 830800 10297441 NAL212_0931 Nitrosomonas sp. AL212 hypothetical protein YP_004294015.1 830330 D 153948 CDS YP_004294016.1 325981614 10297442 831176..832906 1 NC_015222.1 KEGG: chu:CHU_2249 pyruvate dehydrogenase (cytochrome); PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Pyruvate dehydrogenase (cytochrome) 832906 10297442 NAL212_0932 Nitrosomonas sp. AL212 Pyruvate dehydrogenase (cytochrome) YP_004294016.1 831176 D 153948 CDS YP_004294017.1 325981615 10297443 complement(832920..834047) 1 NC_015222.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: nmu:Nmul_A1960 ADP-ribosylation/crystallin J1; ADP-ribosylation/Crystallin J1 834047 10297443 NAL212_0933 Nitrosomonas sp. AL212 ADP-ribosylation/Crystallin J1 YP_004294017.1 832920 R 153948 CDS YP_004294018.1 325981616 10297446 complement(834757..836151) 1 NC_015222.1 TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; KEGG: nmu:Nmul_A1604 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl-tRNA synthetase 836151 10297446 NAL212_0934 Nitrosomonas sp. AL212 glutamyl-tRNA synthetase YP_004294018.1 834757 R 153948 CDS YP_004294019.1 325981617 10297447 836350..837924 1 NC_015222.1 TIGRFAM: Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated; KEGG: net:Neut_1417 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; acyl-CoA ligase 837924 10297447 NAL212_0935 Nitrosomonas sp. AL212 acyl-CoA ligase YP_004294019.1 836350 D 153948 CDS YP_004294020.1 325981618 10297448 837924..839159 1 NC_015222.1 TIGRFAM: Pyridoxal-dependent decarboxylase, exosortase system type 1 associated; KEGG: nmu:Nmul_A2669 Orn/DAP/Arg decarboxylase 2; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal; pyridoxal-dependent decarboxylase, exosortase system type 1 associated 839159 10297448 NAL212_0936 Nitrosomonas sp. AL212 pyridoxal-dependent decarboxylase, exosortase system type 1 associated YP_004294020.1 837924 D 153948 CDS YP_004294021.1 325981619 10297449 839560..840384 1 NC_015222.1 KEGG: nmu:Nmul_A1954 hypothetical protein; TIGRFAM: PEP-CTERM/exosortase system-associated acyltransferase, predicted; PFAM: Autoinducer synthesis protein; putative PEP-CTERM/exosortase system-associated acyltransferase 840384 10297449 NAL212_0937 Nitrosomonas sp. AL212 putative PEP-CTERM/exosortase system-associated acyltransferase YP_004294021.1 839560 D 153948 CDS YP_004294022.1 325981620 10297450 840418..840903 1 NC_015222.1 KEGG: nmu:Nmul_A1955 hypothetical protein; hypothetical protein 840903 10297450 NAL212_0938 Nitrosomonas sp. AL212 hypothetical protein YP_004294022.1 840418 D 153948 CDS YP_004294023.1 325981621 10297451 840872..842293 1 NC_015222.1 KEGG: nmu:Nmul_A1956 hypothetical protein; hypothetical protein 842293 10297451 NAL212_0939 Nitrosomonas sp. AL212 hypothetical protein YP_004294023.1 840872 D 153948 CDS YP_004294024.1 325981622 10297452 842306..845206 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold; Diguanylate cyclase, predicted; KEGG: net:Neut_1425 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 845206 10297452 NAL212_0940 Nitrosomonas sp. AL212 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004294024.1 842306 D 153948 CDS YP_004294025.1 325981623 10297453 845314..846330 1 NC_015222.1 PFAM: Ribonuclease T2; KEGG: nhl:Nhal_0810 ribonuclease T2; ribonuclease T2 846330 10297453 NAL212_0941 Nitrosomonas sp. AL212 ribonuclease T2 YP_004294025.1 845314 D 153948 CDS YP_004294026.1 325981624 10297454 846931..848844 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: gca:Galf_1102 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 848844 10297454 NAL212_0942 Nitrosomonas sp. AL212 diguanylate cyclase YP_004294026.1 846931 D 153948 CDS YP_004294027.1 325981625 10297455 complement(849137..850678) 1 NC_015222.1 manually curated; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; KEGG: nmu:Nmul_A2384 hypothetical protein; PFAM: YjeF-related protein, N-terminal; Uncharacterised protein family, carbohydrate kinase-related; YjeF-like protein 850678 10297455 NAL212_0943 Nitrosomonas sp. AL212 YjeF-like protein YP_004294027.1 849137 R 153948 CDS YP_004294028.1 325981626 10297456 850768..854754 1 NC_015222.1 KEGG: nmu:Nmul_A2383 phosphoribosylformylglycinamidine synthase; manually curated; TIGRFAM: Phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; HAMAP: Phosphoribosylformylglycinamidine synthase, bacterial; phosphoribosylformylglycinamidine synthase 854754 10297456 NAL212_0944 Nitrosomonas sp. AL212 phosphoribosylformylglycinamidine synthase YP_004294028.1 850768 D 153948 CDS YP_004294029.1 325981627 10297457 854795..856024 1 NC_015222.1 KEGG: nmu:Nmul_A2382 PDZ/DHR/GLGF; PFAM: Domain of unknown function DUF399; SMART: PDZ/DHR/GLGF; hypothetical protein 856024 10297457 NAL212_0945 Nitrosomonas sp. AL212 hypothetical protein YP_004294029.1 854795 D 153948 CDS YP_004294030.1 325981628 10297458 856038..858080 1 NC_015222.1 PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; KEGG: nmu:Nmul_A2381 peptidase M1, membrane alanine aminopeptidase; peptidase M1 membrane alanine aminopeptidase 858080 10297458 NAL212_0946 Nitrosomonas sp. AL212 peptidase M1 membrane alanine aminopeptidase YP_004294030.1 856038 D 153948 CDS YP_004294031.1 325981629 10297459 complement(858143..861304) 1 NC_015222.1 KEGG: nmu:Nmul_A1113 heavy metal efflux pump CzcA; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; CzcA family heavy metal efflux pump 861304 10297459 NAL212_0947 Nitrosomonas sp. AL212 CzcA family heavy metal efflux pump YP_004294031.1 858143 R 153948 CDS YP_004294032.1 325981630 10297460 complement(861307..862461) 1 NC_015222.1 KEGG: nmu:Nmul_A1112 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 862461 10297460 NAL212_0948 Nitrosomonas sp. AL212 RND family efflux transporter MFP subunit YP_004294032.1 861307 R 153948 CDS YP_004294033.1 325981631 10297461 complement(862458..863873) 1 NC_015222.1 PFAM: Outer membrane efflux protein; KEGG: net:Neut_1767 outer membrane efflux protein; outer membrane efflux protein 863873 10297461 NAL212_0949 Nitrosomonas sp. AL212 outer membrane efflux protein YP_004294033.1 862458 R 153948 CDS YP_004294034.1 325981632 10297462 864162..866264 1 NC_015222.1 KEGG: cja:CJA_3563 hypothetical protein; hypothetical protein 866264 10297462 NAL212_0950 Nitrosomonas sp. AL212 hypothetical protein YP_004294034.1 864162 D 153948 CDS YP_004294035.1 325981633 10297463 complement(866317..866709) 1 NC_015222.1 PFAM: Protein of unknown function DUF3579; KEGG: cvi:CV_1990 hypothetical protein; hypothetical protein 866709 10297463 NAL212_0951 Nitrosomonas sp. AL212 hypothetical protein YP_004294035.1 866317 R 153948 CDS YP_004294036.1 325981634 10297464 complement(866971..867612) 1 NC_015222.1 KEGG: app:CAP2UW1_0860 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif putative anchor domain-containing protein 867612 10297464 NAL212_0952 Nitrosomonas sp. AL212 PEP motif putative anchor domain-containing protein YP_004294036.1 866971 R 153948 CDS YP_004294037.1 325981635 10297465 complement(868167..869336) 1 NC_015222.1 TIGRFAM: Chorismate synthase; KEGG: net:Neut_1957 chorismate synthase; PFAM: Chorismate synthase; chorismate synthase 869336 10297465 NAL212_0953 Nitrosomonas sp. AL212 chorismate synthase YP_004294037.1 868167 R 153948 CDS YP_004294038.1 325981636 10297467 complement(869848..870048) 1 NC_015222.1 KEGG: nmu:Nmul_A1257 hypothetical protein; hypothetical protein 870048 10297467 NAL212_0955 Nitrosomonas sp. AL212 hypothetical protein YP_004294038.1 869848 R 153948 CDS YP_004294039.1 325981637 10297468 complement(870172..871086) 1 NC_015222.1 KEGG: nwa:Nwat_0101 hypothetical protein; hypothetical protein 871086 10297468 NAL212_0956 Nitrosomonas sp. AL212 hypothetical protein YP_004294039.1 870172 R 153948 CDS YP_004294040.1 325981638 10297470 872567..872779 1 NC_015222.1 KEGG: ehi:EHI_000260 RNA recognition motif domain containing protein; RNA recognition motif domain containing protein 872779 10297470 NAL212_0958 Nitrosomonas sp. AL212 RNA recognition motif domain containing protein YP_004294040.1 872567 D 153948 CDS YP_004294041.1 325981639 10297471 872943..873152 1 NC_015222.1 KEGG: dya:Dyak_GE20898 GE20898 gene product from transcript GE20898-RA; hypothetical protein 873152 10297471 NAL212_0959 Nitrosomonas sp. AL212 hypothetical protein YP_004294041.1 872943 D 153948 CDS YP_004294042.1 325981640 10297472 873242..873583 1 NC_015222.1 KEGG: lla:L84260 hypothetical protein; hypothetical protein 873583 10297472 NAL212_0960 Nitrosomonas sp. AL212 hypothetical protein YP_004294042.1 873242 D 153948 CDS YP_004294043.1 325981641 10297473 complement(873729..874580) 1 NC_015222.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: tbd:Tbd_2766 hypothetical protein; endonuclease/exonuclease/phosphatase 874580 10297473 NAL212_0961 Nitrosomonas sp. AL212 endonuclease/exonuclease/phosphatase YP_004294043.1 873729 R 153948 CDS YP_004294044.1 325981642 10297474 complement(874966..875589) 1 NC_015222.1 TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; C-type lectin; KEGG: dsa:Desal_1919 C-type lectin domain protein; SMART: C-type lectin; PEP motif putative anchor domain-containing protein 875589 10297474 NAL212_0962 Nitrosomonas sp. AL212 PEP motif putative anchor domain-containing protein YP_004294044.1 874966 R 153948 CDS YP_004294045.1 325981643 10297475 complement(876006..876707) 1 NC_015222.1 KEGG: nmu:Nmul_A0946 putative glutathione S-transferase; putative glutathione S-transferase 876707 10297475 NAL212_0963 Nitrosomonas sp. AL212 putative glutathione S-transferase YP_004294045.1 876006 R 153948 CDS YP_004294046.1 325981644 10297476 876843..877199 1 NC_015222.1 PFAM: Helix-turn-helix, HxlR type; KEGG: nmu:Nmul_A0947 putative transcriptional regulator; HxlR family transcriptional regulator 877199 10297476 NAL212_0964 Nitrosomonas sp. AL212 HxlR family transcriptional regulator YP_004294046.1 876843 D 153948 CDS YP_004294047.1 325981645 10297477 complement(877262..878635) 1 NC_015222.1 PFAM: Ammonium transporter; KEGG: nmu:Nmul_A0516 Rh-like protein/ammonium transporter; ammonium transporter 878635 10297477 NAL212_0965 Nitrosomonas sp. AL212 ammonium transporter YP_004294047.1 877262 R 153948 CDS YP_004294048.1 325981646 10297478 complement(878888..879502) 1 NC_015222.1 KEGG: nmi:NMO_1071 hypothetical protein; hypothetical protein 879502 10297478 NAL212_0966 Nitrosomonas sp. AL212 hypothetical protein YP_004294048.1 878888 R 153948 CDS YP_004294049.1 325981647 10297479 complement(879978..880484) 1 NC_015222.1 PFAM: Uncharacterised protein domain CNP1; KEGG: nmu:Nmul_A1844 putative lipoprotein; hypothetical protein 880484 10297479 NAL212_0967 Nitrosomonas sp. AL212 hypothetical protein YP_004294049.1 879978 R 153948 CDS YP_004294050.1 325981648 10297480 complement(880481..882463) 1 NC_015222.1 PFAM: Protein of unknown function DUF3501; Cysteine-rich domain; KEGG: nmu:Nmul_A1846 putative ferredoxin; hypothetical protein 882463 10297480 NAL212_0968 Nitrosomonas sp. AL212 hypothetical protein YP_004294050.1 880481 R 153948 CDS YP_004294051.1 325981649 10297481 complement(882575..882994) 1 NC_015222.1 PFAM: Rubrerythrin; KEGG: nmu:Nmul_A1847 rubrerythrin; rubrerythrin 882994 10297481 NAL212_0969 Nitrosomonas sp. AL212 rubrerythrin YP_004294051.1 882575 R 153948 CDS YP_004294052.1 325981650 10297482 883476..884621 1 NC_015222.1 KEGG: nmu:Nmul_A1922 major facilitator transporter; major facilitator transporter 884621 10297482 NAL212_0970 Nitrosomonas sp. AL212 major facilitator transporter YP_004294052.1 883476 D 153948 CDS YP_004294053.1 325981651 10297483 884702..886120 1 NC_015222.1 TIGRFAM: 3-isopropylmalate dehydratase, large subunit; KEGG: neu:NE0685 isopropylmalate isomerase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; 3-isopropylmalate dehydratase large subunit 886120 10297483 NAL212_0971 Nitrosomonas sp. AL212 3-isopropylmalate dehydratase large subunit YP_004294053.1 884702 D 153948 CDS YP_004294054.1 325981652 10297484 886181..886819 1 NC_015222.1 KEGG: nmu:Nmul_A1919 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; 3-isopropylmalate dehydratase small subunit 886819 10297484 NAL212_0972 Nitrosomonas sp. AL212 3-isopropylmalate dehydratase small subunit YP_004294054.1 886181 D 153948 CDS YP_004294055.1 325981653 10297485 886845..887906 1 NC_015222.1 TIGRFAM: Isopropylmalate dehydrogenase; KEGG: nmu:Nmul_A1918 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 887906 10297485 NAL212_0973 Nitrosomonas sp. AL212 3-isopropylmalate dehydrogenase YP_004294055.1 886845 D 153948 CDS YP_004294056.1 325981654 10297486 888057..889169 1 NC_015222.1 SMART: Semialdehyde dehydrogenase, NAD-binding; TIGRFAM: Aspartate-semialdehyde dehydrogenase, proteobacteria; KEGG: nmu:Nmul_A1917 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD-binding; aspartate-semialdehyde dehydrogenase 889169 10297486 NAL212_0974 Nitrosomonas sp. AL212 aspartate-semialdehyde dehydrogenase YP_004294056.1 888057 D 153948 CDS YP_004294057.1 325981655 10297487 889384..891912 1 NC_015222.1 TIGRFAM: Motility protein FimV, N-terminal; Motility protein FimV, C-terminal; KEGG: neu:NE0690 transmembrane protein; FimV N-terminal domain 891912 10297487 NAL212_0975 Nitrosomonas sp. AL212 FimV N-terminal domain YP_004294057.1 889384 D 153948 CDS YP_004294058.1 325981656 10297488 891956..892753 1 NC_015222.1 TIGRFAM: Pseudouridine synthase I, TruA; HAMAP: Pseudouridine synthase I, TruA; KEGG: nmu:Nmul_A1914 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; tRNA pseudouridine synthase A 892753 10297488 NAL212_0976 Nitrosomonas sp. AL212 tRNA pseudouridine synthase A YP_004294058.1 891956 D 153948 CDS YP_004294059.1 325981657 10297489 892780..893397 1 NC_015222.1 KEGG: nmu:Nmul_A1913 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); phosphoribosylanthranilate isomerase 893397 10297489 NAL212_0977 Nitrosomonas sp. AL212 phosphoribosylanthranilate isomerase YP_004294059.1 892780 D 153948 CDS YP_004294060.1 325981658 10297490 893394..894593 1 NC_015222.1 PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; TIGRFAM: Tryptophan synthase, beta chain; HAMAP: Tryptophan synthase beta chain/beta chain-like; KEGG: neu:NE0693 tryptophan synthase subunit beta; tryptophan synthase subunit beta 894593 10297490 NAL212_0978 Nitrosomonas sp. AL212 tryptophan synthase subunit beta YP_004294060.1 893394 D 153948 CDS YP_004294061.1 325981659 10297491 894800..895663 1 NC_015222.1 TIGRFAM: Tryptophan synthase, alpha chain; KEGG: nmu:Nmul_A1911 tryptophan synthase subunit alpha; PFAM: Tryptophan synthase, alpha chain; tryptophan synthase subunit alpha 895663 10297491 NAL212_0979 Nitrosomonas sp. AL212 tryptophan synthase subunit alpha YP_004294061.1 894800 D 153948 CDS YP_004294062.1 325981660 10297492 895691..896560 1 NC_015222.1 TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; KEGG: net:Neut_1154 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase; acetyl-CoA carboxylase, carboxyl transferase subunit beta 896560 10297492 NAL212_0980 Nitrosomonas sp. AL212 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_004294062.1 895691 D 153948 CDS YP_004294063.1 325981661 10297493 896581..897879 1 NC_015222.1 TIGRFAM: Folylpolyglutamate synthetase; KEGG: nmu:Nmul_A1909 FolC bifunctional protein; PFAM: Mur ligase, central; Mur ligase, C-terminal; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 897879 10297493 NAL212_0981 Nitrosomonas sp. AL212 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_004294063.1 896581 D 153948 CDS YP_004294064.1 325981662 10297494 897896..898603 1 NC_015222.1 PFAM: Sporulation-related domain; KEGG: net:Neut_1156 sporulation domain-containing protein; sporulation domain-containing protein 898603 10297494 NAL212_0982 Nitrosomonas sp. AL212 sporulation domain-containing protein YP_004294064.1 897896 D 153948 CDS YP_004294065.1 325981663 10297495 898688..899194 1 NC_015222.1 PFAM: Colicin V production, CvpA; KEGG: nmu:Nmul_A1907 colicin V production protein; colicin V production protein 899194 10297495 NAL212_0983 Nitrosomonas sp. AL212 colicin V production protein YP_004294065.1 898688 D 153948 CDS YP_004294066.1 325981664 10297496 899305..900825 1 NC_015222.1 TIGRFAM: Amidophosphoribosyl transferase; KEGG: nmu:Nmul_A1906 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase; amidophosphoribosyltransferase 900825 10297496 NAL212_0984 Nitrosomonas sp. AL212 amidophosphoribosyltransferase YP_004294066.1 899305 D 153948 CDS YP_004294067.1 325981665 10297497 900933..902111 1 NC_015222.1 KEGG: neu:NE0700 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; O-succinylhomoserine sulfhydrylase 902111 10297497 NAL212_0985 Nitrosomonas sp. AL212 O-succinylhomoserine sulfhydrylase YP_004294067.1 900933 D 153948 CDS YP_004294068.1 325981666 10297498 complement(902168..902659) 1 NC_015222.1 KEGG: nmu:Nmul_A1885 peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; peptidyl-prolyl isomerase 902659 10297498 NAL212_0986 Nitrosomonas sp. AL212 peptidyl-prolyl isomerase YP_004294068.1 902168 R 153948 CDS YP_004294069.1 325981667 10297499 complement(902690..903271) 1 NC_015222.1 KEGG: neu:NE0042 cyclophilin-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; peptidyl-prolyl isomerase 903271 10297499 NAL212_0987 Nitrosomonas sp. AL212 peptidyl-prolyl isomerase YP_004294069.1 902690 R 153948 CDS YP_004294070.1 325981668 10297500 903413..904792 1 NC_015222.1 KEGG: nmu:Nmul_A1881 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia; Cysteinyl-tRNA synthetase, class Ia, DALR; manually curated; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; SMART: Cysteinyl-tRNA synthetase, class Ia, DALR; cysteinyl-tRNA synthetase 904792 10297500 NAL212_0988 Nitrosomonas sp. AL212 cysteinyl-tRNA synthetase YP_004294070.1 903413 D 153948 CDS YP_004294071.1 325981669 10297501 complement(904811..905560) 1 NC_015222.1 KEGG: neu:NE0044 hypothetical protein; hypothetical protein 905560 10297501 NAL212_0989 Nitrosomonas sp. AL212 hypothetical protein YP_004294071.1 904811 R 153948 CDS YP_004294072.1 325981670 10297502 complement(905581..906519) 1 NC_015222.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: neu:NE0045 flagellar motor protein MotB; OmpA/MotB domain-containing protein 906519 10297502 NAL212_0990 Nitrosomonas sp. AL212 OmpA/MotB domain-containing protein YP_004294072.1 905581 R 153948 CDS YP_004294073.1 325981671 10297503 complement(906570..907430) 1 NC_015222.1 KEGG: net:Neut_0188 flagellar motor protein MotA; TIGRFAM: Flagellar motor stator, MotA; PFAM: MotA/TolQ/ExbB proton channel; flagellar motor stator protein MotA 907430 10297503 NAL212_0991 Nitrosomonas sp. AL212 flagellar motor stator protein MotA YP_004294073.1 906570 R 153948 CDS YP_004294074.1 325981672 10297504 complement(907666..909477) 1 NC_015222.1 PFAM: ABC transporter, transmembrane domain; ABC transporter-like; KEGG: nmu:Nmul_A0682 ABC transporter related; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 909477 10297504 NAL212_0992 Nitrosomonas sp. AL212 xenobiotic-transporting ATPase YP_004294074.1 907666 R 153948 CDS YP_004294075.1 325981673 10297505 complement(909500..910777) 1 NC_015222.1 KEGG: lbf:LBF_0870 NRAMP-family transporter; NRAMP-family transporter 910777 10297505 NAL212_0993 Nitrosomonas sp. AL212 NRAMP-family transporter YP_004294075.1 909500 R 153948 CDS YP_004294076.1 325981674 10297506 910998..911402 1 NC_015222.1 KEGG: neu:NE1916 hypothetical protein; hypothetical protein 911402 10297506 NAL212_0994 Nitrosomonas sp. AL212 hypothetical protein YP_004294076.1 910998 D 153948 CDS YP_004294077.1 325981675 10297507 complement(911399..911701) 1 NC_015222.1 KEGG: slt:Slit_0989 hypothetical protein; hypothetical protein 911701 10297507 NAL212_0995 Nitrosomonas sp. AL212 hypothetical protein YP_004294077.1 911399 R 153948 CDS YP_004294078.1 325981676 10297508 complement(911742..913460) 1 NC_015222.1 PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; KEGG: pna:Pnap_0633 sodium/hydrogen exchanger; sodium/hydrogen exchanger 913460 10297508 NAL212_0996 Nitrosomonas sp. AL212 sodium/hydrogen exchanger YP_004294078.1 911742 R 153948 CDS YP_004294079.1 325981677 10297509 complement(913551..915419) 1 NC_015222.1 KEGG: shi:Shel_00990 hypothetical protein; hypothetical protein 915419 10297509 NAL212_0997 Nitrosomonas sp. AL212 hypothetical protein YP_004294079.1 913551 R 153948 CDS YP_004294080.1 325981678 10297510 complement(915629..917980) 1 NC_015222.1 KEGG: neu:NE1277 hypothetical protein; hypothetical protein 917980 10297510 NAL212_0998 Nitrosomonas sp. AL212 hypothetical protein YP_004294080.1 915629 R 153948 CDS YP_004294081.1 325981679 10297511 complement(918249..918917) 1 NC_015222.1 KEGG: pyo:PY05175 hypothetical protein; hypothetical protein 918917 10297511 NAL212_0999 Nitrosomonas sp. AL212 hypothetical protein YP_004294081.1 918249 R 153948 CDS YP_004294082.1 325981680 10297512 919297..920379 1 NC_015222.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: neu:NE0396 hypothetical protein; ADP-ribosylation/Crystallin J1 920379 10297512 NAL212_1000 Nitrosomonas sp. AL212 ADP-ribosylation/Crystallin J1 YP_004294082.1 919297 D 153948 CDS YP_004294083.1 325981681 10297515 complement(922577..922876) 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: rms:RMA_0745 transposase; transposase IS3/IS911 family protein 922876 10297515 NAL212_1003 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004294083.1 922577 R 153948 CDS YP_004294084.1 325981682 10297516 complement(922936..923667) 1 NC_015222.1 PFAM: Plasmid recombination enzyme; KEGG: tbd:Tbd_2002 hypothetical protein; plasmid recombination protein 923667 10297516 NAL212_1004 Nitrosomonas sp. AL212 plasmid recombination protein YP_004294084.1 922936 R 153948 CDS YP_004294085.1 325981683 10297517 complement(923671..923811) 1 NC_015222.1 hypothetical protein 923811 10297517 NAL212_1005 Nitrosomonas sp. AL212 hypothetical protein YP_004294085.1 923671 R 153948 CDS YP_004294086.1 325981684 10297518 complement(923804..924100) 1 NC_015222.1 KEGG: pna:Pnap_2648 hypothetical protein; hypothetical protein 924100 10297518 NAL212_1006 Nitrosomonas sp. AL212 hypothetical protein YP_004294086.1 923804 R 153948 CDS YP_004294087.1 325981685 10297519 complement(924102..924347) 1 NC_015222.1 KEGG: meh:M301_1799 phage transcriptional regulator, AlpA; hypothetical protein 924347 10297519 NAL212_1007 Nitrosomonas sp. AL212 hypothetical protein YP_004294087.1 924102 R 153948 CDS YP_004294088.1 325981686 10297520 complement(924460..925200) 1 NC_015222.1 KEGG: msy:MS53_0495 hypothetical protein; hypothetical protein 925200 10297520 NAL212_1008 Nitrosomonas sp. AL212 hypothetical protein YP_004294088.1 924460 R 153948 CDS YP_004294089.1 325981687 10297521 complement(925203..926408) 1 NC_015222.1 PFAM: Integrase, catalytic core, phage; KEGG: rso:RSc1871 putative integrase prophage protein; integrase family protein 926408 10297521 NAL212_1009 Nitrosomonas sp. AL212 integrase family protein YP_004294089.1 925203 R 153948 CDS YP_004294090.1 325981688 10297523 926875..927174 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: rms:RMA_0745 transposase; transposase IS3/IS911 family protein 927174 10297523 NAL212_1010 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004294090.1 926875 D 153948 CDS YP_004294091.1 325981689 10297524 927206..928360 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region; integrase catalytic region 928360 10297524 NAL212_1011 Nitrosomonas sp. AL212 integrase catalytic region YP_004294091.1 927206 D 153948 CDS YP_004294092.1 325981690 10297527 complement(929603..930070) 1 NC_015222.1 PFAM: MEKHLA; KEGG: nde:NIDE4343 hypothetical protein; MEKHLA domain-containing protein 930070 10297527 NAL212_1013 Nitrosomonas sp. AL212 MEKHLA domain-containing protein YP_004294092.1 929603 R 153948 CDS YP_004294093.1 325981691 10297528 complement(930170..931768) 1 NC_015222.1 TIGRFAM: L-aspartate oxidase; KEGG: nmu:Nmul_A1743 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; L-aspartate oxidase 931768 10297528 NAL212_1014 Nitrosomonas sp. AL212 L-aspartate oxidase YP_004294093.1 930170 R 153948 CDS YP_004294094.1 325981692 10297529 932047..932646 1 NC_015222.1 KEGG: nmu:Nmul_A1746 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma-70 RpoE type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 subunit 932646 10297529 NAL212_1015 Nitrosomonas sp. AL212 ECF subfamily RNA polymerase sigma-24 subunit YP_004294094.1 932047 D 153948 CDS YP_004294095.1 325981693 10297530 932648..933196 1 NC_015222.1 PFAM: Anti sigma-E protein RseA, N-terminal; KEGG: nmu:Nmul_A1747 anti sigma-E protein RseA; anti sigma-E protein, RseA 933196 10297530 NAL212_1016 Nitrosomonas sp. AL212 anti sigma-E protein, RseA YP_004294095.1 932648 D 153948 CDS YP_004294096.1 325981694 10297531 933193..934179 1 NC_015222.1 PFAM: MucB/RseB; KEGG: nmu:Nmul_A1748 sigma E regulatory protein, MucB/RseB; sigma E regulatory protein MucB/RseB 934179 10297531 NAL212_1017 Nitrosomonas sp. AL212 sigma E regulatory protein MucB/RseB YP_004294096.1 933193 D 153948 CDS YP_004294097.1 325981695 10297532 934337..935752 1 NC_015222.1 SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: net:Neut_1783 protease Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; protease Do 935752 10297532 NAL212_1018 Nitrosomonas sp. AL212 protease Do YP_004294097.1 934337 D 153948 CDS YP_004294098.1 325981696 10297533 935736..936026 1 NC_015222.1 PFAM: Glutaredoxin-like; KEGG: net:Neut_1782 glutaredoxin 2; glutaredoxin 2 936026 10297533 NAL212_1019 Nitrosomonas sp. AL212 glutaredoxin 2 YP_004294098.1 935736 D 153948 CDS YP_004294099.1 325981697 10297534 936129..937922 1 NC_015222.1 TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; KEGG: nmu:Nmul_A1751 GTP-binding protein LepA; SMART: Translation elongation factor EFG/EF2, C-terminal; GTP-binding protein LepA 937922 10297534 NAL212_1020 Nitrosomonas sp. AL212 GTP-binding protein LepA YP_004294099.1 936129 D 153948 CDS YP_004294100.1 325981698 10297535 938029..938832 1 NC_015222.1 TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: net:Neut_1780 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region; signal peptidase I 938832 10297535 NAL212_1021 Nitrosomonas sp. AL212 signal peptidase I YP_004294100.1 938029 D 153948 CDS YP_004294101.1 325981699 10297536 938859..939236 1 NC_015222.1 KEGG: neu:NE2325 transmembrane protein; transmembrane protein 939236 10297536 NAL212_1022 Nitrosomonas sp. AL212 transmembrane protein YP_004294101.1 938859 D 153948 CDS YP_004294102.1 325981700 10297537 939243..939956 1 NC_015222.1 SMART: Ribonuclease III; Double-stranded RNA-binding; TIGRFAM: Ribonuclease III, bacterial; KEGG: nmu:Nmul_A1753 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA-binding; ribonuclease III 939956 10297537 NAL212_1023 Nitrosomonas sp. AL212 ribonuclease III YP_004294102.1 939243 D 153948 CDS YP_004294103.1 325981701 10297538 940002..940895 1 NC_015222.1 KEGG: neu:NE2323 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; GTP-binding protein Era 940895 10297538 NAL212_1024 Nitrosomonas sp. AL212 GTP-binding protein Era YP_004294103.1 940002 D 153948 CDS YP_004294104.1 325981702 10297539 940934..941659 1 NC_015222.1 TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; KEGG: nmu:Nmul_A1759 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; pyridoxal phosphate biosynthetic protein PdxJ 941659 10297539 NAL212_1025 Nitrosomonas sp. AL212 pyridoxal phosphate biosynthetic protein PdxJ YP_004294104.1 940934 D 153948 CDS YP_004294105.1 325981703 10297540 941656..942033 1 NC_015222.1 KEGG: nmu:Nmul_A1760 4'-phosphopantetheinyl transferase; TIGRFAM: Holo-[acyl carrier protein] synthase; Phosphopantethiene-protein transferase; PFAM: 4'-phosphopantetheinyl transferase; holo-ACP synthase 942033 10297540 NAL212_1026 Nitrosomonas sp. AL212 holo-ACP synthase YP_004294105.1 941656 D 153948 CDS YP_004294106.1 325981704 10297541 942036..943088 1 NC_015222.1 PFAM: Glycoside hydrolase, family 3, N-terminal; KEGG: slt:Slit_1287 glycoside hydrolase family 3 domain protein; glycoside hydrolase family protein 943088 10297541 NAL212_1027 Nitrosomonas sp. AL212 glycoside hydrolase family protein YP_004294106.1 942036 D 153948 CDS YP_004294107.1 325981705 10297542 943177..944637 1 NC_015222.1 TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: nmu:Nmul_A0855 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; dihydrolipoamide dehydrogenase 944637 10297542 NAL212_1028 Nitrosomonas sp. AL212 dihydrolipoamide dehydrogenase YP_004294107.1 943177 D 153948 CDS YP_004294108.1 325981706 10297543 complement(944685..945134) 1 NC_015222.1 KEGG: net:Neut_0544 hypothetical protein; hypothetical protein 945134 10297543 NAL212_1029 Nitrosomonas sp. AL212 hypothetical protein YP_004294108.1 944685 R 153948 CDS YP_004294109.1 325981707 10297545 945916..946416 1 NC_015222.1 PFAM: Uncharacterised protein family CreA; KEGG: net:Neut_0213 CreA family protein; CreA family protein 946416 10297545 NAL212_1030 Nitrosomonas sp. AL212 CreA family protein YP_004294109.1 945916 D 153948 CDS YP_004294110.1 325981708 10297546 946529..947782 1 NC_015222.1 KEGG: nmu:Nmul_A2642 glutamyl-tRNA reductase; TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; glutamyl-tRNA reductase 947782 10297546 NAL212_1031 Nitrosomonas sp. AL212 glutamyl-tRNA reductase YP_004294110.1 946529 D 153948 CDS YP_004294111.1 325981709 10297547 947779..948858 1 NC_015222.1 TIGRFAM: Peptide chain release factor 1; PFAM: Peptide chain release factor class I/class II; Peptide chain release factor; KEGG: nmu:Nmul_A2641 peptide chain release factor 1; SMART: Peptide chain release factor; peptide chain release factor 1 948858 10297547 NAL212_1032 Nitrosomonas sp. AL212 peptide chain release factor 1 YP_004294111.1 947779 D 153948 CDS YP_004294112.1 325981710 10297548 948891..949727 1 NC_015222.1 TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; KEGG: nmu:Nmul_A2640 HemK family modification methylase; PFAM: Methyltransferase small; protein-(glutamine-N5) methyltransferase 949727 10297548 NAL212_1033 Nitrosomonas sp. AL212 protein-(glutamine-N5) methyltransferase YP_004294112.1 948891 D 153948 CDS YP_004294113.1 325981711 10297549 949831..950139 1 NC_015222.1 KEGG: nmu:Nmul_A2639 glutaredoxin-like protein; TIGRFAM: Monothiol glutaredoxin-related; PFAM: Glutaredoxin; glutaredoxin-like protein 950139 10297549 NAL212_1034 Nitrosomonas sp. AL212 glutaredoxin-like protein YP_004294113.1 949831 D 153948 CDS YP_004294114.1 325981712 10297550 complement(950218..950637) 1 NC_015222.1 PFAM: SNARE associated Golgi protein; KEGG: nmu:Nmul_A2638 putative inner membrane protein; hypothetical protein 950637 10297550 NAL212_1035 Nitrosomonas sp. AL212 hypothetical protein YP_004294114.1 950218 R 153948 CDS YP_004294115.1 325981713 10297551 complement(951085..951723) 1 NC_015222.1 KEGG: rsk:RSKD131_2511 hemolysin-type calcium-binding toxin; hemolysin-type calcium-binding toxin 951723 10297551 NAL212_1036 Nitrosomonas sp. AL212 hemolysin-type calcium-binding toxin YP_004294115.1 951085 R 153948 CDS YP_004294116.1 325981714 10297552 951915..953471 1 NC_015222.1 KEGG: mmw:Mmwyl1_0245 cytidyltransferase-like protein; TIGRFAM: Cytidyltransferase-related; PFAM: Cytidylyltransferase; LicD-like; cytidyltransferase-related domain-containing protein 953471 10297552 NAL212_1037 Nitrosomonas sp. AL212 cytidyltransferase-related domain-containing protein YP_004294116.1 951915 D 153948 CDS YP_004294117.1 325981715 10297553 953575..954750 1 NC_015222.1 PFAM: WD40-like Beta Propeller; Protein of unknown function DUF839; KEGG: tcu:Tcur_2162 protein of unknown function DUF839; WD40-like beta Propeller containing protein 954750 10297553 NAL212_1038 Nitrosomonas sp. AL212 WD40-like beta Propeller containing protein YP_004294117.1 953575 D 153948 CDS YP_004294118.1 325981716 10297554 complement(954823..955440) 1 NC_015222.1 KEGG: nmu:Nmul_A1597 hypothetical protein; hypothetical protein 955440 10297554 NAL212_1039 Nitrosomonas sp. AL212 hypothetical protein YP_004294118.1 954823 R 153948 CDS YP_004294119.1 325981717 10297555 complement(955491..956606) 1 NC_015222.1 PFAM: Protein of unknown function DUF1624; KEGG: cps:CPS_0458 hypothetical protein; hypothetical protein 956606 10297555 NAL212_1040 Nitrosomonas sp. AL212 hypothetical protein YP_004294119.1 955491 R 153948 CDS YP_004294120.1 325981718 10297556 complement(956666..957775) 1 NC_015222.1 TIGRFAM: Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; KEGG: nmu:Nmul_A1843 gamma-glutamyl kinase; SMART: Pseudouridine synthase/archaeosine transglycosylase; glutamate 5-kinase 957775 10297556 NAL212_1041 Nitrosomonas sp. AL212 glutamate 5-kinase YP_004294120.1 956666 R 153948 CDS YP_004294121.1 325981719 10297557 complement(957769..958833) 1 NC_015222.1 KEGG: nmu:Nmul_A1817 GTPase ObgE; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; GTP-binding protein Obg/CgtA 958833 10297557 NAL212_1042 Nitrosomonas sp. AL212 GTP-binding protein Obg/CgtA YP_004294121.1 957769 R 153948 CDS YP_004294122.1 325981720 10297558 complement(958942..959199) 1 NC_015222.1 KEGG: nmu:Nmul_A1816 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27; PFAM: Ribosomal protein L27; 50S ribosomal protein L27 959199 10297558 NAL212_1043 Nitrosomonas sp. AL212 50S ribosomal protein L27 YP_004294122.1 958942 R 153948 CDS YP_004294123.1 325981721 10297559 complement(959211..959522) 1 NC_015222.1 KEGG: nmu:Nmul_A1815 50S ribosomal protein L21; TIGRFAM: Ribosomal protein L21; PFAM: Ribosomal protein L21; 50S ribosomal protein L21 959522 10297559 NAL212_1044 Nitrosomonas sp. AL212 50S ribosomal protein L21 YP_004294123.1 959211 R 153948 CDS YP_004294124.1 325981722 10297560 959670..960638 1 NC_015222.1 manually curated; KEGG: net:Neut_0825 farnesyltranstransferase; PFAM: Polyprenyl synthetase; Trans-hexaprenyltranstransferase 960638 10297560 NAL212_1045 Nitrosomonas sp. AL212 Trans-hexaprenyltranstransferase YP_004294124.1 959670 D 153948 CDS YP_004294125.1 325981723 10297561 961008..964676 1 NC_015222.1 TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-3; KEGG: rru:Rru_A2406 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAC motif; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; multi-sensor signal transduction histidine kinase 964676 10297561 NAL212_1046 Nitrosomonas sp. AL212 multi-sensor signal transduction histidine kinase YP_004294125.1 961008 D 153948 CDS YP_004294126.1 325981724 10297562 964698..965120 1 NC_015222.1 KEGG: azo:azo3382 putative two-component system regulatory protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; response regulator receiver protein 965120 10297562 NAL212_1047 Nitrosomonas sp. AL212 response regulator receiver protein YP_004294126.1 964698 D 153948 CDS YP_004294127.1 325981725 10297563 965126..968536 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold; Signal transduction response regulator, receiver domain; PAS fold-3; Diguanylate cyclase, predicted; KEGG: neu:NE1700 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif; Signal transduction response regulator, receiver domain; GAF; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 968536 10297563 NAL212_1048 Nitrosomonas sp. AL212 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) YP_004294127.1 965126 D 153948 CDS YP_004294128.1 325981726 10297564 968520..969158 1 NC_015222.1 KEGG: nwa:Nwat_2651 hypothetical protein; hypothetical protein 969158 10297564 NAL212_1049 Nitrosomonas sp. AL212 hypothetical protein YP_004294128.1 968520 D 153948 CDS YP_004294129.1 325981727 10297565 complement(969246..970979) 1 NC_015222.1 PFAM: Domain of unknown function DUF87; KEGG: tmz:Tmz1t_0482 protein of unknown function DUF87; hypothetical protein 970979 10297565 NAL212_1050 Nitrosomonas sp. AL212 hypothetical protein YP_004294129.1 969246 R 153948 CDS YP_004294130.1 325981728 10297566 complement(970990..972003) 1 NC_015222.1 KEGG: neu:NE2094 hypothetical protein; hypothetical protein 972003 10297566 NAL212_1051 Nitrosomonas sp. AL212 hypothetical protein YP_004294130.1 970990 R 153948 CDS YP_004294131.1 325981729 10297567 complement(972079..973419) 1 NC_015222.1 PFAM: Protein of unknown function DUF2130; KEGG: llo:LLO_2961 coiled-coil protein; hypothetical protein 973419 10297567 NAL212_1052 Nitrosomonas sp. AL212 hypothetical protein YP_004294131.1 972079 R 153948 CDS YP_004294132.1 325981730 10297569 complement(973839..974018) 1 NC_015222.1 hypothetical protein 974018 10297569 NAL212_1054 Nitrosomonas sp. AL212 hypothetical protein YP_004294132.1 973839 R 153948 CDS YP_004294133.1 325981731 10297570 974193..975200 1 NC_015222.1 PFAM: Haemolysin-type calcium-binding repeat; KEGG: ppd:Ppro_2370 Ig family protein; hemolysin-type calcium-binding protein 975200 10297570 NAL212_1055 Nitrosomonas sp. AL212 hemolysin-type calcium-binding protein YP_004294133.1 974193 D 153948 CDS YP_004294134.1 325981732 10297571 975463..975972 1 NC_015222.1 KEGG: bam:Bamb_1619 major facilitator transporter; hypothetical protein 975972 10297571 NAL212_1056 Nitrosomonas sp. AL212 hypothetical protein YP_004294134.1 975463 D 153948 CDS YP_004294135.1 325981733 10297572 976270..977325 1 NC_015222.1 TIGRFAM: Queuosine biosynthesis protein; HAMAP: Queuosine biosynthesis protein; KEGG: neu:NE1140 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 977325 10297572 NAL212_1057 Nitrosomonas sp. AL212 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_004294135.1 976270 D 153948 CDS YP_004294136.1 325981734 10297573 977322..978407 1 NC_015222.1 TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; KEGG: nmu:Nmul_A2429 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 978407 10297573 NAL212_1058 Nitrosomonas sp. AL212 queuine tRNA-ribosyltransferase YP_004294136.1 977322 D 153948 CDS YP_004294137.1 325981735 10297574 978454..978912 1 NC_015222.1 KEGG: net:Neut_1432 preprotein translocase, YajC subunit; TIGRFAM: Preprotein translocase YajC; PFAM: Preprotein translocase YajC; preprotein translocase subunit YajC 978912 10297574 NAL212_1059 Nitrosomonas sp. AL212 preprotein translocase subunit YajC YP_004294137.1 978454 D 153948 CDS YP_004294138.1 325981736 10297575 978998..981088 1 NC_015222.1 KEGG: nmu:Nmul_A2427 preprotein translocase subunit SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein, bacteria; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal; protein-export membrane protein SecD 981088 10297575 NAL212_1060 Nitrosomonas sp. AL212 protein-export membrane protein SecD YP_004294138.1 978998 D 153948 CDS YP_004294139.1 325981737 10297576 981110..982048 1 NC_015222.1 KEGG: nmu:Nmul_A2426 preprotein translocase subunit SecF; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein, bacteria; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal; protein-export membrane protein SecF 982048 10297576 NAL212_1061 Nitrosomonas sp. AL212 protein-export membrane protein SecF YP_004294139.1 981110 D 153948 CDS YP_004294140.1 325981738 10297577 982375..982803 1 NC_015222.1 KEGG: spl:Spea_3669 hypothetical protein; hypothetical protein 982803 10297577 NAL212_1062 Nitrosomonas sp. AL212 hypothetical protein YP_004294140.1 982375 D 153948 CDS YP_004294141.1 325981739 10297580 complement(983954..985948) 1 NC_015222.1 PFAM: IstB-like ATP-binding protein; Integrase, catalytic core; KEGG: mms:mma_2809 transposase IstA; IstB domain-containing protein ATP-binding protein 985948 10297580 NAL212_1065 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004294141.1 983954 R 153948 CDS YP_004294142.1 325981740 10297584 complement(987059..987163) 1 NC_015222.1 hypothetical protein 987163 10297584 NAL212_1069 Nitrosomonas sp. AL212 hypothetical protein YP_004294142.1 987059 R 153948 CDS YP_004294143.1 325981741 10297587 complement(987920..988216) 1 NC_015222.1 PFAM: Cell division protein ZapA-like; KEGG: neu:NE1890 hypothetical protein; hypothetical protein 988216 10297587 NAL212_1071 Nitrosomonas sp. AL212 hypothetical protein YP_004294143.1 987920 R 153948 CDS YP_004294144.1 325981742 10297588 complement(988209..988406) 1 NC_015222.1 KEGG: neu:NE1891 hypothetical protein; hypothetical protein 988406 10297588 NAL212_1072 Nitrosomonas sp. AL212 hypothetical protein YP_004294144.1 988209 R 153948 CDS YP_004294145.1 325981743 10297589 complement(988791..989990) 1 NC_015222.1 KEGG: neu:NE2283 hypothetical protein; PFAM: ZipA, C-terminal FtsZ-binding domain; SMART: ZipA, C-terminal FtsZ-binding domain; ZipA FtsZ-binding region protein 989990 10297589 NAL212_1073 Nitrosomonas sp. AL212 ZipA FtsZ-binding region protein YP_004294145.1 988791 R 153948 CDS YP_004294146.1 325981744 10297590 complement(990064..993615) 1 NC_015222.1 KEGG: nmu:Nmul_A0645 chromosome segregation protein SMC; TIGRFAM: Chromosome segregation protein SMC; PFAM: RecF/RecN/SMC; SMCs flexible hinge; chromosome segregation protein SMC 993615 10297590 NAL212_1074 Nitrosomonas sp. AL212 chromosome segregation protein SMC YP_004294146.1 990064 R 153948 CDS YP_004294147.1 325981745 10297591 993713..994132 1 NC_015222.1 TIGRFAM: Nitrile oxidoreductase, NADPH-dependent, QueF; KEGG: net:Neut_2123 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; 7-cyano-7-deazaguanine reductase 994132 10297591 NAL212_1075 Nitrosomonas sp. AL212 7-cyano-7-deazaguanine reductase YP_004294147.1 993713 D 153948 CDS YP_004294148.1 325981746 10297592 994287..995579 1 NC_015222.1 KEGG: neu:NE2421 LysM motif-containing protein; PFAM: Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; Lytic transglycosylase catalytic 995579 10297592 NAL212_1076 Nitrosomonas sp. AL212 Lytic transglycosylase catalytic YP_004294148.1 994287 D 153948 CDS YP_004294149.1 325981747 10297593 complement(995627..997087) 1 NC_015222.1 PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; KEGG: neu:NE0569 cytosol aminopeptidase; peptidase M17 leucyl aminopeptidase domain-containing protein 997087 10297593 NAL212_1077 Nitrosomonas sp. AL212 peptidase M17 leucyl aminopeptidase domain-containing protein YP_004294149.1 995627 R 153948 CDS YP_004294150.1 325981748 10297594 997256..998050 1 NC_015222.1 TIGRFAM: Thymidylate synthase; KEGG: nmu:Nmul_A1962 thymidylate synthase; PFAM: Thymidylate synthase; thymidylate synthase 998050 10297594 NAL212_1078 Nitrosomonas sp. AL212 thymidylate synthase YP_004294150.1 997256 D 153948 CDS YP_004294151.1 325981749 10297595 998047..998550 1 NC_015222.1 PFAM: Dihydrofolate reductase domain; KEGG: nmu:Nmul_A1963 dihydrofolate reductase; dihydrofolate reductase subunit 998550 10297595 NAL212_1079 Nitrosomonas sp. AL212 dihydrofolate reductase subunit YP_004294151.1 998047 D 153948 CDS YP_004294152.1 325981750 10297596 complement(998681..999856) 1 NC_015222.1 KEGG: nmu:Nmul_A1964 Orn/DAP/Arg decarboxylase 2; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal; Ornithine decarboxylase 999856 10297596 NAL212_1080 Nitrosomonas sp. AL212 Ornithine decarboxylase YP_004294152.1 998681 R 153948 CDS YP_004294153.1 325981751 10297597 complement(1000162..1001394) 1 NC_015222.1 TIGRFAM: Conserved hypothetical protein CHP03790; KEGG: nmu:Nmul_A2461 hypothetical protein; hypothetical protein 1001394 10297597 NAL212_1081 Nitrosomonas sp. AL212 hypothetical protein YP_004294153.1 1000162 R 153948 CDS YP_004294154.1 325981752 10297598 complement(1001452..1002018) 1 NC_015222.1 TIGRFAM: Deoxycytidine triphosphate deaminase; KEGG: net:Neut_1923 deoxycytidine triphosphate deaminase; PFAM: DeoxyUTP pyrophosphatase domain; deoxycytidine triphosphate deaminase 1002018 10297598 NAL212_1082 Nitrosomonas sp. AL212 deoxycytidine triphosphate deaminase YP_004294154.1 1001452 R 153948 CDS YP_004294155.1 325981753 10297599 complement(1002033..1003121) 1 NC_015222.1 PFAM: ATPase-like, ParA/MinD; Domain of unknown function DUF59; KEGG: neu:NE0624 hypothetical protein; ParA/MinD-like ATPase 1003121 10297599 NAL212_1083 Nitrosomonas sp. AL212 ParA/MinD-like ATPase YP_004294155.1 1002033 R 153948 CDS YP_004294156.1 325981754 10297600 1003247..1005352 1 NC_015222.1 TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; KEGG: neu:NE0625 methionyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding domain; methionyl-tRNA synthetase 1005352 10297600 NAL212_1084 Nitrosomonas sp. AL212 methionyl-tRNA synthetase YP_004294156.1 1003247 D 153948 CDS YP_004294157.1 325981755 10297601 1005361..1005726 1 NC_015222.1 KEGG: lpp:plpp0126 hypothetical protein; hypothetical protein 1005726 10297601 NAL212_1085 Nitrosomonas sp. AL212 hypothetical protein YP_004294157.1 1005361 D 153948 CDS YP_004294158.1 325981756 10297602 1005751..1006500 1 NC_015222.1 KEGG: bpt:Bpet2896 hypothetical protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal; hypothetical protein 1006500 10297602 NAL212_1086 Nitrosomonas sp. AL212 hypothetical protein YP_004294158.1 1005751 D 153948 CDS YP_004294159.1 325981757 10297603 1006987..1007694 1 NC_015222.1 PFAM: FG-GAP; KEGG: npu:Npun_F1457 putative outer membrane adhesin like proteiin; FG-GAP repeat-containing protein 1007694 10297603 NAL212_1087 Nitrosomonas sp. AL212 FG-GAP repeat-containing protein YP_004294159.1 1006987 D 153948 CDS YP_004294160.1 325981758 10297604 1007764..1009038 1 NC_015222.1 PFAM: FG-GAP; Haemolysin-type calcium-binding repeat; KEGG: syf:Synpcc7942_1337 integrins alpha chain; FG-GAP repeat-containing protein 1009038 10297604 NAL212_1088 Nitrosomonas sp. AL212 FG-GAP repeat-containing protein YP_004294160.1 1007764 D 153948 CDS YP_004294161.1 325981759 10297605 complement(1009258..1010244) 1 NC_015222.1 KEGG: nmu:Nmul_A0564 transmembrane protein; hypothetical protein 1010244 10297605 NAL212_1089 Nitrosomonas sp. AL212 hypothetical protein YP_004294161.1 1009258 R 153948 CDS YP_004294162.1 325981760 10297606 complement(1010289..1011239) 1 NC_015222.1 TIGRFAM: Homoserine kinase ThrB; KEGG: nmu:Nmul_A0565 homoserine kinase; PFAM: Aminoglycoside phosphotransferase; homoserine kinase 1011239 10297606 NAL212_1090 Nitrosomonas sp. AL212 homoserine kinase YP_004294162.1 1010289 R 153948 CDS YP_004294163.1 325981761 10297607 complement(1011318..1011716) 1 NC_015222.1 PFAM: Protein of unknown function DUF2782; KEGG: net:Neut_0776 hypothetical protein; hypothetical protein 1011716 10297607 NAL212_1091 Nitrosomonas sp. AL212 hypothetical protein YP_004294163.1 1011318 R 153948 CDS YP_004294164.1 325981762 10297608 complement(1011773..1012498) 1 NC_015222.1 KEGG: net:Neut_0777 hypothetical protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; hypothetical protein 1012498 10297608 NAL212_1092 Nitrosomonas sp. AL212 hypothetical protein YP_004294164.1 1011773 R 153948 CDS YP_004294165.1 325981763 10297609 1012512..1015262 1 NC_015222.1 TIGRFAM: DNA polymerase 1; PFAM: DNA-directed DNA polymerase, family A, palm domain; 3'-5' exonuclease; 5'-3' exonuclease, alpha-helical arch, N-terminal; 5'-3' exonuclease, SAM-fold domain; KEGG: nmu:Nmul_A0568 DNA polymerase I; SMART: 5'-3' exonuclease, N-terminal; DNA-directed DNA polymerase, family A, palm domain; 3'-5' exonuclease; Helix-hairpin-helix motif, class 2; DNA polymerase I 1015262 10297609 NAL212_1093 Nitrosomonas sp. AL212 DNA polymerase I YP_004294165.1 1012512 D 153948 CDS YP_004294166.1 325981764 10297610 complement(1015296..1017809) 1 NC_015222.1 TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA-binding domain; KEGG: net:Neut_1707 ribonuclease, Rne/Rng family protein; SMART: RNA-binding domain, S1; ribonuclease, Rne/Rng family 1017809 10297610 NAL212_1094 Nitrosomonas sp. AL212 ribonuclease, Rne/Rng family YP_004294166.1 1015296 R 153948 CDS YP_004294167.1 325981765 10297611 1018247..1019227 1 NC_015222.1 TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: neu:NE1456 ribosomal large subunit pseudouridine synthase C; SMART: RNA-binding S4; RluA family pseudouridine synthase 1019227 10297611 NAL212_1095 Nitrosomonas sp. AL212 RluA family pseudouridine synthase YP_004294167.1 1018247 D 153948 CDS YP_004294168.1 325981766 10297612 complement(1019277..1019843) 1 NC_015222.1 KEGG: nmu:Nmul_A1973 arylesterase; PFAM: Lipase, GDSL; arylesterase 1019843 10297612 NAL212_1096 Nitrosomonas sp. AL212 arylesterase YP_004294168.1 1019277 R 153948 CDS YP_004294169.1 325981767 10297613 1019920..1020609 1 NC_015222.1 SMART: ATPase, AAA+ type, core; manually curated; KEGG: nmu:Nmul_A1972 ABC transporter related; PFAM: ABC transporter-like; phosphonate-transporting ATPase 1020609 10297613 NAL212_1097 Nitrosomonas sp. AL212 phosphonate-transporting ATPase YP_004294169.1 1019920 D 153948 CDS YP_004294170.1 325981768 10297614 1020672..1023182 1 NC_015222.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: nmu:Nmul_A0948 hypothetical protein; hypothetical protein 1023182 10297614 NAL212_1098 Nitrosomonas sp. AL212 hypothetical protein YP_004294170.1 1020672 D 153948 CDS YP_004294171.1 325981769 10297615 1023187..1024401 1 NC_015222.1 TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; KEGG: nmu:Nmul_A0068 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 1024401 10297615 NAL212_1099 Nitrosomonas sp. AL212 oxygen-independent coproporphyrinogen III oxidase YP_004294171.1 1023187 D 153948 CDS YP_004294172.1 325981770 10297616 1024426..1025229 1 NC_015222.1 PFAM: Formate/nitrite transporter; KEGG: pjd:Pjdr2_5915 formate/nitrite transporter; formate/nitrite transporter 1025229 10297616 NAL212_1100 Nitrosomonas sp. AL212 formate/nitrite transporter YP_004294172.1 1024426 D 153948 CDS YP_004294173.1 325981771 10297617 1025294..1025785 1 NC_015222.1 KEGG: xca:xccb100_1049 hypothetical protein; hypothetical protein 1025785 10297617 NAL212_1101 Nitrosomonas sp. AL212 hypothetical protein YP_004294173.1 1025294 D 153948 CDS YP_004294174.1 325981772 10297618 1025883..1026329 1 NC_015222.1 KEGG: nmu:Nmul_A1469 hypothetical protein; hypothetical protein 1026329 10297618 NAL212_1102 Nitrosomonas sp. AL212 hypothetical protein YP_004294174.1 1025883 D 153948 CDS YP_004294175.1 325981773 10297619 1026313..1026930 1 NC_015222.1 KEGG: nmu:Nmul_A1468 hypothetical protein; hypothetical protein 1026930 10297619 NAL212_1103 Nitrosomonas sp. AL212 hypothetical protein YP_004294175.1 1026313 D 153948 CDS YP_004294176.1 325981774 10297620 complement(1027048..1027776) 1 NC_015222.1 TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; KEGG: net:Neut_2082 two component transcriptional regulator, winged helix family protein; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator PhoB 1027776 10297620 NAL212_1104 Nitrosomonas sp. AL212 winged helix family two component transcriptional regulator PhoB YP_004294176.1 1027048 R 153948 CDS YP_004294177.1 325981775 10297621 complement(1028072..1029898) 1 NC_015222.1 TIGRFAM: Oxaloacetate decarboxylase, alpha subunit; KEGG: alv:Alvin_1668 oxaloacetate decarboxylase alpha subunit; PFAM: Carboxylase, conserved domain; Pyruvate carboxyltransferase; Biotin/lipoyl attachment; oxaloacetate decarboxylase subunit alpha 1029898 10297621 NAL212_1105 Nitrosomonas sp. AL212 oxaloacetate decarboxylase subunit alpha YP_004294177.1 1028072 R 153948 CDS YP_004294178.1 325981776 10297622 complement(1029928..1031349) 1 NC_015222.1 SMART: Biotin carboxylase, C-terminal; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; KEGG: alv:Alvin_1669 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase, large subunit, N-terminal; acetyl-CoA carboxylase, biotin carboxylase 1031349 10297622 NAL212_1106 Nitrosomonas sp. AL212 acetyl-CoA carboxylase, biotin carboxylase YP_004294178.1 1029928 R 153948 CDS YP_004294179.1 325981777 10297623 1031640..1032911 1 NC_015222.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: tmz:Tmz1t_1906 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; O-acetylhomoserine/O-acetylserine sulfhydrylase 1032911 10297623 NAL212_1107 Nitrosomonas sp. AL212 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_004294179.1 1031640 D 153948 CDS YP_004294180.1 325981778 10297624 complement(1032977..1033384) 1 NC_015222.1 PFAM: SEC-C motif; KEGG: dar:Daro_3857 SecC motif-containing protein; SEC-C motif domain-containing protein 1033384 10297624 NAL212_1108 Nitrosomonas sp. AL212 SEC-C motif domain-containing protein YP_004294180.1 1032977 R 153948 CDS YP_004294181.1 325981779 10297625 1033452..1034606 1 NC_015222.1 KEGG: app:CAP2UW1_3691 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like; DNA-directed DNA polymerase 1034606 10297625 NAL212_1109 Nitrosomonas sp. AL212 DNA-directed DNA polymerase YP_004294181.1 1033452 D 153948 CDS YP_004294182.1 325981780 10297626 1034688..1035353 1 NC_015222.1 KEGG: mfa:Mfla_2030 abortive infection protein; TIGRFAM: Prenyl protease-related; PFAM: Abortive infection protein; CAAX prenyl protease-like protein 1035353 10297626 NAL212_1110 Nitrosomonas sp. AL212 CAAX prenyl protease-like protein YP_004294182.1 1034688 D 153948 CDS YP_004294183.1 325981781 10297627 complement(1035392..1036111) 1 NC_015222.1 PFAM: Type IV pilus assembly PilZ; KEGG: slt:Slit_1652 type IV pilus assembly PilZ; type IV pilus assembly PilZ 1036111 10297627 NAL212_1111 Nitrosomonas sp. AL212 type IV pilus assembly PilZ YP_004294183.1 1035392 R 153948 CDS YP_004294184.1 325981782 10297628 1036607..1037989 1 NC_015222.1 PFAM: Protein of unknown function DUF1597; KEGG: nmu:Nmul_A0439 hypothetical protein; hypothetical protein 1037989 10297628 NAL212_1112 Nitrosomonas sp. AL212 hypothetical protein YP_004294184.1 1036607 D 153948 CDS YP_004294185.1 325981783 10297629 complement(1038064..1038921) 1 NC_015222.1 KEGG: nmu:Nmul_A1976 pseudouridine synthase, RluD; TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RluA family pseudouridine synthase 1038921 10297629 NAL212_1113 Nitrosomonas sp. AL212 RluA family pseudouridine synthase YP_004294185.1 1038064 R 153948 CDS YP_004294186.1 325981784 10297630 1039073..1039879 1 NC_015222.1 KEGG: nmu:Nmul_A1975 TPR repeat-containing protein; manually curated; TIGRFAM: Outer membrane assembly lipoprotein YfiO; outer membrane assembly lipoprotein YfiO 1039879 10297630 NAL212_1114 Nitrosomonas sp. AL212 outer membrane assembly lipoprotein YfiO YP_004294186.1 1039073 D 153948 CDS YP_004294187.1 325981785 10297631 complement(1040051..1040494) 1 NC_015222.1 PFAM: UspA; KEGG: net:Neut_2476 UspA domain-containing protein; UspA domain-containing protein 1040494 10297631 NAL212_1115 Nitrosomonas sp. AL212 UspA domain-containing protein YP_004294187.1 1040051 R 153948 CDS YP_004294188.1 325981786 10297632 complement(1040599..1041474) 1 NC_015222.1 KEGG: nmu:Nmul_A1494 esterase/lipase/thioesterase family protein; esterase/lipase/thioesterase family protein 1041474 10297632 NAL212_1116 Nitrosomonas sp. AL212 esterase/lipase/thioesterase family protein YP_004294188.1 1040599 R 153948 CDS YP_004294189.1 325981787 10297633 complement(1041495..1042043) 1 NC_015222.1 PFAM: FecR protein; KEGG: nmu:Nmul_A1046 Fe2+-dicitrate sensor membrane component-like; FecR protein 1042043 10297633 NAL212_1117 Nitrosomonas sp. AL212 FecR protein YP_004294189.1 1041495 R 153948 CDS YP_004294190.1 325981788 10297634 1042186..1043184 1 NC_015222.1 KEGG: lch:Lcho_3567 hypothetical protein; hypothetical protein 1043184 10297634 NAL212_1118 Nitrosomonas sp. AL212 hypothetical protein YP_004294190.1 1042186 D 153948 CDS YP_004294191.1 325981789 10297635 complement(1043401..1044198) 1 NC_015222.1 KEGG: dar:Daro_2798 response regulator receiver; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; response regulator receiver protein 1044198 10297635 NAL212_1119 Nitrosomonas sp. AL212 response regulator receiver protein YP_004294191.1 1043401 R 153948 CDS YP_004294192.1 325981790 10297636 complement(1044727..1045611) 1 NC_015222.1 KEGG: nmu:Nmul_A2195 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; prephenate dehydrogenase 1045611 10297636 NAL212_1120 Nitrosomonas sp. AL212 prephenate dehydrogenase YP_004294192.1 1044727 R 153948 CDS YP_004294193.1 325981791 10297637 complement(1045637..1046755) 1 NC_015222.1 TIGRFAM: Histidinol-phosphate aminotransferase; KEGG: nmu:Nmul_A2193 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/classII; histidinol-phosphate aminotransferase 1046755 10297637 NAL212_1121 Nitrosomonas sp. AL212 histidinol-phosphate aminotransferase YP_004294193.1 1045637 R 153948 CDS YP_004294194.1 325981792 10297638 complement(1046833..1047903) 1 NC_015222.1 TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; PFAM: Prephenate dehydratase; Amino acid-binding ACT; Chorismate mutase, type II; KEGG: neu:NE0335 prephenate dehydratase/chorismate mutase; SMART: Chorismate mutase; chorismate mutase 1047903 10297638 NAL212_1122 Nitrosomonas sp. AL212 chorismate mutase YP_004294194.1 1046833 R 153948 CDS YP_004294195.1 325981793 10297639 complement(1047944..1049140) 1 NC_015222.1 KEGG: nmu:Nmul_A2191 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; phosphoglycerate dehydrogenase 1049140 10297639 NAL212_1123 Nitrosomonas sp. AL212 phosphoglycerate dehydrogenase YP_004294195.1 1047944 R 153948 CDS YP_004294196.1 325981794 10297640 complement(1049133..1050224) 1 NC_015222.1 TIGRFAM: Phosphoserine aminotransferase, subgroup; KEGG: nmu:Nmul_A2190 phosphoserine aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase; phosphoserine aminotransferase 1050224 10297640 NAL212_1124 Nitrosomonas sp. AL212 phosphoserine aminotransferase YP_004294196.1 1049133 R 153948 CDS YP_004294197.1 325981795 10297641 complement(1050257..1052815) 1 NC_015222.1 SMART: DNA topoisomerase, type IIA, subunit A/C-terminal; TIGRFAM: DNA gyrase, subunit A; KEGG: nmu:Nmul_A2189 DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; DNA gyrase subunit A 1052815 10297641 NAL212_1125 Nitrosomonas sp. AL212 DNA gyrase subunit A YP_004294197.1 1050257 R 153948 CDS YP_004294198.1 325981796 10297642 1053123..1054283 1 NC_015222.1 TIGRFAM: Acetylornithine/succinylornithine aminotransferase; KEGG: nmu:Nmul_A1041 acetylornithine aminotransferase; PFAM: Aminotransferase class-III; acetylornithine and succinylornithine aminotransferase 1054283 10297642 NAL212_1126 Nitrosomonas sp. AL212 acetylornithine and succinylornithine aminotransferase YP_004294198.1 1053123 D 153948 CDS YP_004294199.1 325981797 10297643 1054328..1055254 1 NC_015222.1 TIGRFAM: Ornithine carbamoyltransferase; KEGG: net:Neut_2066 ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; ornithine carbamoyltransferase 1055254 10297643 NAL212_1127 Nitrosomonas sp. AL212 ornithine carbamoyltransferase YP_004294199.1 1054328 D 153948 CDS YP_004294200.1 325981798 10297644 1055330..1056544 1 NC_015222.1 TIGRFAM: Argininosuccinate synthase; KEGG: nmu:Nmul_A1043 argininosuccinate synthase; PFAM: Argininosuccinate synthase; argininosuccinate synthase 1056544 10297644 NAL212_1128 Nitrosomonas sp. AL212 argininosuccinate synthase YP_004294200.1 1055330 D 153948 CDS YP_004294201.1 325981799 10297645 1056739..1057224 1 NC_015222.1 PFAM: Protein of unknown function DUF520; KEGG: nmu:Nmul_A1044 putative nucleotide-binding protein; hypothetical protein 1057224 10297645 NAL212_1129 Nitrosomonas sp. AL212 hypothetical protein YP_004294201.1 1056739 D 153948 CDS YP_004294202.1 325981800 10297646 1057511..1057888 1 NC_015222.1 KEGG: nmu:Nmul_A0762 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacteria; PFAM: Ribosomal protein S12/S23; 30S ribosomal protein S12 1057888 10297646 NAL212_1130 Nitrosomonas sp. AL212 30S ribosomal protein S12 YP_004294202.1 1057511 D 153948 CDS YP_004294203.1 325981801 10297647 1057987..1058457 1 NC_015222.1 KEGG: neu:NE2054 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7; 30S ribosomal protein S7 1058457 10297647 NAL212_1131 Nitrosomonas sp. AL212 30S ribosomal protein S7 YP_004294203.1 1057987 D 153948 CDS YP_004294204.1 325981802 10297648 1058514..1060604 1 NC_015222.1 TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; KEGG: nmu:Nmul_A0764 elongation factor G; SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; translation elongation factor G 1060604 10297648 NAL212_1132 Nitrosomonas sp. AL212 translation elongation factor G YP_004294204.1 1058514 D 153948 CDS YP_004294205.1 325981803 10297649 1060636..1061826 1 NC_015222.1 KEGG: neu:NE2052 elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; translation elongation factor Tu 1061826 10297649 NAL212_1133 Nitrosomonas sp. AL212 translation elongation factor Tu YP_004294205.1 1060636 D 153948 CDS YP_004294206.1 325981804 10297650 1061910..1062218 1 NC_015222.1 KEGG: neu:NE0400 30S ribosomal protein S10; TIGRFAM: Ribosomal protein S10 subgroup; PFAM: Ribosomal protein S10; 30S ribosomal protein S10 1062218 10297650 NAL212_1134 Nitrosomonas sp. AL212 30S ribosomal protein S10 YP_004294206.1 1061910 D 153948 CDS YP_004294207.1 325981805 10297651 1062302..1062949 1 NC_015222.1 KEGG: nmu:Nmul_A0767 ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3; 50S ribosomal protein L3 1062949 10297651 NAL212_1135 Nitrosomonas sp. AL212 50S ribosomal protein L3 YP_004294207.1 1062302 D 153948 CDS YP_004294208.1 325981806 10297652 1062991..1063611 1 NC_015222.1 PFAM: Ribosomal protein L4/L1e; KEGG: nmu:Nmul_A0768 50S ribosomal protein L4; 50S ribosomal protein L4/L1e 1063611 10297652 NAL212_1136 Nitrosomonas sp. AL212 50S ribosomal protein L4/L1e YP_004294208.1 1062991 D 153948 CDS YP_004294209.1 325981807 10297653 1063608..1063943 1 NC_015222.1 PFAM: Ribosomal protein L25/L23; KEGG: nmu:Nmul_A0769 ribosomal L23 protein; 50S ribosomal protein L25/L23 1063943 10297653 NAL212_1137 Nitrosomonas sp. AL212 50S ribosomal protein L25/L23 YP_004294209.1 1063608 D 153948 CDS YP_004294210.1 325981808 10297654 1063943..1064776 1 NC_015222.1 KEGG: nmu:Nmul_A0770 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal protein L2, C-terminal; Ribosomal Proteins L2, RNA binding domain; 50S ribosomal protein L2 1064776 10297654 NAL212_1138 Nitrosomonas sp. AL212 50S ribosomal protein L2 YP_004294210.1 1063943 D 153948 CDS YP_004294211.1 325981809 10297655 1064781..1065062 1 NC_015222.1 KEGG: gca:Galf_0562 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19/S15; 30S ribosomal protein S19 1065062 10297655 NAL212_1139 Nitrosomonas sp. AL212 30S ribosomal protein S19 YP_004294211.1 1064781 D 153948 CDS YP_004294212.1 325981810 10297656 1065072..1065428 1 NC_015222.1 KEGG: nmu:Nmul_A0772 ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22/L17; 50S ribosomal protein L22 1065428 10297656 NAL212_1140 Nitrosomonas sp. AL212 50S ribosomal protein L22 YP_004294212.1 1065072 D 153948 CDS YP_004294213.1 325981811 10297657 1065434..1066252 1 NC_015222.1 TIGRFAM: Ribosomal protein S3, bacterial; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; KEGG: nmu:Nmul_A0773 30S ribosomal protein S3; SMART: K Homology; 30S ribosomal protein S3 1066252 10297657 NAL212_1141 Nitrosomonas sp. AL212 30S ribosomal protein S3 YP_004294213.1 1065434 D 153948 CDS YP_004294214.1 325981812 10297658 1066271..1066687 1 NC_015222.1 KEGG: bpy:Bphyt_3637 50S ribosomal protein L16; TIGRFAM: Ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; 50S ribosomal protein L16 1066687 10297658 NAL212_1142 Nitrosomonas sp. AL212 50S ribosomal protein L16 YP_004294214.1 1066271 D 153948 CDS YP_004294215.1 325981813 10297659 1066691..1066894 1 NC_015222.1 KEGG: bgl:bglu_1g02660 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29; 50S ribosomal protein L29 1066894 10297659 NAL212_1143 Nitrosomonas sp. AL212 50S ribosomal protein L29 YP_004294215.1 1066691 D 153948 CDS YP_004294216.1 325981814 10297660 1066881..1067126 1 NC_015222.1 KEGG: nmu:Nmul_A0776 ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17; 30S ribosomal protein S17 1067126 10297660 NAL212_1144 Nitrosomonas sp. AL212 30S ribosomal protein S17 YP_004294216.1 1066881 D 153948 CDS YP_004294217.1 325981815 10297661 1067294..1067662 1 NC_015222.1 KEGG: nmu:Nmul_A0777 ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; PFAM: Ribosomal protein L14b/L23e; 50S ribosomal protein L14 1067662 10297661 NAL212_1145 Nitrosomonas sp. AL212 50S ribosomal protein L14 YP_004294217.1 1067294 D 153948 CDS YP_004294218.1 325981816 10297662 1067681..1067998 1 NC_015222.1 TIGRFAM: Ribosomal protein L24; PFAM: KOW; KEGG: dar:Daro_0330 50S ribosomal protein L24; SMART: KOW; 50S ribosomal protein L24 1067998 10297662 NAL212_1146 Nitrosomonas sp. AL212 50S ribosomal protein L24 YP_004294218.1 1067681 D 153948 CDS YP_004294219.1 325981817 10297663 1068017..1068556 1 NC_015222.1 PFAM: Ribosomal protein L5; KEGG: nmu:Nmul_A0779 50S ribosomal protein L5; 50S ribosomal protein L5 1068556 10297663 NAL212_1147 Nitrosomonas sp. AL212 50S ribosomal protein L5 YP_004294219.1 1068017 D 153948 CDS YP_004294220.1 325981818 10297664 1068564..1068869 1 NC_015222.1 PFAM: Ribosomal protein S14; KEGG: nmu:Nmul_A0780 ribosomal protein S14; 30S ribosomal protein S14 1068869 10297664 NAL212_1148 Nitrosomonas sp. AL212 30S ribosomal protein S14 YP_004294220.1 1068564 D 153948 CDS YP_004294221.1 325981819 10297665 1068946..1069341 1 NC_015222.1 PFAM: Ribosomal protein S8; KEGG: nmu:Nmul_A0781 ribosomal protein S8; 30S ribosomal protein S8 1069341 10297665 NAL212_1149 Nitrosomonas sp. AL212 30S ribosomal protein S8 YP_004294221.1 1068946 D 153948 CDS YP_004294222.1 325981820 10297666 1069354..1069887 1 NC_015222.1 KEGG: nmu:Nmul_A0782 ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6, alpha-beta domain; 50S ribosomal protein L6 1069887 10297666 NAL212_1150 Nitrosomonas sp. AL212 50S ribosomal protein L6 YP_004294222.1 1069354 D 153948 CDS YP_004294223.1 325981821 10297667 1069898..1070254 1 NC_015222.1 KEGG: nmu:Nmul_A0783 ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal protein L18/L5; 50S ribosomal protein L18 1070254 10297667 NAL212_1151 Nitrosomonas sp. AL212 50S ribosomal protein L18 YP_004294223.1 1069898 D 153948 CDS YP_004294224.1 325981822 10297668 1070268..1070798 1 NC_015222.1 KEGG: nmu:Nmul_A0784 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, C-terminal; Ribosomal protein S5, N-terminal; 30S ribosomal protein S5 1070798 10297668 NAL212_1152 Nitrosomonas sp. AL212 30S ribosomal protein S5 YP_004294224.1 1070268 D 153948 CDS YP_004294225.1 325981823 10297669 1070805..1070996 1 NC_015222.1 KEGG: dia:Dtpsy_0391 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30, ferredoxin-like fold domain; 50S ribosomal protein L30 1070996 10297669 NAL212_1153 Nitrosomonas sp. AL212 50S ribosomal protein L30 YP_004294225.1 1070805 D 153948 CDS YP_004294226.1 325981824 10297670 1070998..1071429 1 NC_015222.1 KEGG: mei:Msip34_0321 ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; PFAM: Ribosomal protein L18e/L15; 50S ribosomal protein L15 1071429 10297670 NAL212_1154 Nitrosomonas sp. AL212 50S ribosomal protein L15 YP_004294226.1 1070998 D 153948 CDS YP_004294227.1 325981825 10297671 1071447..1072778 1 NC_015222.1 KEGG: nmu:Nmul_A0787 preprotein translocase subunit SecY; TIGRFAM: SecY protein; PFAM: SecY protein; preprotein translocase subunit SecY 1072778 10297671 NAL212_1155 Nitrosomonas sp. AL212 preprotein translocase subunit SecY YP_004294227.1 1071447 D 153948 CDS YP_004294228.1 325981826 10297672 1072798..1073016 1 NC_015222.1 TIGRFAM: Translation initiation factor IF-1; PFAM: RNA-binding domain, S1, IF1 type; KEGG: nmu:Nmul_A0788 translation initiation factor IF-1; SMART: RNA-binding domain, S1; translation initiation factor IF-1 1073016 10297672 NAL212_1156 Nitrosomonas sp. AL212 translation initiation factor IF-1 YP_004294228.1 1072798 D 153948 CDS YP_004294229.1 325981827 10297673 1073226..1073585 1 NC_015222.1 KEGG: nmu:Nmul_A0789 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13; 30S ribosomal protein S13 1073585 10297673 NAL212_1157 Nitrosomonas sp. AL212 30S ribosomal protein S13 YP_004294229.1 1073226 D 153948 CDS YP_004294230.1 325981828 10297674 1073621..1074010 1 NC_015222.1 KEGG: nmu:Nmul_A0790 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; PFAM: Ribosomal protein S11; 30S ribosomal protein S11 1074010 10297674 NAL212_1158 Nitrosomonas sp. AL212 30S ribosomal protein S11 YP_004294230.1 1073621 D 153948 CDS YP_004294231.1 325981829 10297675 1074023..1074649 1 NC_015222.1 TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: Ribosomal protein S4/S9, N-terminal; RNA-binding S4; KEGG: nmu:Nmul_A0791 30S ribosomal protein S4; SMART: RNA-binding S4; 30S ribosomal protein S4 1074649 10297675 NAL212_1159 Nitrosomonas sp. AL212 30S ribosomal protein S4 YP_004294231.1 1074023 D 153948 CDS YP_004294232.1 325981830 10297676 1074696..1075703 1 NC_015222.1 TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase, alpha subunit, C-terminal; DNA-directed RNA polymerase, insert domain; DNA-directed RNA polymerase, dimerisation; KEGG: nmu:Nmul_A0792 DNA-directed RNA polymerase subunit alpha; SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; DNA-directed RNA polymerase subunit alpha 1075703 10297676 NAL212_1160 Nitrosomonas sp. AL212 DNA-directed RNA polymerase subunit alpha YP_004294232.1 1074696 D 153948 CDS YP_004294233.1 325981831 10297677 1075690..1076091 1 NC_015222.1 KEGG: nmu:Nmul_A0793 ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17; 50S ribosomal protein L17 1076091 10297677 NAL212_1161 Nitrosomonas sp. AL212 50S ribosomal protein L17 YP_004294233.1 1075690 D 153948 CDS YP_004294234.1 325981832 10297678 1076161..1077156 1 NC_015222.1 TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; KEGG: meh:M301_1880 biotin/acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; Biotin protein ligase, C-terminal; biotin-(acetyl-CoA carboxylase) ligase 1077156 10297678 NAL212_1162 Nitrosomonas sp. AL212 biotin-(acetyl-CoA carboxylase) ligase YP_004294234.1 1076161 D 153948 CDS YP_004294235.1 325981833 10297679 1077163..1077927 1 NC_015222.1 KEGG: nmu:Nmul_A2081 pantothenate kinase; TIGRFAM: Type III pantothenate kinase; PFAM: Type III pantothenate kinase; putative Baf family transcriptional acitvator 1077927 10297679 NAL212_1163 Nitrosomonas sp. AL212 putative Baf family transcriptional acitvator YP_004294235.1 1077163 D 153948 CDS YP_004294236.1 325981834 10297680 1077930..1078526 1 NC_015222.1 KEGG: nmu:Nmul_A2080 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; PFAM: GTP-binding protein, HSR1-related; ribosome biogenesis GTP-binding protein YsxC 1078526 10297680 NAL212_1164 Nitrosomonas sp. AL212 ribosome biogenesis GTP-binding protein YsxC YP_004294236.1 1077930 D 153948 CDS YP_004294237.1 325981835 10297681 1078731..1079735 1 NC_015222.1 KEGG: neu:NE2457 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; porphobilinogen synthase 1079735 10297681 NAL212_1165 Nitrosomonas sp. AL212 porphobilinogen synthase YP_004294237.1 1078731 D 153948 CDS YP_004294238.1 325981836 10297682 complement(1079765..1082083) 1 NC_015222.1 KEGG: net:Neut_1808 penicillin-binding protein, 1A family protein; TIGRFAM: Penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; penicillin-binding protein 1082083 10297682 NAL212_1166 Nitrosomonas sp. AL212 penicillin-binding protein YP_004294238.1 1079765 R 153948 CDS YP_004294239.1 325981837 10297683 1082315..1083418 1 NC_015222.1 TIGRFAM: Type IV pilus assembly protein PilM; KEGG: slt:Slit_0108 type IV pilus assembly protein PilM; type IV pilus assembly protein PilM 1083418 10297683 NAL212_1167 Nitrosomonas sp. AL212 type IV pilus assembly protein PilM YP_004294239.1 1082315 D 153948 CDS YP_004294240.1 325981838 10297684 1083415..1083999 1 NC_015222.1 PFAM: Fimbrial assembly; KEGG: neu:NE2315 putative type 4 fimbrial biogenesis protein PilN; fimbrial assembly family protein 1083999 10297684 NAL212_1168 Nitrosomonas sp. AL212 fimbrial assembly family protein YP_004294240.1 1083415 D 153948 CDS YP_004294241.1 325981839 10297685 1084017..1084631 1 NC_015222.1 KEGG: neu:NE2314 putative fimbrial type-4 assembly membrane transmembrane protein; putative fimbrial type-4 assembly membrane transmembrane protein 1084631 10297685 NAL212_1169 Nitrosomonas sp. AL212 putative fimbrial type-4 assembly membrane transmembrane protein YP_004294241.1 1084017 D 153948 CDS YP_004294242.1 325981840 10297686 1084635..1085153 1 NC_015222.1 PFAM: Pilus assembly protein PilP; KEGG: net:Neut_1804 pilus assembly protein, PilQ; Pilus assembly protein PilP 1085153 10297686 NAL212_1170 Nitrosomonas sp. AL212 Pilus assembly protein PilP YP_004294242.1 1084635 D 153948 CDS YP_004294243.1 325981841 10297687 1085185..1087281 1 NC_015222.1 TIGRFAM: Type IV pilus secretin PilQ; PFAM: Type II/III secretion system; Secretin/TonB, short N-terminal; KEGG: net:Neut_1803 type IV pilus secretin PilQ; SMART: Secretin/TonB, short N-terminal; type IV pilus secretin PilQ 1087281 10297687 NAL212_1171 Nitrosomonas sp. AL212 type IV pilus secretin PilQ YP_004294243.1 1085185 D 153948 CDS YP_004294244.1 325981842 10297688 complement(1087288..1087752) 1 NC_015222.1 KEGG: nmu:Nmul_A1127 tRNA/rRNA methyltransferase (SpoU); TIGRFAM: RNA methyltransferase TrmH, group 2; PFAM: tRNA/rRNA methyltransferase, SpoU; TrmH family RNA methyltransferase 1087752 10297688 NAL212_1172 Nitrosomonas sp. AL212 TrmH family RNA methyltransferase YP_004294244.1 1087288 R 153948 CDS YP_004294245.1 325981843 10297689 complement(1087774..1088460) 1 NC_015222.1 PFAM: Phosphoribosyltransferase; KEGG: nmu:Nmul_A1128 phosphoribosyltransferase; phosphoribosyltransferase 1088460 10297689 NAL212_1173 Nitrosomonas sp. AL212 phosphoribosyltransferase YP_004294245.1 1087774 R 153948 CDS YP_004294246.1 325981844 10297690 1088593..1089603 1 NC_015222.1 SMART: Biotin/thiamin synthesis-associated protein; Elongator protein 3/MiaB/NifB; TIGRFAM: Biotin synthase; KEGG: neu:NE2300 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; biotin synthase 1089603 10297690 NAL212_1174 Nitrosomonas sp. AL212 biotin synthase YP_004294246.1 1088593 D 153948 CDS YP_004294247.1 325981845 10297691 1089604..1090770 1 NC_015222.1 TIGRFAM: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; KEGG: net:Neut_2137 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/classII; 8-amino-7-oxononanoate synthase 1090770 10297691 NAL212_1175 Nitrosomonas sp. AL212 8-amino-7-oxononanoate synthase YP_004294247.1 1089604 D 153948 CDS YP_004294248.1 325981846 10297692 1090767..1091537 1 NC_015222.1 TIGRFAM: Carboxylesterase BioH; KEGG: neu:NE2298 biotin biosynthesis protein BioH; PFAM: Alpha/beta hydrolase fold-1; bioH protein 1091537 10297692 NAL212_1176 Nitrosomonas sp. AL212 bioH protein YP_004294248.1 1090767 D 153948 CDS YP_004294249.1 325981847 10297693 1091515..1092396 1 NC_015222.1 KEGG: nmu:Nmul_A1132 biotin biosynthesis protein BioC; TIGRFAM: Biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; biotin biosynthesis protein BioC 1092396 10297693 NAL212_1177 Nitrosomonas sp. AL212 biotin biosynthesis protein BioC YP_004294249.1 1091515 D 153948 CDS YP_004294250.1 325981848 10297694 1092398..1093081 1 NC_015222.1 KEGG: nmu:Nmul_A1133 dithiobiotin synthetase; TIGRFAM: Dethiobiotin synthase; PFAM: Cobyrinic acid a,c-diamide synthase; dethiobiotin synthase 1093081 10297694 NAL212_1178 Nitrosomonas sp. AL212 dethiobiotin synthase YP_004294250.1 1092398 D 153948 CDS YP_004294251.1 325981849 10297695 1093145..1093849 1 NC_015222.1 KEGG: azo:azo2627 hypothetical protein; hypothetical protein 1093849 10297695 NAL212_1179 Nitrosomonas sp. AL212 hypothetical protein YP_004294251.1 1093145 D 153948 CDS YP_004294252.1 325981850 10297696 1093869..1094165 1 NC_015222.1 PFAM: Protein of unknown function DUF3175; KEGG: rva:Rvan_2708 hypothetical protein; hypothetical protein 1094165 10297696 NAL212_1180 Nitrosomonas sp. AL212 hypothetical protein YP_004294252.1 1093869 D 153948 CDS YP_004294253.1 325981851 10297697 1094209..1094847 1 NC_015222.1 KEGG: sna:Snas_5583 transcriptional regulator, AsnC family; hypothetical protein 1094847 10297697 NAL212_1181 Nitrosomonas sp. AL212 hypothetical protein YP_004294253.1 1094209 D 153948 CDS YP_004294254.1 325981852 10297698 complement(1094948..1095703) 1 NC_015222.1 KEGG: bja:bll4865 putative carbonic anhydrase; PFAM: Carbonic anhydrase; SMART: Carbonic anhydrase; carbonic anhydrase 1095703 10297698 NAL212_1182 Nitrosomonas sp. AL212 carbonic anhydrase YP_004294254.1 1094948 R 153948 CDS YP_004294255.1 325981853 10297699 1095894..1097132 1 NC_015222.1 KEGG: reu:Reut_A3452 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 28; UDP-glucuronosyl/UDP-glucosyltransferase; Sterol 3-beta-glucosyltransferase 1097132 10297699 NAL212_1183 Nitrosomonas sp. AL212 Sterol 3-beta-glucosyltransferase YP_004294255.1 1095894 D 153948 CDS YP_004294256.1 325981854 10297700 1097177..1097866 1 NC_015222.1 PFAM: ThiJ/PfpI; KEGG: neu:NE2259 ThiJ/PfpI family protein; ThiJ/PfpI domain-containing protein 1097866 10297700 NAL212_1184 Nitrosomonas sp. AL212 ThiJ/PfpI domain-containing protein YP_004294256.1 1097177 D 153948 CDS YP_004294257.1 325981855 10297701 1097961..1098560 1 NC_015222.1 KEGG: alv:Alvin_1116 hypothetical protein; hypothetical protein 1098560 10297701 NAL212_1185 Nitrosomonas sp. AL212 hypothetical protein YP_004294257.1 1097961 D 153948 CDS YP_004294258.1 325981856 10297702 1098669..1099628 1 NC_015222.1 KEGG: sro:Sros_8312 hypothetical protein; hypothetical protein 1099628 10297702 NAL212_1186 Nitrosomonas sp. AL212 hypothetical protein YP_004294258.1 1098669 D 153948 CDS YP_004294259.1 325981857 10297703 1099663..1099875 1 NC_015222.1 KEGG: vsa:VSAL_II0890 hypothetical protein; hypothetical protein 1099875 10297703 NAL212_1187 Nitrosomonas sp. AL212 hypothetical protein YP_004294259.1 1099663 D 153948 CDS YP_004294260.1 325981858 10297704 1099879..1100262 1 NC_015222.1 KEGG: dap:Dacet_1288 hypothetical protein; hypothetical protein 1100262 10297704 NAL212_1188 Nitrosomonas sp. AL212 hypothetical protein YP_004294260.1 1099879 D 153948 CDS YP_004294261.1 325981859 10297705 complement(1100318..1101568) 1 NC_015222.1 KEGG: net:Neut_2126 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; Metal-dependent hydrolase HDOD; SMART: Diguanylate phosphodiesterase, EAL domain; diguanylate phosphodiesterase metal dependent hydrolase domain 1101568 10297705 NAL212_1189 Nitrosomonas sp. AL212 diguanylate phosphodiesterase metal dependent hydrolase domain YP_004294261.1 1100318 R 153948 CDS YP_004294262.1 325981860 10297706 1101788..1102720 1 NC_015222.1 PFAM: Abortive infection protein; KEGG: sli:Slin_5619 hypothetical protein; Abortive infection protein 1102720 10297706 NAL212_1190 Nitrosomonas sp. AL212 Abortive infection protein YP_004294262.1 1101788 D 153948 CDS YP_004294263.1 325981861 10297707 1103073..1103621 1 NC_015222.1 PFAM: CHRD; KEGG: ppm:PPSC2_c2409 CHRD domain containing protein; CHRD domain-containing protein 1103621 10297707 NAL212_1191 Nitrosomonas sp. AL212 CHRD domain-containing protein YP_004294263.1 1103073 D 153948 CDS YP_004294264.1 325981862 10297708 1103920..1104291 1 NC_015222.1 PFAM: Putative thiol-disulphide oxidoreductase DCC; KEGG: ppr:PBPRB0254 hypothetical protein; thiol-disulfide oxidoreductase DCC 1104291 10297708 NAL212_1192 Nitrosomonas sp. AL212 thiol-disulfide oxidoreductase DCC YP_004294264.1 1103920 D 153948 CDS YP_004294265.1 325981863 10297709 complement(1104454..1104879) 1 NC_015222.1 KEGG: ang:An11g01740 hypothetical protein; hypothetical protein 1104879 10297709 NAL212_1193 Nitrosomonas sp. AL212 hypothetical protein YP_004294265.1 1104454 R 153948 CDS YP_004294266.1 325981864 10297710 complement(1104907..1105899) 1 NC_015222.1 PFAM: Bile acid:sodium symporter; KEGG: tgr:Tgr7_1550 bile acid:sodium symporter; bile acid:sodium symporter 1105899 10297710 NAL212_1194 Nitrosomonas sp. AL212 bile acid:sodium symporter YP_004294266.1 1104907 R 153948 CDS YP_004294267.1 325981865 10297711 complement(1105911..1106006) 1 NC_015222.1 hypothetical protein 1106006 10297711 NAL212_1195 Nitrosomonas sp. AL212 hypothetical protein YP_004294267.1 1105911 R 153948 CDS YP_004294268.1 325981866 10297712 complement(1106006..1106323) 1 NC_015222.1 PFAM: Domain of unknown function DUF190; KEGG: net:Neut_1273 hypothetical protein; hypothetical protein 1106323 10297712 NAL212_1196 Nitrosomonas sp. AL212 hypothetical protein YP_004294268.1 1106006 R 153948 CDS YP_004294269.1 325981867 10297713 complement(1106340..1106753) 1 NC_015222.1 TIGRFAM: Camphor resistance CrcB protein; HAMAP: Camphor resistance CrcB protein; KEGG: net:Neut_1274 CrcB protein; PFAM: Camphor resistance CrcB protein; CrcB-like protein 1106753 10297713 NAL212_1197 Nitrosomonas sp. AL212 CrcB-like protein YP_004294269.1 1106340 R 153948 CDS YP_004294270.1 325981868 10297714 1106870..1107586 1 NC_015222.1 PFAM: Protein of unknown function DUF81; KEGG: aca:ACP_0714 hypothetical protein; hypothetical protein 1107586 10297714 NAL212_1198 Nitrosomonas sp. AL212 hypothetical protein YP_004294270.1 1106870 D 153948 CDS YP_004294271.1 325981869 10297715 1107657..1109543 1 NC_015222.1 PFAM: Divalent ion symporter; Regulator of K+ conductance, C-terminal; KEGG: tgr:Tgr7_0867 TrkA-C domain protein; citrate transporter 1109543 10297715 NAL212_1199 Nitrosomonas sp. AL212 citrate transporter YP_004294271.1 1107657 D 153948 CDS YP_004294272.1 325981870 10297716 1109581..1111926 1 NC_015222.1 PFAM: Divalent ion symporter; Regulator of K+ conductance, C-terminal; KEGG: dat:HRM2_43470 putative di- and tricarboxylate transporter; citrate transporter 1111926 10297716 NAL212_1200 Nitrosomonas sp. AL212 citrate transporter YP_004294272.1 1109581 D 153948 CDS YP_004294273.1 325981871 10297717 complement(1111980..1112855) 1 NC_015222.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: net:Neut_1373 transcriptional regulator, LysR family protein; LysR family transcriptional regulator 1112855 10297717 NAL212_1201 Nitrosomonas sp. AL212 LysR family transcriptional regulator YP_004294273.1 1111980 R 153948 CDS YP_004294274.1 325981872 10297718 1113204..1113401 1 NC_015222.1 KEGG: lwe:lwe0218 putative secreted lipoprotein; hypothetical protein 1113401 10297718 NAL212_1202 Nitrosomonas sp. AL212 hypothetical protein YP_004294274.1 1113204 D 153948 CDS YP_004294275.1 325981873 10297719 1113623..1114522 1 NC_015222.1 KEGG: noc:Noc_0082 sulfotransferase; PFAM: Sulfotransferase domain; alcohol sulfotransferase 1114522 10297719 NAL212_1203 Nitrosomonas sp. AL212 alcohol sulfotransferase YP_004294275.1 1113623 D 153948 CDS YP_004294276.1 325981874 10297720 complement(1114932..1116437) 1 NC_015222.1 TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: net:Neut_2377 Mg chelatase, subunit ChlI; SMART: ATPase, AAA+ type, core; Mg chelatase subunit ChlI 1116437 10297720 NAL212_1204 Nitrosomonas sp. AL212 Mg chelatase subunit ChlI YP_004294276.1 1114932 R 153948 CDS YP_004294277.1 325981875 10297721 complement(1116507..1116773) 1 NC_015222.1 PFAM: Protein of unknown function DUF526; KEGG: net:Neut_2376 hypothetical protein; hypothetical protein 1116773 10297721 NAL212_1205 Nitrosomonas sp. AL212 hypothetical protein YP_004294277.1 1116507 R 153948 CDS YP_004294278.1 325981876 10297722 1116991..1117995 1 NC_015222.1 PFAM: Aminoglycoside phosphotransferase; KEGG: nmu:Nmul_A0126 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 1117995 10297722 NAL212_1206 Nitrosomonas sp. AL212 aminoglycoside phosphotransferase YP_004294278.1 1116991 D 153948 CDS YP_004294279.1 325981877 10297723 1118015..1118716 1 NC_015222.1 PFAM: Nucleotidyl transferase; KEGG: nmu:Nmul_A0127 nucleotidyl transferase; nucleotidyl transferase 1118716 10297723 NAL212_1207 Nitrosomonas sp. AL212 nucleotidyl transferase YP_004294279.1 1118015 D 153948 CDS YP_004294280.1 325981878 10297724 1118748..1120055 1 NC_015222.1 PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; KEGG: neu:NE2147 M24 family metallopeptidase; peptidase M24 1120055 10297724 NAL212_1208 Nitrosomonas sp. AL212 peptidase M24 YP_004294280.1 1118748 D 153948 CDS YP_004294281.1 325981879 10297725 1120052..1120417 1 NC_015222.1 KEGG: net:Neut_2094 hypothetical protein; hypothetical protein 1120417 10297725 NAL212_1209 Nitrosomonas sp. AL212 hypothetical protein YP_004294281.1 1120052 D 153948 CDS YP_004294282.1 325981880 10297726 complement(1120502..1122892) 1 NC_015222.1 KEGG: neu:NE1123 penicillin amidase; PFAM: Peptidase S45, penicillin amidase; acyl-homoserine-lactone acylase 1122892 10297726 NAL212_1210 Nitrosomonas sp. AL212 acyl-homoserine-lactone acylase YP_004294282.1 1120502 R 153948 CDS YP_004294283.1 325981881 10297727 1123109..1124248 1 NC_015222.1 KEGG: net:Neut_2443 flagellar biosynthesis protein FlhB; TIGRFAM: Flagellar biosynthetic protein FlhB; PFAM: Type III secretion exporter; flagellar biosynthetic protein FlhB 1124248 10297727 NAL212_1211 Nitrosomonas sp. AL212 flagellar biosynthetic protein FlhB YP_004294283.1 1123109 D 153948 CDS YP_004294284.1 325981882 10297728 1124303..1126384 1 NC_015222.1 KEGG: net:Neut_2444 flagellar biosynthesis protein FlhA; TIGRFAM: Flagellar biosynthesis protein FlhA; PFAM: Type III secretion system FHIPEP; flagellar biosynthesis protein FlhA 1126384 10297728 NAL212_1212 Nitrosomonas sp. AL212 flagellar biosynthesis protein FlhA YP_004294284.1 1124303 D 153948 CDS YP_004294285.1 325981883 10297729 1126381..1127682 1 NC_015222.1 TIGRFAM: Signal-recognition particle (SRP)-type GTPase; PFAM: Signal recognition particle, SRP54 subunit, GTPase; KEGG: neu:NE2489 flagellar biosynthesis regulator FlhF; SMART: Signal recognition particle, SRP54 subunit, GTPase; ATPase, AAA+ type, core; flagellar biosynthetic protein FlhF 1127682 10297729 NAL212_1213 Nitrosomonas sp. AL212 flagellar biosynthetic protein FlhF YP_004294285.1 1126381 D 153948 CDS YP_004294286.1 325981884 10297730 1127675..1128571 1 NC_015222.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: neu:NE2490 putative MinD-related protein; Cobyrinic acid ac-diamide synthase 1128571 10297730 NAL212_1214 Nitrosomonas sp. AL212 Cobyrinic acid ac-diamide synthase YP_004294286.1 1127675 D 153948 CDS YP_004294287.1 325981885 10297731 1128577..1129293 1 NC_015222.1 KEGG: net:Neut_2447 RNA polymerase, sigma 28 subunit; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma 28 subunit FliA/WhiG 1129293 10297731 NAL212_1215 Nitrosomonas sp. AL212 RNA polymerase sigma 28 subunit FliA/WhiG YP_004294287.1 1128577 D 153948 CDS YP_004294288.1 325981886 10297732 1129339..1130097 1 NC_015222.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: dar:Daro_0744 flagellar motor protein; MotA/TolQ/ExbB proton channel 1130097 10297732 NAL212_1216 Nitrosomonas sp. AL212 MotA/TolQ/ExbB proton channel YP_004294288.1 1129339 D 153948 CDS YP_004294289.1 325981887 10297733 1130134..1130928 1 NC_015222.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: nmu:Nmul_A1315 flagellar motor protein MotD; OmpA/MotB domain-containing protein 1130928 10297733 NAL212_1217 Nitrosomonas sp. AL212 OmpA/MotB domain-containing protein YP_004294289.1 1130134 D 153948 CDS YP_004294290.1 325981888 10297734 complement(1131040..1131504) 1 NC_015222.1 PFAM: FlgN-like domain; KEGG: net:Neut_2438 FlgN family protein; FlgN family protein 1131504 10297734 NAL212_1218 Nitrosomonas sp. AL212 FlgN family protein YP_004294290.1 1131040 R 153948 CDS YP_004294291.1 325981889 10297735 complement(1131504..1131809) 1 NC_015222.1 KEGG: neu:NE2478 hypothetical protein; TIGRFAM: Anti-sigma-28 factor, FlgM; PFAM: Anti-sigma-28 factor, FlgM; flagellar biosynthesis anti-sigma factor protein FlgM 1131809 10297735 NAL212_1219 Nitrosomonas sp. AL212 flagellar biosynthesis anti-sigma factor protein FlgM YP_004294291.1 1131504 R 153948 CDS YP_004294292.1 325981890 10297736 1132028..1132795 1 NC_015222.1 PFAM: Uncharacterised protein family CysZ; KEGG: nmu:Nmul_A1878 transmembrane protein; hypothetical protein 1132795 10297736 NAL212_1220 Nitrosomonas sp. AL212 hypothetical protein YP_004294292.1 1132028 D 153948 CDS YP_004294293.1 325981891 10297737 1132942..1133673 1 NC_015222.1 PFAM: Protein of unknown function DUF3025; KEGG: gca:Galf_1122 hypothetical protein; hypothetical protein 1133673 10297737 NAL212_1221 Nitrosomonas sp. AL212 hypothetical protein YP_004294293.1 1132942 D 153948 CDS YP_004294294.1 325981892 10297738 1133737..1133907 1 NC_015222.1 hypothetical protein 1133907 10297738 NAL212_1222 Nitrosomonas sp. AL212 hypothetical protein YP_004294294.1 1133737 D 153948 CDS YP_004294295.1 325981893 10297739 1134231..1134656 1 NC_015222.1 PFAM: Nucleoside diphosphate kinase; KEGG: bpr:GBP346_A2301 nucleoside diphosphate kinase; SMART: Nucleoside diphosphate kinase; nucleoside-diphosphate kinase 1134656 10297739 NAL212_1223 Nitrosomonas sp. AL212 nucleoside-diphosphate kinase YP_004294295.1 1134231 D 153948 CDS YP_004294296.1 325981894 10297740 1134677..1135777 1 NC_015222.1 TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; KEGG: nmu:Nmul_A2379 hypothetical protein; PFAM: Radical SAM; ribosomal RNA large subunit methyltransferase N 1135777 10297740 NAL212_1224 Nitrosomonas sp. AL212 ribosomal RNA large subunit methyltransferase N YP_004294296.1 1134677 D 153948 CDS YP_004294297.1 325981895 10297741 1135774..1136553 1 NC_015222.1 KEGG: net:Neut_2170 type IV pilus biogenesis/stability protein PilW; TIGRFAM: Pilus biogenesis/stability type IV, PilW; PFAM: Tetratricopeptide TPR-1; type IV pilus biogenesis/stability protein PilW 1136553 10297741 NAL212_1225 Nitrosomonas sp. AL212 type IV pilus biogenesis/stability protein PilW YP_004294297.1 1135774 D 153948 CDS YP_004294298.1 325981896 10297742 1136550..1137776 1 NC_015222.1 SMART: Helix-turn-helix type 3; KEGG: neu:NE0147 hypothetical protein; XRE family transcriptional regulator 1137776 10297742 NAL212_1226 Nitrosomonas sp. AL212 XRE family transcriptional regulator YP_004294298.1 1136550 D 153948 CDS YP_004294299.1 325981897 10297743 1137812..1139050 1 NC_015222.1 KEGG: net:Neut_2168 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1139050 10297743 NAL212_1227 Nitrosomonas sp. AL212 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_004294299.1 1137812 D 153948 CDS YP_004294300.1 325981898 10297744 1139050..1140324 1 NC_015222.1 TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: neu:NE0150 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding; histidyl-tRNA synthetase 1140324 10297744 NAL212_1228 Nitrosomonas sp. AL212 histidyl-tRNA synthetase YP_004294300.1 1139050 D 153948 CDS YP_004294301.1 325981899 10297745 1140355..1140993 1 NC_015222.1 PFAM: Protein of unknown function DUF2133; KEGG: nmu:Nmul_A2375 hypothetical protein; hypothetical protein 1140993 10297745 NAL212_1229 Nitrosomonas sp. AL212 hypothetical protein YP_004294301.1 1140355 D 153948 CDS YP_004294302.1 325981900 10297746 1140971..1142227 1 NC_015222.1 KEGG: neu:NE0152 PQQ repeat-containing protein; TIGRFAM: Outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat; outer membrane assembly lipoprotein YfgL 1142227 10297746 NAL212_1230 Nitrosomonas sp. AL212 outer membrane assembly lipoprotein YfgL YP_004294302.1 1140971 D 153948 CDS YP_004294303.1 325981901 10297747 1142312..1143706 1 NC_015222.1 TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; KEGG: nmu:Nmul_A2373 GTP-binding protein EngA; SMART: ATPase, AAA+ type, core; ribosome-associated GTPase EngA 1143706 10297747 NAL212_1231 Nitrosomonas sp. AL212 ribosome-associated GTPase EngA YP_004294303.1 1142312 D 153948 CDS YP_004294304.1 325981902 10297748 1145109..1146275 1 NC_015222.1 KEGG: vap:Vapar_1531 two component transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; two component transcriptional regulator, LuxR family 1146275 10297748 NAL212_1232 Nitrosomonas sp. AL212 two component transcriptional regulator, LuxR family YP_004294304.1 1145109 D 153948 CDS YP_004294305.1 325981903 10297751 complement(1146936..1147322) 1 NC_015222.1 KEGG: mca:MCA1082 hypothetical protein; hypothetical protein 1147322 10297751 NAL212_1235 Nitrosomonas sp. AL212 hypothetical protein YP_004294305.1 1146936 R 153948 CDS YP_004294306.1 325981904 10297752 complement(1147325..1147420) 1 NC_015222.1 hypothetical protein 1147420 10297752 NAL212_1236 Nitrosomonas sp. AL212 hypothetical protein YP_004294306.1 1147325 R 153948 CDS YP_004294307.1 325981905 10297753 complement(1147427..1147600) 1 NC_015222.1 hypothetical protein 1147600 10297753 NAL212_1237 Nitrosomonas sp. AL212 hypothetical protein YP_004294307.1 1147427 R 153948 CDS YP_004294308.1 325981906 10297754 1147725..1148024 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: rms:RMA_0745 transposase; transposase IS3/IS911 family protein 1148024 10297754 NAL212_1238 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004294308.1 1147725 D 153948 CDS YP_004294309.1 325981907 10297755 1148056..1149210 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region; integrase catalytic region 1149210 10297755 NAL212_1239 Nitrosomonas sp. AL212 integrase catalytic region YP_004294309.1 1148056 D 153948 CDS YP_004294310.1 325981908 10297757 1150227..1151135 1 NC_015222.1 PFAM: NAD-dependent epimerase/dehydratase; Domain of unknown function DUF1731, C-terminal; KEGG: npu:Npun_R0504 hypothetical protein; NAD-dependent epimerase/dehydratase 1151135 10297757 NAL212_1241 Nitrosomonas sp. AL212 NAD-dependent epimerase/dehydratase YP_004294310.1 1150227 D 153948 CDS YP_004294311.1 325981909 10297758 1151163..1152467 1 NC_015222.1 KEGG: rbi:RB2501_13709 deoxyribodipyrimidine photolyase-class I; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; deoxyribodipyrimidine photo-lyase 1152467 10297758 NAL212_1242 Nitrosomonas sp. AL212 deoxyribodipyrimidine photo-lyase YP_004294311.1 1151163 D 153948 CDS YP_004294312.1 325981910 10297759 complement(1152495..1153196) 1 NC_015222.1 KEGG: pca:Pcar_0627 hypothetical protein; hypothetical protein 1153196 10297759 NAL212_1243 Nitrosomonas sp. AL212 hypothetical protein YP_004294312.1 1152495 R 153948 CDS YP_004294313.1 325981911 10297760 1153982..1154113 1 NC_015222.1 KEGG: nmu:Nmul_A1142 hypothetical protein; hypothetical protein 1154113 10297760 NAL212_1244 Nitrosomonas sp. AL212 hypothetical protein YP_004294313.1 1153982 D 153948 CDS YP_004294314.1 325981912 10297761 1154473..1154793 1 NC_015222.1 KEGG: net:Neut_1364 hypothetical protein; hypothetical protein 1154793 10297761 NAL212_1245 Nitrosomonas sp. AL212 hypothetical protein YP_004294314.1 1154473 D 153948 CDS YP_004294315.1 325981913 10297762 1154874..1155173 1 NC_015222.1 KEGG: net:Neut_1363 peptidase; peptidase 1155173 10297762 NAL212_1246 Nitrosomonas sp. AL212 peptidase YP_004294315.1 1154874 D 153948 CDS YP_004294316.1 325981914 10297763 1155245..1155931 1 NC_015222.1 KEGG: neu:NE1409 response regulator PhoP; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; two component transcriptional regulator, winged helix family 1155931 10297763 NAL212_1247 Nitrosomonas sp. AL212 two component transcriptional regulator, winged helix family YP_004294316.1 1155245 D 153948 CDS YP_004294317.1 325981915 10297764 1155928..1157268 1 NC_015222.1 KEGG: neu:NE1408 sensory transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; integral membrane sensor signal transduction histidine kinase 1157268 10297764 NAL212_1248 Nitrosomonas sp. AL212 integral membrane sensor signal transduction histidine kinase YP_004294317.1 1155928 D 153948 CDS YP_004294318.1 325981916 10297766 complement(1157933..1158031) 1 NC_015222.1 hypothetical protein 1158031 10297766 NAL212_1250 Nitrosomonas sp. AL212 hypothetical protein YP_004294318.1 1157933 R 153948 CDS YP_004294319.1 325981917 10297767 complement(1158144..1158416) 1 NC_015222.1 PFAM: Uncharacterised protein family UPF0016; KEGG: cts:Ctha_0720 protein of unknown function UPF0016; hypothetical protein 1158416 10297767 NAL212_1251 Nitrosomonas sp. AL212 hypothetical protein YP_004294319.1 1158144 R 153948 CDS YP_004294320.1 325981918 10297768 1158607..1159614 1 NC_015222.1 KEGG: sde:Sde_3956 zinc-containing alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; mannitol dehydrogenase 1159614 10297768 NAL212_1252 Nitrosomonas sp. AL212 mannitol dehydrogenase YP_004294320.1 1158607 D 153948 CDS YP_004294321.1 325981919 10297769 complement(1159889..1161055) 1 NC_015222.1 PFAM: ATPase, AFG1-like; KEGG: sjp:SJA_C1-24350 putative ATPase; AFG1 family ATPase 1161055 10297769 NAL212_1253 Nitrosomonas sp. AL212 AFG1 family ATPase YP_004294321.1 1159889 R 153948 CDS YP_004294322.1 325981920 10297770 complement(1161077..1162453) 1 NC_015222.1 PFAM: Major facilitator superfamily MFS-1; KEGG: nmu:Nmul_A0223 major facilitator transporter; major facilitator superfamily protein 1162453 10297770 NAL212_1254 Nitrosomonas sp. AL212 major facilitator superfamily protein YP_004294322.1 1161077 R 153948 CDS YP_004294323.1 325981921 10297771 complement(1162450..1163223) 1 NC_015222.1 TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: nmu:Nmul_A0224 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 1163223 10297771 NAL212_1255 Nitrosomonas sp. AL212 exodeoxyribonuclease III Xth YP_004294323.1 1162450 R 153948 CDS YP_004294324.1 325981922 10297772 1163250..1163894 1 NC_015222.1 TIGRFAM: Orotate phosphoribosyl transferase, clade 1; KEGG: nmu:Nmul_A0225 orotate phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; orotate phosphoribosyltransferase 1163894 10297772 NAL212_1256 Nitrosomonas sp. AL212 orotate phosphoribosyltransferase YP_004294324.1 1163250 D 153948 CDS YP_004294325.1 325981923 10297773 complement(1164046..1164825) 1 NC_015222.1 KEGG: gpb:HDN1F_07110 hypothetical protein; hypothetical protein 1164825 10297773 NAL212_1257 Nitrosomonas sp. AL212 hypothetical protein YP_004294325.1 1164046 R 153948 CDS YP_004294326.1 325981924 10297774 complement(1164822..1165544) 1 NC_015222.1 PFAM: RNA ligase domain, REL/Rln2; KEGG: dda:Dd703_3690 DNA ligase III-like protein; RNA ligase domain, REL/Rln2 1165544 10297774 NAL212_1258 Nitrosomonas sp. AL212 RNA ligase domain, REL/Rln2 YP_004294326.1 1164822 R 153948 CDS YP_004294327.1 325981925 10297775 complement(1165523..1166059) 1 NC_015222.1 KEGG: xau:Xaut_3738 hypothetical protein; hypothetical protein 1166059 10297775 NAL212_1259 Nitrosomonas sp. AL212 hypothetical protein YP_004294327.1 1165523 R 153948 CDS YP_004294328.1 325981926 10297776 complement(1166052..1167341) 1 NC_015222.1 PFAM: Domain of unknown function DUF3696, C-terminal; KEGG: xau:Xaut_3739 hypothetical protein; hypothetical protein 1167341 10297776 NAL212_1260 Nitrosomonas sp. AL212 hypothetical protein YP_004294328.1 1166052 R 153948 CDS YP_004294329.1 325981927 10297779 complement(1168439..1169593) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region; integrase catalytic region 1169593 10297779 NAL212_1263 Nitrosomonas sp. AL212 integrase catalytic region YP_004294329.1 1168439 R 153948 CDS YP_004294330.1 325981928 10297780 complement(1169625..1169933) 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1169933 10297780 NAL212_1264 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004294330.1 1169625 R 153948 CDS YP_004294331.1 325981929 10297782 1170739..1171059 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1171059 10297782 NAL212_1266 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004294331.1 1170739 D 153948 CDS YP_004294332.1 325981930 10297783 1171059..1171958 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit; integrase catalytic region 1171958 10297783 NAL212_1267 Nitrosomonas sp. AL212 integrase catalytic region YP_004294332.1 1171059 D 153948 CDS YP_004294333.1 325981931 10297784 complement(1171995..1173716) 1 NC_015222.1 KEGG: gpb:HDN1F_07060 DEAD/DEAH box helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; SMART: DEAD-like helicase, N-terminal; DEAD/DEAH box helicase domain-containing protein 1173716 10297784 NAL212_1268 Nitrosomonas sp. AL212 DEAD/DEAH box helicase domain-containing protein YP_004294333.1 1171995 R 153948 CDS YP_004294334.1 325981932 10297785 complement(1173925..1174518) 1 NC_015222.1 PFAM: Protein of unknown function DUF882; KEGG: neu:NE2572 hypothetical protein; hypothetical protein 1174518 10297785 NAL212_1269 Nitrosomonas sp. AL212 hypothetical protein YP_004294334.1 1173925 R 153948 CDS YP_004294335.1 325981933 10297786 complement(1174565..1176196) 1 NC_015222.1 PFAM: YkuD domain; Peptidoglycan binding-like; KEGG: net:Neut_2532 peptidoglycan binding domain-containing protein; ErfK/YbiS/YcfS/YnhG family protein 1176196 10297786 NAL212_1270 Nitrosomonas sp. AL212 ErfK/YbiS/YcfS/YnhG family protein YP_004294335.1 1174565 R 153948 CDS YP_004294336.1 325981934 10297787 complement(1176400..1178382) 1 NC_015222.1 PFAM: Amidohydrolase 3; KEGG: reu:Reut_B4849 hypothetical protein; amidohydrolase 3 1178382 10297787 NAL212_1271 Nitrosomonas sp. AL212 amidohydrolase 3 YP_004294336.1 1176400 R 153948 CDS YP_004294337.1 325981935 10297788 complement(1178415..1179044) 1 NC_015222.1 PFAM: Isochorismatase-like; KEGG: neu:NE2304 isochorismatase hydrolase family protein; isochorismatase hydrolase 1179044 10297788 NAL212_1272 Nitrosomonas sp. AL212 isochorismatase hydrolase YP_004294337.1 1178415 R 153948 CDS YP_004294338.1 325981936 10297789 complement(1179084..1179434) 1 NC_015222.1 KEGG: lic:LIC12065 hypothetical protein; hypothetical protein 1179434 10297789 NAL212_1273 Nitrosomonas sp. AL212 hypothetical protein YP_004294338.1 1179084 R 153948 CDS YP_004294339.1 325981937 10297790 complement(1179497..1180384) 1 NC_015222.1 PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: mpt:Mpe_A2645 pirin-related protein; Pirin domain-containing protein 1180384 10297790 NAL212_1274 Nitrosomonas sp. AL212 Pirin domain-containing protein YP_004294339.1 1179497 R 153948 CDS YP_004294340.1 325981938 10297791 1180492..1180812 1 NC_015222.1 PFAM: Helix-turn-helix, HxlR type; KEGG: ava:Ava_1063 transcriptional regulator; HxlR family transcriptional regulator 1180812 10297791 NAL212_1275 Nitrosomonas sp. AL212 HxlR family transcriptional regulator YP_004294340.1 1180492 D 153948 CDS YP_004294341.1 325981939 10297793 complement(1181037..1183238) 1 NC_015222.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: mca:MCA2590 cytochrome c peroxidase family protein, putative; di-heme cytochrome c peroxidase 1183238 10297793 NAL212_1277 Nitrosomonas sp. AL212 di-heme cytochrome c peroxidase YP_004294341.1 1181037 R 153948 CDS YP_004294342.1 325981940 10297794 complement(1183389..1184204) 1 NC_015222.1 PFAM: PEP-CTERM bacterial; KEGG: xom:XOO_2260 YapH protein; hypothetical protein 1184204 10297794 NAL212_1278 Nitrosomonas sp. AL212 hypothetical protein YP_004294342.1 1183389 R 153948 CDS YP_004294343.1 325981941 10297795 1184616..1185992 1 NC_015222.1 TIGRFAM: Adenylosuccinate lyase; KEGG: nmu:Nmul_A2241 adenylosuccinate lyase; PFAM: Lyase 1, N-terminal; Adenylosuccinate lyase C-terminal/plant; adenylosuccinate lyase 1185992 10297795 NAL212_1279 Nitrosomonas sp. AL212 adenylosuccinate lyase YP_004294343.1 1184616 D 153948 CDS YP_004294344.1 325981942 10297796 1186128..1186721 1 NC_015222.1 PFAM: GrpE nucleotide exchange factor; KEGG: neu:NE1950 heat shock protein GrpE; GrpE protein HSP-70 cofactor 1186721 10297796 NAL212_1280 Nitrosomonas sp. AL212 GrpE protein HSP-70 cofactor YP_004294344.1 1186128 D 153948 CDS YP_004294345.1 325981943 10297797 1186790..1188724 1 NC_015222.1 KEGG: nmu:Nmul_A2239 molecular chaperone DnaK; TIGRFAM: Chaperone DnaK; PFAM: Heat shock protein 70; chaperone protein DnaK 1188724 10297797 NAL212_1281 Nitrosomonas sp. AL212 chaperone protein DnaK YP_004294345.1 1186790 D 153948 CDS YP_004294346.1 325981944 10297798 1188872..1189981 1 NC_015222.1 TIGRFAM: Chaperone DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, cysteine-rich domain; Heat shock protein DnaJ, N-terminal; KEGG: nmu:Nmul_A2238 chaperone protein DnaJ; SMART: Heat shock protein DnaJ, N-terminal; chaperone protein DnaJ 1189981 10297798 NAL212_1282 Nitrosomonas sp. AL212 chaperone protein DnaJ YP_004294346.1 1188872 D 153948 CDS YP_004294347.1 325981945 10297799 1190906..1193266 1 NC_015222.1 TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; Beta-lactamase-like; KEGG: nmu:Nmul_A2506 DNA internalization-related competence protein ComEC/Rec2; SMART: Beta-lactamase-like; DNA internalization-related competence protein ComEC/Rec2 1193266 10297799 NAL212_1283 Nitrosomonas sp. AL212 DNA internalization-related competence protein ComEC/Rec2 YP_004294347.1 1190906 D 153948 CDS YP_004294348.1 325981946 10297800 complement(1193326..1194801) 1 NC_015222.1 KEGG: nmu:Nmul_A2410 periplasmic sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; integral membrane sensor signal transduction histidine kinase 1194801 10297800 NAL212_1284 Nitrosomonas sp. AL212 integral membrane sensor signal transduction histidine kinase YP_004294348.1 1193326 R 153948 CDS YP_004294349.1 325981947 10297801 complement(1194822..1195211) 1 NC_015222.1 KEGG: nmu:Nmul_A2411 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; response regulator receiver 1195211 10297801 NAL212_1285 Nitrosomonas sp. AL212 response regulator receiver YP_004294349.1 1194822 R 153948 CDS YP_004294350.1 325981948 10297802 complement(1195640..1196494) 1 NC_015222.1 PFAM: Heat shock protein Hsp33 protein; KEGG: app:CAP2UW1_0252 HSP33 protein; Hsp33 protein 1196494 10297802 NAL212_1286 Nitrosomonas sp. AL212 Hsp33 protein YP_004294350.1 1195640 R 153948 CDS YP_004294351.1 325981949 10297805 1199379..1200845 1 NC_015222.1 TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-3; KEGG: mag:amb3536 signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAC motif; PAS/PAC sensor signal transduction histidine kinase 1200845 10297805 NAL212_1289 Nitrosomonas sp. AL212 PAS/PAC sensor signal transduction histidine kinase YP_004294351.1 1199379 D 153948 CDS YP_004294352.1 325981950 10297806 1200851..1201297 1 NC_015222.1 KEGG: noc:Noc_1704 response regulator receiver; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; response regulator receiver protein 1201297 10297806 NAL212_1290 Nitrosomonas sp. AL212 response regulator receiver protein YP_004294352.1 1200851 D 153948 CDS YP_004294353.1 325981951 10297807 1201304..1202758 1 NC_015222.1 TIGRFAM: PAS; PFAM: Signal transduction response regulator, receiver domain; PAS fold; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; KEGG: bps:BPSS1358 sensor kinase protein; SMART: Signal transduction response regulator, receiver domain; PAS; PAC motif; ATPase-like, ATP-binding domain; multi-sensor signal transduction histidine kinase 1202758 10297807 NAL212_1291 Nitrosomonas sp. AL212 multi-sensor signal transduction histidine kinase YP_004294353.1 1201304 D 153948 CDS YP_004294354.1 325981952 10297808 1202751..1203383 1 NC_015222.1 KEGG: nmu:Nmul_A1235 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; two component transcriptional regulator, LuxR family 1203383 10297808 NAL212_1292 Nitrosomonas sp. AL212 two component transcriptional regulator, LuxR family YP_004294354.1 1202751 D 153948 CDS YP_004294355.1 325981953 10297809 1203465..1204358 1 NC_015222.1 KEGG: ppr:PBPRB1378 hypothetical protein; hypothetical protein 1204358 10297809 NAL212_1293 Nitrosomonas sp. AL212 hypothetical protein YP_004294355.1 1203465 D 153948 CDS YP_004294356.1 325981954 10297810 complement(1204777..1206360) 1 NC_015222.1 PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase; transposase IS66 1206360 10297810 NAL212_1294 Nitrosomonas sp. AL212 transposase IS66 YP_004294356.1 1204777 R 153948 CDS YP_004294357.1 325981955 10297811 complement(1206414..1206764) 1 NC_015222.1 KEGG: eba:ebB55 transposase, fragment; manually curated; PFAM: Transposase (putative), IS66 Orf2-like; IS66 Orf2 family protein 1206764 10297811 NAL212_1295 Nitrosomonas sp. AL212 IS66 Orf2 family protein YP_004294357.1 1206414 R 153948 CDS YP_004294358.1 325981956 10297812 complement(1206752..1207048) 1 NC_015222.1 KEGG: dat:HRM2_44620 hypothetical protein; hypothetical protein 1207048 10297812 NAL212_1296 Nitrosomonas sp. AL212 hypothetical protein YP_004294358.1 1206752 R 153948 CDS YP_004294359.1 325981957 10297814 1208312..1208512 1 NC_015222.1 KEGG: nmu:Nmul_A2086 50S ribosomal protein L31; TIGRFAM: Ribosomal protein L31; PFAM: Ribosomal protein L31; 50S ribosomal protein L31 1208512 10297814 NAL212_1298 Nitrosomonas sp. AL212 50S ribosomal protein L31 YP_004294359.1 1208312 D 153948 CDS YP_004294360.1 325981958 10297815 complement(1208610..1208921) 1 NC_015222.1 PFAM: Cupin 2, conserved barrel; KEGG: tdn:Suden_1847 hypothetical protein; cupin 2 barrel domain-containing protein 1208921 10297815 NAL212_1299 Nitrosomonas sp. AL212 cupin 2 barrel domain-containing protein YP_004294360.1 1208610 R 153948 CDS YP_004294361.1 325981959 10297816 1209734..1210702 1 NC_015222.1 TIGRFAM: Peptidyl-prolyl cis-trans isomerase, EpsD-type; KEGG: mfa:Mfla_2027 hypothetical protein; peptidyl-tRNA hydrolase 1210702 10297816 NAL212_1300 Nitrosomonas sp. AL212 peptidyl-tRNA hydrolase YP_004294361.1 1209734 D 153948 CDS YP_004294362.1 325981960 10297817 1210744..1211562 1 NC_015222.1 KEGG: mfa:Mfla_2026 polysaccharide export protein; TIGRFAM: Polysaccharide export EpsE; PFAM: Polysaccharide export protein; Soluble ligand binding domain; polysaccharide export protein EpsE 1211562 10297817 NAL212_1301 Nitrosomonas sp. AL212 polysaccharide export protein EpsE YP_004294362.1 1210744 D 153948 CDS YP_004294363.1 325981961 10297818 1211642..1213006 1 NC_015222.1 KEGG: mfa:Mfla_2025 lipopolysaccharide biosynthesis; TIGRFAM: Chain length determinant protein EpsF; PFAM: Lipopolysaccharide biosynthesis; chain length determinant protein EpsF 1213006 10297818 NAL212_1302 Nitrosomonas sp. AL212 chain length determinant protein EpsF YP_004294363.1 1211642 D 153948 CDS YP_004294364.1 325981962 10297819 1213036..1213941 1 NC_015222.1 KEGG: mmb:Mmol_1794 chain length determinant protein tyrosine kinase EpsG; TIGRFAM: Tyrosine-protein kinase, chain length determinant protein EpsG; Exopolysaccharide synthesis protein; chain length determinant protein tyrosine kinase EpsG 1213941 10297819 NAL212_1303 Nitrosomonas sp. AL212 chain length determinant protein tyrosine kinase EpsG YP_004294364.1 1213036 D 153948 CDS YP_004294365.1 325981963 10297820 1213960..1214850 1 NC_015222.1 KEGG: nmu:Nmul_A0246 hypothetical protein; TIGRFAM: Exosortase 2; Exosortase, EpsH; PFAM: Exosortase EpsH-related; exosortase 2 1214850 10297820 NAL212_1304 Nitrosomonas sp. AL212 exosortase 2 YP_004294365.1 1213960 D 153948 CDS YP_004294366.1 325981964 10297822 1215534..1216220 1 NC_015222.1 KEGG: tbd:Tbd_1791 hypothetical protein; TIGRFAM: Methanolan biosynthesis EpsI; PFAM: Methanolan biosynthesis EpsI; EpsI family protein 1216220 10297822 NAL212_1306 Nitrosomonas sp. AL212 EpsI family protein YP_004294366.1 1215534 D 153948 CDS YP_004294367.1 325981965 10297823 1216484..1217986 1 NC_015222.1 KEGG: meh:M301_0759 hypothetical protein; hypothetical protein 1217986 10297823 NAL212_1307 Nitrosomonas sp. AL212 hypothetical protein YP_004294367.1 1216484 D 153948 CDS YP_004294368.1 325981966 10297824 1218176..1218895 1 NC_015222.1 PFAM: Sulfotransferase; KEGG: tra:Trad_1617 hypothetical protein; chondroitin 4-O-sulfotransferase 1218895 10297824 NAL212_1308 Nitrosomonas sp. AL212 chondroitin 4-O-sulfotransferase YP_004294368.1 1218176 D 153948 CDS YP_004294369.1 325981967 10297825 1218936..1219823 1 NC_015222.1 PFAM: Sulfotransferase domain; KEGG: nhl:Nhal_1330 sulfotransferase; sulfotransferase 1219823 10297825 NAL212_1309 Nitrosomonas sp. AL212 sulfotransferase YP_004294369.1 1218936 D 153948 CDS YP_004294370.1 325981968 10297826 1220100..1221242 1 NC_015222.1 KEGG: nde:NIDE1370 hypothetical protein; hypothetical protein 1221242 10297826 NAL212_1310 Nitrosomonas sp. AL212 hypothetical protein YP_004294370.1 1220100 D 153948 CDS YP_004294371.1 325981969 10297827 1221330..1222205 1 NC_015222.1 PFAM: Sulfotransferase domain; KEGG: tra:Trad_2751 sulfotransferase; sulfotransferase 1222205 10297827 NAL212_1311 Nitrosomonas sp. AL212 sulfotransferase YP_004294371.1 1221330 D 153948 CDS YP_004294372.1 325981970 10297829 1223557..1224771 1 NC_015222.1 PFAM: Glycosyl transferase, group 1; KEGG: meh:M301_0760 glycosyl transferase group 1; group 1 glycosyl transferase 1224771 10297829 NAL212_1313 Nitrosomonas sp. AL212 group 1 glycosyl transferase YP_004294372.1 1223557 D 153948 CDS YP_004294373.1 325981971 10297831 1225333..1226226 1 NC_015222.1 KEGG: ppr:PBPRB1378 hypothetical protein; hypothetical protein 1226226 10297831 NAL212_1315 Nitrosomonas sp. AL212 hypothetical protein YP_004294373.1 1225333 D 153948 CDS YP_004294374.1 325981972 10297832 1227415..1228509 1 NC_015222.1 PFAM: Glycosyl transferase, group 1; KEGG: rba:RB12590 hexosyltransferase; group 1 glycosyl transferase 1228509 10297832 NAL212_1316 Nitrosomonas sp. AL212 group 1 glycosyl transferase YP_004294374.1 1227415 D 153948 CDS YP_004294375.1 325981973 10297833 1228546..1229334 1 NC_015222.1 manually curated; TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; KEGG: mca:MCA1437 sugar transferase/glycosyl transferase, WecB/TagA/CpsF family protein; PFAM: Glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase 1229334 10297833 NAL212_1317 Nitrosomonas sp. AL212 WecB/TagA/CpsF family glycosyl transferase YP_004294375.1 1228546 D 153948 CDS YP_004294376.1 325981974 10297834 1229395..1230315 1 NC_015222.1 PFAM: Sulfotransferase domain; KEGG: tbd:Tbd_1782 hypothetical protein; sulfotransferase 1230315 10297834 NAL212_1318 Nitrosomonas sp. AL212 sulfotransferase YP_004294376.1 1229395 D 153948 CDS YP_004294377.1 325981975 10297835 complement(1230373..1230963) 1 NC_015222.1 KEGG: nmu:Nmul_A2064 hypothetical protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; CBS domain-containing protein 1230963 10297835 NAL212_1319 Nitrosomonas sp. AL212 CBS domain-containing protein YP_004294377.1 1230373 R 153948 CDS YP_004294378.1 325981976 10297836 complement(1231092..1232534) 1 NC_015222.1 TIGRFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; KEGG: nmu:Nmul_A2367 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 1232534 10297836 NAL212_1320 Nitrosomonas sp. AL212 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_004294378.1 1231092 R 153948 CDS YP_004294379.1 325981977 10297837 complement(1232562..1232867) 1 NC_015222.1 KEGG: neu:NE0052 hypothetical protein; hypothetical protein 1232867 10297837 NAL212_1321 Nitrosomonas sp. AL212 hypothetical protein YP_004294379.1 1232562 R 153948 CDS YP_004294380.1 325981978 10297838 complement(1232904..1233779) 1 NC_015222.1 SMART: CoA-binding; TIGRFAM: Succinyl-CoA ligase, alpha subunit; KEGG: nmu:Nmul_A1995 succinyl-CoA synthetase subunit alpha; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit alpha 1233779 10297838 NAL212_1322 Nitrosomonas sp. AL212 succinyl-CoA synthetase subunit alpha YP_004294380.1 1232904 R 153948 CDS YP_004294381.1 325981979 10297839 complement(1233825..1234985) 1 NC_015222.1 TIGRFAM: Succinyl-CoA synthetase, beta subunit; KEGG: slt:Slit_0526 succinyl-CoA synthetase, beta subunit; PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit beta 1234985 10297839 NAL212_1323 Nitrosomonas sp. AL212 succinyl-CoA synthetase subunit beta YP_004294381.1 1233825 R 153948 CDS YP_004294382.1 325981980 10297840 1235265..1236620 1 NC_015222.1 KEGG: rme:Rmet_0476 hypothetical protein; hypothetical protein 1236620 10297840 NAL212_1324 Nitrosomonas sp. AL212 hypothetical protein YP_004294382.1 1235265 D 153948 CDS YP_004294383.1 325981981 10297841 1236823..1237200 1 NC_015222.1 KEGG: sde:Sde_2950 hypothetical protein; hypothetical protein 1237200 10297841 NAL212_1325 Nitrosomonas sp. AL212 hypothetical protein YP_004294383.1 1236823 D 153948 CDS YP_004294384.1 325981982 10297842 1237401..1237913 1 NC_015222.1 PFAM: Domain of unknown function DUF1993; KEGG: pfs:PFLU2136 hypothetical protein; hypothetical protein 1237913 10297842 NAL212_1326 Nitrosomonas sp. AL212 hypothetical protein YP_004294384.1 1237401 D 153948 CDS YP_004294385.1 325981983 10297843 1237968..1238207 1 NC_015222.1 hypothetical protein 1238207 10297843 NAL212_1327 Nitrosomonas sp. AL212 hypothetical protein YP_004294385.1 1237968 D 153948 CDS YP_004294386.1 325981984 10297844 complement(1238364..1239059) 1 NC_015222.1 PFAM: Domain of unknown function DUF125, transmembrane; KEGG: pin:Ping_1569 hypothetical protein; hypothetical protein 1239059 10297844 NAL212_1328 Nitrosomonas sp. AL212 hypothetical protein YP_004294386.1 1238364 R 153948 CDS YP_004294387.1 325981985 10297845 1239240..1240007 1 NC_015222.1 KEGG: pub:SAR11_0946 nitrogen regulation protein NtrY; hypothetical protein 1240007 10297845 NAL212_1329 Nitrosomonas sp. AL212 hypothetical protein YP_004294387.1 1239240 D 153948 CDS YP_004294388.1 325981986 10297846 1240576..1242240 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; KEGG: cag:Cagg_0841 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; Signal transduction response regulator, receiver domain; response regulator receiver modulated diguanylate cyclase 1242240 10297846 NAL212_1330 Nitrosomonas sp. AL212 response regulator receiver modulated diguanylate cyclase YP_004294388.1 1240576 D 153948 CDS YP_004294389.1 325981987 10297847 complement(1242286..1243281) 1 NC_015222.1 KEGG: vcj:VCD_003183 glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase); TIGRFAM: Alpha-L-glutamate ligase-related protein; PFAM: Prokaryotic glutathione synthetase, ATP-binding; alpha-L-glutamate ligase-like protein 1243281 10297847 NAL212_1331 Nitrosomonas sp. AL212 alpha-L-glutamate ligase-like protein YP_004294389.1 1242286 R 153948 CDS YP_004294390.1 325981988 10297848 complement(1243262..1244812) 1 NC_015222.1 KEGG: vfm:VFMJ11_0986 hypothetical protein; hypothetical protein 1244812 10297848 NAL212_1332 Nitrosomonas sp. AL212 hypothetical protein YP_004294390.1 1243262 R 153948 CDS YP_004294391.1 325981989 10297849 complement(1244812..1245576) 1 NC_015222.1 PFAM: Protein of unknown function DUF785; KEGG: dak:DaAHT2_0347 protein of unknown function DUF785; hypothetical protein 1245576 10297849 NAL212_1333 Nitrosomonas sp. AL212 hypothetical protein YP_004294391.1 1244812 R 153948 CDS YP_004294392.1 325981990 10297850 complement(1245717..1246121) 1 NC_015222.1 KEGG: nmr:Nmar_1456 hypothetical protein; hypothetical protein 1246121 10297850 NAL212_1334 Nitrosomonas sp. AL212 hypothetical protein YP_004294392.1 1245717 R 153948 CDS YP_004294393.1 325981991 10297851 complement(1246189..1247946) 1 NC_015222.1 KEGG: nmu:Nmul_A0515 dihydrolipoamide dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Biotin/lipoyl attachment; dihydrolipoamide dehydrogenase 1247946 10297851 NAL212_1335 Nitrosomonas sp. AL212 dihydrolipoamide dehydrogenase YP_004294393.1 1246189 R 153948 CDS YP_004294394.1 325981992 10297852 complement(1247968..1249233) 1 NC_015222.1 TIGRFAM: Gamma-glutamyl phosphate reductase GPR; KEGG: nmu:Nmul_A0514 gamma-glutamyl phosphate reductase; PFAM: Aldehyde dehydrogenase domain; gamma-glutamyl phosphate reductase 1249233 10297852 NAL212_1336 Nitrosomonas sp. AL212 gamma-glutamyl phosphate reductase YP_004294394.1 1247968 R 153948 CDS YP_004294395.1 325981993 10297853 1249488..1250348 1 NC_015222.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: app:CAP2UW1_3451 putative signal transduction protein; putative signal transduction protein 1250348 10297853 NAL212_1337 Nitrosomonas sp. AL212 putative signal transduction protein YP_004294395.1 1249488 D 153948 CDS YP_004294396.1 325981994 10297854 1250967..1251494 1 NC_015222.1 KEGG: mmb:Mmol_1781 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif putative anchor domain-containing protein 1251494 10297854 NAL212_1338 Nitrosomonas sp. AL212 PEP motif putative anchor domain-containing protein YP_004294396.1 1250967 D 153948 CDS YP_004294397.1 325981995 10297855 complement(1251727..1252104) 1 NC_015222.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cpb:Cphamn1_1508 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1252104 10297855 NAL212_1339 Nitrosomonas sp. AL212 glyoxalase/bleomycin resistance protein/dioxygenase YP_004294397.1 1251727 R 153948 CDS YP_004294398.1 325981996 10297856 complement(1252151..1254703) 1 NC_015222.1 TIGRFAM: Alpha-glucan phosphorylase; KEGG: nmu:Nmul_A0715 alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; alpha-glucan phosphorylase 1254703 10297856 NAL212_1340 Nitrosomonas sp. AL212 alpha-glucan phosphorylase YP_004294398.1 1252151 R 153948 CDS YP_004294399.1 325981997 10297857 complement(1254786..1255784) 1 NC_015222.1 TIGRFAM: Glucokinase; KEGG: nmu:Nmul_A1872 glucokinase; PFAM: Glucokinase; glucokinase 1255784 10297857 NAL212_1341 Nitrosomonas sp. AL212 glucokinase YP_004294399.1 1254786 R 153948 CDS YP_004294400.1 325981998 10297858 1255970..1257487 1 NC_015222.1 PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, putative; KEGG: pol:Bpro_1966 protein of unknown function DUF853, NPT hydrolase putative; hypothetical protein 1257487 10297858 NAL212_1342 Nitrosomonas sp. AL212 hypothetical protein YP_004294400.1 1255970 D 153948 CDS YP_004294401.1 325981999 10297859 1257882..1258967 1 NC_015222.1 KEGG: det:DET0629 D-ala D-ala ligase; PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase 1258967 10297859 NAL212_1343 Nitrosomonas sp. AL212 D-alanine--D-alanine ligase YP_004294401.1 1257882 D 153948 CDS YP_004294402.1 325982000 10297860 1258987..1259457 1 NC_015222.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: gym:GYMC10_0157 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 1259457 10297860 NAL212_1344 Nitrosomonas sp. AL212 GCN5-like N-acetyltransferase YP_004294402.1 1258987 D 153948 CDS YP_004294403.1 325982001 10297861 1259477..1260316 1 NC_015222.1 TIGRFAM: Diaminopimelate epimerase; KEGG: mev:Metev_0484 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; diaminopimelate epimerase 1260316 10297861 NAL212_1345 Nitrosomonas sp. AL212 diaminopimelate epimerase YP_004294403.1 1259477 D 153948 CDS YP_004294404.1 325982002 10297862 1260410..1260691 1 NC_015222.1 KEGG: mno:Mnod_1082 hypothetical protein; hypothetical protein 1260691 10297862 NAL212_1346 Nitrosomonas sp. AL212 hypothetical protein YP_004294404.1 1260410 D 153948 CDS YP_004294405.1 325982003 10297863 complement(1260776..1262125) 1 NC_015222.1 KEGG: azo:azo1327 GTP-binding protein HflX; TIGRFAM: GTP-binding protein, HflX; PFAM: GTP-binding protein, HSR1-related; GTP-binding proten HflX 1262125 10297863 NAL212_1347 Nitrosomonas sp. AL212 GTP-binding proten HflX YP_004294405.1 1260776 R 153948 CDS YP_004294406.1 325982004 10297864 complement(1262428..1264533) 1 NC_015222.1 SMART: RelA/SpoT; Metal-dependent phosphohydrolase, HD domain; TIGRFAM: RelA/SpoT protein; KEGG: neu:NE0368 bifunctional enzyme (p)ppGpp synthetase II and guanosine-3',5'-bisdiphosphate 3'-pyro; PFAM: RelA/SpoT; TGS; Metal-dependent phosphohydrolase, HD subdomain; (p)ppGpp synthetase I SpoT/RelA 1264533 10297864 NAL212_1348 Nitrosomonas sp. AL212 (p)ppGpp synthetase I SpoT/RelA YP_004294406.1 1262428 R 153948 CDS YP_004294407.1 325982005 10297865 complement(1264706..1264912) 1 NC_015222.1 KEGG: nmu:Nmul_A0051 DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase, subunit omega/K/RPABC2; DNA-directed RNA polymerase subunit omega 1264912 10297865 NAL212_1349 Nitrosomonas sp. AL212 DNA-directed RNA polymerase subunit omega YP_004294407.1 1264706 R 153948 CDS YP_004294408.1 325982006 10297866 complement(1265003..1265620) 1 NC_015222.1 SMART: Guanylate kinase/L-type calcium channel; TIGRFAM: Guanylate kinase, sub-group; KEGG: nmu:Nmul_A0052 guanylate kinase; PFAM: Guanylate kinase; guanylate kinase 1265620 10297866 NAL212_1350 Nitrosomonas sp. AL212 guanylate kinase YP_004294408.1 1265003 R 153948 CDS YP_004294409.1 325982007 10297867 complement(1265660..1267282) 1 NC_015222.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: dar:Daro_1602 protein kinase:GAF; putative signal transduction protein 1267282 10297867 NAL212_1351 Nitrosomonas sp. AL212 putative signal transduction protein YP_004294409.1 1265660 R 153948 CDS YP_004294410.1 325982008 10297868 complement(1267478..1267948) 1 NC_015222.1 TIGRFAM: Peptide methionine sulphoxide reductase MsrA; KEGG: nmu:Nmul_A2452 methionine sulfoxide reductase A; PFAM: Peptide methionine sulphoxide reductase MsrA; peptide methionine sulfoxide reductase 1267948 10297868 NAL212_1352 Nitrosomonas sp. AL212 peptide methionine sulfoxide reductase YP_004294410.1 1267478 R 153948 CDS YP_004294411.1 325982009 10297869 complement(1267961..1268596) 1 NC_015222.1 PFAM: DSBA-like thioredoxin domain; KEGG: nmu:Nmul_A2454 DsbA oxidoreductase; DSBA oxidoreductase 1268596 10297869 NAL212_1353 Nitrosomonas sp. AL212 DSBA oxidoreductase YP_004294411.1 1267961 R 153948 CDS YP_004294412.1 325982010 10297870 complement(1268678..1269487) 1 NC_015222.1 PFAM: Sporulation-related domain; KEGG: neu:NE0365 hypothetical protein; sporulation domain-containing protein 1269487 10297870 NAL212_1354 Nitrosomonas sp. AL212 sporulation domain-containing protein YP_004294412.1 1268678 R 153948 CDS YP_004294413.1 325982011 10297871 complement(1269512..1271272) 1 NC_015222.1 TIGRFAM: Arginyl-tRNA synthetase, class Ic; KEGG: nmu:Nmul_A2456 arginyl-tRNA synthetase; arginyl-tRNA synthetase 1271272 10297871 NAL212_1355 Nitrosomonas sp. AL212 arginyl-tRNA synthetase YP_004294413.1 1269512 R 153948 CDS YP_004294414.1 325982012 10297872 complement(1271383..1272123) 1 NC_015222.1 TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; KEGG: nmu:Nmul_A1952 RNA methyltransferase TrmH, group 3; SMART: RNA 2-O ribose methyltransferase, substrate binding; TrmH family RNA methyltransferase 1272123 10297872 NAL212_1356 Nitrosomonas sp. AL212 TrmH family RNA methyltransferase YP_004294414.1 1271383 R 153948 CDS YP_004294415.1 325982013 10297873 complement(1272242..1274467) 1 NC_015222.1 TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria; PFAM: Ribonuclease II/R; Ribonuclease B, N-terminal OB domain; Ribosomal protein S1, RNA-binding domain; KEGG: nmu:Nmul_A1953 VacB/RNase II family 3'-5' exoribonuclease; SMART: Ribonuclease II/R; Cold shock protein; RNA-binding domain, S1; ribonuclease R 1274467 10297873 NAL212_1357 Nitrosomonas sp. AL212 ribonuclease R YP_004294415.1 1272242 R 153948 CDS YP_004294416.1 325982014 10297875 complement(1274774..1274953) 1 NC_015222.1 hypothetical protein 1274953 10297875 NAL212_1358 Nitrosomonas sp. AL212 hypothetical protein YP_004294416.1 1274774 R 153948 CDS YP_004294417.1 325982015 10297876 1275188..1275613 1 NC_015222.1 TIGRFAM: RNA polymerase-binding, DksA; KEGG: nmu:Nmul_A2552 TraR/DksA family transcriptional regulator; TraR/DksA family transcriptional regulator 1275613 10297876 NAL212_1359 Nitrosomonas sp. AL212 TraR/DksA family transcriptional regulator YP_004294417.1 1275188 D 153948 CDS YP_004294418.1 325982016 10297877 complement(1275723..1277852) 1 NC_015222.1 KEGG: nmu:Nmul_A2553 polynucleotide phosphorylase/polyadenylase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA-binding domain; TIGRFAM: Polyribonucleotide nucleotidyltransferase; HAMAP: Polyribonucleotide nucleotidyltransferase; SMART: RNA-binding domain, S1; K Homology; polyribonucleotide nucleotidyltransferase 1277852 10297877 NAL212_1360 Nitrosomonas sp. AL212 polyribonucleotide nucleotidyltransferase YP_004294418.1 1275723 R 153948 CDS YP_004294419.1 325982017 10297878 complement(1277985..1278254) 1 NC_015222.1 KEGG: nmu:Nmul_A2554 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15; 30S ribosomal protein S15 1278254 10297878 NAL212_1361 Nitrosomonas sp. AL212 30S ribosomal protein S15 YP_004294419.1 1277985 R 153948 CDS YP_004294420.1 325982018 10297879 complement(1278606..1280069) 1 NC_015222.1 PFAM: Dynamin, GTPase domain; KEGG: neu:NE1856 hypothetical protein; dynamin family protein 1280069 10297879 NAL212_1362 Nitrosomonas sp. AL212 dynamin family protein YP_004294420.1 1278606 R 153948 CDS YP_004294421.1 325982019 10297880 1280607..1281500 1 NC_015222.1 KEGG: ppr:PBPRB1378 hypothetical protein; hypothetical protein 1281500 10297880 NAL212_1363 Nitrosomonas sp. AL212 hypothetical protein YP_004294421.1 1280607 D 153948 CDS YP_004294422.1 325982020 10297881 complement(1281730..1282758) 1 NC_015222.1 KEGG: nmu:Nmul_A1737 glycine cleavage T protein (aminomethyl transferase); TIGRFAM: Folate-binding, YgfZ; PFAM: Glycine cleavage T-protein, N-terminal; folate-binding protein YgfZ 1282758 10297881 NAL212_1364 Nitrosomonas sp. AL212 folate-binding protein YgfZ YP_004294422.1 1281730 R 153948 CDS YP_004294423.1 325982021 10297882 1282881..1283315 1 NC_015222.1 KEGG: nmu:Nmul_A1738 hypothetical protein; hypothetical protein 1283315 10297882 NAL212_1365 Nitrosomonas sp. AL212 hypothetical protein YP_004294423.1 1282881 D 153948 CDS YP_004294424.1 325982022 10297883 1283577..1284026 1 NC_015222.1 KEGG: fba:FIC_01038 hypothetical protein; hypothetical protein 1284026 10297883 NAL212_1366 Nitrosomonas sp. AL212 hypothetical protein YP_004294424.1 1283577 D 153948 CDS YP_004294425.1 325982023 10297884 complement(1284297..1284659) 1 NC_015222.1 KEGG: neu:NE0096 hypothetical protein; hypothetical protein 1284659 10297884 NAL212_1367 Nitrosomonas sp. AL212 hypothetical protein YP_004294425.1 1284297 R 153948 CDS YP_004294426.1 325982024 10297885 complement(1284724..1285248) 1 NC_015222.1 KEGG: aas:Aasi_1042 hypothetical protein; hypothetical protein 1285248 10297885 NAL212_1368 Nitrosomonas sp. AL212 hypothetical protein YP_004294426.1 1284724 R 153948 CDS YP_004294427.1 325982025 10297886 1285877..1286746 1 NC_015222.1 KEGG: nmu:Nmul_A0562 phosphoribulokinase; PFAM: Phosphoribulokinase/uridine kinase; phosphoribulokinase 1286746 10297886 NAL212_1369 Nitrosomonas sp. AL212 phosphoribulokinase YP_004294427.1 1285877 D 153948 CDS YP_004294428.1 325982026 10297887 1286894..1289110 1 NC_015222.1 PFAM: DNA helicase, UvrD/REP type; KEGG: nmu:Nmul_A0563 UvrD/REP helicase; UvrD/REP helicase 1289110 10297887 NAL212_1370 Nitrosomonas sp. AL212 UvrD/REP helicase YP_004294428.1 1286894 D 153948 CDS YP_004294429.1 325982027 10297888 complement(1289212..1291353) 1 NC_015222.1 KEGG: cyt:cce_4430 putative sialidase; hypothetical protein 1291353 10297888 NAL212_1371 Nitrosomonas sp. AL212 hypothetical protein YP_004294429.1 1289212 R 153948 CDS YP_004294430.1 325982028 10297889 complement(1292013..1294151) 1 NC_015222.1 KEGG: cyt:cce_4430 putative sialidase; hypothetical protein 1294151 10297889 NAL212_1372 Nitrosomonas sp. AL212 hypothetical protein YP_004294430.1 1292013 R 153948 CDS YP_004294431.1 325982029 10297890 complement(1294817..1295131) 1 NC_015222.1 PFAM: BolA protein; KEGG: neu:NE0913 BolA-like protein; BolA family protein 1295131 10297890 NAL212_1373 Nitrosomonas sp. AL212 BolA family protein YP_004294431.1 1294817 R 153948 CDS YP_004294432.1 325982030 10297892 complement(1295516..1296427) 1 NC_015222.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nhl:Nhal_1613 LysR substrate-binding protein; LysR family transcriptional regulator 1296427 10297892 NAL212_1375 Nitrosomonas sp. AL212 LysR family transcriptional regulator YP_004294432.1 1295516 R 153948 CDS YP_004294433.1 325982031 10297893 1296457..1296618 1 NC_015222.1 hypothetical protein 1296618 10297893 NAL212_1376 Nitrosomonas sp. AL212 hypothetical protein YP_004294433.1 1296457 D 153948 CDS YP_004294434.1 325982032 10297894 1296760..1296957 1 NC_015222.1 hypothetical protein 1296957 10297894 NAL212_1377 Nitrosomonas sp. AL212 hypothetical protein YP_004294434.1 1296760 D 153948 CDS YP_004294435.1 325982033 10297895 complement(1297222..1298946) 1 NC_015222.1 KEGG: eca:ECA0866 dihydroxyacetone kinase; PFAM: Dak kinase; Dak phosphatase; glycerone kinase 1298946 10297895 NAL212_1378 Nitrosomonas sp. AL212 glycerone kinase YP_004294435.1 1297222 R 153948 CDS YP_004294436.1 325982034 10297896 complement(1299107..1302817) 1 NC_015222.1 TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; PAS fold; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; KEGG: net:Neut_0219 multi-sensor hybrid histidine kinase; SMART: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; PAS; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; multi-sensor hybrid histidine kinase 1302817 10297896 NAL212_1379 Nitrosomonas sp. AL212 multi-sensor hybrid histidine kinase YP_004294436.1 1299107 R 153948 CDS YP_004294437.1 325982035 10297897 1303245..1304597 1 NC_015222.1 PFAM: Protein of unknown function DUF2320; KEGG: har:HEAR0712 hypothetical protein; hypothetical protein 1304597 10297897 NAL212_1380 Nitrosomonas sp. AL212 hypothetical protein YP_004294437.1 1303245 D 153948 CDS YP_004294438.1 325982036 10297898 1304594..1306039 1 NC_015222.1 KEGG: mfa:Mfla_2028 sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; UDP-phosphate glucose phosphotransferase 1306039 10297898 NAL212_1381 Nitrosomonas sp. AL212 UDP-phosphate glucose phosphotransferase YP_004294438.1 1304594 D 153948 CDS YP_004294439.1 325982037 10297899 1306227..1307120 1 NC_015222.1 KEGG: ppr:PBPRB1378 hypothetical protein; hypothetical protein 1307120 10297899 NAL212_1382 Nitrosomonas sp. AL212 hypothetical protein YP_004294439.1 1306227 D 153948 CDS YP_004294440.1 325982038 10297900 1307228..1307551 1 NC_015222.1 PFAM: Ferredoxin, C-terminal; 4Fe-4S binding domain; KEGG: neu:NE0006 7Fe ferredoxin; Ferredoxin, C-terminal protein 1307551 10297900 NAL212_1383 Nitrosomonas sp. AL212 Ferredoxin, C-terminal protein YP_004294440.1 1307228 D 153948 CDS YP_004294441.1 325982039 10297901 1307580..1310351 1 NC_015222.1 TIGRFAM: DNA repair protein, predicted; KEGG: nmu:Nmul_A0722 hypothetical protein; putative DNA repair protein 1310351 10297901 NAL212_1384 Nitrosomonas sp. AL212 putative DNA repair protein YP_004294441.1 1307580 D 153948 CDS YP_004294442.1 325982040 10297902 1310344..1313820 1 NC_015222.1 PFAM: DNA helicase, UvrD/REP type; KEGG: nmu:Nmul_A0723 UvrD/REP helicase; UvrD/REP helicase 1313820 10297902 NAL212_1385 Nitrosomonas sp. AL212 UvrD/REP helicase YP_004294442.1 1310344 D 153948 CDS YP_004294443.1 325982041 10297903 1314148..1314957 1 NC_015222.1 KEGG: nmu:Nmul_A2766 ammonia monooxygenase/methane monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; methane monooxygenase/ammonia monooxygenase subunit C 1314957 10297903 NAL212_1386 Nitrosomonas sp. AL212 methane monooxygenase/ammonia monooxygenase subunit C YP_004294443.1 1314148 D 153948 CDS YP_004294444.1 325982042 10297904 1315132..1315956 1 NC_015222.1 KEGG: nmu:Nmul_A2765 ammonia monooxygenase; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; methane monooxygenase/ammonia monooxygenase subunit A 1315956 10297904 NAL212_1387 Nitrosomonas sp. AL212 methane monooxygenase/ammonia monooxygenase subunit A YP_004294444.1 1315132 D 153948 CDS YP_004294445.1 325982043 10297905 1315956..1317218 1 NC_015222.1 KEGG: nmu:Nmul_A2764 monooxygenase subunit B protein; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; methane monooxygenase/ammonia monooxygenase subunit B 1317218 10297905 NAL212_1388 Nitrosomonas sp. AL212 methane monooxygenase/ammonia monooxygenase subunit B YP_004294445.1 1315956 D 153948 CDS YP_004294446.1 325982044 10297906 1317432..1317731 1 NC_015222.1 PFAM: Rhodanese-like; KEGG: cyb:CYB_1025 rhodanese domain-containing protein; rhodanese-like protein 1317731 10297906 NAL212_1389 Nitrosomonas sp. AL212 rhodanese-like protein YP_004294446.1 1317432 D 153948 CDS YP_004294447.1 325982045 10297907 complement(1317885..1319495) 1 NC_015222.1 PFAM: Amino acid permease domain; KEGG: tpr:Tpau_0951 amino acid permease-associated region; amino acid permease-associated protein 1319495 10297907 NAL212_1390 Nitrosomonas sp. AL212 amino acid permease-associated protein YP_004294447.1 1317885 R 153948 CDS YP_004294448.1 325982046 10297908 complement(1319754..1321169) 1 NC_015222.1 KEGG: nmu:Nmul_A2075 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoyl dehydrogenase 1321169 10297908 NAL212_1391 Nitrosomonas sp. AL212 dihydrolipoyl dehydrogenase YP_004294448.1 1319754 R 153948 CDS YP_004294449.1 325982047 10297909 complement(1321564..1323312) 1 NC_015222.1 TIGRFAM: Gamma-glutamyltranspeptidase; KEGG: bav:BAV2817 gamma-glutamyltranspeptidase; PFAM: Gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1323312 10297909 NAL212_1392 Nitrosomonas sp. AL212 gamma-glutamyltransferase YP_004294449.1 1321564 R 153948 CDS YP_004294450.1 325982048 10297910 1323556..1324035 1 NC_015222.1 KEGG: dba:Dbac_1033 transport-associated; PFAM: Transport-associated; SMART: Transport-associated and nodulation domain, bacteria; transport-associated protein 1324035 10297910 NAL212_1393 Nitrosomonas sp. AL212 transport-associated protein YP_004294450.1 1323556 D 153948 CDS YP_004294451.1 325982049 10297911 1324044..1325186 1 NC_015222.1 PFAM: Protein of unknown function DUF1207; KEGG: nmu:Nmul_A0641 hypothetical protein; hypothetical protein 1325186 10297911 NAL212_1394 Nitrosomonas sp. AL212 hypothetical protein YP_004294451.1 1324044 D 153948 CDS YP_004294452.1 325982050 10297912 complement(1325459..1326424) 1 NC_015222.1 PFAM: Ribosomal RNA adenine methylase transferase; KEGG: mms:mma_1953 hypothetical protein; ribosomal RNA adenine methylase transferase 1326424 10297912 NAL212_1395 Nitrosomonas sp. AL212 ribosomal RNA adenine methylase transferase YP_004294452.1 1325459 R 153948 CDS YP_004294453.1 325982051 10297913 1326634..1326819 1 NC_015222.1 hypothetical protein 1326819 10297913 NAL212_1396 Nitrosomonas sp. AL212 hypothetical protein YP_004294453.1 1326634 D 153948 CDS YP_004294454.1 325982052 10297914 1326962..1328209 1 NC_015222.1 KEGG: hel:HELO_4305 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal; Sporulation-related domain; serine-type D-Ala-D-Ala carboxypeptidase 1328209 10297914 NAL212_1397 Nitrosomonas sp. AL212 serine-type D-Ala-D-Ala carboxypeptidase YP_004294454.1 1326962 D 153948 CDS YP_004294455.1 325982053 10297915 complement(1328401..1329066) 1 NC_015222.1 KEGG: nmu:Nmul_A0069 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N-7) methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 1329066 10297915 NAL212_1398 Nitrosomonas sp. AL212 tRNA (guanine-N(7)-)-methyltransferase YP_004294455.1 1328401 R 153948 CDS YP_004294456.1 325982054 10297916 complement(1329098..1329913) 1 NC_015222.1 PFAM: Thiazole biosynthesis; KEGG: nmu:Nmul_A0070 thiazole synthase; thiazole biosynthesis family protein 1329913 10297916 NAL212_1399 Nitrosomonas sp. AL212 thiazole biosynthesis family protein YP_004294456.1 1329098 R 153948 CDS YP_004294457.1 325982055 10297917 complement(1329955..1330158) 1 NC_015222.1 KEGG: net:Neut_0324 thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS; thiamine biosynthesis protein ThiS 1330158 10297917 NAL212_1400 Nitrosomonas sp. AL212 thiamine biosynthesis protein ThiS YP_004294457.1 1329955 R 153948 CDS YP_004294458.1 325982056 10297918 complement(1330381..1331814) 1 NC_015222.1 PFAM: Peptidase M10B, serralysin, C-terminal; KEGG: npu:Npun_F4619 hemolysin-type calcium-binding region; SMART: Peptidase, metallopeptidase; serralysin 1331814 10297918 NAL212_1401 Nitrosomonas sp. AL212 serralysin YP_004294458.1 1330381 R 153948 CDS YP_004294459.1 325982057 10297919 1332759..1333622 1 NC_015222.1 PFAM: Nucleotide-binding protein, predicted, TIR-like; KEGG: cps:CPS_2866 hypothetical protein; nucleotide-binding protein 1333622 10297919 NAL212_1402 Nitrosomonas sp. AL212 nucleotide-binding protein YP_004294459.1 1332759 D 153948 CDS YP_004294460.1 325982058 10297921 complement(1334133..1335182) 1 NC_015222.1 PFAM: Filamentation induced by cAMP/death on curing-related; Protein of unknown function DUF977; KEGG: net:Neut_2415 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 1335182 10297921 NAL212_1404 Nitrosomonas sp. AL212 filamentation induced by cAMP protein fic YP_004294460.1 1334133 R 153948 CDS YP_004294461.1 325982059 10297922 1335351..1335572 1 NC_015222.1 KEGG: ton:TON_1836 GalE-2 UDP-glucose 4-epimerase; hypothetical protein 1335572 10297922 NAL212_1405 Nitrosomonas sp. AL212 hypothetical protein YP_004294461.1 1335351 D 153948 CDS YP_004294462.1 325982060 10297923 1335964..1337736 1 NC_015222.1 KEGG: mca:MCA0716 hypothetical protein; hypothetical protein 1337736 10297923 NAL212_1406 Nitrosomonas sp. AL212 hypothetical protein YP_004294462.1 1335964 D 153948 CDS YP_004294463.1 325982061 10297924 1337865..1338155 1 NC_015222.1 KEGG: pin:Ping_1241 hypothetical protein; hypothetical protein 1338155 10297924 NAL212_1407 Nitrosomonas sp. AL212 hypothetical protein YP_004294463.1 1337865 D 153948 CDS YP_004294464.1 325982062 10297926 complement(1338549..1340132) 1 NC_015222.1 PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase; transposase IS66 1340132 10297926 NAL212_1409 Nitrosomonas sp. AL212 transposase IS66 YP_004294464.1 1338549 R 153948 CDS YP_004294465.1 325982063 10297927 complement(1340186..1340557) 1 NC_015222.1 PFAM: Transposase (putative), IS66 Orf2-like; KEGG: eba:ebB55 transposase, fragment; IS66 Orf2 family protein 1340557 10297927 NAL212_1410 Nitrosomonas sp. AL212 IS66 Orf2 family protein YP_004294465.1 1340186 R 153948 CDS YP_004294466.1 325982064 10297928 complement(1340524..1340820) 1 NC_015222.1 KEGG: dat:HRM2_44620 hypothetical protein; hypothetical protein 1340820 10297928 NAL212_1411 Nitrosomonas sp. AL212 hypothetical protein YP_004294466.1 1340524 R 153948 CDS YP_004294467.1 325982065 10297930 complement(1341117..1342568) 1 NC_015222.1 KEGG: nmu:Nmul_A1726 RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 1342568 10297930 NAL212_1413 Nitrosomonas sp. AL212 NodT family RND efflux system outer membrane lipoprotein YP_004294467.1 1341117 R 153948 CDS YP_004294468.1 325982066 10297931 complement(1342537..1345779) 1 NC_015222.1 KEGG: nmu:Nmul_A1727 hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 1345779 10297931 NAL212_1414 Nitrosomonas sp. AL212 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004294468.1 1342537 R 153948 CDS YP_004294469.1 325982067 10297932 complement(1345803..1346966) 1 NC_015222.1 KEGG: nmu:Nmul_A1728 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1346966 10297932 NAL212_1415 Nitrosomonas sp. AL212 RND family efflux transporter MFP subunit YP_004294469.1 1345803 R 153948 CDS YP_004294470.1 325982068 10297935 1348486..1348845 1 NC_015222.1 KEGG: pin:Ping_0634 hypothetical protein; hypothetical protein 1348845 10297935 NAL212_1418 Nitrosomonas sp. AL212 hypothetical protein YP_004294470.1 1348486 D 153948 CDS YP_004294471.1 325982069 10297936 complement(1348945..1349844) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit; integrase catalytic region 1349844 10297936 NAL212_1419 Nitrosomonas sp. AL212 integrase catalytic region YP_004294471.1 1348945 R 153948 CDS YP_004294472.1 325982070 10297937 1349951..1351105 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region; integrase catalytic region 1351105 10297937 NAL212_1420 Nitrosomonas sp. AL212 integrase catalytic region YP_004294472.1 1349951 D 153948 CDS YP_004294473.1 325982071 10297940 complement(1352328..1353827) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: mms:mma_2809 transposase IstA; integrase catalytic region 1353827 10297940 NAL212_1423 Nitrosomonas sp. AL212 integrase catalytic region YP_004294473.1 1352328 R 153948 CDS YP_004294474.1 325982072 10297942 complement(1354319..1356007) 1 NC_015222.1 PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; Multicopper oxidase, type 1; KEGG: sde:Sde_0315 phosphoenolpyruvate-protein phosphotransferase; multicopper oxidase type 2 1356007 10297942 NAL212_1425 Nitrosomonas sp. AL212 multicopper oxidase type 2 YP_004294474.1 1354319 R 153948 CDS YP_004294475.1 325982073 10297943 complement(1356171..1357940) 1 NC_015222.1 KEGG: rsl:RPSI07_mp0837 exported protein of unknown function; hypothetical protein 1357940 10297943 NAL212_1426 Nitrosomonas sp. AL212 hypothetical protein YP_004294475.1 1356171 R 153948 CDS YP_004294476.1 325982074 10297944 1358455..1360950 1 NC_015222.1 KEGG: pst:PSPTO_4627 hypothetical protein; hypothetical protein 1360950 10297944 NAL212_1427 Nitrosomonas sp. AL212 hypothetical protein YP_004294476.1 1358455 D 153948 CDS YP_004294477.1 325982075 10297945 complement(1361127..1361495) 1 NC_015222.1 SMART: Helix-turn-helix type 3; KEGG: neu:NE1587 helix-hairpin-helix DNA-binding motif-containing protein; XRE family transcriptional regulator 1361495 10297945 NAL212_1428 Nitrosomonas sp. AL212 XRE family transcriptional regulator YP_004294477.1 1361127 R 153948 CDS YP_004294478.1 325982076 10297946 complement(1361514..1361816) 1 NC_015222.1 PFAM: Protein of unknown function DUF2136; KEGG: neu:NE1588 hypothetical protein; hypothetical protein 1361816 10297946 NAL212_1429 Nitrosomonas sp. AL212 hypothetical protein YP_004294478.1 1361514 R 153948 CDS YP_004294479.1 325982077 10297947 complement(1361853..1362938) 1 NC_015222.1 PFAM: Protein of unknown function DUF3596; Integrase, catalytic core, phage; KEGG: lpf:lpl0179 hypothetical protein; hypothetical protein 1362938 10297947 NAL212_1430 Nitrosomonas sp. AL212 hypothetical protein YP_004294479.1 1361853 R 153948 CDS YP_004294480.1 325982078 10297948 complement(1362914..1363108) 1 NC_015222.1 KEGG: ppg:PputGB1_1182 putative phage excisionase; hypothetical protein 1363108 10297948 NAL212_1431 Nitrosomonas sp. AL212 hypothetical protein YP_004294480.1 1362914 R 153948 CDS YP_004294481.1 325982079 10297949 complement(1363105..1363524) 1 NC_015222.1 KEGG: meh:M301_2557 hypothetical protein; hypothetical protein 1363524 10297949 NAL212_1432 Nitrosomonas sp. AL212 hypothetical protein YP_004294481.1 1363105 R 153948 CDS YP_004294482.1 325982080 10297950 complement(1363605..1363874) 1 NC_015222.1 KEGG: mfr:MFE_02050 hypothetical protein; hypothetical protein 1363874 10297950 NAL212_1433 Nitrosomonas sp. AL212 hypothetical protein YP_004294482.1 1363605 R 153948 CDS YP_004294483.1 325982081 10297951 complement(1363852..1365477) 1 NC_015222.1 PFAM: Replication endonuclease, probable, phage; KEGG: mfa:Mfla_0975 bacteriophage replication gene A; replication protein A 1365477 10297951 NAL212_1434 Nitrosomonas sp. AL212 replication protein A YP_004294483.1 1363852 R 153948 CDS YP_004294484.1 325982082 10297953 complement(1366129..1366776) 1 NC_015222.1 TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: neu:NE2546 HAD family hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; phosphoglycolate phosphatase 1366776 10297953 NAL212_1435 Nitrosomonas sp. AL212 phosphoglycolate phosphatase YP_004294484.1 1366129 R 153948 CDS YP_004294485.1 325982083 10297954 complement(1366806..1367513) 1 NC_015222.1 TIGRFAM: Ubiquinone biosynthesis O-methyltransferase; KEGG: neu:NE2547 3-demethylubiquinone-9 3-methyltransferase; PFAM: Methyltransferase type 11; ubiquinone biosynthesis O-methyltransferase 1367513 10297954 NAL212_1436 Nitrosomonas sp. AL212 ubiquinone biosynthesis O-methyltransferase YP_004294485.1 1366806 R 153948 CDS YP_004294486.1 325982084 10297955 complement(1367524..1368864) 1 NC_015222.1 KEGG: nmu:Nmul_A2187 N-ethylammeline chlorohydrolase; PFAM: Amidohydrolase 1; S-adenosylhomocysteine deaminase 1368864 10297955 NAL212_1437 Nitrosomonas sp. AL212 S-adenosylhomocysteine deaminase YP_004294486.1 1367524 R 153948 CDS YP_004294487.1 325982085 10297956 complement(1368938..1369615) 1 NC_015222.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: neu:NE2548 outer membrane protein; OmpA/MotB domain-containing protein 1369615 10297956 NAL212_1438 Nitrosomonas sp. AL212 OmpA/MotB domain-containing protein YP_004294487.1 1368938 R 153948 CDS YP_004294488.1 325982086 10297957 1370068..1370799 1 NC_015222.1 KEGG: neu:NE2549 ATPase component ABC-type multidrug transport system; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 1370799 10297957 NAL212_1439 Nitrosomonas sp. AL212 ABC transporter YP_004294488.1 1370068 D 153948 CDS YP_004294489.1 325982087 10297958 1370819..1371562 1 NC_015222.1 KEGG: neu:NE2550 putative ABC-2 type transport system permease protein; putative ABC-2 type transport system permease protein 1371562 10297958 NAL212_1440 Nitrosomonas sp. AL212 putative ABC-2 type transport system permease protein YP_004294489.1 1370819 D 153948 CDS YP_004294490.1 325982088 10297959 1371583..1372938 1 NC_015222.1 PFAM: ABC-type uncharacterised transport system; KEGG: nmu:Nmul_A0583 hypothetical protein; ABC transporter 1372938 10297959 NAL212_1441 Nitrosomonas sp. AL212 ABC transporter YP_004294490.1 1371583 D 153948 CDS YP_004294491.1 325982089 10297960 1372935..1373792 1 NC_015222.1 KEGG: mfa:Mfla_0685 hypothetical protein; hypothetical protein 1373792 10297960 NAL212_1442 Nitrosomonas sp. AL212 hypothetical protein YP_004294491.1 1372935 D 153948 CDS YP_004294492.1 325982090 10297961 1373807..1374637 1 NC_015222.1 SMART: DNA glycosylase/AP lyase, catalytic domain; TIGRFAM: DNA glycosylase/AP lyase; KEGG: nmu:Nmul_A0582 formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase; formamidopyrimidine-DNA glycosylase 1374637 10297961 NAL212_1443 Nitrosomonas sp. AL212 formamidopyrimidine-DNA glycosylase YP_004294492.1 1373807 D 153948 CDS YP_004294493.1 325982091 10297962 1374768..1375607 1 NC_015222.1 TIGRFAM: Pyrroline-5-carboxylate reductase; KEGG: nmu:Nmul_A0581 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; pyrroline-5-carboxylate reductase 1375607 10297962 NAL212_1444 Nitrosomonas sp. AL212 pyrroline-5-carboxylate reductase YP_004294493.1 1374768 D 153948 CDS YP_004294494.1 325982092 10297963 1375803..1376378 1 NC_015222.1 PFAM: Uncharacterised protein family Ycf19; KEGG: nmu:Nmul_A0580 hypothetical protein; hypothetical protein 1376378 10297963 NAL212_1445 Nitrosomonas sp. AL212 hypothetical protein YP_004294494.1 1375803 D 153948 CDS YP_004294495.1 325982093 10297964 1376381..1376722 1 NC_015222.1 PFAM: Protein of unknown function DUF167; KEGG: slt:Slit_2755 protein of unknown function DUF167; hypothetical protein 1376722 10297964 NAL212_1446 Nitrosomonas sp. AL212 hypothetical protein YP_004294495.1 1376381 D 153948 CDS YP_004294496.1 325982094 10297965 1376713..1377174 1 NC_015222.1 KEGG: nmu:Nmul_A0198 phosphohistidine phosphatase, SixA; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; putative phosphohistidine phosphatase, SixA 1377174 10297965 NAL212_1447 Nitrosomonas sp. AL212 putative phosphohistidine phosphatase, SixA YP_004294496.1 1376713 D 153948 CDS YP_004294497.1 325982095 10297966 1377204..1377758 1 NC_015222.1 KEGG: mfa:Mfla_2138 ribosomal large subunit pseudouridine synthase E; TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; pseudouridine synthase Rsu 1377758 10297966 NAL212_1448 Nitrosomonas sp. AL212 pseudouridine synthase Rsu YP_004294497.1 1377204 D 153948 CDS YP_004294498.1 325982096 10297967 1378073..1379263 1 NC_015222.1 PFAM: Fatty acid desaturase, type 1; KEGG: nmu:Nmul_A2141 fatty acid desaturase; fatty acid desaturase 1379263 10297967 NAL212_1449 Nitrosomonas sp. AL212 fatty acid desaturase YP_004294498.1 1378073 D 153948 CDS YP_004294499.1 325982097 10297968 complement(1379312..1379467) 1 NC_015222.1 KEGG: mfa:Mfla_0311 50S ribosomal protein L33; TIGRFAM: Ribosomal protein L33; PFAM: Ribosomal protein L33; 50S ribosomal protein L33 1379467 10297968 NAL212_1450 Nitrosomonas sp. AL212 50S ribosomal protein L33 YP_004294499.1 1379312 R 153948 CDS YP_004294500.1 325982098 10297969 complement(1379507..1379743) 1 NC_015222.1 KEGG: neu:NE1465 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; PFAM: Ribosomal protein L28; 50S ribosomal protein L28 1379743 10297969 NAL212_1451 Nitrosomonas sp. AL212 50S ribosomal protein L28 YP_004294500.1 1379507 R 153948 CDS YP_004294501.1 325982099 10297970 complement(1379801..1380475) 1 NC_015222.1 KEGG: nmu:Nmul_A2138 DNA repair protein RadC; TIGRFAM: Uncharacterised protein family UPF0758; PFAM: Uncharacterised protein family UPF0758; DNA repair protein RadC 1380475 10297970 NAL212_1452 Nitrosomonas sp. AL212 DNA repair protein RadC YP_004294501.1 1379801 R 153948 CDS YP_004294502.1 325982100 10297971 1380675..1381901 1 NC_015222.1 TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; KEGG: nmu:Nmul_A2137 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 1381901 10297971 NAL212_1453 Nitrosomonas sp. AL212 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase YP_004294502.1 1380675 D 153948 CDS YP_004294503.1 325982101 10297972 1381885..1382337 1 NC_015222.1 PFAM: DeoxyUTP pyrophosphatase domain; TIGRFAM: DeoxyUTP pyrophosphatase; HAMAP: DeoxyUTP pyrophosphatase; KEGG: nmu:Nmul_A2136 deoxyuridine 5'-triphosphate nucleotidohydrolase; deoxyuridine 5'-triphosphate nucleotidohydrolase 1382337 10297972 NAL212_1454 Nitrosomonas sp. AL212 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_004294503.1 1381885 D 153948 CDS YP_004294504.1 325982102 10297974 complement(1383445..1384794) 1 NC_015222.1 TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, M-domain; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: nmu:Nmul_A2134 signal recognition particle protein; SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core; signal recognition particle protein 1384794 10297974 NAL212_1456 Nitrosomonas sp. AL212 signal recognition particle protein YP_004294504.1 1383445 R 153948 CDS YP_004294505.1 325982103 10297975 1384931..1385773 1 NC_015222.1 PFAM: Cytochrome c assembly protein; KEGG: nmu:Nmul_A2133 cytochrome c assembly protein; cytochrome c assembly protein 1385773 10297975 NAL212_1457 Nitrosomonas sp. AL212 cytochrome c assembly protein YP_004294505.1 1384931 D 153948 CDS YP_004294506.1 325982104 10297976 complement(1388542..1388829) 1 NC_015222.1 TIGRFAM: CRISPR associated protein Cas2; KEGG: avn:Avin_31570 CRISPR-associated protein Cas2; CRISPR-associated protein Cas2 1388829 10297976 NAL212_1458 Nitrosomonas sp. AL212 CRISPR-associated protein Cas2 YP_004294506.1 1388542 R 153948 CDS YP_004294507.1 325982105 10297977 complement(1388848..1389882) 1 NC_015222.1 KEGG: cvi:CV_1229 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas1, DVULG subtype; CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1; CRISPR-associated protein Cas1 1389882 10297977 NAL212_1459 Nitrosomonas sp. AL212 CRISPR-associated protein Cas1 YP_004294507.1 1388848 R 153948 CDS YP_004294508.1 325982106 10297978 complement(1389885..1390520) 1 NC_015222.1 KEGG: cvi:CV_1228 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas4; PFAM: Dna2/Cas4, domain of unknown function DUF83; CRISPR-associated protein Cas4 1390520 10297978 NAL212_1460 Nitrosomonas sp. AL212 CRISPR-associated protein Cas4 YP_004294508.1 1389885 R 153948 CDS YP_004294509.1 325982107 10297979 complement(1390551..1390727) 1 NC_015222.1 KEGG: kla:KLLA0E07789g hypothetical protein; hypothetical protein 1390727 10297979 NAL212_1461 Nitrosomonas sp. AL212 hypothetical protein YP_004294509.1 1390551 R 153948 CDS YP_004294510.1 325982108 10297980 complement(1390738..1391613) 1 NC_015222.1 KEGG: mfa:Mfla_0604 CRISPR-associated Csh2 family protein; TIGRFAM: CRISPR-associated protein Csd2; CRISPR-associated protein TM1801; PFAM: CRISPR-associated protein TM1801; CRISPR-associated protein, Csd2 family 1391613 10297980 NAL212_1462 Nitrosomonas sp. AL212 CRISPR-associated protein, Csd2 family YP_004294510.1 1390738 R 153948 CDS YP_004294511.1 325982109 10297981 complement(1391625..1393451) 1 NC_015222.1 KEGG: mfa:Mfla_0603 CRISPR-associated Csd1 family protein; TIGRFAM: CRISPR-associated protein, Csd1-type; PFAM: CRISPR-associated protein, Csd1-type; CRISPR-associated protein, Csd1 family 1393451 10297981 NAL212_1463 Nitrosomonas sp. AL212 CRISPR-associated protein, Csd1 family YP_004294511.1 1391625 R 153948 CDS YP_004294512.1 325982110 10297982 complement(1393448..1394131) 1 NC_015222.1 KEGG: mfa:Mfla_0602 CRISPR-associated Cas5d family protein; TIGRFAM: CRISPR-associated protein, Cas5d-type; CRISPR-associated protein Cas5, N-terminal domain; PFAM: CRISPR-associated protein, Cas5; CRISPR-associated protein Cas5 family 1394131 10297982 NAL212_1464 Nitrosomonas sp. AL212 CRISPR-associated protein Cas5 family YP_004294512.1 1393448 R 153948 CDS YP_004294513.1 325982111 10297983 complement(1394153..1396417) 1 NC_015222.1 TIGRFAM: CRISPR-associated HD domain; Helicase Cas3, CRISPR-associated, core; Uncharacterised protein family HDIG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Metal-dependent phosphohydrolase, HD subdomain; KEGG: mfa:Mfla_0601 metal dependent phosphohydrolase; SMART: DEAD-like helicase, N-terminal; Metal-dependent phosphohydrolase, HD domain; metal dependent phosphohydrolase 1396417 10297983 NAL212_1465 Nitrosomonas sp. AL212 metal dependent phosphohydrolase YP_004294513.1 1394153 R 153948 CDS YP_004294514.1 325982112 10297988 complement(1397536..1401039) 1 NC_015222.1 SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: nmu:Nmul_A2731 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA polymerase III subunit alpha 1401039 10297988 NAL212_1467 Nitrosomonas sp. AL212 DNA polymerase III subunit alpha YP_004294514.1 1397536 R 153948 CDS YP_004294515.1 325982113 10297989 1401102..1402469 1 NC_015222.1 PFAM: Peptidase U32; KEGG: neu:NE1979 U32 family peptidase; peptidase U32 1402469 10297989 NAL212_1468 Nitrosomonas sp. AL212 peptidase U32 YP_004294515.1 1401102 D 153948 CDS YP_004294516.1 325982114 10297990 complement(1402425..1403474) 1 NC_015222.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: neu:NE1289 esterase/lipase/thioesterase family protein; alpha/beta hydrolase fold protein 1403474 10297990 NAL212_1469 Nitrosomonas sp. AL212 alpha/beta hydrolase fold protein YP_004294516.1 1402425 R 153948 CDS YP_004294517.1 325982115 10297991 complement(1403776..1404999) 1 NC_015222.1 KEGG: dal:Dalk_5147 peptidoglycan-binding domain 1 protein; PFAM: Type II secretion system protein E; SMART: ATPase, AAA+ type, core; type II secretion system protein E 1404999 10297991 NAL212_1470 Nitrosomonas sp. AL212 type II secretion system protein E YP_004294517.1 1403776 R 153948 CDS YP_004294518.1 325982116 10297992 complement(1404999..1405712) 1 NC_015222.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: chu:CHU_2436 outer membrane protein; OmpA/MotB domain-containing protein 1405712 10297992 NAL212_1471 Nitrosomonas sp. AL212 OmpA/MotB domain-containing protein YP_004294518.1 1404999 R 153948 CDS YP_004294519.1 325982117 10297993 1405884..1406084 1 NC_015222.1 hypothetical protein 1406084 10297993 NAL212_1472 Nitrosomonas sp. AL212 hypothetical protein YP_004294519.1 1405884 D 153948 CDS YP_004294520.1 325982118 10297994 1406169..1407440 1 NC_015222.1 KEGG: ssm:Spirs_2557 hypothetical protein; hypothetical protein 1407440 10297994 NAL212_1473 Nitrosomonas sp. AL212 hypothetical protein YP_004294520.1 1406169 D 153948 CDS YP_004294521.1 325982119 10297995 complement(1407639..1409240) 1 NC_015222.1 KEGG: tbd:Tbd_1578 MFS family transporter; manually curated; PFAM: Major facilitator superfamily, enterobactin exporter EntS; hypothetical protein 1409240 10297995 NAL212_1474 Nitrosomonas sp. AL212 hypothetical protein YP_004294521.1 1407639 R 153948 CDS YP_004294522.1 325982120 10297996 complement(1409486..1410280) 1 NC_015222.1 KEGG: net:Neut_1628 carbonate dehydratase; PFAM: Carbonic anhydrase, alpha-class, catalytic domain; carbonate dehydratase 1410280 10297996 NAL212_1475 Nitrosomonas sp. AL212 carbonate dehydratase YP_004294522.1 1409486 R 153948 CDS YP_004294523.1 325982121 10297997 complement(1410312..1410566) 1 NC_015222.1 KEGG: neu:NE0605 hypothetical protein; hypothetical protein 1410566 10297997 NAL212_1476 Nitrosomonas sp. AL212 hypothetical protein YP_004294523.1 1410312 R 153948 CDS YP_004294524.1 325982122 10297998 1411142..1413658 1 NC_015222.1 PFAM: Acyl-CoA dehydrogenase, C-termina, bacterial type; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; KEGG: neu:NE1548 acyl-CoA dehydrogenase; hypothetical protein 1413658 10297998 NAL212_1477 Nitrosomonas sp. AL212 hypothetical protein YP_004294524.1 1411142 D 153948 CDS YP_004294525.1 325982123 10297999 1413723..1415579 1 NC_015222.1 KEGG: neu:NE1549 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; long-chain-fatty-acid--CoA ligase 1415579 10297999 NAL212_1478 Nitrosomonas sp. AL212 long-chain-fatty-acid--CoA ligase YP_004294525.1 1413723 D 153948 CDS YP_004294526.1 325982124 10298001 1416629..1416988 1 NC_015222.1 KEGG: slt:Slit_2774 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 1416988 10298001 NAL212_1480 Nitrosomonas sp. AL212 HNH endonuclease YP_004294526.1 1416629 D 153948 CDS YP_004294527.1 325982125 10298002 1417103..1417543 1 NC_015222.1 KEGG: sil:SPO2326 hypothetical protein; hypothetical protein 1417543 10298002 NAL212_1481 Nitrosomonas sp. AL212 hypothetical protein YP_004294527.1 1417103 D 153948 CDS YP_004294528.1 325982126 10298003 complement(1417538..1418062) 1 NC_015222.1 manually curated; PFAM: Histidine phosphatase superfamily, clade-1; KEGG: nhl:Nhal_1105 phosphoglycerate mutase; SMART: Histidine phosphatase superfamily, clade-1; putative phosphohistidine phosphatase, SixA 1418062 10298003 NAL212_1482 Nitrosomonas sp. AL212 putative phosphohistidine phosphatase, SixA YP_004294528.1 1417538 R 153948 CDS YP_004294529.1 325982127 10298004 1418121..1419605 1 NC_015222.1 TIGRFAM: Exopolyphosphatase; KEGG: abo:ABO_2461 hypothetical protein; PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase 1419605 10298004 NAL212_1483 Nitrosomonas sp. AL212 Ppx/GppA phosphatase YP_004294529.1 1418121 D 153948 CDS YP_004294530.1 325982128 10298005 complement(1419629..1421710) 1 NC_015222.1 PFAM: Polyphosphate kinase; TIGRFAM: Polyphosphate kinase; HAMAP: Polyphosphate kinase; KEGG: nhl:Nhal_2311 polyphosphate kinase; polyphosphate kinase 1421710 10298005 NAL212_1484 Nitrosomonas sp. AL212 polyphosphate kinase YP_004294530.1 1419629 R 153948 CDS YP_004294531.1 325982129 10298006 complement(1421812..1422897) 1 NC_015222.1 KEGG: tin:Tint_1847 glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase 1422897 10298006 NAL212_1485 Nitrosomonas sp. AL212 glucose sorbosone dehydrogenase YP_004294531.1 1421812 R 153948 CDS YP_004294532.1 325982130 10298007 complement(1423021..1424148) 1 NC_015222.1 KEGG: geo:Geob_1384 glycosyl transferase group 1; hypothetical protein 1424148 10298007 NAL212_1486 Nitrosomonas sp. AL212 hypothetical protein YP_004294532.1 1423021 R 153948 CDS YP_004294533.1 325982131 10298008 complement(1424185..1424997) 1 NC_015222.1 PFAM: Aldehyde-lyase domain; KEGG: mvn:Mevan_0407 HpcH/HpaI aldolase; HpcH/HpaI aldolase 1424997 10298008 NAL212_1487 Nitrosomonas sp. AL212 HpcH/HpaI aldolase YP_004294533.1 1424185 R 153948 CDS YP_004294534.1 325982132 10298009 complement(1425048..1425560) 1 NC_015222.1 KEGG: dfe:Dfer_3931 dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase 1425560 10298009 NAL212_1488 Nitrosomonas sp. AL212 dTDP-4-dehydrorhamnose 3,5-epimerase YP_004294534.1 1425048 R 153948 CDS YP_004294535.1 325982133 10298010 complement(1425760..1427847) 1 NC_015222.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: caa:Caka_1487 TonB-dependent receptor; TonB-dependent receptor 1427847 10298010 NAL212_1489 Nitrosomonas sp. AL212 TonB-dependent receptor YP_004294535.1 1425760 R 153948 CDS YP_004294536.1 325982134 10298011 complement(1428127..1428600) 1 NC_015222.1 PFAM: Domain of unknown function DUF2874; KEGG: mca:MCA1928 hypothetical protein; hypothetical protein 1428600 10298011 NAL212_1490 Nitrosomonas sp. AL212 hypothetical protein YP_004294536.1 1428127 R 153948 CDS YP_004294537.1 325982135 10298012 1428916..1429713 1 NC_015222.1 KEGG: nhl:Nhal_3531 hypothetical protein; hypothetical protein 1429713 10298012 NAL212_1491 Nitrosomonas sp. AL212 hypothetical protein YP_004294537.1 1428916 D 153948 CDS YP_004294538.1 325982136 10298013 1429759..1429947 1 NC_015222.1 hypothetical protein 1429947 10298013 NAL212_1492 Nitrosomonas sp. AL212 hypothetical protein YP_004294538.1 1429759 D 153948 CDS YP_004294539.1 325982137 10298014 complement(1429938..1430918) 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: atu:Atu4436 IS5 family transposase; transposase IS4 family protein 1430918 10298014 NAL212_1493 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004294539.1 1429938 R 153948 CDS YP_004294540.1 325982138 10298015 complement(1431137..1434430) 1 NC_015222.1 KEGG: nmu:Nmul_A1113 heavy metal efflux pump CzcA; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; CzcA family heavy metal efflux pump 1434430 10298015 NAL212_1494 Nitrosomonas sp. AL212 CzcA family heavy metal efflux pump YP_004294540.1 1431137 R 153948 CDS YP_004294541.1 325982139 10298016 1434612..1434908 1 NC_015222.1 KEGG: dat:HRM2_44620 hypothetical protein; hypothetical protein 1434908 10298016 NAL212_1495 Nitrosomonas sp. AL212 hypothetical protein YP_004294541.1 1434612 D 153948 CDS YP_004294542.1 325982140 10298017 1434896..1435246 1 NC_015222.1 KEGG: eba:ebB55 transposase, fragment; manually curated; PFAM: Transposase (putative), IS66 Orf2-like; IS66 Orf2 family protein 1435246 10298017 NAL212_1496 Nitrosomonas sp. AL212 IS66 Orf2 family protein YP_004294542.1 1434896 D 153948 CDS YP_004294543.1 325982141 10298018 1435300..1436883 1 NC_015222.1 PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase; transposase IS66 1436883 10298018 NAL212_1497 Nitrosomonas sp. AL212 transposase IS66 YP_004294543.1 1435300 D 153948 CDS YP_004294544.1 325982142 10298019 1437138..1437260 1 NC_015222.1 hypothetical protein 1437260 10298019 NAL212_1498 Nitrosomonas sp. AL212 hypothetical protein YP_004294544.1 1437138 D 153948 CDS YP_004294545.1 325982143 10298020 complement(1437302..1439989) 1 NC_015222.1 PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: rce:RC1_0095 type III restriction enzyme, res subunit, putative; type III restriction protein res subunit 1439989 10298020 NAL212_1499 Nitrosomonas sp. AL212 type III restriction protein res subunit YP_004294545.1 1437302 R 153948 CDS YP_004294546.1 325982144 10298021 complement(1439986..1440165) 1 NC_015222.1 KEGG: gca:Galf_1665 hypothetical protein; hypothetical protein 1440165 10298021 NAL212_1500 Nitrosomonas sp. AL212 hypothetical protein YP_004294546.1 1439986 R 153948 CDS YP_004294547.1 325982145 10298022 complement(1440162..1440677) 1 NC_015222.1 PFAM: Zeta toxin; KEGG: gca:Galf_1664 hypothetical protein; Zeta toxin family protein 1440677 10298022 NAL212_1501 Nitrosomonas sp. AL212 Zeta toxin family protein YP_004294547.1 1440162 R 153948 CDS YP_004294548.1 325982146 10298023 complement(1440674..1440805) 1 NC_015222.1 hypothetical protein 1440805 10298023 NAL212_1502 Nitrosomonas sp. AL212 hypothetical protein YP_004294548.1 1440674 R 153948 CDS YP_004294549.1 325982147 10298024 complement(1440802..1442499) 1 NC_015222.1 PFAM: DNA methylase N-4/N-6; KEGG: avn:Avin_52350 adenine specific DNA methylase N-4/N-6; DNA methylase N-4/N-6 domain-containing protein 1442499 10298024 NAL212_1503 Nitrosomonas sp. AL212 DNA methylase N-4/N-6 domain-containing protein YP_004294549.1 1440802 R 153948 CDS YP_004294550.1 325982148 10298026 complement(1443122..1443904) 1 NC_015222.1 KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 1443904 10298026 NAL212_1505 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004294550.1 1443122 R 153948 CDS YP_004294551.1 325982149 10298027 complement(1443901..1444923) 1 NC_015222.1 PFAM: Integrase, catalytic core; Resolvase, helix-turn-helix domain; KEGG: pst:PSPTO_B0040 ISPsy4, transposase; integrase catalytic region 1444923 10298027 NAL212_1506 Nitrosomonas sp. AL212 integrase catalytic region YP_004294551.1 1443901 R 153948 CDS YP_004294552.1 325982150 10298030 complement(1447949..1448791) 1 NC_015222.1 PFAM: KilA, N-terminal/APSES-type HTH, DNA-binding; KEGG: plu:plu1205 hypothetical protein; KilA, /APSES-type HTH DNA-binding domain 1448791 10298030 NAL212_1509 Nitrosomonas sp. AL212 KilA, /APSES-type HTH DNA-binding domain YP_004294552.1 1447949 R 153948 CDS YP_004294553.1 325982151 10298031 complement(1448943..1451798) 1 NC_015222.1 KEGG: rce:RC1_0099 helicase, SNF2 family, putative; PFAM: SNF2-related; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SNF2-like protein 1451798 10298031 NAL212_1510 Nitrosomonas sp. AL212 SNF2-like protein YP_004294553.1 1448943 R 153948 CDS YP_004294554.1 325982152 10298032 1452079..1452435 1 NC_015222.1 KEGG: tgr:Tgr7_1426 hypothetical protein; hypothetical protein 1452435 10298032 NAL212_1511 Nitrosomonas sp. AL212 hypothetical protein YP_004294554.1 1452079 D 153948 CDS YP_004294555.1 325982153 10298033 1452432..1452887 1 NC_015222.1 KEGG: dth:DICTH_0549 MalF protein; hypothetical protein 1452887 10298033 NAL212_1512 Nitrosomonas sp. AL212 hypothetical protein YP_004294555.1 1452432 D 153948 CDS YP_004294556.1 325982154 10298035 complement(1453174..1454403) 1 NC_015222.1 KEGG: neu:NE2132 aspartate kinase; TIGRFAM: Aspartate kinase domain; Aspartate kinase, monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; aspartate kinase 1454403 10298035 NAL212_1513 Nitrosomonas sp. AL212 aspartate kinase YP_004294556.1 1453174 R 153948 CDS YP_004294557.1 325982155 10298036 complement(1454617..1455627) 1 NC_015222.1 TIGRFAM: Tetraacyldisaccharide 4'-kinase; KEGG: net:Neut_2110 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4'-kinase 1455627 10298036 NAL212_1514 Nitrosomonas sp. AL212 tetraacyldisaccharide 4'-kinase YP_004294557.1 1454617 R 153948 CDS YP_004294558.1 325982156 10298037 1455902..1456810 1 NC_015222.1 KEGG: neu:NE0456 esterase/lipase/thioesterase family protein; esterase/lipase/thioesterase family protein 1456810 10298037 NAL212_1515 Nitrosomonas sp. AL212 esterase/lipase/thioesterase family protein YP_004294558.1 1455902 D 153948 CDS YP_004294559.1 325982157 10298038 complement(1456904..1458586) 1 NC_015222.1 KEGG: neu:NE0783 hypothetical protein; hypothetical protein 1458586 10298038 NAL212_1516 Nitrosomonas sp. AL212 hypothetical protein YP_004294559.1 1456904 R 153948 CDS YP_004294560.1 325982158 10298039 complement(1458873..1459733) 1 NC_015222.1 PFAM: Radical SAM; KEGG: neu:NE1518 hypothetical protein; Radical SAM domain-containing protein 1459733 10298039 NAL212_1517 Nitrosomonas sp. AL212 Radical SAM domain-containing protein YP_004294560.1 1458873 R 153948 CDS YP_004294561.1 325982159 10298040 1459775..1460224 1 NC_015222.1 TIGRFAM: queuosine biosynthesis protein QueD; KEGG: nmu:Nmul_A1944 putative 6-pyruvoyl tetrahydropterin synthase; queuosine biosynthesis protein QueD 1460224 10298040 NAL212_1518 Nitrosomonas sp. AL212 queuosine biosynthesis protein QueD YP_004294561.1 1459775 D 153948 CDS YP_004294562.1 325982160 10298041 1460246..1461028 1 NC_015222.1 KEGG: neu:NE1516 hypothetical protein; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related; TatD family hydrolase 1461028 10298041 NAL212_1519 Nitrosomonas sp. AL212 TatD family hydrolase YP_004294562.1 1460246 D 153948 CDS YP_004294563.1 325982161 10298042 1461012..1461662 1 NC_015222.1 PFAM: Ankyrin repeat; KEGG: nmu:Nmul_A1380 ankyrin; ankyrin 1461662 10298042 NAL212_1520 Nitrosomonas sp. AL212 ankyrin YP_004294563.1 1461012 D 153948 CDS YP_004294564.1 325982162 10298043 1461700..1462440 1 NC_015222.1 KEGG: nmu:Nmul_A1378 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 1462440 10298043 NAL212_1521 Nitrosomonas sp. AL212 3-oxoacyl-ACP reductase YP_004294564.1 1461700 D 153948 CDS YP_004294565.1 325982163 10298044 1462462..1463577 1 NC_015222.1 TIGRFAM: Alanine dehydrogenase/pyridine nucleotide transhydrogenase; KEGG: pla:Plav_1557 alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; alanine dehydrogenase 1463577 10298044 NAL212_1522 Nitrosomonas sp. AL212 alanine dehydrogenase YP_004294565.1 1462462 D 153948 CDS YP_004294566.1 325982164 10298045 1463743..1466118 1 NC_015222.1 PFAM: Fatty acid cis-trans isomerase; KEGG: neu:NE1330 cis/trans isomerase; fatty acid cistrans isomerase 1466118 10298045 NAL212_1523 Nitrosomonas sp. AL212 fatty acid cistrans isomerase YP_004294566.1 1463743 D 153948 CDS YP_004294567.1 325982165 10298046 1466187..1466474 1 NC_015222.1 KEGG: blb:BBMN68_1051 tas3; hypothetical protein 1466474 10298046 NAL212_1524 Nitrosomonas sp. AL212 hypothetical protein YP_004294567.1 1466187 D 153948 CDS YP_004294568.1 325982166 10298047 complement(1466508..1468169) 1 NC_015222.1 KEGG: nmu:Nmul_A0508 hypothetical protein; hypothetical protein 1468169 10298047 NAL212_1525 Nitrosomonas sp. AL212 hypothetical protein YP_004294568.1 1466508 R 153948 CDS YP_004294569.1 325982167 10298048 1468472..1468906 1 NC_015222.1 KEGG: abn:AB57_2458 hypothetical protein; hypothetical protein 1468906 10298048 NAL212_1526 Nitrosomonas sp. AL212 hypothetical protein YP_004294569.1 1468472 D 153948 CDS YP_004294570.1 325982168 10298049 1469414..1470151 1 NC_015222.1 KEGG: neu:NE2376 hypothetical protein; hypothetical protein 1470151 10298049 NAL212_1527 Nitrosomonas sp. AL212 hypothetical protein YP_004294570.1 1469414 D 153948 CDS YP_004294571.1 325982169 10298050 1470259..1470717 1 NC_015222.1 KEGG: noc:Noc_1222 hypothetical protein; hypothetical protein 1470717 10298050 NAL212_1528 Nitrosomonas sp. AL212 hypothetical protein YP_004294571.1 1470259 D 153948 CDS YP_004294572.1 325982170 10298051 1470756..1471256 1 NC_015222.1 PFAM: Redoxin; KEGG: nhl:Nhal_2589 redoxin domain protein; redoxin domain-containing protein 1471256 10298051 NAL212_1529 Nitrosomonas sp. AL212 redoxin domain-containing protein YP_004294572.1 1470756 D 153948 CDS YP_004294573.1 325982171 10298052 1471293..1471529 1 NC_015222.1 manually curated; KEGG: nhl:Nhal_2590 arginine decarboxylase; arginine decarboxylase 1471529 10298052 NAL212_1530 Nitrosomonas sp. AL212 arginine decarboxylase YP_004294573.1 1471293 D 153948 CDS YP_004294574.1 325982172 10298053 1471570..1474290 1 NC_015222.1 KEGG: nhl:Nhal_2591 hypothetical protein; hypothetical protein 1474290 10298053 NAL212_1531 Nitrosomonas sp. AL212 hypothetical protein YP_004294574.1 1471570 D 153948 CDS YP_004294575.1 325982173 10298054 1474336..1475241 1 NC_015222.1 PFAM: Thiamine synthesis ApbE/UPF0280; KEGG: nhl:Nhal_2592 ApbE family lipoprotein; ApbE family lipoprotein 1475241 10298054 NAL212_1532 Nitrosomonas sp. AL212 ApbE family lipoprotein YP_004294575.1 1474336 D 153948 CDS YP_004294576.1 325982174 10298055 1475328..1476566 1 NC_015222.1 PFAM: Lipase, class 3; KEGG: rfr:Rfer_2719 hemolysin-type calcium-binding protein; lipase class 3 1476566 10298055 NAL212_1533 Nitrosomonas sp. AL212 lipase class 3 YP_004294576.1 1475328 D 153948 CDS YP_004294577.1 325982175 10298056 1476734..1477549 1 NC_015222.1 PFAM: UPF0103/Mediator of ErbB2-driven cell motility (Memo-related); KEGG: gca:Galf_1560 hypothetical protein; hypothetical protein 1477549 10298056 NAL212_1534 Nitrosomonas sp. AL212 hypothetical protein YP_004294577.1 1476734 D 153948 CDS YP_004294578.1 325982176 10298057 1477552..1478142 1 NC_015222.1 KEGG: slt:Slit_1845 AMMECR1 domain protein; TIGRFAM: AMMECR1; PFAM: AMMECR1; AMMECR1 domain-containing protein 1478142 10298057 NAL212_1535 Nitrosomonas sp. AL212 AMMECR1 domain-containing protein YP_004294578.1 1477552 D 153948 CDS YP_004294579.1 325982177 10298058 1478135..1479232 1 NC_015222.1 PFAM: Radical SAM; KEGG: gca:Galf_1562 radical SAM domain-containing protein; Radical SAM domain-containing protein 1479232 10298058 NAL212_1536 Nitrosomonas sp. AL212 Radical SAM domain-containing protein YP_004294579.1 1478135 D 153948 CDS YP_004294580.1 325982178 10298059 complement(1479398..1479685) 1 NC_015222.1 PFAM: Protein of unknown function DUF2934; KEGG: tau:Tola_1999 hypothetical protein; hypothetical protein 1479685 10298059 NAL212_1537 Nitrosomonas sp. AL212 hypothetical protein YP_004294580.1 1479398 R 153948 CDS YP_004294581.1 325982179 10298060 complement(1480038..1480391) 1 NC_015222.1 KEGG: neu:NE1279 hypothetical protein; hypothetical protein 1480391 10298060 NAL212_1538 Nitrosomonas sp. AL212 hypothetical protein YP_004294581.1 1480038 R 153948 CDS YP_004294582.1 325982180 10298061 complement(1480632..1481081) 1 NC_015222.1 KEGG: net:Neut_0971 signal-transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; putative signal transduction protein with CBS domains 1481081 10298061 NAL212_1539 Nitrosomonas sp. AL212 putative signal transduction protein with CBS domains YP_004294582.1 1480632 R 153948 CDS YP_004294583.1 325982181 10298062 1481804..1482253 1 NC_015222.1 KEGG: ddi:DDB_G0283905 protein phosphatase 2A B55 regulatory subunit; hypothetical protein 1482253 10298062 NAL212_1540 Nitrosomonas sp. AL212 hypothetical protein YP_004294583.1 1481804 D 153948 CDS YP_004294584.1 325982182 10298063 1482423..1483316 1 NC_015222.1 KEGG: ppr:PBPRB1378 hypothetical protein; hypothetical protein 1483316 10298063 NAL212_1541 Nitrosomonas sp. AL212 hypothetical protein YP_004294584.1 1482423 D 153948 CDS YP_004294585.1 325982183 10298064 1483731..1484048 1 NC_015222.1 PFAM: Flagellar transcriptional activator; KEGG: net:Neut_0729 transcriptional activator FlhD; flagellar transcriptional activator 1484048 10298064 NAL212_1542 Nitrosomonas sp. AL212 flagellar transcriptional activator YP_004294585.1 1483731 D 153948 CDS YP_004294586.1 325982184 10298065 1484077..1484613 1 NC_015222.1 PFAM: Flagellar transcriptional activator FlhC; KEGG: net:Neut_0730 transcriptional activator FlhC; flagellar transcriptional activator FlhC 1484613 10298065 NAL212_1543 Nitrosomonas sp. AL212 flagellar transcriptional activator FlhC YP_004294586.1 1484077 D 153948 CDS YP_004294587.1 325982185 10298066 complement(1484648..1485841) 1 NC_015222.1 KEGG: nmu:Nmul_A1360 aminotransferase, class I and II; PFAM: Aminotransferase, class I/classII; aspartate transaminase 1485841 10298066 NAL212_1544 Nitrosomonas sp. AL212 aspartate transaminase YP_004294587.1 1484648 R 153948 CDS YP_004294588.1 325982186 10298067 1485921..1487951 1 NC_015222.1 SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; TIGRFAM: Excinuclease ABC, B subunit; KEGG: nmu:Nmul_A1361 excinuclease ABC subunit B; HAMAP: Excinuclease ABC, B subunit; PFAM: Helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein; UvrABC system protein B 1487951 10298067 NAL212_1545 Nitrosomonas sp. AL212 UvrABC system protein B YP_004294588.1 1485921 D 153948 CDS YP_004294589.1 325982187 10298068 complement(1487957..1488304) 1 NC_015222.1 KEGG: neu:NE0784 hypothetical protein; hypothetical protein 1488304 10298068 NAL212_1546 Nitrosomonas sp. AL212 hypothetical protein YP_004294589.1 1487957 R 153948 CDS YP_004294590.1 325982188 10298069 complement(1488355..1489179) 1 NC_015222.1 PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: nmu:Nmul_A1870 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 1489179 10298069 NAL212_1547 Nitrosomonas sp. AL212 tRNA/rRNA methyltransferase SpoU YP_004294590.1 1488355 R 153948 CDS YP_004294591.1 325982189 10298070 complement(1489226..1490530) 1 NC_015222.1 TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; KEGG: nmu:Nmul_A0819 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase, prokaryotic-type; histidinol dehydrogenase 1490530 10298070 NAL212_1548 Nitrosomonas sp. AL212 histidinol dehydrogenase YP_004294591.1 1489226 R 153948 CDS YP_004294592.1 325982190 10298071 complement(1490557..1491201) 1 NC_015222.1 TIGRFAM: ATP phosphoribosyltransferase, catalytic domain; KEGG: nmu:Nmul_A0820 ATP phosphoribosyltransferase catalytic subunit; PFAM: ATP phosphoribosyltransferase, catalytic domain; ATP phosphoribosyltransferase 1491201 10298071 NAL212_1549 Nitrosomonas sp. AL212 ATP phosphoribosyltransferase YP_004294592.1 1490557 R 153948 CDS YP_004294593.1 325982191 10298072 complement(1491214..1491855) 1 NC_015222.1 KEGG: neu:NE0870 manganese and iron superoxide dismutase; PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; Superoxide dismutase 1491855 10298072 NAL212_1550 Nitrosomonas sp. AL212 Superoxide dismutase YP_004294593.1 1491214 R 153948 CDS YP_004294594.1 325982192 10298073 complement(1491935..1492366) 1 NC_015222.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: neu:NE0869 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1492366 10298073 NAL212_1551 Nitrosomonas sp. AL212 biopolymer transport protein ExbD/TolR YP_004294594.1 1491935 R 153948 CDS YP_004294595.1 325982193 10298074 1492616..1493104 1 NC_015222.1 PFAM: Phosphoribosylaminoimidazole carboxylase, core; manually curated; KEGG: neu:NE0868 phosphoribosylaminoimidazole carboxylase catalytic subunit protein; TIGRFAM: Phosphoribosylaminoimidazole carboxylase, core; phosphoribosylaminoimidazole carboxylase catalytic subunit 1493104 10298074 NAL212_1552 Nitrosomonas sp. AL212 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_004294595.1 1492616 D 153948 CDS YP_004294596.1 325982194 10298075 1493104..1494237 1 NC_015222.1 TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: nmu:Nmul_A0611 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; phosphoribosylaminoimidazole carboxylase ATPase subunit 1494237 10298075 NAL212_1553 Nitrosomonas sp. AL212 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_004294596.1 1493104 D 153948 CDS YP_004294597.1 325982195 10298076 1494249..1495139 1 NC_015222.1 TIGRFAM: SAICAR synthetase; KEGG: neu:NE0866 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1495139 10298076 NAL212_1554 Nitrosomonas sp. AL212 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_004294597.1 1494249 D 153948 CDS YP_004294598.1 325982196 10298077 complement(1495305..1496306) 1 NC_015222.1 KEGG: nhl:Nhal_3686 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; NADPH:quinone reductase 1496306 10298077 NAL212_1555 Nitrosomonas sp. AL212 NADPH:quinone reductase YP_004294598.1 1495305 R 153948 CDS YP_004294599.1 325982197 10298078 complement(1496343..1496579) 1 NC_015222.1 PFAM: Protein of unknown function DUF465; KEGG: cps:CPS_0008 hypothetical protein; hypothetical protein 1496579 10298078 NAL212_1556 Nitrosomonas sp. AL212 hypothetical protein YP_004294599.1 1496343 R 153948 CDS YP_004294600.1 325982198 10298079 1496916..1497530 1 NC_015222.1 SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, haem export, CcmA; KEGG: nmu:Nmul_A1217 cytochrome c biogenesis protein CcmA; PFAM: ABC transporter-like; heme exporter protein CcmA 1497530 10298079 NAL212_1557 Nitrosomonas sp. AL212 heme exporter protein CcmA YP_004294600.1 1496916 D 153948 CDS YP_004294601.1 325982199 10298080 1497538..1498191 1 NC_015222.1 KEGG: nmu:Nmul_A1216 heme exporter protein CcmB; TIGRFAM: Cytochrome c-type biogenesis protein CcmB; PFAM: Cytochrome c-type biogenesis protein CcmB; heme exporter protein CcmB 1498191 10298080 NAL212_1558 Nitrosomonas sp. AL212 heme exporter protein CcmB YP_004294601.1 1497538 D 153948 CDS YP_004294602.1 325982200 10298081 1498357..1499103 1 NC_015222.1 KEGG: nmu:Nmul_A1212 heme exporter protein CcmC; TIGRFAM: Cytochrome c-type biogenesis protein CcmC; PFAM: Cytochrome c assembly protein; heme exporter protein CcmC 1499103 10298081 NAL212_1559 Nitrosomonas sp. AL212 heme exporter protein CcmC YP_004294602.1 1498357 D 153948 CDS YP_004294603.1 325982201 10298082 1499100..1499297 1 NC_015222.1 KEGG: nmu:Nmul_A1211 hypothetical protein; manually curated; TIGRFAM: Haem exporter protein D (CcmD); heme exporter protein CcmD 1499297 10298082 NAL212_1560 Nitrosomonas sp. AL212 heme exporter protein CcmD YP_004294603.1 1499100 D 153948 CDS YP_004294604.1 325982202 10298083 1499281..1499730 1 NC_015222.1 PFAM: CcmE/CycJ protein; KEGG: neu:NE0767 cytochrome c-type biogenesis protein CcmE; CcmE/CycJ protein 1499730 10298083 NAL212_1561 Nitrosomonas sp. AL212 CcmE/CycJ protein YP_004294604.1 1499281 D 153948 CDS YP_004294605.1 325982203 10298084 1499815..1501869 1 NC_015222.1 KEGG: neu:NE0768 cytochrome c-type biogenesis protein (CcmF); TIGRFAM: Cytochrome c-type biogenesis protein CcmF; PFAM: Cytochrome c assembly protein; cytochrome c-type biogenesis protein CcmF 1501869 10298084 NAL212_1562 Nitrosomonas sp. AL212 cytochrome c-type biogenesis protein CcmF YP_004294605.1 1499815 D 153948 CDS YP_004294606.1 325982204 10298085 1501866..1502396 1 NC_015222.1 KEGG: net:Neut_1637 periplasmic protein thiol--disulphide oxidoreductase DsbE; TIGRFAM: Periplasmic protein thiol:disulphide oxidoreductase DsbE; PFAM: Redoxin; protein thiol/disulfide oxidoreductase DsbE 1502396 10298085 NAL212_1563 Nitrosomonas sp. AL212 protein thiol/disulfide oxidoreductase DsbE YP_004294606.1 1501866 D 153948 CDS YP_004294607.1 325982205 10298086 1502430..1502930 1 NC_015222.1 PFAM: Cytochrome C biogenesis protein CcmH; KEGG: nmu:Nmul_A1207 cytochrome c biogenesis protein; cytochrome C biogenesis protein 1502930 10298086 NAL212_1564 Nitrosomonas sp. AL212 cytochrome C biogenesis protein YP_004294607.1 1502430 D 153948 CDS YP_004294608.1 325982206 10298087 1502927..1504258 1 NC_015222.1 TIGRFAM: Cytochrome c-type biogenesis protein CcmI; KEGG: neu:NE0771 TPR repeat-containing protein; cytochrome c-type biogenesis protein CcmI 1504258 10298087 NAL212_1565 Nitrosomonas sp. AL212 cytochrome c-type biogenesis protein CcmI YP_004294608.1 1502927 D 153948 CDS YP_004294609.1 325982207 10298088 1504262..1504732 1 NC_015222.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: nmu:Nmul_A1945 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 1504732 10298088 NAL212_1566 Nitrosomonas sp. AL212 alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen YP_004294609.1 1504262 D 153948 CDS YP_004294610.1 325982208 10298089 complement(1505011..1505616) 1 NC_015222.1 TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; KEGG: net:Neut_1918 cob(I)alamin adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; cob(I)alamin adenosyltransferase 1505616 10298089 NAL212_1567 Nitrosomonas sp. AL212 cob(I)alamin adenosyltransferase YP_004294610.1 1505011 R 153948 CDS YP_004294611.1 325982209 10298090 complement(1505621..1506199) 1 NC_015222.1 KEGG: neu:NE0635 hypothetical protein; hypothetical protein 1506199 10298090 NAL212_1568 Nitrosomonas sp. AL212 hypothetical protein YP_004294611.1 1505621 R 153948 CDS YP_004294612.1 325982210 10298091 complement(1506214..1508067) 1 NC_015222.1 KEGG: net:Neut_1916 TonB-dependent vitamin B12 receptor; TIGRFAM: TonB-dependent vitamin B12 receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; TonB-dependent vitamin B12 receptor 1508067 10298091 NAL212_1569 Nitrosomonas sp. AL212 TonB-dependent vitamin B12 receptor YP_004294612.1 1506214 R 153948 CDS YP_004294613.1 325982211 10298092 complement(1508617..1510332) 1 NC_015222.1 KEGG: nhl:Nhal_0193 CHRD domain containing protein; hypothetical protein 1510332 10298092 NAL212_1570 Nitrosomonas sp. AL212 hypothetical protein YP_004294613.1 1508617 R 153948 CDS YP_004294614.1 325982212 10298093 1510676..1512100 1 NC_015222.1 KEGG: nhl:Nhal_2423 hypothetical protein; hypothetical protein 1512100 10298093 NAL212_1571 Nitrosomonas sp. AL212 hypothetical protein YP_004294614.1 1510676 D 153948 CDS YP_004294615.1 325982213 10298094 1512103..1513116 1 NC_015222.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: tgr:Tgr7_0559 succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase 1513116 10298094 NAL212_1572 Nitrosomonas sp. AL212 succinylglutamate desuccinylase/aspartoacylase YP_004294615.1 1512103 D 153948 CDS YP_004294616.1 325982214 10298095 complement(1513188..1514303) 1 NC_015222.1 PFAM: Transglutaminase-like; KEGG: net:Neut_1183 twin-arginine translocation pathway signal; transglutaminase domain-containing protein 1514303 10298095 NAL212_1573 Nitrosomonas sp. AL212 transglutaminase domain-containing protein YP_004294616.1 1513188 R 153948 CDS YP_004294617.1 325982215 10298096 1514398..1515093 1 NC_015222.1 KEGG: net:Neut_1182 carboxylesterase; PFAM: Phospholipase/carboxylesterase; carboxylesterase 1515093 10298096 NAL212_1574 Nitrosomonas sp. AL212 carboxylesterase YP_004294617.1 1514398 D 153948 CDS YP_004294618.1 325982216 10298097 1515367..1516530 1 NC_015222.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: nmu:Nmul_A2541 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal; S-adenosylmethionine synthetase 1516530 10298097 NAL212_1575 Nitrosomonas sp. AL212 S-adenosylmethionine synthetase YP_004294618.1 1515367 D 153948 CDS YP_004294619.1 325982217 10298098 1516680..1518113 1 NC_015222.1 TIGRFAM: Adenosylhomocysteinase; KEGG: neu:NE0660 S-adenosyl-L-homocysteine hydrolase; PFAM: Adenosylhomocysteinase; S-adenosyl-L-homocysteine hydrolase, NAD binding; adenosylhomocysteinase 1518113 10298098 NAL212_1576 Nitrosomonas sp. AL212 adenosylhomocysteinase YP_004294619.1 1516680 D 153948 CDS YP_004294620.1 325982218 10298099 1518257..1519117 1 NC_015222.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: nmu:Nmul_A2539 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 1519117 10298099 NAL212_1577 Nitrosomonas sp. AL212 5,10-methylenetetrahydrofolate reductase YP_004294620.1 1518257 D 153948 CDS YP_004294621.1 325982219 10298100 1519285..1519974 1 NC_015222.1 KEGG: nmu:Nmul_A0356 hypothetical protein; hypothetical protein 1519974 10298100 NAL212_1578 Nitrosomonas sp. AL212 hypothetical protein YP_004294621.1 1519285 D 153948 CDS YP_004294622.1 325982220 10298101 1520066..1520926 1 NC_015222.1 KEGG: nmu:Nmul_A0357 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; methylenetetrahydrofolate dehydrogenase 1520926 10298101 NAL212_1579 Nitrosomonas sp. AL212 methylenetetrahydrofolate dehydrogenase YP_004294622.1 1520066 D 153948 CDS YP_004294623.1 325982221 10298102 1520963..1523623 1 NC_015222.1 TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; KEGG: neu:NE0361 pyruvate dehydrogenase subunit E1; PFAM: Transketolase, N-terminal; 2-oxo-acid dehydrogenase E1 subunit, homodimeric type 1523623 10298102 NAL212_1580 Nitrosomonas sp. AL212 2-oxo-acid dehydrogenase E1 subunit, homodimeric type YP_004294623.1 1520963 D 153948 CDS YP_004294624.1 325982222 10298103 1523707..1525017 1 NC_015222.1 KEGG: neu:NE0360 branched-chain alpha-keto acid dehydrogenase subunit E2; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; dihydrolipoyllysine-residue acetyltransferase 1525017 10298103 NAL212_1581 Nitrosomonas sp. AL212 dihydrolipoyllysine-residue acetyltransferase YP_004294624.1 1523707 D 153948 CDS YP_004294625.1 325982223 10298104 1525047..1525724 1 NC_015222.1 PFAM: Cytidylyltransferase; Nicotinamide mononucleotide adenylyltransferase, C-terminal; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; HAMAP: Probable nicotinate-nucleotide adenylyltransferase; KEGG: neu:NE0359 cytidylyltransferase; nicotinate-nucleotide adenylyltransferase 1525724 10298104 NAL212_1582 Nitrosomonas sp. AL212 nicotinate-nucleotide adenylyltransferase YP_004294625.1 1525047 D 153948 CDS YP_004294626.1 325982224 10298105 1525721..1526047 1 NC_015222.1 KEGG: eba:ebA3971 hypothetical protein; TIGRFAM: Ribosome-associated, Iojap-like; PFAM: Ribosome-associated, Iojap-like; iojap family protein 1526047 10298105 NAL212_1583 Nitrosomonas sp. AL212 iojap family protein YP_004294626.1 1525721 D 153948 CDS YP_004294627.1 325982225 10298106 1526081..1526551 1 NC_015222.1 PFAM: SPOUT methyltransferase, predicted; KEGG: nmu:Nmul_A0362 hypothetical protein; SPOUT methyltransferase 1526551 10298106 NAL212_1584 Nitrosomonas sp. AL212 SPOUT methyltransferase YP_004294627.1 1526081 D 153948 CDS YP_004294628.1 325982226 10298107 1526659..1527276 1 NC_015222.1 KEGG: net:Neut_1613 maf protein; TIGRFAM: Maf-like protein; PFAM: Maf-like protein; maf protein 1527276 10298107 NAL212_1585 Nitrosomonas sp. AL212 maf protein YP_004294628.1 1526659 D 153948 CDS YP_004294629.1 325982227 10298108 1527377..1528831 1 NC_015222.1 TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA-binding domain; KEGG: net:Neut_1614 ribonuclease, Rne/Rng family protein; SMART: RNA-binding domain, S1; ribonuclease, Rne/Rng family 1528831 10298108 NAL212_1586 Nitrosomonas sp. AL212 ribonuclease, Rne/Rng family YP_004294629.1 1527377 D 153948 CDS YP_004294630.1 325982228 10298109 1529022..1530239 1 NC_015222.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: nmu:Nmul_A0398 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; 3-oxoacyl-ACP synthase II 1530239 10298109 NAL212_1587 Nitrosomonas sp. AL212 3-oxoacyl-ACP synthase II YP_004294630.1 1529022 D 153948 CDS YP_004294631.1 325982229 10298110 1530255..1530509 1 NC_015222.1 PFAM: Phosphopantetheine-binding; KEGG: nmu:Nmul_A0397 phosphopantetheine-binding; phosphopantetheine-binding protein 1530509 10298110 NAL212_1588 Nitrosomonas sp. AL212 phosphopantetheine-binding protein YP_004294631.1 1530255 D 153948 CDS YP_004294632.1 325982230 10298111 1531039..1531449 1 NC_015222.1 PFAM: Transcription elongation factor, GreA/GreB, C-terminal; KEGG: pmy:Pmen_0271 nucleoside diphosphate kinase regulator; GreA/GreB family elongation factor 1531449 10298111 NAL212_1589 Nitrosomonas sp. AL212 GreA/GreB family elongation factor YP_004294632.1 1531039 D 153948 CDS YP_004294633.1 325982231 10298112 complement(1531465..1532652) 1 NC_015222.1 PFAM: Haemolysin-type calcium-binding repeat; KEGG: gsu:GSU3176 LysM domain-containing protein; hemolysin-type calcium-binding protein 1532652 10298112 NAL212_1590 Nitrosomonas sp. AL212 hemolysin-type calcium-binding protein YP_004294633.1 1531465 R 153948 CDS YP_004294634.1 325982232 10298113 complement(1532700..1533221) 1 NC_015222.1 TIGRFAM: Methionine sulphoxide reductase B; KEGG: app:CAP2UW1_3719 methionine-R-sulfoxide reductase; PFAM: Methionine sulphoxide reductase B; methionine-R-sulfoxide reductase 1533221 10298113 NAL212_1591 Nitrosomonas sp. AL212 methionine-R-sulfoxide reductase YP_004294634.1 1532700 R 153948 CDS YP_004294635.1 325982233 10298115 1534282..1534842 1 NC_015222.1 KEGG: nmu:Nmul_A0945 hypothetical protein; hypothetical protein 1534842 10298115 NAL212_1593 Nitrosomonas sp. AL212 hypothetical protein YP_004294635.1 1534282 D 153948 CDS YP_004294636.1 325982234 10298116 1534982..1535185 1 NC_015222.1 KEGG: mfa:Mfla_1053 hypothetical protein; hypothetical protein 1535185 10298116 NAL212_1594 Nitrosomonas sp. AL212 hypothetical protein YP_004294636.1 1534982 D 153948 CDS YP_004294637.1 325982235 10298118 1536623..1537138 1 NC_015222.1 KEGG: ppm:PPSC2_c2369 rtx toxins and like ca2+-binding protein; hypothetical protein 1537138 10298118 NAL212_1596 Nitrosomonas sp. AL212 hypothetical protein YP_004294637.1 1536623 D 153948 CDS YP_004294638.1 325982236 10298119 1537714..1539354 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; KEGG: har:HEAR3085 hypothetical protein; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; diguanylate cyclase/phosphodiesterase 1539354 10298119 NAL212_1597 Nitrosomonas sp. AL212 diguanylate cyclase/phosphodiesterase YP_004294638.1 1537714 D 153948 CDS YP_004294639.1 325982237 10298120 1539573..1540049 1 NC_015222.1 KEGG: neu:NE0832 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily; phenylacetic acid degradation-like protein 1540049 10298120 NAL212_1598 Nitrosomonas sp. AL212 phenylacetic acid degradation-like protein YP_004294639.1 1539573 D 153948 CDS YP_004294640.1 325982238 10298121 complement(1540132..1540593) 1 NC_015222.1 KEGG: nmu:Nmul_A2623 hypothetical protein; hypothetical protein 1540593 10298121 NAL212_1599 Nitrosomonas sp. AL212 hypothetical protein YP_004294640.1 1540132 R 153948 CDS YP_004294641.1 325982239 10298122 1541001..1542371 1 NC_015222.1 PFAM: Protein of unknown function DUF3422; KEGG: neu:NE1887 hypothetical protein; hypothetical protein 1542371 10298122 NAL212_1600 Nitrosomonas sp. AL212 hypothetical protein YP_004294641.1 1541001 D 153948 CDS YP_004294642.1 325982240 10298124 complement(1543434..1544813) 1 NC_015222.1 TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form; KEGG: net:Neut_1760 L-serine dehydratase 1; PFAM: Serine dehydratase-like, alpha subunit; Serine dehydratase beta chain; L-serine dehydratase 1 1544813 10298124 NAL212_1602 Nitrosomonas sp. AL212 L-serine dehydratase 1 YP_004294642.1 1543434 R 153948 CDS YP_004294643.1 325982241 10298125 1545125..1545364 1 NC_015222.1 PFAM: BFD-like [2Fe-2S]-binding domain; KEGG: net:Neut_1196 BFD/(2Fe-2S)-binding domain-containing protein; BFD (2Fe-2S)-binding domain-containing protein 1545364 10298125 NAL212_1603 Nitrosomonas sp. AL212 BFD (2Fe-2S)-binding domain-containing protein YP_004294643.1 1545125 D 153948 CDS YP_004294644.1 325982242 10298126 1545489..1547882 1 NC_015222.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; KEGG: nmu:Nmul_A1260 TonB-dependent siderophore receptor; SMART: Secretin/TonB, short N-terminal; TonB-dependent siderophore receptor 1547882 10298126 NAL212_1604 Nitrosomonas sp. AL212 TonB-dependent siderophore receptor YP_004294644.1 1545489 D 153948 CDS YP_004294645.1 325982243 10298127 1547998..1550253 1 NC_015222.1 KEGG: gwc:GWCH70_2618 hypothetical protein; hypothetical protein 1550253 10298127 NAL212_1605 Nitrosomonas sp. AL212 hypothetical protein YP_004294645.1 1547998 D 153948 CDS YP_004294646.1 325982244 10298128 complement(1550320..1551270) 1 NC_015222.1 PFAM: HhH-GPD domain; KEGG: eba:ebA7191 DNA-3-methyladenine glycosidase II; HhH-GPD family protein 1551270 10298128 NAL212_1606 Nitrosomonas sp. AL212 HhH-GPD family protein YP_004294646.1 1550320 R 153948 CDS YP_004294647.1 325982245 10298129 complement(1551267..1551800) 1 NC_015222.1 KEGG: pfl:PFL_3409 ADA regulatory protein; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; methylated-DNA--protein-cysteine methyltransferase 1551800 10298129 NAL212_1607 Nitrosomonas sp. AL212 methylated-DNA--protein-cysteine methyltransferase YP_004294647.1 1551267 R 153948 CDS YP_004294648.1 325982246 10298130 complement(1552002..1552895) 1 NC_015222.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rma:Rmag_0986 LysR family transcriptional regulator; LysR family transcriptional regulator 1552895 10298130 NAL212_1608 Nitrosomonas sp. AL212 LysR family transcriptional regulator YP_004294648.1 1552002 R 153948 CDS YP_004294649.1 325982247 10298131 1552979..1555297 1 NC_015222.1 TIGRFAM: Cobalamin-independent methionine synthase; KEGG: hch:HCH_01174 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 1555297 10298131 NAL212_1609 Nitrosomonas sp. AL212 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase YP_004294649.1 1552979 D 153948 CDS YP_004294650.1 325982248 10298132 1555368..1556111 1 NC_015222.1 PFAM: TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C; KEGG: net:Neut_1553 TenA/THI-4 domain-containing protein; TENA/THI-4 domain-containing protein 1556111 10298132 NAL212_1610 Nitrosomonas sp. AL212 TENA/THI-4 domain-containing protein YP_004294650.1 1555368 D 153948 CDS YP_004294651.1 325982249 10298133 1556469..1557704 1 NC_015222.1 KEGG: nmu:Nmul_A1552 aminotransferase AlaT; PFAM: Aminotransferase, class I/classII; aspartate transaminase 1557704 10298133 NAL212_1611 Nitrosomonas sp. AL212 aspartate transaminase YP_004294651.1 1556469 D 153948 CDS YP_004294652.1 325982250 10298134 1557785..1559098 1 NC_015222.1 KEGG: nmu:Nmul_A1551 homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT; Homoserine dehydrogenase 1559098 10298134 NAL212_1612 Nitrosomonas sp. AL212 Homoserine dehydrogenase YP_004294652.1 1557785 D 153948 CDS YP_004294653.1 325982251 10298135 1559186..1560604 1 NC_015222.1 TIGRFAM: Threonine synthase; KEGG: neu:NE2370 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; threonine synthase 1560604 10298135 NAL212_1613 Nitrosomonas sp. AL212 threonine synthase YP_004294653.1 1559186 D 153948 CDS YP_004294654.1 325982252 10298136 1560964..1562052 1 NC_015222.1 PFAM: aminopeptidase; KEGG: app:CAP2UW1_1931 aminopeptidase; aminopeptidase 1562052 10298136 NAL212_1614 Nitrosomonas sp. AL212 aminopeptidase YP_004294654.1 1560964 D 153948 CDS YP_004294655.1 325982253 10298137 complement(1562136..1562966) 1 NC_015222.1 TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: nmu:Nmul_A1855 pseudouridine synthase, Rsu; SMART: RNA-binding S4; pseudouridine synthase Rsu 1562966 10298137 NAL212_1615 Nitrosomonas sp. AL212 pseudouridine synthase Rsu YP_004294655.1 1562136 R 153948 CDS YP_004294656.1 325982254 10298138 complement(1563158..1568572) 1 NC_015222.1 PFAM: Haemolysin-type calcium-binding repeat; KEGG: mei:Msip34_1985 putative rhizobiocin/RTX toxin and hemolysin-type calcium binding protein; hemolysin-type calcium-binding protein 1568572 10298138 NAL212_1616 Nitrosomonas sp. AL212 hemolysin-type calcium-binding protein YP_004294656.1 1563158 R 153948 CDS YP_004294657.1 325982255 10298139 complement(1568708..1569034) 1 NC_015222.1 TIGRFAM: Uncharacterised protein family UPF0133; HAMAP: Uncharacterised protein family UPF0133; KEGG: nmu:Nmul_A1857 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; hypothetical protein 1569034 10298139 NAL212_1617 Nitrosomonas sp. AL212 hypothetical protein YP_004294657.1 1568708 R 153948 CDS YP_004294658.1 325982256 10298140 complement(1569021..1570634) 1 NC_015222.1 TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: ATPase, AAA-type, core; KEGG: nmu:Nmul_A1858 DNA-directed DNA polymerase; SMART: ATPase, AAA+ type, core; DNA polymerase III subunits gamma and tau 1570634 10298140 NAL212_1618 Nitrosomonas sp. AL212 DNA polymerase III subunits gamma and tau YP_004294658.1 1569021 R 153948 CDS YP_004294659.1 325982257 10298142 1571061..1572530 1 NC_015222.1 TIGRFAM: RecB family nuclease, TM0106, putative; KEGG: cyc:PCC7424_0336 hypothetical protein; RecB family nuclease 1572530 10298142 NAL212_1619 Nitrosomonas sp. AL212 RecB family nuclease YP_004294659.1 1571061 D 153948 CDS YP_004294660.1 325982258 10298143 complement(1572556..1574010) 1 NC_015222.1 TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: tbd:Tbd_1239 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase, type II, C-terminal; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1574010 10298143 NAL212_1620 Nitrosomonas sp. AL212 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_004294660.1 1572556 R 153948 CDS YP_004294661.1 325982259 10298144 1574401..1575459 1 NC_015222.1 TIGRFAM: DHAP synthase, class 1; KEGG: neu:NE0831 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 1575459 10298144 NAL212_1621 Nitrosomonas sp. AL212 phospho-2-dehydro-3-deoxyheptonate aldolase YP_004294661.1 1574401 D 153948 CDS YP_004294662.1 325982260 10298145 1575720..1576337 1 NC_015222.1 KEGG: nmu:Nmul_A0262 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif putative anchor domain-containing protein 1576337 10298145 NAL212_1622 Nitrosomonas sp. AL212 PEP motif putative anchor domain-containing protein YP_004294662.1 1575720 D 153948 CDS YP_004294663.1 325982261 10298146 1576546..1577421 1 NC_015222.1 KEGG: pgu:PGUG_03259 hypothetical protein; hypothetical protein 1577421 10298146 NAL212_1623 Nitrosomonas sp. AL212 hypothetical protein YP_004294663.1 1576546 D 153948 CDS YP_004294664.1 325982262 10298147 1577798..1578502 1 NC_015222.1 PFAM: Major intrinsic protein; KEGG: bte:BTH_I0598 glycerol uptake facilitator protein; major intrinsic protein 1578502 10298147 NAL212_1624 Nitrosomonas sp. AL212 major intrinsic protein YP_004294664.1 1577798 D 153948 CDS YP_004294665.1 325982263 10298148 complement(1578595..1578828) 1 NC_015222.1 KEGG: osa:9268454 Os01g0516800; hypothetical protein 1578828 10298148 NAL212_1625 Nitrosomonas sp. AL212 hypothetical protein YP_004294665.1 1578595 R 153948 CDS YP_004294666.1 325982264 10298149 1579095..1579937 1 NC_015222.1 PFAM: LysR, substrate-binding; KEGG: noc:Noc_0584 extracellular solute-binding protein; LysR family transcriptional regulator 1579937 10298149 NAL212_1626 Nitrosomonas sp. AL212 LysR family transcriptional regulator YP_004294666.1 1579095 D 153948 CDS YP_004294667.1 325982265 10298150 1579891..1580769 1 NC_015222.1 KEGG: nhl:Nhal_2980 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: Phosphate ABC transporter, permease protein PstC; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 1580769 10298150 NAL212_1627 Nitrosomonas sp. AL212 phosphate ABC transporter permease YP_004294667.1 1579891 D 153948 CDS YP_004294668.1 325982266 10298151 1580762..1581628 1 NC_015222.1 KEGG: nhl:Nhal_2979 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 1581628 10298151 NAL212_1628 Nitrosomonas sp. AL212 phosphate ABC transporter permease YP_004294668.1 1580762 D 153948 CDS YP_004294669.1 325982267 10298152 1581625..1582473 1 NC_015222.1 PFAM: ABC transporter-like; KEGG: noc:Noc_0581 ABC transporter, ATPase subunit; SMART: ATPase, AAA+ type, core; phosphate-transporting ATPase 1582473 10298152 NAL212_1629 Nitrosomonas sp. AL212 phosphate-transporting ATPase YP_004294669.1 1581625 D 153948 CDS YP_004294670.1 325982268 10298153 1582518..1584653 1 NC_015222.1 KEGG: lch:Lcho_1709 SNARE associated Golgi protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SNARE associated Golgi protein; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoyl dehydrogenase 1584653 10298153 NAL212_1630 Nitrosomonas sp. AL212 dihydrolipoyl dehydrogenase YP_004294670.1 1582518 D 153948 CDS YP_004294671.1 325982269 10298157 complement(1586213..1586386) 1 NC_015222.1 KEGG: eel:EUBELI_00813 hypothetical protein; hypothetical protein 1586386 10298157 NAL212_1634 Nitrosomonas sp. AL212 hypothetical protein YP_004294671.1 1586213 R 153948 CDS YP_004294672.1 325982270 10298158 complement(1586520..1586708) 1 NC_015222.1 hypothetical protein 1586708 10298158 NAL212_1635 Nitrosomonas sp. AL212 hypothetical protein YP_004294672.1 1586520 R 153948 CDS YP_004294673.1 325982271 10298159 complement(1586735..1586923) 1 NC_015222.1 KEGG: spb:M28_Spy1325 putative cell surface protein; putative cell surface protein 1586923 10298159 NAL212_1636 Nitrosomonas sp. AL212 putative cell surface protein YP_004294673.1 1586735 R 153948 CDS YP_004294674.1 325982272 10298160 complement(1587113..1587802) 1 NC_015222.1 manually curated; KEGG: nmu:Nmul_A1413 hypothetical protein; hypothetical protein 1587802 10298160 NAL212_1637 Nitrosomonas sp. AL212 hypothetical protein YP_004294674.1 1587113 R 153948 CDS YP_004294675.1 325982273 10298162 1588982..1589302 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1589302 10298162 NAL212_1639 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004294675.1 1588982 D 153948 CDS YP_004294676.1 325982274 10298163 1589302..1590201 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit; integrase catalytic region 1590201 10298163 NAL212_1640 Nitrosomonas sp. AL212 integrase catalytic region YP_004294676.1 1589302 D 153948 CDS YP_004294677.1 325982275 10298164 complement(1590385..1591884) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: mms:mma_2809 transposase IstA; integrase catalytic region 1591884 10298164 NAL212_1641 Nitrosomonas sp. AL212 integrase catalytic region YP_004294677.1 1590385 R 153948 CDS YP_004294678.1 325982276 10298165 complement(1592167..1592433) 1 NC_015222.1 KEGG: edi:EDI_123220 hypothetical protein; hypothetical protein 1592433 10298165 NAL212_1642 Nitrosomonas sp. AL212 hypothetical protein YP_004294678.1 1592167 R 153948 CDS YP_004294679.1 325982277 10298166 complement(1592442..1592987) 1 NC_015222.1 KEGG: sbl:Sbal_0637 hypothetical protein; hypothetical protein 1592987 10298166 NAL212_1643 Nitrosomonas sp. AL212 hypothetical protein YP_004294679.1 1592442 R 153948 CDS YP_004294680.1 325982278 10298167 1593286..1593906 1 NC_015222.1 KEGG: mhu:Mhun_2063 hypothetical protein; hypothetical protein 1593906 10298167 NAL212_1644 Nitrosomonas sp. AL212 hypothetical protein YP_004294680.1 1593286 D 153948 CDS YP_004294681.1 325982279 10298168 complement(1593923..1594897) 1 NC_015222.1 PFAM: Zonular occludens toxin; KEGG: neu:NE0893 hypothetical protein; Zonular occludens toxin 1594897 10298168 NAL212_1645 Nitrosomonas sp. AL212 Zonular occludens toxin YP_004294681.1 1593923 R 153948 CDS YP_004294682.1 325982280 10298169 complement(1594894..1595187) 1 NC_015222.1 PFAM: Protein of unknown function DUF2523; KEGG: neu:NE0892 putative phage gene; hypothetical protein 1595187 10298169 NAL212_1646 Nitrosomonas sp. AL212 hypothetical protein YP_004294682.1 1594894 R 153948 CDS YP_004294683.1 325982281 10298170 complement(1595187..1596506) 1 NC_015222.1 KEGG: neu:NE0891 hypothetical protein; hypothetical protein 1596506 10298170 NAL212_1647 Nitrosomonas sp. AL212 hypothetical protein YP_004294683.1 1595187 R 153948 CDS YP_004294684.1 325982282 10298171 complement(1596559..1596873) 1 NC_015222.1 KEGG: aav:Aave_2001 YccS/YhfK family integral membrane protein; hypothetical protein 1596873 10298171 NAL212_1648 Nitrosomonas sp. AL212 hypothetical protein YP_004294684.1 1596559 R 153948 CDS YP_004294685.1 325982283 10298172 complement(1596927..1597268) 1 NC_015222.1 PFAM: Coat protein B, bacteriophage; KEGG: neu:NE0890 hypothetical protein; Coat protein B 1597268 10298172 NAL212_1649 Nitrosomonas sp. AL212 Coat protein B YP_004294685.1 1596927 R 153948 CDS YP_004294686.1 325982284 10298173 complement(1597341..1598360) 1 NC_015222.1 KEGG: neu:NE0888 hypothetical protein; TIGRFAM: Phage/plasmid replication protein, gene II/X; PFAM: Phage/plasmid replication protein, gene II/X, C-terminal; phage/plasmid replication protein, II/X family 1598360 10298173 NAL212_1650 Nitrosomonas sp. AL212 phage/plasmid replication protein, II/X family YP_004294686.1 1597341 R 153948 CDS YP_004294687.1 325982285 10298174 complement(1598439..1598753) 1 NC_015222.1 KEGG: asa:ASA_2021 hypothetical protein; hypothetical protein 1598753 10298174 NAL212_1651 Nitrosomonas sp. AL212 hypothetical protein YP_004294687.1 1598439 R 153948 CDS YP_004294688.1 325982286 10298175 1599103..1599468 1 NC_015222.1 KEGG: neu:NE0886 hypothetical protein; hypothetical protein 1599468 10298175 NAL212_1652 Nitrosomonas sp. AL212 hypothetical protein YP_004294688.1 1599103 D 153948 CDS YP_004294689.1 325982287 10298176 1599684..1600112 1 NC_015222.1 KEGG: neu:NE0894 hypothetical protein; hypothetical protein 1600112 10298176 NAL212_1653 Nitrosomonas sp. AL212 hypothetical protein YP_004294689.1 1599684 D 153948 CDS YP_004294690.1 325982288 10298177 complement(1600146..1602068) 1 NC_015222.1 KEGG: sfu:Sfum_1900 hypothetical protein; hypothetical protein 1602068 10298177 NAL212_1654 Nitrosomonas sp. AL212 hypothetical protein YP_004294690.1 1600146 R 153948 CDS YP_004294691.1 325982289 10298178 complement(1602273..1602539) 1 NC_015222.1 KEGG: kse:Ksed_06350 hypothetical protein; hypothetical protein 1602539 10298178 NAL212_1655 Nitrosomonas sp. AL212 hypothetical protein YP_004294691.1 1602273 R 153948 CDS YP_004294692.1 325982290 10298179 complement(1602660..1603625) 1 NC_015222.1 PFAM: Zonular occludens toxin; KEGG: neu:NE0893 hypothetical protein; Zonular occludens toxin 1603625 10298179 NAL212_1656 Nitrosomonas sp. AL212 Zonular occludens toxin YP_004294692.1 1602660 R 153948 CDS YP_004294693.1 325982291 10298180 complement(1603622..1603915) 1 NC_015222.1 PFAM: Protein of unknown function DUF2523; KEGG: neu:NE0892 putative phage gene; hypothetical protein 1603915 10298180 NAL212_1657 Nitrosomonas sp. AL212 hypothetical protein YP_004294693.1 1603622 R 153948 CDS YP_004294694.1 325982292 10298181 complement(1603915..1605234) 1 NC_015222.1 KEGG: neu:NE0891 hypothetical protein; hypothetical protein 1605234 10298181 NAL212_1658 Nitrosomonas sp. AL212 hypothetical protein YP_004294694.1 1603915 R 153948 CDS YP_004294695.1 325982293 10298182 complement(1605287..1605598) 1 NC_015222.1 KEGG: bja:blr5446 hypothetical protein; hypothetical protein 1605598 10298182 NAL212_1659 Nitrosomonas sp. AL212 hypothetical protein YP_004294695.1 1605287 R 153948 CDS YP_004294696.1 325982294 10298183 complement(1605649..1605885) 1 NC_015222.1 PFAM: Coat protein B, bacteriophage; KEGG: neu:NE0890 hypothetical protein; Coat protein B 1605885 10298183 NAL212_1660 Nitrosomonas sp. AL212 Coat protein B YP_004294696.1 1605649 R 153948 CDS YP_004294697.1 325982295 10298184 complement(1605962..1606258) 1 NC_015222.1 KEGG: neu:NE0889 hypothetical protein; hypothetical protein 1606258 10298184 NAL212_1661 Nitrosomonas sp. AL212 hypothetical protein YP_004294697.1 1605962 R 153948 CDS YP_004294698.1 325982296 10298185 complement(1606334..1607344) 1 NC_015222.1 PFAM: Phage/plasmid replication protein, gene II/X, C-terminal; Phage/plasmid replication protein, gene II/X, N-terminal; KEGG: neu:NE0888 hypothetical protein; phage/plasmid replication protein, II/X, C-terminal protein 1607344 10298185 NAL212_1662 Nitrosomonas sp. AL212 phage/plasmid replication protein, II/X, C-terminal protein YP_004294698.1 1606334 R 153948 CDS YP_004294699.1 325982297 10298186 complement(1607358..1607627) 1 NC_015222.1 KEGG: tet:TTHERM_00370830 Guanylate-binding protein, N-terminal domain containing protein; hypothetical protein 1607627 10298186 NAL212_1663 Nitrosomonas sp. AL212 hypothetical protein YP_004294699.1 1607358 R 153948 CDS YP_004294700.1 325982298 10298187 1607757..1608116 1 NC_015222.1 KEGG: neu:NE0886 hypothetical protein; hypothetical protein 1608116 10298187 NAL212_1664 Nitrosomonas sp. AL212 hypothetical protein YP_004294700.1 1607757 D 153948 CDS YP_004294701.1 325982299 10298188 1608367..1608795 1 NC_015222.1 KEGG: neu:NE0894 hypothetical protein; hypothetical protein 1608795 10298188 NAL212_1665 Nitrosomonas sp. AL212 hypothetical protein YP_004294701.1 1608367 D 153948 CDS YP_004294702.1 325982300 10298189 complement(1609077..1611380) 1 NC_015222.1 KEGG: mms:mma_2809 transposase IstA; PFAM: IstB-like ATP-binding protein; Integrase, catalytic core; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 1611380 10298189 NAL212_1666 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004294702.1 1609077 R 153948 CDS YP_004294703.1 325982301 10298190 complement(1611627..1612124) 1 NC_015222.1 PFAM: NLP/P60; KEGG: neu:NE2364 NLP/P60; NLP/P60 protein 1612124 10298190 NAL212_1667 Nitrosomonas sp. AL212 NLP/P60 protein YP_004294703.1 1611627 R 153948 CDS YP_004294704.1 325982302 10298191 complement(1612189..1613268) 1 NC_015222.1 PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; Signal transduction response regulator, receiver domain; KEGG: net:Neut_1173 chemotaxis-specific methylesterase; SMART: Signal transduction response regulator, receiver domain; response regulator receiver modulated CheB methylesterase 1613268 10298191 NAL212_1668 Nitrosomonas sp. AL212 response regulator receiver modulated CheB methylesterase YP_004294704.1 1612189 R 153948 CDS YP_004294705.1 325982303 10298192 complement(1613305..1613916) 1 NC_015222.1 KEGG: tbd:Tbd_1616 chemoreceptor glutamine deamidase CheD; PFAM: Chemoreceptor glutamine deamidase CheD; protein CheD 1613916 10298192 NAL212_1669 Nitrosomonas sp. AL212 protein CheD YP_004294705.1 1613305 R 153948 CDS YP_004294706.1 325982304 10298193 complement(1613924..1614787) 1 NC_015222.1 PFAM: MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal; MCP methyltransferase, CheR-type, all-alpha domain, N-terminal; KEGG: neu:NE1861 CheR-type MCP methyl-transferase:generic methyl-transferase; SMART: MCP methyltransferase, CheR-type; CheR-type MCP methyltransferase 1614787 10298193 NAL212_1670 Nitrosomonas sp. AL212 CheR-type MCP methyltransferase YP_004294706.1 1613924 R 153948 CDS YP_004294707.1 325982305 10298194 complement(1615006..1617192) 1 NC_015222.1 KEGG: neu:NE1866 chemotaxis sensor histidine kinase transcription regulator protein; PFAM: CheW-like protein; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; Signal transduction histidine kinase, subgroup, homodimeric; SMART: CheW-like protein; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; ATPase-like, ATP-binding domain; CheA signal transduction histidine kinase 1617192 10298194 NAL212_1671 Nitrosomonas sp. AL212 CheA signal transduction histidine kinase YP_004294707.1 1615006 R 153948 CDS YP_004294708.1 325982306 10298195 complement(1617326..1617691) 1 NC_015222.1 KEGG: dar:Daro_0725 response regulator receiver; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; response regulator receiver protein 1617691 10298195 NAL212_1672 Nitrosomonas sp. AL212 response regulator receiver protein YP_004294708.1 1617326 R 153948 CDS YP_004294709.1 325982307 10298196 complement(1617753..1618415) 1 NC_015222.1 KEGG: mfa:Mfla_1938 hypothetical protein; hypothetical protein 1618415 10298196 NAL212_1673 Nitrosomonas sp. AL212 hypothetical protein YP_004294709.1 1617753 R 153948 CDS YP_004294710.1 325982308 10298197 complement(1618370..1618519) 1 NC_015222.1 hypothetical protein 1618519 10298197 NAL212_1674 Nitrosomonas sp. AL212 hypothetical protein YP_004294710.1 1618370 R 153948 CDS YP_004294711.1 325982309 10298198 complement(1618718..1619956) 1 NC_015222.1 KEGG: net:Neut_2126 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; Metal-dependent hydrolase HDOD; SMART: Diguanylate phosphodiesterase, EAL domain; diguanylate phosphodiesterase metal dependent hydrolase domain 1619956 10298198 NAL212_1675 Nitrosomonas sp. AL212 diguanylate phosphodiesterase metal dependent hydrolase domain YP_004294711.1 1618718 R 153948 CDS YP_004294712.1 325982310 10298199 complement(1620105..1620905) 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: net:Neut_2127 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 1620905 10298199 NAL212_1676 Nitrosomonas sp. AL212 diguanylate cyclase YP_004294712.1 1620105 R 153948 CDS YP_004294713.1 325982311 10298200 complement(1621235..1621888) 1 NC_015222.1 KEGG: nmr:Nmar_1252 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen 1621888 10298200 NAL212_1677 Nitrosomonas sp. AL212 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004294713.1 1621235 R 153948 CDS YP_004294714.1 325982312 10298201 1621992..1622447 1 NC_015222.1 PFAM: Protein of unknown function DUF55; KEGG: nmu:Nmul_A0614 hypothetical protein; hypothetical protein 1622447 10298201 NAL212_1678 Nitrosomonas sp. AL212 hypothetical protein YP_004294714.1 1621992 D 153948 CDS YP_004294715.1 325982313 10298202 1622479..1623276 1 NC_015222.1 PFAM: Protein of unknown function DUF81; KEGG: nmu:Nmul_A0613 hypothetical protein; hypothetical protein 1623276 10298202 NAL212_1679 Nitrosomonas sp. AL212 hypothetical protein YP_004294715.1 1622479 D 153948 CDS YP_004294716.1 325982314 10298203 complement(1623461..1623994) 1 NC_015222.1 KEGG: eli:ELI_14255 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; inorganic diphosphatase 1623994 10298203 NAL212_1680 Nitrosomonas sp. AL212 inorganic diphosphatase YP_004294716.1 1623461 R 153948 CDS YP_004294717.1 325982315 10298204 complement(1624355..1625188) 1 NC_015222.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: tbd:Tbd_0244 outer membrane protein; OmpA/MotB domain-containing protein 1625188 10298204 NAL212_1681 Nitrosomonas sp. AL212 OmpA/MotB domain-containing protein YP_004294717.1 1624355 R 153948 CDS YP_004294718.1 325982316 10298205 complement(1625207..1625614) 1 NC_015222.1 KEGG: tbd:Tbd_0243 hypothetical protein; hypothetical protein 1625614 10298205 NAL212_1682 Nitrosomonas sp. AL212 hypothetical protein YP_004294718.1 1625207 R 153948 CDS YP_004294719.1 325982317 10298207 complement(1626304..1626702) 1 NC_015222.1 KEGG: tgu:100229040 similar to lysophosphatidic acid receptor 2; lysophosphatidic acid receptor 2-like protein 1626702 10298207 NAL212_1684 Nitrosomonas sp. AL212 lysophosphatidic acid receptor 2-like protein YP_004294719.1 1626304 R 153948 CDS YP_004294720.1 325982318 10298208 1627056..1627655 1 NC_015222.1 KEGG: nmu:Nmul_A0989 hypothetical protein; hypothetical protein 1627655 10298208 NAL212_1685 Nitrosomonas sp. AL212 hypothetical protein YP_004294720.1 1627056 D 153948 CDS YP_004294721.1 325982319 10298209 1627792..1629306 1 NC_015222.1 KEGG: nmu:Nmul_A0988 putative ubiquinone biosynthesis protein UbiB; TIGRFAM: Probable ubiquinone biosynthesis protein UbiB; PFAM: ABC-1; 2-polyprenylphenol 6-hydroxylase 1629306 10298209 NAL212_1686 Nitrosomonas sp. AL212 2-polyprenylphenol 6-hydroxylase YP_004294721.1 1627792 D 153948 CDS YP_004294722.1 325982320 10298210 1629466..1629774 1 NC_015222.1 KEGG: nmu:Nmul_A0978 putative ferredoxin 2fe-2s protein; putative ferredoxin 2fe-2s protein 1629774 10298210 NAL212_1687 Nitrosomonas sp. AL212 putative ferredoxin 2fe-2s protein YP_004294722.1 1629466 D 153948 CDS YP_004294723.1 325982321 10298211 1629838..1630023 1 NC_015222.1 KEGG: dgr:Dgri_GH10779 GH10779 gene product from transcript GH10779-RA; hypothetical protein 1630023 10298211 NAL212_1688 Nitrosomonas sp. AL212 hypothetical protein YP_004294723.1 1629838 D 153948 CDS YP_004294724.1 325982322 10298212 complement(1630006..1631265) 1 NC_015222.1 TIGRFAM: Transcription termination factor Rho; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, N-terminal; Rho termination factor, RNA-binding; KEGG: neu:NE1035 transcription termination factor Rho; SMART: Cold shock protein; ATPase, AAA+ type, core; Rho termination factor, N-terminal; transcription termination factor Rho 1631265 10298212 NAL212_1689 Nitrosomonas sp. AL212 transcription termination factor Rho YP_004294724.1 1630006 R 153948 CDS YP_004294725.1 325982323 10298213 complement(1631410..1631736) 1 NC_015222.1 KEGG: nmu:Nmul_A2084 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin 1631736 10298213 NAL212_1690 Nitrosomonas sp. AL212 thioredoxin YP_004294725.1 1631410 R 153948 CDS YP_004294726.1 325982324 10298214 complement(1631971..1633026) 1 NC_015222.1 PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: nmu:Nmul_A0730 ABC transporter related; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase 1633026 10298214 NAL212_1691 Nitrosomonas sp. AL212 Fe(3+)-transporting ATPase YP_004294726.1 1631971 R 153948 CDS YP_004294727.1 325982325 10298215 complement(1633030..1634631) 1 NC_015222.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: nmu:Nmul_A0731 binding-protein dependent transport system inner membrane protein; ABC transporter permease 1634631 10298215 NAL212_1692 Nitrosomonas sp. AL212 ABC transporter permease YP_004294727.1 1633030 R 153948 CDS YP_004294728.1 325982326 10298216 complement(1634732..1635745) 1 NC_015222.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: nmu:Nmul_A0732 extracellular solute-binding protein; extracellular solute-binding protein 1635745 10298216 NAL212_1693 Nitrosomonas sp. AL212 extracellular solute-binding protein YP_004294728.1 1634732 R 153948 CDS YP_004294729.1 325982327 10298217 complement(1635862..1636584) 1 NC_015222.1 PFAM: Protein of unknown function DUF3750; KEGG: neu:NE1937 hypothetical protein; hypothetical protein 1636584 10298217 NAL212_1694 Nitrosomonas sp. AL212 hypothetical protein YP_004294729.1 1635862 R 153948 CDS YP_004294730.1 325982328 10298218 complement(1636722..1637672) 1 NC_015222.1 KEGG: pfo:Pfl01_3049 hypothetical protein; hypothetical protein 1637672 10298218 NAL212_1695 Nitrosomonas sp. AL212 hypothetical protein YP_004294730.1 1636722 R 153948 CDS YP_004294731.1 325982329 10298219 complement(1637896..1639449) 1 NC_015222.1 PFAM: GTP-binding protein, HSR1-related; KEGG: alv:Alvin_1744 GTP-binding protein HSR1-related protein; GTP-binding protein HSR1-like protein 1639449 10298219 NAL212_1696 Nitrosomonas sp. AL212 GTP-binding protein HSR1-like protein YP_004294731.1 1637896 R 153948 CDS YP_004294732.1 325982330 10298220 complement(1639446..1640675) 1 NC_015222.1 PFAM: Protein of unknown function DUF697; KEGG: alv:Alvin_1745 hypothetical protein; hypothetical protein 1640675 10298220 NAL212_1697 Nitrosomonas sp. AL212 hypothetical protein YP_004294732.1 1639446 R 153948 CDS YP_004294733.1 325982331 10298221 1640925..1641650 1 NC_015222.1 PFAM: Phage tail collar; KEGG: shw:Sputw3181_3688 phage tail collar domain-containing protein; Tail Collar domain-containing protein 1641650 10298221 NAL212_1698 Nitrosomonas sp. AL212 Tail Collar domain-containing protein YP_004294733.1 1640925 D 153948 CDS YP_004294734.1 325982332 10298222 1641692..1642663 1 NC_015222.1 SMART: Sel1-like; KEGG: hse:Hsero_0999 SEL1 subfamily TPR repeatcontaining protein; Sel1 domain-containing protein repeat-containing protein 1642663 10298222 NAL212_1699 Nitrosomonas sp. AL212 Sel1 domain-containing protein repeat-containing protein YP_004294734.1 1641692 D 153948 CDS YP_004294735.1 325982333 10298223 1642784..1648810 1 NC_015222.1 KEGG: spc:Sputcn32_3550 fibronectin, type III domain-containing protein; hypothetical protein 1648810 10298223 NAL212_1700 Nitrosomonas sp. AL212 hypothetical protein YP_004294735.1 1642784 D 153948 CDS YP_004294736.1 325982334 10298224 complement(1648936..1650609) 1 NC_015222.1 PFAM: Glycosyl transferase, family 4; KEGG: geo:Geob_2139 phospho-N-acetylmuramoyl-pentapeptide-transferase; glycosyl transferase family protein 1650609 10298224 NAL212_1701 Nitrosomonas sp. AL212 glycosyl transferase family protein YP_004294736.1 1648936 R 153948 CDS YP_004294737.1 325982335 10298225 complement(1650622..1651491) 1 NC_015222.1 PFAM: Domain of unknown function DUF3473; Polysaccharide deacetylase; KEGG: cph:Cpha266_2617 polysaccharide deacetylase; hypothetical protein 1651491 10298225 NAL212_1702 Nitrosomonas sp. AL212 hypothetical protein YP_004294737.1 1650622 R 153948 CDS YP_004294738.1 325982336 10298226 complement(1651874..1653178) 1 NC_015222.1 PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: sde:Sde_0801 glycerophosphoryl diester phosphodiesterase family protein; glycerophosphoryl diester phosphodiesterase 1653178 10298226 NAL212_1703 Nitrosomonas sp. AL212 glycerophosphoryl diester phosphodiesterase YP_004294738.1 1651874 R 153948 CDS YP_004294739.1 325982337 10298227 complement(1653846..1654802) 1 NC_015222.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: rva:Rvan_0114 alpha/beta hydrolase fold protein; alpha/beta hydrolase fold protein 1654802 10298227 NAL212_1704 Nitrosomonas sp. AL212 alpha/beta hydrolase fold protein YP_004294739.1 1653846 R 153948 CDS YP_004294740.1 325982338 10298228 complement(1654802..1655194) 1 NC_015222.1 KEGG: smc:SmuNN2025_0192 putative histidine kinase; hypothetical protein 1655194 10298228 NAL212_1705 Nitrosomonas sp. AL212 hypothetical protein YP_004294740.1 1654802 R 153948 CDS YP_004294741.1 325982339 10298229 complement(1655207..1655437) 1 NC_015222.1 KEGG: bac:BamMC406_5908 polysaccharide biosynthesis protein; hypothetical protein 1655437 10298229 NAL212_1706 Nitrosomonas sp. AL212 hypothetical protein YP_004294741.1 1655207 R 153948 CDS YP_004294742.1 325982340 10298230 1655479..1657674 1 NC_015222.1 PFAM: Putative RNA methylase; S-adenosylmethionine-dependent methyltransferase; THUMP; KEGG: mca:MCA0712 23S rRNA m(2)G2445 methyltransferase; SMART: THUMP; rRNA (guanine-N(2)-)-methyltransferase 1657674 10298230 NAL212_1707 Nitrosomonas sp. AL212 rRNA (guanine-N(2)-)-methyltransferase YP_004294742.1 1655479 D 153948 CDS YP_004294743.1 325982341 10298231 1657784..1658569 1 NC_015222.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: slt:Slit_0391 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1658569 10298231 NAL212_1708 Nitrosomonas sp. AL212 short-chain dehydrogenase/reductase SDR YP_004294743.1 1657784 D 153948 CDS YP_004294744.1 325982342 10298232 complement(1658644..1659477) 1 NC_015222.1 PFAM: ABC-3; KEGG: nmu:Nmul_A1230 hypothetical protein; ABC transporter permease 1659477 10298232 NAL212_1709 Nitrosomonas sp. AL212 ABC transporter permease YP_004294744.1 1658644 R 153948 CDS YP_004294745.1 325982343 10298233 complement(1659477..1660295) 1 NC_015222.1 PFAM: ABC transporter-like; KEGG: nmu:Nmul_A1231 ABC transporter related; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 1660295 10298233 NAL212_1710 Nitrosomonas sp. AL212 phosphonate-transporting ATPase YP_004294745.1 1659477 R 153948 CDS YP_004294746.1 325982344 10298234 complement(1660273..1661241) 1 NC_015222.1 PFAM: ABC transporter metal-binding lipoprotein; KEGG: nmu:Nmul_A1232 periplasmic solute binding protein; heavy metal ABC transporter substrate-binding protein 1661241 10298234 NAL212_1711 Nitrosomonas sp. AL212 heavy metal ABC transporter substrate-binding protein YP_004294746.1 1660273 R 153948 CDS YP_004294747.1 325982345 10298235 1661370..1663448 1 NC_015222.1 PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: nmu:Nmul_A1233 TonB-dependent receptor; TonB-dependent receptor plug 1663448 10298235 NAL212_1712 Nitrosomonas sp. AL212 TonB-dependent receptor plug YP_004294747.1 1661370 D 153948 CDS YP_004294748.1 325982346 10298236 1663550..1664011 1 NC_015222.1 PFAM: Transcription factor, NikR, nickel binding C-terminal; CopG-like DNA-binding; KEGG: nmu:Nmul_A1234 nickel responsive regulator; CopG family transcriptional regulator NikR 1664011 10298236 NAL212_1713 Nitrosomonas sp. AL212 CopG family transcriptional regulator NikR YP_004294748.1 1663550 D 153948 CDS YP_004294749.1 325982347 10298237 complement(1664087..1665070) 1 NC_015222.1 KEGG: neu:NE1059 putative UreA transporter; TIGRFAM: Urea transporter, bacteria; PFAM: Urea transporter; urea transporter 1665070 10298237 NAL212_1714 Nitrosomonas sp. AL212 urea transporter YP_004294749.1 1664087 R 153948 CDS YP_004294750.1 325982348 10298238 complement(1665182..1665820) 1 NC_015222.1 TIGRFAM: Urease accessory protein UreG; HAMAP: Urease accessory protein UreG; KEGG: nmu:Nmul_A1244 urease accessory protein UreG; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; urease accessory protein ureG 1665820 10298238 NAL212_1715 Nitrosomonas sp. AL212 urease accessory protein ureG YP_004294750.1 1665182 R 153948 CDS YP_004294751.1 325982349 10298239 complement(1665838..1666515) 1 NC_015222.1 KEGG: nmu:Nmul_A1243 urease accessory protein UreF; HAMAP: Urease accessory protein UreF; PFAM: Urease accessory protein UreF; urease accessory protein ureF 1666515 10298239 NAL212_1716 Nitrosomonas sp. AL212 urease accessory protein ureF YP_004294751.1 1665838 R 153948 CDS YP_004294752.1 325982350 10298240 complement(1666528..1667055) 1 NC_015222.1 PFAM: UreE urease accessory, C-terminal; UreE urease accessory, N-terminal; KEGG: nmu:Nmul_A1242 UreE urease accessory-like; UreE urease accessory domain-containing protein 1667055 10298240 NAL212_1717 Nitrosomonas sp. AL212 UreE urease accessory domain-containing protein YP_004294752.1 1666528 R 153948 CDS YP_004294753.1 325982351 10298241 complement(1667182..1668888) 1 NC_015222.1 TIGRFAM: Urease, alpha subunit; KEGG: nmu:Nmul_A1241 urease subunit alpha; PFAM: Amidohydrolase 1; Urease alpha-subunit, N-terminal; urease subunit alpha 1668888 10298241 NAL212_1718 Nitrosomonas sp. AL212 urease subunit alpha YP_004294753.1 1667182 R 153948 CDS YP_004294754.1 325982352 10298242 complement(1668922..1669242) 1 NC_015222.1 TIGRFAM: Urease, beta subunit; KEGG: nmu:Nmul_A1240 urease, beta subunit; PFAM: Urease, beta subunit; urease subunit beta 1669242 10298242 NAL212_1719 Nitrosomonas sp. AL212 urease subunit beta YP_004294754.1 1668922 R 153948 CDS YP_004294755.1 325982353 10298243 complement(1669268..1669570) 1 NC_015222.1 TIGRFAM: Urease, alpha/gamma subunit; KEGG: nmu:Nmul_A1239 urease, gamma subunit; PFAM: Urease, alpha/gamma subunit; urease subunit gamma 1669570 10298243 NAL212_1720 Nitrosomonas sp. AL212 urease subunit gamma YP_004294755.1 1669268 R 153948 CDS YP_004294756.1 325982354 10298244 complement(1669659..1670606) 1 NC_015222.1 PFAM: Urease accessory protein UreD; KEGG: nmu:Nmul_A1238 urease accessory protein UreD; Urease accessory protein UreD 1670606 10298244 NAL212_1721 Nitrosomonas sp. AL212 Urease accessory protein UreD YP_004294756.1 1669659 R 153948 CDS YP_004294757.1 325982355 10298245 complement(1670652..1671956) 1 NC_015222.1 KEGG: nmu:Nmul_A1237 hypothetical protein; hypothetical protein 1671956 10298245 NAL212_1722 Nitrosomonas sp. AL212 hypothetical protein YP_004294757.1 1670652 R 153948 CDS YP_004294758.1 325982356 10298246 1672715..1673770 1 NC_015222.1 PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: slt:Slit_1450 fructose-bisphosphate aldolase; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 1673770 10298246 NAL212_1723 Nitrosomonas sp. AL212 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_004294758.1 1672715 D 153948 CDS YP_004294759.1 325982357 10298247 complement(1673852..1674529) 1 NC_015222.1 KEGG: nmu:Nmul_A2289 Sel1 repeat-containing protein; PFAM: Sel1-like; SMART: Sel1-like; Sel1 domain-containing protein repeat-containing protein 1674529 10298247 NAL212_1724 Nitrosomonas sp. AL212 Sel1 domain-containing protein repeat-containing protein YP_004294759.1 1673852 R 153948 CDS YP_004294760.1 325982358 10298248 complement(1674613..1675362) 1 NC_015222.1 PFAM: Ankyrin repeat; KEGG: mba:Mbar_A2380 hypothetical protein; ankyrin 1675362 10298248 NAL212_1725 Nitrosomonas sp. AL212 ankyrin YP_004294760.1 1674613 R 153948 CDS YP_004294761.1 325982359 10298249 1675710..1676882 1 NC_015222.1 KEGG: nmu:Nmul_A0130 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Monooxygenase, FAD-binding; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase 1676882 10298249 NAL212_1726 Nitrosomonas sp. AL212 UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase YP_004294761.1 1675710 D 153948 CDS YP_004294762.1 325982360 10298250 1677047..1678054 1 NC_015222.1 KEGG: nmu:Nmul_A0131 dihydrouridine synthase TIM-barrel protein nifR3; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; PFAM: tRNA-dihydrouridine synthase; nifR3 family TIM-barrel protein 1678054 10298250 NAL212_1727 Nitrosomonas sp. AL212 nifR3 family TIM-barrel protein YP_004294762.1 1677047 D 153948 CDS YP_004294763.1 325982361 10298251 1678058..1678300 1 NC_015222.1 PFAM: Helix-turn-helix, Fis-type; KEGG: nmu:Nmul_A0132 fis family transcriptional regulator; Fis family transcriptional regulator 1678300 10298251 NAL212_1728 Nitrosomonas sp. AL212 Fis family transcriptional regulator YP_004294763.1 1678058 D 153948 CDS YP_004294764.1 325982362 10298252 1678297..1679856 1 NC_015222.1 SMART: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; TIGRFAM: AICARFT/IMPCHase bienzyme; KEGG: nmu:Nmul_A0133 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1679856 10298252 NAL212_1729 Nitrosomonas sp. AL212 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_004294764.1 1678297 D 153948 CDS YP_004294765.1 325982363 10298253 1679871..1681187 1 NC_015222.1 TIGRFAM: Phosphoribosylglycinamide synthetase; KEGG: neu:NE0877 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; phosphoribosylamine/glycine ligase 1681187 10298253 NAL212_1730 Nitrosomonas sp. AL212 phosphoribosylamine/glycine ligase YP_004294765.1 1679871 D 153948 CDS YP_004294766.1 325982364 10298255 1681531..1683147 1 NC_015222.1 KEGG: amr:AM1_6172 IS5 family transposase; IS5 family transposase 1683147 10298255 NAL212_1732 Nitrosomonas sp. AL212 IS5 family transposase YP_004294766.1 1681531 D 153948 CDS YP_004294767.1 325982365 10298256 complement(1684189..1686105) 1 NC_015222.1 KEGG: nmu:Nmul_A1330 flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; flagellar hook-associated protein FlgK 1686105 10298256 NAL212_1733 Nitrosomonas sp. AL212 flagellar hook-associated protein FlgK YP_004294767.1 1684189 R 153948 CDS YP_004294768.1 325982366 10298257 complement(1686189..1687184) 1 NC_015222.1 KEGG: net:Neut_0343 flagellar rod assembly protein/muramidase FlgJ; TIGRFAM: Flagellar protein FlgJ type-2; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ, N-terminal; flagellar rod assembly protein/muramidase FlgJ 1687184 10298257 NAL212_1734 Nitrosomonas sp. AL212 flagellar rod assembly protein/muramidase FlgJ YP_004294768.1 1686189 R 153948 CDS YP_004294769.1 325982367 10298258 complement(1687199..1688308) 1 NC_015222.1 PFAM: Flagellar P-ring protein; KEGG: neu:NE0309 flagellar basal body P-ring protein; flagellar P-ring protein 1688308 10298258 NAL212_1735 Nitrosomonas sp. AL212 flagellar P-ring protein YP_004294769.1 1687199 R 153948 CDS YP_004294770.1 325982368 10298259 complement(1688354..1689070) 1 NC_015222.1 PFAM: Flagellar L-ring protein; KEGG: net:Neut_0341 flagellar basal body L-ring protein; flagellar L-ring protein 1689070 10298259 NAL212_1736 Nitrosomonas sp. AL212 flagellar L-ring protein YP_004294770.1 1688354 R 153948 CDS YP_004294771.1 325982369 10298260 complement(1689096..1689878) 1 NC_015222.1 KEGG: nmu:Nmul_A1326 hypothetical protein; TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; flagellar basal-body rod protein FlgG 1689878 10298260 NAL212_1737 Nitrosomonas sp. AL212 flagellar basal-body rod protein FlgG YP_004294771.1 1689096 R 153948 CDS YP_004294772.1 325982370 10298261 complement(1689906..1690649) 1 NC_015222.1 KEGG: neu:NE0306 flagellar basal body rod protein FlgF; TIGRFAM: Flagellar basal-body rod FlgF; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; flagellar basal-body rod protein FlgF 1690649 10298261 NAL212_1738 Nitrosomonas sp. AL212 flagellar basal-body rod protein FlgF YP_004294772.1 1689906 R 153948 CDS YP_004294773.1 325982371 10298262 complement(1690678..1691949) 1 NC_015222.1 KEGG: net:Neut_0338 flagellar hook protein FlgE; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body FlaE; Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; fagellar hook-basal body protein 1691949 10298262 NAL212_1739 Nitrosomonas sp. AL212 fagellar hook-basal body protein YP_004294773.1 1690678 R 153948 CDS YP_004294774.1 325982372 10298263 complement(1691963..1692631) 1 NC_015222.1 PFAM: Flagellar hook capping protein; KEGG: neu:NE0304 flagellar basal body rod modification protein; flagellar hook capping protein 1692631 10298263 NAL212_1740 Nitrosomonas sp. AL212 flagellar hook capping protein YP_004294774.1 1691963 R 153948 CDS YP_004294775.1 325982373 10298264 complement(1692643..1693044) 1 NC_015222.1 manually curated; TIGRFAM: Flagellar basal-body rod protein FlgC; KEGG: net:Neut_0336 flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; flagellar basal-body rod protein FlgC 1693044 10298264 NAL212_1741 Nitrosomonas sp. AL212 flagellar basal-body rod protein FlgC YP_004294775.1 1692643 R 153948 CDS YP_004294776.1 325982374 10298265 complement(1693049..1693942) 1 NC_015222.1 KEGG: ppr:PBPRB1378 hypothetical protein; hypothetical protein 1693942 10298265 NAL212_1742 Nitrosomonas sp. AL212 hypothetical protein YP_004294776.1 1693049 R 153948 CDS YP_004294777.1 325982375 10298266 complement(1694028..1694438) 1 NC_015222.1 KEGG: slt:Slit_0565 flagellar basal-body rod protein FlgB; TIGRFAM: Flagellar basal-body rod protein FlgB; PFAM: Flagellar basal body rod protein, N-terminal; flagellar basal-body rod protein FlgB 1694438 10298266 NAL212_1743 Nitrosomonas sp. AL212 flagellar basal-body rod protein FlgB YP_004294777.1 1694028 R 153948 CDS YP_004294778.1 325982376 10298267 1694637..1695386 1 NC_015222.1 TIGRFAM: Flagella basal body P-ring formation protein FlgA; PFAM: SAF domain; KEGG: net:Neut_0334 flagellar basal body P-ring biosynthesis protein FlgA; SMART: SAF domain; flagella basal body P-ring formation protein FlgA 1695386 10298267 NAL212_1744 Nitrosomonas sp. AL212 flagella basal body P-ring formation protein FlgA YP_004294778.1 1694637 D 153948 CDS YP_004294779.1 325982377 10298268 1695512..1695790 1 NC_015222.1 KEGG: nmu:Nmul_A0275 hypothetical protein; hypothetical protein 1695790 10298268 NAL212_1745 Nitrosomonas sp. AL212 hypothetical protein YP_004294779.1 1695512 D 153948 CDS YP_004294780.1 325982378 10298269 1695887..1696255 1 NC_015222.1 PFAM: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3; KEGG: net:Neut_0867 hypothetical protein; hypothetical protein 1696255 10298269 NAL212_1746 Nitrosomonas sp. AL212 hypothetical protein YP_004294780.1 1695887 D 153948 CDS YP_004294781.1 325982379 10298270 complement(1696497..1697777) 1 NC_015222.1 PFAM: Protein of unknown function DUF2130; KEGG: rfr:Rfer_0075 hypothetical protein; hypothetical protein 1697777 10298270 NAL212_1747 Nitrosomonas sp. AL212 hypothetical protein YP_004294781.1 1696497 R 153948 CDS YP_004294782.1 325982380 10298271 1698260..1700701 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; Signal transduction response regulator, receiver domain; Diguanylate cyclase, predicted; KEGG: cvi:CV_3260 hypothetical protein; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif; Signal transduction response regulator, receiver domain; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 1700701 10298271 NAL212_1748 Nitrosomonas sp. AL212 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) YP_004294782.1 1698260 D 153948 CDS YP_004294783.1 325982381 10298272 1700732..1702135 1 NC_015222.1 TIGRFAM: PAS; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain; PAS fold; ATPase-like, ATP-binding domain; KEGG: cvi:CV_3259 sensory transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; PAS; PAC motif; signal transduction histidine kinase 1702135 10298272 NAL212_1749 Nitrosomonas sp. AL212 signal transduction histidine kinase YP_004294783.1 1700732 D 153948 CDS YP_004294784.1 325982382 10298273 complement(1702113..1702532) 1 NC_015222.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: nmu:Nmul_A1047 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1702532 10298273 NAL212_1750 Nitrosomonas sp. AL212 biopolymer transport protein ExbD/TolR YP_004294784.1 1702113 R 153948 CDS YP_004294785.1 325982383 10298274 complement(1702532..1703293) 1 NC_015222.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: nmu:Nmul_A1048 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1703293 10298274 NAL212_1751 Nitrosomonas sp. AL212 MotA/TolQ/ExbB proton channel YP_004294785.1 1702532 R 153948 CDS YP_004294786.1 325982384 10298275 complement(1703297..1704010) 1 NC_015222.1 KEGG: nmu:Nmul_A1049 TonB-like; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal; TonB family protein 1704010 10298275 NAL212_1752 Nitrosomonas sp. AL212 TonB family protein YP_004294786.1 1703297 R 153948 CDS YP_004294787.1 325982385 10298276 1704325..1704741 1 NC_015222.1 PFAM: RDD; KEGG: net:Neut_0589 RDD domain-containing protein; RDD domain-containing protein 1704741 10298276 NAL212_1753 Nitrosomonas sp. AL212 RDD domain-containing protein YP_004294787.1 1704325 D 153948 CDS YP_004294788.1 325982386 10298277 1704963..1705895 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dat:HRM2_39450 GGDEF domain family protein; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 1705895 10298277 NAL212_1754 Nitrosomonas sp. AL212 diguanylate cyclase YP_004294788.1 1704963 D 153948 CDS YP_004294789.1 325982387 10298278 1706063..1708363 1 NC_015222.1 KEGG: net:Neut_2488 cell divisionFtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase FtsK gamma; SMART: DNA translocase FtsK gamma; ATPase, AAA+ type, core; cell division protein FtsK/SpoIIIE 1708363 10298278 NAL212_1755 Nitrosomonas sp. AL212 cell division protein FtsK/SpoIIIE YP_004294789.1 1706063 D 153948 CDS YP_004294790.1 325982388 10298279 1708420..1709043 1 NC_015222.1 KEGG: neu:NE1052 outer membrane lipoprotein carrier protein LolA; TIGRFAM: Outer membrane lipoprotein carrier protein LolA, Proteobacteria; PFAM: Outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 1709043 10298279 NAL212_1756 Nitrosomonas sp. AL212 outer membrane lipoprotein carrier protein LolA YP_004294790.1 1708420 D 153948 CDS YP_004294791.1 325982389 10298280 1709021..1710355 1 NC_015222.1 KEGG: nmu:Nmul_A0179 recombination factor protein RarA; PFAM: MgsA AAA+ ATPase C-terminal; ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; MgsA AAA+ ATPase domain-containing protein 1710355 10298280 NAL212_1757 Nitrosomonas sp. AL212 MgsA AAA+ ATPase domain-containing protein YP_004294791.1 1709021 D 153948 CDS YP_004294792.1 325982390 10298281 1710391..1711707 1 NC_015222.1 TIGRFAM: Seryl-tRNA synthetase, class IIa; KEGG: neu:NE0180 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal; seryl-tRNA synthetase 1711707 10298281 NAL212_1758 Nitrosomonas sp. AL212 seryl-tRNA synthetase YP_004294792.1 1710391 D 153948 CDS YP_004294793.1 325982391 10298282 1711751..1712437 1 NC_015222.1 KEGG: neu:NE0179 hypothetical protein; hypothetical protein 1712437 10298282 NAL212_1759 Nitrosomonas sp. AL212 hypothetical protein YP_004294793.1 1711751 D 153948 CDS YP_004294794.1 325982392 10298283 complement(1712507..1713394) 1 NC_015222.1 PFAM: Putative exonuclease, RdgC; KEGG: mei:Msip34_2737 putative exonuclease RdgC; exonuclease RdgC 1713394 10298283 NAL212_1760 Nitrosomonas sp. AL212 exonuclease RdgC YP_004294794.1 1712507 R 153948 CDS YP_004294795.1 325982393 10298284 1713442..1713774 1 NC_015222.1 KEGG: net:Neut_2161 hypothetical protein; hypothetical protein 1713774 10298284 NAL212_1761 Nitrosomonas sp. AL212 hypothetical protein YP_004294795.1 1713442 D 153948 CDS YP_004294796.1 325982394 10298285 1713908..1716130 1 NC_015222.1 KEGG: har:HEAR3018 putative polyribonucleotide nucleotidyltransferase; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA-binding domain; SMART: Resolvase, RNase H-like fold; RNA-binding domain, S1; Helix-hairpin-helix DNA-binding motif, class 1; Tex-like protein 1716130 10298285 NAL212_1762 Nitrosomonas sp. AL212 Tex-like protein YP_004294796.1 1713908 D 153948 CDS YP_004294797.1 325982395 10298287 1716846..1717832 1 NC_015222.1 KEGG: cpi:Cpin_0412 ribonuclease BN; TIGRFAM: Ribonuclease BN; PFAM: Ribonuclease BN-related; ribonuclease BN 1717832 10298287 NAL212_1763 Nitrosomonas sp. AL212 ribonuclease BN YP_004294797.1 1716846 D 153948 CDS YP_004294798.1 325982396 10298288 complement(1717958..1718785) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: net:Neut_1814 integrase catalytic subunit; integrase catalytic region 1718785 10298288 NAL212_1764 Nitrosomonas sp. AL212 integrase catalytic region YP_004294798.1 1717958 R 153948 CDS YP_004294799.1 325982397 10298291 complement(1720486..1720809) 1 NC_015222.1 KEGG: net:Neut_2357 transport-associated; PFAM: Transport-associated; SMART: Transport-associated and nodulation domain, bacteria; transport-associated protein 1720809 10298291 NAL212_1767 Nitrosomonas sp. AL212 transport-associated protein YP_004294799.1 1720486 R 153948 CDS YP_004294800.1 325982398 10298292 complement(1720885..1721595) 1 NC_015222.1 SMART: Cyclic nucleotide-binding domain; KEGG: vap:Vapar_5993 transcriptional regulator, Crp/Fnr family; CarD family transcriptional regulator 1721595 10298292 NAL212_1768 Nitrosomonas sp. AL212 CarD family transcriptional regulator YP_004294800.1 1720885 R 153948 CDS YP_004294801.1 325982399 10298293 complement(1721860..1722288) 1 NC_015222.1 KEGG: neu:NE0894 hypothetical protein; hypothetical protein 1722288 10298293 NAL212_1769 Nitrosomonas sp. AL212 hypothetical protein YP_004294801.1 1721860 R 153948 CDS YP_004294802.1 325982400 10298294 1722442..1722834 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: net:Neut_1813 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1722834 10298294 NAL212_1770 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004294802.1 1722442 D 153948 CDS YP_004294803.1 325982401 10298297 complement(1725262..1725624) 1 NC_015222.1 KEGG: meh:M301_1744 hypothetical protein; hypothetical protein 1725624 10298297 NAL212_1773 Nitrosomonas sp. AL212 hypothetical protein YP_004294803.1 1725262 R 153948 CDS YP_004294804.1 325982402 10298300 complement(1727610..1727732) 1 NC_015222.1 KEGG: hna:Hneap_1227 integrase catalytic region; hypothetical protein 1727732 10298300 NAL212_1776 Nitrosomonas sp. AL212 hypothetical protein YP_004294804.1 1727610 R 153948 CDS YP_004294805.1 325982403 10298301 complement(1727822..1727995) 1 NC_015222.1 hypothetical protein 1727995 10298301 NAL212_1777 Nitrosomonas sp. AL212 hypothetical protein YP_004294805.1 1727822 R 153948 CDS YP_004294806.1 325982404 10298302 complement(1728083..1728349) 1 NC_015222.1 KEGG: neu:NE0998 hypothetical protein; hypothetical protein 1728349 10298302 NAL212_1778 Nitrosomonas sp. AL212 hypothetical protein YP_004294806.1 1728083 R 153948 CDS YP_004294807.1 325982405 10298303 complement(1728470..1730245) 1 NC_015222.1 PFAM: Divalent ion symporter; Regulator of K+ conductance, C-terminal; KEGG: ttu:TERTU_0455 TrkA-C domain protein; citrate transporter 1730245 10298303 NAL212_1779 Nitrosomonas sp. AL212 citrate transporter YP_004294807.1 1728470 R 153948 CDS YP_004294808.1 325982406 10298304 1730495..1731016 1 NC_015222.1 PFAM: Protein of unknown function DUF3617; KEGG: net:Neut_2093 hypothetical protein; hypothetical protein 1731016 10298304 NAL212_1780 Nitrosomonas sp. AL212 hypothetical protein YP_004294808.1 1730495 D 153948 CDS YP_004294809.1 325982407 10298305 complement(1731022..1732287) 1 NC_015222.1 TIGRFAM: Dihydrolipoamide succinyltransferase; KEGG: net:Neut_0859 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 1732287 10298305 NAL212_1781 Nitrosomonas sp. AL212 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_004294809.1 1731022 R 153948 CDS YP_004294810.1 325982408 10298306 complement(1732300..1735131) 1 NC_015222.1 SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; KEGG: neu:NE2374 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; 2-oxoglutarate dehydrogenase, E1 subunit 1735131 10298306 NAL212_1782 Nitrosomonas sp. AL212 2-oxoglutarate dehydrogenase, E1 subunit YP_004294810.1 1732300 R 153948 CDS YP_004294811.1 325982409 10298307 complement(1735158..1736459) 1 NC_015222.1 KEGG: nmu:Nmul_A0858 citrate synthase I; TIGRFAM: Citrate synthase, type II; PFAM: Citrate synthase-like; citrate synthase I 1736459 10298307 NAL212_1783 Nitrosomonas sp. AL212 citrate synthase I YP_004294811.1 1735158 R 153948 CDS YP_004294812.1 325982410 10298308 complement(1736538..1736771) 1 NC_015222.1 PFAM: Protein of unknown function DUF339; KEGG: neu:NE2372 hypothetical protein; hypothetical protein 1736771 10298308 NAL212_1784 Nitrosomonas sp. AL212 hypothetical protein YP_004294812.1 1736538 R 153948 CDS YP_004294813.1 325982411 10298309 complement(1736768..1737463) 1 NC_015222.1 KEGG: neu:NE2371 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein 1737463 10298309 NAL212_1785 Nitrosomonas sp. AL212 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004294813.1 1736768 R 153948 CDS YP_004294814.1 325982412 10298310 1737819..1738010 1 NC_015222.1 KEGG: vex:VEA_004335 hypothetical protein; hypothetical protein 1738010 10298310 NAL212_1786 Nitrosomonas sp. AL212 hypothetical protein YP_004294814.1 1737819 D 153948 CDS YP_004294815.1 325982413 10298311 1738446..1739387 1 NC_015222.1 KEGG: eba:ebA2728 curved DNA-binding protein; PFAM: Heat shock protein DnaJ, N-terminal; Chaperone DnaJ, C-terminal; SMART: Heat shock protein DnaJ, N-terminal; heat shock protein DnaJ domain-containing protein 1739387 10298311 NAL212_1787 Nitrosomonas sp. AL212 heat shock protein DnaJ domain-containing protein YP_004294815.1 1738446 D 153948 CDS YP_004294816.1 325982414 10298312 1739391..1739708 1 NC_015222.1 KEGG: csa:Csal_1427 MerR family transcriptional regulator; MerR family transcriptional regulator 1739708 10298312 NAL212_1788 Nitrosomonas sp. AL212 MerR family transcriptional regulator YP_004294816.1 1739391 D 153948 CDS YP_004294817.1 325982415 10298313 1739750..1740181 1 NC_015222.1 TIGRFAM: Thioredoxin; KEGG: slt:Slit_2205 thioredoxin; PFAM: Thioredoxin domain; thioredoxin 1740181 10298313 NAL212_1789 Nitrosomonas sp. AL212 thioredoxin YP_004294817.1 1739750 D 153948 CDS YP_004294818.1 325982416 10298314 1740214..1741362 1 NC_015222.1 KEGG: sat:SYN_02023 endopeptidase; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF; peptidase S1 and S6 chymotrypsin/Hap 1741362 10298314 NAL212_1790 Nitrosomonas sp. AL212 peptidase S1 and S6 chymotrypsin/Hap YP_004294818.1 1740214 D 153948 CDS YP_004294819.1 325982417 10298315 complement(1741444..1745280) 1 NC_015222.1 PFAM: Protein of unknown function DUF490; KEGG: net:Neut_1408 hypothetical protein; hypothetical protein 1745280 10298315 NAL212_1791 Nitrosomonas sp. AL212 hypothetical protein YP_004294819.1 1741444 R 153948 CDS YP_004294820.1 325982418 10298316 complement(1745290..1747197) 1 NC_015222.1 PFAM: Bacterial surface antigen (D15); Surface antigen variable number; KEGG: net:Neut_1409 surface antigen (D15); surface antigen (D15) 1747197 10298316 NAL212_1792 Nitrosomonas sp. AL212 surface antigen (D15) YP_004294820.1 1745290 R 153948 CDS YP_004294821.1 325982419 10298317 complement(1747302..1748285) 1 NC_015222.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: neu:NE1170 putative dihydroflavonol-4-reductase; NAD-dependent epimerase/dehydratase 1748285 10298317 NAL212_1793 Nitrosomonas sp. AL212 NAD-dependent epimerase/dehydratase YP_004294821.1 1747302 R 153948 CDS YP_004294822.1 325982420 10298318 complement(1748282..1749304) 1 NC_015222.1 PFAM: Ketopantoate reductase ApbA/PanE, C-terminal; Ketopantoate reductase ApbA/PanE, N-terminal; KEGG: vdi:Vdis_0590 2-dehydropantoate 2-reductase; ketopantoate reductase ApbA/PanE domain-containing protein 1749304 10298318 NAL212_1794 Nitrosomonas sp. AL212 ketopantoate reductase ApbA/PanE domain-containing protein YP_004294822.1 1748282 R 153948 CDS YP_004294823.1 325982421 10298319 complement(1749553..1750572) 1 NC_015222.1 KEGG: mca:MCA0084 hypothetical protein; hypothetical protein 1750572 10298319 NAL212_1795 Nitrosomonas sp. AL212 hypothetical protein YP_004294823.1 1749553 R 153948 CDS YP_004294824.1 325982422 10298320 1750979..1751560 1 NC_015222.1 KEGG: noc:Noc_2135 hypothetical protein; hypothetical protein 1751560 10298320 NAL212_1796 Nitrosomonas sp. AL212 hypothetical protein YP_004294824.1 1750979 D 153948 CDS YP_004294825.1 325982423 10298324 complement(1753427..1754656) 1 NC_015222.1 PFAM: Transposase, mutator type; KEGG: xcv:XCVc0009 transposase mutator family protein; transposase mutator type 1754656 10298324 NAL212_1800 Nitrosomonas sp. AL212 transposase mutator type YP_004294825.1 1753427 R 153948 CDS YP_004294826.1 325982424 10298327 complement(1756808..1758238) 1 NC_015222.1 KEGG: nmu:Nmul_A2657 DEAD/DEAH box helicase-like; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 1758238 10298327 NAL212_1803 Nitrosomonas sp. AL212 DEAD/DEAH box helicase domain-containing protein YP_004294826.1 1756808 R 153948 CDS YP_004294827.1 325982425 10298328 complement(1758465..1759154) 1 NC_015222.1 PFAM: NapC/NirT cytochrome c, N-terminal; KEGG: neu:NE2336 putative tetraheme C-cytochrome; NapC/NirT cytochrome c domain-containing protein 1759154 10298328 NAL212_1804 Nitrosomonas sp. AL212 NapC/NirT cytochrome c domain-containing protein YP_004294827.1 1758465 R 153948 CDS YP_004294828.1 325982426 10298329 complement(1759154..1759876) 1 NC_015222.1 KEGG: neu:NE2337 cytochrome c-554 precursor; cytochrome c-554 1759876 10298329 NAL212_1805 Nitrosomonas sp. AL212 cytochrome c-554 YP_004294828.1 1759154 R 153948 CDS YP_004294829.1 325982427 10298330 complement(1760002..1760949) 1 NC_015222.1 KEGG: nmu:Nmul_A2661 hypothetical protein; hypothetical protein 1760949 10298330 NAL212_1806 Nitrosomonas sp. AL212 hypothetical protein YP_004294829.1 1760002 R 153948 CDS YP_004294830.1 325982428 10298331 complement(1761030..1762742) 1 NC_015222.1 KEGG: neu:NE2339 hydroxylamine oxidoreductase; hydroxylamine oxidase 1762742 10298331 NAL212_1807 Nitrosomonas sp. AL212 hydroxylamine oxidase YP_004294830.1 1761030 R 153948 CDS YP_004294831.1 325982429 10298332 complement(1763019..1763282) 1 NC_015222.1 KEGG: nmu:Nmul_A1037 ribosomal protein S20; TIGRFAM: Ribosomal protein S20; PFAM: Ribosomal protein S20; 30S ribosomal protein S20 1763282 10298332 NAL212_1808 Nitrosomonas sp. AL212 30S ribosomal protein S20 YP_004294831.1 1763019 R 153948 CDS YP_004294832.1 325982430 10298333 complement(1763363..1763731) 1 NC_015222.1 KEGG: net:Neut_0690 hypothetical protein; hypothetical protein 1763731 10298333 NAL212_1809 Nitrosomonas sp. AL212 hypothetical protein YP_004294832.1 1763363 R 153948 CDS YP_004294833.1 325982431 10298334 complement(1764129..1764698) 1 NC_015222.1 KEGG: nwa:Nwat_1109 hypothetical protein; hypothetical protein 1764698 10298334 NAL212_1810 Nitrosomonas sp. AL212 hypothetical protein YP_004294833.1 1764129 R 153948 CDS YP_004294834.1 325982432 10298335 complement(1764688..1765242) 1 NC_015222.1 KEGG: nhl:Nhal_2587 hypothetical protein; hypothetical protein 1765242 10298335 NAL212_1811 Nitrosomonas sp. AL212 hypothetical protein YP_004294834.1 1764688 R 153948 CDS YP_004294835.1 325982433 10298336 complement(1765369..1766124) 1 NC_015222.1 KEGG: neu:NE2376 hypothetical protein; hypothetical protein 1766124 10298336 NAL212_1812 Nitrosomonas sp. AL212 hypothetical protein YP_004294835.1 1765369 R 153948 CDS YP_004294836.1 325982434 10298337 1766879..1768183 1 NC_015222.1 PFAM: Amidohydrolase 1; KEGG: net:Neut_1692 amidohydrolase; amidohydrolase 1768183 10298337 NAL212_1813 Nitrosomonas sp. AL212 amidohydrolase YP_004294836.1 1766879 D 153948 CDS YP_004294837.1 325982435 10298338 1768192..1769739 1 NC_015222.1 KEGG: nwa:Nwat_1114 hypothetical protein; hypothetical protein 1769739 10298338 NAL212_1814 Nitrosomonas sp. AL212 hypothetical protein YP_004294837.1 1768192 D 153948 CDS YP_004294838.1 325982436 10298339 1769818..1770063 1 NC_015222.1 KEGG: ere:EUBREC_3682 hypothetical ABC transporter extracellular binding protein; hypothetical protein 1770063 10298339 NAL212_1815 Nitrosomonas sp. AL212 hypothetical protein YP_004294838.1 1769818 D 153948 CDS YP_004294839.1 325982437 10298340 complement(1770149..1771828) 1 NC_015222.1 KEGG: nmu:Nmul_A2421 DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC; DNA repair protein RecN 1771828 10298340 NAL212_1816 Nitrosomonas sp. AL212 DNA repair protein RecN YP_004294839.1 1770149 R 153948 CDS YP_004294840.1 325982438 10298341 complement(1771854..1772726) 1 NC_015222.1 PFAM: Inorganic polyphosphate/ATP-NAD kinase, predicted; KEGG: net:Neut_0768 NAD(+)/NADH kinase family protein; ATP-NAD/AcoX kinase 1772726 10298341 NAL212_1817 Nitrosomonas sp. AL212 ATP-NAD/AcoX kinase YP_004294840.1 1771854 R 153948 CDS YP_004294841.1 325982439 10298342 1773021..1774040 1 NC_015222.1 KEGG: neu:NE1477 heat-inducible transcription repressor; TIGRFAM: Winged helix-turn-helix transcription repressor, HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA, C-terminal; Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain; heat-inducible transcription repressor HrcA 1774040 10298342 NAL212_1818 Nitrosomonas sp. AL212 heat-inducible transcription repressor HrcA YP_004294841.1 1773021 D 153948 CDS YP_004294842.1 325982440 10298343 1774179..1775264 1 NC_015222.1 TIGRFAM: Ferrochelatase; KEGG: nmu:Nmul_A2424 ferrochelatase; PFAM: Ferrochelatase; ferrochelatase 1775264 10298343 NAL212_1819 Nitrosomonas sp. AL212 ferrochelatase YP_004294842.1 1774179 D 153948 CDS YP_004294843.1 325982441 10298344 complement(1775313..1775657) 1 NC_015222.1 KEGG: nhl:Nhal_1232 hypothetical protein; hypothetical protein 1775657 10298344 NAL212_1820 Nitrosomonas sp. AL212 hypothetical protein YP_004294843.1 1775313 R 153948 CDS YP_004294844.1 325982442 10298347 1777471..1777758 1 NC_015222.1 KEGG: pbe:PB000079.01.0 Plasmodium falciparum asparagine-rich protein; hypothetical protein 1777758 10298347 NAL212_1823 Nitrosomonas sp. AL212 hypothetical protein YP_004294844.1 1777471 D 153948 CDS YP_004294845.1 325982443 10298348 1778291..1778629 1 NC_015222.1 KEGG: mca:MCA1082 hypothetical protein; hypothetical protein 1778629 10298348 NAL212_1824 Nitrosomonas sp. AL212 hypothetical protein YP_004294845.1 1778291 D 153948 CDS YP_004294846.1 325982444 10298349 1778969..1780138 1 NC_015222.1 KEGG: fps:FP1731 esterase/lipase/thioesterase family protein; hypothetical protein 1780138 10298349 NAL212_1825 Nitrosomonas sp. AL212 hypothetical protein YP_004294846.1 1778969 D 153948 CDS YP_004294847.1 325982445 10298353 complement(1782732..1783712) 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: atu:Atu4436 IS5 family transposase; transposase IS4 family protein 1783712 10298353 NAL212_1829 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004294847.1 1782732 R 153948 CDS YP_004294848.1 325982446 10298354 complement(1783804..1784685) 1 NC_015222.1 TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG: tgr:Tgr7_1549 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase 1784685 10298354 NAL212_1830 Nitrosomonas sp. AL212 UTP-glucose-1-phosphate uridylyltransferase YP_004294848.1 1783804 R 153948 CDS YP_004294849.1 325982447 10298355 complement(1784743..1785777) 1 NC_015222.1 TIGRFAM: UDP-glucose 4-epimerase; KEGG: nmu:Nmul_A0260 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 1785777 10298355 NAL212_1831 Nitrosomonas sp. AL212 UDP-glucose 4-epimerase YP_004294849.1 1784743 R 153948 CDS YP_004294850.1 325982448 10298356 complement(1785857..1786816) 1 NC_015222.1 KEGG: nmu:Nmul_A0913 hypothetical protein; hypothetical protein 1786816 10298356 NAL212_1832 Nitrosomonas sp. AL212 hypothetical protein YP_004294850.1 1785857 R 153948 CDS YP_004294851.1 325982449 10298357 complement(1786897..1788801) 1 NC_015222.1 TIGRFAM: Sulphate adenylyltransferase, large subunit; Adenylylsulphate kinase, C-terminal; KEGG: tmz:Tmz1t_1398 sulfate adenylyltransferase, large subunit; PFAM: Adenylylsulphate kinase, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; sulfate adenylyltransferase large subunit 1788801 10298357 NAL212_1833 Nitrosomonas sp. AL212 sulfate adenylyltransferase large subunit YP_004294851.1 1786897 R 153948 CDS YP_004294852.1 325982450 10298358 complement(1788801..1789697) 1 NC_015222.1 TIGRFAM: Sulphate adenylyltransferase, small subunit; KEGG: pzu:PHZ_c2263 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase; sulfate adenylyltransferase small subunit 1789697 10298358 NAL212_1834 Nitrosomonas sp. AL212 sulfate adenylyltransferase small subunit YP_004294852.1 1788801 R 153948 CDS YP_004294853.1 325982451 10298359 1789959..1790051 1 NC_015222.1 hypothetical protein 1790051 10298359 NAL212_1835 Nitrosomonas sp. AL212 hypothetical protein YP_004294853.1 1789959 D 153948 CDS YP_004294854.1 325982452 10298360 complement(1790273..1790605) 1 NC_015222.1 KEGG: mfa:Mfla_0577 putative monovalent cation/H+ antiporter subunit G; TIGRFAM: Na+/H+ antiporter subunit; PFAM: Na+/H+ antiporter subunit; monovalent cation/proton antiporter subunit MnhG/PhaG 1790605 10298360 NAL212_1836 Nitrosomonas sp. AL212 monovalent cation/proton antiporter subunit MnhG/PhaG YP_004294854.1 1790273 R 153948 CDS YP_004294855.1 325982453 10298361 complement(1790609..1790878) 1 NC_015222.1 PFAM: Multiple resistance and pH regulation protein F; KEGG: alv:Alvin_3105 multiple resistance and pH regulation protein F; multiple resistance and pH regulation protein F 1790878 10298361 NAL212_1837 Nitrosomonas sp. AL212 multiple resistance and pH regulation protein F YP_004294855.1 1790609 R 153948 CDS YP_004294856.1 325982454 10298362 complement(1790878..1791372) 1 NC_015222.1 PFAM: cation antiporter; KEGG: alv:Alvin_3104 cation antiporter; cation antiporter 1791372 10298362 NAL212_1838 Nitrosomonas sp. AL212 cation antiporter YP_004294856.1 1790878 R 153948 CDS YP_004294857.1 325982455 10298363 complement(1791369..1792904) 1 NC_015222.1 KEGG: tbd:Tbd_0495 putative monovalent cation/H+ antiporter subunit D; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) 1792904 10298363 NAL212_1839 Nitrosomonas sp. AL212 NADH dehydrogenase (quinone) YP_004294857.1 1791369 R 153948 CDS YP_004294858.1 325982456 10298364 complement(1792901..1793230) 1 NC_015222.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L/K; KEGG: tbd:Tbd_0496 putative monovalent cation/H+ antiporter subunit C; NADH-ubiquinone oxidoreductase chain 4L 1793230 10298364 NAL212_1840 Nitrosomonas sp. AL212 NADH-ubiquinone oxidoreductase chain 4L YP_004294858.1 1792901 R 153948 CDS YP_004294859.1 325982457 10298365 complement(1793230..1796034) 1 NC_015222.1 KEGG: alv:Alvin_3101 NADH/ubiquinone/plastoquinone (complex I); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; Na+/H+ antiporter MnhB subunit-related protein; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; NADH dehydrogenase (quinone) 1796034 10298365 NAL212_1841 Nitrosomonas sp. AL212 NADH dehydrogenase (quinone) YP_004294859.1 1793230 R 153948 CDS YP_004294860.1 325982458 10298366 complement(1796103..1796276) 1 NC_015222.1 hypothetical protein 1796276 10298366 NAL212_1842 Nitrosomonas sp. AL212 hypothetical protein YP_004294860.1 1796103 R 153948 CDS YP_004294861.1 325982459 10298367 1796773..1798479 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; 7TM-DISM receptor, extracellular domain, type 2; 7TM-DISM receptor, extracellular domain, type 1; KEGG: sse:Ssed_0845 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; periplasmic/7TM domain sensor diguanylate cyclase 1798479 10298367 NAL212_1843 Nitrosomonas sp. AL212 periplasmic/7TM domain sensor diguanylate cyclase YP_004294861.1 1796773 D 153948 CDS YP_004294862.1 325982460 10298368 complement(1798555..1798776) 1 NC_015222.1 KEGG: sad:SAAV_1201 putative glycerol-3-phosphate acyltransferase PlsX; hypothetical protein 1798776 10298368 NAL212_1844 Nitrosomonas sp. AL212 hypothetical protein YP_004294862.1 1798555 R 153948 CDS YP_004294863.1 325982461 10298371 1801289..1802902 1 NC_015222.1 KEGG: bur:Bcep18194_B1388 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; o-succinylbenzoate--CoA ligase 1802902 10298371 NAL212_1847 Nitrosomonas sp. AL212 o-succinylbenzoate--CoA ligase YP_004294863.1 1801289 D 153948 CDS YP_004294864.1 325982462 10298373 complement(1805015..1806322) 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase; transposase IS4 family protein 1806322 10298373 NAL212_1849 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004294864.1 1805015 R 153948 CDS YP_004294865.1 325982463 10298375 1806906..1807250 1 NC_015222.1 KEGG: neu:NE0007 hypothetical protein; hypothetical protein 1807250 10298375 NAL212_1851 Nitrosomonas sp. AL212 hypothetical protein YP_004294865.1 1806906 D 153948 CDS YP_004294866.1 325982464 10298376 complement(1807471..1808364) 1 NC_015222.1 PFAM: Peptidase M48; KEGG: net:Neut_1535 heat shock protein HtpX; peptidase M48 Ste24p 1808364 10298376 NAL212_1852 Nitrosomonas sp. AL212 peptidase M48 Ste24p YP_004294866.1 1807471 R 153948 CDS YP_004294867.1 325982465 10298377 complement(1808531..1808839) 1 NC_015222.1 PFAM: Septum formation initiator; KEGG: slt:Slit_1883 septum formation initiator; septum formation initiator 1808839 10298377 NAL212_1853 Nitrosomonas sp. AL212 septum formation initiator YP_004294867.1 1808531 R 153948 CDS YP_004294868.1 325982466 10298378 complement(1808839..1810122) 1 NC_015222.1 TIGRFAM: Enolase; KEGG: nmu:Nmul_A1228 phosphopyruvate hydratase; PFAM: Enolase, C-terminal; Enolase, N-terminal; enolase 1810122 10298378 NAL212_1854 Nitrosomonas sp. AL212 enolase YP_004294868.1 1808839 R 153948 CDS YP_004294869.1 325982467 10298379 complement(1810276..1811952) 1 NC_015222.1 TIGRFAM: CTP synthase; KEGG: nmu:Nmul_A1227 CTP synthetase; PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; CTP synthase 1811952 10298379 NAL212_1855 Nitrosomonas sp. AL212 CTP synthase YP_004294869.1 1810276 R 153948 CDS YP_004294870.1 325982468 10298380 complement(1812040..1812924) 1 NC_015222.1 PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: nmu:Nmul_A2329 fructosamine kinase; fructosamine/Ketosamine-3-kinase 1812924 10298380 NAL212_1856 Nitrosomonas sp. AL212 fructosamine/Ketosamine-3-kinase YP_004294870.1 1812040 R 153948 CDS YP_004294871.1 325982469 10298381 complement(1812908..1814344) 1 NC_015222.1 TIGRFAM: Argininosuccinate lyase; KEGG: nmu:Nmul_A2328 argininosuccinate lyase; PFAM: Lyase 1, N-terminal; argininosuccinate lyase 1814344 10298381 NAL212_1857 Nitrosomonas sp. AL212 argininosuccinate lyase YP_004294871.1 1812908 R 153948 CDS YP_004294872.1 325982470 10298382 1814586..1815200 1 NC_015222.1 KEGG: net:Neut_1268 hypothetical protein; hypothetical protein 1815200 10298382 NAL212_1858 Nitrosomonas sp. AL212 hypothetical protein YP_004294872.1 1814586 D 153948 CDS YP_004294873.1 325982471 10298383 complement(1815273..1816526) 1 NC_015222.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: nmu:Nmul_A0886 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: Enolpyruvate transferase domain; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1816526 10298383 NAL212_1859 Nitrosomonas sp. AL212 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_004294873.1 1815273 R 153948 CDS YP_004294874.1 325982472 10298384 1816678..1817067 1 NC_015222.1 KEGG: neu:NE1851 hypothetical protein; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 1817067 10298384 NAL212_1860 Nitrosomonas sp. AL212 endoribonuclease L-PSP YP_004294874.1 1816678 D 153948 CDS YP_004294875.1 325982473 10298385 1817072..1819111 1 NC_015222.1 TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; Helicase, C-terminal; KEGG: nmu:Nmul_A0884 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; ATP-dependent DNA helicase RecG 1819111 10298385 NAL212_1861 Nitrosomonas sp. AL212 ATP-dependent DNA helicase RecG YP_004294875.1 1817072 D 153948 CDS YP_004294876.1 325982474 10298387 complement(1819452..1819874) 1 NC_015222.1 KEGG: smm:Smp_075140 hypothetical protein; hypothetical protein 1819874 10298387 NAL212_1863 Nitrosomonas sp. AL212 hypothetical protein YP_004294876.1 1819452 R 153948 CDS YP_004294877.1 325982475 10298390 complement(1822111..1822410) 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: rms:RMA_0745 transposase; transposase IS3/IS911 family protein 1822410 10298390 NAL212_1866 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004294877.1 1822111 R 153948 CDS YP_004294878.1 325982476 10298391 1822554..1822829 1 NC_015222.1 hypothetical protein 1822829 10298391 NAL212_1867 Nitrosomonas sp. AL212 hypothetical protein YP_004294878.1 1822554 D 153948 CDS YP_004294879.1 325982477 10298392 1822896..1823270 1 NC_015222.1 KEGG: maq:Maqu_0075 hypothetical protein; hypothetical protein 1823270 10298392 NAL212_1868 Nitrosomonas sp. AL212 hypothetical protein YP_004294879.1 1822896 D 153948 CDS YP_004294880.1 325982478 10298394 complement(1823730..1824092) 1 NC_015222.1 KEGG: pic:PICST_49245 hypothetical protein; hypothetical protein 1824092 10298394 NAL212_1870 Nitrosomonas sp. AL212 hypothetical protein YP_004294880.1 1823730 R 153948 CDS YP_004294881.1 325982479 10298395 1824457..1824771 1 NC_015222.1 KEGG: pcu:pc0902 hypothetical protein; hypothetical protein 1824771 10298395 NAL212_1871 Nitrosomonas sp. AL212 hypothetical protein YP_004294881.1 1824457 D 153948 CDS YP_004294882.1 325982480 10298396 complement(1824778..1826115) 1 NC_015222.1 PFAM: Protein of unknown function DUF3422; KEGG: pna:Pnap_2555 hypothetical protein; hypothetical protein 1826115 10298396 NAL212_1872 Nitrosomonas sp. AL212 hypothetical protein YP_004294882.1 1824778 R 153948 CDS YP_004294883.1 325982481 10298397 1826285..1827622 1 NC_015222.1 TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; KEGG: nmu:Nmul_A2364 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; adenosylmethionine--8-amino-7-oxononanoate aminotransferase 1827622 10298397 NAL212_1873 Nitrosomonas sp. AL212 adenosylmethionine--8-amino-7-oxononanoate aminotransferase YP_004294883.1 1826285 D 153948 CDS YP_004294884.1 325982482 10298398 1827645..1829042 1 NC_015222.1 KEGG: neu:NE0025 metallo-beta-lactamase superfamily protein; PFAM: Beta-Casp domain; RNA-metabolising metallo-beta-lactamase; Beta-lactamase-like; SMART: Beta-lactamase-like; beta-Casp domain 1829042 10298398 NAL212_1874 Nitrosomonas sp. AL212 beta-Casp domain YP_004294884.1 1827645 D 153948 CDS YP_004294885.1 325982483 10298399 1829384..1830352 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: mno:Mnod_5003 transposase IS4 family protein; transposase IS4 family protein 1830352 10298399 NAL212_1875 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004294885.1 1829384 D 153948 CDS YP_004294886.1 325982484 10298400 1830536..1830907 1 NC_015222.1 PFAM: Transposase (putative), IS66 Orf2-like; KEGG: eba:ebB55 transposase, fragment; IS66 Orf2 family protein 1830907 10298400 NAL212_1876 Nitrosomonas sp. AL212 IS66 Orf2 family protein YP_004294886.1 1830536 D 153948 CDS YP_004294887.1 325982485 10298401 1830961..1832544 1 NC_015222.1 PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase; transposase IS66 1832544 10298401 NAL212_1877 Nitrosomonas sp. AL212 transposase IS66 YP_004294887.1 1830961 D 153948 CDS YP_004294888.1 325982486 10298406 complement(1835036..1835401) 1 NC_015222.1 KEGG: pyo:PY01157 dentin phosphoryn; hypothetical protein 1835401 10298406 NAL212_1882 Nitrosomonas sp. AL212 hypothetical protein YP_004294888.1 1835036 R 153948 CDS YP_004294889.1 325982487 10298407 1835931..1836530 1 NC_015222.1 KEGG: mei:Msip34_2442 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif putative anchor domain-containing protein 1836530 10298407 NAL212_1883 Nitrosomonas sp. AL212 PEP motif putative anchor domain-containing protein YP_004294889.1 1835931 D 153948 CDS YP_004294890.1 325982488 10298408 complement(1836605..1838221) 1 NC_015222.1 KEGG: amr:AM1_6172 IS5 family transposase; IS5 family transposase 1838221 10298408 NAL212_1884 Nitrosomonas sp. AL212 IS5 family transposase YP_004294890.1 1836605 R 153948 CDS YP_004294891.1 325982489 10298409 complement(1838427..1838912) 1 NC_015222.1 KEGG: mae:Maeo_0822 hypothetical protein; hypothetical protein 1838912 10298409 NAL212_1885 Nitrosomonas sp. AL212 hypothetical protein YP_004294891.1 1838427 R 153948 CDS YP_004294892.1 325982490 10298410 complement(1839066..1839275) 1 NC_015222.1 KEGG: rsc:RCFBP_11249 hypothetical protein; hypothetical protein 1839275 10298410 NAL212_1886 Nitrosomonas sp. AL212 hypothetical protein YP_004294892.1 1839066 R 153948 CDS YP_004294893.1 325982491 10298411 1839561..1840940 1 NC_015222.1 PFAM: Mechanosensitive ion channel MscS; Transport-associated; KEGG: mct:MCR_0648 mechanosensitive ion channel family protein MscS; mechanosensitive ion channel MscS 1840940 10298411 NAL212_1887 Nitrosomonas sp. AL212 mechanosensitive ion channel MscS YP_004294893.1 1839561 D 153948 CDS YP_004294894.1 325982492 10298412 complement(1841007..1841297) 1 NC_015222.1 KEGG: nhl:Nhal_1698 hypothetical protein; hypothetical protein 1841297 10298412 NAL212_1888 Nitrosomonas sp. AL212 hypothetical protein YP_004294894.1 1841007 R 153948 CDS YP_004294895.1 325982493 10298413 1841462..1842769 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase; transposase IS4 family protein 1842769 10298413 NAL212_1889 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004294895.1 1841462 D 153948 CDS YP_004294896.1 325982494 10298414 complement(1843093..1844187) 1 NC_015222.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: dat:HRM2_00760 hypothetical protein; endonuclease/exonuclease/phosphatase 1844187 10298414 NAL212_1890 Nitrosomonas sp. AL212 endonuclease/exonuclease/phosphatase YP_004294896.1 1843093 R 153948 CDS YP_004294897.1 325982495 10298415 1844667..1845098 1 NC_015222.1 PFAM: Transposase IS200-like; KEGG: plu:plu4843 IS200 family transposase; transposase IS200-family protein 1845098 10298415 NAL212_1891 Nitrosomonas sp. AL212 transposase IS200-family protein YP_004294897.1 1844667 D 153948 CDS YP_004294898.1 325982496 10298417 complement(1846528..1846905) 1 NC_015222.1 PFAM: Protein of unknown function DUF883, ElaB; KEGG: net:Neut_2354 hypothetical protein; hypothetical protein 1846905 10298417 NAL212_1893 Nitrosomonas sp. AL212 hypothetical protein YP_004294898.1 1846528 R 153948 CDS YP_004294899.1 325982497 10298418 complement(1846975..1847238) 1 NC_015222.1 PFAM: Protein of unknown function DUF883, ElaB; KEGG: net:Neut_2354 hypothetical protein; hypothetical protein 1847238 10298418 NAL212_1894 Nitrosomonas sp. AL212 hypothetical protein YP_004294899.1 1846975 R 153948 CDS YP_004294900.1 325982498 10298419 complement(1847460..1848047) 1 NC_015222.1 KEGG: rpb:RPB_0803 5'-nucleotidase; 5'-nucleotidase 1848047 10298419 NAL212_1895 Nitrosomonas sp. AL212 5'-nucleotidase YP_004294900.1 1847460 R 153948 CDS YP_004294901.1 325982499 10298421 complement(1849298..1849594) 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: net:Neut_1813 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1849594 10298421 NAL212_1897 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004294901.1 1849298 R 153948 CDS YP_004294902.1 325982500 10298422 1849790..1851187 1 NC_015222.1 KEGG: meh:M301_0983 phospholipase D/transphosphatidylase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; phospholipase D/Transphosphatidylase 1851187 10298422 NAL212_1898 Nitrosomonas sp. AL212 phospholipase D/Transphosphatidylase YP_004294902.1 1849790 D 153948 CDS YP_004294903.1 325982501 10298424 1852516..1852701 1 NC_015222.1 KEGG: hoh:Hoch_5517 hypothetical protein; hypothetical protein 1852701 10298424 NAL212_1900 Nitrosomonas sp. AL212 hypothetical protein YP_004294903.1 1852516 D 153948 CDS YP_004294904.1 325982502 10298425 1852698..1852796 1 NC_015222.1 hypothetical protein 1852796 10298425 NAL212_1901 Nitrosomonas sp. AL212 hypothetical protein YP_004294904.1 1852698 D 153948 CDS YP_004294905.1 325982503 10298426 1852891..1853751 1 NC_015222.1 PFAM: Uncharacterised protein family, zinc metallopeptidase putative; KEGG: gme:Gmet_2726 hypothetical protein; hypothetical protein 1853751 10298426 NAL212_1902 Nitrosomonas sp. AL212 hypothetical protein YP_004294905.1 1852891 D 153948 CDS YP_004294906.1 325982504 10298427 complement(1854171..1854863) 1 NC_015222.1 PFAM: Protein of unknown function DUF3465; KEGG: neu:NE2443 hypothetical protein; hypothetical protein 1854863 10298427 NAL212_1903 Nitrosomonas sp. AL212 hypothetical protein YP_004294906.1 1854171 R 153948 CDS YP_004294907.1 325982505 10298428 complement(1855577..1855729) 1 NC_015222.1 KEGG: ckr:CKR_2465 hypothetical protein; hypothetical protein 1855729 10298428 NAL212_1904 Nitrosomonas sp. AL212 hypothetical protein YP_004294907.1 1855577 R 153948 CDS YP_004294908.1 325982506 10298430 1856962..1857141 1 NC_015222.1 KEGG: gym:GYMC10_3357 protein of unknown function DUF1232; hypothetical protein 1857141 10298430 NAL212_1906 Nitrosomonas sp. AL212 hypothetical protein YP_004294908.1 1856962 D 153948 CDS YP_004294909.1 325982507 10298431 1857350..1858717 1 NC_015222.1 KEGG: dar:Daro_3555 chromate transporter; TIGRFAM: Chromate transporter, long chain; PFAM: Chromate transporter; chromate ion transporter family chromate transporter 1858717 10298431 NAL212_1907 Nitrosomonas sp. AL212 chromate ion transporter family chromate transporter YP_004294909.1 1857350 D 153948 CDS YP_004294910.1 325982508 10298433 complement(1859121..1860056) 1 NC_015222.1 KEGG: net:Neut_1951 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase; adenosine kinase 1860056 10298433 NAL212_1909 Nitrosomonas sp. AL212 adenosine kinase YP_004294910.1 1859121 R 153948 CDS YP_004294911.1 325982509 10298434 complement(1860100..1861554) 1 NC_015222.1 PFAM: Glycine cleavage system P-protein, N-terminal; KEGG: nmu:Nmul_A0210 glycine dehydrogenase subunit 2; glycine cleavage system P-protein 1861554 10298434 NAL212_1910 Nitrosomonas sp. AL212 glycine cleavage system P-protein YP_004294911.1 1860100 R 153948 CDS YP_004294912.1 325982510 10298435 complement(1861577..1862074) 1 NC_015222.1 PFAM: Redoxin; KEGG: nmu:Nmul_A0211 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; redoxin domain-containing protein 1862074 10298435 NAL212_1911 Nitrosomonas sp. AL212 redoxin domain-containing protein YP_004294912.1 1861577 R 153948 CDS YP_004294913.1 325982511 10298436 complement(1862130..1863482) 1 NC_015222.1 KEGG: neu:NE0609 glycine dehydrogenase subunit 1; PFAM: Glycine cleavage system P-protein, N-terminal; glycine dehydrogenase 1863482 10298436 NAL212_1912 Nitrosomonas sp. AL212 glycine dehydrogenase YP_004294913.1 1862130 R 153948 CDS YP_004294914.1 325982512 10298437 complement(1863557..1863946) 1 NC_015222.1 KEGG: net:Neut_1954 glycine cleavage system protein H; TIGRFAM: Glycine cleavage H-protein, subgroup; PFAM: Glycine cleavage H-protein; glycine cleavage system H protein 1863946 10298437 NAL212_1913 Nitrosomonas sp. AL212 glycine cleavage system H protein YP_004294914.1 1863557 R 153948 CDS YP_004294915.1 325982513 10298438 complement(1863993..1865075) 1 NC_015222.1 PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; TIGRFAM: Glycine cleavage system T protein; HAMAP: Aminomethyltransferase; KEGG: nmu:Nmul_A0214 glycine cleavage system aminomethyltransferase T; aminomethyltransferase 1865075 10298438 NAL212_1914 Nitrosomonas sp. AL212 aminomethyltransferase YP_004294915.1 1863993 R 153948 CDS YP_004294916.1 325982514 10298439 complement(1865505..1866098) 1 NC_015222.1 KEGG: tet:TTHERM_00441910 hypothetical protein; hypothetical protein 1866098 10298439 NAL212_1915 Nitrosomonas sp. AL212 hypothetical protein YP_004294916.1 1865505 R 153948 CDS YP_004294917.1 325982515 10298440 complement(1866121..1868139) 1 NC_015222.1 PFAM: Copper resistance D; Cytochrome c, class I; KEGG: nmu:Nmul_A2760 cytochrome c, class I; copper resistance D domain-containing protein 1868139 10298440 NAL212_1916 Nitrosomonas sp. AL212 copper resistance D domain-containing protein YP_004294917.1 1866121 R 153948 CDS YP_004294918.1 325982516 10298442 complement(1868694..1869008) 1 NC_015222.1 KEGG: mei:Msip34_2654 transport-associated; PFAM: Transport-associated; SMART: Transport-associated and nodulation domain, bacteria; transport-associated protein 1869008 10298442 NAL212_1918 Nitrosomonas sp. AL212 transport-associated protein YP_004294918.1 1868694 R 153948 CDS YP_004294919.1 325982517 10298443 complement(1869123..1869473) 1 NC_015222.1 KEGG: net:Neut_1326 hypothetical protein; hypothetical protein 1869473 10298443 NAL212_1919 Nitrosomonas sp. AL212 hypothetical protein YP_004294919.1 1869123 R 153948 CDS YP_004294920.1 325982518 10298444 complement(1869612..1869839) 1 NC_015222.1 KEGG: tvo:TVN0219 multidrug efflux permease; hypothetical protein 1869839 10298444 NAL212_1920 Nitrosomonas sp. AL212 hypothetical protein YP_004294920.1 1869612 R 153948 CDS YP_004294921.1 325982519 10298445 1870000..1871199 1 NC_015222.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: nmu:Nmul_A0954 hypothetical protein; hypothetical protein 1871199 10298445 NAL212_1921 Nitrosomonas sp. AL212 hypothetical protein YP_004294921.1 1870000 D 153948 CDS YP_004294922.1 325982520 10298446 1871334..1872626 1 NC_015222.1 PFAM: Phosphate-selective porin O/P; KEGG: nmu:Nmul_A1267 phosphate-selective porin O and P; phosphate-selective porin O and P 1872626 10298446 NAL212_1922 Nitrosomonas sp. AL212 phosphate-selective porin O and P YP_004294922.1 1871334 D 153948 CDS YP_004294923.1 325982521 10298447 1872693..1873232 1 NC_015222.1 PFAM: Glutathione peroxidase; KEGG: alv:Alvin_2032 peroxiredoxin; glutathione peroxidase 1873232 10298447 NAL212_1923 Nitrosomonas sp. AL212 glutathione peroxidase YP_004294923.1 1872693 D 153948 CDS YP_004294924.1 325982522 10298448 1873237..1873854 1 NC_015222.1 KEGG: nmu:Nmul_A1303 hypothetical protein; hypothetical protein 1873854 10298448 NAL212_1924 Nitrosomonas sp. AL212 hypothetical protein YP_004294924.1 1873237 D 153948 CDS YP_004294925.1 325982523 10298449 complement(1874002..1875420) 1 NC_015222.1 PFAM: Peptidase C13, legumain; KEGG: app:CAP2UW1_3877 peptidase C13, legumain asparaginyl peptidase; peptidase C13, legumain asparaginyl peptidase 1875420 10298449 NAL212_1925 Nitrosomonas sp. AL212 peptidase C13, legumain asparaginyl peptidase YP_004294925.1 1874002 R 153948 CDS YP_004294926.1 325982524 10298450 1875842..1876792 1 NC_015222.1 KEGG: rfr:Rfer_0364 response regulator receiver modulated CheW protein; PFAM: CheW-like protein; Signal transduction response regulator, receiver domain; SMART: CheW-like protein; Signal transduction response regulator, receiver domain; response regulator receiver modulated CheW protein 1876792 10298450 NAL212_1926 Nitrosomonas sp. AL212 response regulator receiver modulated CheW protein YP_004294926.1 1875842 D 153948 CDS YP_004294927.1 325982525 10298451 complement(1876859..1877290) 1 NC_015222.1 KEGG: neu:NE0900 hypothetical protein; hypothetical protein 1877290 10298451 NAL212_1927 Nitrosomonas sp. AL212 hypothetical protein YP_004294927.1 1876859 R 153948 CDS YP_004294928.1 325982526 10298452 complement(1877400..1879292) 1 NC_015222.1 KEGG: nmu:Nmul_A1969 hypothetical protein; hypothetical protein 1879292 10298452 NAL212_1928 Nitrosomonas sp. AL212 hypothetical protein YP_004294928.1 1877400 R 153948 CDS YP_004294929.1 325982527 10298453 complement(1879305..1879577) 1 NC_015222.1 KEGG: nmu:Nmul_A1968 hypothetical protein; hypothetical protein 1879577 10298453 NAL212_1929 Nitrosomonas sp. AL212 hypothetical protein YP_004294929.1 1879305 R 153948 CDS YP_004294930.1 325982528 10298454 complement(1879640..1880236) 1 NC_015222.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nmu:Nmul_A1967 TetR family transcriptional regulator; TetR family transcriptional regulator 1880236 10298454 NAL212_1930 Nitrosomonas sp. AL212 TetR family transcriptional regulator YP_004294930.1 1879640 R 153948 CDS YP_004294931.1 325982529 10298455 complement(1880497..1880781) 1 NC_015222.1 KEGG: ttu:TERTU_3998 hypothetical protein; hypothetical protein 1880781 10298455 NAL212_1931 Nitrosomonas sp. AL212 hypothetical protein YP_004294931.1 1880497 R 153948 CDS YP_004294932.1 325982530 10298456 complement(1880791..1881450) 1 NC_015222.1 KEGG: swp:swp_4487 hypothetical protein; hypothetical protein 1881450 10298456 NAL212_1932 Nitrosomonas sp. AL212 hypothetical protein YP_004294932.1 1880791 R 153948 CDS YP_004294933.1 325982531 10298457 1881654..1882109 1 NC_015222.1 KEGG: tcr:511827.20 hypothetical protein; hypothetical protein 1882109 10298457 NAL212_1933 Nitrosomonas sp. AL212 hypothetical protein YP_004294933.1 1881654 D 153948 CDS YP_004294934.1 325982532 10298458 1882271..1883503 1 NC_015222.1 KEGG: nmu:Nmul_A1555 response regulator receiver/diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; Signal transduction response regulator, receiver domain; SMART: Diguanylate phosphodiesterase, EAL domain; Signal transduction response regulator, receiver domain; response regulator receiver modulated diguanylate phosphodiesterase 1883503 10298458 NAL212_1934 Nitrosomonas sp. AL212 response regulator receiver modulated diguanylate phosphodiesterase YP_004294934.1 1882271 D 153948 CDS YP_004294935.1 325982533 10298459 complement(1883537..1884517) 1 NC_015222.1 KEGG: nmr:Nmar_1133 kelch repeat-containing protein; PFAM: Kelch repeat type 1; SMART: Kelch repeat type 1; Kelch repeat type 1-containing protein 1884517 10298459 NAL212_1935 Nitrosomonas sp. AL212 Kelch repeat type 1-containing protein YP_004294935.1 1883537 R 153948 CDS YP_004294936.1 325982534 10298460 complement(1884571..1885083) 1 NC_015222.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: sun:SUN_0937 acetyltransferase; GCN5-like N-acetyltransferase 1885083 10298460 NAL212_1936 Nitrosomonas sp. AL212 GCN5-like N-acetyltransferase YP_004294936.1 1884571 R 153948 CDS YP_004294937.1 325982535 10298461 complement(1885125..1885508) 1 NC_015222.1 PFAM: Invasion gene expression up-regulator, SirB; KEGG: nmu:Nmul_A2077 invasion gene expression up-regulator, SirB; invasion gene expression up-regulator SirB 1885508 10298461 NAL212_1937 Nitrosomonas sp. AL212 invasion gene expression up-regulator SirB YP_004294937.1 1885125 R 153948 CDS YP_004294938.1 325982536 10298462 complement(1885511..1885993) 1 NC_015222.1 KEGG: nmu:Nmul_A2076 hypothetical protein; hypothetical protein 1885993 10298462 NAL212_1938 Nitrosomonas sp. AL212 hypothetical protein YP_004294938.1 1885511 R 153948 CDS YP_004294939.1 325982537 10298463 complement(1886085..1886483) 1 NC_015222.1 PFAM: Protein of unknown function DUF3478; KEGG: net:Neut_1678 hypothetical protein; hypothetical protein 1886483 10298463 NAL212_1939 Nitrosomonas sp. AL212 hypothetical protein YP_004294939.1 1886085 R 153948 CDS YP_004294940.1 325982538 10298464 complement(1886521..1887381) 1 NC_015222.1 PFAM: Drug/metabolite transporter; KEGG: net:Neut_1679 hypothetical protein; hypothetical protein 1887381 10298464 NAL212_1940 Nitrosomonas sp. AL212 hypothetical protein YP_004294940.1 1886521 R 153948 CDS YP_004294941.1 325982539 10298465 complement(1887426..1888538) 1 NC_015222.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: neu:NE1503 Rieske iron-sulfur protein 2Fe-2S subunit; rieske (2Fe-2S) iron-sulfur domain 1888538 10298465 NAL212_1941 Nitrosomonas sp. AL212 rieske (2Fe-2S) iron-sulfur domain YP_004294941.1 1887426 R 153948 CDS YP_004294942.1 325982540 10298466 1888762..1890171 1 NC_015222.1 KEGG: nmu:Nmul_A1578 hypothetical protein; hypothetical protein 1890171 10298466 NAL212_1942 Nitrosomonas sp. AL212 hypothetical protein YP_004294942.1 1888762 D 153948 CDS YP_004294943.1 325982541 10298467 1890228..1892441 1 NC_015222.1 TIGRFAM: Primosomal protein n; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: nmu:Nmul_A2327 primosomal protein N'; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; primosomal protein N' 1892441 10298467 NAL212_1943 Nitrosomonas sp. AL212 primosomal protein N' YP_004294943.1 1890228 D 153948 CDS YP_004294944.1 325982542 10298468 complement(1892551..1892766) 1 NC_015222.1 KEGG: pyo:PY00634 hypothetical protein; hypothetical protein 1892766 10298468 NAL212_1944 Nitrosomonas sp. AL212 hypothetical protein YP_004294944.1 1892551 R 153948 CDS YP_004294945.1 325982543 10298469 1892853..1895294 1 NC_015222.1 KEGG: nmu:Nmul_A0727 putative signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; putative signal transduction histidine kinase 1895294 10298469 NAL212_1945 Nitrosomonas sp. AL212 putative signal transduction histidine kinase YP_004294945.1 1892853 D 153948 CDS YP_004294946.1 325982544 10298470 1895296..1895952 1 NC_015222.1 KEGG: nmu:Nmul_A0728 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; two component transcriptional regulator, LuxR family 1895952 10298470 NAL212_1946 Nitrosomonas sp. AL212 two component transcriptional regulator, LuxR family YP_004294946.1 1895296 D 153948 CDS YP_004294947.1 325982545 10298471 1896079..1896543 1 NC_015222.1 KEGG: nmu:Nmul_A0729 hypothetical protein; hypothetical protein 1896543 10298471 NAL212_1947 Nitrosomonas sp. AL212 hypothetical protein YP_004294947.1 1896079 D 153948 CDS YP_004294948.1 325982546 10298472 1896673..1898049 1 NC_015222.1 PFAM: Protein of unknown function DUF1597; KEGG: nmu:Nmul_A0439 hypothetical protein; hypothetical protein 1898049 10298472 NAL212_1948 Nitrosomonas sp. AL212 hypothetical protein YP_004294948.1 1896673 D 153948 CDS YP_004294949.1 325982547 10298473 complement(1898100..1898501) 1 NC_015222.1 KEGG: nmu:Nmul_A1630 hypothetical protein; hypothetical protein 1898501 10298473 NAL212_1949 Nitrosomonas sp. AL212 hypothetical protein YP_004294949.1 1898100 R 153948 CDS YP_004294950.1 325982548 10298474 1898681..1900036 1 NC_015222.1 PFAM: Protein of unknown function DUF1597; KEGG: nmu:Nmul_A0439 hypothetical protein; hypothetical protein 1900036 10298474 NAL212_1950 Nitrosomonas sp. AL212 hypothetical protein YP_004294950.1 1898681 D 153948 CDS YP_004294951.1 325982549 10298475 1900137..1903244 1 NC_015222.1 KEGG: nmu:Nmul_A1564 hypothetical protein; hypothetical protein 1903244 10298475 NAL212_1951 Nitrosomonas sp. AL212 hypothetical protein YP_004294951.1 1900137 D 153948 CDS YP_004294952.1 325982550 10298476 complement(1903427..1905175) 1 NC_015222.1 KEGG: net:Neut_1339 DNA mismatch repair protein MutS domain-containing protein; PFAM: DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS domain-containing protein 1905175 10298476 NAL212_1952 Nitrosomonas sp. AL212 DNA mismatch repair protein MutS domain-containing protein YP_004294952.1 1903427 R 153948 CDS YP_004294953.1 325982551 10298477 1905194..1906354 1 NC_015222.1 KEGG: nmu:Nmul_A0950 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1906354 10298477 NAL212_1953 Nitrosomonas sp. AL212 RND family efflux transporter MFP subunit YP_004294953.1 1905194 D 153948 CDS YP_004294954.1 325982552 10298478 1906357..1907040 1 NC_015222.1 PFAM: ABC transporter-like; KEGG: nmu:Nmul_A0951 ABC transporter related; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 1907040 10298478 NAL212_1954 Nitrosomonas sp. AL212 phosphonate-transporting ATPase YP_004294954.1 1906357 D 153948 CDS YP_004294955.1 325982553 10298479 1907027..1908229 1 NC_015222.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: nmu:Nmul_A0953 hypothetical protein; hypothetical protein 1908229 10298479 NAL212_1955 Nitrosomonas sp. AL212 hypothetical protein YP_004294955.1 1907027 D 153948 CDS YP_004294956.1 325982554 10298480 1908425..1908868 1 NC_015222.1 PFAM: Transposase IS200-like; KEGG: pin:Ping_3671 transposase IS200-family protein; transposase IS200-family protein 1908868 10298480 NAL212_1956 Nitrosomonas sp. AL212 transposase IS200-family protein YP_004294956.1 1908425 D 153948 CDS YP_004294957.1 325982555 10298481 complement(1908928..1909122) 1 NC_015222.1 KEGG: spu:591175 similar to DiGeorge syndrome critical region gene 8; hypothetical protein 1909122 10298481 NAL212_1957 Nitrosomonas sp. AL212 hypothetical protein YP_004294957.1 1908928 R 153948 CDS YP_004294958.1 325982556 10298482 1909399..1910154 1 NC_015222.1 KEGG: pla:Plav_0800 hypothetical protein; hypothetical protein 1910154 10298482 NAL212_1958 Nitrosomonas sp. AL212 hypothetical protein YP_004294958.1 1909399 D 153948 CDS YP_004294959.1 325982557 10298485 complement(1911411..1911956) 1 NC_015222.1 KEGG: rce:RC1_3866 sulfate ABC transporter, permease protein CysW; hypothetical protein 1911956 10298485 NAL212_1959 Nitrosomonas sp. AL212 hypothetical protein YP_004294959.1 1911411 R 153948 CDS YP_004294960.1 325982558 10298486 complement(1912093..1912317) 1 NC_015222.1 KEGG: bpb:bpr_I1143 hypothetical protein; hypothetical protein 1912317 10298486 NAL212_1960 Nitrosomonas sp. AL212 hypothetical protein YP_004294960.1 1912093 R 153948 CDS YP_004294961.1 325982559 10298487 complement(1912413..1912979) 1 NC_015222.1 KEGG: pif:PITG_06149 hypothetical protein; hypothetical protein 1912979 10298487 NAL212_1961 Nitrosomonas sp. AL212 hypothetical protein YP_004294961.1 1912413 R 153948 CDS YP_004294962.1 325982560 10298488 complement(1912995..1913684) 1 NC_015222.1 KEGG: syf:Synpcc7942_0280 competence damage-inducible protein A; hypothetical protein 1913684 10298488 NAL212_1962 Nitrosomonas sp. AL212 hypothetical protein YP_004294962.1 1912995 R 153948 CDS YP_004294963.1 325982561 10298489 complement(1913971..1914606) 1 NC_015222.1 KEGG: meh:M301_1151 hypothetical protein; hypothetical protein 1914606 10298489 NAL212_1963 Nitrosomonas sp. AL212 hypothetical protein YP_004294963.1 1913971 R 153948 CDS YP_004294964.1 325982562 10298490 complement(1914603..1916012) 1 NC_015222.1 PFAM: ParB-like nuclease; KEGG: sus:Acid_1672 hypothetical protein; ParB domain-containing protein nuclease 1916012 10298490 NAL212_1964 Nitrosomonas sp. AL212 ParB domain-containing protein nuclease YP_004294964.1 1914603 R 153948 CDS YP_004294965.1 325982563 10298491 complement(1916009..1916326) 1 NC_015222.1 KEGG: rpf:Rpic12D_3450 hypothetical protein; hypothetical protein 1916326 10298491 NAL212_1965 Nitrosomonas sp. AL212 hypothetical protein YP_004294965.1 1916009 R 153948 CDS YP_004294966.1 325982564 10298492 complement(1916329..1916541) 1 NC_015222.1 KEGG: ajs:Ajs_3336 hypothetical protein; hypothetical protein 1916541 10298492 NAL212_1966 Nitrosomonas sp. AL212 hypothetical protein YP_004294966.1 1916329 R 153948 CDS YP_004294967.1 325982565 10298493 complement(1916618..1917265) 1 NC_015222.1 KEGG: pmx:PERMA_1975 DNA topoisomerase I; hypothetical protein 1917265 10298493 NAL212_1967 Nitrosomonas sp. AL212 hypothetical protein YP_004294967.1 1916618 R 153948 CDS YP_004294968.1 325982566 10298494 complement(1917384..1918160) 1 NC_015222.1 KEGG: spu:589410 hypothetical LOC589410; hypothetical protein 1918160 10298494 NAL212_1968 Nitrosomonas sp. AL212 hypothetical protein YP_004294968.1 1917384 R 153948 CDS YP_004294969.1 325982567 10298495 complement(1918268..1918555) 1 NC_015222.1 KEGG: ajs:Ajs_3338 hypothetical protein; hypothetical protein 1918555 10298495 NAL212_1969 Nitrosomonas sp. AL212 hypothetical protein YP_004294969.1 1918268 R 153948 CDS YP_004294970.1 325982568 10298496 complement(1918533..1918808) 1 NC_015222.1 PFAM: Protein of unknown function DUF497; KEGG: bbr:BB1689 hypothetical protein; hypothetical protein 1918808 10298496 NAL212_1970 Nitrosomonas sp. AL212 hypothetical protein YP_004294970.1 1918533 R 153948 CDS YP_004294971.1 325982569 10298497 complement(1918862..1920166) 1 NC_015222.1 PFAM: Integrase, catalytic core, phage; KEGG: har:HEAR3023 CP4-6 prophage; phage integrase; integrase family protein 1920166 10298497 NAL212_1971 Nitrosomonas sp. AL212 integrase family protein YP_004294971.1 1918862 R 153948 CDS YP_004294972.1 325982570 10298499 1921028..1922050 1 NC_015222.1 PFAM: Integrase, catalytic core; Resolvase, helix-turn-helix domain; KEGG: pst:PSPTO_B0040 ISPsy4, transposase; integrase catalytic region 1922050 10298499 NAL212_1973 Nitrosomonas sp. AL212 integrase catalytic region YP_004294972.1 1921028 D 153948 CDS YP_004294973.1 325982571 10298500 1922047..1922829 1 NC_015222.1 KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 1922829 10298500 NAL212_1974 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004294973.1 1922047 D 153948 CDS YP_004294974.1 325982572 10298501 complement(1923209..1924081) 1 NC_015222.1 KEGG: cph:Cpha266_1072 GCN5-related N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; GCN5-like N-acetyltransferase 1924081 10298501 NAL212_1975 Nitrosomonas sp. AL212 GCN5-like N-acetyltransferase YP_004294974.1 1923209 R 153948 CDS YP_004294975.1 325982573 10298502 complement(1924177..1924458) 1 NC_015222.1 PFAM: High potential iron-sulphur protein; KEGG: tin:Tint_1104 hypothetical protein; High potential iron-sulfur protein 1924458 10298502 NAL212_1976 Nitrosomonas sp. AL212 High potential iron-sulfur protein YP_004294975.1 1924177 R 153948 CDS YP_004294976.1 325982574 10298503 complement(1924704..1924967) 1 NC_015222.1 KEGG: hel:HELO_1487 exodeoxyribonuclease V, beta subunit; hypothetical protein 1924967 10298503 NAL212_1977 Nitrosomonas sp. AL212 hypothetical protein YP_004294976.1 1924704 R 153948 CDS YP_004294977.1 325982575 10298504 1925120..1925266 1 NC_015222.1 hypothetical protein 1925266 10298504 NAL212_1978 Nitrosomonas sp. AL212 hypothetical protein YP_004294977.1 1925120 D 153948 CDS YP_004294978.1 325982576 10298505 complement(1925279..1925461) 1 NC_015222.1 KEGG: ecb:100062488 phosphoribosylformylglycinamidine synthase; hypothetical protein 1925461 10298505 NAL212_1979 Nitrosomonas sp. AL212 hypothetical protein YP_004294978.1 1925279 R 153948 CDS YP_004294979.1 325982577 10298506 complement(1925594..1927549) 1 NC_015222.1 TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: rme:Rmet_3328 ATP-dependent DNA helicase RecQ; SMART: RQC domain; DEAD-like helicase, N-terminal; Helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; ATP-dependent DNA helicase RecQ 1927549 10298506 NAL212_1980 Nitrosomonas sp. AL212 ATP-dependent DNA helicase RecQ YP_004294979.1 1925594 R 153948 CDS YP_004294980.1 325982578 10298507 1927670..1929079 1 NC_015222.1 TIGRFAM: Glutamine synthetase type I; KEGG: nmu:Nmul_A2288 glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp; type I glutamine synthetase 1929079 10298507 NAL212_1981 Nitrosomonas sp. AL212 type I glutamine synthetase YP_004294980.1 1927670 D 153948 CDS YP_004294981.1 325982579 10298508 1929277..1929726 1 NC_015222.1 KEGG: cvi:CV_3590 hypothetical protein; hypothetical protein 1929726 10298508 NAL212_1982 Nitrosomonas sp. AL212 hypothetical protein YP_004294981.1 1929277 D 153948 CDS YP_004294982.1 325982580 10298509 1929727..1930179 1 NC_015222.1 KEGG: mms:mma_1079 hypothetical protein; hypothetical protein 1930179 10298509 NAL212_1983 Nitrosomonas sp. AL212 hypothetical protein YP_004294982.1 1929727 D 153948 CDS YP_004294983.1 325982581 10298510 complement(1930276..1931061) 1 NC_015222.1 TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: neu:NE0023 exodeoxyribonuclease III:exodeoxyribonuclease III xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 1931061 10298510 NAL212_1984 Nitrosomonas sp. AL212 exodeoxyribonuclease III Xth YP_004294983.1 1930276 R 153948 CDS YP_004294984.1 325982582 10298511 complement(1931126..1933054) 1 NC_015222.1 KEGG: nmu:Nmul_A1412 helicase C2; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal; DEAD/DEAH box helicase domain-containing protein 1933054 10298511 NAL212_1985 Nitrosomonas sp. AL212 DEAD/DEAH box helicase domain-containing protein YP_004294984.1 1931126 R 153948 CDS YP_004294985.1 325982583 10298512 complement(1933244..1933549) 1 NC_015222.1 PFAM: Uncharacterised protein family UPF0125; KEGG: nmu:Nmul_A1201 hypothetical protein; hypothetical protein 1933549 10298512 NAL212_1986 Nitrosomonas sp. AL212 hypothetical protein YP_004294985.1 1933244 R 153948 CDS YP_004294986.1 325982584 10298513 complement(1933546..1933983) 1 NC_015222.1 PFAM: Streptomyces cyclase/dehydrase; KEGG: nmu:Nmul_A1202 cyclase/dehydrase; cyclase/dehydrase 1933983 10298513 NAL212_1987 Nitrosomonas sp. AL212 cyclase/dehydrase YP_004294986.1 1933546 R 153948 CDS YP_004294987.1 325982585 10298514 1934072..1934515 1 NC_015222.1 KEGG: nmu:Nmul_A1203 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SsrA-binding protein; SsrA-binding protein 1934515 10298514 NAL212_1988 Nitrosomonas sp. AL212 SsrA-binding protein YP_004294987.1 1934072 D 153948 CDS YP_004294988.1 325982586 10298515 1934568..1935581 1 NC_015222.1 KEGG: nmu:Nmul_A1204 cytochrome oxidase assembly; HAMAP: Heme A synthase/Protoheme IX farnesyltransferase; PFAM: Heme A synthase/Protoheme IX farnesyltransferase; Heme A synthase 1935581 10298515 NAL212_1989 Nitrosomonas sp. AL212 Heme A synthase YP_004294988.1 1934568 D 153948 CDS YP_004294989.1 325982587 10298516 complement(1935649..1936848) 1 NC_015222.1 TIGRFAM: Thiolase; KEGG: neu:NE1527 acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; acetyl-CoA acetyltransferase 1936848 10298516 NAL212_1990 Nitrosomonas sp. AL212 acetyl-CoA acetyltransferase YP_004294989.1 1935649 R 153948 CDS YP_004294990.1 325982588 10298517 complement(1936872..1939403) 1 NC_015222.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG: nmu:Nmul_A0097 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein 1939403 10298517 NAL212_1991 Nitrosomonas sp. AL212 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein YP_004294990.1 1936872 R 153948 CDS YP_004294991.1 325982589 10298518 complement(1939584..1939937) 1 NC_015222.1 KEGG: bmq:BMQ_5004 hypothetical protein; TIGRFAM: Transcriptional regulator Spx/MgsR; PFAM: Arsenate reductase-like; ArsC family protein 1939937 10298518 NAL212_1992 Nitrosomonas sp. AL212 ArsC family protein YP_004294991.1 1939584 R 153948 CDS YP_004294992.1 325982590 10298519 complement(1939941..1940279) 1 NC_015222.1 PFAM: Cupin 2, conserved barrel; KEGG: cyn:Cyan7425_0091 cupin 2 conserved barrel domain protein; cupin 2 barrel domain-containing protein 1940279 10298519 NAL212_1993 Nitrosomonas sp. AL212 cupin 2 barrel domain-containing protein YP_004294992.1 1939941 R 153948 CDS YP_004294993.1 325982591 10298520 1940531..1941697 1 NC_015222.1 KEGG: mlo:mlr9349 hypothetical protein; hypothetical protein 1941697 10298520 NAL212_1994 Nitrosomonas sp. AL212 hypothetical protein YP_004294993.1 1940531 D 153948 CDS YP_004294994.1 325982592 10298521 complement(1941765..1943024) 1 NC_015222.1 PFAM: Alpha/beta hydrolase, N-terminal; KEGG: dac:Daci_6038 alpha/beta hydrolase fold protein; alpha/beta hydrolase, N-terminal protein 1943024 10298521 NAL212_1995 Nitrosomonas sp. AL212 alpha/beta hydrolase, N-terminal protein YP_004294994.1 1941765 R 153948 CDS YP_004294995.1 325982593 10298522 complement(1943035..1946730) 1 NC_015222.1 KEGG: cch:Cag_0738 VCBS; hypothetical protein 1946730 10298522 NAL212_1996 Nitrosomonas sp. AL212 hypothetical protein YP_004294995.1 1943035 R 153948 CDS YP_004294996.1 325982594 10298523 complement(1947172..1950354) 1 NC_015222.1 KEGG: cyj:Cyan7822_6760 outer membrane adhesin like proteiin; outer membrane adhesin like protein 1950354 10298523 NAL212_1997 Nitrosomonas sp. AL212 outer membrane adhesin like protein YP_004294996.1 1947172 R 153948 CDS YP_004294997.1 325982595 10298524 complement(1950369..1951820) 1 NC_015222.1 TIGRFAM: Conserved hypothetical protein CHP03032; KEGG: cch:Cag_0733 hypothetical protein; hypothetical protein 1951820 10298524 NAL212_1998 Nitrosomonas sp. AL212 hypothetical protein YP_004294997.1 1950369 R 153948 CDS YP_004294998.1 325982596 10298525 complement(1951873..1952559) 1 NC_015222.1 KEGG: neu:NE2386 SH3 domain-containing protein; PFAM: SH3, type 3; SMART: SH3-like domain, bacterial; SH3 type 3 domain-containing protein 1952559 10298525 NAL212_1999 Nitrosomonas sp. AL212 SH3 type 3 domain-containing protein YP_004294998.1 1951873 R 153948 CDS YP_004294999.1 325982597 10298526 complement(1952630..1954393) 1 NC_015222.1 TIGRFAM: Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: nmu:Nmul_A0861 succinate dehydrogenase, flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; succinate dehydrogenase, flavoprotein subunit 1954393 10298526 NAL212_2000 Nitrosomonas sp. AL212 succinate dehydrogenase, flavoprotein subunit YP_004294999.1 1952630 R 153948 CDS YP_004295000.1 325982598 10298527 complement(1954395..1954748) 1 NC_015222.1 KEGG: nmu:Nmul_A0862 succinate dehydrogenase, cytochrome b subunit; TIGRFAM: Succinate dehydrogenase, hydrophobic membrane anchor; PFAM: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit; succinate dehydrogenase, hydrophobic membrane anchor protein 1954748 10298527 NAL212_2001 Nitrosomonas sp. AL212 succinate dehydrogenase, hydrophobic membrane anchor protein YP_004295000.1 1954395 R 153948 CDS YP_004295001.1 325982599 10298528 complement(1954742..1955131) 1 NC_015222.1 KEGG: nmu:Nmul_A0863 succinate dehydrogenase, cytochrome b subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit; succinate dehydrogenase, cytochrome b556 subunit 1955131 10298528 NAL212_2002 Nitrosomonas sp. AL212 succinate dehydrogenase, cytochrome b556 subunit YP_004295001.1 1954742 R 153948 CDS YP_004295002.1 325982600 10298529 1955437..1956300 1 NC_015222.1 KEGG: mpt:Mpe_A0556 putative lipoprotein; putative lipoprotein 1956300 10298529 NAL212_2003 Nitrosomonas sp. AL212 putative lipoprotein YP_004295002.1 1955437 D 153948 CDS YP_004295003.1 325982601 10298530 1956519..1958588 1 NC_015222.1 PFAM: Haemolysin-type calcium-binding repeat; FG-GAP; KEGG: syf:Synpcc7942_1337 integrins alpha chain; hemolysin-type calcium-binding protein 1958588 10298530 NAL212_2004 Nitrosomonas sp. AL212 hemolysin-type calcium-binding protein YP_004295003.1 1956519 D 153948 CDS YP_004295004.1 325982602 10298531 1959107..1960303 1 NC_015222.1 TIGRFAM: Succinyldiaminopimelate transaminase, beta/gammaproteobacteria; KEGG: nmu:Nmul_A1850 succinyldiaminopimelate transaminase; PFAM: Aminotransferase, class I/classII; succinyldiaminopimelate transaminase 1960303 10298531 NAL212_2005 Nitrosomonas sp. AL212 succinyldiaminopimelate transaminase YP_004295004.1 1959107 D 153948 CDS YP_004295005.1 325982603 10298532 1960335..1961156 1 NC_015222.1 KEGG: neu:NE2462 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 1961156 10298532 NAL212_2006 Nitrosomonas sp. AL212 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_004295005.1 1960335 D 153948 CDS YP_004295006.1 325982604 10298533 complement(1961207..1961542) 1 NC_015222.1 PFAM: Transport-associated; KEGG: nmu:Nmul_A0093 transport-associated protein; transport-associated protein 1961542 10298533 NAL212_2007 Nitrosomonas sp. AL212 transport-associated protein YP_004295006.1 1961207 R 153948 CDS YP_004295007.1 325982605 10298534 complement(1961709..1962665) 1 NC_015222.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: neu:NE1976 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 1962665 10298534 NAL212_2008 Nitrosomonas sp. AL212 tRNA delta(2)-isopentenylpyrophosphate transferase YP_004295007.1 1961709 R 153948 CDS YP_004295008.1 325982606 10298535 1962832..1963020 1 NC_015222.1 manually curated; KEGG: neu:NE1977 putative transmembrane protein; putative transmembrane protein 1963020 10298535 NAL212_2009 Nitrosomonas sp. AL212 putative transmembrane protein YP_004295008.1 1962832 D 153948 CDS YP_004295009.1 325982607 10298536 1963069..1964280 1 NC_015222.1 KEGG: nmu:Nmul_A2547 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; PFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; hypothetical protein 1964280 10298536 NAL212_2010 Nitrosomonas sp. AL212 hypothetical protein YP_004295009.1 1963069 D 153948 CDS YP_004295010.1 325982608 10298537 complement(1964319..1964900) 1 NC_015222.1 PFAM: Methyltransferase type 11; KEGG: gsu:GSU0630 hypothetical protein; type 11 methyltransferase 1964900 10298537 NAL212_2011 Nitrosomonas sp. AL212 type 11 methyltransferase YP_004295010.1 1964319 R 153948 CDS YP_004295011.1 325982609 10298538 1965464..1967602 1 NC_015222.1 KEGG: cyt:cce_4430 putative sialidase; hypothetical protein 1967602 10298538 NAL212_2012 Nitrosomonas sp. AL212 hypothetical protein YP_004295011.1 1965464 D 153948 CDS YP_004295012.1 325982610 10298539 complement(1967730..1967891) 1 NC_015222.1 hypothetical protein 1967891 10298539 NAL212_2013 Nitrosomonas sp. AL212 hypothetical protein YP_004295012.1 1967730 R 153948 CDS YP_004295013.1 325982611 10298540 1967918..1968526 1 NC_015222.1 PFAM: LemA; KEGG: nmu:Nmul_A2119 hypothetical protein; LemA family protein 1968526 10298540 NAL212_2014 Nitrosomonas sp. AL212 LemA family protein YP_004295013.1 1967918 D 153948 CDS YP_004295014.1 325982612 10298541 1968595..1969455 1 NC_015222.1 PFAM: Protein of unknown function DUF477; KEGG: nmu:Nmul_A2118 hypothetical protein; hypothetical protein 1969455 10298541 NAL212_2015 Nitrosomonas sp. AL212 hypothetical protein YP_004295014.1 1968595 D 153948 CDS YP_004295015.1 325982613 10298542 1969456..1969956 1 NC_015222.1 PFAM: Protein of unknown function DUF477; KEGG: nmu:Nmul_A2117 hypothetical protein; hypothetical protein 1969956 10298542 NAL212_2016 Nitrosomonas sp. AL212 hypothetical protein YP_004295015.1 1969456 D 153948 CDS YP_004295016.1 325982614 10298543 1970791..1972317 1 NC_015222.1 KEGG: nmu:Nmul_A0679 cytochrome c peroxidase; cytochrome c peroxidase 1972317 10298543 NAL212_2017 Nitrosomonas sp. AL212 cytochrome c peroxidase YP_004295016.1 1970791 D 153948 CDS YP_004295017.1 325982615 10298544 1972470..1974434 1 NC_015222.1 PFAM: AsmA; KEGG: sml:Smlt3639 putative outer membrane protein assembly protein; AsmA family protein 1974434 10298544 NAL212_2018 Nitrosomonas sp. AL212 AsmA family protein YP_004295017.1 1972470 D 153948 CDS YP_004295018.1 325982616 10298545 1974460..1974774 1 NC_015222.1 PFAM: Transport-associated; KEGG: ypb:YPTS_2195 transport-associated; transport-associated protein 1974774 10298545 NAL212_2019 Nitrosomonas sp. AL212 transport-associated protein YP_004295018.1 1974460 D 153948 CDS YP_004295019.1 325982617 10298546 1974871..1976163 1 NC_015222.1 KEGG: nmu:Nmul_A1511 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03440; PFAM: Sulphatase-modifying factor; hypothetical protein 1976163 10298546 NAL212_2020 Nitrosomonas sp. AL212 hypothetical protein YP_004295019.1 1974871 D 153948 CDS YP_004295020.1 325982618 10298547 complement(1976201..1977175) 1 NC_015222.1 KEGG: pha:PSHAa1438 hypothetical protein; TIGRFAM: Methyltransferase-like; PFAM: Protein of unknown function DUF2260; methyltransferase 1977175 10298547 NAL212_2021 Nitrosomonas sp. AL212 methyltransferase YP_004295020.1 1976201 R 153948 CDS YP_004295021.1 325982619 10298548 complement(1977159..1978493) 1 NC_015222.1 KEGG: pha:PSHAa1437 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03440; PFAM: Sulphatase-modifying factor; hypothetical protein 1978493 10298548 NAL212_2022 Nitrosomonas sp. AL212 hypothetical protein YP_004295021.1 1977159 R 153948 CDS YP_004295022.1 325982620 10298549 complement(1978738..1979073) 1 NC_015222.1 KEGG: cgr:CAGL0J01727g hypothetical protein; hypothetical protein 1979073 10298549 NAL212_2023 Nitrosomonas sp. AL212 hypothetical protein YP_004295022.1 1978738 R 153948 CDS YP_004295023.1 325982621 10298550 1979467..1979778 1 NC_015222.1 PFAM: Transport-associated; KEGG: net:Neut_0492 transport-associated; transport-associated protein 1979778 10298550 NAL212_2024 Nitrosomonas sp. AL212 transport-associated protein YP_004295023.1 1979467 D 153948 CDS YP_004295024.1 325982622 10298551 complement(1979854..1980234) 1 NC_015222.1 PFAM: Uncharacterised protein family YphA; KEGG: neu:NE1546 hypothetical protein; DoxX family protein 1980234 10298551 NAL212_2025 Nitrosomonas sp. AL212 DoxX family protein YP_004295024.1 1979854 R 153948 CDS YP_004295025.1 325982623 10298552 complement(1980265..1981131) 1 NC_015222.1 PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: neu:NE1545 hypothetical protein; Pirin domain-containing protein 1981131 10298552 NAL212_2026 Nitrosomonas sp. AL212 Pirin domain-containing protein YP_004295025.1 1980265 R 153948 CDS YP_004295026.1 325982624 10298553 1981257..1982180 1 NC_015222.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: neu:NE1544 transcription regulator LysR; LysR family transcriptional regulator 1982180 10298553 NAL212_2027 Nitrosomonas sp. AL212 LysR family transcriptional regulator YP_004295026.1 1981257 D 153948 CDS YP_004295027.1 325982625 10298554 1982471..1984072 1 NC_015222.1 KEGG: neu:NE0782 putative periplasmic cell division protein (SufI); PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; bilirubin oxidase 1984072 10298554 NAL212_2028 Nitrosomonas sp. AL212 bilirubin oxidase YP_004295027.1 1982471 D 153948 CDS YP_004295028.1 325982626 10298555 1984198..1985589 1 NC_015222.1 PFAM: Sulfatase; KEGG: phe:Phep_2825 sulfatase; sulfatase 1985589 10298555 NAL212_2029 Nitrosomonas sp. AL212 sulfatase YP_004295028.1 1984198 D 153948 CDS YP_004295029.1 325982627 10298556 complement(1985799..1986170) 1 NC_015222.1 KEGG: kla:KLLA0C15719g hypothetical protein; hypothetical protein 1986170 10298556 NAL212_2030 Nitrosomonas sp. AL212 hypothetical protein YP_004295029.1 1985799 R 153948 CDS YP_004295030.1 325982628 10298557 complement(1986765..1986926) 1 NC_015222.1 KEGG: vpa:VP1728 glycine betaine transporter periplasmic subunit; hypothetical protein 1986926 10298557 NAL212_2031 Nitrosomonas sp. AL212 hypothetical protein YP_004295030.1 1986765 R 153948 CDS YP_004295031.1 325982629 10298559 complement(1987610..1988554) 1 NC_015222.1 PFAM: Radical SAM; KEGG: maq:Maqu_0146 radical SAM domain-containing protein; Radical SAM domain-containing protein 1988554 10298559 NAL212_2033 Nitrosomonas sp. AL212 Radical SAM domain-containing protein YP_004295031.1 1987610 R 153948 CDS YP_004295032.1 325982630 10298560 complement(1988557..1989603) 1 NC_015222.1 KEGG: hch:HCH_02988 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benz oquinol methylase; PFAM: Methyltransferase type 11; arsenite methyltransferase 1989603 10298560 NAL212_2034 Nitrosomonas sp. AL212 arsenite methyltransferase YP_004295032.1 1988557 R 153948 CDS YP_004295033.1 325982631 10298561 complement(1989644..1990333) 1 NC_015222.1 PFAM: Glycosyl transferase, family 2; KEGG: glo:Glov_1990 glycosyl transferase family 2; family 2 glycosyl transferase 1990333 10298561 NAL212_2035 Nitrosomonas sp. AL212 family 2 glycosyl transferase YP_004295033.1 1989644 R 153948 CDS YP_004295034.1 325982632 10298562 complement(1990326..1991015) 1 NC_015222.1 PFAM: Protein of unknown function DUF2064; KEGG: hch:HCH_04839 hypothetical protein; hypothetical protein 1991015 10298562 NAL212_2036 Nitrosomonas sp. AL212 hypothetical protein YP_004295034.1 1990326 R 153948 CDS YP_004295035.1 325982633 10298563 1991360..1992343 1 NC_015222.1 PFAM: Carbonic anhydrase, cadmium-binding; KEGG: dar:Daro_2933 histidine kinase, HAMP region: chemotaxis sensory transducer; carbonic anhydrase, cadmium-binding protein 1992343 10298563 NAL212_2037 Nitrosomonas sp. AL212 carbonic anhydrase, cadmium-binding protein YP_004295035.1 1991360 D 153948 CDS YP_004295036.1 325982634 10298564 complement(1992510..1992965) 1 NC_015222.1 PFAM: NUDIX hydrolase domain; KEGG: neu:NE2253 dATP pyrophosphohydrolase; NUDIX hydrolase 1992965 10298564 NAL212_2038 Nitrosomonas sp. AL212 NUDIX hydrolase YP_004295036.1 1992510 R 153948 CDS YP_004295037.1 325982635 10298565 complement(1992977..1994764) 1 NC_015222.1 TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; KEGG: nmu:Nmul_A0603 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain; aspartyl-tRNA synthetase 1994764 10298565 NAL212_2039 Nitrosomonas sp. AL212 aspartyl-tRNA synthetase YP_004295037.1 1992977 R 153948 CDS YP_004295038.1 325982636 10298566 complement(1994841..1995155) 1 NC_015222.1 TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative; KEGG: neu:NE2251 type I antifreeze protein; SMART: Regulatory protein, FmdB, putative; FmdB family regulatory protein 1995155 10298566 NAL212_2040 Nitrosomonas sp. AL212 FmdB family regulatory protein YP_004295038.1 1994841 R 153948 CDS YP_004295039.1 325982637 10298567 1995461..1998391 1 NC_015222.1 KEGG: nmu:Nmul_A0875 aconitate hydratase; TIGRFAM: Aconitase/iron regulatory protein 2; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel; aconitate hydratase 1 1998391 10298567 NAL212_2041 Nitrosomonas sp. AL212 aconitate hydratase 1 YP_004295039.1 1995461 D 153948 CDS YP_004295040.1 325982638 10298568 complement(1998419..2000893) 1 NC_015222.1 KEGG: nhl:Nhal_1339 hypothetical protein; hypothetical protein 2000893 10298568 NAL212_2042 Nitrosomonas sp. AL212 hypothetical protein YP_004295040.1 1998419 R 153948 CDS YP_004295041.1 325982639 10298569 complement(2001362..2001658) 1 NC_015222.1 KEGG: rpi:Rpic_3180 hypothetical protein; hypothetical protein 2001658 10298569 NAL212_2043 Nitrosomonas sp. AL212 hypothetical protein YP_004295041.1 2001362 R 153948 CDS YP_004295042.1 325982640 10298570 2001780..2001983 1 NC_015222.1 PFAM: Prophage CP4-57 regulatory; KEGG: vcj:VCD_002586 transcriptional regulator; phage transcriptional regulator, AlpA 2001983 10298570 NAL212_2044 Nitrosomonas sp. AL212 phage transcriptional regulator, AlpA YP_004295042.1 2001780 D 153948 CDS YP_004295043.1 325982641 10298571 2002169..2004799 1 NC_015222.1 KEGG: ade:Adeh_1839 hypothetical protein; hypothetical protein 2004799 10298571 NAL212_2045 Nitrosomonas sp. AL212 hypothetical protein YP_004295043.1 2002169 D 153948 CDS YP_004295044.1 325982642 10298572 2005136..2006443 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase; transposase IS4 family protein 2006443 10298572 NAL212_2046 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004295044.1 2005136 D 153948 CDS YP_004295045.1 325982643 10298573 complement(2006679..2006972) 1 NC_015222.1 KEGG: nmu:Nmul_A2196 hypothetical protein; hypothetical protein 2006972 10298573 NAL212_2047 Nitrosomonas sp. AL212 hypothetical protein YP_004295045.1 2006679 R 153948 CDS YP_004295046.1 325982644 10298574 complement(2007655..2007816) 1 NC_015222.1 KEGG: ehi:EHI_095860 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide; DnaD domain-containing protein 2007816 10298574 NAL212_2048 Nitrosomonas sp. AL212 DnaD domain-containing protein YP_004295046.1 2007655 R 153948 CDS YP_004295047.1 325982645 10298575 2008273..2008617 1 NC_015222.1 KEGG: ptm:GSPATT00013152001 hypothetical protein; hypothetical protein 2008617 10298575 NAL212_2049 Nitrosomonas sp. AL212 hypothetical protein YP_004295047.1 2008273 D 153948 CDS YP_004295048.1 325982646 10298578 complement(2010210..2011109) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit; integrase catalytic region 2011109 10298578 NAL212_2052 Nitrosomonas sp. AL212 integrase catalytic region YP_004295048.1 2010210 R 153948 CDS YP_004295049.1 325982647 10298579 complement(2011109..2011429) 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2011429 10298579 NAL212_2053 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004295049.1 2011109 R 153948 CDS YP_004295050.1 325982648 10298580 2011844..2012665 1 NC_015222.1 KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 2012665 10298580 NAL212_2054 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004295050.1 2011844 D 153948 CDS YP_004295051.1 325982649 10298581 complement(2012886..2013212) 1 NC_015222.1 KEGG: zpr:ZPR_2153 putative outer membrane protein, probably involved in nutrient binding; hypothetical protein 2013212 10298581 NAL212_2055 Nitrosomonas sp. AL212 hypothetical protein YP_004295051.1 2012886 R 153948 CDS YP_004295052.1 325982650 10298582 complement(2013426..2014712) 1 NC_015222.1 PFAM: Integrase, catalytic core, phage; KEGG: apb:SAR116_2486 phage integrase family protein; integrase family protein 2014712 10298582 NAL212_2056 Nitrosomonas sp. AL212 integrase family protein YP_004295052.1 2013426 R 153948 CDS YP_004295053.1 325982651 10298583 complement(2014868..2016430) 1 NC_015222.1 TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; KEGG: nmu:Nmul_A1199 GMP synthase; PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; NAD/GMP synthase; GMP synthase large subunit 2016430 10298583 NAL212_2057 Nitrosomonas sp. AL212 GMP synthase large subunit YP_004295053.1 2014868 R 153948 CDS YP_004295054.1 325982652 10298584 complement(2016444..2017907) 1 NC_015222.1 SMART: Cystathionine beta-synthase, core; TIGRFAM: IMP dehydrogenase; KEGG: nmu:Nmul_A1200 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; inosine-5'-monophosphate dehydrogenase 2017907 10298584 NAL212_2058 Nitrosomonas sp. AL212 inosine-5'-monophosphate dehydrogenase YP_004295054.1 2016444 R 153948 CDS YP_004295055.1 325982653 10298585 2018195..2018632 1 NC_015222.1 KEGG: slt:Slit_1463 hypothetical protein; hypothetical protein 2018632 10298585 NAL212_2059 Nitrosomonas sp. AL212 hypothetical protein YP_004295055.1 2018195 D 153948 CDS YP_004295056.1 325982654 10298586 2018651..2019973 1 NC_015222.1 KEGG: aeh:Mlg_1232 hypothetical protein; hypothetical protein 2019973 10298586 NAL212_2060 Nitrosomonas sp. AL212 hypothetical protein YP_004295056.1 2018651 D 153948 CDS YP_004295057.1 325982655 10298587 complement(2020164..2021270) 1 NC_015222.1 PFAM: WD40-like Beta Propeller; KEGG: net:Neut_1380 WD40 domain-containing protein; WD40-like beta Propeller containing protein 2021270 10298587 NAL212_2061 Nitrosomonas sp. AL212 WD40-like beta Propeller containing protein YP_004295057.1 2020164 R 153948 CDS YP_004295058.1 325982656 10298588 2021554..2022924 1 NC_015222.1 KEGG: nhl:Nhal_4025 hypothetical protein; hypothetical protein 2022924 10298588 NAL212_2062 Nitrosomonas sp. AL212 hypothetical protein YP_004295058.1 2021554 D 153948 CDS YP_004295059.1 325982657 10298589 2022918..2025722 1 NC_015222.1 KEGG: nhl:Nhal_4024 helicase domain protein; PFAM: Helicase, C-terminal; SNF2-related; SMART: Helicase, C-terminal; DEAD-like helicase, N-terminal; helicase domain-containing protein 2025722 10298589 NAL212_2063 Nitrosomonas sp. AL212 helicase domain-containing protein YP_004295059.1 2022918 D 153948 CDS YP_004295060.1 325982658 10298590 2026154..2029549 1 NC_015222.1 KEGG: net:Neut_1379 peptidase M28; PFAM: Peptidase M28; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; peptidase M28 2029549 10298590 NAL212_2064 Nitrosomonas sp. AL212 peptidase M28 YP_004295060.1 2026154 D 153948 CDS YP_004295061.1 325982659 10298592 2029888..2032293 1 NC_015222.1 KEGG: spc:Sputcn32_3987 hypothetical protein; hypothetical protein 2032293 10298592 NAL212_2066 Nitrosomonas sp. AL212 hypothetical protein YP_004295061.1 2029888 D 153948 CDS YP_004295062.1 325982660 10298593 2032599..2033255 1 NC_015222.1 KEGG: bge:BC1002_4939 peroxidase; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal; peroxidase 2033255 10298593 NAL212_2067 Nitrosomonas sp. AL212 peroxidase YP_004295062.1 2032599 D 153948 CDS YP_004295063.1 325982661 10298594 2033541..2033870 1 NC_015222.1 KEGG: cja:CJA_3561 putative lipoprotein; putative lipoprotein 2033870 10298594 NAL212_2068 Nitrosomonas sp. AL212 putative lipoprotein YP_004295063.1 2033541 D 153948 CDS YP_004295064.1 325982662 10298595 complement(2033999..2034478) 1 NC_015222.1 KEGG: slo:Shew_3054 hypothetical protein; hypothetical protein 2034478 10298595 NAL212_2069 Nitrosomonas sp. AL212 hypothetical protein YP_004295064.1 2033999 R 153948 CDS YP_004295065.1 325982663 10298596 complement(2034711..2036339) 1 NC_015222.1 KEGG: pde:Pden_0560 hemolysin-type calcium-binding region; hemolysin-type calcium-binding region 2036339 10298596 NAL212_2070 Nitrosomonas sp. AL212 hemolysin-type calcium-binding region YP_004295065.1 2034711 R 153948 CDS YP_004295066.1 325982664 10298597 complement(2036351..2037535) 1 NC_015222.1 KEGG: pnu:Pnuc_1664 GCN5-related N-acetyltransferase; hypothetical protein 2037535 10298597 NAL212_2071 Nitrosomonas sp. AL212 hypothetical protein YP_004295066.1 2036351 R 153948 CDS YP_004295067.1 325982665 10298598 2037812..2037928 1 NC_015222.1 hypothetical protein 2037928 10298598 NAL212_2072 Nitrosomonas sp. AL212 hypothetical protein YP_004295067.1 2037812 D 153948 CDS YP_004295068.1 325982666 10298599 2038065..2039216 1 NC_015222.1 TIGRFAM: Carbamoyl-phosphate synthase, small subunit; KEGG: nmu:Nmul_A0478 carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal; carbamoyl-phosphate synthase small subunit 2039216 10298599 NAL212_2073 Nitrosomonas sp. AL212 carbamoyl-phosphate synthase small subunit YP_004295068.1 2038065 D 153948 CDS YP_004295069.1 325982667 10298600 2039244..2042447 1 NC_015222.1 SMART: Methylglyoxal synthase-like domain; TIGRFAM: Carbamoyl-phosphate synthase, large subunit; KEGG: nmu:Nmul_A0479 carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthetase, large subunit, oligomerisation; Methylglyoxal synthase-like domain; Carbamoyl-phosphate synthase, large subunit, N-terminal; carbamoyl-phosphate synthase large subunit 2042447 10298600 NAL212_2074 Nitrosomonas sp. AL212 carbamoyl-phosphate synthase large subunit YP_004295069.1 2039244 D 153948 CDS YP_004295070.1 325982668 10298601 2042510..2042986 1 NC_015222.1 KEGG: neu:NE1660 transcription elongation factor GreA/GreB; TIGRFAM: Transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB, N-terminal; Transcription elongation factor, GreA/GreB, C-terminal; transcription elongation factor GreA 2042986 10298601 NAL212_2075 Nitrosomonas sp. AL212 transcription elongation factor GreA YP_004295070.1 2042510 D 153948 CDS YP_004295071.1 325982669 10298602 complement(2043002..2043355) 1 NC_015222.1 PFAM: RNA-binding, CRM domain; KEGG: hse:Hsero_1381 RNA-binding ribosomal protein; hypothetical protein 2043355 10298602 NAL212_2076 Nitrosomonas sp. AL212 hypothetical protein YP_004295071.1 2043002 R 153948 CDS YP_004295072.1 325982670 10298603 2043386..2044003 1 NC_015222.1 PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: nmu:Nmul_A0482 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ 2044003 10298603 NAL212_2077 Nitrosomonas sp. AL212 ribosomal RNA methyltransferase RrmJ/FtsJ YP_004295072.1 2043386 D 153948 CDS YP_004295073.1 325982671 10298604 2044175..2046091 1 NC_015222.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: net:Neut_0998 ATP-dependent metalloprotease FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; ATP-dependent metalloprotease FtsH 2046091 10298604 NAL212_2078 Nitrosomonas sp. AL212 ATP-dependent metalloprotease FtsH YP_004295073.1 2044175 D 153948 CDS YP_004295074.1 325982672 10298605 2046173..2047006 1 NC_015222.1 PFAM: Pterin-binding; manually curated; KEGG: nmu:Nmul_A0484 dihydropteroate synthase; TIGRFAM: Dihydropteroate synthase; dihydropteroate synthase 2047006 10298605 NAL212_2079 Nitrosomonas sp. AL212 dihydropteroate synthase YP_004295074.1 2046173 D 153948 CDS YP_004295075.1 325982673 10298606 2047063..2048421 1 NC_015222.1 TIGRFAM: Phosphoglucosamine mutase; KEGG: nmu:Nmul_A0485 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; phosphoglucosamine mutase 2048421 10298606 NAL212_2080 Nitrosomonas sp. AL212 phosphoglucosamine mutase YP_004295075.1 2047063 D 153948 CDS YP_004295076.1 325982674 10298607 complement(2048403..2048591) 1 NC_015222.1 hypothetical protein 2048591 10298607 NAL212_2081 Nitrosomonas sp. AL212 hypothetical protein YP_004295076.1 2048403 R 153948 CDS YP_004295077.1 325982675 10298608 2048609..2049607 1 NC_015222.1 TIGRFAM: Phosphate binding protein; KEGG: nmu:Nmul_A0486 phosphate binding protein; phosphate binding protein 2049607 10298608 NAL212_2082 Nitrosomonas sp. AL212 phosphate binding protein YP_004295077.1 2048609 D 153948 CDS YP_004295078.1 325982676 10298609 2049760..2051157 1 NC_015222.1 TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; Sirohaem synthase, N-terminal; KEGG: nmu:Nmul_A2313 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; Sirohaem synthase, dimerisation domain; uroporphyrin-III C-methyltransferase 2051157 10298609 NAL212_2083 Nitrosomonas sp. AL212 uroporphyrin-III C-methyltransferase YP_004295078.1 2049760 D 153948 CDS YP_004295079.1 325982677 10298610 complement(2051216..2052085) 1 NC_015222.1 TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: nmu:Nmul_A1543 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal; nicotinate-nucleotide pyrophosphorylase 2052085 10298610 NAL212_2084 Nitrosomonas sp. AL212 nicotinate-nucleotide pyrophosphorylase YP_004295079.1 2051216 R 153948 CDS YP_004295080.1 325982678 10298611 2052257..2052454 1 NC_015222.1 PFAM: Protein of unknown function DUF2292; KEGG: mei:Msip34_2148 hypothetical protein; hypothetical protein 2052454 10298611 NAL212_2085 Nitrosomonas sp. AL212 hypothetical protein YP_004295080.1 2052257 D 153948 CDS YP_004295081.1 325982679 10298612 2052608..2054317 1 NC_015222.1 KEGG: nmu:Nmul_A0508 hypothetical protein; hypothetical protein 2054317 10298612 NAL212_2086 Nitrosomonas sp. AL212 hypothetical protein YP_004295081.1 2052608 D 153948 CDS YP_004295082.1 325982680 10298613 2054349..2055347 1 NC_015222.1 KEGG: nmu:Nmul_A0507 thiosulphate-binding protein; TIGRFAM: Thiosulphate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; sulfate ABC transporter periplasmic sulfate-binding protein 2055347 10298613 NAL212_2087 Nitrosomonas sp. AL212 sulfate ABC transporter periplasmic sulfate-binding protein YP_004295082.1 2054349 D 153948 CDS YP_004295083.1 325982681 10298614 2055401..2056219 1 NC_015222.1 KEGG: neu:NE0579 domain of unknown function 2; PFAM: Diguanylate phosphodiesterase, EAL domain; SMART: Diguanylate phosphodiesterase, EAL domain; diguanylate phosphodiesterase 2056219 10298614 NAL212_2088 Nitrosomonas sp. AL212 diguanylate phosphodiesterase YP_004295083.1 2055401 D 153948 CDS YP_004295084.1 325982682 10298615 2056278..2057111 1 NC_015222.1 KEGG: nmu:Nmul_A0505 sulfate ABC transporter, permease protein CysT; TIGRFAM: Sulphate ABC transporter, permease protein CysT; Sulphate ABC transporter permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter inner membrane subunit CysT 2057111 10298615 NAL212_2089 Nitrosomonas sp. AL212 sulfate ABC transporter inner membrane subunit CysT YP_004295084.1 2056278 D 153948 CDS YP_004295085.1 325982683 10298616 2057078..2058001 1 NC_015222.1 KEGG: nmu:Nmul_A0504 sulfate ABC transporter, permease protein CysW; TIGRFAM: Sulphate ABC transporter, permease protein CysW; Sulphate ABC transporter permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter, inner membrane subunit CysW 2058001 10298616 NAL212_2090 Nitrosomonas sp. AL212 sulfate ABC transporter, inner membrane subunit CysW YP_004295085.1 2057078 D 153948 CDS YP_004295086.1 325982684 10298617 2057998..2059098 1 NC_015222.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Sulphate transport system permease protein 1; KEGG: nmu:Nmul_A0503 sulphate transport system permease protein 1; PFAM: ABC transporter-like; sulfate ABC transporter ATPase 2059098 10298617 NAL212_2091 Nitrosomonas sp. AL212 sulfate ABC transporter ATPase YP_004295086.1 2057998 D 153948 CDS YP_004295087.1 325982685 10298618 2059165..2060025 1 NC_015222.1 PFAM: Diguanylate phosphodiesterase, EAL domain; KEGG: mca:MCA0898 hypothetical protein; EAL domain-containing protein 2060025 10298618 NAL212_2092 Nitrosomonas sp. AL212 EAL domain-containing protein YP_004295087.1 2059165 D 153948 CDS YP_004295088.1 325982686 10298619 2060109..2061044 1 NC_015222.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: neu:NE0572 transcriptional regulator CysB-like protein; LysR family transcriptional regulator 2061044 10298619 NAL212_2093 Nitrosomonas sp. AL212 LysR family transcriptional regulator YP_004295088.1 2060109 D 153948 CDS YP_004295089.1 325982687 10298620 2061235..2062728 1 NC_015222.1 KEGG: nmu:Nmul_A1542 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; glutamate synthase 2062728 10298620 NAL212_2094 Nitrosomonas sp. AL212 glutamate synthase YP_004295089.1 2061235 D 153948 CDS YP_004295090.1 325982688 10298621 2062931..2065606 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; KEGG: gme:Gmet_3085 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; diguanylate cyclase/phosphodiesterase 2065606 10298621 NAL212_2095 Nitrosomonas sp. AL212 diguanylate cyclase/phosphodiesterase YP_004295090.1 2062931 D 153948 CDS YP_004295091.1 325982689 10298622 2065673..2068255 1 NC_015222.1 TIGRFAM: Chaperonin ClpB; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: nmu:Nmul_A1541 ATPase with chaperone activity; SMART: ATPase, AAA+ type, core; ATP-dependent chaperone ClpB 2068255 10298622 NAL212_2096 Nitrosomonas sp. AL212 ATP-dependent chaperone ClpB YP_004295091.1 2065673 D 153948 CDS YP_004295092.1 325982690 10298623 2068396..2069283 1 NC_015222.1 KEGG: nmu:Nmul_A1540 dihydrodipicolinate synthase; TIGRFAM: Dihydrodipicolinate synthase subfamily; PFAM: Dihydrodipicolinate synthetase; dihydrodipicolinate synthase 2069283 10298623 NAL212_2097 Nitrosomonas sp. AL212 dihydrodipicolinate synthase YP_004295092.1 2068396 D 153948 CDS YP_004295093.1 325982691 10298624 2069294..2070436 1 NC_015222.1 manually curated; KEGG: neu:NE2404 putative transmembrane protein; putative transmembrane protein 2070436 10298624 NAL212_2098 Nitrosomonas sp. AL212 putative transmembrane protein YP_004295093.1 2069294 D 153948 CDS YP_004295094.1 325982692 10298625 2070704..2071177 1 NC_015222.1 KEGG: net:Neut_2150 hypothetical protein; hypothetical protein 2071177 10298625 NAL212_2099 Nitrosomonas sp. AL212 hypothetical protein YP_004295094.1 2070704 D 153948 CDS YP_004295095.1 325982693 10298626 complement(2071203..2072540) 1 NC_015222.1 KEGG: nmu:Nmul_A1282 type I secretion outer membrane protein, TolC; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein; TolC family type I secretion outer membrane protein 2072540 10298626 NAL212_2100 Nitrosomonas sp. AL212 TolC family type I secretion outer membrane protein YP_004295095.1 2071203 R 153948 CDS YP_004295096.1 325982694 10298627 complement(2072546..2073901) 1 NC_015222.1 KEGG: nmu:Nmul_A1281 type I secretion membrane fusion protein, HlyD; TIGRFAM: Type I secretion membrane fusion protein, HlyD; PFAM: Secretion protein HlyD; HlyD family type I secretion membrane fusion protein 2073901 10298627 NAL212_2101 Nitrosomonas sp. AL212 HlyD family type I secretion membrane fusion protein YP_004295096.1 2072546 R 153948 CDS YP_004295097.1 325982695 10298628 complement(2073966..2075750) 1 NC_015222.1 SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, type I secretion system, PrtD; KEGG: nmu:Nmul_A1280 type I secretion system ATPase, PrtD; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; type I secretion system ATPase 2075750 10298628 NAL212_2102 Nitrosomonas sp. AL212 type I secretion system ATPase YP_004295097.1 2073966 R 153948 CDS YP_004295098.1 325982696 10298629 complement(2075825..2076709) 1 NC_015222.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: axy:AXYL_06298 NAD dependent epimerase/dehydratase family protein 7; NAD-dependent epimerase/dehydratase 2076709 10298629 NAL212_2103 Nitrosomonas sp. AL212 NAD-dependent epimerase/dehydratase YP_004295098.1 2075825 R 153948 CDS YP_004295099.1 325982697 10298630 complement(2076706..2077617) 1 NC_015222.1 PFAM: Glycosyl transferase, family 2; KEGG: nmu:Nmul_A2407 glycosyl transferase family protein; family 2 glycosyl transferase 2077617 10298630 NAL212_2104 Nitrosomonas sp. AL212 family 2 glycosyl transferase YP_004295099.1 2076706 R 153948 CDS YP_004295100.1 325982698 10298632 complement(2078658..2079818) 1 NC_015222.1 KEGG: vap:Vapar_1531 two component transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; two component transcriptional regulator, LuxR family 2079818 10298632 NAL212_2106 Nitrosomonas sp. AL212 two component transcriptional regulator, LuxR family YP_004295100.1 2078658 R 153948 CDS YP_004295101.1 325982699 10298633 2080401..2080655 1 NC_015222.1 PFAM: Modulator of Rho-dependent transcription termination; KEGG: neu:NE0186 hypothetical protein; Modulator of Rho-dependent transcription termination 2080655 10298633 NAL212_2107 Nitrosomonas sp. AL212 Modulator of Rho-dependent transcription termination YP_004295101.1 2080401 D 153948 CDS YP_004295102.1 325982700 10298634 2080727..2081800 1 NC_015222.1 TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form; PFAM: HhH-GPD domain; Helix-hairpin-helix motif; KEGG: neu:NE0056 HhH-GPD; SMART: HhH-GPD domain; Helix-hairpin-helix DNA-binding motif, class 1; Endonuclease III-like, iron-sulphur cluster loop motif; A/G-specific adenine glycosylase 2081800 10298634 NAL212_2108 Nitrosomonas sp. AL212 A/G-specific adenine glycosylase YP_004295102.1 2080727 D 153948 CDS YP_004295103.1 325982701 10298635 2081790..2082386 1 NC_015222.1 KEGG: nmu:Nmul_A0079 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 2082386 10298635 NAL212_2109 Nitrosomonas sp. AL212 5-formyltetrahydrofolate cyclo-ligase YP_004295103.1 2081790 D 153948 CDS YP_004295104.1 325982702 10298636 complement(2082441..2083055) 1 NC_015222.1 KEGG: nmu:Nmul_A0080 aromatic acid decarboxylase; TIGRFAM: Phenylacrylic acid decarboxylase; PFAM: Flavoprotein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2083055 10298636 NAL212_2110 Nitrosomonas sp. AL212 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_004295104.1 2082441 R 153948 CDS YP_004295105.1 325982703 10298637 complement(2083116..2084078) 1 NC_015222.1 PFAM: Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, C-terminal; Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, N-terminal; KEGG: nmu:Nmul_A0082 HPr kinase/phosphorylase; HPr kinase 2084078 10298637 NAL212_2111 Nitrosomonas sp. AL212 HPr kinase YP_004295105.1 2083116 R 153948 CDS YP_004295106.1 325982704 10298638 complement(2084065..2084547) 1 NC_015222.1 PFAM: Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; KEGG: neu:NE0060 phosphotransferase system mannitol/fructose-specific IIA domain-containing protein; putative PTS IIA-like nitrogen-regulatory protein PtsN 2084547 10298638 NAL212_2112 Nitrosomonas sp. AL212 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_004295106.1 2084065 R 153948 CDS YP_004295107.1 325982705 10298639 complement(2084655..2084978) 1 NC_015222.1 KEGG: neu:NE0061 sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; sigma 54 modulation protein/30S ribosomal protein S30EA 2084978 10298639 NAL212_2113 Nitrosomonas sp. AL212 sigma 54 modulation protein/30S ribosomal protein S30EA YP_004295107.1 2084655 R 153948 CDS YP_004295108.1 325982706 10298640 complement(2084997..2086445) 1 NC_015222.1 KEGG: nmu:Nmul_A0084 sigma-54 (RpoN); TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma 54 subunit RpoN 2086445 10298640 NAL212_2114 Nitrosomonas sp. AL212 RNA polymerase sigma 54 subunit RpoN YP_004295108.1 2084997 R 153948 CDS YP_004295109.1 325982707 10298641 complement(2086500..2087222) 1 NC_015222.1 PFAM: ABC transporter-like; KEGG: net:Neut_2302 ABC transporter-related protein; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 2087222 10298641 NAL212_2115 Nitrosomonas sp. AL212 sulfate-transporting ATPase YP_004295109.1 2086500 R 153948 CDS YP_004295110.1 325982708 10298642 complement(2087265..2087795) 1 NC_015222.1 KEGG: net:Neut_2301 OstA family protein; TIGRFAM: Lipopolysccharide assembly, LptA; PFAM: Organic solvent tolerance-like, N-terminal; lipopolysaccharide transport periplasmic protein LptA 2087795 10298642 NAL212_2116 Nitrosomonas sp. AL212 lipopolysaccharide transport periplasmic protein LptA YP_004295110.1 2087265 R 153948 CDS YP_004295111.1 325982709 10298643 complement(2087807..2088370) 1 NC_015222.1 PFAM: Lipopolysccharide assembly, LptC-related; KEGG: net:Neut_2300 hypothetical protein; hypothetical protein 2088370 10298643 NAL212_2117 Nitrosomonas sp. AL212 hypothetical protein YP_004295111.1 2087807 R 153948 CDS YP_004295112.1 325982710 10298644 2088591..2089694 1 NC_015222.1 TIGRFAM: Quinolinate synthetase A; KEGG: net:Neut_2299 quinolinate synthetase; PFAM: Quinolinate synthetase A; quinolinate synthetase complex subunit A 2089694 10298644 NAL212_2118 Nitrosomonas sp. AL212 quinolinate synthetase complex subunit A YP_004295112.1 2088591 D 153948 CDS YP_004295113.1 325982711 10298645 2089767..2090939 1 NC_015222.1 SMART: Phospholipase D/Transphosphatidylase; KEGG: neu:NE0068 phospholipase D/transphosphatidylase; phospholipase D/Transphosphatidylase 2090939 10298645 NAL212_2119 Nitrosomonas sp. AL212 phospholipase D/Transphosphatidylase YP_004295113.1 2089767 D 153948 CDS YP_004295114.1 325982712 10298646 2090993..2092033 1 NC_015222.1 KEGG: nmu:Nmul_A0607 SUA5/YciO/YrdC/YwlC; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; SUA5; Sua5/YciO/YrdC/YwlC family protein 2092033 10298646 NAL212_2120 Nitrosomonas sp. AL212 Sua5/YciO/YrdC/YwlC family protein YP_004295114.1 2090993 D 153948 CDS YP_004295115.1 325982713 10298647 2092048..2092818 1 NC_015222.1 KEGG: nmu:Nmul_A0608 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 2092818 10298647 NAL212_2121 Nitrosomonas sp. AL212 HAD-superfamily hydrolase YP_004295115.1 2092048 D 153948 CDS YP_004295116.1 325982714 10298648 2093016..2093381 1 NC_015222.1 KEGG: neu:NE2461 hypothetical protein; hypothetical protein 2093381 10298648 NAL212_2122 Nitrosomonas sp. AL212 hypothetical protein YP_004295116.1 2093016 D 153948 CDS YP_004295117.1 325982715 10298649 complement(2093446..2094513) 1 NC_015222.1 KEGG: nmu:Nmul_A0497 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; peptidase M23 2094513 10298649 NAL212_2123 Nitrosomonas sp. AL212 peptidase M23 YP_004295117.1 2093446 R 153948 CDS YP_004295118.1 325982716 10298650 complement(2094532..2095194) 1 NC_015222.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; HAMAP: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: net:Neut_2323 protein-L-isoaspartate O-methyltransferase; protein-L-isoaspartate O-methyltransferase 2095194 10298650 NAL212_2124 Nitrosomonas sp. AL212 protein-L-isoaspartate O-methyltransferase YP_004295118.1 2094532 R 153948 CDS YP_004295119.1 325982717 10298651 complement(2095220..2095984) 1 NC_015222.1 TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; KEGG: nmu:Nmul_A0495 stationary phase survival protein SurE; PFAM: Survival protein SurE-like phosphatase/nucleotidase; stationary-phase survival protein SurE 2095984 10298651 NAL212_2125 Nitrosomonas sp. AL212 stationary-phase survival protein SurE YP_004295119.1 2095220 R 153948 CDS YP_004295120.1 325982718 10298653 complement(2096216..2096593) 1 NC_015222.1 KEGG: reu:Reut_A1282 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; regulatory protein MerR 2096593 10298653 NAL212_2126 Nitrosomonas sp. AL212 regulatory protein MerR YP_004295120.1 2096216 R 153948 CDS YP_004295121.1 325982719 10298654 complement(2096583..2096879) 1 NC_015222.1 TIGRFAM: Integration host factor, alpha subunit; PFAM: Histone-like bacterial DNA-binding protein; KEGG: nmu:Nmul_A0493 integration host factor subunit alpha; SMART: Histone-like bacterial DNA-binding protein; integration host factor subunit alpha 2096879 10298654 NAL212_2127 Nitrosomonas sp. AL212 integration host factor subunit alpha YP_004295121.1 2096583 R 153948 CDS YP_004295122.1 325982720 10298655 complement(2097026..2099398) 1 NC_015222.1 TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: nmu:Nmul_A0492 phenylalanyl-tRNA synthetase subunit beta; phenylalanyl-tRNA synthetase subunit beta 2099398 10298655 NAL212_2128 Nitrosomonas sp. AL212 phenylalanyl-tRNA synthetase subunit beta YP_004295122.1 2097026 R 153948 CDS YP_004295123.1 325982721 10298656 complement(2099442..2100461) 1 NC_015222.1 KEGG: nmu:Nmul_A0491 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase; Phenylalanyl-tRNA synthetase, class II, N-terminal; phenylalanyl-tRNA synthetase subunit alpha 2100461 10298656 NAL212_2129 Nitrosomonas sp. AL212 phenylalanyl-tRNA synthetase subunit alpha YP_004295123.1 2099442 R 153948 CDS YP_004295124.1 325982722 10298657 complement(2100567..2100926) 1 NC_015222.1 KEGG: nmu:Nmul_A0490 50S ribosomal protein L20; TIGRFAM: Ribosomal protein L20; PFAM: Ribosomal protein L20; 50S ribosomal protein L20 2100926 10298657 NAL212_2130 Nitrosomonas sp. AL212 50S ribosomal protein L20 YP_004295124.1 2100567 R 153948 CDS YP_004295125.1 325982723 10298658 complement(2100940..2101137) 1 NC_015222.1 PFAM: Ribosomal protein L35; manually curated; TIGRFAM: Ribosomal protein L35, non-mitochondrial; KEGG: eba:ebC8 50S ribosomal protein L35; HAMAP: Ribosomal protein L35, non-mitochondrial; 50S ribosomal protein L35 2101137 10298658 NAL212_2131 Nitrosomonas sp. AL212 50S ribosomal protein L35 YP_004295125.1 2100940 R 153948 CDS YP_004295126.1 325982724 10298659 complement(2101248..2101802) 1 NC_015222.1 TIGRFAM: Translation initiation factor 3; HAMAP: Translation initiation factor 3; KEGG: nmu:Nmul_A0488 translation initiation factor IF-3; PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; Translation initiation factor IF-3 2101802 10298659 NAL212_2132 Nitrosomonas sp. AL212 Translation initiation factor IF-3 YP_004295126.1 2101248 R 153948 CDS YP_004295127.1 325982725 10298660 complement(2101854..2103761) 1 NC_015222.1 TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; KEGG: nmu:Nmul_A0487 threonyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase, SAD; threonyl-tRNA synthetase 2103761 10298660 NAL212_2133 Nitrosomonas sp. AL212 threonyl-tRNA synthetase YP_004295127.1 2101854 R 153948 CDS YP_004295128.1 325982726 10298661 complement(2103847..2104602) 1 NC_015222.1 KEGG: nmu:Nmul_A2658 hypothetical protein; hypothetical protein 2104602 10298661 NAL212_2134 Nitrosomonas sp. AL212 hypothetical protein YP_004295128.1 2103847 R 153948 CDS YP_004295129.1 325982727 10298662 complement(2104735..2105424) 1 NC_015222.1 PFAM: NapC/NirT cytochrome c, N-terminal; KEGG: neu:NE2336 putative tetraheme C-cytochrome; NapC/NirT cytochrome c domain-containing protein 2105424 10298662 NAL212_2135 Nitrosomonas sp. AL212 NapC/NirT cytochrome c domain-containing protein YP_004295129.1 2104735 R 153948 CDS YP_004295130.1 325982728 10298663 complement(2105424..2106146) 1 NC_015222.1 KEGG: neu:NE2337 cytochrome c-554 precursor; cytochrome c-554 2106146 10298663 NAL212_2136 Nitrosomonas sp. AL212 cytochrome c-554 YP_004295130.1 2105424 R 153948 CDS YP_004295131.1 325982729 10298664 complement(2106272..2107219) 1 NC_015222.1 KEGG: nmu:Nmul_A2661 hypothetical protein; hypothetical protein 2107219 10298664 NAL212_2137 Nitrosomonas sp. AL212 hypothetical protein YP_004295131.1 2106272 R 153948 CDS YP_004295132.1 325982730 10298665 complement(2107300..2109012) 1 NC_015222.1 KEGG: neu:NE2339 hydroxylamine oxidoreductase; hydroxylamine oxidase 2109012 10298665 NAL212_2138 Nitrosomonas sp. AL212 hydroxylamine oxidase YP_004295132.1 2107300 R 153948 CDS YP_004295133.1 325982731 10298666 complement(2109219..2113430) 1 NC_015222.1 TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 3; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 4; KEGG: nmu:Nmul_A0760 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase, N-terminal; DNA-directed RNA polymerase subunit beta' 2113430 10298666 NAL212_2139 Nitrosomonas sp. AL212 DNA-directed RNA polymerase subunit beta' YP_004295133.1 2109219 R 153948 CDS YP_004295134.1 325982732 10298667 complement(2113531..2117604) 1 NC_015222.1 KEGG: nmu:Nmul_A0759 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 2; RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 7; RNA polymerase, beta subunit, protrusion; DNA-directed RNA polymerase, beta subunit, external 1 domain; DNA-directed RNA polymerase subunit beta 2117604 10298667 NAL212_2140 Nitrosomonas sp. AL212 DNA-directed RNA polymerase subunit beta YP_004295134.1 2113531 R 153948 CDS YP_004295135.1 325982733 10298668 complement(2117758..2118138) 1 NC_015222.1 KEGG: nmu:Nmul_A0758 50S ribosomal protein L7/L12; TIGRFAM: Ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; 50S ribosomal protein L7/L12 2118138 10298668 NAL212_2141 Nitrosomonas sp. AL212 50S ribosomal protein L7/L12 YP_004295135.1 2117758 R 153948 CDS YP_004295136.1 325982734 10298669 complement(2118199..2118714) 1 NC_015222.1 KEGG: nmu:Nmul_A0757 50S ribosomal protein L10; HAMAP: Ribosomal protein L10; PFAM: Ribosomal protein L10/acidic P0; 50S ribosomal protein L10 2118714 10298669 NAL212_2142 Nitrosomonas sp. AL212 50S ribosomal protein L10 YP_004295136.1 2118199 R 153948 CDS YP_004295137.1 325982735 10298670 complement(2119022..2119717) 1 NC_015222.1 KEGG: nmu:Nmul_A0756 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1; 50S ribosomal protein L1 2119717 10298670 NAL212_2143 Nitrosomonas sp. AL212 50S ribosomal protein L1 YP_004295137.1 2119022 R 153948 CDS YP_004295138.1 325982736 10298671 complement(2119719..2120150) 1 NC_015222.1 TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, N-terminal domain; Ribosomal protein L11, C-terminal domain; KEGG: net:Neut_1799 50S ribosomal protein L11; SMART: Ribosomal protein L11; 50S ribosomal protein L11 2120150 10298671 NAL212_2144 Nitrosomonas sp. AL212 50S ribosomal protein L11 YP_004295138.1 2119719 R 153948 CDS YP_004295139.1 325982737 10298672 complement(2120266..2120799) 1 NC_015222.1 TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KEGG: nmu:Nmul_A0754 transcription antitermination protein NusG; SMART: Transcription antitermination protein, NusG, N-terminal; KOW; NusG antitermination factor 2120799 10298672 NAL212_2145 Nitrosomonas sp. AL212 NusG antitermination factor YP_004295139.1 2120266 R 153948 CDS YP_004295140.1 325982738 10298673 complement(2120817..2121161) 1 NC_015222.1 KEGG: nmu:Nmul_A0753 preprotein translocase subunit SecE; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein SecE/Sec61-gamma protein; Preprotein translocase subunit SecE 2121161 10298673 NAL212_2146 Nitrosomonas sp. AL212 Preprotein translocase subunit SecE YP_004295140.1 2120817 R 153948 CDS YP_004295141.1 325982739 10298675 complement(2121428..2122618) 1 NC_015222.1 KEGG: neu:NE2052 elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; translation elongation factor Tu 2122618 10298675 NAL212_2147 Nitrosomonas sp. AL212 translation elongation factor Tu YP_004295141.1 2121428 R 153948 CDS YP_004295142.1 325982740 10298679 complement(2123184..2124161) 1 NC_015222.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: net:Neut_1443 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 2124161 10298679 NAL212_2148 Nitrosomonas sp. AL212 ABC transporter permease YP_004295142.1 2123184 R 153948 CDS YP_004295143.1 325982741 10298680 complement(2124183..2126369) 1 NC_015222.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: nmu:Nmul_A2334 extracellular solute-binding protein; ABC transporter substrate-binding protein 2126369 10298680 NAL212_2149 Nitrosomonas sp. AL212 ABC transporter substrate-binding protein YP_004295143.1 2124183 R 153948 CDS YP_004295144.1 325982742 10298681 2126506..2127291 1 NC_015222.1 KEGG: neu:NE2205 short-chain dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR; enoyl-ACP reductase 2127291 10298681 NAL212_2150 Nitrosomonas sp. AL212 enoyl-ACP reductase YP_004295144.1 2126506 D 153948 CDS YP_004295145.1 325982743 10298682 complement(2127298..2129181) 1 NC_015222.1 PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; KEGG: net:Neut_0662 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 2129181 10298682 NAL212_2151 Nitrosomonas sp. AL212 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004295145.1 2127298 R 153948 CDS YP_004295146.1 325982744 10298685 complement(2129439..2129711) 1 NC_015222.1 KEGG: net:Neut_0661 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; histone family protein DNA-binding protein 2129711 10298685 NAL212_2152 Nitrosomonas sp. AL212 histone family protein DNA-binding protein YP_004295146.1 2129439 R 153948 CDS YP_004295147.1 325982745 10298686 complement(2129947..2130939) 1 NC_015222.1 PFAM: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal; Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal; KEGG: nmu:Nmul_A1126 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein 2130939 10298686 NAL212_2153 Nitrosomonas sp. AL212 NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein YP_004295147.1 2129947 R 153948 CDS YP_004295148.1 325982746 10298687 complement(2130936..2131418) 1 NC_015222.1 PFAM: Protein of unknown function DUF1058; KEGG: nmu:Nmul_A1125 hypothetical protein; hypothetical protein 2131418 10298687 NAL212_2154 Nitrosomonas sp. AL212 hypothetical protein YP_004295148.1 2130936 R 153948 CDS YP_004295149.1 325982747 10298688 complement(2131456..2131893) 1 NC_015222.1 KEGG: net:Neut_0658 preprotein translocase subunit SecB; TIGRFAM: Bacterial protein export chaperone SecB; PFAM: Bacterial protein export chaperone SecB; protein-export protein SecB 2131893 10298688 NAL212_2155 Nitrosomonas sp. AL212 protein-export protein SecB YP_004295149.1 2131456 R 153948 CDS YP_004295150.1 325982748 10298689 complement(2131958..2132215) 1 NC_015222.1 KEGG: net:Neut_0657 glutaredoxin 3; TIGRFAM: Glutaredoxin, GrxC; PFAM: Glutaredoxin; glutaredoxin 3 2132215 10298689 NAL212_2156 Nitrosomonas sp. AL212 glutaredoxin 3 YP_004295150.1 2131958 R 153948 CDS YP_004295151.1 325982749 10298690 complement(2132224..2132658) 1 NC_015222.1 KEGG: neu:NE2212 putative transmembrane protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein 2132658 10298690 NAL212_2157 Nitrosomonas sp. AL212 rhodanese-like protein YP_004295151.1 2132224 R 153948 CDS YP_004295152.1 325982750 10298691 complement(2132861..2134111) 1 NC_015222.1 PFAM: Cysteine-rich domain; KEGG: nmu:Nmul_A0175 glycolate oxidase iron-sulfur subunit; hypothetical protein 2134111 10298691 NAL212_2158 Nitrosomonas sp. AL212 hypothetical protein YP_004295152.1 2132861 R 153948 CDS YP_004295153.1 325982751 10298692 complement(2134112..2135188) 1 NC_015222.1 PFAM: FAD linked oxidase, N-terminal; KEGG: nmu:Nmul_A0174 glycolate oxidase FAD binding subunit; FAD linked oxidase domain-containing protein 2135188 10298692 NAL212_2159 Nitrosomonas sp. AL212 FAD linked oxidase domain-containing protein YP_004295153.1 2134112 R 153948 CDS YP_004295154.1 325982752 10298693 complement(2135194..2136648) 1 NC_015222.1 KEGG: nmu:Nmul_A0173 D-lactate dehydrogenase (cytochrome); PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; D-lactate dehydrogenase 2136648 10298693 NAL212_2160 Nitrosomonas sp. AL212 D-lactate dehydrogenase YP_004295154.1 2135194 R 153948 CDS YP_004295155.1 325982753 10298694 complement(2136657..2137562) 1 NC_015222.1 TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: nmu:Nmul_A0172 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 2-hydroxy-3-oxopropionate reductase 2137562 10298694 NAL212_2161 Nitrosomonas sp. AL212 2-hydroxy-3-oxopropionate reductase YP_004295155.1 2136657 R 153948 CDS YP_004295156.1 325982754 10298699 complement(2140765..2141745) 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: atu:Atu4436 IS5 family transposase; transposase IS4 family protein 2141745 10298699 NAL212_2166 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004295156.1 2140765 R 153948 CDS YP_004295157.1 325982755 10298700 complement(2142116..2142550) 1 NC_015222.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: nmu:Nmul_A0440 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 2142550 10298700 NAL212_2167 Nitrosomonas sp. AL212 GCN5-like N-acetyltransferase YP_004295157.1 2142116 R 153948 CDS YP_004295158.1 325982756 10298701 complement(2142567..2143871) 1 NC_015222.1 SMART: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; KEGG: nmu:Nmul_A0441 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; adenylosuccinate synthetase 2143871 10298701 NAL212_2168 Nitrosomonas sp. AL212 adenylosuccinate synthetase YP_004295158.1 2142567 R 153948 CDS YP_004295159.1 325982757 10298702 complement(2143913..2145064) 1 NC_015222.1 TIGRFAM: Histidyl-tRNA synthetase, class IIa, putative; KEGG: net:Neut_0966 ATP phosphoribosyltransferase regulatory subunit; histidyl-tRNA synthetase 2 2145064 10298702 NAL212_2169 Nitrosomonas sp. AL212 histidyl-tRNA synthetase 2 YP_004295159.1 2143913 R 153948 CDS YP_004295160.1 325982758 10298703 complement(2145105..2145290) 1 NC_015222.1 PFAM: Protein of unknown function DUF2065; KEGG: nmu:Nmul_A0443 hypothetical protein; hypothetical protein 2145290 10298703 NAL212_2170 Nitrosomonas sp. AL212 hypothetical protein YP_004295160.1 2145105 R 153948 CDS YP_004295161.1 325982759 10298704 complement(2145526..2146401) 1 NC_015222.1 TIGRFAM: HflC; PFAM: Band 7 protein; KEGG: neu:NE1284 band 7 protein; SMART: Band 7 protein; HflC protein 2146401 10298704 NAL212_2171 Nitrosomonas sp. AL212 HflC protein YP_004295161.1 2145526 R 153948 CDS YP_004295162.1 325982760 10298705 complement(2146402..2147580) 1 NC_015222.1 TIGRFAM: HflK; PFAM: Band 7 protein; Protein HflK, N-terminal; KEGG: nmu:Nmul_A0445 HflK protein; SMART: Band 7 protein; HflK protein 2147580 10298705 NAL212_2172 Nitrosomonas sp. AL212 HflK protein YP_004295162.1 2146402 R 153948 CDS YP_004295163.1 325982761 10298706 complement(2147601..2148773) 1 NC_015222.1 KEGG: neu:NE1286 GTP-binding protein HflX; TIGRFAM: GTP-binding protein, HflX; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; GTP-binding proten HflX 2148773 10298706 NAL212_2173 Nitrosomonas sp. AL212 GTP-binding proten HflX YP_004295163.1 2147601 R 153948 CDS YP_004295164.1 325982762 10298707 complement(2148788..2149033) 1 NC_015222.1 KEGG: neu:NE1287 RNA-binding protein Hfq; TIGRFAM: Host factor Hfq; PFAM: Like-Sm ribonucleoprotein (LSM) domain; RNA chaperone Hfq 2149033 10298707 NAL212_2174 Nitrosomonas sp. AL212 RNA chaperone Hfq YP_004295164.1 2148788 R 153948 CDS YP_004295165.1 325982763 10298708 complement(2149289..2150281) 1 NC_015222.1 KEGG: neu:NE1315 cytochrome c551 peroxidase; PFAM: Di-haem cytochrome c peroxidase; Cytochrome c, class I; cytochrome-c peroxidase 2150281 10298708 NAL212_2175 Nitrosomonas sp. AL212 cytochrome-c peroxidase YP_004295165.1 2149289 R 153948 CDS YP_004295166.1 325982764 10298709 complement(2150454..2151014) 1 NC_015222.1 PFAM: NUDIX hydrolase domain; KEGG: nmu:Nmul_A0449 dinucleoside polyphosphate hydrolase; NUDIX hydrolase 2151014 10298709 NAL212_2176 Nitrosomonas sp. AL212 NUDIX hydrolase YP_004295166.1 2150454 R 153948 CDS YP_004295167.1 325982765 10298710 2151227..2152936 1 NC_015222.1 KEGG: net:Neut_1247 prolyl-tRNA synthetase; TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; YbaK/aminoacyl-tRNA synthetase-associated domain; Anticodon-binding; prolyl-tRNA synthetase 2152936 10298710 NAL212_2177 Nitrosomonas sp. AL212 prolyl-tRNA synthetase YP_004295167.1 2151227 D 153948 CDS YP_004295168.1 325982766 10298711 2152924..2153502 1 NC_015222.1 PFAM: Lytic transglycosylase-like, catalytic; KEGG: neu:NE1318 SLT domain-containing protein; Lytic transglycosylase catalytic 2153502 10298711 NAL212_2178 Nitrosomonas sp. AL212 Lytic transglycosylase catalytic YP_004295168.1 2152924 D 153948 CDS YP_004295169.1 325982767 10298712 complement(2153586..2154050) 1 NC_015222.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: net:Neut_1245 redoxin domain-containing protein; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 2154050 10298712 NAL212_2179 Nitrosomonas sp. AL212 alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen YP_004295169.1 2153586 R 153948 CDS YP_004295170.1 325982768 10298713 complement(2154091..2155623) 1 NC_015222.1 SMART: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type; KEGG: net:Neut_1244 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; 2-isopropylmalate synthase 2155623 10298713 NAL212_2180 Nitrosomonas sp. AL212 2-isopropylmalate synthase YP_004295170.1 2154091 R 153948 CDS YP_004295171.1 325982769 10298714 complement(2155854..2156627) 1 NC_015222.1 KEGG: net:Neut_1258 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase 2156627 10298714 NAL212_2181 Nitrosomonas sp. AL212 CDP-diacylglycerol/serine O-phosphatidyltransferase YP_004295171.1 2155854 R 153948 CDS YP_004295172.1 325982770 10298715 complement(2156781..2157431) 1 NC_015222.1 TIGRFAM: Phosphatidylserine decarboxylase-related protein; KEGG: neu:NE1322 phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase-like protein 2157431 10298715 NAL212_2182 Nitrosomonas sp. AL212 phosphatidylserine decarboxylase-like protein YP_004295172.1 2156781 R 153948 CDS YP_004295173.1 325982771 10298716 complement(2157495..2158511) 1 NC_015222.1 TIGRFAM: Acetohydroxy acid isomeroreductase; KEGG: nmu:Nmul_A0472 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal; ketol-acid reductoisomerase 2158511 10298716 NAL212_2183 Nitrosomonas sp. AL212 ketol-acid reductoisomerase YP_004295173.1 2157495 R 153948 CDS YP_004295174.1 325982772 10298717 complement(2158627..2159118) 1 NC_015222.1 manually curated; TIGRFAM: Acetolactate synthase, small subunit; KEGG: nmu:Nmul_A0473 acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; acetolactate synthase small subunit 2159118 10298717 NAL212_2184 Nitrosomonas sp. AL212 acetolactate synthase small subunit YP_004295174.1 2158627 R 153948 CDS YP_004295175.1 325982773 10298718 complement(2159126..2160829) 1 NC_015222.1 TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: nmu:Nmul_A0474 acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central domain; acetolactate synthase large subunit, biosynthetic type 2160829 10298718 NAL212_2185 Nitrosomonas sp. AL212 acetolactate synthase large subunit, biosynthetic type YP_004295175.1 2159126 R 153948 CDS YP_004295176.1 325982774 10298719 complement(2160899..2162374) 1 NC_015222.1 PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: nmu:Nmul_A1055 peptidase U62, modulator of DNA gyrase; peptidase U62 modulator of DNA gyrase 2162374 10298719 NAL212_2186 Nitrosomonas sp. AL212 peptidase U62 modulator of DNA gyrase YP_004295176.1 2160899 R 153948 CDS YP_004295177.1 325982775 10298720 complement(2162454..2163284) 1 NC_015222.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: neu:NE1327 carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2163284 10298720 NAL212_2187 Nitrosomonas sp. AL212 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004295177.1 2162454 R 153948 CDS YP_004295178.1 325982776 10298721 complement(2163281..2163442) 1 NC_015222.1 KEGG: ngr:NAEGRDRAFT_45689 hypothetical protein; hypothetical protein 2163442 10298721 NAL212_2188 Nitrosomonas sp. AL212 hypothetical protein YP_004295178.1 2163281 R 153948 CDS YP_004295179.1 325982777 10298722 2163556..2166348 1 NC_015222.1 KEGG: neu:NE1329 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; PFAM: Glutamate-ammonia ligase adenylyltransferase, repeated domain; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 2166348 10298722 NAL212_2189 Nitrosomonas sp. AL212 (glutamate--ammonia-ligase) adenylyltransferase YP_004295179.1 2163556 D 153948 CDS YP_004295180.1 325982778 10298723 2166532..2166981 1 NC_015222.1 KEGG: gca:Galf_2551 pilus biogenesis protein TapA precursor, putative; pilus biogenesis protein TapA 2166981 10298723 NAL212_2190 Nitrosomonas sp. AL212 pilus biogenesis protein TapA YP_004295180.1 2166532 D 153948 CDS YP_004295181.1 325982779 10298725 complement(2167426..2169807) 1 NC_015222.1 KEGG: net:Neut_2128 putative GAF sensor protein; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; GAF; SMART: GAF; ATPase, AAA+ type, core; putative phytochrome sensor protein 2169807 10298725 NAL212_2192 Nitrosomonas sp. AL212 putative phytochrome sensor protein YP_004295181.1 2167426 R 153948 CDS YP_004295182.1 325982780 10298726 complement(2169819..2170583) 1 NC_015222.1 KEGG: neu:NE2291 cAMP phosphodiesterase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; cyclic-AMP phosphodiesterase 2170583 10298726 NAL212_2193 Nitrosomonas sp. AL212 cyclic-AMP phosphodiesterase YP_004295182.1 2169819 R 153948 CDS YP_004295183.1 325982781 10298727 complement(2170605..2171030) 1 NC_015222.1 PFAM: UspA; KEGG: net:Neut_2130 UspA domain-containing protein; UspA domain-containing protein 2171030 10298727 NAL212_2194 Nitrosomonas sp. AL212 UspA domain-containing protein YP_004295183.1 2170605 R 153948 CDS YP_004295184.1 325982782 10298728 complement(2171064..2171786) 1 NC_015222.1 KEGG: nmu:Nmul_A2473 integral membrane protein TerC; TIGRFAM: Integral membrane protein YjbE; PFAM: Integral membrane protein TerC; YjbE family integral membrane protein 2171786 10298728 NAL212_2195 Nitrosomonas sp. AL212 YjbE family integral membrane protein YP_004295184.1 2171064 R 153948 CDS YP_004295185.1 325982783 10298729 complement(2171830..2173014) 1 NC_015222.1 PFAM: Patatin/Phospholipase A2-related; KEGG: neu:NE2294 patatin; patatin 2173014 10298729 NAL212_2196 Nitrosomonas sp. AL212 patatin YP_004295185.1 2171830 R 153948 CDS YP_004295186.1 325982784 10298730 complement(2173007..2173264) 1 NC_015222.1 KEGG: mfa:Mfla_1629 hypothetical protein; hypothetical protein 2173264 10298730 NAL212_2197 Nitrosomonas sp. AL212 hypothetical protein YP_004295186.1 2173007 R 153948 CDS YP_004295187.1 325982785 10298731 2173425..2174387 1 NC_015222.1 KEGG: neu:NE2295 prolyl aminopeptidase; TIGRFAM: Peptidase S33, proline iminopeptidase 1; PFAM: Alpha/beta hydrolase fold-1; proline iminopeptidase 2174387 10298731 NAL212_2198 Nitrosomonas sp. AL212 proline iminopeptidase YP_004295187.1 2173425 D 153948 CDS YP_004295188.1 325982786 10298732 complement(2174434..2175150) 1 NC_015222.1 KEGG: hch:HCH_04016 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PapS reductase)/FAD synthetase and related enzyme; PFAM: Phosphoadenosine phosphosulphate reductase; phosphoadenylyl-sulfate reductase (thioredoxin) 2175150 10298732 NAL212_2199 Nitrosomonas sp. AL212 phosphoadenylyl-sulfate reductase (thioredoxin) YP_004295188.1 2174434 R 153948 CDS YP_004295189.1 325982787 10298733 2175562..2176077 1 NC_015222.1 KEGG: vcn:VOLCADRAFT_88465 hypothetical protein; hypothetical protein 2176077 10298733 NAL212_2200 Nitrosomonas sp. AL212 hypothetical protein YP_004295189.1 2175562 D 153948 CDS YP_004295190.1 325982788 10298734 2176438..2176980 1 NC_015222.1 PFAM: Protein of unknown function DUF785; KEGG: psp:PSPPH_2054 hypothetical protein; hypothetical protein 2176980 10298734 NAL212_2201 Nitrosomonas sp. AL212 hypothetical protein YP_004295190.1 2176438 D 153948 CDS YP_004295191.1 325982789 10298735 2177155..2177703 1 NC_015222.1 KEGG: net:Neut_1560 transcription elongation factor GreB; TIGRFAM: Transcription elongation factor GreB; PFAM: Transcription elongation factor, GreA/GreB, N-terminal; Transcription elongation factor, GreA/GreB, C-terminal; transcription elongation factor GreB 2177703 10298735 NAL212_2202 Nitrosomonas sp. AL212 transcription elongation factor GreB YP_004295191.1 2177155 D 153948 CDS YP_004295192.1 325982790 10298736 complement(2177842..2178843) 1 NC_015222.1 TIGRFAM: PEP-CTERM anchor; PFAM: von Willebrand factor, type A; PEP-CTERM bacterial; KEGG: rde:RD1_B0031 von Willebrand factor type A domain-containing protein; SMART: von Willebrand factor, type A; PEP motif putative anchor domain-containing protein 2178843 10298736 NAL212_2203 Nitrosomonas sp. AL212 PEP motif putative anchor domain-containing protein YP_004295192.1 2177842 R 153948 CDS YP_004295193.1 325982791 10298737 complement(2179268..2180140) 1 NC_015222.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphate transport system permease protein 1; KEGG: gca:Galf_2284 phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter-like; phosphate ABC transporter ATPase 2180140 10298737 NAL212_2204 Nitrosomonas sp. AL212 phosphate ABC transporter ATPase YP_004295193.1 2179268 R 153948 CDS YP_004295194.1 325982792 10298738 complement(2180209..2181054) 1 NC_015222.1 KEGG: gca:Galf_2283 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 2181054 10298738 NAL212_2205 Nitrosomonas sp. AL212 phosphate ABC transporter permease YP_004295194.1 2180209 R 153948 CDS YP_004295195.1 325982793 10298739 complement(2181063..2182025) 1 NC_015222.1 KEGG: slt:Slit_1066 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: Phosphate ABC transporter, permease protein PstC; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 2182025 10298739 NAL212_2206 Nitrosomonas sp. AL212 phosphate ABC transporter permease YP_004295195.1 2181063 R 153948 CDS YP_004295196.1 325982794 10298740 complement(2182074..2183123) 1 NC_015222.1 KEGG: meh:M301_1986 phosphate ABC transporter, periplasmic phosphate-binding protein; TIGRFAM: Periplasmic phosphate binding protein; PFAM: Bacterial extracellular solute-binding, family 1; phosphate ABC transporter substrate-binding protein 2183123 10298740 NAL212_2207 Nitrosomonas sp. AL212 phosphate ABC transporter substrate-binding protein YP_004295196.1 2182074 R 153948 CDS YP_004295197.1 325982795 10298741 complement(2183581..2183844) 1 NC_015222.1 KEGG: soz:Spy49_1022 conserved hypothetical protein, possible permease; hypothetical protein 2183844 10298741 NAL212_2208 Nitrosomonas sp. AL212 hypothetical protein YP_004295197.1 2183581 R 153948 CDS YP_004295198.1 325982796 10298742 complement(2183876..2185201) 1 NC_015222.1 PFAM: Protein of unknown function DUF839; KEGG: tbd:Tbd_1423 putative phosphatase; hypothetical protein 2185201 10298742 NAL212_2209 Nitrosomonas sp. AL212 hypothetical protein YP_004295198.1 2183876 R 153948 CDS YP_004295199.1 325982797 10298743 complement(2185540..2187138) 1 NC_015222.1 KEGG: nhl:Nhal_3832 hypothetical protein; hypothetical protein 2187138 10298743 NAL212_2210 Nitrosomonas sp. AL212 hypothetical protein YP_004295199.1 2185540 R 153948 CDS YP_004295200.1 325982798 10298744 complement(2187307..2188230) 1 NC_015222.1 PFAM: Bile acid:sodium symporter; KEGG: nmu:Nmul_A1633 bile acid:sodium symporter; bile acid:sodium symporter 2188230 10298744 NAL212_2211 Nitrosomonas sp. AL212 bile acid:sodium symporter YP_004295200.1 2187307 R 153948 CDS YP_004295201.1 325982799 10298745 complement(2188380..2189534) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region; integrase catalytic region 2189534 10298745 NAL212_2212 Nitrosomonas sp. AL212 integrase catalytic region YP_004295201.1 2188380 R 153948 CDS YP_004295202.1 325982800 10298746 complement(2189819..2191807) 1 NC_015222.1 KEGG: syf:Synpcc7942_1337 integrins alpha chain; PFAM: FG-GAP; Haemolysin-type calcium-binding repeat; SMART: Integrin alpha beta-propellor; FG-GAP repeat-containing protein 2191807 10298746 NAL212_2213 Nitrosomonas sp. AL212 FG-GAP repeat-containing protein YP_004295202.1 2189819 R 153948 CDS YP_004295203.1 325982801 10298747 complement(2192173..2192295) 1 NC_015222.1 hypothetical protein 2192295 10298747 NAL212_2214 Nitrosomonas sp. AL212 hypothetical protein YP_004295203.1 2192173 R 153948 CDS YP_004295204.1 325982802 10298748 complement(2192308..2195490) 1 NC_015222.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: nhl:Nhal_3833 TonB-dependent receptor; TonB-dependent receptor 2195490 10298748 NAL212_2215 Nitrosomonas sp. AL212 TonB-dependent receptor YP_004295204.1 2192308 R 153948 CDS YP_004295205.1 325982803 10298749 complement(2195613..2196788) 1 NC_015222.1 KEGG: nhl:Nhal_3834 tetratricopeptide domain protein; hypothetical protein 2196788 10298749 NAL212_2216 Nitrosomonas sp. AL212 hypothetical protein YP_004295205.1 2195613 R 153948 CDS YP_004295206.1 325982804 10298750 complement(2196797..2197417) 1 NC_015222.1 KEGG: nhl:Nhal_3835 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal; TonB family protein 2197417 10298750 NAL212_2217 Nitrosomonas sp. AL212 TonB family protein YP_004295206.1 2196797 R 153948 CDS YP_004295207.1 325982805 10298751 complement(2197438..2197842) 1 NC_015222.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: nhl:Nhal_3836 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 2197842 10298751 NAL212_2218 Nitrosomonas sp. AL212 biopolymer transport protein ExbD/TolR YP_004295207.1 2197438 R 153948 CDS YP_004295208.1 325982806 10298752 complement(2197839..2198468) 1 NC_015222.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: nhl:Nhal_3837 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 2198468 10298752 NAL212_2219 Nitrosomonas sp. AL212 MotA/TolQ/ExbB proton channel YP_004295208.1 2197839 R 153948 CDS YP_004295209.1 325982807 10298753 complement(2198470..2199963) 1 NC_015222.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: nhl:Nhal_3838 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 2199963 10298753 NAL212_2220 Nitrosomonas sp. AL212 MotA/TolQ/ExbB proton channel YP_004295209.1 2198470 R 153948 CDS YP_004295210.1 325982808 10298754 complement(2199960..2200754) 1 NC_015222.1 KEGG: nhl:Nhal_3839 hypothetical protein; hypothetical protein 2200754 10298754 NAL212_2221 Nitrosomonas sp. AL212 hypothetical protein YP_004295210.1 2199960 R 153948 CDS YP_004295211.1 325982809 10298755 complement(2201421..2202125) 1 NC_015222.1 KEGG: mex:Mext_2992 hypothetical protein; hypothetical protein 2202125 10298755 NAL212_2222 Nitrosomonas sp. AL212 hypothetical protein YP_004295211.1 2201421 R 153948 CDS YP_004295212.1 325982810 10298756 complement(2202355..2203869) 1 NC_015222.1 PFAM: Sulphate transporter; KEGG: mei:Msip34_0561 sulphate transporter; sulfate transporter 2203869 10298756 NAL212_2223 Nitrosomonas sp. AL212 sulfate transporter YP_004295212.1 2202355 R 153948 CDS YP_004295213.1 325982811 10298757 2204097..2205434 1 NC_015222.1 PFAM: Protein of unknown function DUF2254, membrane; KEGG: sbl:Sbal_1905 membrane protein; hypothetical protein 2205434 10298757 NAL212_2224 Nitrosomonas sp. AL212 hypothetical protein YP_004295213.1 2204097 D 153948 CDS YP_004295214.1 325982812 10298758 complement(2205518..2205991) 1 NC_015222.1 KEGG: neu:NE1199 hypothetical protein; hypothetical protein 2205991 10298758 NAL212_2225 Nitrosomonas sp. AL212 hypothetical protein YP_004295214.1 2205518 R 153948 CDS YP_004295215.1 325982813 10298759 2206198..2207112 1 NC_015222.1 KEGG: nmu:Nmul_A0637 hypothetical protein; PFAM: SH3, type 3; SMART: SH3-like domain, bacterial; SH3 type 3 domain-containing protein 2207112 10298759 NAL212_2226 Nitrosomonas sp. AL212 SH3 type 3 domain-containing protein YP_004295215.1 2206198 D 153948 CDS YP_004295216.1 325982814 10298760 complement(2207115..2208791) 1 NC_015222.1 SMART: Diguanylate cyclase, predicted; HAMP linker domain; TIGRFAM: Diguanylate cyclase, predicted; KEGG: nmu:Nmul_A0638 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; HAMP linker domain; diguanylate cyclase 2208791 10298760 NAL212_2227 Nitrosomonas sp. AL212 diguanylate cyclase YP_004295216.1 2207115 R 153948 CDS YP_004295217.1 325982815 10298761 complement(2208819..2209244) 1 NC_015222.1 PFAM: Globin, truncated bacterial-like; KEGG: net:Neut_1441 putative sec-independent protein translocase protein TatC; globin 2209244 10298761 NAL212_2228 Nitrosomonas sp. AL212 globin YP_004295217.1 2208819 R 153948 CDS YP_004295218.1 325982816 10298762 2209641..2211251 1 NC_015222.1 KEGG: net:Neut_0596 malate dehydrogenase; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; SMART: Malic enzyme, NAD-binding; malic protein NAD-binding protein 2211251 10298762 NAL212_2229 Nitrosomonas sp. AL212 malic protein NAD-binding protein YP_004295218.1 2209641 D 153948 CDS YP_004295219.1 325982817 10298763 complement(2211282..2212112) 1 NC_015222.1 TIGRFAM: Phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: nmu:Nmul_A0636 phosphoserine phosphatase SerB; PFAM: Haloacid dehalogenase-like hydrolase; phosphoserine phosphatase SerB 2212112 10298763 NAL212_2230 Nitrosomonas sp. AL212 phosphoserine phosphatase SerB YP_004295219.1 2211282 R 153948 CDS YP_004295220.1 325982818 10298764 complement(2212125..2213588) 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Metal-dependent hydrolase HDOD; KEGG: neu:NE0440 domain of unknown function, DUF9; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 2213588 10298764 NAL212_2231 Nitrosomonas sp. AL212 diguanylate cyclase YP_004295220.1 2212125 R 153948 CDS YP_004295221.1 325982819 10298765 2213895..2215391 1 NC_015222.1 HAMAP: Peptidase, M17, probable cytosol aminopeptidase; KEGG: neu:NE0441 leucyl aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal; cytosol aminopeptidase 2215391 10298765 NAL212_2232 Nitrosomonas sp. AL212 cytosol aminopeptidase YP_004295221.1 2213895 D 153948 CDS YP_004295222.1 325982820 10298766 2215388..2215867 1 NC_015222.1 PFAM: DNA polymerase III chi subunit, HolC; KEGG: nmu:Nmul_A0745 DNA polymerase III chi subunit, HolC; DNA polymerase III chi subunit HolC 2215867 10298766 NAL212_2233 Nitrosomonas sp. AL212 DNA polymerase III chi subunit HolC YP_004295222.1 2215388 D 153948 CDS YP_004295223.1 325982821 10298767 2215885..2216244 1 NC_015222.1 KEGG: neu:NE0443 hypothetical protein; hypothetical protein 2216244 10298767 NAL212_2234 Nitrosomonas sp. AL212 hypothetical protein YP_004295223.1 2215885 D 153948 CDS YP_004295224.1 325982822 10298768 2216399..2219161 1 NC_015222.1 TIGRFAM: Valyl-tRNA synthetase; KEGG: neu:NE0444 valyl-tRNA synthetase; valyl-tRNA synthetase 2219161 10298768 NAL212_2235 Nitrosomonas sp. AL212 valyl-tRNA synthetase YP_004295224.1 2216399 D 153948 CDS YP_004295225.1 325982823 10298769 complement(2219458..2220090) 1 NC_015222.1 KEGG: net:Neut_1839 two component transcriptional regulator, LuxR family protein; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; two component transcriptional regulator, LuxR family 2220090 10298769 NAL212_2236 Nitrosomonas sp. AL212 two component transcriptional regulator, LuxR family YP_004295225.1 2219458 R 153948 CDS YP_004295226.1 325982824 10298771 2221584..2223200 1 NC_015222.1 KEGG: amr:AM1_6172 IS5 family transposase; IS5 family transposase 2223200 10298771 NAL212_2238 Nitrosomonas sp. AL212 IS5 family transposase YP_004295226.1 2221584 D 153948 CDS YP_004295227.1 325982825 10298772 complement(2223165..2223476) 1 NC_015222.1 KEGG: gsu:GSU0010 sensory box histidine kinase/response regulator; hypothetical protein 2223476 10298772 NAL212_2239 Nitrosomonas sp. AL212 hypothetical protein YP_004295227.1 2223165 R 153948 CDS YP_004295228.1 325982826 10298773 2223830..2225539 1 NC_015222.1 PFAM: Flagellin, D0/D1 domain; Flagellin hook, IN motif; KEGG: azo:azo2704 flagellin; flagellin domain-containing protein 2225539 10298773 NAL212_2240 Nitrosomonas sp. AL212 flagellin domain-containing protein YP_004295228.1 2223830 D 153948 CDS YP_004295229.1 325982827 10298774 2225624..2225992 1 NC_015222.1 PFAM: Flagellar protein FlaG protein; KEGG: neu:NE1594 hypothetical protein; flagellar protein FlaG protein 2225992 10298774 NAL212_2241 Nitrosomonas sp. AL212 flagellar protein FlaG protein YP_004295229.1 2225624 D 153948 CDS YP_004295230.1 325982828 10298775 2226032..2227462 1 NC_015222.1 PFAM: Flagellar hook-associated 2, C-terminal; Flagellar hook-associated protein 2, N-terminal; KEGG: neu:NE1595 flagellar hook-associated protein 2; flagellar hook-associated 2 domain-containing protein 2227462 10298775 NAL212_2242 Nitrosomonas sp. AL212 flagellar hook-associated 2 domain-containing protein YP_004295230.1 2226032 D 153948 CDS YP_004295231.1 325982829 10298776 2227495..2227920 1 NC_015222.1 KEGG: neu:NE1596 flagellar protein FliS; TIGRFAM: Flagellar protein FliS; PFAM: Flagellar protein FliS; flagellar protein FliS 2227920 10298776 NAL212_2243 Nitrosomonas sp. AL212 flagellar protein FliS YP_004295231.1 2227495 D 153948 CDS YP_004295232.1 325982830 10298777 2227957..2228292 1 NC_015222.1 PFAM: Flagellar export chaperone, FliT; KEGG: neu:NE1597 hypothetical protein; flagellar export chaperone 2228292 10298777 NAL212_2244 Nitrosomonas sp. AL212 flagellar export chaperone YP_004295232.1 2227957 D 153948 CDS YP_004295233.1 325982831 10298778 2228361..2229389 1 NC_015222.1 KEGG: net:Neut_0751 hypothetical protein; hypothetical protein 2229389 10298778 NAL212_2245 Nitrosomonas sp. AL212 hypothetical protein YP_004295233.1 2228361 D 153948 CDS YP_004295234.1 325982832 10298779 2229376..2229705 1 NC_015222.1 PFAM: Type III secretion exporter; KEGG: neu:NE2078 flagellar biosynthetic protein; type III secretion exporter 2229705 10298779 NAL212_2246 Nitrosomonas sp. AL212 type III secretion exporter YP_004295234.1 2229376 D 153948 CDS YP_004295235.1 325982833 10298780 2229708..2230493 1 NC_015222.1 PFAM: YcgR; Type IV pilus assembly PilZ; KEGG: neu:NE2079 hypothetical protein; YcgR family protein 2230493 10298780 NAL212_2247 Nitrosomonas sp. AL212 YcgR family protein YP_004295235.1 2229708 D 153948 CDS YP_004295236.1 325982834 10298784 2232089..2233618 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: swi:Swit_4958 transposase; integrase catalytic region 2233618 10298784 NAL212_2251 Nitrosomonas sp. AL212 integrase catalytic region YP_004295236.1 2232089 D 153948 CDS YP_004295237.1 325982835 10298785 2233611..2234432 1 NC_015222.1 KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 2234432 10298785 NAL212_2252 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004295237.1 2233611 D 153948 CDS YP_004295238.1 325982836 10298786 complement(2234615..2234962) 1 NC_015222.1 PFAM: YCII-related; KEGG: pfl:PFL_4564 DGPF domain-containing protein; hypothetical protein 2234962 10298786 NAL212_2253 Nitrosomonas sp. AL212 hypothetical protein YP_004295238.1 2234615 R 153948 CDS YP_004295239.1 325982837 10298787 complement(2234998..2235372) 1 NC_015222.1 PFAM: YCII-related; KEGG: hch:HCH_05597 hypothetical protein; hypothetical protein 2235372 10298787 NAL212_2254 Nitrosomonas sp. AL212 hypothetical protein YP_004295239.1 2234998 R 153948 CDS YP_004295240.1 325982838 10298788 complement(2235451..2236704) 1 NC_015222.1 KEGG: nde:NIDE3487 putative RNA polymerase ECF-type sigma factor containing TPR repeat; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; putative ECF subfamily RNA polymerase sigma-24 subunit 2236704 10298788 NAL212_2255 Nitrosomonas sp. AL212 putative ECF subfamily RNA polymerase sigma-24 subunit YP_004295240.1 2235451 R 153948 CDS YP_004295241.1 325982839 10298789 2237112..2237210 1 NC_015222.1 hypothetical protein 2237210 10298789 NAL212_2256 Nitrosomonas sp. AL212 hypothetical protein YP_004295241.1 2237112 D 153948 CDS YP_004295242.1 325982840 10298790 2238127..2239290 1 NC_015222.1 PFAM: Glycoside hydrolase, family 42, N-terminal; KEGG: nde:NIDE1370 hypothetical protein; glycoside hydrolase family protein 2239290 10298790 NAL212_2257 Nitrosomonas sp. AL212 glycoside hydrolase family protein YP_004295242.1 2238127 D 153948 CDS YP_004295243.1 325982841 10298791 2239328..2239507 1 NC_015222.1 hypothetical protein 2239507 10298791 NAL212_2258 Nitrosomonas sp. AL212 hypothetical protein YP_004295243.1 2239328 D 153948 CDS YP_004295244.1 325982842 10298792 2239923..2241083 1 NC_015222.1 KEGG: nde:NIDE1370 hypothetical protein; hypothetical protein 2241083 10298792 NAL212_2259 Nitrosomonas sp. AL212 hypothetical protein YP_004295244.1 2239923 D 153948 CDS YP_004295245.1 325982843 10298793 2241748..2242911 1 NC_015222.1 KEGG: nde:NIDE1370 hypothetical protein; hypothetical protein 2242911 10298793 NAL212_2260 Nitrosomonas sp. AL212 hypothetical protein YP_004295245.1 2241748 D 153948 CDS YP_004295246.1 325982844 10298794 complement(2243175..2244905) 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold-4; Diguanylate cyclase, predicted; KEGG: tjr:TherJR_1729 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2244905 10298794 NAL212_2261 Nitrosomonas sp. AL212 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004295246.1 2243175 R 153948 CDS YP_004295247.1 325982845 10298795 complement(2245151..2245570) 1 NC_015222.1 PFAM: Peptide chain release factor class I/class II; KEGG: sde:Sde_3201 hypothetical protein; class I peptide chain release factor 2245570 10298795 NAL212_2262 Nitrosomonas sp. AL212 class I peptide chain release factor YP_004295247.1 2245151 R 153948 CDS YP_004295248.1 325982846 10298796 2245848..2247497 1 NC_015222.1 KEGG: cja:CJA_3640 type I restriction-modification system specificity subunit; PFAM: DNA methylase, adenine-specific; N6 adenine-specific DNA methyltransferase, N12 class, N-terminal; adenine-specific DNA-methyltransferase 2247497 10298796 NAL212_2263 Nitrosomonas sp. AL212 adenine-specific DNA-methyltransferase YP_004295248.1 2245848 D 153948 CDS YP_004295249.1 325982847 10298797 2247494..2248693 1 NC_015222.1 PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: mpt:Mpe_A0006 restriction modification system, type I; restriction modification system DNA specificity domain 2248693 10298797 NAL212_2264 Nitrosomonas sp. AL212 restriction modification system DNA specificity domain YP_004295249.1 2247494 D 153948 CDS YP_004295250.1 325982848 10298798 2248741..2249268 1 NC_015222.1 KEGG: hap:HAPS_0834 hypothetical protein; hypothetical protein 2249268 10298798 NAL212_2265 Nitrosomonas sp. AL212 hypothetical protein YP_004295250.1 2248741 D 153948 CDS YP_004295251.1 325982849 10298799 2249347..2249541 1 NC_015222.1 PFAM: Protein of unknown function DUF2191; KEGG: xau:Xaut_3924 hypothetical protein; hypothetical protein 2249541 10298799 NAL212_2266 Nitrosomonas sp. AL212 hypothetical protein YP_004295251.1 2249347 D 153948 CDS YP_004295252.1 325982850 10298800 2249550..2249924 1 NC_015222.1 PFAM: PilT protein, N-terminal; KEGG: sjp:SJA_C1-29410 putative nucleic-acid-binding protein; PilT protein domain-containing protein 2249924 10298800 NAL212_2267 Nitrosomonas sp. AL212 PilT protein domain-containing protein YP_004295252.1 2249550 D 153948 CDS YP_004295253.1 325982851 10298802 2252935..2253255 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2253255 10298802 NAL212_2269 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004295253.1 2252935 D 153948 CDS YP_004295254.1 325982852 10298803 2253255..2254154 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit; integrase catalytic region 2254154 10298803 NAL212_2270 Nitrosomonas sp. AL212 integrase catalytic region YP_004295254.1 2253255 D 153948 CDS YP_004295255.1 325982853 10298804 complement(2254494..2255372) 1 NC_015222.1 PFAM: Domain of unknown function DUF88; KEGG: neu:NE0665 hypothetical protein; hypothetical protein 2255372 10298804 NAL212_2271 Nitrosomonas sp. AL212 hypothetical protein YP_004295255.1 2254494 R 153948 CDS YP_004295256.1 325982854 10298805 2255545..2256831 1 NC_015222.1 KEGG: neu:NE2199 flavin-containing monooxygenase (FMO); PFAM: Flavin-containing monooxygenase-like; flavin-containing monooxygenase 2256831 10298805 NAL212_2272 Nitrosomonas sp. AL212 flavin-containing monooxygenase YP_004295256.1 2255545 D 153948 CDS YP_004295257.1 325982855 10298806 2256926..2258407 1 NC_015222.1 PFAM: Uncharacterised protein family UPF0061; KEGG: pca:Pcar_0297 hypothetical protein; hypothetical protein 2258407 10298806 NAL212_2273 Nitrosomonas sp. AL212 hypothetical protein YP_004295257.1 2256926 D 153948 CDS YP_004295258.1 325982856 10298807 2258446..2258829 1 NC_015222.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nmu:Nmul_A1593 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2258829 10298807 NAL212_2274 Nitrosomonas sp. AL212 glyoxalase/bleomycin resistance protein/dioxygenase YP_004295258.1 2258446 D 153948 CDS YP_004295259.1 325982857 10298808 2258876..2259514 1 NC_015222.1 KEGG: tau:Tola_1511 hypothetical protein; hypothetical protein 2259514 10298808 NAL212_2275 Nitrosomonas sp. AL212 hypothetical protein YP_004295259.1 2258876 D 153948 CDS YP_004295260.1 325982858 10298809 2259519..2260019 1 NC_015222.1 PFAM: Polyketide cyclase/dehydrase; KEGG: bph:Bphy_5310 hypothetical protein; polyketide cyclase/dehydrase 2260019 10298809 NAL212_2276 Nitrosomonas sp. AL212 polyketide cyclase/dehydrase YP_004295260.1 2259519 D 153948 CDS YP_004295261.1 325982859 10298810 complement(2260048..2260233) 1 NC_015222.1 PFAM: Protein of unknown function DUF3330; KEGG: nhl:Nhal_3036 hypothetical protein; hypothetical protein 2260233 10298810 NAL212_2277 Nitrosomonas sp. AL212 hypothetical protein YP_004295261.1 2260048 R 153948 CDS YP_004295262.1 325982860 10298811 complement(2260310..2260855) 1 NC_015222.1 KEGG: neu:NE0083 hypothetical protein; hypothetical protein 2260855 10298811 NAL212_2278 Nitrosomonas sp. AL212 hypothetical protein YP_004295262.1 2260310 R 153948 CDS YP_004295263.1 325982861 10298812 complement(2260871..2261299) 1 NC_015222.1 KEGG: nmu:Nmul_A0147 hypothetical protein; hypothetical protein 2261299 10298812 NAL212_2279 Nitrosomonas sp. AL212 hypothetical protein YP_004295263.1 2260871 R 153948 CDS YP_004295264.1 325982862 10298813 complement(2261454..2262071) 1 NC_015222.1 KEGG: meh:M301_1663 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; two component transcriptional regulator, LuxR family 2262071 10298813 NAL212_2280 Nitrosomonas sp. AL212 two component transcriptional regulator, LuxR family YP_004295264.1 2261454 R 153948 CDS YP_004295265.1 325982863 10298814 complement(2262068..2263564) 1 NC_015222.1 TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: meh:M301_1662 PAS/PAC sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS/PAC sensor signal transduction histidine kinase 2263564 10298814 NAL212_2281 Nitrosomonas sp. AL212 PAS/PAC sensor signal transduction histidine kinase YP_004295265.1 2262068 R 153948 CDS YP_004295266.1 325982864 10298815 2263884..2264126 1 NC_015222.1 KEGG: ngr:NAEGRDRAFT_78100 CAP_ED domain-containing protein; hypothetical protein 2264126 10298815 NAL212_2282 Nitrosomonas sp. AL212 hypothetical protein YP_004295266.1 2263884 D 153948 CDS YP_004295267.1 325982865 10298816 2264129..2265121 1 NC_015222.1 PFAM: Protein of unknown function DUF897; KEGG: rce:RC1_1255 hypothetical protein; hypothetical protein 2265121 10298816 NAL212_2283 Nitrosomonas sp. AL212 hypothetical protein YP_004295267.1 2264129 D 153948 CDS YP_004295268.1 325982866 10298817 2265368..2265685 1 NC_015222.1 KEGG: tal:Thal_0656 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 2265685 10298817 NAL212_2284 Nitrosomonas sp. AL212 nitrogen regulatory protein P-II YP_004295268.1 2265368 D 153948 CDS YP_004295269.1 325982867 10298818 2266002..2266175 1 NC_015222.1 KEGG: nmu:Nmul_A0029 hypothetical protein; hypothetical protein 2266175 10298818 NAL212_2285 Nitrosomonas sp. AL212 hypothetical protein YP_004295269.1 2266002 D 153948 CDS YP_004295270.1 325982868 10298819 complement(2266182..2266670) 1 NC_015222.1 TIGRFAM: Peptidase A8, signal peptidase II; KEGG: nmu:Nmul_A2655 lipoprotein signal peptidase; PFAM: Peptidase A8, signal peptidase II; lipoprotein signal peptidase 2266670 10298819 NAL212_2286 Nitrosomonas sp. AL212 lipoprotein signal peptidase YP_004295270.1 2266182 R 153948 CDS YP_004295271.1 325982869 10298820 complement(2266704..2269502) 1 NC_015222.1 TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; KEGG: net:Neut_1439 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 2269502 10298820 NAL212_2287 Nitrosomonas sp. AL212 isoleucyl-tRNA synthetase YP_004295271.1 2266704 R 153948 CDS YP_004295272.1 325982870 10298821 complement(2269521..2270489) 1 NC_015222.1 SMART: Riboflavin kinase; TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: nmu:Nmul_A2653 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; riboflavin biosynthesis protein RibF 2270489 10298821 NAL212_2288 Nitrosomonas sp. AL212 riboflavin biosynthesis protein RibF YP_004295272.1 2269521 R 153948 CDS YP_004295273.1 325982871 10298822 2270894..2271829 1 NC_015222.1 KEGG: alv:Alvin_2929 hemolysin-type calcium-binding region; hemolysin-type calcium-binding region 2271829 10298822 NAL212_2289 Nitrosomonas sp. AL212 hemolysin-type calcium-binding region YP_004295273.1 2270894 D 153948 CDS YP_004295274.1 325982872 10298823 2272129..2274243 1 NC_015222.1 PFAM: Sulphatase-modifying factor; Methyltransferase type 11; KEGG: net:Neut_0838 hypothetical protein; sulfatase-modifying factor protein 2274243 10298823 NAL212_2290 Nitrosomonas sp. AL212 sulfatase-modifying factor protein YP_004295274.1 2272129 D 153948 CDS YP_004295275.1 325982873 10298824 2274240..2275421 1 NC_015222.1 KEGG: nmu:Nmul_A2256 aminotransferase, class I and II; PFAM: Aminotransferase, class I/classII; cystathionine beta-lyase 2275421 10298824 NAL212_2291 Nitrosomonas sp. AL212 cystathionine beta-lyase YP_004295275.1 2274240 D 153948 CDS YP_004295276.1 325982874 10298825 2275593..2276795 1 NC_015222.1 KEGG: net:Neut_2234 succinyl-diaminopimelate desuccinylase; TIGRFAM: Succinyl-diaminopimelate desuccinylase, proteobacteria; PFAM: Peptidase M20; Peptidase M20, dimerisation; succinyl-diaminopimelate desuccinylase 2276795 10298825 NAL212_2292 Nitrosomonas sp. AL212 succinyl-diaminopimelate desuccinylase YP_004295276.1 2275593 D 153948 CDS YP_004295277.1 325982875 10298826 complement(2276864..2278186) 1 NC_015222.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Heat shock protein HslU; KEGG: net:Neut_0611 ATP-dependent protease ATP-binding subunit HslU; HAMAP: Heat shock protein HslU; PFAM: ATPase, AAA-2; ATP-dependent hsl protease ATP-binding subunit hslU 2278186 10298826 NAL212_2293 Nitrosomonas sp. AL212 ATP-dependent hsl protease ATP-binding subunit hslU YP_004295277.1 2276864 R 153948 CDS YP_004295278.1 325982876 10298827 complement(2278308..2278829) 1 NC_015222.1 KEGG: nmu:Nmul_A2545 ATP-dependent protease peptidase subunit; TIGRFAM: ATP-dependent protease, HslV subunit; PFAM: Proteasome, subunit alpha/beta; ATP-dependent protease HslVU, peptidase subunit 2278829 10298827 NAL212_2294 Nitrosomonas sp. AL212 ATP-dependent protease HslVU, peptidase subunit YP_004295278.1 2278308 R 153948 CDS YP_004295279.1 325982877 10298828 complement(2278909..2279802) 1 NC_015222.1 KEGG: mei:Msip34_0172 tyrosine recombinase XerC; TIGRFAM: Tyrosine recombinase XerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; tyrosine recombinase XerC 2279802 10298828 NAL212_2295 Nitrosomonas sp. AL212 tyrosine recombinase XerC YP_004295279.1 2278909 R 153948 CDS YP_004295280.1 325982878 10298829 complement(2279786..2280493) 1 NC_015222.1 PFAM: Protein of unknown function DUF484; KEGG: nmu:Nmul_A2543 hypothetical protein; hypothetical protein 2280493 10298829 NAL212_2296 Nitrosomonas sp. AL212 hypothetical protein YP_004295280.1 2279786 R 153948 CDS YP_004295281.1 325982879 10298830 complement(2280511..2281338) 1 NC_015222.1 TIGRFAM: Diaminopimelate epimerase; KEGG: nmu:Nmul_A2542 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; diaminopimelate epimerase 2281338 10298830 NAL212_2297 Nitrosomonas sp. AL212 diaminopimelate epimerase YP_004295281.1 2280511 R 153948 CDS YP_004295282.1 325982880 10298831 complement(2281342..2281866) 1 NC_015222.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: app:CAP2UW1_4174 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 2281866 10298831 NAL212_2298 Nitrosomonas sp. AL212 GCN5-like N-acetyltransferase YP_004295282.1 2281342 R 153948 CDS YP_004295283.1 325982881 10298832 complement(2282050..2282742) 1 NC_015222.1 PFAM: Copper chaperone SCO1/SenC; KEGG: pfo:Pfl01_2002 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 2282742 10298832 NAL212_2299 Nitrosomonas sp. AL212 electron transport protein SCO1/SenC YP_004295283.1 2282050 R 153948 CDS YP_004295284.1 325982882 10298833 complement(2282764..2284602) 1 NC_015222.1 KEGG: nde:NIDE3511 putative multicopper oxidase, type 2; PFAM: Multicopper oxidase, type 2; bilirubin oxidase 2284602 10298833 NAL212_2300 Nitrosomonas sp. AL212 bilirubin oxidase YP_004295284.1 2282764 R 153948 CDS YP_004295285.1 325982883 10298834 complement(2284745..2289664) 1 NC_015222.1 KEGG: lch:Lcho_2298 heme peroxidase; PFAM: Haem peroxidase, animal; Haemolysin-type calcium-binding repeat; Peptidase M10B, serralysin, C-terminal; peroxidase/Serralysin 2289664 10298834 NAL212_2301 Nitrosomonas sp. AL212 peroxidase/Serralysin YP_004295285.1 2284745 R 153948 CDS YP_004295286.1 325982884 10298835 complement(2290213..2290665) 1 NC_015222.1 PFAM: Uncharacterised protein family PGPGW, transmembrane; KEGG: nde:NIDE4159 hypothetical protein; hypothetical protein 2290665 10298835 NAL212_2302 Nitrosomonas sp. AL212 hypothetical protein YP_004295286.1 2290213 R 153948 CDS YP_004295287.1 325982885 10298836 complement(2290796..2291605) 1 NC_015222.1 KEGG: nmu:Nmul_A2766 ammonia monooxygenase/methane monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; methane monooxygenase/ammonia monooxygenase subunit C 2291605 10298836 NAL212_2303 Nitrosomonas sp. AL212 methane monooxygenase/ammonia monooxygenase subunit C YP_004295287.1 2290796 R 153948 CDS YP_004295288.1 325982886 10298837 2291966..2293687 1 NC_015222.1 PFAM: Phosphate-selective porin O/P; KEGG: nmu:Nmul_A2678 phosphate-selective porin O and P; phosphate-selective porin O and P 2293687 10298837 NAL212_2304 Nitrosomonas sp. AL212 phosphate-selective porin O and P YP_004295288.1 2291966 D 153948 CDS YP_004295289.1 325982887 10298838 2293871..2294887 1 NC_015222.1 TIGRFAM: Phosphate binding protein; KEGG: nmu:Nmul_A0486 phosphate binding protein; phosphate binding protein 2294887 10298838 NAL212_2305 Nitrosomonas sp. AL212 phosphate binding protein YP_004295289.1 2293871 D 153948 CDS YP_004295290.1 325982888 10298839 2295176..2296687 1 NC_015222.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: nmu:Nmul_A2332 binding-protein dependent transport system inner membrane protein; ABC transporter permease 2296687 10298839 NAL212_2306 Nitrosomonas sp. AL212 ABC transporter permease YP_004295290.1 2295176 D 153948 CDS YP_004295291.1 325982889 10298840 2296684..2298744 1 NC_015222.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: nmu:Nmul_A2331 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; peptide ABC transporter ATPase 2298744 10298840 NAL212_2307 Nitrosomonas sp. AL212 peptide ABC transporter ATPase YP_004295291.1 2296684 D 153948 CDS YP_004295292.1 325982890 10298841 2298749..2300359 1 NC_015222.1 KEGG: neu:NE2481 peptide chain release factor 3; TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; peptide chain release factor 3 2300359 10298841 NAL212_2308 Nitrosomonas sp. AL212 peptide chain release factor 3 YP_004295292.1 2298749 D 153948 CDS YP_004295293.1 325982891 10298842 2300371..2301438 1 NC_015222.1 KEGG: cps:CPS_1981 hypothetical protein; hypothetical protein 2301438 10298842 NAL212_2309 Nitrosomonas sp. AL212 hypothetical protein YP_004295293.1 2300371 D 153948 CDS YP_004295294.1 325982892 10298843 2301435..2302301 1 NC_015222.1 KEGG: nmu:Nmul_A0065 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: YicC-like, N-terminal; Domain of unknown function DUF1732; hypothetical protein 2302301 10298843 NAL212_2310 Nitrosomonas sp. AL212 hypothetical protein YP_004295294.1 2301435 D 153948 CDS YP_004295295.1 325982893 10298844 2302522..2302749 1 NC_015222.1 KEGG: nmu:Nmul_A1813 hypothetical protein; hypothetical protein 2302749 10298844 NAL212_2311 Nitrosomonas sp. AL212 hypothetical protein YP_004295295.1 2302522 D 153948 CDS YP_004295296.1 325982894 10298845 2302760..2304412 1 NC_015222.1 manually curated; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: slt:Slit_2634 multi-sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; integral membrane sensor signal transduction histidine kinase 2304412 10298845 NAL212_2312 Nitrosomonas sp. AL212 integral membrane sensor signal transduction histidine kinase YP_004295296.1 2302760 D 153948 CDS YP_004295297.1 325982895 10298846 2304403..2305839 1 NC_015222.1 KEGG: slt:Slit_2633 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; two component, sigma54 specific, transcriptional regulator, Fis family 2305839 10298846 NAL212_2313 Nitrosomonas sp. AL212 two component, sigma54 specific, transcriptional regulator, Fis family YP_004295297.1 2304403 D 153948 CDS YP_004295298.1 325982896 10298847 complement(2305967..2306545) 1 NC_015222.1 PFAM: Protein of unknown function DUF2780, VcgC/VcgE; KEGG: nhl:Nhal_3008 hypothetical protein; hypothetical protein 2306545 10298847 NAL212_2314 Nitrosomonas sp. AL212 hypothetical protein YP_004295298.1 2305967 R 153948 CDS YP_004295299.1 325982897 10298848 2306728..2306931 1 NC_015222.1 KEGG: ngr:NAEGRDRAFT_39225 hypothetical protein; hypothetical protein 2306931 10298848 NAL212_2315 Nitrosomonas sp. AL212 hypothetical protein YP_004295299.1 2306728 D 153948 CDS YP_004295300.1 325982898 10298849 2307093..2308139 1 NC_015222.1 KEGG: pin:Ping_1732 magnesium and cobalt transport protein CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; magnesium and cobalt transport protein CorA 2308139 10298849 NAL212_2316 Nitrosomonas sp. AL212 magnesium and cobalt transport protein CorA YP_004295300.1 2307093 D 153948 CDS YP_004295301.1 325982899 10298850 2308294..2309601 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase; transposase IS4 family protein 2309601 10298850 NAL212_2317 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004295301.1 2308294 D 153948 CDS YP_004295302.1 325982900 10298851 complement(2309906..2310529) 1 NC_015222.1 KEGG: nmu:Nmul_A2031 hypothetical protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif putative anchor domain-containing protein 2310529 10298851 NAL212_2318 Nitrosomonas sp. AL212 PEP motif putative anchor domain-containing protein YP_004295302.1 2309906 R 153948 CDS YP_004295303.1 325982901 10298852 complement(2311064..2311417) 1 NC_015222.1 KEGG: neu:NE0846 hypothetical protein; hypothetical protein 2311417 10298852 NAL212_2319 Nitrosomonas sp. AL212 hypothetical protein YP_004295303.1 2311064 R 153948 CDS YP_004295304.1 325982902 10298853 complement(2311912..2312250) 1 NC_015222.1 TIGRFAM: Uncharacterised protein family UPF0102; HAMAP: Uncharacterised protein family UPF0102; KEGG: net:Neut_1662 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; hypothetical protein 2312250 10298853 NAL212_2320 Nitrosomonas sp. AL212 hypothetical protein YP_004295304.1 2311912 R 153948 CDS YP_004295305.1 325982903 10298854 complement(2312240..2313355) 1 NC_015222.1 PFAM: LppC putative lipoprotein; KEGG: slt:Slit_2963 LppC family lipoprotein; LppC family lipoprotein 2313355 10298854 NAL212_2321 Nitrosomonas sp. AL212 LppC family lipoprotein YP_004295305.1 2312240 R 153948 CDS YP_004295306.1 325982904 10298855 2313366..2314223 1 NC_015222.1 KEGG: nmu:Nmul_A0196 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0011; PFAM: Tetrapyrrole methylase; hypothetical protein 2314223 10298855 NAL212_2322 Nitrosomonas sp. AL212 hypothetical protein YP_004295306.1 2313366 D 153948 CDS YP_004295307.1 325982905 10298856 2314287..2315324 1 NC_015222.1 PFAM: Amidohydrolase 1; TIGRFAM: Dihydroorotase homodimeric type; HAMAP: Dihydroorotase homodimeric type; KEGG: nmu:Nmul_A0354 dihydroorotase; dihydroorotase 2315324 10298856 NAL212_2323 Nitrosomonas sp. AL212 dihydroorotase YP_004295307.1 2314287 D 153948 CDS YP_004295308.1 325982906 10298857 2315804..2316097 1 NC_015222.1 KEGG: api:100166722 hypothetical protein LOC100166722; hypothetical protein 2316097 10298857 NAL212_2324 Nitrosomonas sp. AL212 hypothetical protein YP_004295308.1 2315804 D 153948 CDS YP_004295309.1 325982907 10298858 2316368..2317489 1 NC_015222.1 PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal; Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal; KEGG: neu:NE1485 D-alanyl-D-alanine carboxypeptidase; SMART: Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal; beta-lactamase 2317489 10298858 NAL212_2325 Nitrosomonas sp. AL212 beta-lactamase YP_004295309.1 2316368 D 153948 CDS YP_004295310.1 325982908 10298859 2317521..2318390 1 NC_015222.1 KEGG: nmu:Nmul_A1990 aminotransferase, class IV; PFAM: Aminotransferase, class IV; D-amino-acid transaminase 2318390 10298859 NAL212_2326 Nitrosomonas sp. AL212 D-amino-acid transaminase YP_004295310.1 2317521 D 153948 CDS YP_004295311.1 325982909 10298860 2318422..2318688 1 NC_015222.1 PFAM: Protein of unknown function DUF493; KEGG: net:Neut_0759 hypothetical protein; hypothetical protein 2318688 10298860 NAL212_2327 Nitrosomonas sp. AL212 hypothetical protein YP_004295311.1 2318422 D 153948 CDS YP_004295312.1 325982910 10298861 2318695..2319342 1 NC_015222.1 TIGRFAM: Octanoyltransferase; KEGG: nmu:Nmul_A1988 lipoate-protein ligase B; PFAM: Biotin/lipoate A/B protein ligase; lipoate-protein ligase B 2319342 10298861 NAL212_2328 Nitrosomonas sp. AL212 lipoate-protein ligase B YP_004295312.1 2318695 D 153948 CDS YP_004295313.1 325982911 10298862 2319356..2320300 1 NC_015222.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Lipoate synthase; KEGG: nmu:Nmul_A1987 lipoyl synthase; PFAM: Radical SAM; lipoic acid synthetase 2320300 10298862 NAL212_2329 Nitrosomonas sp. AL212 lipoic acid synthetase YP_004295313.1 2319356 D 153948 CDS YP_004295314.1 325982912 10298863 complement(2320336..2320752) 1 NC_015222.1 PFAM: Peroxiredoxin, OsmC-like protein; KEGG: net:Neut_1426 OsmC family protein; OsmC family protein 2320752 10298863 NAL212_2330 Nitrosomonas sp. AL212 OsmC family protein YP_004295314.1 2320336 R 153948 CDS YP_004295315.1 325982913 10298864 complement(2320839..2321150) 1 NC_015222.1 PFAM: Cytochrome c, class I; KEGG: neu:NE0102 cytochrome c-552 precursor; cytochrome c class I 2321150 10298864 NAL212_2331 Nitrosomonas sp. AL212 cytochrome c class I YP_004295315.1 2320839 R 153948 CDS YP_004295316.1 325982914 10298865 complement(2321384..2323057) 1 NC_015222.1 TIGRFAM: Dihydroxy-acid dehydratase; KEGG: nmu:Nmul_A0346 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 2323057 10298865 NAL212_2332 Nitrosomonas sp. AL212 dihydroxy-acid dehydratase YP_004295316.1 2321384 R 153948 CDS YP_004295317.1 325982915 10298866 2323157..2323999 1 NC_015222.1 KEGG: nmu:Nmul_A0348 prolipoprotein diacylglyceryl transferase; TIGRFAM: Prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 2323999 10298866 NAL212_2333 Nitrosomonas sp. AL212 prolipoprotein diacylglyceryl transferase YP_004295317.1 2323157 D 153948 CDS YP_004295318.1 325982916 10298867 2324099..2324488 1 NC_015222.1 KEGG: nmu:Nmul_A2466 hypothetical protein; hypothetical protein 2324488 10298867 NAL212_2334 Nitrosomonas sp. AL212 hypothetical protein YP_004295318.1 2324099 D 153948 CDS YP_004295319.1 325982917 10298868 complement(2324762..2326069) 1 NC_015222.1 TIGRFAM: Signal transduction histidine kinase, phosphate regulon sensor PhoR; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: net:Neut_0960 periplasmic sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; PAS/PAC sensor signal transduction histidine kinase 2326069 10298868 NAL212_2335 Nitrosomonas sp. AL212 PAS/PAC sensor signal transduction histidine kinase YP_004295319.1 2324762 R 153948 CDS YP_004295320.1 325982918 10298869 complement(2326220..2326942) 1 NC_015222.1 TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; KEGG: azo:azo0164 phosphate regulon transcriptional regulatory protein; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; winged helix family two component transcriptional regulator PhoB 2326942 10298869 NAL212_2336 Nitrosomonas sp. AL212 winged helix family two component transcriptional regulator PhoB YP_004295320.1 2326220 R 153948 CDS YP_004295321.1 325982919 10298870 2327031..2327441 1 NC_015222.1 PFAM: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal; KEGG: nmu:Nmul_A2270 hypothetical protein; hypothetical protein 2327441 10298870 NAL212_2337 Nitrosomonas sp. AL212 hypothetical protein YP_004295321.1 2327031 D 153948 CDS YP_004295322.1 325982920 10298871 2327491..2328225 1 NC_015222.1 KEGG: neu:NE1146 ubiquinone/menaquinone biosynthesis methlytransferase; TIGRFAM: UbiE/COQ5 methyltransferase; PFAM: UbiE/COQ5 methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase 2328225 10298871 NAL212_2338 Nitrosomonas sp. AL212 ubiquinone/menaquinone biosynthesis methyltransferase YP_004295322.1 2327491 D 153948 CDS YP_004295323.1 325982921 10298872 complement(2328343..2328726) 1 NC_015222.1 KEGG: net:Neut_0128 hypothetical protein; hypothetical protein 2328726 10298872 NAL212_2339 Nitrosomonas sp. AL212 hypothetical protein YP_004295323.1 2328343 R 153948 CDS YP_004295324.1 325982922 10298873 2328849..2328944 1 NC_015222.1 hypothetical protein 2328944 10298873 NAL212_2340 Nitrosomonas sp. AL212 hypothetical protein YP_004295324.1 2328849 D 153948 CDS YP_004295325.1 325982923 10298874 2329394..2329624 1 NC_015222.1 manually curated; KEGG: pde:Pden_2067 hypothetical protein; hypothetical protein 2329624 10298874 NAL212_2341 Nitrosomonas sp. AL212 hypothetical protein YP_004295325.1 2329394 D 153948 CDS YP_004295326.1 325982924 10298875 2329847..2330383 1 NC_015222.1 PFAM: Outer membrane lipoprotein Slp; KEGG: nmu:Nmul_A2260 Slp family outer membrane lipoprotein; outer membrane lipoprotein Slp 2330383 10298875 NAL212_2342 Nitrosomonas sp. AL212 outer membrane lipoprotein Slp YP_004295326.1 2329847 D 153948 CDS YP_004295327.1 325982925 10298876 complement(2330443..2331528) 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: ppd:Ppro_1834 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 2331528 10298876 NAL212_2343 Nitrosomonas sp. AL212 diguanylate cyclase YP_004295327.1 2330443 R 153948 CDS YP_004295328.1 325982926 10298877 2331924..2332235 1 NC_015222.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: neu:NE0621 hypothetical protein; antibiotic biosynthesis monooxygenase 2332235 10298877 NAL212_2344 Nitrosomonas sp. AL212 antibiotic biosynthesis monooxygenase YP_004295328.1 2331924 D 153948 CDS YP_004295329.1 325982927 10298878 2332228..2333412 1 NC_015222.1 KEGG: neu:NE0620 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; alcohol dehydrogenase 2333412 10298878 NAL212_2345 Nitrosomonas sp. AL212 alcohol dehydrogenase YP_004295329.1 2332228 D 153948 CDS YP_004295330.1 325982928 10298879 complement(2333589..2334218) 1 NC_015222.1 SMART: Protein phosphatase 2C-like; KEGG: tal:Thal_0189 protein serine/threonine phosphatase; protein serine/threonine phosphatase 2334218 10298879 NAL212_2346 Nitrosomonas sp. AL212 protein serine/threonine phosphatase YP_004295330.1 2333589 R 153948 CDS YP_004295331.1 325982929 10298880 complement(2334245..2335516) 1 NC_015222.1 KEGG: cro:ROD_35221 hypothetical protein; hypothetical protein 2335516 10298880 NAL212_2347 Nitrosomonas sp. AL212 hypothetical protein YP_004295331.1 2334245 R 153948 CDS YP_004295332.1 325982930 10298882 complement(2335984..2336697) 1 NC_015222.1 PFAM: Dienelactone hydrolase; KEGG: cbc:CbuK_0985 carboxymethylenebutenolidase; dienelactone hydrolase 2336697 10298882 NAL212_2349 Nitrosomonas sp. AL212 dienelactone hydrolase YP_004295332.1 2335984 R 153948 CDS YP_004295333.1 325982931 10298883 2336808..2337329 1 NC_015222.1 PFAM: Domain of unknown function DUF336; KEGG: noc:Noc_2147 hypothetical protein; hypothetical protein 2337329 10298883 NAL212_2350 Nitrosomonas sp. AL212 hypothetical protein YP_004295333.1 2336808 D 153948 CDS YP_004295334.1 325982932 10298884 complement(2337337..2338377) 1 NC_015222.1 TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: nmu:Nmul_A1386 DNA polymerase III, delta prime subunit; DNA polymerase III, delta prime subunit 2338377 10298884 NAL212_2351 Nitrosomonas sp. AL212 DNA polymerase III, delta prime subunit YP_004295334.1 2337337 R 153948 CDS YP_004295335.1 325982933 10298885 complement(2338370..2338996) 1 NC_015222.1 TIGRFAM: Thymidylate kinase; KEGG: neu:NE2181 thymidylate kinase; PFAM: Thymidylate kinase; thymidylate kinase 2338996 10298885 NAL212_2352 Nitrosomonas sp. AL212 thymidylate kinase YP_004295335.1 2338370 R 153948 CDS YP_004295336.1 325982934 10298886 2339069..2339659 1 NC_015222.1 KEGG: net:Neut_0535 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 2339659 10298886 NAL212_2353 Nitrosomonas sp. AL212 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_004295336.1 2339069 D 153948 CDS YP_004295337.1 325982935 10298887 2339838..2340113 1 NC_015222.1 PFAM: Protein of unknown function DUF497; KEGG: slt:Slit_0383 protein of unknown function DUF497; hypothetical protein 2340113 10298887 NAL212_2354 Nitrosomonas sp. AL212 hypothetical protein YP_004295337.1 2339838 D 153948 CDS YP_004295338.1 325982936 10298888 2340097..2340381 1 NC_015222.1 KEGG: tmz:Tmz1t_2739 hypothetical protein; hypothetical protein 2340381 10298888 NAL212_2355 Nitrosomonas sp. AL212 hypothetical protein YP_004295338.1 2340097 D 153948 CDS YP_004295339.1 325982937 10298889 complement(2340496..2340873) 1 NC_015222.1 KEGG: phu:Phum_PHUM079850 hypothetical protein; hypothetical protein 2340873 10298889 NAL212_2356 Nitrosomonas sp. AL212 hypothetical protein YP_004295339.1 2340496 R 153948 CDS YP_004295340.1 325982938 10298890 complement(2341010..2341918) 1 NC_015222.1 PFAM: Aldose 1-epimerase; KEGG: neu:NE1003 aldose 1-epimerase; aldose 1-epimerase 2341918 10298890 NAL212_2357 Nitrosomonas sp. AL212 aldose 1-epimerase YP_004295340.1 2341010 R 153948 CDS YP_004295341.1 325982939 10298891 complement(2341955..2343169) 1 NC_015222.1 PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; TIGRFAM: Phosphoribosylglycinamide formyltransferase 2; HAMAP: Phosphoribosylglycinamide formyltransferase 2; KEGG: gca:Galf_1708 phosphoribosylglycinamide formyltransferase 2; phosphoribosylglycinamide formyltransferase 2 2343169 10298891 NAL212_2358 Nitrosomonas sp. AL212 phosphoribosylglycinamide formyltransferase 2 YP_004295341.1 2341955 R 153948 CDS YP_004295342.1 325982940 10298892 complement(2343159..2344235) 1 NC_015222.1 KEGG: nmu:Nmul_A2530 4Fe-4S cluster binding; TIGRFAM: 4Fe-4S cluster binding; PFAM: Domain of unknown function DUF1730; 4Fe-4S binding domain; iron-sulfur cluster binding protein 2344235 10298892 NAL212_2359 Nitrosomonas sp. AL212 iron-sulfur cluster binding protein YP_004295342.1 2343159 R 153948 CDS YP_004295343.1 325982941 10298893 2344275..2344781 1 NC_015222.1 manually curated; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; KEGG: neu:NE0657 hydrolase; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; hypothetical protein 2344781 10298893 NAL212_2360 Nitrosomonas sp. AL212 hypothetical protein YP_004295343.1 2344275 D 153948 CDS YP_004295344.1 325982942 10298894 2344745..2346214 1 NC_015222.1 KEGG: net:Neut_1896 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Localisation of periplasmic protein complexes; SMART: Cell wall hydrolase/autolysin, catalytic; cell wall hydrolase/autolysin 2346214 10298894 NAL212_2361 Nitrosomonas sp. AL212 cell wall hydrolase/autolysin YP_004295344.1 2344745 D 153948 CDS YP_004295345.1 325982943 10298895 2346446..2347558 1 NC_015222.1 KEGG: nmu:Nmul_A1981 hypothetical protein; TIGRFAM: Domain of unknown function DUF140; PFAM: Domain of unknown function DUF140; hypothetical protein 2347558 10298895 NAL212_2362 Nitrosomonas sp. AL212 hypothetical protein YP_004295345.1 2346446 D 153948 CDS YP_004295346.1 325982944 10298896 2347563..2348372 1 NC_015222.1 PFAM: ABC transporter-like; KEGG: net:Neut_2235 ABC transporter-related protein; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 2348372 10298896 NAL212_2363 Nitrosomonas sp. AL212 sulfate-transporting ATPase YP_004295346.1 2347563 D 153948 CDS YP_004295347.1 325982945 10298897 2348345..2349241 1 NC_015222.1 PFAM: Mammalian cell entry-related; KEGG: nmu:Nmul_A1983 hypothetical protein; mammalian cell entry domain-containing protein 2349241 10298897 NAL212_2364 Nitrosomonas sp. AL212 mammalian cell entry domain-containing protein YP_004295347.1 2348345 D 153948 CDS YP_004295348.1 325982946 10298898 2349238..2349864 1 NC_015222.1 PFAM: Protein of unknown function DUF330; KEGG: nmu:Nmul_A1984 putative lipoprotein; hypothetical protein 2349864 10298898 NAL212_2365 Nitrosomonas sp. AL212 hypothetical protein YP_004295348.1 2349238 D 153948 CDS YP_004295349.1 325982947 10298899 2349956..2350090 1 NC_015222.1 KEGG: kko:Kkor_0174 lipoprotein Lppl; hypothetical protein 2350090 10298899 NAL212_2366 Nitrosomonas sp. AL212 hypothetical protein YP_004295349.1 2349956 D 153948 CDS YP_004295350.1 325982948 10298900 2350087..2351340 1 NC_015222.1 TIGRFAM: Diaminopimelate decarboxylase; KEGG: neu:NE1957 Orn/DAP/Arg decarboxylase family protein; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal; diaminopimelate decarboxylase 2351340 10298900 NAL212_2367 Nitrosomonas sp. AL212 diaminopimelate decarboxylase YP_004295350.1 2350087 D 153948 CDS YP_004295351.1 325982949 10298901 2351410..2352468 1 NC_015222.1 PFAM: Squalene/phytoene synthase; KEGG: net:Neut_0403 squalene/phytoene synthase; squalene/phytoene synthase 2352468 10298901 NAL212_2368 Nitrosomonas sp. AL212 squalene/phytoene synthase YP_004295351.1 2351410 D 153948 CDS YP_004295352.1 325982950 10298902 2352483..2353472 1 NC_015222.1 KEGG: nmu:Nmul_A2281 NAD-dependent epimerase/dehydratase; TIGRFAM: Hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; hopanoid-associated sugar epimerase 2353472 10298902 NAL212_2369 Nitrosomonas sp. AL212 hopanoid-associated sugar epimerase YP_004295352.1 2352483 D 153948 CDS YP_004295353.1 325982951 10298903 2353772..2354179 1 NC_015222.1 KEGG: neu:NE1923 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; response regulator receiver protein 2354179 10298903 NAL212_2370 Nitrosomonas sp. AL212 response regulator receiver protein YP_004295353.1 2353772 D 153948 CDS YP_004295354.1 325982952 10298904 2354212..2354970 1 NC_015222.1 PFAM: Chemotaxis phosphatase, CheZ; KEGG: gca:Galf_1017 chemotaxis phosphatase, CheZ; chemotaxis phosphatase, CheZ 2354970 10298904 NAL212_2371 Nitrosomonas sp. AL212 chemotaxis phosphatase, CheZ YP_004295354.1 2354212 D 153948 CDS YP_004295355.1 325982953 10298905 2355671..2355898 1 NC_015222.1 KEGG: net:Neut_0952 hypothetical protein; hypothetical protein 2355898 10298905 NAL212_2372 Nitrosomonas sp. AL212 hypothetical protein YP_004295355.1 2355671 D 153948 CDS YP_004295356.1 325982954 10298906 2356314..2357141 1 NC_015222.1 PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal; KEGG: nmu:Nmul_A2296 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 2357141 10298906 NAL212_2373 Nitrosomonas sp. AL212 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_004295356.1 2356314 D 153948 CDS YP_004295357.1 325982955 10298907 complement(2357157..2358662) 1 NC_015222.1 KEGG: nde:NIDE1041 carboxypeptidase Taq; PFAM: Peptidase M32, carboxypeptidase Taq metallopeptidase; carboxypeptidase Taq 2358662 10298907 NAL212_2374 Nitrosomonas sp. AL212 carboxypeptidase Taq YP_004295357.1 2357157 R 153948 CDS YP_004295358.1 325982956 10298908 2358779..2359216 1 NC_015222.1 KEGG: neu:NE1756 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00701; PFAM: Uncharacterised protein family UPF0093; hypothetical protein 2359216 10298908 NAL212_2375 Nitrosomonas sp. AL212 hypothetical protein YP_004295358.1 2358779 D 153948 CDS YP_004295359.1 325982957 10298909 complement(2359286..2359570) 1 NC_015222.1 KEGG: ant:Arnit_1534 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 2359570 10298909 NAL212_2376 Nitrosomonas sp. AL212 helix-turn-helix domain-containing protein YP_004295359.1 2359286 R 153948 CDS YP_004295360.1 325982958 10298910 2359753..2360025 1 NC_015222.1 KEGG: alv:Alvin_3221 hypothetical protein; hypothetical protein 2360025 10298910 NAL212_2377 Nitrosomonas sp. AL212 hypothetical protein YP_004295360.1 2359753 D 153948 CDS YP_004295361.1 325982959 10298911 complement(2360091..2360492) 1 NC_015222.1 KEGG: cta:CTA_0394 aspartate kinase; hypothetical protein 2360492 10298911 NAL212_2378 Nitrosomonas sp. AL212 hypothetical protein YP_004295361.1 2360091 R 153948 CDS YP_004295362.1 325982960 10298912 2360583..2360939 1 NC_015222.1 KEGG: neu:NE1553 transposase; transposase 2360939 10298912 NAL212_2379 Nitrosomonas sp. AL212 transposase YP_004295362.1 2360583 D 153948 CDS YP_004295363.1 325982961 10298913 complement(2360923..2362506) 1 NC_015222.1 PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase; transposase IS66 2362506 10298913 NAL212_2380 Nitrosomonas sp. AL212 transposase IS66 YP_004295363.1 2360923 R 153948 CDS YP_004295364.1 325982962 10298914 complement(2362560..2362910) 1 NC_015222.1 KEGG: eba:ebB55 transposase, fragment; manually curated; PFAM: Transposase (putative), IS66 Orf2-like; IS66 Orf2 family protein 2362910 10298914 NAL212_2381 Nitrosomonas sp. AL212 IS66 Orf2 family protein YP_004295364.1 2362560 R 153948 CDS YP_004295365.1 325982963 10298915 complement(2362898..2363194) 1 NC_015222.1 KEGG: dat:HRM2_44620 hypothetical protein; hypothetical protein 2363194 10298915 NAL212_2382 Nitrosomonas sp. AL212 hypothetical protein YP_004295365.1 2362898 R 153948 CDS YP_004295366.1 325982964 10298917 complement(2363917..2364369) 1 NC_015222.1 SMART: PAC motif; PAS; TIGRFAM: PAS; KEGG: nhl:Nhal_0365 PAS sensor protein; PFAM: PAS fold; PAS sensor protein 2364369 10298917 NAL212_2384 Nitrosomonas sp. AL212 PAS sensor protein YP_004295366.1 2363917 R 153948 CDS YP_004295367.1 325982965 10298918 complement(2364424..2364903) 1 NC_015222.1 PFAM: Polyketide cyclase/dehydrase; KEGG: nmu:Nmul_A1788 hypothetical protein; polyketide cyclase/dehydrase 2364903 10298918 NAL212_2385 Nitrosomonas sp. AL212 polyketide cyclase/dehydrase YP_004295367.1 2364424 R 153948 CDS YP_004295368.1 325982966 10298919 complement(2364927..2366090) 1 NC_015222.1 PFAM: FAD dependent oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; KEGG: net:Neut_0652 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase 2366090 10298919 NAL212_2386 Nitrosomonas sp. AL212 FAD dependent oxidoreductase YP_004295368.1 2364927 R 153948 CDS YP_004295369.1 325982967 10298920 complement(2366253..2367146) 1 NC_015222.1 TIGRFAM: Glutamyl-Q tRNA(Asp) synthetase; HAMAP: Glutamyl-Q tRNA(Asp) synthetase; KEGG: nmu:Nmul_A0797 glutamate--tRNA ligase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl-Q tRNA(Asp) synthetase 2367146 10298920 NAL212_2387 Nitrosomonas sp. AL212 glutamyl-Q tRNA(Asp) synthetase YP_004295369.1 2366253 R 153948 CDS YP_004295370.1 325982968 10298921 2367302..2367622 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2367622 10298921 NAL212_2388 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004295370.1 2367302 D 153948 CDS YP_004295371.1 325982969 10298922 2367622..2368521 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit; integrase catalytic region 2368521 10298922 NAL212_2389 Nitrosomonas sp. AL212 integrase catalytic region YP_004295371.1 2367622 D 153948 CDS YP_004295372.1 325982970 10298923 2368604..2369998 1 NC_015222.1 TIGRFAM: Murein peptide ligase; KEGG: slt:Slit_0052 UDP-N-acetylmuramate; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; UDP-N-acetylmuramate 2369998 10298923 NAL212_2390 Nitrosomonas sp. AL212 UDP-N-acetylmuramate YP_004295372.1 2368604 D 153948 CDS YP_004295373.1 325982971 10298924 complement(2370037..2370564) 1 NC_015222.1 KEGG: nmu:Nmul_A0935 adenine phosphoribosyltransferase; TIGRFAM: Adenine phosphoribosyl transferase; PFAM: Phosphoribosyltransferase; adenine phosphoribosyltransferase 2370564 10298924 NAL212_2391 Nitrosomonas sp. AL212 adenine phosphoribosyltransferase YP_004295373.1 2370037 R 153948 CDS YP_004295374.1 325982972 10298925 complement(2370683..2371783) 1 NC_015222.1 TIGRFAM: Nitrite reductase, copper containing; KEGG: rpa:RPA3306 nitrite reductase, major outer membrane copper-containing protein; PFAM: Multicopper oxidase, type 1; Multicopper oxidase, type 3; nitrite reductase 2371783 10298925 NAL212_2392 Nitrosomonas sp. AL212 nitrite reductase YP_004295374.1 2370683 R 153948 CDS YP_004295375.1 325982973 10298926 2372529..2373824 1 NC_015222.1 KEGG: neu:NE1294 putative glutamate--cysteine ligase; TIGRFAM: Glutamate--cysteine ligase GshA; PFAM: Glutamate--cysteine ligase GshA; glutamate/cysteine ligase 2373824 10298926 NAL212_2393 Nitrosomonas sp. AL212 glutamate/cysteine ligase YP_004295375.1 2372529 D 153948 CDS YP_004295376.1 325982974 10298927 2373833..2374819 1 NC_015222.1 TIGRFAM: Glutathione synthetase, prokaryotic; KEGG: neu:NE1295 glutathione synthetase; PFAM: Prokaryotic glutathione synthetase, ATP-binding; Prokaryotic glutathione synthetase, N-terminal; glutathione synthetase 2374819 10298927 NAL212_2394 Nitrosomonas sp. AL212 glutathione synthetase YP_004295376.1 2373833 D 153948 CDS YP_004295377.1 325982975 10298928 2374978..2375898 1 NC_015222.1 PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: pat:Patl_1023 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 2375898 10298928 NAL212_2395 Nitrosomonas sp. AL212 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_004295377.1 2374978 D 153948 CDS YP_004295378.1 325982976 10298929 complement(2375945..2377786) 1 NC_015222.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: nmu:Nmul_A1798 ATP-dependent metalloprotease FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; ATP-dependent metalloprotease FtsH 2377786 10298929 NAL212_2396 Nitrosomonas sp. AL212 ATP-dependent metalloprotease FtsH YP_004295378.1 2375945 R 153948 CDS YP_004295379.1 325982977 10298930 complement(2377908..2379257) 1 NC_015222.1 PFAM: Membrane protein, aromatic hydrocarbon degradation; KEGG: mfa:Mfla_2658 aromatic hydrocarbon degradation membrane protein; aromatic hydrocarbon degradation membrane protein 2379257 10298930 NAL212_2397 Nitrosomonas sp. AL212 aromatic hydrocarbon degradation membrane protein YP_004295379.1 2377908 R 153948 CDS YP_004295380.1 325982978 10298931 2379606..2382002 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold; KEGG: noc:Noc_2021 PAS sensor diguanylate cyclase/phophodiesterase; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2382002 10298931 NAL212_2398 Nitrosomonas sp. AL212 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004295380.1 2379606 D 153948 CDS YP_004295381.1 325982979 10298932 complement(2382135..2382872) 1 NC_015222.1 PFAM: Cyclic nucleotide-binding domain; KEGG: bxe:Bxe_B1519 Crp/FNR family transcriptional regulator; CarD family transcriptional regulator 2382872 10298932 NAL212_2399 Nitrosomonas sp. AL212 CarD family transcriptional regulator YP_004295381.1 2382135 R 153948 CDS YP_004295382.1 325982980 10298934 2383739..2385046 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase; transposase IS4 family protein 2385046 10298934 NAL212_2401 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004295382.1 2383739 D 153948 CDS YP_004295383.1 325982981 10298937 complement(2386070..2387653) 1 NC_015222.1 PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase; transposase IS66 2387653 10298937 NAL212_2404 Nitrosomonas sp. AL212 transposase IS66 YP_004295383.1 2386070 R 153948 CDS YP_004295384.1 325982982 10298938 complement(2387707..2388078) 1 NC_015222.1 PFAM: Transposase (putative), IS66 Orf2-like; KEGG: eba:ebB55 transposase, fragment; IS66 Orf2 family protein 2388078 10298938 NAL212_2405 Nitrosomonas sp. AL212 IS66 Orf2 family protein YP_004295384.1 2387707 R 153948 CDS YP_004295385.1 325982983 10298939 complement(2388045..2388341) 1 NC_015222.1 KEGG: dat:HRM2_44620 hypothetical protein; hypothetical protein 2388341 10298939 NAL212_2406 Nitrosomonas sp. AL212 hypothetical protein YP_004295385.1 2388045 R 153948 CDS YP_004295386.1 325982984 10298941 complement(2388982..2389875) 1 NC_015222.1 KEGG: ppr:PBPRB1378 hypothetical protein; hypothetical protein 2389875 10298941 NAL212_2408 Nitrosomonas sp. AL212 hypothetical protein YP_004295386.1 2388982 R 153948 CDS YP_004295387.1 325982985 10298942 complement(2390031..2390564) 1 NC_015222.1 TIGRFAM: Formylmethionine deformylase; KEGG: mfa:Mfla_1466 peptide deformylase; PFAM: Formylmethionine deformylase; peptide deformylase 2390564 10298942 NAL212_2409 Nitrosomonas sp. AL212 peptide deformylase YP_004295387.1 2390031 R 153948 CDS YP_004295388.1 325982986 10298943 complement(2390554..2391300) 1 NC_015222.1 KEGG: nmu:Nmul_A0650 5'-methylthioadenosine phosphorylase; PFAM: Nucleoside phosphorylase domain; S-methyl-5'-thioadenosine phosphorylase 2391300 10298943 NAL212_2410 Nitrosomonas sp. AL212 S-methyl-5'-thioadenosine phosphorylase YP_004295388.1 2390554 R 153948 CDS YP_004295389.1 325982987 10298944 complement(2391320..2391865) 1 NC_015222.1 PFAM: Phosphoribosyltransferase; KEGG: nmu:Nmul_A0649 hypoxanthine-guanine phosphoribosyltransferase; phosphoribosyltransferase 2391865 10298944 NAL212_2411 Nitrosomonas sp. AL212 phosphoribosyltransferase YP_004295389.1 2391320 R 153948 CDS YP_004295390.1 325982988 10298945 complement(2391873..2393906) 1 NC_015222.1 TIGRFAM: NAD-dependent DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; Zinc-finger, NAD-dependent DNA ligase C4-type; BRCT; NAD-dependent DNA ligase, OB-fold; KEGG: nmu:Nmul_A0647 DNA ligase, NAD-dependent; SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT; NAD-dependent DNA ligase 2393906 10298945 NAL212_2412 Nitrosomonas sp. AL212 NAD-dependent DNA ligase YP_004295390.1 2391873 R 153948 CDS YP_004295391.1 325982989 10298946 2394028..2394852 1 NC_015222.1 PFAM: Protein of unknown function DUF2914; KEGG: neu:NE1157 hypothetical protein; hypothetical protein 2394852 10298946 NAL212_2413 Nitrosomonas sp. AL212 hypothetical protein YP_004295391.1 2394028 D 153948 CDS YP_004295392.1 325982990 10298947 2394891..2395436 1 NC_015222.1 PFAM: NUDIX hydrolase domain; KEGG: net:Neut_1448 NUDIX hydrolase; NUDIX hydrolase 2395436 10298947 NAL212_2414 Nitrosomonas sp. AL212 NUDIX hydrolase YP_004295392.1 2394891 D 153948 CDS YP_004295393.1 325982991 10298948 2395458..2396237 1 NC_015222.1 KEGG: pin:Ping_0586 hypothetical protein; hypothetical protein 2396237 10298948 NAL212_2415 Nitrosomonas sp. AL212 hypothetical protein YP_004295393.1 2395458 D 153948 CDS YP_004295394.1 325982992 10298949 2396320..2397477 1 NC_015222.1 KEGG: reu:Reut_A2245 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP015557; PFAM: Uncharacterised conserved protein UCP015557; hypothetical protein 2397477 10298949 NAL212_2416 Nitrosomonas sp. AL212 hypothetical protein YP_004295394.1 2396320 D 153948 CDS YP_004295395.1 325982993 10298950 2397556..2398119 1 NC_015222.1 TIGRFAM: Translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; KEGG: cvi:CV_1378 elongation factor P; SMART: Elongation factor P, C-terminal; translation elongation factor P 2398119 10298950 NAL212_2417 Nitrosomonas sp. AL212 translation elongation factor P YP_004295395.1 2397556 D 153948 CDS YP_004295396.1 325982994 10298951 complement(2398170..2398730) 1 NC_015222.1 KEGG: nmu:Nmul_A0701 nitrogen-fixing NifU-like; PFAM: NIF system FeS cluster assembly, NifU-like scaffold, N-terminal; NIF system FeS cluster assembly, NifU, C-terminal; SMART: NIF system FeS cluster assembly, NifU-like scaffold, N-terminal; Scaffold protein Nfu/NifU 2398730 10298951 NAL212_2418 Nitrosomonas sp. AL212 Scaffold protein Nfu/NifU YP_004295396.1 2398170 R 153948 CDS YP_004295397.1 325982995 10298952 complement(2398816..2399304) 1 NC_015222.1 KEGG: nmu:Nmul_A0700 SUF system FeS assembly protein; TIGRFAM: SUF system FeS cluster assembly, SufU scaffold; PFAM: NIF system FeS cluster assembly, NifU, N-terminal; NifU family SUF system FeS assembly protein 2399304 10298952 NAL212_2419 Nitrosomonas sp. AL212 NifU family SUF system FeS assembly protein YP_004295397.1 2398816 R 153948 CDS YP_004295398.1 325982996 10298953 complement(2399304..2400563) 1 NC_015222.1 TIGRFAM: Cysteine desulfurase, SufS; KEGG: nmu:Nmul_A0699 SufS subfamily cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; SufS subfamily cysteine desulfurase 2400563 10298953 NAL212_2420 Nitrosomonas sp. AL212 SufS subfamily cysteine desulfurase YP_004295398.1 2399304 R 153948 CDS YP_004295399.1 325982997 10298954 complement(2400560..2401867) 1 NC_015222.1 KEGG: nmu:Nmul_A0698 FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: SUF system FeS cluster assembly, SufBD; FeS assembly protein SufD 2401867 10298954 NAL212_2421 Nitrosomonas sp. AL212 FeS assembly protein SufD YP_004295399.1 2400560 R 153948 CDS YP_004295400.1 325982998 10298955 complement(2401864..2402658) 1 NC_015222.1 TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: net:Neut_1240 FeS assembly ATPase SufC; SMART: ATPase, AAA+ type, core; FeS assembly ATPase SufC 2402658 10298955 NAL212_2422 Nitrosomonas sp. AL212 FeS assembly ATPase SufC YP_004295400.1 2401864 R 153948 CDS YP_004295401.1 325982999 10298956 complement(2402655..2404091) 1 NC_015222.1 KEGG: nmu:Nmul_A0696 cysteine desulfurase activator complex subunit SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD; FeS assembly protein SufB 2404091 10298956 NAL212_2423 Nitrosomonas sp. AL212 FeS assembly protein SufB YP_004295401.1 2402655 R 153948 CDS YP_004295402.1 325983000 10298957 complement(2404221..2404556) 1 NC_015222.1 KEGG: nmu:Nmul_A0695 HesB/YadR/YfhF; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; iron-sulfur cluster assembly accessory protein 2404556 10298957 NAL212_2424 Nitrosomonas sp. AL212 iron-sulfur cluster assembly accessory protein YP_004295402.1 2404221 R 153948 CDS YP_004295403.1 325983001 10298958 complement(2404705..2405193) 1 NC_015222.1 KEGG: nmu:Nmul_A0694 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcription regulator Rrf2; PFAM: Transcription regulator Rrf2; asnc family transcriptional regulator 2405193 10298958 NAL212_2425 Nitrosomonas sp. AL212 asnc family transcriptional regulator YP_004295403.1 2404705 R 153948 CDS YP_004295404.1 325983002 10298959 complement(2405330..2405440) 1 NC_015222.1 hypothetical protein 2405440 10298959 NAL212_2426 Nitrosomonas sp. AL212 hypothetical protein YP_004295404.1 2405330 R 153948 CDS YP_004295405.1 325983003 10298960 complement(2405430..2406329) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit; integrase catalytic region 2406329 10298960 NAL212_2427 Nitrosomonas sp. AL212 integrase catalytic region YP_004295405.1 2405430 R 153948 CDS YP_004295406.1 325983004 10298961 complement(2406329..2406649) 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2406649 10298961 NAL212_2428 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004295406.1 2406329 R 153948 CDS YP_004295407.1 325983005 10298963 2406960..2407781 1 NC_015222.1 KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 2407781 10298963 NAL212_2430 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004295407.1 2406960 D 153948 CDS YP_004295408.1 325983006 10298964 2408068..2408637 1 NC_015222.1 KEGG: bpr:GBP346_A2062 hemagglutinin family protein; hypothetical protein 2408637 10298964 NAL212_2431 Nitrosomonas sp. AL212 hypothetical protein YP_004295408.1 2408068 D 153948 CDS YP_004295409.1 325983007 10298965 complement(2408713..2409336) 1 NC_015222.1 KEGG: ddi:DDB_G0277915 Ras guanine nucleotide exchange factor; hypothetical protein 2409336 10298965 NAL212_2432 Nitrosomonas sp. AL212 hypothetical protein YP_004295409.1 2408713 R 153948 CDS YP_004295410.1 325983008 10298966 2409655..2409810 1 NC_015222.1 hypothetical protein 2409810 10298966 NAL212_2433 Nitrosomonas sp. AL212 hypothetical protein YP_004295410.1 2409655 D 153948 CDS YP_004295411.1 325983009 10298967 2409838..2410089 1 NC_015222.1 KEGG: pbe:PB301139.00.0 hypothetical protein; hypothetical protein 2410089 10298967 NAL212_2434 Nitrosomonas sp. AL212 hypothetical protein YP_004295411.1 2409838 D 153948 CDS YP_004295412.1 325983010 10298968 2410297..2411277 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: atu:Atu4436 IS5 family transposase; transposase IS4 family protein 2411277 10298968 NAL212_2435 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004295412.1 2410297 D 153948 CDS YP_004295413.1 325983011 10298969 2411378..2412235 1 NC_015222.1 manually curated; KEGG: rxy:Rxyl_2225 integrase catalytic subunit; integrase catalytic subunit 2412235 10298969 NAL212_2436 Nitrosomonas sp. AL212 integrase catalytic subunit YP_004295413.1 2411378 D 153948 CDS YP_004295414.1 325983012 10298970 complement(2412373..2413446) 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: dia:Dtpsy_3344 transposase IS4 family protein; transposase IS4 family protein 2413446 10298970 NAL212_2437 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004295414.1 2412373 R 153948 CDS YP_004295415.1 325983013 10298974 complement(2414566..2415465) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit; integrase catalytic region 2415465 10298974 NAL212_2441 Nitrosomonas sp. AL212 integrase catalytic region YP_004295415.1 2414566 R 153948 CDS YP_004295416.1 325983014 10298975 complement(2415465..2415785) 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2415785 10298975 NAL212_2442 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004295416.1 2415465 R 153948 CDS YP_004295417.1 325983015 10298977 2416212..2417030 1 NC_015222.1 manually curated; PFAM: IstB-like ATP-binding protein; KEGG: tmz:Tmz1t_3172 IstB domain protein ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 2417030 10298977 NAL212_2444 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004295417.1 2416212 D 153948 CDS YP_004295418.1 325983016 10298978 complement(2417249..2418334) 1 NC_015222.1 PFAM: Transposase, IS116/IS110/IS902; KEGG: ecp:ECP_4551 putative transposase; transposase IS116/IS110/IS902 family protein 2418334 10298978 NAL212_2445 Nitrosomonas sp. AL212 transposase IS116/IS110/IS902 family protein YP_004295418.1 2417249 R 153948 CDS YP_004295419.1 325983017 10298979 complement(2418447..2419346) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit; integrase catalytic region 2419346 10298979 NAL212_2446 Nitrosomonas sp. AL212 integrase catalytic region YP_004295419.1 2418447 R 153948 CDS YP_004295420.1 325983018 10298980 complement(2419346..2419666) 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2419666 10298980 NAL212_2447 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004295420.1 2419346 R 153948 CDS YP_004295421.1 325983019 10298982 2420417..2421571 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region; integrase catalytic region 2421571 10298982 NAL212_2449 Nitrosomonas sp. AL212 integrase catalytic region YP_004295421.1 2420417 D 153948 CDS YP_004295422.1 325983020 10298984 complement(2422039..2422251) 1 NC_015222.1 KEGG: gur:Gura_3602 helix-turn-helix domain-containing protein; hypothetical protein 2422251 10298984 NAL212_2451 Nitrosomonas sp. AL212 hypothetical protein YP_004295422.1 2422039 R 153948 CDS YP_004295423.1 325983021 10298985 complement(2422299..2422607) 1 NC_015222.1 KEGG: neu:NE0189 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; XRE family transcriptional regulator 2422607 10298985 NAL212_2452 Nitrosomonas sp. AL212 XRE family transcriptional regulator YP_004295423.1 2422299 R 153948 CDS YP_004295424.1 325983022 10298986 complement(2422598..2422912) 1 NC_015222.1 KEGG: noc:Noc_0284 hypothetical protein; hypothetical protein 2422912 10298986 NAL212_2453 Nitrosomonas sp. AL212 hypothetical protein YP_004295424.1 2422598 R 153948 CDS YP_004295425.1 325983023 10298987 complement(2422854..2423993) 1 NC_015222.1 PFAM: Integrase, catalytic core, phage; KEGG: lpf:lpl0065 hypothetical protein; integrase family protein 2423993 10298987 NAL212_2454 Nitrosomonas sp. AL212 integrase family protein YP_004295425.1 2422854 R 153948 CDS YP_004295426.1 325983024 10298988 2424171..2424410 1 NC_015222.1 KEGG: bam:Bamb_4189 plasmid stability protein-like protein; plasmid stability protein-like protein 2424410 10298988 NAL212_2455 Nitrosomonas sp. AL212 plasmid stability protein-like protein YP_004295426.1 2424171 D 153948 CDS YP_004295427.1 325983025 10298989 2424407..2424826 1 NC_015222.1 PFAM: PilT protein, N-terminal; KEGG: reu:Reut_A3455 PilT protein, N-terminal; PilT protein domain-containing protein 2424826 10298989 NAL212_2456 Nitrosomonas sp. AL212 PilT protein domain-containing protein YP_004295427.1 2424407 D 153948 CDS YP_004295428.1 325983026 10298991 2426248..2427144 1 NC_015222.1 KEGG: neu:NE1876 coproporphyrinogen III oxidase; PFAM: Coproporphyrinogen III oxidase; coproporphyrinogen oxidase 2427144 10298991 NAL212_2458 Nitrosomonas sp. AL212 coproporphyrinogen oxidase YP_004295428.1 2426248 D 153948 CDS YP_004295429.1 325983027 10298992 2427152..2428399 1 NC_015222.1 PFAM: Sodium:dicarboxylate symporter; KEGG: nmu:Nmul_A0633 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 2428399 10298992 NAL212_2459 Nitrosomonas sp. AL212 sodium:dicarboxylate symporter YP_004295429.1 2427152 D 153948 CDS YP_004295430.1 325983028 10298993 complement(2428419..2429567) 1 NC_015222.1 KEGG: nmu:Nmul_A1663 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; metal dependent phosphohydrolase 2429567 10298993 NAL212_2460 Nitrosomonas sp. AL212 metal dependent phosphohydrolase YP_004295430.1 2428419 R 153948 CDS YP_004295431.1 325983029 10298994 2429941..2430807 1 NC_015222.1 PFAM: RIO-like kinase; KEGG: gur:Gura_1606 protein of unknown function RIO1; RIO-like kinase 2430807 10298994 NAL212_2461 Nitrosomonas sp. AL212 RIO-like kinase YP_004295431.1 2429941 D 153948 CDS YP_004295432.1 325983030 10298996 complement(2430922..2432739) 1 NC_015222.1 KEGG: gdi:GDI_0967 putative resolvase; PFAM: Recombinase; Resolvase, N-terminal; SMART: Resolvase, N-terminal; recombinase 2432739 10298996 NAL212_2462 Nitrosomonas sp. AL212 recombinase YP_004295432.1 2430922 R 153948 CDS YP_004295433.1 325983031 10298997 complement(2433110..2433376) 1 NC_015222.1 KEGG: nha:Nham_0588 hypothetical protein; hypothetical protein 2433376 10298997 NAL212_2463 Nitrosomonas sp. AL212 hypothetical protein YP_004295433.1 2433110 R 153948 CDS YP_004295434.1 325983032 10298998 complement(2433373..2433636) 1 NC_015222.1 KEGG: aci:ACIAD1868 putative nucleoprotein/polynucleotide-associated enzyme; hypothetical protein 2433636 10298998 NAL212_2464 Nitrosomonas sp. AL212 hypothetical protein YP_004295434.1 2433373 R 153948 CDS YP_004295435.1 325983033 10298999 complement(2433647..2434129) 1 NC_015222.1 KEGG: pla:Plav_1628 hypothetical protein; hypothetical protein 2434129 10298999 NAL212_2465 Nitrosomonas sp. AL212 hypothetical protein YP_004295435.1 2433647 R 153948 CDS YP_004295436.1 325983034 10299000 complement(2434299..2435279) 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: atu:Atu4436 IS5 family transposase; transposase IS4 family protein 2435279 10299000 NAL212_2466 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004295436.1 2434299 R 153948 CDS YP_004295437.1 325983035 10299001 complement(2435318..2435473) 1 NC_015222.1 hypothetical protein 2435473 10299001 NAL212_2467 Nitrosomonas sp. AL212 hypothetical protein YP_004295437.1 2435318 R 153948 CDS YP_004295438.1 325983036 10299003 complement(2435877..2437031) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region; integrase catalytic region 2437031 10299003 NAL212_2469 Nitrosomonas sp. AL212 integrase catalytic region YP_004295438.1 2435877 R 153948 CDS YP_004295439.1 325983037 10299004 2437138..2438037 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit; integrase catalytic region 2438037 10299004 NAL212_2470 Nitrosomonas sp. AL212 integrase catalytic region YP_004295439.1 2437138 D 153948 CDS YP_004295440.1 325983038 10299005 2438079..2438471 1 NC_015222.1 manually curated; KEGG: llo:LLO_2896 TraM protein; hypothetical protein 2438471 10299005 NAL212_2471 Nitrosomonas sp. AL212 hypothetical protein YP_004295440.1 2438079 D 153948 CDS YP_004295441.1 325983039 10299006 2438502..2438831 1 NC_015222.1 KEGG: afr:AFE_0996 DNA binding protein, excisionase family; DNA binding protein, excisionase family 2438831 10299006 NAL212_2472 Nitrosomonas sp. AL212 DNA binding protein, excisionase family YP_004295441.1 2438502 D 153948 CDS YP_004295442.1 325983040 10299008 complement(2439151..2439933) 1 NC_015222.1 KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 2439933 10299008 NAL212_2474 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004295442.1 2439151 R 153948 CDS YP_004295443.1 325983041 10299009 complement(2439930..2440952) 1 NC_015222.1 PFAM: Integrase, catalytic core; Resolvase, helix-turn-helix domain; KEGG: pst:PSPTO_B0040 ISPsy4, transposase; integrase catalytic region 2440952 10299009 NAL212_2475 Nitrosomonas sp. AL212 integrase catalytic region YP_004295443.1 2439930 R 153948 CDS YP_004295444.1 325983042 10299010 2441058..2441708 1 NC_015222.1 PFAM: Integrase, catalytic core, phage; KEGG: afr:AFE_0995 site-specific recombinase, phage integrase family; integrase family protein 2441708 10299010 NAL212_2476 Nitrosomonas sp. AL212 integrase family protein YP_004295444.1 2441058 D 153948 CDS YP_004295445.1 325983043 10299012 complement(2441859..2442281) 1 NC_015222.1 PFAM: Stringent starvation protein B; KEGG: rsc:RCFBP_10526 stringent starvation protein B, ClpXP protease specificity-enhancing factor; stringent starvation protein B 2442281 10299012 NAL212_2477 Nitrosomonas sp. AL212 stringent starvation protein B YP_004295445.1 2441859 R 153948 CDS YP_004295446.1 325983044 10299013 complement(2442278..2442877) 1 NC_015222.1 PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: neu:NE0812 transcription modulator protein; glutathione S-transferase domain-containing protein 2442877 10299013 NAL212_2478 Nitrosomonas sp. AL212 glutathione S-transferase domain-containing protein YP_004295446.1 2442278 R 153948 CDS YP_004295447.1 325983045 10299014 complement(2442927..2443640) 1 NC_015222.1 PFAM: Cytochrome c1; KEGG: net:Neut_1112 cytochrome c1; cytochrome c1 2443640 10299014 NAL212_2479 Nitrosomonas sp. AL212 cytochrome c1 YP_004295447.1 2442927 R 153948 CDS YP_004295448.1 325983046 10299015 complement(2443645..2444892) 1 NC_015222.1 PFAM: Cytochrome b/b6, C-terminal; Cytochrome b/b6, N-terminal; KEGG: neu:NE0810 cytochrome b/b6; cytochrome b/b6 domain 2444892 10299015 NAL212_2480 Nitrosomonas sp. AL212 cytochrome b/b6 domain YP_004295448.1 2443645 R 153948 CDS YP_004295449.1 325983047 10299016 complement(2444893..2445504) 1 NC_015222.1 TIGRFAM: Ubiquinol-cytochrome c reductase, iron-sulphur subunit; KEGG: nmu:Nmul_A1005 ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; ubiquinol-cytochrome c reductase, iron-sulfur subunit 2445504 10299016 NAL212_2481 Nitrosomonas sp. AL212 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_004295449.1 2444893 R 153948 CDS YP_004295450.1 325983048 10299017 complement(2445722..2448454) 1 NC_015222.1 TIGRFAM: SecA protein; PFAM: SecA DEAD-like, N-terminal; SEC-C motif; SecA preprotein, cross-linking domain; SecA Wing/Scaffold; KEGG: nmu:Nmul_A2485 preprotein translocase subunit SecA; SMART: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; Preprotein translocase subunit SecA 2448454 10299017 NAL212_2482 Nitrosomonas sp. AL212 Preprotein translocase subunit SecA YP_004295450.1 2445722 R 153948 CDS YP_004295451.1 325983049 10299018 complement(2448676..2449599) 1 NC_015222.1 PFAM: Peptidase M23; KEGG: nmu:Nmul_A2486 peptidase M23B; peptidase M23 2449599 10299018 NAL212_2483 Nitrosomonas sp. AL212 peptidase M23 YP_004295451.1 2448676 R 153948 CDS YP_004295452.1 325983050 10299019 2449633..2450124 1 NC_015222.1 PFAM: Protein of unknown function DUF721/UPF0232; KEGG: nmu:Nmul_A2487 hypothetical protein; hypothetical protein 2450124 10299019 NAL212_2484 Nitrosomonas sp. AL212 hypothetical protein YP_004295452.1 2449633 D 153948 CDS YP_004295453.1 325983051 10299021 2450515..2451408 1 NC_015222.1 KEGG: ppr:PBPRB1378 hypothetical protein; hypothetical protein 2451408 10299021 NAL212_2486 Nitrosomonas sp. AL212 hypothetical protein YP_004295453.1 2450515 D 153948 CDS YP_004295454.1 325983052 10299022 2451746..2453602 1 NC_015222.1 KEGG: net:Neut_0498 ribonuclease II; PFAM: Ribonuclease II/R; SMART: Ribonuclease II/R; ribonuclease II 2453602 10299022 NAL212_2487 Nitrosomonas sp. AL212 ribonuclease II YP_004295454.1 2451746 D 153948 CDS YP_004295455.1 325983053 10299023 2453749..2454636 1 NC_015222.1 TIGRFAM: TonB, C-terminal; KEGG: neu:NE1626 putative TonB protein; TonB family protein 2454636 10299023 NAL212_2488 Nitrosomonas sp. AL212 TonB family protein YP_004295455.1 2453749 D 153948 CDS YP_004295456.1 325983054 10299024 2454696..2455514 1 NC_015222.1 KEGG: nmu:Nmul_A0538 shikimate 5-dehydrogenase; TIGRFAM: Shikimate dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; shikimate 5-dehydrogenase 2455514 10299024 NAL212_2489 Nitrosomonas sp. AL212 shikimate 5-dehydrogenase YP_004295456.1 2454696 D 153948 CDS YP_004295457.1 325983055 10299025 2455722..2457161 1 NC_015222.1 TIGRFAM: Divalent cation transporter; PFAM: Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core; MgtE magnesium transporter, integral membrane; KEGG: neu:NE1633 divalent cation transporter; SMART: Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core; magnesium transporter 2457161 10299025 NAL212_2490 Nitrosomonas sp. AL212 magnesium transporter YP_004295457.1 2455722 D 153948 CDS YP_004295458.1 325983056 10299026 complement(2457257..2458513) 1 NC_015222.1 PFAM: Glycosyl transferase, family 8; KEGG: eba:ebA1583 hypothetical protein; glycosyl transferase family protein 2458513 10299026 NAL212_2491 Nitrosomonas sp. AL212 glycosyl transferase family protein YP_004295458.1 2457257 R 153948 CDS YP_004295459.1 325983057 10299027 complement(2458521..2460146) 1 NC_015222.1 PFAM: Glycosyl transferase, group 1; KEGG: dsh:Dshi_4121 glycosyl transferase family protein; group 1 glycosyl transferase 2460146 10299027 NAL212_2492 Nitrosomonas sp. AL212 group 1 glycosyl transferase YP_004295459.1 2458521 R 153948 CDS YP_004295460.1 325983058 10299028 complement(2460139..2462127) 1 NC_015222.1 PFAM: Methyltransferase type 12; KEGG: neu:NE0484 hypothetical protein; type 12 methyltransferase 2462127 10299028 NAL212_2493 Nitrosomonas sp. AL212 type 12 methyltransferase YP_004295460.1 2460139 R 153948 CDS YP_004295461.1 325983059 10299029 complement(2462127..2463470) 1 NC_015222.1 PFAM: ABC transporter-like; KEGG: neu:NE0483 polysaccharide ABC transporter ATPase; SMART: ATPase, AAA+ type, core; teichoic-acid-transporting AtPase 2463470 10299029 NAL212_2494 Nitrosomonas sp. AL212 teichoic-acid-transporting AtPase YP_004295461.1 2462127 R 153948 CDS YP_004295462.1 325983060 10299030 complement(2463460..2464287) 1 NC_015222.1 PFAM: ABC-2 type transporter; KEGG: mes:Meso_3693 ABC-2 type transporter; ABC transporter 2464287 10299030 NAL212_2495 Nitrosomonas sp. AL212 ABC transporter YP_004295462.1 2463460 R 153948 CDS YP_004295463.1 325983061 10299031 2464331..2464510 1 NC_015222.1 KEGG: tps:THAPSDRAFT_12125 hypothetical protein; hypothetical protein 2464510 10299031 NAL212_2496 Nitrosomonas sp. AL212 hypothetical protein YP_004295463.1 2464331 D 153948 CDS YP_004295464.1 325983062 10299032 2464880..2465068 1 NC_015222.1 manually curated; KEGG: xop:PXO_04569 putative transposase; putative transposase 2465068 10299032 NAL212_2497 Nitrosomonas sp. AL212 putative transposase YP_004295464.1 2464880 D 153948 CDS YP_004295465.1 325983063 10299033 complement(2465188..2466489) 1 NC_015222.1 KEGG: nmu:Nmul_A2758 major facilitator transporter; major facilitator transporter 2466489 10299033 NAL212_2498 Nitrosomonas sp. AL212 major facilitator transporter YP_004295465.1 2465188 R 153948 CDS YP_004295466.1 325983064 10299034 complement(2466523..2467908) 1 NC_015222.1 TIGRFAM: Fumarate hydratase, class II; KEGG: nmu:Nmul_A2471 fumarate hydratase; PFAM: Lyase 1, N-terminal; Fumarase C, C-terminal; class II fumarate hydratase 2467908 10299034 NAL212_2499 Nitrosomonas sp. AL212 class II fumarate hydratase YP_004295466.1 2466523 R 153948 CDS YP_004295467.1 325983065 10299035 complement(2468358..2468690) 1 NC_015222.1 KEGG: net:Neut_1998 transcriptional regulator, XRE family protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 2468690 10299035 NAL212_2500 Nitrosomonas sp. AL212 helix-turn-helix domain-containing protein YP_004295467.1 2468358 R 153948 CDS YP_004295468.1 325983066 10299036 complement(2468674..2468931) 1 NC_015222.1 PFAM: Plasmid stabilisation system; KEGG: nhl:Nhal_1008 phage protein; plasmid stabilization system 2468931 10299036 NAL212_2501 Nitrosomonas sp. AL212 plasmid stabilization system YP_004295468.1 2468674 R 153948 CDS YP_004295469.1 325983067 10299037 complement(2468995..2469099) 1 NC_015222.1 KEGG: aci:ACIAD1890 fumarate hydratase; fumarate hydratase 2469099 10299037 NAL212_2502 Nitrosomonas sp. AL212 fumarate hydratase YP_004295469.1 2468995 R 153948 CDS YP_004295470.1 325983068 10299038 complement(2469258..2469614) 1 NC_015222.1 KEGG: cja:CJA_0812 hypothetical protein; hypothetical protein 2469614 10299038 NAL212_2503 Nitrosomonas sp. AL212 hypothetical protein YP_004295470.1 2469258 R 153948 CDS YP_004295471.1 325983069 10299039 complement(2469618..2470208) 1 NC_015222.1 KEGG: swd:Swoo_4501 hypothetical protein; hypothetical protein 2470208 10299039 NAL212_2504 Nitrosomonas sp. AL212 hypothetical protein YP_004295471.1 2469618 R 153948 CDS YP_004295472.1 325983070 10299040 complement(2470299..2471444) 1 NC_015222.1 KEGG: nmu:Nmul_A2469 ribonucleotide-diphosphate reductase subunit beta; PFAM: Ribonucleotide reductase; ribonucleoside-diphosphate reductase 2471444 10299040 NAL212_2505 Nitrosomonas sp. AL212 ribonucleoside-diphosphate reductase YP_004295472.1 2470299 R 153948 CDS YP_004295473.1 325983071 10299041 complement(2471474..2474338) 1 NC_015222.1 KEGG: nmu:Nmul_A2468 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ATP-cone; ribonucleoside-diphosphate reductase subunit alpha 2474338 10299041 NAL212_2506 Nitrosomonas sp. AL212 ribonucleoside-diphosphate reductase subunit alpha YP_004295473.1 2471474 R 153948 CDS YP_004295474.1 325983072 10299042 complement(2474702..2475145) 1 NC_015222.1 PFAM: Protein of unknown function DUF188; KEGG: tgr:Tgr7_2584 protein of unknown function DUF188; hypothetical protein 2475145 10299042 NAL212_2507 Nitrosomonas sp. AL212 hypothetical protein YP_004295474.1 2474702 R 153948 CDS YP_004295475.1 325983073 10299043 complement(2475166..2475759) 1 NC_015222.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: neu:NE2127 CDP-diacylglycerol--glycerol-3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 2475759 10299043 NAL212_2508 Nitrosomonas sp. AL212 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase YP_004295475.1 2475166 R 153948 CDS YP_004295476.1 325983074 10299044 complement(2475792..2477609) 1 NC_015222.1 KEGG: nmu:Nmul_A1271 excinuclease ABC subunit C; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; Helix-hairpin-helix motif; manually curated; TIGRFAM: Excinuclease ABC, C subunit; SMART: Excinuclease ABC, C subunit, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; HAMAP: Excinuclease ABC, C subunit; UvrABC system protein C 2477609 10299044 NAL212_2509 Nitrosomonas sp. AL212 UvrABC system protein C YP_004295476.1 2475792 R 153948 CDS YP_004295477.1 325983075 10299045 complement(2477615..2477803) 1 NC_015222.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: neu:NE0932 putative isomerase; 4-oxalocrotonate tautomerase 2477803 10299045 NAL212_2510 Nitrosomonas sp. AL212 4-oxalocrotonate tautomerase YP_004295477.1 2477615 R 153948 CDS YP_004295478.1 325983076 10299046 complement(2477829..2478503) 1 NC_015222.1 PFAM: Uracil-DNA glycosylase-like; KEGG: net:Neut_1410 uracil-DNA glycosylase superfamily protein; uracil-DNA glycosylase superfamily protein 2478503 10299046 NAL212_2511 Nitrosomonas sp. AL212 uracil-DNA glycosylase superfamily protein YP_004295478.1 2477829 R 153948 CDS YP_004295479.1 325983077 10299050 complement(2479345..2479938) 1 NC_015222.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sun:SUN_1448 phosphatidylglycerophosphate synthase; CDP-alcohol phosphatidyltransferase 2479938 10299050 NAL212_2512 Nitrosomonas sp. AL212 CDP-alcohol phosphatidyltransferase YP_004295479.1 2479345 R 153948 CDS YP_004295480.1 325983078 10299051 complement(2479954..2480442) 1 NC_015222.1 PFAM: Uncharacterised protein family UPF0290; KEGG: hch:HCH_02040 CDP-diglyceride synthetase; hypothetical protein 2480442 10299051 NAL212_2513 Nitrosomonas sp. AL212 hypothetical protein YP_004295480.1 2479954 R 153948 CDS YP_004295481.1 325983079 10299052 2480513..2481265 1 NC_015222.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: nmu:Nmul_A0606 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 2481265 10299052 NAL212_2514 Nitrosomonas sp. AL212 endonuclease/exonuclease/phosphatase YP_004295481.1 2480513 D 153948 CDS YP_004295482.1 325983080 10299053 complement(2481268..2483682) 1 NC_015222.1 SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: nmu:Nmul_A2338 ATP-dependent protease La; PFAM: Peptidase S16, Lon C-terminal; ATPase, AAA-type, core; Peptidase S16, lon N-terminal; anti-sigma H sporulation factor LonB 2483682 10299053 NAL212_2515 Nitrosomonas sp. AL212 anti-sigma H sporulation factor LonB YP_004295482.1 2481268 R 153948 CDS YP_004295483.1 325983081 10299054 complement(2483822..2485099) 1 NC_015222.1 TIGRFAM: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase, AAA-2; Clp ATPase, C-terminal; Zinc finger, C4-type; KEGG: nmu:Nmul_A2339 ATP-dependent protease ATP-binding subunit ClpX; SMART: ATPase, AAA+ type, core; ATP-dependent Clp protease ATP-binding subunit ClpX 2485099 10299054 NAL212_2516 Nitrosomonas sp. AL212 ATP-dependent Clp protease ATP-binding subunit ClpX YP_004295483.1 2483822 R 153948 CDS YP_004295484.1 325983082 10299055 complement(2485164..2485805) 1 NC_015222.1 TIGRFAM: Peptidase S14, ClpP; KEGG: nmu:Nmul_A2340 ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: Peptidase S14, ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 2485805 10299055 NAL212_2517 Nitrosomonas sp. AL212 ATP-dependent Clp protease, proteolytic subunit ClpP YP_004295484.1 2485164 R 153948 CDS YP_004295485.1 325983083 10299056 complement(2485807..2487111) 1 NC_015222.1 KEGG: nmu:Nmul_A2341 trigger factor; TIGRFAM: Trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Trigger factor, C-terminal, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type; trigger factor 2487111 10299056 NAL212_2518 Nitrosomonas sp. AL212 trigger factor YP_004295485.1 2485807 R 153948 CDS YP_004295486.1 325983084 10299058 complement(2487365..2488111) 1 NC_015222.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nmu:Nmul_A2342 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2488111 10299058 NAL212_2519 Nitrosomonas sp. AL212 short-chain dehydrogenase/reductase SDR YP_004295486.1 2487365 R 153948 CDS YP_004295487.1 325983085 10299059 complement(2488266..2489915) 1 NC_015222.1 KEGG: nmu:Nmul_A2344 chaperonin GroEL; TIGRFAM: Chaperonin Cpn60; PFAM: Chaperonin Cpn60/TCP-1; chaperonin GroEL 2489915 10299059 NAL212_2520 Nitrosomonas sp. AL212 chaperonin GroEL YP_004295487.1 2488266 R 153948 CDS YP_004295488.1 325983086 10299060 complement(2489969..2490259) 1 NC_015222.1 KEGG: nmu:Nmul_A2345 co-chaperonin GroES; PFAM: Chaperonin Cpn10; SMART: Chaperonin Cpn10; chaperonin Cpn10 2490259 10299060 NAL212_2521 Nitrosomonas sp. AL212 chaperonin Cpn10 YP_004295488.1 2489969 R 153948 CDS YP_004295489.1 325983087 10299061 2490608..2490907 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: rms:RMA_0745 transposase; transposase IS3/IS911 family protein 2490907 10299061 NAL212_2522 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004295489.1 2490608 D 153948 CDS YP_004295490.1 325983088 10299062 2490939..2492093 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region; integrase catalytic region 2492093 10299062 NAL212_2523 Nitrosomonas sp. AL212 integrase catalytic region YP_004295490.1 2490939 D 153948 CDS YP_004295491.1 325983089 10299063 2492135..2492998 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: net:Neut_2192 integrase catalytic subunit; integrase catalytic region 2492998 10299063 NAL212_2524 Nitrosomonas sp. AL212 integrase catalytic region YP_004295491.1 2492135 D 153948 CDS YP_004295492.1 325983090 10299065 2493404..2494024 1 NC_015222.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: mmb:Mmol_0462 peptidase S24 and S26 domain protein; peptidase S24/S26A/S26B, conserved region 2494024 10299065 NAL212_2526 Nitrosomonas sp. AL212 peptidase S24/S26A/S26B, conserved region YP_004295492.1 2493404 D 153948 CDS YP_004295493.1 325983091 10299066 2494021..2495412 1 NC_015222.1 SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: mei:Msip34_2797 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; DNA polymerase III subunit epsilon 2495412 10299066 NAL212_2527 Nitrosomonas sp. AL212 DNA polymerase III subunit epsilon YP_004295493.1 2494021 D 153948 CDS YP_004295494.1 325983092 10299067 2495405..2496700 1 NC_015222.1 KEGG: rcu:RCOM_1869020 uv inducible DNA polymerase umuc / mucb, putative; PFAM: DNA-repair protein, UmuC-like; DNA-directed DNA polymerase 2496700 10299067 NAL212_2528 Nitrosomonas sp. AL212 DNA-directed DNA polymerase YP_004295494.1 2495405 D 153948 CDS YP_004295495.1 325983093 10299068 complement(2497016..2497432) 1 NC_015222.1 KEGG: tva:TVAG_358270 hypothetical protein; hypothetical protein 2497432 10299068 NAL212_2529 Nitrosomonas sp. AL212 hypothetical protein YP_004295495.1 2497016 R 153948 CDS YP_004295496.1 325983094 10299069 complement(2497435..2497740) 1 NC_015222.1 KEGG: acp:A2cp1_0062 hypothetical protein; hypothetical protein 2497740 10299069 NAL212_2530 Nitrosomonas sp. AL212 hypothetical protein YP_004295496.1 2497435 R 153948 CDS YP_004295497.1 325983095 10299070 complement(2498286..2499107) 1 NC_015222.1 KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 2499107 10299070 NAL212_2531 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004295497.1 2498286 R 153948 CDS YP_004295498.1 325983096 10299071 complement(2499100..2500629) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: swi:Swit_4958 transposase; integrase catalytic region 2500629 10299071 NAL212_2532 Nitrosomonas sp. AL212 integrase catalytic region YP_004295498.1 2499100 R 153948 CDS YP_004295499.1 325983097 10299072 complement(2501019..2502602) 1 NC_015222.1 PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase; transposase IS66 2502602 10299072 NAL212_2533 Nitrosomonas sp. AL212 transposase IS66 YP_004295499.1 2501019 R 153948 CDS YP_004295500.1 325983098 10299073 complement(2502656..2503006) 1 NC_015222.1 KEGG: eba:ebB55 transposase, fragment; manually curated; PFAM: Transposase (putative), IS66 Orf2-like; IS66 Orf2 family protein 2503006 10299073 NAL212_2534 Nitrosomonas sp. AL212 IS66 Orf2 family protein YP_004295500.1 2502656 R 153948 CDS YP_004295501.1 325983099 10299074 complement(2502994..2503290) 1 NC_015222.1 KEGG: dat:HRM2_44620 hypothetical protein; hypothetical protein 2503290 10299074 NAL212_2535 Nitrosomonas sp. AL212 hypothetical protein YP_004295501.1 2502994 R 153948 CDS YP_004295502.1 325983100 10299075 complement(2503455..2503652) 1 NC_015222.1 KEGG: eba:ebA808 hypothetical protein; hypothetical protein 2503652 10299075 NAL212_2536 Nitrosomonas sp. AL212 hypothetical protein YP_004295502.1 2503455 R 153948 CDS YP_004295503.1 325983101 10299076 complement(2503657..2504061) 1 NC_015222.1 KEGG: dac:Daci_1630 hypothetical protein; hypothetical protein 2504061 10299076 NAL212_2537 Nitrosomonas sp. AL212 hypothetical protein YP_004295503.1 2503657 R 153948 CDS YP_004295504.1 325983102 10299077 complement(2504309..2505439) 1 NC_015222.1 KEGG: cdf:CDP04 putative phage capsid protein; hypothetical protein 2505439 10299077 NAL212_2538 Nitrosomonas sp. AL212 hypothetical protein YP_004295504.1 2504309 R 153948 CDS YP_004295505.1 325983103 10299078 complement(2505679..2505972) 1 NC_015222.1 KEGG: aag:AaeL_AAEL006891 prickle; hypothetical protein 2505972 10299078 NAL212_2539 Nitrosomonas sp. AL212 hypothetical protein YP_004295505.1 2505679 R 153948 CDS YP_004295506.1 325983104 10299079 complement(2505972..2506607) 1 NC_015222.1 KEGG: meh:M301_1151 hypothetical protein; hypothetical protein 2506607 10299079 NAL212_2540 Nitrosomonas sp. AL212 hypothetical protein YP_004295506.1 2505972 R 153948 CDS YP_004295507.1 325983105 10299080 complement(2506604..2508013) 1 NC_015222.1 PFAM: ParB-like nuclease; KEGG: sus:Acid_1672 hypothetical protein; ParB domain-containing protein nuclease 2508013 10299080 NAL212_2541 Nitrosomonas sp. AL212 ParB domain-containing protein nuclease YP_004295507.1 2506604 R 153948 CDS YP_004295508.1 325983106 10299081 complement(2508010..2508327) 1 NC_015222.1 KEGG: rpf:Rpic12D_3450 hypothetical protein; hypothetical protein 2508327 10299081 NAL212_2542 Nitrosomonas sp. AL212 hypothetical protein YP_004295508.1 2508010 R 153948 CDS YP_004295509.1 325983107 10299082 complement(2508327..2508557) 1 NC_015222.1 PFAM: Prophage CP4-57 regulatory; KEGG: gca:Galf_2036 phage transcriptional regulator, AlpA; prophage CP4-57 regulatory 2508557 10299082 NAL212_2543 Nitrosomonas sp. AL212 prophage CP4-57 regulatory YP_004295509.1 2508327 R 153948 CDS YP_004295510.1 325983108 10299083 complement(2508685..2509335) 1 NC_015222.1 KEGG: pfh:PFHG_01564 conserved hypothetical protein; hypothetical protein 2509335 10299083 NAL212_2544 Nitrosomonas sp. AL212 hypothetical protein YP_004295510.1 2508685 R 153948 CDS YP_004295511.1 325983109 10299084 complement(2509335..2510591) 1 NC_015222.1 PFAM: Integrase, catalytic core, phage; KEGG: cvi:CV_0651 prophage CP4-like integrase; integrase family protein 2510591 10299084 NAL212_2545 Nitrosomonas sp. AL212 integrase family protein YP_004295511.1 2509335 R 153948 CDS YP_004295512.1 325983110 10299086 2511508..2512473 1 NC_015222.1 KEGG: dar:Daro_1081 magnesium/cobalt transporter CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; magnesium and cobalt transport protein CorA 2512473 10299086 NAL212_2546 Nitrosomonas sp. AL212 magnesium and cobalt transport protein CorA YP_004295512.1 2511508 D 153948 CDS YP_004295513.1 325983111 10299087 complement(2512633..2513712) 1 NC_015222.1 KEGG: nmu:Nmul_A2243 tRNA-specific 2-thiouridylase MnmA; TIGRFAM: tRNA-specific 2-thiouridylase; PFAM: tRNA-specific 2-thiouridylase; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2513712 10299087 NAL212_2547 Nitrosomonas sp. AL212 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_004295513.1 2512633 R 153948 CDS YP_004295514.1 325983112 10299088 complement(2513717..2514172) 1 NC_015222.1 PFAM: NUDIX hydrolase domain; KEGG: nmu:Nmul_A2244 NUDIX hydrolase; NUDIX hydrolase 2514172 10299088 NAL212_2548 Nitrosomonas sp. AL212 NUDIX hydrolase YP_004295514.1 2513717 R 153948 CDS YP_004295515.1 325983113 10299090 complement(2515544..2515801) 1 NC_015222.1 PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: avn:Avin_38450 hypothetical protein; Nicotinamide mononucleotide transporter PnuC 2515801 10299090 NAL212_2550 Nitrosomonas sp. AL212 Nicotinamide mononucleotide transporter PnuC YP_004295515.1 2515544 R 153948 CDS YP_004295516.1 325983114 10299091 complement(2515959..2516294) 1 NC_015222.1 KEGG: mca:MCA1082 hypothetical protein; hypothetical protein 2516294 10299091 NAL212_2551 Nitrosomonas sp. AL212 hypothetical protein YP_004295516.1 2515959 R 153948 CDS YP_004295517.1 325983115 10299092 2516550..2516795 1 NC_015222.1 KEGG: spu:575561 hypothetical LOC575561; hypothetical protein 2516795 10299092 NAL212_2552 Nitrosomonas sp. AL212 hypothetical protein YP_004295517.1 2516550 D 153948 CDS YP_004295518.1 325983116 10299093 2517192..2517482 1 NC_015222.1 KEGG: cel:R144.2 hypothetical protein; hypothetical protein 2517482 10299093 NAL212_2553 Nitrosomonas sp. AL212 hypothetical protein YP_004295518.1 2517192 D 153948 CDS YP_004295519.1 325983117 10299094 complement(2517615..2521373) 1 NC_015222.1 TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated domain; Helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Domain of unknown function DUF1605; KEGG: nmu:Nmul_A1393 ATP-dependent helicase HrpA; SMART: Helicase-associated domain; DEAD-like helicase, N-terminal; Helicase, C-terminal; ATPase, AAA+ type, core; ATP-dependent helicase HrpA 2521373 10299094 NAL212_2554 Nitrosomonas sp. AL212 ATP-dependent helicase HrpA YP_004295519.1 2517615 R 153948 CDS YP_004295520.1 325983118 10299095 2521757..2521963 1 NC_015222.1 KEGG: swo:Swol_1551 hypothetical protein; TIGRFAM: Addiction module component, CHP02574; PFAM: Addiction module component, CHP02574; addiction module protein 2521963 10299095 NAL212_2555 Nitrosomonas sp. AL212 addiction module protein YP_004295520.1 2521757 D 153948 CDS YP_004295521.1 325983119 10299096 2521963..2522259 1 NC_015222.1 PFAM: Plasmid stabilisation system; KEGG: pph:Ppha_1705 plasmid stabilization system; plasmid stabilization system 2522259 10299096 NAL212_2556 Nitrosomonas sp. AL212 plasmid stabilization system YP_004295521.1 2521963 D 153948 CDS YP_004295522.1 325983120 10299097 complement(2522351..2524135) 1 NC_015222.1 PFAM: Protein of unknown function DUF2081; Domain of unknown function DUF262; KEGG: slp:Slip_0088 protein of unknown function DUF2081; hypothetical protein 2524135 10299097 NAL212_2557 Nitrosomonas sp. AL212 hypothetical protein YP_004295522.1 2522351 R 153948 CDS YP_004295523.1 325983121 10299099 2524857..2525177 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2525177 10299099 NAL212_2559 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004295523.1 2524857 D 153948 CDS YP_004295524.1 325983122 10299101 2526066..2526212 1 NC_015222.1 hypothetical protein 2526212 10299101 NAL212_2561 Nitrosomonas sp. AL212 hypothetical protein YP_004295524.1 2526066 D 153948 CDS YP_004295525.1 325983123 10299102 2526509..2527018 1 NC_015222.1 KEGG: mbu:Mbur_1706 hypothetical protein; hypothetical protein 2527018 10299102 NAL212_2562 Nitrosomonas sp. AL212 hypothetical protein YP_004295525.1 2526509 D 153948 CDS YP_004295526.1 325983124 10299103 2527096..2527512 1 NC_015222.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mem:Memar_2271 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2527512 10299103 NAL212_2563 Nitrosomonas sp. AL212 glyoxalase/bleomycin resistance protein/dioxygenase YP_004295526.1 2527096 D 153948 CDS YP_004295527.1 325983125 10299104 2527499..2527813 1 NC_015222.1 PFAM: TfoX, C-terminal; KEGG: cpb:Cphamn1_2250 TfoX domain protein; TfoX domain-containing protein 2527813 10299104 NAL212_2564 Nitrosomonas sp. AL212 TfoX domain-containing protein YP_004295527.1 2527499 D 153948 CDS YP_004295528.1 325983126 10299105 2527864..2528346 1 NC_015222.1 KEGG: lbz:LbrM24_V2.1470 hypothetical protein; hypothetical protein 2528346 10299105 NAL212_2565 Nitrosomonas sp. AL212 hypothetical protein YP_004295528.1 2527864 D 153948 CDS YP_004295529.1 325983127 10299106 complement(2528311..2528430) 1 NC_015222.1 hypothetical protein 2528430 10299106 NAL212_2566 Nitrosomonas sp. AL212 hypothetical protein YP_004295529.1 2528311 R 153948 CDS YP_004295530.1 325983128 10299107 2528581..2528994 1 NC_015222.1 KEGG: lpa:lpa_00291 hypothetical protein; PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like); nuclease (SNase domain-containing protein) 2528994 10299107 NAL212_2567 Nitrosomonas sp. AL212 nuclease (SNase domain-containing protein) YP_004295530.1 2528581 D 153948 CDS YP_004295531.1 325983129 10299108 complement(2529176..2529784) 1 NC_015222.1 PFAM: Glutathione S-transferase, C-terminal; KEGG: mmb:Mmol_1943 glutathione S-transferase domain protein; glutathione S-transferase domain-containing protein 2529784 10299108 NAL212_2568 Nitrosomonas sp. AL212 glutathione S-transferase domain-containing protein YP_004295531.1 2529176 R 153948 CDS YP_004295532.1 325983130 10299109 complement(2529815..2530594) 1 NC_015222.1 KEGG: slt:Slit_2005 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; heat shock protein DnaJ domain-containing protein 2530594 10299109 NAL212_2569 Nitrosomonas sp. AL212 heat shock protein DnaJ domain-containing protein YP_004295532.1 2529815 R 153948 CDS YP_004295533.1 325983131 10299110 complement(2530678..2530923) 1 NC_015222.1 PFAM: BolA protein; KEGG: nmu:Nmul_A2742 BolA-like protein; BolA family protein 2530923 10299110 NAL212_2570 Nitrosomonas sp. AL212 BolA family protein YP_004295533.1 2530678 R 153948 CDS YP_004295534.1 325983132 10299111 complement(2530972..2531727) 1 NC_015222.1 PFAM: ABC-2 type transporter; KEGG: nmu:Nmul_A2743 hypothetical protein; ABC transporter 2531727 10299111 NAL212_2571 Nitrosomonas sp. AL212 ABC transporter YP_004295534.1 2530972 R 153948 CDS YP_004295535.1 325983133 10299112 complement(2531724..2532641) 1 NC_015222.1 PFAM: ABC transporter-like; KEGG: nmu:Nmul_A2744 ABC transporter related; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 2532641 10299112 NAL212_2572 Nitrosomonas sp. AL212 sulfate-transporting ATPase YP_004295535.1 2531724 R 153948 CDS YP_004295536.1 325983134 10299113 complement(2532689..2533039) 1 NC_015222.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: nmu:Nmul_A2745 anti-sigma-factor antagonist domain-containing protein; sulfate transporter/antisigma-factor antagonist STAS 2533039 10299113 NAL212_2573 Nitrosomonas sp. AL212 sulfate transporter/antisigma-factor antagonist STAS YP_004295536.1 2532689 R 153948 CDS YP_004295537.1 325983135 10299114 complement(2533042..2533662) 1 NC_015222.1 PFAM: Toluene tolerance Ttg2; KEGG: net:Neut_0854 toluene tolerance family protein; toluene tolerance family protein 2533662 10299114 NAL212_2574 Nitrosomonas sp. AL212 toluene tolerance family protein YP_004295537.1 2533042 R 153948 CDS YP_004295538.1 325983136 10299115 complement(2533883..2534350) 1 NC_015222.1 PFAM: Mammalian cell entry-related; KEGG: nmu:Nmul_A2747 hypothetical protein; mammalian cell entry domain-containing protein 2534350 10299115 NAL212_2575 Nitrosomonas sp. AL212 mammalian cell entry domain-containing protein YP_004295538.1 2533883 R 153948 CDS YP_004295539.1 325983137 10299116 complement(2534350..2535147) 1 NC_015222.1 KEGG: nmu:Nmul_A2748 hypothetical protein; TIGRFAM: Domain of unknown function DUF140; PFAM: Domain of unknown function DUF140; hypothetical protein 2535147 10299116 NAL212_2576 Nitrosomonas sp. AL212 hypothetical protein YP_004295539.1 2534350 R 153948 CDS YP_004295540.1 325983138 10299117 complement(2535140..2535952) 1 NC_015222.1 PFAM: ABC transporter-like; KEGG: nmu:Nmul_A2749 ABC transporter related; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 2535952 10299117 NAL212_2577 Nitrosomonas sp. AL212 sulfate-transporting ATPase YP_004295540.1 2535140 R 153948 CDS YP_004295541.1 325983139 10299118 2536292..2537143 1 NC_015222.1 KEGG: net:Neut_0850 nuclease; PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like); nuclease (SNase domain-containing protein) 2537143 10299118 NAL212_2578 Nitrosomonas sp. AL212 nuclease (SNase domain-containing protein) YP_004295541.1 2536292 D 153948 CDS YP_004295542.1 325983140 10299119 complement(2537208..2538515) 1 NC_015222.1 KEGG: neu:NE1533 putative aminopeptidase 2; PFAM: Peptidase M18; aspartyl aminopeptidase 2538515 10299119 NAL212_2579 Nitrosomonas sp. AL212 aspartyl aminopeptidase YP_004295542.1 2537208 R 153948 CDS YP_004295543.1 325983141 10299120 2539029..2542559 1 NC_015222.1 PFAM: Haemolysin-type calcium-binding repeat; KEGG: pde:Pden_0560 hemolysin-type calcium-binding region; hemolysin-type calcium-binding protein 2542559 10299120 NAL212_2580 Nitrosomonas sp. AL212 hemolysin-type calcium-binding protein YP_004295543.1 2539029 D 153948 CDS YP_004295544.1 325983142 10299121 complement(2542686..2543984) 1 NC_015222.1 KEGG: net:Neut_1381 cytochrome c, class I; PFAM: Cytochrome c, class I; gluconate 2-dehydrogenase 2543984 10299121 NAL212_2581 Nitrosomonas sp. AL212 gluconate 2-dehydrogenase YP_004295544.1 2542686 R 153948 CDS YP_004295545.1 325983143 10299122 complement(2543981..2544691) 1 NC_015222.1 PFAM: Cytochrome c, class I; KEGG: neu:NE0904 cytochrome c; cytochrome c class I 2544691 10299122 NAL212_2582 Nitrosomonas sp. AL212 cytochrome c class I YP_004295545.1 2543981 R 153948 CDS YP_004295546.1 325983144 10299123 2545073..2546086 1 NC_015222.1 PFAM: Sodium/calcium exchanger membrane region; KEGG: mca:MCA0850 cation transporter, putative; sodium/calcium exchanger membrane region 2546086 10299123 NAL212_2583 Nitrosomonas sp. AL212 sodium/calcium exchanger membrane region YP_004295546.1 2545073 D 153948 CDS YP_004295547.1 325983145 10299124 complement(2546098..2548815) 1 NC_015222.1 SMART: ATPase, P-type cation-transporter, N-terminal; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: slt:Slit_2864 ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: ATPase, P-type, ATPase-associated domain; ATPase, P-type cation-transporter, C-terminal; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; P-type HAD superfamily ATPase 2548815 10299124 NAL212_2584 Nitrosomonas sp. AL212 P-type HAD superfamily ATPase YP_004295547.1 2546098 R 153948 CDS YP_004295548.1 325983146 10299125 2548940..2549452 1 NC_015222.1 PFAM: Beta-lactamase hydrolase-like; KEGG: net:Neut_1090 hypothetical protein; beta-lactamase hydrolase-family protein 2549452 10299125 NAL212_2585 Nitrosomonas sp. AL212 beta-lactamase hydrolase-family protein YP_004295548.1 2548940 D 153948 CDS YP_004295549.1 325983147 10299126 2549523..2550005 1 NC_015222.1 KEGG: mhu:Mhun_1175 methyl-accepting chemotaxis sensory transducer; hypothetical protein 2550005 10299126 NAL212_2586 Nitrosomonas sp. AL212 hypothetical protein YP_004295549.1 2549523 D 153948 CDS YP_004295550.1 325983148 10299127 complement(2550194..2551024) 1 NC_015222.1 PFAM: Protein of unknown function DUF81; KEGG: rpf:Rpic12D_1707 protein of unknown function DUF81; hypothetical protein 2551024 10299127 NAL212_2587 Nitrosomonas sp. AL212 hypothetical protein YP_004295550.1 2550194 R 153948 CDS YP_004295551.1 325983149 10299128 complement(2551031..2552635) 1 NC_015222.1 KEGG: neu:NE2567 hypothetical protein; TIGRFAM: Beta-lactamase hydrolase-like; PFAM: Beta-lactamase hydrolase-like; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; beta-lactamase hydrolase-family protein 2552635 10299128 NAL212_2588 Nitrosomonas sp. AL212 beta-lactamase hydrolase-family protein YP_004295551.1 2551031 R 153948 CDS YP_004295552.1 325983150 10299129 complement(2552749..2553075) 1 NC_015222.1 KEGG: neu:NE2568 ArsR family regulatory protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 2553075 10299129 NAL212_2589 Nitrosomonas sp. AL212 regulatory protein ArsR YP_004295552.1 2552749 R 153948 CDS YP_004295553.1 325983151 10299130 complement(2553179..2553595) 1 NC_015222.1 PFAM: Domain of unknown function DUF395, YeeE/YedE; KEGG: nmu:Nmul_A1684 YeeE/YedE; hypothetical protein 2553595 10299130 NAL212_2590 Nitrosomonas sp. AL212 hypothetical protein YP_004295553.1 2553179 R 153948 CDS YP_004295554.1 325983152 10299131 complement(2553629..2554057) 1 NC_015222.1 KEGG: nmu:Nmul_A1685 YeeE/YedE; manually curated; PFAM: Domain of unknown function DUF395, YeeE/YedE; hypothetical protein 2554057 10299131 NAL212_2591 Nitrosomonas sp. AL212 hypothetical protein YP_004295554.1 2553629 R 153948 CDS YP_004295555.1 325983153 10299132 2554187..2555047 1 NC_015222.1 KEGG: nmu:Nmul_A1686 beta-lactamase-like; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; beta-lactamase domain-containing protein 2555047 10299132 NAL212_2592 Nitrosomonas sp. AL212 beta-lactamase domain-containing protein YP_004295555.1 2554187 D 153948 CDS YP_004295556.1 325983154 10299133 complement(2555135..2556145) 1 NC_015222.1 KEGG: mga:MGA_1131 DnaJ-like molecular chaperone; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; heat shock protein DnaJ domain-containing protein 2556145 10299133 NAL212_2593 Nitrosomonas sp. AL212 heat shock protein DnaJ domain-containing protein YP_004295556.1 2555135 R 153948 CDS YP_004295557.1 325983155 10299134 2556406..2556591 1 NC_015222.1 PFAM: Hemin uptake protein HemP; KEGG: neu:NE1541 hypothetical protein; hemin uptake protein HemP 2556591 10299134 NAL212_2594 Nitrosomonas sp. AL212 hemin uptake protein HemP YP_004295557.1 2556406 D 153948 CDS YP_004295558.1 325983156 10299135 2556838..2557302 1 NC_015222.1 KEGG: neu:NE0863 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein; bacterioferritin 2557302 10299135 NAL212_2595 Nitrosomonas sp. AL212 bacterioferritin YP_004295558.1 2556838 D 153948 CDS YP_004295559.1 325983157 10299136 2557421..2558068 1 NC_015222.1 KEGG: nmu:Nmul_A2395 hypothetical protein; hypothetical protein 2558068 10299136 NAL212_2596 Nitrosomonas sp. AL212 hypothetical protein YP_004295559.1 2557421 D 153948 CDS YP_004295560.1 325983158 10299137 2558215..2559744 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: swi:Swit_4958 transposase; integrase catalytic region 2559744 10299137 NAL212_2597 Nitrosomonas sp. AL212 integrase catalytic region YP_004295560.1 2558215 D 153948 CDS YP_004295561.1 325983159 10299138 2559737..2560558 1 NC_015222.1 KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 2560558 10299138 NAL212_2598 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004295561.1 2559737 D 153948 CDS YP_004295562.1 325983160 10299141 complement(2562014..2562451) 1 NC_015222.1 PFAM: Transposase IS200-like; KEGG: xne:XNC1_2829 transposase (fragment); transposase IS200-family protein 2562451 10299141 NAL212_2601 Nitrosomonas sp. AL212 transposase IS200-family protein YP_004295562.1 2562014 R 153948 CDS YP_004295563.1 325983161 10299142 complement(2562780..2563349) 1 NC_015222.1 KEGG: nmu:Nmul_A2762 hypothetical protein; hypothetical protein 2563349 10299142 NAL212_2602 Nitrosomonas sp. AL212 hypothetical protein YP_004295563.1 2562780 R 153948 CDS YP_004295564.1 325983162 10299143 complement(2563417..2564004) 1 NC_015222.1 KEGG: nmu:Nmul_A1398 hypothetical protein; hypothetical protein 2564004 10299143 NAL212_2603 Nitrosomonas sp. AL212 hypothetical protein YP_004295564.1 2563417 R 153948 CDS YP_004295565.1 325983163 10299144 complement(2564165..2565427) 1 NC_015222.1 KEGG: nmu:Nmul_A2764 monooxygenase subunit B protein; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit B; methane monooxygenase/ammonia monooxygenase subunit B 2565427 10299144 NAL212_2604 Nitrosomonas sp. AL212 methane monooxygenase/ammonia monooxygenase subunit B YP_004295565.1 2564165 R 153948 CDS YP_004295566.1 325983164 10299145 complement(2565427..2566251) 1 NC_015222.1 KEGG: nmu:Nmul_A2765 ammonia monooxygenase; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit A; methane monooxygenase/ammonia monooxygenase subunit A 2566251 10299145 NAL212_2605 Nitrosomonas sp. AL212 methane monooxygenase/ammonia monooxygenase subunit A YP_004295566.1 2565427 R 153948 CDS YP_004295567.1 325983165 10299146 complement(2566426..2567235) 1 NC_015222.1 KEGG: nmu:Nmul_A2766 ammonia monooxygenase/methane monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; methane monooxygenase/ammonia monooxygenase subunit C 2567235 10299146 NAL212_2606 Nitrosomonas sp. AL212 methane monooxygenase/ammonia monooxygenase subunit C YP_004295567.1 2566426 R 153948 CDS YP_004295568.1 325983166 10299149 2569029..2570183 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region; integrase catalytic region 2570183 10299149 NAL212_2609 Nitrosomonas sp. AL212 integrase catalytic region YP_004295568.1 2569029 D 153948 CDS YP_004295569.1 325983167 10299153 complement(2571285..2571671) 1 NC_015222.1 KEGG: net:Neut_1130 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; response regulator receiver protein 2571671 10299153 NAL212_2613 Nitrosomonas sp. AL212 response regulator receiver protein YP_004295569.1 2571285 R 153948 CDS YP_004295570.1 325983168 10299154 complement(2571802..2573259) 1 NC_015222.1 PFAM: Cation transporter; KEGG: neu:NE1835 cation transport protein; cation transporter 2573259 10299154 NAL212_2614 Nitrosomonas sp. AL212 cation transporter YP_004295570.1 2571802 R 153948 CDS YP_004295571.1 325983169 10299155 complement(2573272..2574720) 1 NC_015222.1 PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: neu:NE1834 potassium transporter peripheral membrane component; TrkA-N domain-containing protein 2574720 10299155 NAL212_2615 Nitrosomonas sp. AL212 TrkA-N domain-containing protein YP_004295571.1 2573272 R 153948 CDS YP_004295572.1 325983170 10299156 complement(2574730..2575518) 1 NC_015222.1 PFAM: Inositol monophosphatase; KEGG: net:Neut_1051 inositol monophosphatase; inositol monophosphatase 2575518 10299156 NAL212_2616 Nitrosomonas sp. AL212 inositol monophosphatase YP_004295572.1 2574730 R 153948 CDS YP_004295573.1 325983171 10299157 complement(2575518..2576078) 1 NC_015222.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: net:Neut_1050 redoxin domain-containing protein; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 2576078 10299157 NAL212_2617 Nitrosomonas sp. AL212 alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen YP_004295573.1 2575518 R 153948 CDS YP_004295574.1 325983172 10299158 2576247..2576993 1 NC_015222.1 KEGG: neu:NE0779 16S ribosomal RNA methyltransferase RsmE; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: Ribosomal RNA small subunit methyltransferase E; ribosomal RNA small subunit methyltransferase E 2576993 10299158 NAL212_2618 Nitrosomonas sp. AL212 ribosomal RNA small subunit methyltransferase E YP_004295574.1 2576247 D 153948 CDS YP_004295575.1 325983173 10299159 2576996..2578354 1 NC_015222.1 TIGRFAM: Amino-acid N-acetyltransferase (ArgA); KEGG: nmu:Nmul_A0380 N-acetylglutamate synthase; PFAM: Aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase (GNAT) domain; amino-acid N-acetyltransferase 2578354 10299159 NAL212_2619 Nitrosomonas sp. AL212 amino-acid N-acetyltransferase YP_004295575.1 2576996 D 153948 CDS YP_004295576.1 325983174 10299160 2578457..2578729 1 NC_015222.1 PFAM: Fe(II) trafficking protein YggX; KEGG: neu:NE0322 hypothetical protein; Fe(II) trafficking protein YggX 2578729 10299160 NAL212_2620 Nitrosomonas sp. AL212 Fe(II) trafficking protein YggX YP_004295576.1 2578457 D 153948 CDS YP_004295577.1 325983175 10299161 2578831..2580786 1 NC_015222.1 PFAM: ASPIC/UnbV; KEGG: cyc:PCC7424_4587 ASPIC/UnbV domain protein; ASPIC/UnbV domain-containing protein 2580786 10299161 NAL212_2621 Nitrosomonas sp. AL212 ASPIC/UnbV domain-containing protein YP_004295577.1 2578831 D 153948 CDS YP_004295578.1 325983176 10299162 complement(2580859..2581068) 1 NC_015222.1 KEGG: phu:Phum_PHUM371240 hypothetical protein; hypothetical protein 2581068 10299162 NAL212_2622 Nitrosomonas sp. AL212 hypothetical protein YP_004295578.1 2580859 R 153948 CDS YP_004295579.1 325983177 10299163 2581180..2583621 1 NC_015222.1 PFAM: Peptidase S16, Lon C-terminal; KEGG: rfr:Rfer_3315 putative ATP-dependent protease La, putative; peptidase S16 lon domain-containing protein 2583621 10299163 NAL212_2623 Nitrosomonas sp. AL212 peptidase S16 lon domain-containing protein YP_004295579.1 2581180 D 153948 CDS YP_004295580.1 325983178 10299164 complement(2583664..2584557) 1 NC_015222.1 KEGG: ppr:PBPRB1378 hypothetical protein; hypothetical protein 2584557 10299164 NAL212_2624 Nitrosomonas sp. AL212 hypothetical protein YP_004295580.1 2583664 R 153948 CDS YP_004295581.1 325983179 10299165 complement(2584816..2585982) 1 NC_015222.1 KEGG: nde:NIDE1370 hypothetical protein; hypothetical protein 2585982 10299165 NAL212_2625 Nitrosomonas sp. AL212 hypothetical protein YP_004295581.1 2584816 R 153948 CDS YP_004295582.1 325983180 10299166 complement(2586605..2587768) 1 NC_015222.1 KEGG: nde:NIDE1370 hypothetical protein; hypothetical protein 2587768 10299166 NAL212_2626 Nitrosomonas sp. AL212 hypothetical protein YP_004295582.1 2586605 R 153948 CDS YP_004295583.1 325983181 10299167 complement(2588276..2589001) 1 NC_015222.1 PFAM: Glycosyl transferase, family 2; KEGG: nmu:Nmul_A1366 glycosyl transferase family protein; family 2 glycosyl transferase 2589001 10299167 NAL212_2627 Nitrosomonas sp. AL212 family 2 glycosyl transferase YP_004295583.1 2588276 R 153948 CDS YP_004295584.1 325983182 10299168 complement(2589088..2589678) 1 NC_015222.1 KEGG: nhl:Nhal_2068 hypothetical protein; hypothetical protein 2589678 10299168 NAL212_2628 Nitrosomonas sp. AL212 hypothetical protein YP_004295584.1 2589088 R 153948 CDS YP_004295585.1 325983183 10299169 complement(2589860..2591335) 1 NC_015222.1 KEGG: slt:Slit_2458 carbohydrate kinase, FGGY-like protein; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; glycerol kinase 2591335 10299169 NAL212_2629 Nitrosomonas sp. AL212 glycerol kinase YP_004295585.1 2589860 R 153948 CDS YP_004295586.1 325983184 10299170 complement(2591332..2592921) 1 NC_015222.1 KEGG: slt:Slit_2459 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase 2592921 10299170 NAL212_2630 Nitrosomonas sp. AL212 glycerol-3-phosphate dehydrogenase YP_004295586.1 2591332 R 153948 CDS YP_004295587.1 325983185 10299171 complement(2592918..2593658) 1 NC_015222.1 PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: slt:Slit_2460 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 2593658 10299171 NAL212_2631 Nitrosomonas sp. AL212 glycerophosphoryl diester phosphodiesterase YP_004295587.1 2592918 R 153948 CDS YP_004295588.1 325983186 10299172 complement(2593694..2594851) 1 NC_015222.1 PFAM: Ankyrin repeat; KEGG: aas:Aasi_1435 hypothetical protein; ankyrin 2594851 10299172 NAL212_2632 Nitrosomonas sp. AL212 ankyrin YP_004295588.1 2593694 R 153948 CDS YP_004295589.1 325983187 10299173 2595095..2595841 1 NC_015222.1 KEGG: nmu:Nmul_A1977 hypothetical protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase; multi-copper polyphenol oxidoreductase, laccase 2595841 10299173 NAL212_2633 Nitrosomonas sp. AL212 multi-copper polyphenol oxidoreductase, laccase YP_004295589.1 2595095 D 153948 CDS YP_004295590.1 325983188 10299174 2595916..2596716 1 NC_015222.1 PFAM: Zinc/iron permease; KEGG: nmu:Nmul_A1978 zinc transporter ZIP; zinc/iron permease 2596716 10299174 NAL212_2634 Nitrosomonas sp. AL212 zinc/iron permease YP_004295590.1 2595916 D 153948 CDS YP_004295591.1 325983189 10299175 2596772..2597188 1 NC_015222.1 KEGG: dma:DMR_04640 hypothetical protein; hypothetical protein 2597188 10299175 NAL212_2635 Nitrosomonas sp. AL212 hypothetical protein YP_004295591.1 2596772 D 153948 CDS YP_004295592.1 325983190 10299176 2597351..2598610 1 NC_015222.1 PFAM: Major facilitator superfamily MFS-1; KEGG: tye:THEYE_A0038 oxalate/formate antiporter; major facilitator superfamily protein 2598610 10299176 NAL212_2636 Nitrosomonas sp. AL212 major facilitator superfamily protein YP_004295592.1 2597351 D 153948 CDS YP_004295593.1 325983191 10299177 2598683..2599429 1 NC_015222.1 KEGG: pif:PITG_13861 hypothetical protein; hypothetical protein 2599429 10299177 NAL212_2637 Nitrosomonas sp. AL212 hypothetical protein YP_004295593.1 2598683 D 153948 CDS YP_004295594.1 325983192 10299178 complement(2599508..2600215) 1 NC_015222.1 KEGG: lme:LEUM_0004 recombination protein F; hypothetical protein 2600215 10299178 NAL212_2638 Nitrosomonas sp. AL212 hypothetical protein YP_004295594.1 2599508 R 153948 CDS YP_004295595.1 325983193 10299179 complement(2600282..2601133) 1 NC_015222.1 KEGG: cfe:CF0099 hypothetical protein; hypothetical protein 2601133 10299179 NAL212_2639 Nitrosomonas sp. AL212 hypothetical protein YP_004295595.1 2600282 R 153948 CDS YP_004295596.1 325983194 10299180 complement(2601123..2602022) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit; integrase catalytic region 2602022 10299180 NAL212_2640 Nitrosomonas sp. AL212 integrase catalytic region YP_004295596.1 2601123 R 153948 CDS YP_004295597.1 325983195 10299181 complement(2602022..2602342) 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2602342 10299181 NAL212_2641 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004295597.1 2602022 R 153948 CDS YP_004295598.1 325983196 10299182 complement(2602365..2602568) 1 NC_015222.1 hypothetical protein 2602568 10299182 NAL212_2642 Nitrosomonas sp. AL212 hypothetical protein YP_004295598.1 2602365 R 153948 CDS YP_004295599.1 325983197 10299183 complement(2602596..2602949) 1 NC_015222.1 KEGG: ddf:DEFDS_P244 hypothetical protein; hypothetical protein 2602949 10299183 NAL212_2643 Nitrosomonas sp. AL212 hypothetical protein YP_004295599.1 2602596 R 153948 CDS YP_004295600.1 325983198 10299184 2603069..2604031 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: cyn:Cyan7425_5319 transposase IS4 family protein; transposase IS4 family protein 2604031 10299184 NAL212_2644 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004295600.1 2603069 D 153948 CDS YP_004295601.1 325983199 10299186 2604574..2604894 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2604894 10299186 NAL212_2646 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004295601.1 2604574 D 153948 CDS YP_004295602.1 325983200 10299187 2604894..2605793 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit; integrase catalytic region 2605793 10299187 NAL212_2647 Nitrosomonas sp. AL212 integrase catalytic region YP_004295602.1 2604894 D 153948 CDS YP_004295603.1 325983201 10299188 complement(2605977..2607476) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: mms:mma_2809 transposase IstA; integrase catalytic region 2607476 10299188 NAL212_2648 Nitrosomonas sp. AL212 integrase catalytic region YP_004295603.1 2605977 R 153948 CDS YP_004295604.1 325983202 10299189 2607717..2608355 1 NC_015222.1 PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: bba:Bd3594 hypothetical protein; glutathione S-transferase domain-containing protein 2608355 10299189 NAL212_2649 Nitrosomonas sp. AL212 glutathione S-transferase domain-containing protein YP_004295604.1 2607717 D 153948 CDS YP_004295605.1 325983203 10299190 complement(2608352..2609203) 1 NC_015222.1 PFAM: RIO-like kinase; KEGG: mpt:Mpe_A1034 RIO-type serine/threonine protein kinase; RIO-like kinase 2609203 10299190 NAL212_2650 Nitrosomonas sp. AL212 RIO-like kinase YP_004295605.1 2608352 R 153948 CDS YP_004295606.1 325983204 10299191 complement(2609462..2609947) 1 NC_015222.1 KEGG: gur:Gura_0848 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 2609947 10299191 NAL212_2651 Nitrosomonas sp. AL212 3-demethylubiquinone-9 3-methyltransferase YP_004295606.1 2609462 R 153948 CDS YP_004295607.1 325983205 10299192 complement(2610106..2610237) 1 NC_015222.1 hypothetical protein 2610237 10299192 NAL212_2652 Nitrosomonas sp. AL212 hypothetical protein YP_004295607.1 2610106 R 153948 CDS YP_004295608.1 325983206 10299193 complement(2610277..2610666) 1 NC_015222.1 KEGG: lxx:Lxx04630 ABC transporter, permease protein; hypothetical protein 2610666 10299193 NAL212_2653 Nitrosomonas sp. AL212 hypothetical protein YP_004295608.1 2610277 R 153948 CDS YP_004295609.1 325983207 10299194 complement(2610689..2610895) 1 NC_015222.1 PFAM: CopG-like DNA-binding; KEGG: rha:RHA1_ro08415 hypothetical protein; CopG-like DNA-binding domain-containing protein 2610895 10299194 NAL212_2654 Nitrosomonas sp. AL212 CopG-like DNA-binding domain-containing protein YP_004295609.1 2610689 R 153948 CDS YP_004295610.1 325983208 10299195 2611303..2612907 1 NC_015222.1 KEGG: nmu:Nmul_A1811 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 2612907 10299195 NAL212_2655 Nitrosomonas sp. AL212 ABC transporter YP_004295610.1 2611303 D 153948 CDS YP_004295611.1 325983209 10299197 2614537..2614836 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: rms:RMA_0745 transposase; transposase IS3/IS911 family protein 2614836 10299197 NAL212_2657 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004295611.1 2614537 D 153948 CDS YP_004295612.1 325983210 10299198 2614868..2616022 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region; integrase catalytic region 2616022 10299198 NAL212_2658 Nitrosomonas sp. AL212 integrase catalytic region YP_004295612.1 2614868 D 153948 CDS YP_004295613.1 325983211 10299200 complement(2616441..2617223) 1 NC_015222.1 KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 2617223 10299200 NAL212_2660 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004295613.1 2616441 R 153948 CDS YP_004295614.1 325983212 10299201 complement(2617327..2618241) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: pst:PSPTO_B0040 ISPsy4, transposase; integrase catalytic region 2618241 10299201 NAL212_2661 Nitrosomonas sp. AL212 integrase catalytic region YP_004295614.1 2617327 R 153948 CDS YP_004295615.1 325983213 10299202 complement(2619379..2620188) 1 NC_015222.1 TIGRFAM: GTP cyclohydrolase FolE2/MptA; KEGG: neu:NE1163 putative GTP cyclohydrolase; PFAM: GTP cyclohydrolase FolE2/MptA; hypothetical protein 2620188 10299202 NAL212_2662 Nitrosomonas sp. AL212 hypothetical protein YP_004295615.1 2619379 R 153948 CDS YP_004295616.1 325983214 10299203 complement(2620255..2622099) 1 NC_015222.1 SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Deoxyxylulose-5-phosphate synthase; KEGG: net:Neut_1501 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; Dehydrogenase, E1 component; deoxyxylulose-5-phosphate synthase 2622099 10299203 NAL212_2663 Nitrosomonas sp. AL212 deoxyxylulose-5-phosphate synthase YP_004295616.1 2620255 R 153948 CDS YP_004295617.1 325983215 10299204 complement(2622141..2623034) 1 NC_015222.1 KEGG: nmu:Nmul_A0235 polyprenyl synthetase; PFAM: Polyprenyl synthetase; Geranyltranstransferase 2623034 10299204 NAL212_2664 Nitrosomonas sp. AL212 Geranyltranstransferase YP_004295617.1 2622141 R 153948 CDS YP_004295618.1 325983216 10299205 complement(2623024..2623278) 1 NC_015222.1 KEGG: net:Neut_1499 exodeoxyribonuclease VII small subunit; TIGRFAM: Exonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; exodeoxyribonuclease VII small subunit 2623278 10299205 NAL212_2665 Nitrosomonas sp. AL212 exodeoxyribonuclease VII small subunit YP_004295618.1 2623024 R 153948 CDS YP_004295619.1 325983217 10299206 2623710..2624183 1 NC_015222.1 KEGG: neu:NE0798 hypothetical protein; hypothetical protein 2624183 10299206 NAL212_2666 Nitrosomonas sp. AL212 hypothetical protein YP_004295619.1 2623710 D 153948 CDS YP_004295620.1 325983218 10299207 2624274..2625425 1 NC_015222.1 KEGG: nmu:Nmul_A0400 hypothetical protein; hypothetical protein 2625425 10299207 NAL212_2667 Nitrosomonas sp. AL212 hypothetical protein YP_004295620.1 2624274 D 153948 CDS YP_004295621.1 325983219 10299208 2625422..2626234 1 NC_015222.1 KEGG: nmu:Nmul_A0401 hypothetical protein; hypothetical protein 2626234 10299208 NAL212_2668 Nitrosomonas sp. AL212 hypothetical protein YP_004295621.1 2625422 D 153948 CDS YP_004295622.1 325983220 10299209 2626231..2627307 1 NC_015222.1 PFAM: Permease YjgP/YjgQ, predicted; KEGG: neu:NE0801 hypothetical protein; YjgP/YjgQ family permease 2627307 10299209 NAL212_2669 Nitrosomonas sp. AL212 YjgP/YjgQ family permease YP_004295622.1 2626231 D 153948 CDS YP_004295623.1 325983221 10299210 2627307..2628365 1 NC_015222.1 PFAM: Permease YjgP/YjgQ, predicted; KEGG: net:Neut_1103 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 2628365 10299210 NAL212_2670 Nitrosomonas sp. AL212 YjgP/YjgQ family permease YP_004295623.1 2627307 D 153948 CDS YP_004295624.1 325983222 10299211 2628619..2629851 1 NC_015222.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: net:Neut_1104 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 2629851 10299211 NAL212_2671 Nitrosomonas sp. AL212 CDP-alcohol phosphatidyltransferase YP_004295624.1 2628619 D 153948 CDS YP_004295625.1 325983223 10299212 2629880..2631874 1 NC_015222.1 PFAM: Diacylglycerol kinase, catalytic domain; KEGG: nmu:Nmul_A0406 hypothetical protein; diacylglycerol kinase catalytic subunit 2631874 10299212 NAL212_2672 Nitrosomonas sp. AL212 diacylglycerol kinase catalytic subunit YP_004295625.1 2629880 D 153948 CDS YP_004295626.1 325983224 10299213 2631962..2632606 1 NC_015222.1 PFAM: Protein of unknown function DUF2959; KEGG: net:Neut_1107 hypothetical protein; hypothetical protein 2632606 10299213 NAL212_2673 Nitrosomonas sp. AL212 hypothetical protein YP_004295626.1 2631962 D 153948 CDS YP_004295627.1 325983225 10299214 2632677..2633213 1 NC_015222.1 PFAM: YaeQ; KEGG: pca:Pcar_2272 hypothetical protein; YaeQ family protein 2633213 10299214 NAL212_2674 Nitrosomonas sp. AL212 YaeQ family protein YP_004295627.1 2632677 D 153948 CDS YP_004295628.1 325983226 10299215 complement(2633318..2633668) 1 NC_015222.1 PFAM: Protein of unknown function DUF488; KEGG: rle:pRL120460 hypothetical protein; hypothetical protein 2633668 10299215 NAL212_2675 Nitrosomonas sp. AL212 hypothetical protein YP_004295628.1 2633318 R 153948 CDS YP_004295629.1 325983227 10299216 complement(2633750..2634133) 1 NC_015222.1 KEGG: rcu:RCOM_1956380 hypothetical protein; hypothetical protein 2634133 10299216 NAL212_2676 Nitrosomonas sp. AL212 hypothetical protein YP_004295629.1 2633750 R 153948 CDS YP_004295630.1 325983228 10299217 2634516..2635166 1 NC_015222.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: nmu:Nmul_A2300 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 2635166 10299217 NAL212_2677 Nitrosomonas sp. AL212 MotA/TolQ/ExbB proton channel YP_004295630.1 2634516 D 153948 CDS YP_004295631.1 325983229 10299218 2635153..2635554 1 NC_015222.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: nmu:Nmul_A2301 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 2635554 10299218 NAL212_2678 Nitrosomonas sp. AL212 biopolymer transport protein ExbD/TolR YP_004295631.1 2635153 D 153948 CDS YP_004295632.1 325983230 10299219 2635565..2636440 1 NC_015222.1 KEGG: nmu:Nmul_A2302 hypothetical protein; hypothetical protein 2636440 10299219 NAL212_2679 Nitrosomonas sp. AL212 hypothetical protein YP_004295632.1 2635565 D 153948 CDS YP_004295633.1 325983231 10299220 2636584..2637930 1 NC_015222.1 PFAM: Protein of unknown function DUF3391; Metal-dependent phosphohydrolase, HD subdomain; KEGG: nwa:Nwat_2753 metal dependent phosphohydrolase; metal dependent phosphohydrolase 2637930 10299220 NAL212_2680 Nitrosomonas sp. AL212 metal dependent phosphohydrolase YP_004295633.1 2636584 D 153948 CDS YP_004295634.1 325983232 10299221 2637943..2639241 1 NC_015222.1 KEGG: nwa:Nwat_2754 diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, EAL domain; diguanylate cyclase/phosphodiesterase 2639241 10299221 NAL212_2681 Nitrosomonas sp. AL212 diguanylate cyclase/phosphodiesterase YP_004295634.1 2637943 D 153948 CDS YP_004295635.1 325983233 10299223 complement(2640084..2640545) 1 NC_015222.1 KEGG: meh:M301_0765 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif putative anchor domain-containing protein 2640545 10299223 NAL212_2683 Nitrosomonas sp. AL212 PEP motif putative anchor domain-containing protein YP_004295635.1 2640084 R 153948 CDS YP_004295636.1 325983234 10299224 2640799..2641953 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region; integrase catalytic region 2641953 10299224 NAL212_2684 Nitrosomonas sp. AL212 integrase catalytic region YP_004295636.1 2640799 D 153948 CDS YP_004295637.1 325983235 10299225 complement(2642015..2642149) 1 NC_015222.1 hypothetical protein 2642149 10299225 NAL212_2685 Nitrosomonas sp. AL212 hypothetical protein YP_004295637.1 2642015 R 153948 CDS YP_004295638.1 325983236 10299226 complement(2642121..2642639) 1 NC_015222.1 manually curated; KEGG: mca:MCA0595 hypothetical protein; hypothetical protein 2642639 10299226 NAL212_2686 Nitrosomonas sp. AL212 hypothetical protein YP_004295638.1 2642121 R 153948 CDS YP_004295639.1 325983237 10299227 complement(2642636..2643235) 1 NC_015222.1 PFAM: Glycoside hydrolase, family 19, catalytic; KEGG: dda:Dd703_0358 glycoside hydrolase family 19; glycoside hydrolase family protein 2643235 10299227 NAL212_2687 Nitrosomonas sp. AL212 glycoside hydrolase family protein YP_004295639.1 2642636 R 153948 CDS YP_004295640.1 325983238 10299228 2643334..2645127 1 NC_015222.1 TIGRFAM: DNA mismatch repair protein, N-terminal; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATPase-like, ATP-binding domain; KEGG: nmu:Nmul_A1144 DNA mismatch repair protein MutL; SMART: MutL, C-terminal, dimerisation; ATPase-like, ATP-binding domain; DNA mismatch repair protein MutL 2645127 10299228 NAL212_2688 Nitrosomonas sp. AL212 DNA mismatch repair protein MutL YP_004295640.1 2643334 D 153948 CDS YP_004295641.1 325983239 10299229 complement(2645295..2646293) 1 NC_015222.1 KEGG: rba:RB8859 D-lactate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-lactate dehydrogenase 2646293 10299229 NAL212_2689 Nitrosomonas sp. AL212 D-lactate dehydrogenase YP_004295641.1 2645295 R 153948 CDS YP_004295642.1 325983240 10299230 2646625..2648973 1 NC_015222.1 TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; ATPase, P-type, heavy metal translocating; KEGG: maq:Maqu_0131 copper-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; YHS; Haloacid dehalogenase-like hydrolase; copper-translocating P-type ATPase 2648973 10299230 NAL212_2690 Nitrosomonas sp. AL212 copper-translocating P-type ATPase YP_004295642.1 2646625 D 153948 CDS YP_004295643.1 325983241 10299231 2649090..2649695 1 NC_015222.1 KEGG: noc:Noc_2414 flavoprotein WrbA; TIGRFAM: Flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavoprotein WrbA 2649695 10299231 NAL212_2691 Nitrosomonas sp. AL212 flavoprotein WrbA YP_004295643.1 2649090 D 153948 CDS YP_004295644.1 325983242 10299232 2649745..2650566 1 NC_015222.1 PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: neu:NE0738 hypothetical protein; extradiol ring-cleavage dioxygenase class III protein subunit B 2650566 10299232 NAL212_2692 Nitrosomonas sp. AL212 extradiol ring-cleavage dioxygenase class III protein subunit B YP_004295644.1 2649745 D 153948 CDS YP_004295645.1 325983243 10299233 2650683..2651000 1 NC_015222.1 KEGG: neu:NE0739 cytochrome c, class I; cytochrome c, class I 2651000 10299233 NAL212_2693 Nitrosomonas sp. AL212 cytochrome c, class I YP_004295645.1 2650683 D 153948 CDS YP_004295646.1 325983244 10299234 2651027..2651977 1 NC_015222.1 KEGG: neu:NE0740 hypothetical protein; hypothetical protein 2651977 10299234 NAL212_2694 Nitrosomonas sp. AL212 hypothetical protein YP_004295646.1 2651027 D 153948 CDS YP_004295647.1 325983245 10299235 2651990..2653534 1 NC_015222.1 KEGG: neu:NE0741 FAD linked oxidase, N-terminal:FAD linked oxidase, C-terminal; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; 4-cresol dehydrogenase 2653534 10299235 NAL212_2695 Nitrosomonas sp. AL212 4-cresol dehydrogenase YP_004295647.1 2651990 D 153948 CDS YP_004295648.1 325983246 10299236 2653585..2654694 1 NC_015222.1 KEGG: neu:NE0742 zinc-containing alcohol dehydrogenase superfamily protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; aryl-alcohol dehydrogenase 2654694 10299236 NAL212_2696 Nitrosomonas sp. AL212 aryl-alcohol dehydrogenase YP_004295648.1 2653585 D 153948 CDS YP_004295649.1 325983247 10299237 2654755..2656257 1 NC_015222.1 KEGG: ote:Oter_1695 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; betaine-aldehyde dehydrogenase 2656257 10299237 NAL212_2697 Nitrosomonas sp. AL212 betaine-aldehyde dehydrogenase YP_004295649.1 2654755 D 153948 CDS YP_004295650.1 325983248 10299238 2656577..2658385 1 NC_015222.1 KEGG: mlo:mll1810 hypothetical protein; manually curated; PFAM: Uncharacterised protein family UPF0118; hypothetical protein 2658385 10299238 NAL212_2698 Nitrosomonas sp. AL212 hypothetical protein YP_004295650.1 2656577 D 153948 CDS YP_004295651.1 325983249 10299239 2658647..2659036 1 NC_015222.1 KEGG: gca:Galf_0047 hypothetical protein; hypothetical protein 2659036 10299239 NAL212_2699 Nitrosomonas sp. AL212 hypothetical protein YP_004295651.1 2658647 D 153948 CDS YP_004295652.1 325983250 10299240 complement(2659255..2660712) 1 NC_015222.1 KEGG: gpb:HDN1F_12050 catalase; PFAM: Catalase-related subgroup; Catalase-related immune responsive; catalase 2660712 10299240 NAL212_2700 Nitrosomonas sp. AL212 catalase YP_004295652.1 2659255 R 153948 CDS YP_004295653.1 325983251 10299241 2661082..2661285 1 NC_015222.1 KEGG: rpf:Rpic12D_4386 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 2661285 10299241 NAL212_2701 Nitrosomonas sp. AL212 cold-shock DNA-binding domain-containing protein YP_004295653.1 2661082 D 153948 CDS YP_004295654.1 325983252 10299242 2661442..2661657 1 NC_015222.1 KEGG: pbe:PB000289.02.0 hypothetical protein; hypothetical protein 2661657 10299242 NAL212_2702 Nitrosomonas sp. AL212 hypothetical protein YP_004295654.1 2661442 D 153948 CDS YP_004295655.1 325983253 10299243 2661694..2662917 1 NC_015222.1 TIGRFAM: Arginine biosynthesis protein ArgJ; KEGG: gca:Galf_0347 arginine biosynthesis bifunctional protein ArgJ; PFAM: Arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ 2662917 10299243 NAL212_2703 Nitrosomonas sp. AL212 arginine biosynthesis bifunctional protein ArgJ YP_004295655.1 2661694 D 153948 CDS YP_004295656.1 325983254 10299244 2662938..2663816 1 NC_015222.1 KEGG: nmu:Nmul_A1008 hypothetical protein; PFAM: Domain of unknown function DUF815; SMART: ATPase, AAA+ type, core; hypothetical protein 2663816 10299244 NAL212_2704 Nitrosomonas sp. AL212 hypothetical protein YP_004295656.1 2662938 D 153948 CDS YP_004295657.1 325983255 10299245 2663813..2664781 1 NC_015222.1 PFAM: Thiamine monophosphate synthase; NUDIX hydrolase domain; KEGG: neu:NE2215 hypothetical protein; thiamine monophosphate synthase 2664781 10299245 NAL212_2705 Nitrosomonas sp. AL212 thiamine monophosphate synthase YP_004295657.1 2663813 D 153948 CDS YP_004295658.1 325983256 10299246 complement(2664792..2665913) 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: hse:Hsero_4138 GGDEF domain-containing protein; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 2665913 10299246 NAL212_2706 Nitrosomonas sp. AL212 diguanylate cyclase YP_004295658.1 2664792 R 153948 CDS YP_004295659.1 325983257 10299247 complement(2665925..2666101) 1 NC_015222.1 PFAM: Uncharacterised protein family, zinc-binding; KEGG: nmu:Nmul_A1006 hypothetical protein; hypothetical protein 2666101 10299247 NAL212_2707 Nitrosomonas sp. AL212 hypothetical protein YP_004295659.1 2665925 R 153948 CDS YP_004295660.1 325983258 10299248 2666314..2666889 1 NC_015222.1 KEGG: nmu:Nmul_A1051 RNA polymerase factor sigma-70; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 2666889 10299248 NAL212_2708 Nitrosomonas sp. AL212 ECF subfamily RNA polymerase sigma-24 subunit YP_004295660.1 2666314 D 153948 CDS YP_004295661.1 325983259 10299249 2666886..2667257 1 NC_015222.1 KEGG: nmu:Nmul_A1052 hypothetical protein; hypothetical protein 2667257 10299249 NAL212_2709 Nitrosomonas sp. AL212 hypothetical protein YP_004295661.1 2666886 D 153948 CDS YP_004295662.1 325983260 10299250 2667239..2667598 1 NC_015222.1 PFAM: Protein of unknown function DUF3106; KEGG: nmu:Nmul_A1053 hypothetical protein; hypothetical protein 2667598 10299250 NAL212_2710 Nitrosomonas sp. AL212 hypothetical protein YP_004295662.1 2667239 D 153948 CDS YP_004295663.1 325983261 10299251 2667802..2670090 1 NC_015222.1 PFAM: ABC transporter, transmembrane domain; ABC transporter-like; KEGG: nmu:Nmul_A2254 ABC transporter related; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 2670090 10299251 NAL212_2711 Nitrosomonas sp. AL212 xenobiotic-transporting ATPase YP_004295663.1 2667802 D 153948 CDS YP_004295664.1 325983262 10299252 2670091..2670564 1 NC_015222.1 PFAM: Domain of unknown function DUF1854; KEGG: app:CAP2UW1_3889 hypothetical protein; hypothetical protein 2670564 10299252 NAL212_2712 Nitrosomonas sp. AL212 hypothetical protein YP_004295664.1 2670091 D 153948 CDS YP_004295665.1 325983263 10299253 complement(2670469..2671839) 1 NC_015222.1 PFAM: Uncharacterised protein family UPF0027; KEGG: rsl:RPSI07_3186 hypothetical protein; hypothetical protein 2671839 10299253 NAL212_2713 Nitrosomonas sp. AL212 hypothetical protein YP_004295665.1 2670469 R 153948 CDS YP_004295666.1 325983264 10299255 complement(2672357..2673664) 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase; transposase IS4 family protein 2673664 10299255 NAL212_2715 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004295666.1 2672357 R 153948 CDS YP_004295667.1 325983265 10299256 complement(2675880..2677274) 1 NC_015222.1 KEGG: net:Neut_2155 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related; tRNA modification GTPase TrmE 2677274 10299256 NAL212_2716 Nitrosomonas sp. AL212 tRNA modification GTPase TrmE YP_004295667.1 2675880 R 153948 CDS YP_004295668.1 325983266 10299257 complement(2677452..2679380) 1 NC_015222.1 KEGG: neu:NE0387 60Kd inner membrane protein; TIGRFAM: Membrane insertion protein, OxaA/YidC, bacterial; Membrane insertion protein, OxaA/YidC; PFAM: Membrane insertion protein, OxaA/YidC; YidC/Oxa1 family membrane protein insertase 2679380 10299257 NAL212_2717 Nitrosomonas sp. AL212 YidC/Oxa1 family membrane protein insertase YP_004295668.1 2677452 R 153948 CDS YP_004295669.1 325983267 10299258 complement(2679591..2679977) 1 NC_015222.1 PFAM: Ribonuclease P; manually curated; TIGRFAM: Ribonuclease P; KEGG: net:Neut_2152 ribonuclease P protein component; HAMAP: Ribonuclease P; ribonuclease P protein component 2679977 10299258 NAL212_2718 Nitrosomonas sp. AL212 ribonuclease P protein component YP_004295669.1 2679591 R 153948 CDS YP_004295670.1 325983268 10299259 complement(2679991..2680125) 1 NC_015222.1 KEGG: tmz:Tmz1t_2334 50S ribosomal protein L34; TIGRFAM: Ribosomal protein L34; PFAM: Ribosomal protein L34; 50S ribosomal protein L34 2680125 10299259 NAL212_2719 Nitrosomonas sp. AL212 50S ribosomal protein L34 YP_004295670.1 2679991 R 153948 CDS YP_004295671.1 325983269 10299260 2680611..2681963 1 NC_015222.1 KEGG: net:Neut_1510 exodeoxyribonuclease VII large subunit; TIGRFAM: Exonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; exodeoxyribonuclease VII large subunit 2681963 10299260 NAL212_2720 Nitrosomonas sp. AL212 exodeoxyribonuclease VII large subunit YP_004295671.1 2680611 D 153948 CDS YP_004295672.1 325983270 10299261 2682008..2682382 1 NC_015222.1 PFAM: Protein of unknown function DUF423; KEGG: nmu:Nmul_A1031 hypothetical protein; hypothetical protein 2682382 10299261 NAL212_2721 Nitrosomonas sp. AL212 hypothetical protein YP_004295672.1 2682008 D 153948 CDS YP_004295673.1 325983271 10299262 complement(2682541..2682885) 1 NC_015222.1 KEGG: nmu:Nmul_A0729 hypothetical protein; hypothetical protein 2682885 10299262 NAL212_2722 Nitrosomonas sp. AL212 hypothetical protein YP_004295673.1 2682541 R 153948 CDS YP_004295674.1 325983272 10299263 2683056..2683574 1 NC_015222.1 PFAM: Disulphide bond formation protein DsbB/BdbC; KEGG: net:Neut_1513 disulphide bond formation protein DsbB; disulfide bond formation protein DsbB 2683574 10299263 NAL212_2723 Nitrosomonas sp. AL212 disulfide bond formation protein DsbB YP_004295674.1 2683056 D 153948 CDS YP_004295675.1 325983273 10299264 complement(2683587..2684498) 1 NC_015222.1 KEGG: nmu:Nmul_A0748 tyrosine recombinase XerD; TIGRFAM: Tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; tyrosine recombinase XerD 2684498 10299264 NAL212_2724 Nitrosomonas sp. AL212 tyrosine recombinase XerD YP_004295675.1 2683587 R 153948 CDS YP_004295676.1 325983274 10299265 complement(2684485..2684988) 1 NC_015222.1 KEGG: nmu:Nmul_A0747 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; methylated-DNA--protein-cysteine methyltransferase 2684988 10299265 NAL212_2725 Nitrosomonas sp. AL212 methylated-DNA--protein-cysteine methyltransferase YP_004295676.1 2684485 R 153948 CDS YP_004295677.1 325983275 10299267 2687083..2688699 1 NC_015222.1 KEGG: amr:AM1_6172 IS5 family transposase; IS5 family transposase 2688699 10299267 NAL212_2727 Nitrosomonas sp. AL212 IS5 family transposase YP_004295677.1 2687083 D 153948 CDS YP_004295678.1 325983276 10299268 complement(2689055..2690497) 1 NC_015222.1 TIGRFAM: NAD(P)H-quinone oxidoreductase, subunit N/subunit 2; KEGG: neu:NE1764 NADH dehydrogenase subunit N; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase, chain N 2690497 10299268 NAL212_2728 Nitrosomonas sp. AL212 proton-translocating NADH-quinone oxidoreductase, chain N YP_004295678.1 2689055 R 153948 CDS YP_004295679.1 325983277 10299269 complement(2690548..2692032) 1 NC_015222.1 TIGRFAM: NADH-quinone oxidoreductase, chain M/4; KEGG: nmu:Nmul_A1103 NADH dehydrogenase subunit M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 4, N-terminal; proton-translocating NADH-quinone oxidoreductase subunit M 2692032 10299269 NAL212_2729 Nitrosomonas sp. AL212 proton-translocating NADH-quinone oxidoreductase subunit M YP_004295679.1 2690548 R 153948 CDS YP_004295680.1 325983278 10299270 complement(2692134..2694074) 1 NC_015222.1 TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; KEGG: nmu:Nmul_A1102 proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; NADH dehydrogenase subunit 5, C-terminal; proton-translocating NADH-quinone oxidoreductase subunit L 2694074 10299270 NAL212_2730 Nitrosomonas sp. AL212 proton-translocating NADH-quinone oxidoreductase subunit L YP_004295680.1 2692134 R 153948 CDS YP_004295681.1 325983279 10299271 complement(2694122..2694427) 1 NC_015222.1 KEGG: net:Neut_0932 NADH dehydrogenase subunit K; HAMAP: NADH-ubiquinone oxidoreductase chain 4L/K; PFAM: NADH-ubiquinone oxidoreductase chain 4L/K; NAD(P)H-quinone oxidoreductase subunit 4L 2694427 10299271 NAL212_2731 Nitrosomonas sp. AL212 NAD(P)H-quinone oxidoreductase subunit 4L YP_004295681.1 2694122 R 153948 CDS YP_004295682.1 325983280 10299272 complement(2694487..2695092) 1 NC_015222.1 PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: nmu:Nmul_A1100 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 2695092 10299272 NAL212_2732 Nitrosomonas sp. AL212 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_004295682.1 2694487 R 153948 CDS YP_004295683.1 325983281 10299273 complement(2695112..2695600) 1 NC_015222.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; KEGG: net:Neut_0930 NADH dehydrogenase subunit I; PFAM: 4Fe-4S binding domain; NADH-quinone oxidoreductase subunit I 2695600 10299273 NAL212_2733 Nitrosomonas sp. AL212 NADH-quinone oxidoreductase subunit I YP_004295683.1 2695112 R 153948 CDS YP_004295684.1 325983282 10299274 complement(2695616..2696713) 1 NC_015222.1 KEGG: neu:NE1770 respiratory-chain NADH dehydrogenase subunit 1; PFAM: NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H; NADH dehydrogenase (quinone) 2696713 10299274 NAL212_2734 Nitrosomonas sp. AL212 NADH dehydrogenase (quinone) YP_004295684.1 2695616 R 153948 CDS YP_004295685.1 325983283 10299275 complement(2696736..2699156) 1 NC_015222.1 SMART: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Molybdopterin oxidoreductase, Fe4S4 domain; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit G; KEGG: nmu:Nmul_A1097 NADH dehydrogenase subunit G; PFAM: Molybdopterin oxidoreductase; Ferredoxin; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; NADH-quinone oxidoreductase subunit G 2699156 10299275 NAL212_2735 Nitrosomonas sp. AL212 NADH-quinone oxidoreductase subunit G YP_004295685.1 2696736 R 153948 CDS YP_004295686.1 325983284 10299276 complement(2699226..2700503) 1 NC_015222.1 SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; TIGRFAM: NADH ubiquinone oxidoreductase, F subunit; KEGG: neu:NE1772 respiratory-chain NADH dehydrogenase 51 Kd subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain; NADH-quinone oxidoreductase subunit F 2700503 10299276 NAL212_2736 Nitrosomonas sp. AL212 NADH-quinone oxidoreductase subunit F YP_004295686.1 2699226 R 153948 CDS YP_004295687.1 325983285 10299277 complement(2700500..2700976) 1 NC_015222.1 TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: neu:NE1773 NADH dehydrogenase subunit E; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; NADH-quinone oxidoreductase subunit E 2700976 10299277 NAL212_2737 Nitrosomonas sp. AL212 NADH-quinone oxidoreductase subunit E YP_004295687.1 2700500 R 153948 CDS YP_004295688.1 325983286 10299278 complement(2700979..2702232) 1 NC_015222.1 TIGRFAM: NADH dehydrogenase I, subunit D; KEGG: nmu:Nmul_A1094 NADH dehydrogenase subunit D; PFAM: NADH-quinone oxidoreductase, subunit D; NADH dehydrogenase I subunit D 2702232 10299278 NAL212_2738 Nitrosomonas sp. AL212 NADH dehydrogenase I subunit D YP_004295688.1 2700979 R 153948 CDS YP_004295689.1 325983287 10299279 complement(2702282..2702905) 1 NC_015222.1 KEGG: neu:NE1775 NADH dehydrogenase subunit C; TIGRFAM: NADH dehydrogenase, subunit C; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit; NADH (or F420H2) dehydrogenase subunit C 2702905 10299279 NAL212_2739 Nitrosomonas sp. AL212 NADH (or F420H2) dehydrogenase subunit C YP_004295689.1 2702282 R 153948 CDS YP_004295690.1 325983288 10299280 complement(2702918..2703394) 1 NC_015222.1 TIGRFAM: NADH-ubiquinone oxidoreductase, 20 Kd subunit; KEGG: neu:NE1776 NADH dehydrogenase subunit B; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; NADH-quinone oxidoreductase subunit B 2703394 10299280 NAL212_2740 Nitrosomonas sp. AL212 NADH-quinone oxidoreductase subunit B YP_004295690.1 2702918 R 153948 CDS YP_004295691.1 325983289 10299281 complement(2703399..2703755) 1 NC_015222.1 manually curated; HAMAP: NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid; KEGG: nmu:Nmul_A1091 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3; NAD(P)H-quinone oxidoreductase subunit 3 2703755 10299281 NAL212_2741 Nitrosomonas sp. AL212 NAD(P)H-quinone oxidoreductase subunit 3 YP_004295691.1 2703399 R 153948 CDS YP_004295692.1 325983290 10299283 complement(2703945..2704241) 1 NC_015222.1 PFAM: Preprotein translocase SecG subunit; KEGG: neu:NE1778 preprotein translocase subunit SecG; preprotein translocase subunit SecG 2704241 10299283 NAL212_2742 Nitrosomonas sp. AL212 preprotein translocase subunit SecG YP_004295692.1 2703945 R 153948 CDS YP_004295693.1 325983291 10299284 complement(2704347..2705102) 1 NC_015222.1 TIGRFAM: Triosephosphate isomerase; KEGG: nmu:Nmul_A1089 triosephosphate isomerase; PFAM: Triosephosphate isomerase; triosephosphate isomerase 2705102 10299284 NAL212_2743 Nitrosomonas sp. AL212 triosephosphate isomerase YP_004295693.1 2704347 R 153948 CDS YP_004295694.1 325983292 10299285 complement(2705346..2706140) 1 NC_015222.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphate transport system permease protein 1; KEGG: nmu:Nmul_A1088 phosphate ABC transporter ATP-binding protein; PFAM: ABC transporter-like; phosphate ABC transporter ATPase 2706140 10299285 NAL212_2744 Nitrosomonas sp. AL212 phosphate ABC transporter ATPase YP_004295694.1 2705346 R 153948 CDS YP_004295695.1 325983293 10299286 complement(2706142..2707068) 1 NC_015222.1 KEGG: nmu:Nmul_A1087 phosphate ABC transporter permease; TIGRFAM: Phosphate transport system permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 2707068 10299286 NAL212_2745 Nitrosomonas sp. AL212 phosphate ABC transporter permease YP_004295695.1 2706142 R 153948 CDS YP_004295696.1 325983294 10299287 complement(2707148..2708080) 1 NC_015222.1 KEGG: nmu:Nmul_A1086 phosphate ABC transporter permease; TIGRFAM: Phosphate ABC transporter, permease protein PstC; PFAM: Binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 2708080 10299287 NAL212_2746 Nitrosomonas sp. AL212 phosphate ABC transporter permease YP_004295696.1 2707148 R 153948 CDS YP_004295697.1 325983295 10299288 complement(2708379..2709068) 1 NC_015222.1 PFAM: NapC/NirT cytochrome c, N-terminal; KEGG: neu:NE2336 putative tetraheme C-cytochrome; NapC/NirT cytochrome c domain-containing protein 2709068 10299288 NAL212_2747 Nitrosomonas sp. AL212 NapC/NirT cytochrome c domain-containing protein YP_004295697.1 2708379 R 153948 CDS YP_004295698.1 325983296 10299289 complement(2709068..2709790) 1 NC_015222.1 KEGG: neu:NE2337 cytochrome c-554 precursor; cytochrome c-554 2709790 10299289 NAL212_2748 Nitrosomonas sp. AL212 cytochrome c-554 YP_004295698.1 2709068 R 153948 CDS YP_004295699.1 325983297 10299290 complement(2709916..2710863) 1 NC_015222.1 KEGG: nmu:Nmul_A2661 hypothetical protein; hypothetical protein 2710863 10299290 NAL212_2749 Nitrosomonas sp. AL212 hypothetical protein YP_004295699.1 2709916 R 153948 CDS YP_004295700.1 325983298 10299291 complement(2710944..2712656) 1 NC_015222.1 KEGG: neu:NE2339 hydroxylamine oxidoreductase; hydroxylamine oxidase 2712656 10299291 NAL212_2750 Nitrosomonas sp. AL212 hydroxylamine oxidase YP_004295700.1 2710944 R 153948 CDS YP_004295701.1 325983299 10299292 complement(2712874..2713596) 1 NC_015222.1 KEGG: neu:NE0183 hypothetical protein; hypothetical protein 2713596 10299292 NAL212_2751 Nitrosomonas sp. AL212 hypothetical protein YP_004295701.1 2712874 R 153948 CDS YP_004295702.1 325983300 10299293 2713998..2714747 1 NC_015222.1 SMART: Histidine phosphatase superfamily, clade-1; TIGRFAM: Phosphoglycerate mutase 1; KEGG: neu:NE1780 phosphoglyceromutase; PFAM: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase family protein 2714747 10299293 NAL212_2752 Nitrosomonas sp. AL212 phosphoglycerate mutase family protein YP_004295702.1 2713998 D 153948 CDS YP_004295703.1 325983301 10299294 2714828..2716012 1 NC_015222.1 KEGG: nmu:Nmul_A1120 peptidase M23B; manually curated; PFAM: Peptidase M23; peptidase M23 2716012 10299294 NAL212_2753 Nitrosomonas sp. AL212 peptidase M23 YP_004295703.1 2714828 D 153948 CDS YP_004295704.1 325983302 10299295 2716060..2717496 1 NC_015222.1 TIGRFAM: Peptidase S41A, C-terminal peptidase; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: neu:NE1782 carboxy-terminal processing protease; SMART: Peptidase S41; PDZ/DHR/GLGF; carboxyl-terminal protease 2717496 10299295 NAL212_2754 Nitrosomonas sp. AL212 carboxyl-terminal protease YP_004295704.1 2716060 D 153948 CDS YP_004295705.1 325983303 10299296 2717518..2718276 1 NC_015222.1 PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; KEGG: neu:NE1783 NAD binding site:UBA/ThiF-type NAD/FAD binding fold; UBA/THIF-type NAD/FAD binding protein 2718276 10299296 NAL212_2755 Nitrosomonas sp. AL212 UBA/THIF-type NAD/FAD binding protein YP_004295705.1 2717518 D 153948 CDS YP_004295706.1 325983304 10299297 complement(2718312..2718956) 1 NC_015222.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nmu:Nmul_A1117 nucleoid occlusion protein; TetR family transcriptional regulator 2718956 10299297 NAL212_2756 Nitrosomonas sp. AL212 TetR family transcriptional regulator YP_004295706.1 2718312 R 153948 CDS YP_004295707.1 325983305 10299298 2719210..2720064 1 NC_015222.1 KEGG: vpo:Kpol_1041p41 hypothetical protein; hypothetical protein 2720064 10299298 NAL212_2757 Nitrosomonas sp. AL212 hypothetical protein YP_004295707.1 2719210 D 153948 CDS YP_004295708.1 325983306 10299299 complement(2720160..2720468) 1 NC_015222.1 KEGG: tga:TGAM_1426 DNA topoisomerase VI subunit A; DNA topoisomerase VI subunit A 2720468 10299299 NAL212_2758 Nitrosomonas sp. AL212 DNA topoisomerase VI subunit A YP_004295708.1 2720160 R 153948 CDS YP_004295709.1 325983307 10299300 complement(2720473..2720763) 1 NC_015222.1 KEGG: mkm:Mkms_0973 acyltransferase 3; hypothetical protein 2720763 10299300 NAL212_2759 Nitrosomonas sp. AL212 hypothetical protein YP_004295709.1 2720473 R 153948 CDS YP_004295710.1 325983308 10299301 complement(2720952..2721287) 1 NC_015222.1 KEGG: vsp:VS_II0451 hypothetical protein; hypothetical protein 2721287 10299301 NAL212_2760 Nitrosomonas sp. AL212 hypothetical protein YP_004295710.1 2720952 R 153948 CDS YP_004295711.1 325983309 10299302 complement(2721310..2721528) 1 NC_015222.1 KEGG: pna:Pnap_3867 hypothetical protein; hypothetical protein 2721528 10299302 NAL212_2761 Nitrosomonas sp. AL212 hypothetical protein YP_004295711.1 2721310 R 153948 CDS YP_004295712.1 325983310 10299303 complement(2721525..2721959) 1 NC_015222.1 KEGG: neu:NE0971 hypothetical protein; hypothetical protein 2721959 10299303 NAL212_2762 Nitrosomonas sp. AL212 hypothetical protein YP_004295712.1 2721525 R 153948 CDS YP_004295713.1 325983311 10299304 complement(2722062..2722382) 1 NC_015222.1 PFAM: Small multidrug resistance protein; KEGG: gsu:GSU0707 SugE protein; small multidrug resistance protein 2722382 10299304 NAL212_2763 Nitrosomonas sp. AL212 small multidrug resistance protein YP_004295713.1 2722062 R 153948 CDS YP_004295714.1 325983312 10299305 complement(2722507..2724306) 1 NC_015222.1 KEGG: rhi:NGR_a03200 hypothetical 47.1 kDa protein; hypothetical protein 2724306 10299305 NAL212_2764 Nitrosomonas sp. AL212 hypothetical protein YP_004295714.1 2722507 R 153948 CDS YP_004295715.1 325983313 10299306 complement(2724339..2725814) 1 NC_015222.1 TIGRFAM: Glycogen/starch synthases, ADP-glucose type; KEGG: net:Neut_0608 glycogen/starch synthases, ADP-glucose type; PFAM: Starch synthase, catalytic domain; Glycosyl transferase, group 1; glycogen/starch synthase 2725814 10299306 NAL212_2765 Nitrosomonas sp. AL212 glycogen/starch synthase YP_004295715.1 2724339 R 153948 CDS YP_004295716.1 325983314 10299307 complement(2725826..2727460) 1 NC_015222.1 KEGG: neu:NE2263 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI); glucose-6-phosphate isomerase 2727460 10299307 NAL212_2766 Nitrosomonas sp. AL212 glucose-6-phosphate isomerase YP_004295716.1 2725826 R 153948 CDS YP_004295717.1 325983315 10299308 complement(2727509..2729515) 1 NC_015222.1 KEGG: neu:NE2032 glycosy hydrolase family protein; PFAM: Alpha-amylase/4-alpha-glucanotransferase, C-terminal; Alpha-amylase/4-alpha-glucanotransferase, central domain; Glycoside hydrolase, family 57, N-terminal; 4-alpha-glucanotransferase 2729515 10299308 NAL212_2767 Nitrosomonas sp. AL212 4-alpha-glucanotransferase YP_004295717.1 2727509 R 153948 CDS YP_004295718.1 325983316 10299309 complement(2729591..2731303) 1 NC_015222.1 PFAM: Glycoside hydrolase, family 57, N-terminal; KEGG: nmu:Nmul_A0719 glycoside hydrolase family protein; glycoside hydrolase family protein 2731303 10299309 NAL212_2768 Nitrosomonas sp. AL212 glycoside hydrolase family protein YP_004295718.1 2729591 R 153948 CDS YP_004295719.1 325983317 10299310 complement(2731440..2732756) 1 NC_015222.1 TIGRFAM: Glucose-1-phosphate adenylyltransferase; KEGG: neu:NE2030 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate adenylyltransferase 2732756 10299310 NAL212_2769 Nitrosomonas sp. AL212 glucose-1-phosphate adenylyltransferase YP_004295719.1 2731440 R 153948 CDS YP_004295720.1 325983318 10299311 2732905..2735103 1 NC_015222.1 TIGRFAM: 1,4-alpha-glucan-branching enzyme; KEGG: net:Neut_1291 glycogen branching enzyme; PFAM: Glycoside hydrolase, family 13, N-terminal; Alpha-amylase, C-terminal all beta; Glycosyl hydrolase, family 13, catalytic domain; 1,4-alpha-glucan-branching protein 2735103 10299311 NAL212_2770 Nitrosomonas sp. AL212 1,4-alpha-glucan-branching protein YP_004295720.1 2732905 D 153948 CDS YP_004295721.1 325983319 10299312 complement(2735125..2735457) 1 NC_015222.1 PFAM: Small multidrug resistance protein; KEGG: dal:Dalk_0650 small multidrug resistance protein; small multidrug resistance protein 2735457 10299312 NAL212_2771 Nitrosomonas sp. AL212 small multidrug resistance protein YP_004295721.1 2735125 R 153948 CDS YP_004295722.1 325983320 10299313 complement(2735565..2736200) 1 NC_015222.1 PFAM: PEP-CTERM bacterial; KEGG: mei:Msip34_1313 protein of unknown function DUF1555; hypothetical protein 2736200 10299313 NAL212_2772 Nitrosomonas sp. AL212 hypothetical protein YP_004295722.1 2735565 R 153948 CDS YP_004295723.1 325983321 10299314 2736843..2737040 1 NC_015222.1 KEGG: hba:Hbal_1382 SmpA/OmlA domain protein; hypothetical protein 2737040 10299314 NAL212_2773 Nitrosomonas sp. AL212 hypothetical protein YP_004295723.1 2736843 D 153948 CDS YP_004295724.1 325983322 10299315 2738044..2738268 1 NC_015222.1 KEGG: nmu:Nmul_A1140 hypothetical protein; hypothetical protein 2738268 10299315 NAL212_2774 Nitrosomonas sp. AL212 hypothetical protein YP_004295724.1 2738044 D 153948 CDS YP_004295725.1 325983323 10299316 2738866..2740938 1 NC_015222.1 KEGG: cja:CJA_3563 hypothetical protein; hypothetical protein 2740938 10299316 NAL212_2775 Nitrosomonas sp. AL212 hypothetical protein YP_004295725.1 2738866 D 153948 CDS YP_004295726.1 325983324 10299317 2740984..2742258 1 NC_015222.1 PFAM: Cytochrome P450; KEGG: xau:Xaut_0387 cytochrome P450; cytochrome P450 2742258 10299317 NAL212_2776 Nitrosomonas sp. AL212 cytochrome P450 YP_004295726.1 2740984 D 153948 CDS YP_004295727.1 325983325 10299318 2742990..2743883 1 NC_015222.1 KEGG: ppr:PBPRB1378 hypothetical protein; hypothetical protein 2743883 10299318 NAL212_2777 Nitrosomonas sp. AL212 hypothetical protein YP_004295727.1 2742990 D 153948 CDS YP_004295728.1 325983326 10299319 2744032..2744721 1 NC_015222.1 KEGG: mxa:MXAN_7123 sensor histidine kinase; hypothetical protein 2744721 10299319 NAL212_2778 Nitrosomonas sp. AL212 hypothetical protein YP_004295728.1 2744032 D 153948 CDS YP_004295729.1 325983327 10299320 complement(2744878..2745621) 1 NC_015222.1 SMART: Cyclic nucleotide-binding domain; KEGG: rfr:Rfer_1647 CRP/FNR family transcriptional regulator; CarD family transcriptional regulator 2745621 10299320 NAL212_2779 Nitrosomonas sp. AL212 CarD family transcriptional regulator YP_004295729.1 2744878 R 153948 CDS YP_004295730.1 325983328 10299321 complement(2746022..2746507) 1 NC_015222.1 KEGG: mta:Moth_0961 ABC-type transport system involved in multi-copper enzyme maturation, permease component; hypothetical protein 2746507 10299321 NAL212_2780 Nitrosomonas sp. AL212 hypothetical protein YP_004295730.1 2746022 R 153948 CDS YP_004295731.1 325983329 10299322 complement(2746525..2746812) 1 NC_015222.1 PFAM: Protein of unknown function DUF883, ElaB; KEGG: pbr:PB2503_10114 hypothetical protein; hypothetical protein 2746812 10299322 NAL212_2781 Nitrosomonas sp. AL212 hypothetical protein YP_004295731.1 2746525 R 153948 CDS YP_004295732.1 325983330 10299324 complement(2747369..2748457) 1 NC_015222.1 PFAM: Uncharacterised protein family UPF0118; KEGG: mmb:Mmol_2085 protein of unknown function UPF0118; hypothetical protein 2748457 10299324 NAL212_2783 Nitrosomonas sp. AL212 hypothetical protein YP_004295732.1 2747369 R 153948 CDS YP_004295733.1 325983331 10299325 complement(2748632..2749834) 1 NC_015222.1 PFAM: Catalase-related subgroup; KEGG: abb:ABBFA_001723 hypothetical protein; catalase related subgroup domain-containing protein 2749834 10299325 NAL212_2784 Nitrosomonas sp. AL212 catalase related subgroup domain-containing protein YP_004295733.1 2748632 R 153948 CDS YP_004295734.1 325983332 10299326 complement(2750173..2750928) 1 NC_015222.1 PFAM: Integral membrane protein TerC; KEGG: nde:NIDE3790 membrane protein TerC; integral membrane protein TerC 2750928 10299326 NAL212_2785 Nitrosomonas sp. AL212 integral membrane protein TerC YP_004295734.1 2750173 R 153948 CDS YP_004295735.1 325983333 10299327 complement(2751207..2751683) 1 NC_015222.1 KEGG: geo:Geob_3784 hypothetical protein; hypothetical protein 2751683 10299327 NAL212_2786 Nitrosomonas sp. AL212 hypothetical protein YP_004295735.1 2751207 R 153948 CDS YP_004295736.1 325983334 10299328 complement(2752116..2752403) 1 NC_015222.1 KEGG: sfr:Sfri_2036 hypothetical protein; hypothetical protein 2752403 10299328 NAL212_2787 Nitrosomonas sp. AL212 hypothetical protein YP_004295736.1 2752116 R 153948 CDS YP_004295737.1 325983335 10299329 complement(2752545..2752847) 1 NC_015222.1 KEGG: net:Neut_2358 hypothetical protein; hypothetical protein 2752847 10299329 NAL212_2788 Nitrosomonas sp. AL212 hypothetical protein YP_004295737.1 2752545 R 153948 CDS YP_004295738.1 325983336 10299330 complement(2752879..2753079) 1 NC_015222.1 PFAM: CsbD-like; KEGG: net:Neut_2359 CsbD family protein; CsbD family protein 2753079 10299330 NAL212_2789 Nitrosomonas sp. AL212 CsbD family protein YP_004295738.1 2752879 R 153948 CDS YP_004295739.1 325983337 10299331 complement(2753197..2753400) 1 NC_015222.1 KEGG: net:Neut_2360 hypothetical protein; HAMAP: Protein of unknown function DUF1328; PFAM: Protein of unknown function DUF1328; hypothetical protein 2753400 10299331 NAL212_2790 Nitrosomonas sp. AL212 hypothetical protein YP_004295739.1 2753197 R 153948 CDS YP_004295740.1 325983338 10299332 complement(2753851..2754051) 1 NC_015222.1 PFAM: CsbD-like; KEGG: net:Neut_2359 CsbD family protein; CsbD family protein 2754051 10299332 NAL212_2791 Nitrosomonas sp. AL212 CsbD family protein YP_004295740.1 2753851 R 153948 CDS YP_004295741.1 325983339 10299333 2754465..2754728 1 NC_015222.1 KEGG: pva:Pvag_0471 uncharacterized protein YohN precursor; hypothetical protein 2754728 10299333 NAL212_2792 Nitrosomonas sp. AL212 hypothetical protein YP_004295741.1 2754465 D 153948 CDS YP_004295742.1 325983340 10299334 2755230..2756726 1 NC_015222.1 KEGG: mea:Mex_1p1410 hypothetical protein; hypothetical protein 2756726 10299334 NAL212_2793 Nitrosomonas sp. AL212 hypothetical protein YP_004295742.1 2755230 D 153948 CDS YP_004295743.1 325983341 10299335 complement(2756878..2758200) 1 NC_015222.1 PFAM: Protein of unknown function DUF1597; KEGG: nmu:Nmul_A0438 hypothetical protein; hypothetical protein 2758200 10299335 NAL212_2794 Nitrosomonas sp. AL212 hypothetical protein YP_004295743.1 2756878 R 153948 CDS YP_004295744.1 325983342 10299336 2758396..2759508 1 NC_015222.1 PFAM: Lytic transglycosylase-like, catalytic; KEGG: mca:MCA2115 transglycosylase SLT domain-containing protein; Lytic transglycosylase catalytic 2759508 10299336 NAL212_2795 Nitrosomonas sp. AL212 Lytic transglycosylase catalytic YP_004295744.1 2758396 D 153948 CDS YP_004295745.1 325983343 10299337 complement(2759527..2760885) 1 NC_015222.1 KEGG: tgr:Tgr7_0333 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; succinate-semialdehyde dehydrogenase 2760885 10299337 NAL212_2796 Nitrosomonas sp. AL212 succinate-semialdehyde dehydrogenase YP_004295745.1 2759527 R 153948 CDS YP_004295746.1 325983344 10299338 complement(2760973..2761194) 1 NC_015222.1 PFAM: Protein of unknown function DUF2798; KEGG: jan:Jann_0888 hypothetical protein; hypothetical protein 2761194 10299338 NAL212_2797 Nitrosomonas sp. AL212 hypothetical protein YP_004295746.1 2760973 R 153948 CDS YP_004295747.1 325983345 10299339 complement(2761471..2762208) 1 NC_015222.1 SMART: Exonuclease; TIGRFAM: DNA polymerase 3, epsilon subunit; DNA polymerase III, epsilon subunit; KEGG: net:Neut_2175 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; DNA polymerase III subunit epsilon 2762208 10299339 NAL212_2798 Nitrosomonas sp. AL212 DNA polymerase III subunit epsilon YP_004295747.1 2761471 R 153948 CDS YP_004295748.1 325983346 10299340 complement(2762234..2762689) 1 NC_015222.1 KEGG: nmu:Nmul_A1619 ribonuclease H; PFAM: Ribonuclease H domain; ribonuclease H 2762689 10299340 NAL212_2799 Nitrosomonas sp. AL212 ribonuclease H YP_004295748.1 2762234 R 153948 CDS YP_004295749.1 325983347 10299341 complement(2762692..2763462) 1 NC_015222.1 PFAM: Methyltransferase type 11; KEGG: nmu:Nmul_A1620 generic methyl-transferase; type 11 methyltransferase 2763462 10299341 NAL212_2800 Nitrosomonas sp. AL212 type 11 methyltransferase YP_004295749.1 2762692 R 153948 CDS YP_004295750.1 325983348 10299342 2763557..2764330 1 NC_015222.1 SMART: Beta-lactamase-like; TIGRFAM: Hydroxyacylglutathione hydrolase; KEGG: neu:NE0138 metallo-beta-lactamase superfamily protein; PFAM: Beta-lactamase-like; hydroxyacylglutathione hydrolase 2764330 10299342 NAL212_2801 Nitrosomonas sp. AL212 hydroxyacylglutathione hydrolase YP_004295750.1 2763557 D 153948 CDS YP_004295751.1 325983349 10299343 complement(2764471..2766165) 1 NC_015222.1 PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; HAMAP: Glutaminyl-tRNA synthetase, bacterial; KEGG: nmu:Nmul_A2083 glutaminyl-tRNA synthetase; glutaminyl-tRNA synthetase 2766165 10299343 NAL212_2802 Nitrosomonas sp. AL212 glutaminyl-tRNA synthetase YP_004295751.1 2764471 R 153948 CDS YP_004295752.1 325983350 10299344 2766455..2766889 1 NC_015222.1 KEGG: net:Neut_0762 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13; 50S ribosomal protein L13 2766889 10299344 NAL212_2803 Nitrosomonas sp. AL212 50S ribosomal protein L13 YP_004295752.1 2766455 D 153948 CDS YP_004295753.1 325983351 10299345 2766894..2767286 1 NC_015222.1 KEGG: neu:NE1483 30S ribosomal protein S9; manually curated; PFAM: Ribosomal protein S9; 30S ribosomal protein S9 2767286 10299345 NAL212_2804 Nitrosomonas sp. AL212 30S ribosomal protein S9 YP_004295753.1 2766894 D 153948 CDS YP_004295754.1 325983352 10299346 2767397..2768425 1 NC_015222.1 SMART: Semialdehyde dehydrogenase, NAD-binding; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; KEGG: neu:NE1482 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation domain; N-acetyl-gamma-glutamyl-phosphate reductase 2768425 10299346 NAL212_2805 Nitrosomonas sp. AL212 N-acetyl-gamma-glutamyl-phosphate reductase YP_004295754.1 2767397 D 153948 CDS YP_004295755.1 325983353 10299347 2768618..2769220 1 NC_015222.1 KEGG: neu:NE1481 hypothetical protein; hypothetical protein 2769220 10299347 NAL212_2806 Nitrosomonas sp. AL212 hypothetical protein YP_004295755.1 2768618 D 153948 CDS YP_004295756.1 325983354 10299348 2769233..2769697 1 NC_015222.1 PFAM: Protein of unknown function DUF583; KEGG: slt:Slit_2453 protein of unknown function DUF583; hypothetical protein 2769697 10299348 NAL212_2807 Nitrosomonas sp. AL212 hypothetical protein YP_004295756.1 2769233 D 153948 CDS YP_004295757.1 325983355 10299349 2769755..2770099 1 NC_015222.1 KEGG: nmu:Nmul_A0556 HesB/YadR/YfhF; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; iron-sulfur cluster assembly accessory protein 2770099 10299349 NAL212_2808 Nitrosomonas sp. AL212 iron-sulfur cluster assembly accessory protein YP_004295757.1 2769755 D 153948 CDS YP_004295758.1 325983356 10299350 complement(2770122..2771201) 1 NC_015222.1 PFAM: Anhydro-N-acetylmuramic acid kinase; KEGG: neu:NE1429 anhydro-N-acetylmuramic acid kinase; hypothetical protein 2771201 10299350 NAL212_2809 Nitrosomonas sp. AL212 hypothetical protein YP_004295758.1 2770122 R 153948 CDS YP_004295759.1 325983357 10299351 complement(2771324..2772661) 1 NC_015222.1 PFAM: Peptidase M23; KEGG: neu:NE1430 M23/M37 familypeptidase; peptidase M23 2772661 10299351 NAL212_2810 Nitrosomonas sp. AL212 peptidase M23 YP_004295759.1 2771324 R 153948 CDS YP_004295760.1 325983358 10299352 2772805..2774007 1 NC_015222.1 KEGG: nmu:Nmul_A0502 tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; RNA-binding S4; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib; HAMAP: Tyrosyl-tRNA synthetase, class Ib; SMART: RNA-binding S4; tyrosyl-tRNA synthetase 2774007 10299352 NAL212_2811 Nitrosomonas sp. AL212 tyrosyl-tRNA synthetase YP_004295760.1 2772805 D 153948 CDS YP_004295761.1 325983359 10299353 2774277..2775650 1 NC_015222.1 KEGG: nmu:Nmul_A1799 DEAD/DEAH box helicase-like; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 2775650 10299353 NAL212_2812 Nitrosomonas sp. AL212 DEAD/DEAH box helicase domain-containing protein YP_004295761.1 2774277 D 153948 CDS YP_004295762.1 325983360 10299354 complement(2775974..2776834) 1 NC_015222.1 KEGG: cch:Cag_0532 hypothetical protein; hypothetical protein 2776834 10299354 NAL212_2813 Nitrosomonas sp. AL212 hypothetical protein YP_004295762.1 2775974 R 153948 CDS YP_004295763.1 325983361 10299355 2777362..2778876 1 NC_015222.1 TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; PAS fold; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: npu:Npun_F3797 multi-sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; PAC motif; PAS/PAC sensor signal transduction histidine kinase 2778876 10299355 NAL212_2814 Nitrosomonas sp. AL212 PAS/PAC sensor signal transduction histidine kinase YP_004295763.1 2777362 D 153948 CDS YP_004295764.1 325983362 10299356 2778886..2779518 1 NC_015222.1 KEGG: cpi:Cpin_3979 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; two component transcriptional regulator, LuxR family 2779518 10299356 NAL212_2815 Nitrosomonas sp. AL212 two component transcriptional regulator, LuxR family YP_004295764.1 2778886 D 153948 CDS YP_004295765.1 325983363 10299357 2779755..2780822 1 NC_015222.1 PFAM: Diacylglycerol kinase, catalytic domain; KEGG: mpt:Mpe_A2183 hypothetical protein; diacylglycerol kinase catalytic subunit 2780822 10299357 NAL212_2816 Nitrosomonas sp. AL212 diacylglycerol kinase catalytic subunit YP_004295765.1 2779755 D 153948 CDS YP_004295766.1 325983364 10299358 2780840..2781682 1 NC_015222.1 PFAM: Metallo-dependent phosphatase; KEGG: mpt:Mpe_A2182 putative DNA repair exonuclease; metallophosphoesterase 2781682 10299358 NAL212_2817 Nitrosomonas sp. AL212 metallophosphoesterase YP_004295766.1 2780840 D 153948 CDS YP_004295767.1 325983365 10299359 2781766..2782653 1 NC_015222.1 KEGG: nmu:Nmul_A2766 ammonia monooxygenase/methane monooxygenase, subunit C; TIGRFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; PFAM: Ammonia monooxygenase/particulate methane monooxygenase, subunit C; methane monooxygenase/ammonia monooxygenase subunit C 2782653 10299359 NAL212_2818 Nitrosomonas sp. AL212 methane monooxygenase/ammonia monooxygenase subunit C YP_004295767.1 2781766 D 153948 CDS YP_004295768.1 325983366 10299360 2782768..2783319 1 NC_015222.1 KEGG: nmu:Nmul_A1398 hypothetical protein; hypothetical protein 2783319 10299360 NAL212_2819 Nitrosomonas sp. AL212 hypothetical protein YP_004295768.1 2782768 D 153948 CDS YP_004295769.1 325983367 10299361 complement(2783418..2783963) 1 NC_015222.1 KEGG: net:Neut_2282 proline-rich region; proline-rich region 2783963 10299361 NAL212_2820 Nitrosomonas sp. AL212 proline-rich region YP_004295769.1 2783418 R 153948 CDS YP_004295770.1 325983368 10299362 2784389..2785375 1 NC_015222.1 KEGG: neu:NE0773 malate dehydrogenase; TIGRFAM: Malate dehydrogenase, NAD/NADP; PFAM: Lactate/malate dehydrogenase, C-terminal; Lactate/malate dehydrogenase, N-terminal; malate dehydrogenase 2785375 10299362 NAL212_2821 Nitrosomonas sp. AL212 malate dehydrogenase YP_004295770.1 2784389 D 153948 CDS YP_004295771.1 325983369 10299363 complement(2785414..2786634) 1 NC_015222.1 KEGG: hch:HCH_02605 membrane-bound lytic murein transglycosylase B; TIGRFAM: Lytic murein transglycosylase; PFAM: Peptidoglycan binding-like; lytic murein transglycosylase 2786634 10299363 NAL212_2822 Nitrosomonas sp. AL212 lytic murein transglycosylase YP_004295771.1 2785414 R 153948 CDS YP_004295772.1 325983370 10299364 complement(2786691..2787131) 1 NC_015222.1 PFAM: Ferric-uptake regulator; KEGG: neu:NE0616 leucine-rich repeat-containing ferric uptake regulator; ferric uptake regulator, Fur family 2787131 10299364 NAL212_2823 Nitrosomonas sp. AL212 ferric uptake regulator, Fur family YP_004295772.1 2786691 R 153948 CDS YP_004295773.1 325983371 10299365 2787207..2787608 1 NC_015222.1 PFAM: Lipoprotein SmpA/OmlA; KEGG: nmu:Nmul_A0476 SmpA/OmlA; SmpA/OmlA domain-containing protein 2787608 10299365 NAL212_2824 Nitrosomonas sp. AL212 SmpA/OmlA domain-containing protein YP_004295773.1 2787207 D 153948 CDS YP_004295774.1 325983372 10299366 2787664..2788470 1 NC_015222.1 TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; KEGG: net:Neut_1940 dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase, C-terminal; Dihydrodipicolinate reductase, N-terminal; dihydrodipicolinate reductase 2788470 10299366 NAL212_2825 Nitrosomonas sp. AL212 dihydrodipicolinate reductase YP_004295774.1 2787664 D 153948 CDS YP_004295775.1 325983373 10299367 2788482..2789285 1 NC_015222.1 PFAM: Metallo-dependent phosphatase; TIGRFAM: Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); KEGG: nmu:Nmul_A0206 diadenosine tetraphosphatase; HAMAP: Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); bis(5'-nucleosyl)-tetraphosphatase, symmetrical 2789285 10299367 NAL212_2826 Nitrosomonas sp. AL212 bis(5'-nucleosyl)-tetraphosphatase, symmetrical YP_004295775.1 2788482 D 153948 CDS YP_004295776.1 325983374 10299368 complement(2789236..2790030) 1 NC_015222.1 KEGG: neu:NE0612 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 2790030 10299368 NAL212_2827 Nitrosomonas sp. AL212 phospholipid/glycerol acyltransferase YP_004295776.1 2789236 R 153948 CDS YP_004295777.1 325983375 10299369 complement(2790190..2790507) 1 NC_015222.1 PFAM: Domain of unknown function DUF190; KEGG: tal:Thal_0656 nitrogen regulatory protein P-II; hypothetical protein 2790507 10299369 NAL212_2828 Nitrosomonas sp. AL212 hypothetical protein YP_004295777.1 2790190 R 153948 CDS YP_004295778.1 325983376 10299370 complement(2790557..2791513) 1 NC_015222.1 PFAM: Protein of unknown function DUF897; KEGG: tkm:TK90_0845 protein of unknown function DUF897; hypothetical protein 2791513 10299370 NAL212_2829 Nitrosomonas sp. AL212 hypothetical protein YP_004295778.1 2790557 R 153948 CDS YP_004295779.1 325983377 10299371 complement(2791814..2793088) 1 NC_015222.1 KEGG: nmu:Nmul_A0707 periplasmic sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; integral membrane sensor signal transduction histidine kinase 2793088 10299371 NAL212_2830 Nitrosomonas sp. AL212 integral membrane sensor signal transduction histidine kinase YP_004295779.1 2791814 R 153948 CDS YP_004295780.1 325983378 10299372 complement(2793069..2793758) 1 NC_015222.1 KEGG: nmu:Nmul_A0706 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; two component transcriptional regulator, winged helix family 2793758 10299372 NAL212_2831 Nitrosomonas sp. AL212 two component transcriptional regulator, winged helix family YP_004295780.1 2793069 R 153948 CDS YP_004295781.1 325983379 10299373 complement(2793788..2794861) 1 NC_015222.1 TIGRFAM: Uroporphyrinogen decarboxylase HemE; KEGG: nmu:Nmul_A0705 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 2794861 10299373 NAL212_2832 Nitrosomonas sp. AL212 uroporphyrinogen decarboxylase YP_004295781.1 2793788 R 153948 CDS YP_004295782.1 325983380 10299374 2794932..2795144 1 NC_015222.1 KEGG: psa:PST_1428 lipoprotein; hypothetical protein 2795144 10299374 NAL212_2833 Nitrosomonas sp. AL212 hypothetical protein YP_004295782.1 2794932 D 153948 CDS YP_004295783.1 325983381 10299375 complement(2795172..2796293) 1 NC_015222.1 TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; KEGG: nmu:Nmul_A0704 deoxyguanosinetriphosphate triphosphohydrolase-like protein; SMART: Metal-dependent phosphohydrolase, HD domain; deoxyguanosinetriphosphate triphosphohydrolase 2796293 10299375 NAL212_2834 Nitrosomonas sp. AL212 deoxyguanosinetriphosphate triphosphohydrolase YP_004295783.1 2795172 R 153948 CDS YP_004295784.1 325983382 10299376 complement(2796286..2797965) 1 NC_015222.1 PFAM: 3-dehydroquinate synthase AroB; Shikimate kinase; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; HAMAP: Shikimate kinase; 3-dehydroquinate synthase AroB, subgroup; KEGG: slt:Slit_0113 3-dehydroquinate synthase; shikimate kinase 2797965 10299376 NAL212_2835 Nitrosomonas sp. AL212 shikimate kinase YP_004295784.1 2796286 R 153948 CDS YP_004295785.1 325983383 10299377 complement(2798260..2799318) 1 NC_015222.1 TIGRFAM: Conserved hypothetical protein CHP03032; KEGG: npu:Npun_F1456 hypothetical protein; hypothetical protein 2799318 10299377 NAL212_2836 Nitrosomonas sp. AL212 hypothetical protein YP_004295785.1 2798260 R 153948 CDS YP_004295786.1 325983384 10299378 complement(2799477..2805221) 1 NC_015222.1 PFAM: FG-GAP; Haemolysin-type calcium-binding repeat; KEGG: syf:Synpcc7942_1337 integrins alpha chain; FG-GAP repeat-containing protein 2805221 10299378 NAL212_2837 Nitrosomonas sp. AL212 FG-GAP repeat-containing protein YP_004295786.1 2799477 R 153948 CDS YP_004295787.1 325983385 10299379 2805804..2806184 1 NC_015222.1 KEGG: nmu:Nmul_A1625 hypothetical protein; hypothetical protein 2806184 10299379 NAL212_2838 Nitrosomonas sp. AL212 hypothetical protein YP_004295787.1 2805804 D 153948 CDS YP_004295788.1 325983386 10299380 complement(2806340..2810197) 1 NC_015222.1 KEGG: syc:syc0216_c hypothetical protein; PFAM: FG-GAP; Haemolysin-type calcium-binding repeat; SMART: Integrin alpha beta-propellor; FG-GAP repeat-containing protein 2810197 10299380 NAL212_2839 Nitrosomonas sp. AL212 FG-GAP repeat-containing protein YP_004295788.1 2806340 R 153948 CDS YP_004295789.1 325983387 10299381 complement(2810293..2811330) 1 NC_015222.1 PFAM: FG-GAP; KEGG: npu:Npun_F4869 putative outer membrane adhesin like proteiin; FG-GAP repeat-containing protein 2811330 10299381 NAL212_2840 Nitrosomonas sp. AL212 FG-GAP repeat-containing protein YP_004295789.1 2810293 R 153948 CDS YP_004295790.1 325983388 10299382 2811407..2812300 1 NC_015222.1 KEGG: ppr:PBPRB1378 hypothetical protein; hypothetical protein 2812300 10299382 NAL212_2841 Nitrosomonas sp. AL212 hypothetical protein YP_004295790.1 2811407 D 153948 CDS YP_004295791.1 325983389 10299383 complement(2812276..2815221) 1 NC_015222.1 KEGG: syf:Synpcc7942_1337 integrins alpha chain; PFAM: FG-GAP; Haemolysin-type calcium-binding repeat; SMART: Integrin alpha beta-propellor; FG-GAP repeat-containing protein 2815221 10299383 NAL212_2842 Nitrosomonas sp. AL212 FG-GAP repeat-containing protein YP_004295791.1 2812276 R 153948 CDS YP_004295792.1 325983390 10299384 2815805..2816185 1 NC_015222.1 KEGG: nmu:Nmul_A1625 hypothetical protein; hypothetical protein 2816185 10299384 NAL212_2843 Nitrosomonas sp. AL212 hypothetical protein YP_004295792.1 2815805 D 153948 CDS YP_004295793.1 325983391 10299385 complement(2816292..2818247) 1 NC_015222.1 KEGG: npu:Npun_R5402 FG-GAP repeat-containing protein; PFAM: FG-GAP; SMART: Integrin alpha beta-propellor; FG-GAP repeat-containing protein 2818247 10299385 NAL212_2844 Nitrosomonas sp. AL212 FG-GAP repeat-containing protein YP_004295793.1 2816292 R 153948 CDS YP_004295794.1 325983392 10299386 complement(2818395..2819993) 1 NC_015222.1 KEGG: syf:Synpcc7942_1337 integrins alpha chain; PFAM: FG-GAP; Haemolysin-type calcium-binding repeat; SMART: Integrin alpha beta-propellor; FG-GAP repeat-containing protein 2819993 10299386 NAL212_2845 Nitrosomonas sp. AL212 FG-GAP repeat-containing protein YP_004295794.1 2818395 R 153948 CDS YP_004295795.1 325983393 10299387 complement(2819990..2820388) 1 NC_015222.1 KEGG: syf:Synpcc7942_1337 integrins alpha chain; PFAM: FG-GAP; SMART: Integrin alpha beta-propellor; FG-GAP repeat-containing protein 2820388 10299387 NAL212_2846 Nitrosomonas sp. AL212 FG-GAP repeat-containing protein YP_004295795.1 2819990 R 153948 CDS YP_004295796.1 325983394 10299388 complement(2820535..2822487) 1 NC_015222.1 KEGG: syf:Synpcc7942_1337 integrins alpha chain; PFAM: Haemolysin-type calcium-binding repeat; FG-GAP; SMART: Integrin alpha beta-propellor; hemolysin-type calcium-binding protein 2822487 10299388 NAL212_2847 Nitrosomonas sp. AL212 hemolysin-type calcium-binding protein YP_004295796.1 2820535 R 153948 CDS YP_004295797.1 325983395 10299389 complement(2822636..2824612) 1 NC_015222.1 KEGG: syf:Synpcc7942_1337 integrins alpha chain; PFAM: FG-GAP; Haemolysin-type calcium-binding repeat; SMART: Integrin alpha beta-propellor; FG-GAP repeat-containing protein 2824612 10299389 NAL212_2848 Nitrosomonas sp. AL212 FG-GAP repeat-containing protein YP_004295797.1 2822636 R 153948 CDS YP_004295798.1 325983396 10299390 complement(2824911..2828069) 1 NC_015222.1 KEGG: nmu:Nmul_A0691 hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 2828069 10299390 NAL212_2849 Nitrosomonas sp. AL212 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004295798.1 2824911 R 153948 CDS YP_004295799.1 325983397 10299391 complement(2828085..2829272) 1 NC_015222.1 KEGG: nmu:Nmul_A0692 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 2829272 10299391 NAL212_2850 Nitrosomonas sp. AL212 RND family efflux transporter MFP subunit YP_004295799.1 2828085 R 153948 CDS YP_004295800.1 325983398 10299392 complement(2829277..2829489) 1 NC_015222.1 KEGG: lac:LBA0839 competence protein; hypothetical protein 2829489 10299392 NAL212_2851 Nitrosomonas sp. AL212 hypothetical protein YP_004295800.1 2829277 R 153948 CDS YP_004295801.1 325983399 10299393 2829572..2831281 1 NC_015222.1 PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 1; KEGG: net:Neut_1872 multicopper oxidase, type 3; multicopper oxidase type 3 2831281 10299393 NAL212_2852 Nitrosomonas sp. AL212 multicopper oxidase type 3 YP_004295801.1 2829572 D 153948 CDS YP_004295802.1 325983400 10299394 2831281..2832294 1 NC_015222.1 PFAM: Multicopper oxidase, type 2; KEGG: net:Neut_1873 hypothetical protein; multicopper oxidase type 2 2832294 10299394 NAL212_2853 Nitrosomonas sp. AL212 multicopper oxidase type 2 YP_004295802.1 2831281 D 153948 CDS YP_004295803.1 325983401 10299395 complement(2832375..2832851) 1 NC_015222.1 KEGG: nde:NIDE3458 hypothetical protein; hypothetical protein 2832851 10299395 NAL212_2854 Nitrosomonas sp. AL212 hypothetical protein YP_004295803.1 2832375 R 153948 CDS YP_004295804.1 325983402 10299396 complement(2832929..2833258) 1 NC_015222.1 PFAM: Protein of unknown function DUF3467; KEGG: nde:NIDE3458 hypothetical protein; hypothetical protein 2833258 10299396 NAL212_2855 Nitrosomonas sp. AL212 hypothetical protein YP_004295804.1 2832929 R 153948 CDS YP_004295805.1 325983403 10299397 2833713..2835020 1 NC_015222.1 KEGG: cyj:Cyan7822_0595 Na-Ca exchanger/integrin-beta4; Na-Ca exchanger/integrin-beta4 2835020 10299397 NAL212_2856 Nitrosomonas sp. AL212 Na-Ca exchanger/integrin-beta4 YP_004295805.1 2833713 D 153948 CDS YP_004295806.1 325983404 10299398 complement(2835170..2836330) 1 NC_015222.1 KEGG: pna:Pnap_3396 DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; heat shock protein DnaJ domain-containing protein 2836330 10299398 NAL212_2857 Nitrosomonas sp. AL212 heat shock protein DnaJ domain-containing protein YP_004295806.1 2835170 R 153948 CDS YP_004295807.1 325983405 10299399 2836512..2837690 1 NC_015222.1 KEGG: gpb:HDN1F_35800 hypothetical protein; PFAM: YkuD domain; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; ErfK/YbiS/YcfS/YnhG family protein 2837690 10299399 NAL212_2858 Nitrosomonas sp. AL212 ErfK/YbiS/YcfS/YnhG family protein YP_004295807.1 2836512 D 153948 CDS YP_004295808.1 325983406 10299400 2837749..2838849 1 NC_015222.1 KEGG: nmu:Nmul_A2166 peptidase T2, asparaginase 2; PFAM: Peptidase T2, asparaginase 2; beta-aspartyl-peptidase 2838849 10299400 NAL212_2859 Nitrosomonas sp. AL212 beta-aspartyl-peptidase YP_004295808.1 2837749 D 153948 CDS YP_004295809.1 325983407 10299401 2838892..2839710 1 NC_015222.1 KEGG: nde:NIDE0147 putative polyphosphate kinase 2; TIGRFAM: Polyphosphate:nucleotide phosphotransferase, PPK2; PFAM: Polyphosphate kinase-2-related; polyphosphate:nucleotide phosphotransferase 2839710 10299401 NAL212_2860 Nitrosomonas sp. AL212 polyphosphate:nucleotide phosphotransferase YP_004295809.1 2838892 D 153948 CDS YP_004295810.1 325983408 10299402 2839765..2841258 1 NC_015222.1 KEGG: mms:mma_1926 hypothetical protein; PFAM: CHAD; Adenylate cyclase; SMART: CHAD; CHAD domain-containing protein 2841258 10299402 NAL212_2861 Nitrosomonas sp. AL212 CHAD domain-containing protein YP_004295810.1 2839765 D 153948 CDS YP_004295811.1 325983409 10299403 complement(2841350..2842279) 1 NC_015222.1 PFAM: E3 Ubiquitin ligase; KEGG: neu:NE0281 hypothetical protein; E3 Ubiquitin ligase 2842279 10299403 NAL212_2862 Nitrosomonas sp. AL212 E3 Ubiquitin ligase YP_004295811.1 2841350 R 153948 CDS YP_004295812.1 325983410 10299404 complement(2842295..2842891) 1 NC_015222.1 PFAM: LemA; KEGG: neu:NE0282 hypothetical protein; LemA family protein 2842891 10299404 NAL212_2863 Nitrosomonas sp. AL212 LemA family protein YP_004295812.1 2842295 R 153948 CDS YP_004295813.1 325983411 10299405 2843221..2843592 1 NC_015222.1 KEGG: scl:sce1971 putative lipoprotein; hypothetical protein 2843592 10299405 NAL212_2864 Nitrosomonas sp. AL212 hypothetical protein YP_004295813.1 2843221 D 153948 CDS YP_004295814.1 325983412 10299406 2843874..2844185 1 NC_015222.1 KEGG: hba:Hbal_2037 hypothetical protein; hypothetical protein 2844185 10299406 NAL212_2865 Nitrosomonas sp. AL212 hypothetical protein YP_004295814.1 2843874 D 153948 CDS YP_004295815.1 325983413 10299407 complement(2844312..2844668) 1 NC_015222.1 KEGG: net:Neut_2609 hypothetical protein; hypothetical protein 2844668 10299407 NAL212_2866 Nitrosomonas sp. AL212 hypothetical protein YP_004295815.1 2844312 R 153948 CDS YP_004295816.1 325983414 10299408 complement(2844797..2845486) 1 NC_015222.1 KEGG: net:Neut_2610 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding domain; CarD family transcriptional regulator 2845486 10299408 NAL212_2867 Nitrosomonas sp. AL212 CarD family transcriptional regulator YP_004295816.1 2844797 R 153948 CDS YP_004295817.1 325983415 10299409 2845936..2848197 1 NC_015222.1 TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold; Diguanylate cyclase, predicted; KEGG: meh:M301_2309 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif; GAF; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 2848197 10299409 NAL212_2868 Nitrosomonas sp. AL212 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_004295817.1 2845936 D 153948 CDS YP_004295818.1 325983416 10299411 2849804..2850034 1 NC_015222.1 PFAM: SirA-like; KEGG: nmu:Nmul_A1011 SirA-like; SirA-like domain-containing protein 2850034 10299411 NAL212_2870 Nitrosomonas sp. AL212 SirA-like domain-containing protein YP_004295818.1 2849804 D 153948 CDS YP_004295819.1 325983417 10299412 2850256..2852001 1 NC_015222.1 KEGG: psa:PST_0436 L-lactate permease, putative; TIGRFAM: L-lactate permease; PFAM: L-lactate permease; L-lactate transport 2852001 10299412 NAL212_2871 Nitrosomonas sp. AL212 L-lactate transport YP_004295819.1 2850256 D 153948 CDS YP_004295820.1 325983418 10299413 2852268..2852372 1 NC_015222.1 KEGG: kla:KLLA0F10912g hypothetical protein; hypothetical protein 2852372 10299413 NAL212_2872 Nitrosomonas sp. AL212 hypothetical protein YP_004295820.1 2852268 D 153948 CDS YP_004295821.1 325983419 10299414 2852363..2853373 1 NC_015222.1 PFAM: Protein of unknown function DUF457, transmembrane; KEGG: nhl:Nhal_0110 membrane-bound metal-dependent hydrolase; hypothetical protein 2853373 10299414 NAL212_2873 Nitrosomonas sp. AL212 hypothetical protein YP_004295821.1 2852363 D 153948 CDS YP_004295822.1 325983420 10299415 2853403..2855676 1 NC_015222.1 KEGG: neu:NE1299 guanylate cyclase; PFAM: CHASE2; Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; adenylate/guanylate cyclase with Chase sensor 2855676 10299415 NAL212_2874 Nitrosomonas sp. AL212 adenylate/guanylate cyclase with Chase sensor YP_004295822.1 2853403 D 153948 CDS YP_004295823.1 325983421 10299416 2855769..2859203 1 NC_015222.1 PFAM: FecR protein; TonB-dependent receptor, beta-barrel; KEGG: neu:NE1298 TPR repeat-containing protein; FecR protein 2859203 10299416 NAL212_2875 Nitrosomonas sp. AL212 FecR protein YP_004295823.1 2855769 D 153948 CDS YP_004295824.1 325983422 10299417 2859275..2859568 1 NC_015222.1 KEGG: mdo:100025864 similar to gag protein; hypothetical protein 2859568 10299417 NAL212_2876 Nitrosomonas sp. AL212 hypothetical protein YP_004295824.1 2859275 D 153948 CDS YP_004295825.1 325983423 10299418 2859850..2863146 1 NC_015222.1 PFAM: TonB-dependent receptor, beta-barrel; FecR protein; Tetratricopeptide TPR2; KEGG: neu:NE1298 TPR repeat-containing protein; TonB-dependent receptor 2863146 10299418 NAL212_2877 Nitrosomonas sp. AL212 TonB-dependent receptor YP_004295825.1 2859850 D 153948 CDS YP_004295826.1 325983424 10299419 2863161..2863937 1 NC_015222.1 KEGG: ptm:GSPATT00005658001 hypothetical protein; hypothetical protein 2863937 10299419 NAL212_2878 Nitrosomonas sp. AL212 hypothetical protein YP_004295826.1 2863161 D 153948 CDS YP_004295827.1 325983425 10299420 complement(2864011..2864754) 1 NC_015222.1 KEGG: cur:cur_1585 putative secretory lipase; hypothetical protein 2864754 10299420 NAL212_2879 Nitrosomonas sp. AL212 hypothetical protein YP_004295827.1 2864011 R 153948 CDS YP_004295828.1 325983426 10299421 2864938..2866095 1 NC_015222.1 KEGG: nmu:Nmul_A0675 aminotransferase, class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; cysteine desulfurase 2866095 10299421 NAL212_2880 Nitrosomonas sp. AL212 cysteine desulfurase YP_004295828.1 2864938 D 153948 CDS YP_004295829.1 325983427 10299422 2866187..2866936 1 NC_015222.1 PFAM: Nucleotidyl transferase; KEGG: nmu:Nmul_A0425 nucleotidyl transferase; nucleotidyl transferase 2866936 10299422 NAL212_2881 Nitrosomonas sp. AL212 nucleotidyl transferase YP_004295829.1 2866187 D 153948 CDS YP_004295830.1 325983428 10299423 2866943..2867398 1 NC_015222.1 KEGG: neu:NE0176 hypothetical protein; hypothetical protein 2867398 10299423 NAL212_2882 Nitrosomonas sp. AL212 hypothetical protein YP_004295830.1 2866943 D 153948 CDS YP_004295831.1 325983429 10299424 2867423..2868508 1 NC_015222.1 PFAM: Fatty acid desaturase, type 1; KEGG: nmu:Nmul_A0268 fatty acid desaturase; fatty acid desaturase 2868508 10299424 NAL212_2883 Nitrosomonas sp. AL212 fatty acid desaturase YP_004295831.1 2867423 D 153948 CDS YP_004295832.1 325983430 10299425 2868508..2869248 1 NC_015222.1 SMART: Histidine phosphatase superfamily, clade-1; TIGRFAM: Phosphoglycerate mutase 1; KEGG: nmu:Nmul_A0422 phosphoglycerate mutase 1 family protein; PFAM: Histidine phosphatase superfamily, clade-1; phosphoglycerate mutase family protein 2869248 10299425 NAL212_2884 Nitrosomonas sp. AL212 phosphoglycerate mutase family protein YP_004295832.1 2868508 D 153948 CDS YP_004295833.1 325983431 10299426 2869262..2869792 1 NC_015222.1 manually curated; KEGG: tau:Tola_2812 T/U mismatch-specific DNA glycosylase; T/U mismatch-specific DNA glycosylase 2869792 10299426 NAL212_2885 Nitrosomonas sp. AL212 T/U mismatch-specific DNA glycosylase YP_004295833.1 2869262 D 153948 CDS YP_004295834.1 325983432 10299427 2870143..2871171 1 NC_015222.1 PFAM: VanZ-like; KEGG: dat:HRM2_25480 hypothetical protein; VanZ family protein 2871171 10299427 NAL212_2886 Nitrosomonas sp. AL212 VanZ family protein YP_004295834.1 2870143 D 153948 CDS YP_004295835.1 325983433 10299428 2871260..2872138 1 NC_015222.1 PFAM: DNA methylase N-4/N-6; KEGG: sat:SYN_02042 DNA modification methylase; DNA methylase N-4/N-6 domain-containing protein 2872138 10299428 NAL212_2887 Nitrosomonas sp. AL212 DNA methylase N-4/N-6 domain-containing protein YP_004295835.1 2871260 D 153948 CDS YP_004295836.1 325983434 10299430 complement(2872363..2873262) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit; integrase catalytic region 2873262 10299430 NAL212_2889 Nitrosomonas sp. AL212 integrase catalytic region YP_004295836.1 2872363 R 153948 CDS YP_004295837.1 325983435 10299431 complement(2873262..2873582) 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2873582 10299431 NAL212_2890 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004295837.1 2873262 R 153948 CDS YP_004295838.1 325983436 10299432 complement(2874159..2875616) 1 NC_015222.1 KEGG: mmb:Mmol_1152 hypothetical protein; hypothetical protein 2875616 10299432 NAL212_2891 Nitrosomonas sp. AL212 hypothetical protein YP_004295838.1 2874159 R 153948 CDS YP_004295839.1 325983437 10299433 complement(2875677..2876138) 1 NC_015222.1 PFAM: Protein of unknown function DUF454; KEGG: nmu:Nmul_A0750 hypothetical protein; hypothetical protein 2876138 10299433 NAL212_2892 Nitrosomonas sp. AL212 hypothetical protein YP_004295839.1 2875677 R 153948 CDS YP_004295840.1 325983438 10299434 2876324..2876788 1 NC_015222.1 KEGG: neu:NE0079 FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase); PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; peptidyl-prolyl isomerase 2876788 10299434 NAL212_2893 Nitrosomonas sp. AL212 peptidyl-prolyl isomerase YP_004295840.1 2876324 D 153948 CDS YP_004295841.1 325983439 10299435 2877044..2880310 1 NC_015222.1 PFAM: Protein of unknown function DUF748; KEGG: nmu:Nmul_A2679 hypothetical protein; hypothetical protein 2880310 10299435 NAL212_2894 Nitrosomonas sp. AL212 hypothetical protein YP_004295841.1 2877044 D 153948 CDS YP_004295842.1 325983440 10299436 complement(2880451..2880909) 1 NC_015222.1 KEGG: neu:NE1746 fimbrial protein pilin; fimbrial protein pilin 2880909 10299436 NAL212_2895 Nitrosomonas sp. AL212 fimbrial protein pilin YP_004295842.1 2880451 R 153948 CDS YP_004295843.1 325983441 10299437 complement(2881078..2884608) 1 NC_015222.1 PFAM: PilC domain; KEGG: net:Neut_1833 putative type 4 fimbrial biogenesis protein PilY1; PilC domain-containing protein 2884608 10299437 NAL212_2896 Nitrosomonas sp. AL212 PilC domain-containing protein YP_004295843.1 2881078 R 153948 CDS YP_004295844.1 325983442 10299438 complement(2884639..2885208) 1 NC_015222.1 KEGG: neu:NE1748 hypothetical protein; hypothetical protein 2885208 10299438 NAL212_2897 Nitrosomonas sp. AL212 hypothetical protein YP_004295844.1 2884639 R 153948 CDS YP_004295845.1 325983443 10299439 complement(2885205..2886002) 1 NC_015222.1 KEGG: reu:Reut_A0785 putative Tfp pilus assembly protein PilW; putative Tfp pilus assembly protein PilW 2886002 10299439 NAL212_2898 Nitrosomonas sp. AL212 putative Tfp pilus assembly protein PilW YP_004295845.1 2885205 R 153948 CDS YP_004295846.1 325983444 10299440 complement(2886002..2886517) 1 NC_015222.1 TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG: noc:Noc_2271 type IV fimbrial biogenesis protein PilV; type IV pilus modification protein PilV 2886517 10299440 NAL212_2899 Nitrosomonas sp. AL212 type IV pilus modification protein PilV YP_004295846.1 2886002 R 153948 CDS YP_004295847.1 325983445 10299441 complement(2886508..2887086) 1 NC_015222.1 PFAM: General secretion pathway, GspH; Prepilin-type cleavage/methylation, N-terminal; KEGG: neu:NE1751 putative type-4 fimbrial pilin related signal peptide protein; General secretion pathway, GspH 2887086 10299441 NAL212_2900 Nitrosomonas sp. AL212 General secretion pathway, GspH YP_004295847.1 2886508 R 153948 CDS YP_004295848.1 325983446 10299442 2887278..2888384 1 NC_015222.1 TIGRFAM: Glycine oxidase ThiO; KEGG: neu:NE0650 NAD binding site:D-amino acid oxidase; PFAM: FAD dependent oxidoreductase; glycine oxidase ThiO 2888384 10299442 NAL212_2901 Nitrosomonas sp. AL212 glycine oxidase ThiO YP_004295848.1 2887278 D 153948 CDS YP_004295849.1 325983447 10299443 complement(2888394..2889338) 1 NC_015222.1 TIGRFAM: LytB protein; KEGG: net:Neut_1903 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase 2889338 10299443 NAL212_2902 Nitrosomonas sp. AL212 hydroxymethylbutenyl pyrophosphate reductase YP_004295849.1 2888394 R 153948 CDS YP_004295850.1 325983448 10299444 complement(2889441..2890559) 1 NC_015222.1 KEGG: nmu:Nmul_A0091 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; 3-deoxy-7-phosphoheptulonate synthase 2890559 10299444 NAL212_2903 Nitrosomonas sp. AL212 3-deoxy-7-phosphoheptulonate synthase YP_004295850.1 2889441 R 153948 CDS YP_004295851.1 325983449 10299445 2890819..2892087 1 NC_015222.1 KEGG: nmu:Nmul_A0008 periplasmic sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; integral membrane sensor signal transduction histidine kinase 2892087 10299445 NAL212_2904 Nitrosomonas sp. AL212 integral membrane sensor signal transduction histidine kinase YP_004295851.1 2890819 D 153948 CDS YP_004295852.1 325983450 10299446 2892084..2892647 1 NC_015222.1 KEGG: net:Neut_1251 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; Fis family two component transcriptional regulator 2892647 10299446 NAL212_2905 Nitrosomonas sp. AL212 Fis family two component transcriptional regulator YP_004295852.1 2892084 D 153948 CDS YP_004295853.1 325983451 10299447 complement(2892661..2893761) 1 NC_015222.1 TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: nmu:Nmul_A0006 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding; riboflavin biosynthesis protein RibD 2893761 10299447 NAL212_2906 Nitrosomonas sp. AL212 riboflavin biosynthesis protein RibD YP_004295853.1 2892661 R 153948 CDS YP_004295854.1 325983452 10299448 complement(2893872..2894318) 1 NC_015222.1 KEGG: nmu:Nmul_A0005 transcriptional regulator NrdR; TIGRFAM: Ribonucleotide reductase regulator NrdR-like; PFAM: ATP-cone; ribonucleotide reductase regulator NrdR-like protein 2894318 10299448 NAL212_2907 Nitrosomonas sp. AL212 ribonucleotide reductase regulator NrdR-like protein YP_004295854.1 2893872 R 153948 CDS YP_004295855.1 325983453 10299449 complement(2894385..2895632) 1 NC_015222.1 KEGG: nmu:Nmul_A0004 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; glycine hydroxymethyltransferase 2895632 10299449 NAL212_2908 Nitrosomonas sp. AL212 glycine hydroxymethyltransferase YP_004295855.1 2894385 R 153948 CDS YP_004295856.1 325983454 10299450 complement(2895836..2896537) 1 NC_015222.1 PFAM: Glutamine amidotransferase class-I, C-terminal; KEGG: nmu:Nmul_A1045 glutamine amidotransferase class-I; glutamine amidotransferase 2896537 10299450 NAL212_2909 Nitrosomonas sp. AL212 glutamine amidotransferase YP_004295856.1 2895836 R 153948 CDS YP_004295857.1 325983455 10299451 2896704..2898086 1 NC_015222.1 PFAM: Protein of unknown function DUF2868; KEGG: net:Neut_1033 hypothetical protein; hypothetical protein 2898086 10299451 NAL212_2910 Nitrosomonas sp. AL212 hypothetical protein YP_004295857.1 2896704 D 153948 CDS YP_004295858.1 325983456 10299452 2898090..2899496 1 NC_015222.1 PFAM: Protein of unknown function DUF3482; GTP-binding protein, HSR1-related; KEGG: net:Neut_1034 GTP-binding protein, HSR1-related; hypothetical protein 2899496 10299452 NAL212_2911 Nitrosomonas sp. AL212 hypothetical protein YP_004295858.1 2898090 D 153948 CDS YP_004295859.1 325983457 10299453 complement(2899792..2899926) 1 NC_015222.1 hypothetical protein 2899926 10299453 NAL212_2912 Nitrosomonas sp. AL212 hypothetical protein YP_004295859.1 2899792 R 153948 CDS YP_004295860.1 325983458 10299454 2900160..2900552 1 NC_015222.1 KEGG: lcr:LCRIS_00177 S-layer protein; hypothetical protein 2900552 10299454 NAL212_2913 Nitrosomonas sp. AL212 hypothetical protein YP_004295860.1 2900160 D 153948 CDS YP_004295861.1 325983459 10299455 2901240..2901923 1 NC_015222.1 PFAM: Peptidase, membrane zinc metallopeptidase, putative; KEGG: aeh:Mlg_1818 peptidase, membrane zinc metallopeptidase, putative; peptidase membrane zinc metallopeptidase 2901923 10299455 NAL212_2914 Nitrosomonas sp. AL212 peptidase membrane zinc metallopeptidase YP_004295861.1 2901240 D 153948 CDS YP_004295862.1 325983460 10299456 2902063..2902497 1 NC_015222.1 KEGG: neu:NE1611 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal; general secretion pathway protein G 2902497 10299456 NAL212_2915 Nitrosomonas sp. AL212 general secretion pathway protein G YP_004295862.1 2902063 D 153948 CDS YP_004295863.1 325983461 10299457 2902506..2903690 1 NC_015222.1 PFAM: Type II secretion system F domain; KEGG: nmu:Nmul_A2589 type II secretion system protein; Type II secretion system F domain 2903690 10299457 NAL212_2916 Nitrosomonas sp. AL212 Type II secretion system F domain YP_004295863.1 2902506 D 153948 CDS YP_004295864.1 325983462 10299458 2903690..2905378 1 NC_015222.1 PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: net:Neut_0508 type II secretion system protein E; type II secretion system protein E 2905378 10299458 NAL212_2917 Nitrosomonas sp. AL212 type II secretion system protein E YP_004295864.1 2903690 D 153948 CDS YP_004295865.1 325983463 10299459 2905359..2906192 1 NC_015222.1 KEGG: nmu:Nmul_A2587 hypothetical protein; hypothetical protein 2906192 10299459 NAL212_2918 Nitrosomonas sp. AL212 hypothetical protein YP_004295865.1 2905359 D 153948 CDS YP_004295866.1 325983464 10299460 2906180..2906728 1 NC_015222.1 KEGG: net:Neut_0510 fimbrial assembly family protein; fimbrial assembly family protein 2906728 10299460 NAL212_2919 Nitrosomonas sp. AL212 fimbrial assembly family protein YP_004295866.1 2906180 D 153948 CDS YP_004295867.1 325983465 10299461 2906764..2907315 1 NC_015222.1 KEGG: nmu:Nmul_A2585 transmembrane protein; transmembrane protein 2907315 10299461 NAL212_2920 Nitrosomonas sp. AL212 transmembrane protein YP_004295867.1 2906764 D 153948 CDS YP_004295868.1 325983466 10299462 2907320..2907886 1 NC_015222.1 KEGG: net:Neut_0512 putative prolin-rich transmembrane protein; putative prolin-rich transmembrane protein 2907886 10299462 NAL212_2921 Nitrosomonas sp. AL212 putative prolin-rich transmembrane protein YP_004295868.1 2907320 D 153948 CDS YP_004295869.1 325983467 10299463 2907886..2910156 1 NC_015222.1 KEGG: net:Neut_0513 type II and III secretion system protein; PFAM: Type II/III secretion system; Secretin/TonB, short N-terminal; SMART: Secretin/TonB, short N-terminal; type II and III secretion system protein 2910156 10299463 NAL212_2922 Nitrosomonas sp. AL212 type II and III secretion system protein YP_004295869.1 2907886 D 153948 CDS YP_004295870.1 325983468 10299464 2910162..2910674 1 NC_015222.1 KEGG: neu:NE1603 putative general secretion pathway GspG related transmembrane protein; putative general secretion pathway GspG related transmembrane protein 2910674 10299464 NAL212_2923 Nitrosomonas sp. AL212 putative general secretion pathway GspG related transmembrane protein YP_004295870.1 2910162 D 153948 CDS YP_004295871.1 325983469 10299465 2910668..2911066 1 NC_015222.1 PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal; KEGG: nmu:Nmul_A2581 N-terminal methylation site; type II secretion system protein G 2911066 10299465 NAL212_2924 Nitrosomonas sp. AL212 type II secretion system protein G YP_004295871.1 2910668 D 153948 CDS YP_004295872.1 325983470 10299466 2911103..2912011 1 NC_015222.1 KEGG: net:Neut_0516 putative transmembrane protein; hypothetical protein 2912011 10299466 NAL212_2925 Nitrosomonas sp. AL212 hypothetical protein YP_004295872.1 2911103 D 153948 CDS YP_004295873.1 325983471 10299467 complement(2912105..2912497) 1 NC_015222.1 PFAM: Endoribonuclease L-PSP; KEGG: net:Neut_1514 endoribonuclease L-PSP; endoribonuclease L-PSP 2912497 10299467 NAL212_2926 Nitrosomonas sp. AL212 endoribonuclease L-PSP YP_004295873.1 2912105 R 153948 CDS YP_004295874.1 325983472 10299468 2912612..2914048 1 NC_015222.1 KEGG: net:Neut_1887 exonuclease I; PFAM: Exonuclease C-terminal; Exonuclease, RNase T/DNA polymerase III; exodeoxyribonuclease I 2914048 10299468 NAL212_2927 Nitrosomonas sp. AL212 exodeoxyribonuclease I YP_004295874.1 2912612 D 153948 CDS YP_004295875.1 325983473 10299469 2914379..2915422 1 NC_015222.1 TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: neu:NE0965 twitching mobility protein; SMART: ATPase, AAA+ type, core; twitching motility protein 2915422 10299469 NAL212_2928 Nitrosomonas sp. AL212 twitching motility protein YP_004295875.1 2914379 D 153948 CDS YP_004295876.1 325983474 10299470 2915463..2916599 1 NC_015222.1 TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: net:Neut_2337 twitching motility protein; SMART: ATPase, AAA+ type, core; twitching motility protein 2916599 10299470 NAL212_2929 Nitrosomonas sp. AL212 twitching motility protein YP_004295876.1 2915463 D 153948 CDS YP_004295877.1 325983475 10299471 complement(2916870..2917427) 1 NC_015222.1 KEGG: ddi:DDB_G0292664 hypothetical protein; hypothetical protein 2917427 10299471 NAL212_2930 Nitrosomonas sp. AL212 hypothetical protein YP_004295877.1 2916870 R 153948 CDS YP_004295878.1 325983476 10299472 complement(2917471..2917599) 1 NC_015222.1 hypothetical protein 2917599 10299472 NAL212_2931 Nitrosomonas sp. AL212 hypothetical protein YP_004295878.1 2917471 R 153948 CDS YP_004295879.1 325983477 10299473 complement(2917596..2920193) 1 NC_015222.1 TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Phosphoesterase, DHHA1; Threonyl/alanyl tRNA synthetase, SAD; KEGG: nmu:Nmul_A0022 alanyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase, SAD; alanyl-tRNA synthetase 2920193 10299473 NAL212_2932 Nitrosomonas sp. AL212 alanyl-tRNA synthetase YP_004295879.1 2917596 R 153948 CDS YP_004295880.1 325983478 10299474 complement(2920190..2920555) 1 NC_015222.1 KEGG: nmu:Nmul_A0021 hypothetical protein; hypothetical protein 2920555 10299474 NAL212_2933 Nitrosomonas sp. AL212 hypothetical protein YP_004295880.1 2920190 R 153948 CDS YP_004295881.1 325983479 10299475 complement(2920552..2921010) 1 NC_015222.1 KEGG: neu:NE1931 RecX regulatory protein; HAMAP: Regulatory protein RecX; PFAM: Regulatory protein RecX; Regulatory protein recX 2921010 10299475 NAL212_2934 Nitrosomonas sp. AL212 Regulatory protein recX YP_004295881.1 2920552 R 153948 CDS YP_004295882.1 325983480 10299476 complement(2921016..2922050) 1 NC_015222.1 TIGRFAM: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA; KEGG: neu:NE1932 recombinase A; SMART: ATPase, AAA+ type, core; recA protein 2922050 10299476 NAL212_2935 Nitrosomonas sp. AL212 recA protein YP_004295882.1 2921016 R 153948 CDS YP_004295883.1 325983481 10299477 2922284..2922925 1 NC_015222.1 TIGRFAM: Adenylate kinase, subfamily; HAMAP: Adenylate kinase; KEGG: nmu:Nmul_A0741 adenylate kinase; PFAM: Adenylate kinase; Adenylate kinase, active site lid domain; adenylate kinase 2922925 10299477 NAL212_2936 Nitrosomonas sp. AL212 adenylate kinase YP_004295883.1 2922284 D 153948 CDS YP_004295884.1 325983482 10299478 2923059..2924318 1 NC_015222.1 PFAM: Phosphofructokinase domain; KEGG: neu:NE1934 6-phosphofructokinase; phosphofructokinase 2924318 10299478 NAL212_2937 Nitrosomonas sp. AL212 phosphofructokinase YP_004295884.1 2923059 D 153948 CDS YP_004295885.1 325983483 10299479 2924706..2926763 1 NC_015222.1 TIGRFAM: Pyrophosphate-energised proton pump; KEGG: neu:NE1935 membrane-bound proton-translocating pyrophosphatase; PFAM: Pyrophosphate-energised proton pump; V-type H(+)-translocating pyrophosphatase 2926763 10299479 NAL212_2938 Nitrosomonas sp. AL212 V-type H(+)-translocating pyrophosphatase YP_004295885.1 2924706 D 153948 CDS YP_004295886.1 325983484 10299480 complement(2926942..2927769) 1 NC_015222.1 PFAM: Protein of unknown function DUF299, phosphotransferase, predicted; KEGG: neu:NE2365 hypothetical protein; hypothetical protein 2927769 10299480 NAL212_2939 Nitrosomonas sp. AL212 hypothetical protein YP_004295886.1 2926942 R 153948 CDS YP_004295887.1 325983485 10299481 complement(2927766..2930147) 1 NC_015222.1 TIGRFAM: Phosphoenolpyruvate synthase; KEGG: neu:NE2366 phosphoenolpyruvate synthase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme; PEP-utilising enzyme, mobile domain; phosphoenolpyruvate synthase 2930147 10299481 NAL212_2940 Nitrosomonas sp. AL212 phosphoenolpyruvate synthase YP_004295887.1 2927766 R 153948 CDS YP_004295888.1 325983486 10299482 complement(2930197..2931183) 1 NC_015222.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: slt:Slit_0984 transcriptional regulator, LysR family; LysR family transcriptional regulator 2931183 10299482 NAL212_2941 Nitrosomonas sp. AL212 LysR family transcriptional regulator YP_004295888.1 2930197 R 153948 CDS YP_004295889.1 325983487 10299483 2931352..2932827 1 NC_015222.1 KEGG: nwa:Nwat_2772 ribulose-bisphosphate carboxylase; PFAM: Ribulose bisphosphate carboxylase, large subunit, C-terminal; Ribulose bisphosphate carboxylase, large subunit, N-terminal; ribulose-bisphosphate carboxylase 2932827 10299483 NAL212_2942 Nitrosomonas sp. AL212 ribulose-bisphosphate carboxylase YP_004295889.1 2931352 D 153948 CDS YP_004295890.1 325983488 10299484 2932848..2933282 1 NC_015222.1 PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: nmu:Nmul_A0685 ribulose-bisphosphate carboxylase; SMART: Ribulose bisphosphate carboxylase, small chain; ribulose-bisphosphate carboxylase 2933282 10299484 NAL212_2943 Nitrosomonas sp. AL212 ribulose-bisphosphate carboxylase YP_004295890.1 2932848 D 153948 CDS YP_004295891.1 325983489 10299485 2933430..2934371 1 NC_015222.1 TIGRFAM: CbxX/CfqX, monofunctional; PFAM: ATPase, AAA-type, core; KEGG: nmu:Nmul_A0684 AAA ATPase, central region; SMART: ATPase, AAA+ type, core; CbbX protein 2934371 10299485 NAL212_2944 Nitrosomonas sp. AL212 CbbX protein YP_004295891.1 2933430 D 153948 CDS YP_004295892.1 325983490 10299486 2934406..2934759 1 NC_015222.1 KEGG: nhl:Nhal_3445 hypothetical protein; hypothetical protein 2934759 10299486 NAL212_2945 Nitrosomonas sp. AL212 hypothetical protein YP_004295892.1 2934406 D 153948 CDS YP_004295893.1 325983491 10299487 2934793..2936025 1 NC_015222.1 TIGRFAM: Ketose-bisphosphate aldolase, class-II; KEGG: slt:Slit_0992 ketose-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II; ketose-bisphosphate aldolase 2936025 10299487 NAL212_2946 Nitrosomonas sp. AL212 ketose-bisphosphate aldolase YP_004295893.1 2934793 D 153948 CDS YP_004295894.1 325983492 10299488 2936249..2936932 1 NC_015222.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: net:Neut_2403 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 2936932 10299488 NAL212_2947 Nitrosomonas sp. AL212 OmpA/MotB domain-containing protein YP_004295894.1 2936249 D 153948 CDS YP_004295895.1 325983493 10299489 complement(2937022..2937249) 1 NC_015222.1 KEGG: nmg:Nmag_1146 alcohol dehydrogenase GroES domain protein; hypothetical protein 2937249 10299489 NAL212_2948 Nitrosomonas sp. AL212 hypothetical protein YP_004295895.1 2937022 R 153948 CDS YP_004295896.1 325983494 10299490 complement(2939010..2939315) 1 NC_015222.1 KEGG: vei:Veis_1232 CRISPR-associated Cas2 family protein; TIGRFAM: CRISPR associated protein Cas2; PFAM: Virulence-associated protein D / CRISPR associated protein Cas2; CRISPR-associated protein Cas2 2939315 10299490 NAL212_2949 Nitrosomonas sp. AL212 CRISPR-associated protein Cas2 YP_004295896.1 2939010 R 153948 CDS YP_004295897.1 325983495 10299492 2940133..2941440 1 NC_015222.1 PFAM: Transposase, IS4-like; KEGG: dde:Dde_2849 ISPg7, transposase; transposase IS4 family protein 2941440 10299492 NAL212_2951 Nitrosomonas sp. AL212 transposase IS4 family protein YP_004295897.1 2940133 D 153948 CDS YP_004295898.1 325983496 10299493 complement(2941806..2944940) 1 NC_015222.1 TIGRFAM: CRISPR-associated protein, SAG0894; KEGG: vei:Veis_1230 CRISPR-associated endonuclease Csn1 family protein; CRISPR-associated protein, Csn1 family 2944940 10299493 NAL212_2952 Nitrosomonas sp. AL212 CRISPR-associated protein, Csn1 family YP_004295898.1 2941806 R 153948 CDS YP_004295899.1 325983497 10299494 complement(2945202..2946608) 1 NC_015222.1 KEGG: bge:BC1002_4059 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; succinate-semialdehyde dehydrogenase 2946608 10299494 NAL212_2953 Nitrosomonas sp. AL212 succinate-semialdehyde dehydrogenase YP_004295899.1 2945202 R 153948 CDS YP_004295900.1 325983498 10299496 complement(2946891..2947790) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: pde:Pden_3846 integrase catalytic subunit; integrase catalytic region 2947790 10299496 NAL212_2955 Nitrosomonas sp. AL212 integrase catalytic region YP_004295900.1 2946891 R 153948 CDS YP_004295901.1 325983499 10299497 complement(2947850..2949004) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region; integrase catalytic region 2949004 10299497 NAL212_2956 Nitrosomonas sp. AL212 integrase catalytic region YP_004295901.1 2947850 R 153948 CDS YP_004295902.1 325983500 10299498 complement(2949036..2949344) 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: alv:Alvin_1732 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2949344 10299498 NAL212_2957 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004295902.1 2949036 R 153948 CDS YP_004295903.1 325983501 10299499 2949983..2950285 1 NC_015222.1 KEGG: ptm:GSPATT00021173001 hypothetical protein; hypothetical protein 2950285 10299499 NAL212_2958 Nitrosomonas sp. AL212 hypothetical protein YP_004295903.1 2949983 D 153948 CDS YP_004295904.1 325983502 10299500 complement(2950442..2951353) 1 NC_015222.1 KEGG: neu:NE2218 hypothetical protein; hypothetical protein 2951353 10299500 NAL212_2959 Nitrosomonas sp. AL212 hypothetical protein YP_004295904.1 2950442 R 153948 CDS YP_004295905.1 325983503 10299501 complement(2951716..2952618) 1 NC_015222.1 KEGG: syx:SynWH7803_0111 atypical alkaline phosphatase with phytase-like insertion; hypothetical protein 2952618 10299501 NAL212_2960 Nitrosomonas sp. AL212 hypothetical protein YP_004295905.1 2951716 R 153948 CDS YP_004295906.1 325983504 10299502 complement(2952747..2954567) 1 NC_015222.1 KEGG: nmu:Nmul_A1899 multicopper oxidase type 1; multicopper oxidase type 1 2954567 10299502 NAL212_2961 Nitrosomonas sp. AL212 multicopper oxidase type 1 YP_004295906.1 2952747 R 153948 CDS YP_004295907.1 325983505 10299503 complement(2954668..2954976) 1 NC_015222.1 KEGG: cai:Caci_8228 hypothetical protein; hypothetical protein 2954976 10299503 NAL212_2962 Nitrosomonas sp. AL212 hypothetical protein YP_004295907.1 2954668 R 153948 CDS YP_004295908.1 325983506 10299504 2955172..2956023 1 NC_015222.1 KEGG: rfr:Rfer_1747 hypothetical protein; hypothetical protein 2956023 10299504 NAL212_2963 Nitrosomonas sp. AL212 hypothetical protein YP_004295908.1 2955172 D 153948 CDS YP_004295909.1 325983507 10299505 2956075..2957823 1 NC_015222.1 KEGG: ppf:Pput_1226 hypothetical protein; hypothetical protein 2957823 10299505 NAL212_2964 Nitrosomonas sp. AL212 hypothetical protein YP_004295909.1 2956075 D 153948 CDS YP_004295910.1 325983508 10299506 2957973..2959199 1 NC_015222.1 KEGG: eba:ebA177 hypothetical protein; hypothetical protein 2959199 10299506 NAL212_2965 Nitrosomonas sp. AL212 hypothetical protein YP_004295910.1 2957973 D 153948 CDS YP_004295911.1 325983509 10299507 complement(2959254..2960219) 1 NC_015222.1 TIGRFAM: Putative agmatinase; KEGG: net:Neut_1437 agmatinase; PFAM: Ureohydrolase; agmatinase 2960219 10299507 NAL212_2966 Nitrosomonas sp. AL212 agmatinase YP_004295911.1 2959254 R 153948 CDS YP_004295912.1 325983510 10299508 2960445..2960948 1 NC_015222.1 KEGG: mca:MCA2972 lipoprotein A domain-containing protein; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Barwin-related endoglucanase; rare lipoprotein A 2960948 10299508 NAL212_2967 Nitrosomonas sp. AL212 rare lipoprotein A YP_004295912.1 2960445 D 153948 CDS YP_004295913.1 325983511 10299509 2961112..2961831 1 NC_015222.1 KEGG: neu:NE1296 cAMP-dependent protein kinase; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain; CarD family transcriptional regulator 2961831 10299509 NAL212_2968 Nitrosomonas sp. AL212 CarD family transcriptional regulator YP_004295913.1 2961112 D 153948 CDS YP_004295914.1 325983512 10299510 2961941..2963188 1 NC_015222.1 KEGG: nmu:Nmul_A2509 LolC/E family lipoprotein releasing system, transmembrane protein; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Domain of unknown function DUF214, ABC transporter permease; lipoprotein releasing system transmembrane protein LolC/E family 2963188 10299510 NAL212_2969 Nitrosomonas sp. AL212 lipoprotein releasing system transmembrane protein LolC/E family YP_004295914.1 2961941 D 153948 CDS YP_004295915.1 325983513 10299511 2963181..2963870 1 NC_015222.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Lipoprotein releasing system, ATP-binding protein; KEGG: nmu:Nmul_A2508 lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter-like; lipoprotein releasing system, ATP-binding protein 2963870 10299511 NAL212_2970 Nitrosomonas sp. AL212 lipoprotein releasing system, ATP-binding protein YP_004295915.1 2963181 D 153948 CDS YP_004295916.1 325983514 10299512 2963921..2965630 1 NC_015222.1 PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: neu:NE1613 ABC transporter permease/ATP-binding protein; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 2965630 10299512 NAL212_2971 Nitrosomonas sp. AL212 xenobiotic-transporting ATPase YP_004295916.1 2963921 D 153948 CDS YP_004295917.1 325983515 10299513 complement(2965659..2966009) 1 NC_015222.1 PFAM: Uncharacterised conserved protein UCP025560; KEGG: cte:CT1722 hypothetical protein; hypothetical protein 2966009 10299513 NAL212_2972 Nitrosomonas sp. AL212 hypothetical protein YP_004295917.1 2965659 R 153948 CDS YP_004295918.1 325983516 10299514 complement(2966034..2966249) 1 NC_015222.1 KEGG: cte:CT1723 hypothetical protein; hypothetical protein 2966249 10299514 NAL212_2973 Nitrosomonas sp. AL212 hypothetical protein YP_004295918.1 2966034 R 153948 CDS YP_004295919.1 325983517 10299515 complement(2966317..2968782) 1 NC_015222.1 PFAM: Dicarboxylate transport; KEGG: azl:AZL_014360 hypothetical protein; dienelactone hydrolase domain-containing protein 2968782 10299515 NAL212_2974 Nitrosomonas sp. AL212 dienelactone hydrolase domain-containing protein YP_004295919.1 2966317 R 153948 CDS YP_004295920.1 325983518 10299516 2969053..2969706 1 NC_015222.1 PFAM: Guanylate kinase; KEGG: wsu:WS0188 guanylate kinase; guanylate kinase 2969706 10299516 NAL212_2975 Nitrosomonas sp. AL212 guanylate kinase YP_004295920.1 2969053 D 153948 CDS YP_004295921.1 325983519 10299517 2970022..2970180 1 NC_015222.1 KEGG: nmu:Nmul_A0026 major facilitator transporter; hypothetical protein 2970180 10299517 NAL212_2976 Nitrosomonas sp. AL212 hypothetical protein YP_004295921.1 2970022 D 153948 CDS YP_004295922.1 325983520 10299518 2970400..2970939 1 NC_015222.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: gca:Galf_2042 peroxiredoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 2970939 10299518 NAL212_2977 Nitrosomonas sp. AL212 alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen YP_004295922.1 2970400 D 153948 CDS YP_004295923.1 325983521 10299519 2971041..2971412 1 NC_015222.1 KEGG: nmu:Nmul_A0025 TraR/DksA family transcriptional regulator; TraR/DksA family transcriptional regulator 2971412 10299519 NAL212_2978 Nitrosomonas sp. AL212 TraR/DksA family transcriptional regulator YP_004295923.1 2971041 D 153948 CDS YP_004295924.1 325983522 10299520 complement(2971433..2971960) 1 NC_015222.1 KEGG: nmu:Nmul_A0024 Smr protein/MutS2-like; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal; Smr protein/MutS2 2971960 10299520 NAL212_2979 Nitrosomonas sp. AL212 Smr protein/MutS2 YP_004295924.1 2971433 R 153948 CDS YP_004295925.1 325983523 10299521 complement(2972027..2973010) 1 NC_015222.1 TIGRFAM: Thioredoxin reductase; KEGG: nmu:Nmul_A0023 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 2973010 10299521 NAL212_2980 Nitrosomonas sp. AL212 thioredoxin reductase YP_004295925.1 2972027 R 153948 CDS YP_004295926.1 325983524 10299522 complement(2972982..2973641) 1 NC_015222.1 KEGG: cyc:PCC7424_2988 intradiol ring-cleavage dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; protocatechuate 3,4-dioxygenase 2973641 10299522 NAL212_2981 Nitrosomonas sp. AL212 protocatechuate 3,4-dioxygenase YP_004295926.1 2972982 R 153948 CDS YP_004295927.1 325983525 10299523 complement(2973974..2974615) 1 NC_015222.1 KEGG: app:CAP2UW1_2168 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif putative anchor domain-containing protein 2974615 10299523 NAL212_2982 Nitrosomonas sp. AL212 PEP motif putative anchor domain-containing protein YP_004295927.1 2973974 R 153948 CDS YP_004295928.1 325983526 10299524 2974891..2974995 1 NC_015222.1 hypothetical protein 2974995 10299524 NAL212_2983 Nitrosomonas sp. AL212 hypothetical protein YP_004295928.1 2974891 D 153948 CDS YP_004295929.1 325983527 10299525 complement(2975410..2975577) 1 NC_015222.1 KEGG: tye:THEYE_A0608 tetratricopeptide repeat domain protein; hypothetical protein 2975577 10299525 NAL212_2984 Nitrosomonas sp. AL212 hypothetical protein YP_004295929.1 2975410 R 153948 CDS YP_004295930.1 325983528 10299526 complement(2975833..2977095) 1 NC_015222.1 KEGG: nmu:Nmul_A0389 two component, sigma54 specific, fis family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; two component, sigma54 specific, transcriptional regulator, Fis family 2977095 10299526 NAL212_2985 Nitrosomonas sp. AL212 two component, sigma54 specific, transcriptional regulator, Fis family YP_004295930.1 2975833 R 153948 CDS YP_004295931.1 325983529 10299527 complement(2977248..2979425) 1 NC_015222.1 KEGG: net:Neut_0388 periplasmic sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; multi-sensor signal transduction histidine kinase 2979425 10299527 NAL212_2986 Nitrosomonas sp. AL212 multi-sensor signal transduction histidine kinase YP_004295931.1 2977248 R 153948 CDS YP_004295932.1 325983530 10299528 complement(2979425..2980075) 1 NC_015222.1 KEGG: nmu:Nmul_A0391 proline rich signal peptide protein; hypothetical protein 2980075 10299528 NAL212_2987 Nitrosomonas sp. AL212 hypothetical protein YP_004295932.1 2979425 R 153948 CDS YP_004295933.1 325983531 10299529 complement(2980038..2981315) 1 NC_015222.1 KEGG: nmu:Nmul_A0392 sun protein; TIGRFAM: Fmu, rRNA SAM-dependent methyltransferase; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44; sun protein 2981315 10299529 NAL212_2988 Nitrosomonas sp. AL212 sun protein YP_004295933.1 2980038 R 153948 CDS YP_004295934.1 325983532 10299530 complement(2981320..2982261) 1 NC_015222.1 TIGRFAM: Methionyl-tRNA formyltransferase; KEGG: nmu:Nmul_A0393 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; methionyl-tRNA formyltransferase 2982261 10299530 NAL212_2989 Nitrosomonas sp. AL212 methionyl-tRNA formyltransferase YP_004295934.1 2981320 R 153948 CDS YP_004295935.1 325983533 10299531 complement(2982375..2982878) 1 NC_015222.1 KEGG: nmu:Nmul_A0394 peptide deformylase; TIGRFAM: Formylmethionine deformylase; PFAM: Formylmethionine deformylase; peptide deformylase 2982878 10299531 NAL212_2990 Nitrosomonas sp. AL212 peptide deformylase YP_004295935.1 2982375 R 153948 CDS YP_004295936.1 325983534 10299532 2982975..2984009 1 NC_015222.1 KEGG: neu:NE1969 LysM motif-containing protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; peptidoglycan-binding lysin domain 2984009 10299532 NAL212_2991 Nitrosomonas sp. AL212 peptidoglycan-binding lysin domain YP_004295936.1 2982975 D 153948 CDS YP_004295937.1 325983535 10299533 2984029..2985126 1 NC_015222.1 KEGG: nmu:Nmul_A0395 DNA processing protein DprA, putative; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A; DNA protecting protein DprA 2985126 10299533 NAL212_2992 Nitrosomonas sp. AL212 DNA protecting protein DprA YP_004295937.1 2984029 D 153948 CDS YP_004295938.1 325983536 10299534 2985194..2985652 1 NC_015222.1 PFAM: Protein of unknown function DUF494; KEGG: net:Neut_0395 hypothetical protein; hypothetical protein 2985652 10299534 NAL212_2993 Nitrosomonas sp. AL212 hypothetical protein YP_004295938.1 2985194 D 153948 CDS YP_004295939.1 325983537 10299535 2985797..2988313 1 NC_015222.1 SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain; TIGRFAM: DNA topoisomerase III, bacterial-type; KEGG: nmu:Nmul_A0396 DNA topoisomerase III; PFAM: DNA topoisomerase, type IA, central; Toprim domain; DNA topoisomerase III 2988313 10299535 NAL212_2994 Nitrosomonas sp. AL212 DNA topoisomerase III YP_004295939.1 2985797 D 153948 CDS YP_004295940.1 325983538 10299536 complement(2988573..2988818) 1 NC_015222.1 KEGG: nmu:Nmul_A0399 hypothetical protein; hypothetical protein 2988818 10299536 NAL212_2995 Nitrosomonas sp. AL212 hypothetical protein YP_004295940.1 2988573 R 153948 CDS YP_004295941.1 325983539 10299537 2989125..2990447 1 NC_015222.1 TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; KEGG: net:Neut_0398 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: Enolpyruvate transferase domain; 3-phosphoshikimate 1-carboxyvinyltransferase 2990447 10299537 NAL212_2996 Nitrosomonas sp. AL212 3-phosphoshikimate 1-carboxyvinyltransferase YP_004295941.1 2989125 D 153948 CDS YP_004295942.1 325983540 10299538 2990486..2991166 1 NC_015222.1 KEGG: nmu:Nmul_A2070 cytidylate kinase; TIGRFAM: Cytidylate kinase; PFAM: Cytidylate kinase domain; cytidylate kinase 2991166 10299538 NAL212_2997 Nitrosomonas sp. AL212 cytidylate kinase YP_004295942.1 2990486 D 153948 CDS YP_004295943.1 325983541 10299539 2991298..2993010 1 NC_015222.1 TIGRFAM: Ribosomal S1 synthesis/modification protein; PFAM: Ribosomal protein S1, RNA-binding domain; KEGG: nmu:Nmul_A2069 30S ribosomal protein S1; SMART: RNA-binding domain, S1; 30S ribosomal protein S1 2993010 10299539 NAL212_2998 Nitrosomonas sp. AL212 30S ribosomal protein S1 YP_004295943.1 2991298 D 153948 CDS YP_004295944.1 325983542 10299540 2993020..2993310 1 NC_015222.1 TIGRFAM: Integration host factor, beta subunit; PFAM: Histone-like bacterial DNA-binding protein; KEGG: nmu:Nmul_A2068 integration host factor, beta subunit; SMART: Histone-like bacterial DNA-binding protein; integration host factor subunit beta 2993310 10299540 NAL212_2999 Nitrosomonas sp. AL212 integration host factor subunit beta YP_004295944.1 2993020 D 153948 CDS YP_004295945.1 325983543 10299541 2993494..2993703 1 NC_015222.1 PFAM: Protein of unknown function DUF1049; KEGG: rme:Rmet_0724 hypothetical protein; hypothetical protein 2993703 10299541 NAL212_3000 Nitrosomonas sp. AL212 hypothetical protein YP_004295945.1 2993494 D 153948 CDS YP_004295946.1 325983544 10299542 2993719..2994411 1 NC_015222.1 SMART: Orotidine 5'-phosphate decarboxylase domain; TIGRFAM: Orotidine 5'-phosphate decarboxylase; KEGG: nmu:Nmul_A2066 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase domain; orotidine 5'-phosphate decarboxylase 2994411 10299542 NAL212_3001 Nitrosomonas sp. AL212 orotidine 5'-phosphate decarboxylase YP_004295946.1 2993719 D 153948 CDS YP_004295947.1 325983545 10299543 complement(2994678..2997197) 1 NC_015222.1 KEGG: rru:Rru_B0037 hemolysin-type calcium-binding region; hypothetical protein 2997197 10299543 NAL212_3002 Nitrosomonas sp. AL212 hypothetical protein YP_004295947.1 2994678 R 153948 CDS YP_004295948.1 325983546 10299544 2997716..2997937 1 NC_015222.1 manually curated; KEGG: avn:Avin_15960 ABC-2 transporter, permease component; hypothetical protein 2997937 10299544 NAL212_3003 Nitrosomonas sp. AL212 hypothetical protein YP_004295948.1 2997716 D 153948 CDS YP_004295949.1 325983547 10299545 2997927..2999201 1 NC_015222.1 PFAM: ABC transporter-like; KEGG: mca:MCA2549 efflux ABC transporter, ATP-binding protein, putative; SMART: ATPase, AAA+ type, core; teichoic-acid-transporting AtPase 2999201 10299545 NAL212_3004 Nitrosomonas sp. AL212 teichoic-acid-transporting AtPase YP_004295949.1 2997927 D 153948 CDS YP_004295950.1 325983548 10299546 2999194..3000960 1 NC_015222.1 KEGG: mca:MCA2548 hypothetical protein; hypothetical protein 3000960 10299546 NAL212_3005 Nitrosomonas sp. AL212 hypothetical protein YP_004295950.1 2999194 D 153948 CDS YP_004295951.1 325983549 10299547 3001072..3002253 1 NC_015222.1 PFAM: Glycosyl transferase, group 1; KEGG: tit:Thit_0644 glycosyl transferase group 1; group 1 glycosyl transferase 3002253 10299547 NAL212_3006 Nitrosomonas sp. AL212 group 1 glycosyl transferase YP_004295951.1 3001072 D 153948 CDS YP_004295952.1 325983550 10299548 3002219..3002998 1 NC_015222.1 PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: swo:Swol_2445 hypothetical protein; LmbE family protein 3002998 10299548 NAL212_3007 Nitrosomonas sp. AL212 LmbE family protein YP_004295952.1 3002219 D 153948 CDS YP_004295953.1 325983551 10299549 3003172..3005166 1 NC_015222.1 PFAM: Haloacid dehalogenase-like hydrolase; KEGG: gpb:HDN1F_01080 hypothetical protein; haloacid dehalogenase domain-containing protein hydrolase 3005166 10299549 NAL212_3008 Nitrosomonas sp. AL212 haloacid dehalogenase domain-containing protein hydrolase YP_004295953.1 3003172 D 153948 CDS YP_004295954.1 325983552 10299551 complement(3005649..3007265) 1 NC_015222.1 KEGG: amr:AM1_6172 IS5 family transposase; IS5 family transposase 3007265 10299551 NAL212_3010 Nitrosomonas sp. AL212 IS5 family transposase YP_004295954.1 3005649 R 153948 CDS YP_004295955.1 325983553 10299552 complement(3010433..3011326) 1 NC_015222.1 PFAM: Ribosome biogenesis GTPase RsgA, putative; manually curated; TIGRFAM: Ribosome biogenesis GTPase RsgA, putative; KEGG: nmu:Nmul_A0711 GTPase EngC; HAMAP: Ribosome biogenesis GTPase RsgA, putative; ribosome biogenesis GTPase RsgA 3011326 10299552 NAL212_3011 Nitrosomonas sp. AL212 ribosome biogenesis GTPase RsgA YP_004295955.1 3010433 R 153948 CDS YP_004295956.1 325983554 10299553 complement(3011323..3011664) 1 NC_015222.1 PFAM: Transcriptional coactivator/pterin dehydratase; KEGG: nmu:Nmul_A0712 pterin-4-alpha-carbinolamine dehydratase; transcriptional coactivator/pterin dehydratase 3011664 10299553 NAL212_3012 Nitrosomonas sp. AL212 transcriptional coactivator/pterin dehydratase YP_004295956.1 3011323 R 153948 CDS YP_004295957.1 325983555 10299554 complement(3011661..3012917) 1 NC_015222.1 KEGG: neu:NE0076 M48 family peptidase; PFAM: Peptidase M48; Ste24 endopeptidase 3012917 10299554 NAL212_3013 Nitrosomonas sp. AL212 Ste24 endopeptidase YP_004295957.1 3011661 R 153948 CDS YP_004295958.1 325983556 10299555 3013010..3013555 1 NC_015222.1 KEGG: neu:NE0075 oligoribonuclease; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; exonuclease RNase T and DNA polymerase III 3013555 10299555 NAL212_3014 Nitrosomonas sp. AL212 exonuclease RNase T and DNA polymerase III YP_004295958.1 3013010 D 153948 CDS YP_004295959.1 325983557 10299556 3013672..3014085 1 NC_015222.1 KEGG: nmu:Nmul_A1009 calcium-binding EF-hand; calcium-binding EF-hand 3014085 10299556 NAL212_3015 Nitrosomonas sp. AL212 calcium-binding EF-hand YP_004295959.1 3013672 D 153948 CDS YP_004295960.1 325983558 10299557 complement(3014274..3015677) 1 NC_015222.1 KEGG: nmu:Nmul_A2737 peptidase M16-like; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; processing peptidase 3015677 10299557 NAL212_3016 Nitrosomonas sp. AL212 processing peptidase YP_004295960.1 3014274 R 153948 CDS YP_004295961.1 325983559 10299558 3015754..3016779 1 NC_015222.1 TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: net:Neut_1529 signal recognition particle-docking protein FtsY; SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core; signal recognition particle-docking protein FtsY 3016779 10299558 NAL212_3017 Nitrosomonas sp. AL212 signal recognition particle-docking protein FtsY YP_004295961.1 3015754 D 153948 CDS YP_004295962.1 325983560 10299559 3016807..3017460 1 NC_015222.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Cell division ATP-binding protein FtsE; KEGG: neu:NE1414 ABC transporter ATPase; PFAM: ABC transporter-like; cell division ATP-binding protein FtsE 3017460 10299559 NAL212_3018 Nitrosomonas sp. AL212 cell division ATP-binding protein FtsE YP_004295962.1 3016807 D 153948 CDS YP_004295963.1 325983561 10299560 3017457..3018368 1 NC_015222.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: net:Neut_1527 hypothetical protein; hypothetical protein 3018368 10299560 NAL212_3019 Nitrosomonas sp. AL212 hypothetical protein YP_004295963.1 3017457 D 153948 CDS YP_004295964.1 325983562 10299561 3018485..3019330 1 NC_015222.1 KEGG: nmu:Nmul_A2741 RNA polymerase factor sigma-32; TIGRFAM: RNA polymerase sigma factor RpoH, proteobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-32 subunit RpoH 3019330 10299561 NAL212_3020 Nitrosomonas sp. AL212 RNA polymerase sigma-32 subunit RpoH YP_004295964.1 3018485 D 153948 CDS YP_004295965.1 325983563 10299565 complement(3021400..3022554) 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region; integrase catalytic region 3022554 10299565 NAL212_3023 Nitrosomonas sp. AL212 integrase catalytic region YP_004295965.1 3021400 R 153948 CDS YP_004295966.1 325983564 10299566 complement(3022586..3022885) 1 NC_015222.1 PFAM: Transposase IS3/IS911family; KEGG: rms:RMA_0745 transposase; transposase IS3/IS911 family protein 3022885 10299566 NAL212_3024 Nitrosomonas sp. AL212 transposase IS3/IS911 family protein YP_004295966.1 3022586 R 153948 CDS YP_004295967.1 325983565 10299567 3022993..3023208 1 NC_015222.1 KEGG: tet:TTHERM_00266730 Viral A-type inclusion protein repeat containing protein; Viral A-type inclusion protein repeat containing protein 3023208 10299567 NAL212_3025 Nitrosomonas sp. AL212 Viral A-type inclusion protein repeat containing protein YP_004295967.1 3022993 D 153948 CDS YP_004295968.1 325983566 10299568 3023225..3023455 1 NC_015222.1 KEGG: tko:TK2070 cytosolic NiFe-hydrogenase, delta subunit; hypothetical protein 3023455 10299568 NAL212_3026 Nitrosomonas sp. AL212 hypothetical protein YP_004295968.1 3023225 D 153948 CDS YP_004295969.1 325983567 10299569 3023452..3023850 1 NC_015222.1 PFAM: Mor transcription activator; KEGG: dac:Daci_1325 hypothetical protein; Mor transcription activator domain-containing protein 3023850 10299569 NAL212_3027 Nitrosomonas sp. AL212 Mor transcription activator domain-containing protein YP_004295969.1 3023452 D 153948 CDS YP_004295970.1 325983568 10299570 complement(3023896..3024084) 1 NC_015222.1 hypothetical protein 3024084 10299570 NAL212_3028 Nitrosomonas sp. AL212 hypothetical protein YP_004295970.1 3023896 R 153948 CDS YP_004295971.1 325983569 10299571 3024772..3025032 1 NC_015222.1 KEGG: gvi:gsr0356 hypothetical protein; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Uncharacterised protein family UPF0156/MetJ /Arc repressor; addiction module antidote protein 3025032 10299571 NAL212_3029 Nitrosomonas sp. AL212 addiction module antidote protein YP_004295971.1 3024772 D 153948 CDS YP_004295972.1 325983570 10299572 3025032..3025352 1 NC_015222.1 PFAM: Plasmid stabilisation system; KEGG: gvi:glr0357 hypothetical protein; plasmid stabilization system 3025352 10299572 NAL212_3030 Nitrosomonas sp. AL212 plasmid stabilization system YP_004295972.1 3025032 D 153948 CDS YP_004295973.1 325983571 10299574 complement(3026449..3026601) 1 NC_015222.1 hypothetical protein 3026601 10299574 NAL212_3032 Nitrosomonas sp. AL212 hypothetical protein YP_004295973.1 3026449 R 153948 CDS YP_004295974.1 325983572 10299576 complement(3027190..3029070) 1 NC_015222.1 PFAM: IstB-like ATP-binding protein; Integrase, catalytic core; KEGG: mms:mma_2809 transposase IstA; IstB domain-containing protein ATP-binding protein 3029070 10299576 NAL212_3034 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004295974.1 3027190 R 153948 CDS YP_004295975.1 325983573 10299577 complement(3029189..3029503) 1 NC_015222.1 PFAM: Plasmid stabilisation system; KEGG: rec:RHECIAT_PC0000823 probable plasmid stabilization protein; plasmid stabilization system 3029503 10299577 NAL212_3035 Nitrosomonas sp. AL212 plasmid stabilization system YP_004295975.1 3029189 R 153948 CDS YP_004295976.1 325983574 10299578 complement(3029503..3029754) 1 NC_015222.1 PFAM: Antitoxin ParD; KEGG: rec:RHECIAT_PC0000824 probable plasmid stabilization protein; antitoxin ParD protein 3029754 10299578 NAL212_3036 Nitrosomonas sp. AL212 antitoxin ParD protein YP_004295976.1 3029503 R 153948 CDS YP_004295977.1 325983575 10299579 3030318..3031202 1 NC_015222.1 KEGG: pyo:PY05266 hypothetical protein; hypothetical protein 3031202 10299579 NAL212_3037 Nitrosomonas sp. AL212 hypothetical protein YP_004295977.1 3030318 D 153948 CDS YP_004295978.1 325983576 10299581 3033114..3034268 1 NC_015222.1 PFAM: Integrase, catalytic core; KEGG: bac:BamMC406_6587 integrase catalytic region; integrase catalytic region 3034268 10299581 NAL212_3039 Nitrosomonas sp. AL212 integrase catalytic region YP_004295978.1 3033114 D 153948 CDS YP_004295979.1 325983577 10299583 complement(3034575..3034883) 1 NC_015222.1 KEGG: dde:Dde_3407 ISGsu6, transposase OrfA; ISGsu6, transposase OrfA 3034883 10299583 NAL212_3041 Nitrosomonas sp. AL212 ISGsu6, transposase OrfA YP_004295979.1 3034575 R 153948 CDS YP_004295980.1 325983578 10299588 3037578..3037826 1 NC_015222.1 PFAM: CopG-like DNA-binding; KEGG: nhl:Nhal_0318 CopG domain protein DNA-binding domain protein; CopG-like DNA-binding domain-containing protein 3037826 10299588 NAL212_3046 Nitrosomonas sp. AL212 CopG-like DNA-binding domain-containing protein YP_004295980.1 3037578 D 153948 CDS YP_004295981.1 325983579 10299589 3037823..3038119 1 NC_015222.1 KEGG: nhl:Nhal_0317 addiction module toxin, RelE/StbE family; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system; RelE/StbE family addiction module toxin 3038119 10299589 NAL212_3047 Nitrosomonas sp. AL212 RelE/StbE family addiction module toxin YP_004295981.1 3037823 D 153948 CDS YP_004295982.1 325983580 10299591 complement(3038704..3040080) 1 NC_015222.1 KEGG: tmz:Tmz1t_3172 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 3040080 10299591 NAL212_3049 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004295982.1 3038704 R 153948 CDS YP_004295983.1 325983581 10299592 3040136..3040771 1 NC_015222.1 PFAM: Transposase (putative), IS66 Orf2-like; KEGG: eba:ebB55 transposase, fragment; IS66 Orf2 family protein 3040771 10299592 NAL212_3050 Nitrosomonas sp. AL212 IS66 Orf2 family protein YP_004295983.1 3040136 D 153948 CDS YP_004295984.1 325983582 10299593 3040825..3042408 1 NC_015222.1 PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase; transposase IS66 3042408 10299593 NAL212_3051 Nitrosomonas sp. AL212 transposase IS66 YP_004295984.1 3040825 D 153948 CDS YP_004295985.1 325983583 10299594 3042421..3043788 1 NC_015222.1 KEGG: tmz:Tmz1t_3172 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 3043788 10299594 NAL212_3052 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004295985.1 3042421 D 153948 CDS YP_004295986.1 325983584 10299596 complement(3044373..3044669) 1 NC_015222.1 KEGG: nhl:Nhal_0317 addiction module toxin, RelE/StbE family; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system; RelE/StbE family addiction module toxin 3044669 10299596 NAL212_3054 Nitrosomonas sp. AL212 RelE/StbE family addiction module toxin YP_004295986.1 3044373 R 153948 CDS YP_004295987.1 325983585 10299597 complement(3044666..3044914) 1 NC_015222.1 PFAM: CopG-like DNA-binding; KEGG: nhl:Nhal_0318 CopG domain protein DNA-binding domain protein; CopG-like DNA-binding domain-containing protein 3044914 10299597 NAL212_3055 Nitrosomonas sp. AL212 CopG-like DNA-binding domain-containing protein YP_004295987.1 3044666 R 153948 CDS YP_004295988.1 325983586 10299600 3046557..3046985 1 NC_015222.1 KEGG: lpc:LPC_2791 conjugal transfer protein TraM; hypothetical protein 3046985 10299600 NAL212_3058 Nitrosomonas sp. AL212 hypothetical protein YP_004295988.1 3046557 D 153948 CDS YP_004295989.1 325983587 10299602 3047223..3048260 1 NC_015222.1 PFAM: Integrase, catalytic core, phage; KEGG: afr:AFE_0995 site-specific recombinase, phage integrase family; integrase family protein 3048260 10299602 NAL212_3060 Nitrosomonas sp. AL212 integrase family protein YP_004295989.1 3047223 D 153948 CDS YP_004295990.1 325983588 10299603 3048483..3049787 1 NC_015222.1 PFAM: Integrase, catalytic core, phage; KEGG: tin:Tint_1145 integrase family protein; integrase family protein 3049787 10299603 NAL212_3061 Nitrosomonas sp. AL212 integrase family protein YP_004295990.1 3048483 D 153948 CDS YP_004295991.1 325983589 10299604 3049873..3050184 1 NC_015222.1 KEGG: afm:AFUA_8G02350 PKS-like enzyme; hypothetical protein 3050184 10299604 NAL212_3062 Nitrosomonas sp. AL212 hypothetical protein YP_004295991.1 3049873 D 153948 CDS YP_004295992.1 325983590 10299605 3050280..3051047 1 NC_015222.1 KEGG: eba:ebA798 hypothetical protein; hypothetical protein 3051047 10299605 NAL212_3063 Nitrosomonas sp. AL212 hypothetical protein YP_004295992.1 3050280 D 153948 CDS YP_004295993.1 325983591 10299606 3051144..3051383 1 NC_015222.1 KEGG: vap:Vapar_3801 hypothetical protein; hypothetical protein 3051383 10299606 NAL212_3064 Nitrosomonas sp. AL212 hypothetical protein YP_004295993.1 3051144 D 153948 CDS YP_004295994.1 325983592 10299607 3051386..3051958 1 NC_015222.1 KEGG: ahe:Arch_1299 LPXTG-motif cell wall anchor domain protein; hypothetical protein 3051958 10299607 NAL212_3065 Nitrosomonas sp. AL212 hypothetical protein YP_004295994.1 3051386 D 153948 CDS YP_004295995.1 325983593 10299608 3052010..3052390 1 NC_015222.1 KEGG: ols:Olsu_0575 potassium transporter; hypothetical protein 3052390 10299608 NAL212_3066 Nitrosomonas sp. AL212 hypothetical protein YP_004295995.1 3052010 D 153948 CDS YP_004295996.1 325983594 10299609 3052380..3053864 1 NC_015222.1 PFAM: Protein of unknown function DUF3631; KEGG: rso:RSc2483 hypothetical protein; hypothetical protein 3053864 10299609 NAL212_3067 Nitrosomonas sp. AL212 hypothetical protein YP_004295996.1 3052380 D 153948 CDS YP_004295997.1 325983595 10299610 3053866..3054144 1 NC_015222.1 KEGG: cbr:CBG11014 C. briggsae CBR-SUR-5 protein; hypothetical protein 3054144 10299610 NAL212_3068 Nitrosomonas sp. AL212 hypothetical protein YP_004295997.1 3053866 D 153948 CDS YP_004295998.1 325983596 10299611 3054161..3054526 1 NC_015222.1 KEGG: rxy:Rxyl_1916 hypothetical protein; hypothetical protein 3054526 10299611 NAL212_3069 Nitrosomonas sp. AL212 hypothetical protein YP_004295998.1 3054161 D 153948 CDS YP_004295999.1 325983597 10299612 3054653..3054877 1 NC_015222.1 KEGG: bpb:bpr_I1143 hypothetical protein; hypothetical protein 3054877 10299612 NAL212_3070 Nitrosomonas sp. AL212 hypothetical protein YP_004295999.1 3054653 D 153948 CDS YP_004296000.1 325983598 10299613 3055042..3055572 1 NC_015222.1 KEGG: tnp:Tnap_0277 PhoH family protein; hypothetical protein 3055572 10299613 NAL212_3071 Nitrosomonas sp. AL212 hypothetical protein YP_004296000.1 3055042 D 153948 CDS YP_004296001.1 325983599 10299614 3055686..3055874 1 NC_015222.1 hypothetical protein 3055874 10299614 NAL212_3072 Nitrosomonas sp. AL212 hypothetical protein YP_004296001.1 3055686 D 153948 CDS YP_004296002.1 325983600 10299615 3056242..3056499 1 NC_015222.1 KEGG: vdi:Vdis_0664 hypothetical protein; hypothetical protein 3056499 10299615 NAL212_3073 Nitrosomonas sp. AL212 hypothetical protein YP_004296002.1 3056242 D 153948 CDS YP_004296003.1 325983601 10299616 3056504..3057001 1 NC_015222.1 PFAM: Peptidase A2A, retrovirus RVP subgroup; KEGG: tan:TA11510 DNA-damage inducible protein ddi1-like; peptidase A2A 3057001 10299616 NAL212_3074 Nitrosomonas sp. AL212 peptidase A2A YP_004296003.1 3056504 D 153948 CDS YP_004296004.1 325983602 10299618 complement(3057229..3059451) 1 NC_015222.1 KEGG: nmu:Nmul_A2057 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, non-essential domain; RNA polymerase sigma factor 70, region 1.1; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 subunit RpoD 3059451 10299618 NAL212_3075 Nitrosomonas sp. AL212 RNA polymerase sigma-70 subunit RpoD YP_004296004.1 3057229 R 153948 CDS YP_004296005.1 325983603 10299619 complement(3059540..3061339) 1 NC_015222.1 KEGG: nmu:Nmul_A2058 DNA primase; TIGRFAM: DNA primase, DnaG; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; DNA primase, DnaB-helicase binding domain; DNA primase DnaG, DnaB-binding; DNA primase 3061339 10299619 NAL212_3076 Nitrosomonas sp. AL212 DNA primase YP_004296005.1 3059540 R 153948 CDS YP_004296006.1 325983604 10299620 complement(3061427..3061879) 1 NC_015222.1 KEGG: neu:NE0227 hypothetical protein; hypothetical protein 3061879 10299620 NAL212_3077 Nitrosomonas sp. AL212 hypothetical protein YP_004296006.1 3061427 R 153948 CDS YP_004296007.1 325983605 10299621 complement(3061982..3062194) 1 NC_015222.1 KEGG: nmu:Nmul_A2060 30S ribosomal protein S21; TIGRFAM: Ribosomal protein S21; PFAM: Ribosomal protein S21; 30S ribosomal protein S21 3062194 10299621 NAL212_3078 Nitrosomonas sp. AL212 30S ribosomal protein S21 YP_004296007.1 3061982 R 153948 CDS YP_004296008.1 325983606 10299622 complement(3062587..3063099) 1 NC_015222.1 KEGG: nmu:Nmul_A2414 hypothetical protein; HAMAP: Ribosome-associated, YjgA; PFAM: Ribosome-associated, YjgA; hypothetical protein 3063099 10299622 NAL212_3079 Nitrosomonas sp. AL212 hypothetical protein YP_004296008.1 3062587 R 153948 CDS YP_004296009.1 325983607 10299623 3063191..3064549 1 NC_015222.1 PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: nmu:Nmul_A2415 peptidase U62, modulator of DNA gyrase; peptidase U62 modulator of DNA gyrase 3064549 10299623 NAL212_3080 Nitrosomonas sp. AL212 peptidase U62 modulator of DNA gyrase YP_004296009.1 3063191 D 153948 CDS YP_004296010.1 325983608 10299624 complement(3064848..3065057) 1 NC_015222.1 hypothetical protein 3065057 10299624 NAL212_3081 Nitrosomonas sp. AL212 hypothetical protein YP_004296010.1 3064848 R 153948 CDS YP_004296011.1 325983609 10299625 complement(3065425..3066027) 1 NC_015222.1 KEGG: mei:Msip34_2442 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; PEP motif putative anchor domain-containing protein 3066027 10299625 NAL212_3082 Nitrosomonas sp. AL212 PEP motif putative anchor domain-containing protein YP_004296011.1 3065425 R 153948 CDS YP_004296012.1 325983610 10299631 complement(3069204..3069512) 1 NC_015222.1 KEGG: neu:NE0570 lipase; lipase 3069512 10299631 NAL212_3088 Nitrosomonas sp. AL212 lipase YP_004296012.1 3069204 R 153948 CDS YP_004296013.1 325983611 10299632 complement(3069645..3069953) 1 NC_015222.1 PFAM: Protein of unknown function DUF1840; KEGG: net:Neut_0486 hypothetical protein; hypothetical protein 3069953 10299632 NAL212_3089 Nitrosomonas sp. AL212 hypothetical protein YP_004296013.1 3069645 R 153948 CDS YP_004296014.1 325983612 10299633 complement(3070011..3070241) 1 NC_015222.1 KEGG: bth:BT_3853 hypothetical protein; hypothetical protein 3070241 10299633 NAL212_3090 Nitrosomonas sp. AL212 hypothetical protein YP_004296014.1 3070011 R 153948 CDS YP_004296015.1 325983613 10299634 3071100..3071636 1 NC_015222.1 PFAM: PEP-CTERM bacterial; KEGG: meh:M301_2481 protein of unknown function DUF1555; hypothetical protein 3071636 10299634 NAL212_3091 Nitrosomonas sp. AL212 hypothetical protein YP_004296015.1 3071100 D 153948 CDS YP_004296016.1 325983614 10299635 complement(3071920..3072849) 1 NC_015222.1 PFAM: Histone deacetylase superfamily; KEGG: slt:Slit_1540 histone deacetylase; histone deacetylase superfamily protein 3072849 10299635 NAL212_3092 Nitrosomonas sp. AL212 histone deacetylase superfamily protein YP_004296016.1 3071920 R 153948 CDS YP_004296017.1 325983615 10299636 3073023..3074069 1 NC_015222.1 KEGG: brm:Bmur_0150 apolipoprotein A1/A4/E; hypothetical protein 3074069 10299636 NAL212_3093 Nitrosomonas sp. AL212 hypothetical protein YP_004296017.1 3073023 D 153948 CDS YP_004296018.1 325983616 10299637 complement(3074066..3074293) 1 NC_015222.1 hypothetical protein 3074293 10299637 NAL212_3094 Nitrosomonas sp. AL212 hypothetical protein YP_004296018.1 3074066 R 153948 CDS YP_004296019.1 325983617 10299638 complement(3074310..3074777) 1 NC_015222.1 KEGG: swd:Swoo_3607 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein; bacterioferritin 3074777 10299638 NAL212_3095 Nitrosomonas sp. AL212 bacterioferritin YP_004296019.1 3074310 R 153948 CDS YP_004296020.1 325983618 10299639 complement(3075030..3076172) 1 NC_015222.1 PFAM: Filamentation induced by cAMP/death on curing-related; KEGG: cts:Ctha_0805 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 3076172 10299639 NAL212_3096 Nitrosomonas sp. AL212 filamentation induced by cAMP protein fic YP_004296020.1 3075030 R 153948 CDS YP_004296021.1 325983619 10299640 complement(3076307..3077515) 1 NC_015222.1 KEGG: pag:PLES_44951 hypothetical protein; hypothetical protein 3077515 10299640 NAL212_3097 Nitrosomonas sp. AL212 hypothetical protein YP_004296021.1 3076307 R 153948 CDS YP_004296022.1 325983620 10299641 complement(3077606..3078094) 1 NC_015222.1 KEGG: drt:Dret_2530 hypothetical protein; hypothetical protein 3078094 10299641 NAL212_3098 Nitrosomonas sp. AL212 hypothetical protein YP_004296022.1 3077606 R 153948 CDS YP_004296023.1 325983621 10299642 complement(3078194..3078895) 1 NC_015222.1 PFAM: Protein of unknown function DUF45; KEGG: nmu:Nmul_A0547 hypothetical protein; hypothetical protein 3078895 10299642 NAL212_3099 Nitrosomonas sp. AL212 hypothetical protein YP_004296023.1 3078194 R 153948 CDS YP_004296024.1 325983622 10299643 complement(3078898..3079629) 1 NC_015222.1 KEGG: net:Neut_1866 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 3079629 10299643 NAL212_3100 Nitrosomonas sp. AL212 phospholipid/glycerol acyltransferase YP_004296024.1 3078898 R 153948 CDS YP_004296025.1 325983623 10299644 complement(3079626..3080165) 1 NC_015222.1 KEGG: neu:NE1185 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; PFAM: Haloacid dehalogenase-like hydrolase; histidinol-phosphate phosphatase family protein 3080165 10299644 NAL212_3101 Nitrosomonas sp. AL212 histidinol-phosphate phosphatase family protein YP_004296025.1 3079626 R 153948 CDS YP_004296026.1 325983624 10299645 complement(3080167..3082362) 1 NC_015222.1 TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit; KEGG: mei:Msip34_2127 glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta 3082362 10299645 NAL212_3102 Nitrosomonas sp. AL212 glycyl-tRNA synthetase subunit beta YP_004296026.1 3080167 R 153948 CDS YP_004296027.1 325983625 10299646 complement(3082359..3083282) 1 NC_015222.1 TIGRFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; KEGG: neu:NE1187 glycyl-tRNA synthetase subunit alpha; PFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; glycyl-tRNA synthetase subunit alpha 3083282 10299646 NAL212_3103 Nitrosomonas sp. AL212 glycyl-tRNA synthetase subunit alpha YP_004296027.1 3082359 R 153948 CDS YP_004296028.1 325983626 10299647 complement(3083327..3084838) 1 NC_015222.1 TIGRFAM: Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; KEGG: nmu:Nmul_A0552 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 3084838 10299647 NAL212_3104 Nitrosomonas sp. AL212 apolipoprotein N-acyltransferase YP_004296028.1 3083327 R 153948 CDS YP_004296029.1 325983627 10299648 3085224..3086960 1 NC_015222.1 KEGG: nmu:Nmul_A0586 hypothetical protein; hypothetical protein 3086960 10299648 NAL212_3105 Nitrosomonas sp. AL212 hypothetical protein YP_004296029.1 3085224 D 153948 CDS YP_004296030.1 325983628 10299649 3087069..3087836 1 NC_015222.1 KEGG: neu:NE1831 putative cell division inhibitor MinC; TIGRFAM: Septum formation inhibitor MinC; PFAM: Septum formation inhibitor MinC, C-terminal; Septum formation inhibitor MinC, N-terminal; septum site-determining protein MinC 3087836 10299649 NAL212_3106 Nitrosomonas sp. AL212 septum site-determining protein MinC YP_004296030.1 3087069 D 153948 CDS YP_004296031.1 325983629 10299650 3087861..3088673 1 NC_015222.1 KEGG: net:Neut_1136 septum site-determining protein MinD; TIGRFAM: Septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; septum site-determining protein MinD 3088673 10299650 NAL212_3107 Nitrosomonas sp. AL212 septum site-determining protein MinD YP_004296031.1 3087861 D 153948 CDS YP_004296032.1 325983630 10299651 3088670..3088948 1 NC_015222.1 KEGG: neu:NE1829 cell division topological specificity factor MinE; TIGRFAM: Septum formation topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; cell division topological specificity factor MinE 3088948 10299651 NAL212_3108 Nitrosomonas sp. AL212 cell division topological specificity factor MinE YP_004296032.1 3088670 D 153948 CDS YP_004296033.1 325983631 10299652 3088973..3089680 1 NC_015222.1 TIGRFAM: Outer membrane lipoprotein LolB; HAMAP: Outer membrane lipoprotein LolB; KEGG: nmu:Nmul_A0587 outer membrane lipoprotein LolB; PFAM: Outer membrane lipoprotein LolB; outer-membrane lipoprotein lolB 3089680 10299652 NAL212_3109 Nitrosomonas sp. AL212 outer-membrane lipoprotein lolB YP_004296033.1 3088973 D 153948 CDS YP_004296034.1 325983632 10299653 3089717..3090556 1 NC_015222.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: nmu:Nmul_A0588 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 3090556 10299653 NAL212_3110 Nitrosomonas sp. AL212 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_004296034.1 3089717 D 153948 CDS YP_004296035.1 325983633 10299655 3090777..3091727 1 NC_015222.1 TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: neu:NE1826 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 3091727 10299655 NAL212_3111 Nitrosomonas sp. AL212 ribose-phosphate pyrophosphokinase YP_004296035.1 3090777 D 153948 CDS YP_004296036.1 325983634 10299656 3091787..3092407 1 NC_015222.1 KEGG: nmu:Nmul_A0590 50S ribosomal protein L25/general stress protein Ctc; TIGRFAM: Ribosomal protein L25, long-form; PFAM: Ribosomal protein L25, short-form; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 3092407 10299656 NAL212_3112 Nitrosomonas sp. AL212 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 YP_004296036.1 3091787 D 153948 CDS YP_004296037.1 325983635 10299657 3092549..3093118 1 NC_015222.1 TIGRFAM: Peptidyl-tRNA hydrolase; KEGG: nmu:Nmul_A0591 peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 3093118 10299657 NAL212_3113 Nitrosomonas sp. AL212 peptidyl-tRNA hydrolase YP_004296037.1 3092549 D 153948 CDS YP_004296038.1 325983636 10299658 3093175..3094266 1 NC_015222.1 KEGG: nmu:Nmul_A0592 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Domain of unknown function DUF933; GTP-binding protein, HSR1-related; GTP-binding protein YchF 3094266 10299658 NAL212_3114 Nitrosomonas sp. AL212 GTP-binding protein YchF YP_004296038.1 3093175 D 153948 CDS YP_004296039.1 325983637 10299659 3094399..3095505 1 NC_015222.1 PFAM: Filamentation induced by cAMP/death on curing-related; KEGG: shn:Shewana3_2962 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 3095505 10299659 NAL212_3115 Nitrosomonas sp. AL212 filamentation induced by cAMP protein fic YP_004296039.1 3094399 D 153948 CDS YP_004296040.1 325983638 10299660 complement(3095701..3097800) 1 NC_015222.1 PFAM: Domain of unknown function DUF262; KEGG: afe:Lferr_0290 hypothetical protein; hypothetical protein 3097800 10299660 NAL212_3116 Nitrosomonas sp. AL212 hypothetical protein YP_004296040.1 3095701 R 153948 CDS YP_004296041.1 325983639 10299661 complement(3097886..3100786) 1 NC_015222.1 KEGG: slo:Shew_0457 ATP-dependent helicase HepA; PFAM: RNA polymerase recycling, bacterial, C-terminal; Helicase, C-terminal; SNF2-related; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; RNA polymerase recycling-like protein 3100786 10299661 NAL212_3117 Nitrosomonas sp. AL212 RNA polymerase recycling-like protein YP_004296041.1 3097886 R 153948 CDS YP_004296042.1 325983640 10299662 complement(3101021..3101776) 1 NC_015222.1 PFAM: Protein of unknown function DUF2490; KEGG: neu:NE0571 hypothetical protein; hypothetical protein 3101776 10299662 NAL212_3118 Nitrosomonas sp. AL212 hypothetical protein YP_004296042.1 3101021 R 153948 CDS YP_004296043.1 325983641 10299663 complement(3101806..3102699) 1 NC_015222.1 KEGG: ppr:PBPRB1378 hypothetical protein; hypothetical protein 3102699 10299663 NAL212_3119 Nitrosomonas sp. AL212 hypothetical protein YP_004296043.1 3101806 R 153948 CDS YP_004296044.1 325983642 10299664 3103107..3103244 1 NC_015222.1 hypothetical protein 3103244 10299664 NAL212_3120 Nitrosomonas sp. AL212 hypothetical protein YP_004296044.1 3103107 D 153948 CDS YP_004296045.1 325983643 10299665 3103379..3103690 1 NC_015222.1 KEGG: nmu:Nmul_A0962 cytochrome c, class I; cytochrome c, class I 3103690 10299665 NAL212_3121 Nitrosomonas sp. AL212 cytochrome c, class I YP_004296045.1 3103379 D 153948 CDS YP_004296046.1 325983644 10299666 complement(3103771..3105216) 1 NC_015222.1 PFAM: HemN, C-terminal; KEGG: slt:Slit_0423 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; coproporphyrinogen dehydrogenase 3105216 10299666 NAL212_3122 Nitrosomonas sp. AL212 coproporphyrinogen dehydrogenase YP_004296046.1 3103771 R 153948 CDS YP_004296047.1 325983645 10299667 3105390..3106142 1 NC_015222.1 KEGG: net:Neut_2036 transcriptional regulator, Crp/Fnr family protein; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding domain; CarD family transcriptional regulator 3106142 10299667 NAL212_3123 Nitrosomonas sp. AL212 CarD family transcriptional regulator YP_004296047.1 3105390 D 153948 CDS YP_004296048.1 325983646 10299668 3106407..3107126 1 NC_015222.1 KEGG: nmu:Nmul_A0657 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2; 30S ribosomal protein S2 3107126 10299668 NAL212_3124 Nitrosomonas sp. AL212 30S ribosomal protein S2 YP_004296048.1 3106407 D 153948 CDS YP_004296049.1 325983647 10299669 3107169..3108053 1 NC_015222.1 KEGG: neu:NE1717 elongation factor Ts; TIGRFAM: Translation elongation factor EFTs/EF1B; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; translation elongation factor Ts 3108053 10299669 NAL212_3125 Nitrosomonas sp. AL212 translation elongation factor Ts YP_004296049.1 3107169 D 153948 CDS YP_004296050.1 325983648 10299670 3108087..3108803 1 NC_015222.1 KEGG: nmu:Nmul_A0659 uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; PFAM: Aspartate/glutamate/uridylate kinase; uridylate kinase 3108803 10299670 NAL212_3126 Nitrosomonas sp. AL212 uridylate kinase YP_004296050.1 3108087 D 153948 CDS YP_004296051.1 325983649 10299671 3108855..3109412 1 NC_015222.1 KEGG: neu:NE1715 ribosome recycling factor; TIGRFAM: Ribosome recycling factor; PFAM: Ribosome recycling factor; ribosome recycling factor 3109412 10299671 NAL212_3127 Nitrosomonas sp. AL212 ribosome recycling factor YP_004296051.1 3108855 D 153948 CDS YP_004296052.1 325983650 10299672 3109414..3110172 1 NC_015222.1 TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; KEGG: nmu:Nmul_A0661 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; UDP diphosphate synthase 3110172 10299672 NAL212_3128 Nitrosomonas sp. AL212 UDP diphosphate synthase YP_004296052.1 3109414 D 153948 CDS YP_004296053.1 325983651 10299673 3110184..3111008 1 NC_015222.1 PFAM: Phosphatidate cytidylyltransferase; KEGG: nmu:Nmul_A0662 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 3111008 10299673 NAL212_3129 Nitrosomonas sp. AL212 phosphatidate cytidylyltransferase YP_004296053.1 3110184 D 153948 CDS YP_004296054.1 325983652 10299674 3111005..3112192 1 NC_015222.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: net:Neut_2029 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3112192 10299674 NAL212_3130 Nitrosomonas sp. AL212 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_004296054.1 3111005 D 153948 CDS YP_004296055.1 325983653 10299675 3112348..3113715 1 NC_015222.1 KEGG: nmu:Nmul_A0664 peptidase M50, putative membrane-associated zinc metallopeptidase; TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase; PFAM: Peptidase M50; PDZ/DHR/GLGF; membrane-associated zinc metalloprotease 3113715 10299675 NAL212_3131 Nitrosomonas sp. AL212 membrane-associated zinc metalloprotease YP_004296055.1 3112348 D 153948 CDS YP_004296056.1 325983654 10299676 3113719..3116031 1 NC_015222.1 KEGG: net:Neut_2027 surface antigen (D15); TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; outer membrane protein assembly complex, YaeT protein 3116031 10299676 NAL212_3132 Nitrosomonas sp. AL212 outer membrane protein assembly complex, YaeT protein YP_004296056.1 3113719 D 153948 CDS YP_004296057.1 325983655 10299677 3116061..3116588 1 NC_015222.1 KEGG: net:Neut_2026 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 3116588 10299677 NAL212_3133 Nitrosomonas sp. AL212 outer membrane chaperone Skp YP_004296057.1 3116061 D 153948 CDS YP_004296058.1 325983656 10299678 3116662..3117108 1 NC_015222.1 KEGG: net:Neut_2025 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; 3-hydroxyacyl-ACP dehydratase 3117108 10299678 NAL212_3134 Nitrosomonas sp. AL212 3-hydroxyacyl-ACP dehydratase YP_004296058.1 3116662 D 153948 CDS YP_004296059.1 325983657 10299679 3117173..3117745 1 NC_015222.1 KEGG: nmu:Nmul_A0668 ribonuclease H; PFAM: Ribonuclease HII/HIII; ribonuclease H 3117745 10299679 NAL212_3135 Nitrosomonas sp. AL212 ribonuclease H YP_004296059.1 3117173 D 153948 CDS YP_004296060.1 325983658 10299680 3117892..3118371 1 NC_015222.1 PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: net:Neut_2023 FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase); FKBP-type peptidylprolyl isomerase 3118371 10299680 NAL212_3136 Nitrosomonas sp. AL212 FKBP-type peptidylprolyl isomerase YP_004296060.1 3117892 D 153948 CDS YP_004296061.1 325983659 10299681 complement(3118396..3120993) 1 NC_015222.1 TIGRFAM: DNA mismatch repair protein MutS, type 1; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp; KEGG: nmu:Nmul_A0670 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS 3120993 10299681 NAL212_3137 Nitrosomonas sp. AL212 DNA mismatch repair protein MutS YP_004296061.1 3118396 R 153948 CDS YP_004296062.1 325983660 10299683 complement(3121478..3122041) 1 NC_015222.1 PFAM: Cell wall hydrolase, SleB; KEGG: dba:Dbac_1158 cell wall hydrolase SleB; cell wall hydrolase SleB 3122041 10299683 NAL212_3139 Nitrosomonas sp. AL212 cell wall hydrolase SleB YP_004296062.1 3121478 R 153948 CDS YP_004296063.1 325983661 10299684 3122147..3122371 1 NC_015222.1 KEGG: ang:An11g07930 hypothetical protein; hypothetical protein 3122371 10299684 NAL212_3140 Nitrosomonas sp. AL212 hypothetical protein YP_004296063.1 3122147 D 153948 CDS YP_004296064.1 325983662 10299685 3122471..3122734 1 NC_015222.1 KEGG: neu:NE1119 hypothetical protein; hypothetical protein 3122734 10299685 NAL212_3141 Nitrosomonas sp. AL212 hypothetical protein YP_004296064.1 3122471 D 153948 CDS YP_004296065.1 325983663 10299686 complement(3122841..3123098) 1 NC_015222.1 KEGG: mno:Mnod_1082 hypothetical protein; hypothetical protein 3123098 10299686 NAL212_3142 Nitrosomonas sp. AL212 hypothetical protein YP_004296065.1 3122841 R 153948 CDS YP_004296066.1 325983664 10299687 complement(3124035..3124373) 1 NC_015222.1 KEGG: nmu:Nmul_A1518 hypothetical protein; hypothetical protein 3124373 10299687 NAL212_3143 Nitrosomonas sp. AL212 hypothetical protein YP_004296066.1 3124035 R 153948 CDS YP_004296067.1 325983665 10299688 3124628..3125059 1 NC_015222.1 KEGG: afw:Anae109_2950 signal transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; putative signal transduction protein with CBS domains 3125059 10299688 NAL212_3144 Nitrosomonas sp. AL212 putative signal transduction protein with CBS domains YP_004296067.1 3124628 D 153948 CDS YP_004296068.1 325983666 10299689 complement(3125133..3126749) 1 NC_015222.1 KEGG: amr:AM1_6172 IS5 family transposase; IS5 family transposase 3126749 10299689 NAL212_3145 Nitrosomonas sp. AL212 IS5 family transposase YP_004296068.1 3125133 R 153948 CDS YP_004296069.1 325983667 10299690 3126954..3127289 1 NC_015222.1 KEGG: ddi:DDB_G0295771 hypothetical protein; hypothetical protein 3127289 10299690 NAL212_3146 Nitrosomonas sp. AL212 hypothetical protein YP_004296069.1 3126954 D 153948 CDS YP_004296070.1 325983668 10299692 3127730..3128152 1 NC_015222.1 PFAM: Ferric-uptake regulator; KEGG: nmu:Nmul_A2512 ferric uptake regulator family protein; ferric uptake regulator, Fur family 3128152 10299692 NAL212_3147 Nitrosomonas sp. AL212 ferric uptake regulator, Fur family YP_004296070.1 3127730 D 153948 CDS YP_004296071.1 325983669 10299693 3128152..3128484 1 NC_015222.1 KEGG: nmu:Nmul_A2511 hypothetical protein; hypothetical protein 3128484 10299693 NAL212_3148 Nitrosomonas sp. AL212 hypothetical protein YP_004296071.1 3128152 D 153948 CDS YP_004296072.1 325983670 10299694 3128536..3128682 1 NC_015222.1 hypothetical protein 3128682 10299694 NAL212_3149 Nitrosomonas sp. AL212 hypothetical protein YP_004296072.1 3128536 D 153948 CDS YP_004296073.1 325983671 10299695 3128672..3130684 1 NC_015222.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: nmu:Nmul_A2510 TonB-dependent receptor; TonB-dependent receptor 3130684 10299695 NAL212_3150 Nitrosomonas sp. AL212 TonB-dependent receptor YP_004296073.1 3128672 D 153948 CDS YP_004296074.1 325983672 10299696 complement(3130830..3131351) 1 NC_015222.1 KEGG: nhl:Nhal_2121 hypothetical protein; hypothetical protein 3131351 10299696 NAL212_3151 Nitrosomonas sp. AL212 hypothetical protein YP_004296074.1 3130830 R 153948 CDS YP_004296075.1 325983673 10299697 complement(3131450..3131815) 1 NC_015222.1 KEGG: net:Neut_1871 hypothetical protein; hypothetical protein 3131815 10299697 NAL212_3152 Nitrosomonas sp. AL212 hypothetical protein YP_004296075.1 3131450 R 153948 CDS YP_004296076.1 325983674 10299698 3131939..3132775 1 NC_015222.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: neu:NE1215 short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 3132775 10299698 NAL212_3153 Nitrosomonas sp. AL212 short-chain dehydrogenase/reductase SDR YP_004296076.1 3131939 D 153948 CDS YP_004296077.1 325983675 10299699 complement(3132799..3133290) 1 NC_015222.1 KEGG: nmu:Nmul_A0103 hypothetical protein; hypothetical protein 3133290 10299699 NAL212_3154 Nitrosomonas sp. AL212 hypothetical protein YP_004296077.1 3132799 R 153948 CDS YP_004296078.1 325983676 10299700 complement(3133360..3133548) 1 NC_015222.1 PFAM: Protein of unknown function DUF3460; KEGG: net:Neut_1676 hypothetical protein; hypothetical protein 3133548 10299700 NAL212_3155 Nitrosomonas sp. AL212 hypothetical protein YP_004296078.1 3133360 R 153948 CDS YP_004296079.1 325983677 10299701 complement(3133607..3134581) 1 NC_015222.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: nmu:Nmul_A1026 hypothetical protein; ADP-ribosylation/Crystallin J1 3134581 10299701 NAL212_3156 Nitrosomonas sp. AL212 ADP-ribosylation/Crystallin J1 YP_004296079.1 3133607 R 153948 CDS YP_004296080.1 325983678 10299702 complement(3134596..3134778) 1 NC_015222.1 PFAM: Uncharacterised protein family UPF0434/Trm112; KEGG: net:Neut_2110 tetraacyldisaccharide 4'-kinase; hypothetical protein 3134778 10299702 NAL212_3157 Nitrosomonas sp. AL212 hypothetical protein YP_004296080.1 3134596 R 153948 CDS YP_004296081.1 325983679 10299703 complement(3134800..3135639) 1 NC_015222.1 TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: nmu:Nmul_A2767 ParB-like partition proteins; SMART: ParB-like nuclease; parB-like partition protein 3135639 10299703 NAL212_3158 Nitrosomonas sp. AL212 parB-like partition protein YP_004296081.1 3134800 R 153948 CDS YP_004296082.1 325983680 10299704 complement(3135735..3136499) 1 NC_015222.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: net:Neut_2435 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase 3136499 10299704 NAL212_3159 Nitrosomonas sp. AL212 Cobyrinic acid ac-diamide synthase YP_004296082.1 3135735 R 153948 CDS YP_004296083.1 325983681 10299705 complement(3136496..3137170) 1 NC_015222.1 KEGG: neu:NE2475 16S rRNA methyltransferase GidB; TIGRFAM: rRNA small subunit methyltransferase G; PFAM: rRNA small subunit methyltransferase G; methyltransferase GidB 3137170 10299705 NAL212_3160 Nitrosomonas sp. AL212 methyltransferase GidB YP_004296083.1 3136496 R 153948 CDS YP_004296084.1 325983682 10299706 complement(3137167..3139050) 1 NC_015222.1 KEGG: nmu:Nmul_A2770 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: Glucose-inhibited division protein A; PFAM: Glucose-inhibited division protein A-related; glucose inhibited division protein A 3139050 10299706 NAL212_3161 Nitrosomonas sp. AL212 glucose inhibited division protein A YP_004296084.1 3137167 R 153948 CDS YP_004296085.1 325983683 10299708 3140430..3141452 1 NC_015222.1 PFAM: Integrase, catalytic core; Resolvase, helix-turn-helix domain; KEGG: pst:PSPTO_B0040 ISPsy4, transposase; integrase catalytic region 3141452 10299708 NAL212_3163 Nitrosomonas sp. AL212 integrase catalytic region YP_004296085.1 3140430 D 153948 CDS YP_004296086.1 325983684 10299709 3141449..3142231 1 NC_015222.1 KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; IstB domain-containing protein ATP-binding protein 3142231 10299709 NAL212_3164 Nitrosomonas sp. AL212 IstB domain-containing protein ATP-binding protein YP_004296086.1 3141449 D 153948 CDS YP_004296087.1 325983685 10299711 complement(3143349..3143498) 1 NC_015222.1 KEGG: gca:Galf_2611 DNA-damage-inducible protein D; hypothetical protein 3143498 10299711 NAL212_3166 Nitrosomonas sp. AL212 hypothetical protein YP_004296087.1 3143349 R 153948 CDS YP_004296088.1 325983686 10299712 complement(3143498..3144493) 1 NC_015222.1 PFAM: Protein of unknown function DUF1016; KEGG: gpb:HDN1F_15170 protein of unknown function DUF1016; hypothetical protein 3144493 10299712 NAL212_3167 Nitrosomonas sp. AL212 hypothetical protein YP_004296088.1 3143498 R 153948 CDS YP_004296089.1 325983687 10299713 complement(3144490..3145752) 1 NC_015222.1 PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: paa:Paes_2397 restriction modification system DNA specificity domain; restriction modification system DNA specificity domain 3145752 10299713 NAL212_3168 Nitrosomonas sp. AL212 restriction modification system DNA specificity domain YP_004296089.1 3144490 R 153948 CDS YP_004296090.1 325983688 10299714 complement(3145755..3146360) 1 NC_015222.1 PFAM: Filamentation induced by cAMP/death on curing-related; KEGG: fph:Fphi_0614 mobilization/cell filamentation protein-like protein; filamentation induced by cAMP protein fic 3146360 10299714 NAL212_3169 Nitrosomonas sp. AL212 filamentation induced by cAMP protein fic YP_004296090.1 3145755 R 153948 CDS YP_004296091.1 325983689 10299715 complement(3146394..3150014) 1 NC_015222.1 TIGRFAM: Restriction endonuclease, type I, EcoRI, R subunit; PFAM: Type I restriction and modification enzyme, subunit R, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Transposase IS200-like; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; KEGG: pph:Ppha_0743 type I site-specific deoxyribonuclease, HsdR family; SMART: DEAD-like helicase, N-terminal; HsdR family type I site-specific deoxyribonuclease 3150014 10299715 NAL212_3170 Nitrosomonas sp. AL212 HsdR family type I site-specific deoxyribonuclease YP_004296091.1 3146394 R 153948 CDS YP_004296092.1 325983690 10299716 3150281..3151693 1 NC_015222.1 KEGG: nmu:Nmul_A0690 RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 3151693 10299716 NAL212_3171 Nitrosomonas sp. AL212 NodT family RND efflux system outer membrane lipoprotein YP_004296092.1 3150281 D 153948 CDS YP_004296093.1 325983691 10299717 3151736..3152293 1 NC_015222.1 PFAM: NADPH-dependent FMN reductase; KEGG: rfr:Rfer_2368 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 3152293 10299717 NAL212_3172 Nitrosomonas sp. AL212 NADPH-dependent FMN reductase YP_004296093.1 3151736 D 153948 CDS YP_004296094.1 325983692 10299718 3152336..3153577 1 NC_015222.1 KEGG: nmu:Nmul_A0689 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 3153577 10299718 NAL212_3173 Nitrosomonas sp. AL212 RND family efflux transporter MFP subunit YP_004296094.1 3152336 D 153948 CDS YP_004296095.1 325983693 10299719 3153574..3156774 1 NC_015222.1 KEGG: nmu:Nmul_A0688 hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3156774 10299719 NAL212_3174 Nitrosomonas sp. AL212 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004296095.1 3153574 D 153948 CDS YP_004296096.1 325983694 10299720 3156771..3157241 1 NC_015222.1 PFAM: Protein of unknown function DUF192; KEGG: rfr:Rfer_2763 hypothetical protein; hypothetical protein 3157241 10299720 NAL212_3175 Nitrosomonas sp. AL212 hypothetical protein YP_004296096.1 3156771 D 153948 CDS YP_004296097.1 325983695 10299721 complement(3157282..3158619) 1 NC_015222.1 KEGG: slt:Slit_2350 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 3158619 10299721 NAL212_3176 Nitrosomonas sp. AL212 DEAD/DEAH box helicase domain-containing protein YP_004296097.1 3157282 R 153948 CDS YP_004296098.1 325983696 10299722 3158831..3159976 1 NC_015222.1 PFAM: Methyltransferase small; KEGG: gca:Galf_2548 methyltransferase small; methyltransferase small 3159976 10299722 NAL212_3177 Nitrosomonas sp. AL212 methyltransferase small YP_004296098.1 3158831 D 153948 CDS YP_004296099.1 325983697 10299723 complement(3159989..3160318) 1 NC_015222.1 KEGG: phe:Phep_0928 MazG nucleotide pyrophosphohydrolase; MazG nucleotide pyrophosphohydrolase 3160318 10299723 NAL212_3178 Nitrosomonas sp. AL212 MazG nucleotide pyrophosphohydrolase YP_004296099.1 3159989 R 153948 CDS YP_004296100.1 325983698 10299724 complement(3160370..3161941) 1 NC_015222.1 KEGG: bid:Bind_2756 galactose oxidase; PFAM: Domain of unknown function DUF1929; Glyoxal oxidase, N-terminal; galactose oxidase 3161941 10299724 NAL212_3179 Nitrosomonas sp. AL212 galactose oxidase YP_004296100.1 3160370 R 153948 CDS YP_004296101.1 325983699 10299726 complement(3162627..3162821) 1 NC_015222.1 KEGG: ptm:GSPATT00027329001 hypothetical protein; hypothetical protein 3162821 10299726 NAL212_3181 Nitrosomonas sp. AL212 hypothetical protein YP_004296101.1 3162627 R 153948 CDS YP_004296102.1 325983700 10299727 complement(3162775..3164373) 1 NC_015222.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: bpd:BURPS668_0139 cytidine/deoxycytidylate deaminase family protein; CMP/dCMP deaminase zinc-binding protein 3164373 10299727 NAL212_3182 Nitrosomonas sp. AL212 CMP/dCMP deaminase zinc-binding protein YP_004296102.1 3162775 R 153948 CDS YP_004296103.1 325983701 10299728 complement(3164382..3166046) 1 NC_015222.1 TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter-like; KEGG: gca:Galf_2613 ABC transporter related; SMART: ATPase, AAA+ type, core; ChvD family ATP-binding protein 3166046 10299728 NAL212_3183 Nitrosomonas sp. AL212 ChvD family ATP-binding protein YP_004296103.1 3164382 R 153948 CDS YP_004296104.1 325983702 10299729 complement(3166156..3166383) 1 NC_015222.1 PFAM: Protein of unknown function DUF2835; KEGG: ote:Oter_1131 hypothetical protein; hypothetical protein 3166383 10299729 NAL212_3184 Nitrosomonas sp. AL212 hypothetical protein YP_004296104.1 3166156 R 153948 CDS YP_004296105.1 325983703 10299730 complement(3166415..3167155) 1 NC_015222.1 TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: bav:BAV1651 ribosomal large subunit pseudouridine synthase F (pseudouridylate synthase); SMART: RNA-binding S4; pseudouridine synthase Rsu 3167155 10299730 NAL212_3185 Nitrosomonas sp. AL212 pseudouridine synthase Rsu YP_004296105.1 3166415 R 153948 CDS YP_004296106.1 325983704 10299731 3167263..3167715 1 NC_015222.1 KEGG: nmu:Nmul_A2287 rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein 3167715 10299731 NAL212_3186 Nitrosomonas sp. AL212 rhodanese-like protein YP_004296106.1 3167263 D 153948 CDS YP_004296107.1 325983705 10299732 complement(3167770..3168594) 1 NC_015222.1 KEGG: nmu:Nmul_A2286 undecaprenyl pyrophosphate phosphatase; TIGRFAM: Bacitracin resistance protein BacA; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase 3168594 10299732 NAL212_3187 Nitrosomonas sp. AL212 undecaprenol kinase YP_004296107.1 3167770 R 153948 CDS YP_004296108.1 325983706 10299733 complement(3168640..3170535) 1 NC_015222.1 KEGG: nmu:Nmul_A2285 thiamine biosynthesis protein ThiC; TIGRFAM: Thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 3170535 10299733 NAL212_3188 Nitrosomonas sp. AL212 thiamine biosynthesis protein ThiC YP_004296108.1 3168640 R 153948 CDS YP_004296109.1 325983707 10299734 3170743..3171396 1 NC_015222.1 KEGG: net:Neut_0197 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 3171396 10299734 NAL212_3189 Nitrosomonas sp. AL212 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004296109.1 3170743 D 153948 CDS YP_004296110.1 325983708 10299735 3171485..3172840 1 NC_015222.1 KEGG: neu:NE0036 outer membrane efflux protein; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein; TolC family type I secretion outer membrane protein 3172840 10299735 NAL212_3190 Nitrosomonas sp. AL212 TolC family type I secretion outer membrane protein YP_004296110.1 3171485 D 153948 CDS YP_004296111.1 325983709 10299736 complement(3172889..3176296) 1 NC_015222.1 PFAM: Mechanosensitive ion channel MscS; KEGG: dac:Daci_2326 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 3176296 10299736 NAL212_3191 Nitrosomonas sp. AL212 mechanosensitive ion channel MscS YP_004296111.1 3172889 R 153948 CDS YP_004296112.1 325983710 10299738 3176936..3178324 1 NC_015222.1 TIGRFAM: Poly(A) polymerase, PcnB; KEGG: nmu:Nmul_A0882 poly(A) polymerase; PFAM: Poly A polymerase, head domain; poly(A) polymerase 3178324 10299738 NAL212_3192 Nitrosomonas sp. AL212 poly(A) polymerase YP_004296112.1 3176936 D 153948 CDS YP_004296113.1 325983711 10299739 3178343..3178831 1 NC_015222.1 TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: nmu:Nmul_A0881 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3178831 10299739 NAL212_3193 Nitrosomonas sp. AL212 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_004296113.1 3178343 D 153948 CDS YP_004296114.1 325983712 10299740 3178886..3179677 1 NC_015222.1 TIGRFAM: Ketopantoate hydroxymethyltransferase; KEGG: net:Neut_2293 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3179677 10299740 NAL212_3194 Nitrosomonas sp. AL212 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_004296114.1 3178886 D 153948 CDS YP_004296115.1 325983713 10299741 3179692..3180516 1 NC_015222.1 PFAM: Pantoate-beta-alanine ligase; manually curated; TIGRFAM: Pantoate-beta-alanine ligase; Cytidyltransferase-related; KEGG: nmu:Nmul_A0878 pantoate--beta-alanine ligase; HAMAP: Pantoate-beta-alanine ligase; pantothenate synthetase 3180516 10299741 NAL212_3195 Nitrosomonas sp. AL212 pantothenate synthetase YP_004296115.1 3179692 D 153948 CDS YP_004296116.1 325983715 10299836 complement(82..1317) 1 NC_015223.1 TIGRFAM: Secretion protein HlyD; KEGG: gfo:GFO_1187 HlyD family secretion protein; RND family efflux transporter MFP subunit 1317 10299836 NAL212_0001 Nitrosomonas sp. AL212 RND family efflux transporter MFP subunit YP_004296116.1 82 R 153948 CDS YP_004296117.1 325983716 10299744 complement(1343..5770) 1 NC_015223.1 KEGG: gfo:GFO_1186 AcrB/AcrD/AcrF family heavy metal cation efflux protein; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; Outer membrane efflux protein; CzcA family heavy metal efflux pump 5770 10299744 NAL212_0002 Nitrosomonas sp. AL212 CzcA family heavy metal efflux pump YP_004296117.1 1343 R 153948 CDS YP_004296118.1 325983717 10299745 complement(5953..6318) 1 NC_015223.1 KEGG: nmu:Nmul_A2105 hypothetical protein; hypothetical protein 6318 10299745 NAL212_0003 Nitrosomonas sp. AL212 hypothetical protein YP_004296118.1 5953 R 153948 CDS YP_004296119.1 325983718 10299746 complement(6673..7683) 1 NC_015223.1 PFAM: Bile acid:sodium symporter; KEGG: bbe:BBR47_37520 hypothetical protein; bile acid:sodium symporter 7683 10299746 NAL212_0004 Nitrosomonas sp. AL212 bile acid:sodium symporter YP_004296119.1 6673 R 153948 CDS YP_004296120.1 325983719 10299747 7881..8801 1 NC_015223.1 KEGG: tcx:Tcr_1014 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter 8801 10299747 NAL212_0005 Nitrosomonas sp. AL212 cation diffusion facilitator family transporter YP_004296120.1 7881 D 153948 CDS YP_004296121.1 325983720 10299748 8902..9129 1 NC_015223.1 manually curated; KEGG: svo:SVI_3236 hypothetical protein; hypothetical protein 9129 10299748 NAL212_0006 Nitrosomonas sp. AL212 hypothetical protein YP_004296121.1 8902 D 153948 CDS YP_004296122.1 325983721 10299749 9682..10482 1 NC_015223.1 KEGG: pol:Bpro_2506 hypothetical protein; hypothetical protein 10482 10299749 NAL212_0007 Nitrosomonas sp. AL212 hypothetical protein YP_004296122.1 9682 D 153948 CDS YP_004296123.1 325983722 10299750 10509..10859 1 NC_015223.1 KEGG: pol:Bpro_2507 hypothetical protein; hypothetical protein 10859 10299750 NAL212_0008 Nitrosomonas sp. AL212 hypothetical protein YP_004296123.1 10509 D 153948 CDS YP_004296124.1 325983723 10299751 complement(10927..11277) 1 NC_015223.1 KEGG: slt:Slit_2112 hypothetical protein; hypothetical protein 11277 10299751 NAL212_0009 Nitrosomonas sp. AL212 hypothetical protein YP_004296124.1 10927 R 153948 CDS YP_004296125.1 325983724 10299829 11675..12451 1 NC_015223.1 KEGG: bja:bll4865 putative carbonic anhydrase; PFAM: Carbonic anhydrase; SMART: Carbonic anhydrase; carbonic anhydrase 12451 10299829 NAL212_0011 Nitrosomonas sp. AL212 carbonic anhydrase YP_004296125.1 11675 D 153948 CDS YP_004296126.1 325983725 10299830 12831..13508 1 NC_015223.1 KEGG: rmr:Rmar_2140 transposase-like protein; transposase-like protein 13508 10299830 NAL212_0013 Nitrosomonas sp. AL212 transposase-like protein YP_004296126.1 12831 D 153948 CDS YP_004296127.1 325983726 10299754 complement(14755..17979) 1 NC_015223.1 KEGG: nmu:Nmul_A2108 heavy metal efflux pump CzcA; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; CzcA family heavy metal efflux pump 17979 10299754 NAL212_0014 Nitrosomonas sp. AL212 CzcA family heavy metal efflux pump YP_004296127.1 14755 R 153948 CDS YP_004296128.1 325983727 10299755 complement(18009..19544) 1 NC_015223.1 TIGRFAM: Secretion protein HlyD; KEGG: nmu:Nmul_A2107 secretion protein HlyD; RND family efflux transporter MFP subunit 19544 10299755 NAL212_0015 Nitrosomonas sp. AL212 RND family efflux transporter MFP subunit YP_004296128.1 18009 R 153948 CDS YP_004296129.1 325983728 10299756 complement(19569..20996) 1 NC_015223.1 PFAM: Outer membrane efflux protein; KEGG: nmu:Nmul_A2106 outer membrane efflux protein; outer membrane efflux protein 20996 10299756 NAL212_0016 Nitrosomonas sp. AL212 outer membrane efflux protein YP_004296129.1 19569 R 153948 CDS YP_004296130.1 325983729 10299757 complement(21119..21487) 1 NC_015223.1 KEGG: nmu:Nmul_A2105 hypothetical protein; hypothetical protein 21487 10299757 NAL212_0017 Nitrosomonas sp. AL212 hypothetical protein YP_004296130.1 21119 R 153948 CDS YP_004296131.1 325983730 10299758 21977..22726 1 NC_015223.1 KEGG: neu:NE2376 hypothetical protein; hypothetical protein 22726 10299758 NAL212_0018 Nitrosomonas sp. AL212 hypothetical protein YP_004296131.1 21977 D 153948 CDS YP_004296132.1 325983731 10299759 22931..23392 1 NC_015223.1 KEGG: noc:Noc_1222 hypothetical protein; hypothetical protein 23392 10299759 NAL212_0019 Nitrosomonas sp. AL212 hypothetical protein YP_004296132.1 22931 D 153948 CDS YP_004296133.1 325983732 10299760 23484..24023 1 NC_015223.1 PFAM: Redoxin; KEGG: nwa:Nwat_1110 redoxin domain-containing protein; redoxin domain-containing protein 24023 10299760 NAL212_0020 Nitrosomonas sp. AL212 redoxin domain-containing protein YP_004296133.1 23484 D 153948 CDS YP_004296134.1 325983733 10299761 24054..24287 1 NC_015223.1 KEGG: nhl:Nhal_2590 arginine decarboxylase; arginine decarboxylase 24287 10299761 NAL212_0021 Nitrosomonas sp. AL212 arginine decarboxylase YP_004296134.1 24054 D 153948 CDS YP_004296135.1 325983734 10299762 24340..27045 1 NC_015223.1 PFAM: Protein of unknown function DUF3570; KEGG: nhl:Nhal_2591 hypothetical protein; hypothetical protein 27045 10299762 NAL212_0022 Nitrosomonas sp. AL212 hypothetical protein YP_004296135.1 24340 D 153948 CDS YP_004296136.1 325983735 10299831 complement(28776..29195) 1 NC_015223.1 KEGG: slt:Slit_0565 flagellar basal-body rod protein FlgB; TIGRFAM: Flagellar basal-body rod protein FlgB; PFAM: Flagellar basal body rod protein, N-terminal; flagellar basal-body rod protein FlgB 29195 10299831 NAL212_0024 Nitrosomonas sp. AL212 flagellar basal-body rod protein FlgB YP_004296136.1 28776 R 153948 CDS YP_004296137.1 325983736 10299764 complement(29483..29923) 1 NC_015223.1 PFAM: Lytic transglycosylase-like, catalytic; KEGG: axy:AXYL_06548 transglycosylase SLT domain-containing protein 6; Lytic transglycosylase catalytic 29923 10299764 NAL212_0025 Nitrosomonas sp. AL212 Lytic transglycosylase catalytic YP_004296137.1 29483 R 153948 CDS YP_004296138.1 325983737 10299765 complement(29955..31043) 1 NC_015223.1 TIGRFAM: Conjugal transfer, TrbL; KEGG: pau:PA14_15540 putative mating pair formation protein TrbL; P-type conjugative transfer protein TrbL 31043 10299765 NAL212_0026 Nitrosomonas sp. AL212 P-type conjugative transfer protein TrbL YP_004296138.1 29955 R 153948 CDS YP_004296139.1 325983738 10299766 complement(31076..31267) 1 NC_015223.1 KEGG: bpf:BpOF4_14260 ABC transporter (substrate-binding protein); hypothetical protein 31267 10299766 NAL212_0027 Nitrosomonas sp. AL212 hypothetical protein YP_004296139.1 31076 R 153948 CDS YP_004296140.1 325983739 10299767 complement(31291..32091) 1 NC_015223.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: axy:AXYL_06544 P-type conjugative transfer protein TrbJ; P-type conjugative transfer protein TrbJ 32091 10299767 NAL212_0028 Nitrosomonas sp. AL212 P-type conjugative transfer protein TrbJ YP_004296140.1 31291 R 153948 CDS YP_004296141.1 325983740 10299768 complement(32109..33521) 1 NC_015223.1 PFAM: Type IV secretion system, VirB10 / TraB / TrbI; KEGG: bam:Bamb_6628 conjugal transfer protein TrbI; conjugation TrbI family protein 33521 10299768 NAL212_0029 Nitrosomonas sp. AL212 conjugation TrbI family protein YP_004296141.1 32109 R 153948 CDS YP_004296142.1 325983741 10299769 complement(33534..34031) 1 NC_015223.1 PFAM: Conjugal transfer, TrbH; KEGG: app:CAP2UW1_4726 conjugal transfer protein TrbH; Conjugal transfer TrbH family protein 34031 10299769 NAL212_0030 Nitrosomonas sp. AL212 Conjugal transfer TrbH family protein YP_004296142.1 33534 R 153948 CDS YP_004296143.1 325983742 10299770 complement(34034..34942) 1 NC_015223.1 KEGG: axy:AXYL_06541 P-type conjugative transfer protein TrbG; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer, TrbG/VirB9/CagX; P-type conjugative transfer protein TrbG 34942 10299770 NAL212_0031 Nitrosomonas sp. AL212 P-type conjugative transfer protein TrbG YP_004296143.1 34034 R 153948 CDS YP_004296144.1 325983743 10299771 complement(34957..35733) 1 NC_015223.1 PFAM: VirB8; KEGG: app:CAP2UW1_4728 conjugal transfer protein TrbF; VirB8 family protein 35733 10299771 NAL212_0032 Nitrosomonas sp. AL212 VirB8 family protein YP_004296144.1 34957 R 153948 CDS YP_004296145.1 325983744 10299772 complement(35733..38267) 1 NC_015223.1 TIGRFAM: CagE, TrbE, VirB component of type IV transporter system; PFAM: CagE, TrbE, VirB component of type IV transporter system, central domain; KEGG: eba:p2B4 conjugal transfer protein TrbE; SMART: ATPase, AAA+ type, core; type IV secretion/conjugal transfer ATPase 38267 10299772 NAL212_0033 Nitrosomonas sp. AL212 type IV secretion/conjugal transfer ATPase YP_004296145.1 35733 R 153948 CDS YP_004296146.1 325983745 10299773 complement(38264..38575) 1 NC_015223.1 PFAM: Type IV secretion system, VirB3 / TrbD / AvhB; KEGG: ajs:Ajs_4272 conjugal transfer protein TrbD; type IV secretory pathway VirB3 family protein 38575 10299773 NAL212_0034 Nitrosomonas sp. AL212 type IV secretory pathway VirB3 family protein YP_004296146.1 38264 R 153948 CDS YP_004296147.1 325983746 10299774 complement(38595..38990) 1 NC_015223.1 PFAM: Conjugal transfer,TrbC; KEGG: bam:Bamb_6634 conjugal transfer protein TrbC; conjugal transfer protein Trbc 38990 10299774 NAL212_0035 Nitrosomonas sp. AL212 conjugal transfer protein Trbc YP_004296147.1 38595 R 153948 CDS YP_004296148.1 325983747 10299775 complement(39012..39971) 1 NC_015223.1 TIGRFAM: ATPase, P-type conjugative transfer, TrbB; PFAM: Type II secretion system protein E; KEGG: llo:LLO_2875 LvhB11; SMART: ATPase, AAA+ type, core; P-type conjugative transfer ATPase TrbB 39971 10299775 NAL212_0036 Nitrosomonas sp. AL212 P-type conjugative transfer ATPase TrbB YP_004296148.1 39012 R 153948 CDS YP_004296149.1 325983748 10299776 complement(40058..40420) 1 NC_015223.1 KEGG: app:CAP2UW1_4733 conjugal transfer protein TrbA; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 40420 10299776 NAL212_0037 Nitrosomonas sp. AL212 helix-turn-helix domain-containing protein YP_004296149.1 40058 R 153948 CDS YP_004296150.1 325983749 10299777 40849..41913 1 NC_015223.1 TIGRFAM: ParB-like partition protein; PFAM: Transcriptional repressor protein, KorB; ParB-like nuclease; KEGG: axy:AXYL_06612 transcriptional repressor protein KorB; SMART: ParB-like nuclease; parB-like partition protein 41913 10299777 NAL212_0038 Nitrosomonas sp. AL212 parB-like partition protein YP_004296150.1 40849 D 153948 CDS YP_004296151.1 325983750 10299778 41910..42275 1 NC_015223.1 KEGG: eba:p2A235 putative conjugation protein TraO; putative conjugation protein TraO 42275 10299778 NAL212_0039 Nitrosomonas sp. AL212 putative conjugation protein TraO YP_004296151.1 41910 D 153948 CDS YP_004296152.1 325983751 10299779 42481..42606 1 NC_015223.1 hypothetical protein 42606 10299779 NAL212_0040 Nitrosomonas sp. AL212 hypothetical protein YP_004296152.1 42481 D 153948 CDS YP_004296153.1 325983752 10299780 complement(42787..44199) 1 NC_015223.1 KEGG: cpy:Cphy_1686 hypothetical protein; hypothetical protein 44199 10299780 NAL212_0041 Nitrosomonas sp. AL212 hypothetical protein YP_004296153.1 42787 R 153948 CDS YP_004296154.1 325983753 10299781 complement(44343..44927) 1 NC_015223.1 KEGG: swd:Swoo_1074 cytochrome c, class I; cytochrome c, class I 44927 10299781 NAL212_0042 Nitrosomonas sp. AL212 cytochrome c, class I YP_004296154.1 44343 R 153948 CDS YP_004296155.1 325983754 10299782 complement(44927..45517) 1 NC_015223.1 KEGG: swd:Swoo_1073 cytochrome P460; cytochrome P460 45517 10299782 NAL212_0043 Nitrosomonas sp. AL212 cytochrome P460 YP_004296155.1 44927 R 153948 CDS YP_004296156.1 325983755 10299783 45752..46648 1 NC_015223.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: plm:Plim_1664 LysR substrate-binding protein; LysR family transcriptional regulator 46648 10299783 NAL212_0044 Nitrosomonas sp. AL212 LysR family transcriptional regulator YP_004296156.1 45752 D 153948 CDS YP_004296157.1 325983756 10299784 complement(46671..47024) 1 NC_015223.1 KEGG: nmu:Nmul_B2811 hypothetical protein; hypothetical protein 47024 10299784 NAL212_0045 Nitrosomonas sp. AL212 hypothetical protein YP_004296157.1 46671 R 153948 CDS YP_004296158.1 325983757 10299785 complement(47017..47709) 1 NC_015223.1 KEGG: nmu:Nmul_B2810 ParA protein, putative; ParA protein 47709 10299785 NAL212_0046 Nitrosomonas sp. AL212 ParA protein YP_004296158.1 47017 R 153948 CDS YP_004296159.1 325983758 10299833 complement(51650..52765) 1 NC_015223.1 KEGG: nmu:Nmul_B2812 hypothetical protein; hypothetical protein 52765 10299833 NAL212_0049 Nitrosomonas sp. AL212 hypothetical protein YP_004296159.1 51650 R 153948 CDS YP_004296160.1 325983759 10299787 complement(52808..53251) 1 NC_015223.1 KEGG: llo:LLO_2896 TraM protein; TraM protein 53251 10299787 NAL212_0050 Nitrosomonas sp. AL212 TraM protein YP_004296160.1 52808 R 153948 CDS YP_004296161.1 325983760 10299788 complement(53248..53979) 1 NC_015223.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: reu:Reut_D6529 conjugal transfer protein TraL; Cobyrinic acid ac-diamide synthase 53979 10299788 NAL212_0051 Nitrosomonas sp. AL212 Cobyrinic acid ac-diamide synthase YP_004296161.1 53248 R 153948 CDS YP_004296162.1 325983761 10299789 complement(53979..54320) 1 NC_015223.1 KEGG: xfn:XfasM23_2251 hypothetical protein; hypothetical protein 54320 10299789 NAL212_0052 Nitrosomonas sp. AL212 hypothetical protein YP_004296162.1 53979 R 153948 CDS YP_004296163.1 325983762 10299790 54690..55043 1 NC_015223.1 KEGG: bcj:BCAL0172 conjugal transfer relaxosome component TraJ; conjugal transfer relaxosome component TraJ 55043 10299790 NAL212_0053 Nitrosomonas sp. AL212 conjugal transfer relaxosome component TraJ YP_004296163.1 54690 D 153948 CDS YP_004296164.1 325983763 10299791 55059..56684 1 NC_015223.1 PFAM: Endonuclease relaxase, MobA/VirD2; KEGG: app:CAP2UW1_4640 conjugal transfer relaxase TraI; Relaxase/mobilization nuclease family protein 56684 10299791 NAL212_0054 Nitrosomonas sp. AL212 Relaxase/mobilization nuclease family protein YP_004296164.1 55059 D 153948 CDS YP_004296165.1 325983764 10299792 56684..58552 1 NC_015223.1 PFAM: Ti-type conjugative transfer system, TraG-like; KEGG: app:CAP2UW1_4641 conjugal transfer coupling protein TraG; TRAG family protein 58552 10299792 NAL212_0055 Nitrosomonas sp. AL212 TRAG family protein YP_004296165.1 56684 D 153948 CDS YP_004296166.1 325983765 10299793 58549..59088 1 NC_015223.1 KEGG: bam:Bamb_6613 conjugal transfer peptidase TraF; TIGRFAM: Peptidase S26C, conjugative transfer signal peptidase TraF; PFAM: Peptidase S26, conserved region; conjugative transfer signal peptidase TraF 59088 10299793 NAL212_0056 Nitrosomonas sp. AL212 conjugative transfer signal peptidase TraF YP_004296166.1 58549 D 153948 CDS YP_004296167.1 325983766 10299794 59114..59332 1 NC_015223.1 KEGG: xfn:XfasM23_2245 conjugal transfer protein; conjugal transfer protein 59332 10299794 NAL212_0057 Nitrosomonas sp. AL212 conjugal transfer protein YP_004296167.1 59114 D 153948 CDS YP_004296168.1 325983767 10299795 59319..62231 1 NC_015223.1 KEGG: app:CAP2UW1_4644 hypothetical protein; PFAM: Domain of unknown function DUF1738; Toprim domain; SMART: Toprim domain; hypothetical protein 62231 10299795 NAL212_0058 Nitrosomonas sp. AL212 hypothetical protein YP_004296168.1 59319 D 153948 CDS YP_004296169.1 325983768 10299796 62365..62745 1 NC_015223.1 KEGG: vei:Veis_4707 hypothetical protein; hypothetical protein 62745 10299796 NAL212_0059 Nitrosomonas sp. AL212 hypothetical protein YP_004296169.1 62365 D 153948 CDS YP_004296170.1 325983769 10299797 62732..63046 1 NC_015223.1 KEGG: ana:all1719 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; XRE family transcriptional regulator 63046 10299797 NAL212_0060 Nitrosomonas sp. AL212 XRE family transcriptional regulator YP_004296170.1 62732 D 153948 CDS YP_004296171.1 325983770 10299798 63103..63408 1 NC_015223.1 KEGG: mfa:Mfla_0534 hypothetical protein; hypothetical protein 63408 10299798 NAL212_0061 Nitrosomonas sp. AL212 hypothetical protein YP_004296171.1 63103 D 153948 CDS YP_004296172.1 325983771 10299799 complement(63429..65012) 1 NC_015223.1 PFAM: Transposase, IS66; KEGG: gca:Galf_2413 transposase; transposase IS66 65012 10299799 NAL212_0062 Nitrosomonas sp. AL212 transposase IS66 YP_004296172.1 63429 R 153948 CDS YP_004296173.1 325983772 10299800 complement(65066..65416) 1 NC_015223.1 KEGG: eba:ebB55 transposase, fragment; manually curated; PFAM: Transposase (putative), IS66 Orf2-like; IS66 Orf2 family protein 65416 10299800 NAL212_0063 Nitrosomonas sp. AL212 IS66 Orf2 family protein YP_004296173.1 65066 R 153948 CDS YP_004296174.1 325983773 10299801 complement(65404..65700) 1 NC_015223.1 KEGG: dat:HRM2_44620 hypothetical protein; hypothetical protein 65700 10299801 NAL212_0064 Nitrosomonas sp. AL212 hypothetical protein YP_004296174.1 65404 R 153948 CDS YP_004296175.1 325983774 10299802 complement(65985..69602) 1 NC_015223.1 KEGG: ret:RHE_PF00102 putative DNA helicase protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 69602 10299802 NAL212_0065 Nitrosomonas sp. AL212 DEAD/DEAH box helicase domain-containing protein YP_004296175.1 65985 R 153948 CDS YP_004296176.1 325983775 10299803 complement(69605..70549) 1 NC_015223.1 KEGG: ret:RHE_PF00101 putative aminotransferase protein; putative aminotransferase protein 70549 10299803 NAL212_0066 Nitrosomonas sp. AL212 putative aminotransferase protein YP_004296176.1 69605 R 153948 CDS YP_004296177.1 325983776 10299804 complement(70864..71145) 1 NC_015223.1 KEGG: cpc:Cpar_1878 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; histone family protein DNA-binding protein 71145 10299804 NAL212_0067 Nitrosomonas sp. AL212 histone family protein DNA-binding protein YP_004296177.1 70864 R 153948 CDS YP_004296178.1 325983777 10299805 71356..71820 1 NC_015223.1 KEGG: net:Neut_2558 hypothetical protein; hypothetical protein 71820 10299805 NAL212_0068 Nitrosomonas sp. AL212 hypothetical protein YP_004296178.1 71356 D 153948 CDS YP_004296179.1 325983778 10299806 72507..73718 1 NC_015223.1 PFAM: Domain of unknown function DUF262; KEGG: swd:Swoo_0706 hypothetical protein; hypothetical protein 73718 10299806 NAL212_0069 Nitrosomonas sp. AL212 hypothetical protein YP_004296179.1 72507 D 153948 CDS YP_004296180.1 325983779 10299807 73711..74775 1 NC_015223.1 PFAM: Domain of unknown function DUF3696, C-terminal; KEGG: vex:VEA_001831 hypothetical protein; hypothetical protein 74775 10299807 NAL212_0070 Nitrosomonas sp. AL212 hypothetical protein YP_004296180.1 73711 D 153948 CDS YP_004296181.1 325983780 10299808 74777..75613 1 NC_015223.1 KEGG: bfr:BF1768 hypothetical protein; hypothetical protein 75613 10299808 NAL212_0071 Nitrosomonas sp. AL212 hypothetical protein YP_004296181.1 74777 D 153948 CDS YP_004296182.1 325983781 10299809 complement(75665..76855) 1 NC_015223.1 KEGG: gbe:GbCGDNIH1_1519 putative cytoplasmic protein; PFAM: Bacteriophage T5, ORF172 DNA-binding; SMART: Bacteriophage T5, ORF172 DNA-binding; helicase A859L 76855 10299809 NAL212_0072 Nitrosomonas sp. AL212 helicase A859L YP_004296182.1 75665 R 153948 CDS YP_004296183.1 325983782 10299810 complement(76848..78899) 1 NC_015223.1 PFAM: Helicase, C-terminal; KEGG: ajs:Ajs_2529 hypothetical protein; helicase domain-containing protein 78899 10299810 NAL212_0073 Nitrosomonas sp. AL212 helicase domain-containing protein YP_004296183.1 76848 R 153948 CDS YP_004296184.1 325983783 10299811 complement(78896..81673) 1 NC_015223.1 KEGG: tin:Tint_1545 putative DNA methylase; putative DNA methylase 81673 10299811 NAL212_0074 Nitrosomonas sp. AL212 putative DNA methylase YP_004296184.1 78896 R 153948 CDS YP_004296185.1 325983784 10299812 complement(81714..82172) 1 NC_015223.1 PFAM: Protein of unknown function DUF1917; KEGG: mem:Memar_2250 hypothetical protein; hypothetical protein 82172 10299812 NAL212_0075 Nitrosomonas sp. AL212 hypothetical protein YP_004296185.1 81714 R 153948 CDS YP_004296186.1 325983785 10299813 complement(82373..82714) 1 NC_015223.1 PFAM: PemK-like protein; KEGG: neu:NE1181 PemK-like protein; transcriptional modulator of MazE/toxin MazF 82714 10299813 NAL212_0076 Nitrosomonas sp. AL212 transcriptional modulator of MazE/toxin MazF YP_004296186.1 82373 R 153948 CDS YP_004296187.1 325983786 10299814 complement(82707..82937) 1 NC_015223.1 KEGG: neu:NE1182 CopG family protein; CopG family protein 82937 10299814 NAL212_0077 Nitrosomonas sp. AL212 CopG family protein YP_004296187.1 82707 R 153948 CDS YP_004296188.1 325983787 10299815 83180..83476 1 NC_015223.1 KEGG: dat:HRM2_09780 hypothetical protein; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Uncharacterised protein family UPF0156/MetJ /Arc repressor; addiction module antidote protein 83476 10299815 NAL212_0078 Nitrosomonas sp. AL212 addiction module antidote protein YP_004296188.1 83180 D 153948 CDS YP_004296189.1 325983788 10299816 83463..83810 1 NC_015223.1 PFAM: Plasmid stabilisation system; KEGG: dat:HRM2_09770 hypothetical protein; plasmid stabilization system 83810 10299816 NAL212_0079 Nitrosomonas sp. AL212 plasmid stabilization system YP_004296189.1 83463 D 153948 CDS YP_004296190.1 325983789 10299817 83812..84762 1 NC_015223.1 PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: app:CAP2UW1_4555 integrase family protein; integrase family protein 84762 10299817 NAL212_0080 Nitrosomonas sp. AL212 integrase family protein YP_004296190.1 83812 D 153948 CDS YP_004296191.1 325983790 10299818 complement(85148..86434) 1 NC_015223.1 KEGG: dia:Dtpsy_2137 arsenical pump membrane protein; TIGRFAM: Arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; arsenical pump membrane protein 86434 10299818 NAL212_0081 Nitrosomonas sp. AL212 arsenical pump membrane protein YP_004296191.1 85148 R 153948 CDS YP_004296192.1 325983791 10299819 complement(86493..86975) 1 NC_015223.1 KEGG: psa:PST_0240 arsenate reductase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase 86975 10299819 NAL212_0082 Nitrosomonas sp. AL212 protein tyrosine phosphatase YP_004296192.1 86493 R 153948 CDS YP_004296193.1 325983792 10299820 complement(86978..87397) 1 NC_015223.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bte:BTH_II0960 glyoxalase family protein family; glyoxalase/bleomycin resistance protein/dioxygenase 87397 10299820 NAL212_0083 Nitrosomonas sp. AL212 glyoxalase/bleomycin resistance protein/dioxygenase YP_004296193.1 86978 R 153948 CDS YP_004296194.1 325983793 10299821 complement(87442..87771) 1 NC_015223.1 KEGG: bcj:BCAM0233 ArsR family regulatory protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; ArsR family transcriptional regulator 87771 10299821 NAL212_0084 Nitrosomonas sp. AL212 ArsR family transcriptional regulator YP_004296194.1 87442 R 153948 CDS YP_004296195.1 325983794 10299822 88033..88356 1 NC_015223.1 KEGG: har:HEAR1579 hypothetical protein; hypothetical protein 88356 10299822 NAL212_0085 Nitrosomonas sp. AL212 hypothetical protein YP_004296195.1 88033 D 153948 CDS YP_004296196.1 325983795 10299823 88586..88942 1 NC_015223.1 KEGG: nmu:Nmul_A1630 hypothetical protein; hypothetical protein 88942 10299823 NAL212_0086 Nitrosomonas sp. AL212 hypothetical protein YP_004296196.1 88586 D 153948 CDS YP_004296197.1 325983796 10299824 89037..89357 1 NC_015223.1 PFAM: Copper binding periplasmic protein CusF; KEGG: rfr:Rfer_0412 secretion protein HlyD; copper binding periplasmic protein cusF 89357 10299824 NAL212_0087 Nitrosomonas sp. AL212 copper binding periplasmic protein cusF YP_004296197.1 89037 D 153948 CDS YP_004296198.1 325983797 10299834 89772..90626 1 NC_015223.1 PFAM: Fatty acid hydroxylase; KEGG: gca:Galf_1902 fatty acid hydroxylase; fatty acid hydroxylase 90626 10299834 NAL212_0089 Nitrosomonas sp. AL212 fatty acid hydroxylase YP_004296198.1 89772 D 153948 CDS YP_004296199.1 325983798 10299835 91101..91715 1 NC_015223.1 PFAM: Methyltransferase type 11; KEGG: gca:Galf_2172 methyltransferase type 12; type 11 methyltransferase 91715 10299835 NAL212_0091 Nitrosomonas sp. AL212 type 11 methyltransferase YP_004296199.1 91101 D 153948 CDS YP_004296200.1 325983799 10299827 complement(91748..92155) 1 NC_015223.1 KEGG: nmu:Nmul_A0152 proline-rich region; proline-rich region 92155 10299827 NAL212_0092 Nitrosomonas sp. AL212 proline-rich region YP_004296200.1 91748 R 153948 CDS YP_004296201.1 325983800 10299828 complement(92155..92271) 1 NC_015223.1 hypothetical protein 92271 10299828 NAL212_0093 Nitrosomonas sp. AL212 hypothetical protein YP_004296201.1 92155 R 153948 CDS